Query 017201
Match_columns 375
No_of_seqs 130 out of 1498
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 06:29:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017201.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017201hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 5E-68 1.1E-72 481.3 32.3 333 6-375 1-337 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 5E-66 1.1E-70 457.9 32.8 362 7-375 1-366 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.3E-65 2.8E-70 447.8 33.4 369 4-375 3-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.2E-60 2.6E-65 419.9 31.2 339 8-374 4-351 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 2.6E-60 5.7E-65 416.6 30.8 347 1-375 1-354 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.6E-55 3.4E-60 420.3 36.1 359 9-373 1-370 (371)
7 PLN02740 Alcohol dehydrogenase 100.0 2.8E-55 6E-60 419.7 35.6 369 4-375 6-381 (381)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 6.3E-55 1.4E-59 414.2 35.6 356 8-375 1-358 (358)
9 TIGR02818 adh_III_F_hyde S-(hy 100.0 6.6E-55 1.4E-59 415.3 35.7 364 9-375 2-368 (368)
10 cd08300 alcohol_DH_class_III c 100.0 1.8E-54 3.9E-59 412.5 36.7 365 7-374 1-368 (368)
11 cd08301 alcohol_DH_plants Plan 100.0 7.2E-54 1.6E-58 408.7 36.2 365 7-374 1-369 (369)
12 cd08277 liver_alcohol_DH_like 100.0 7.4E-54 1.6E-58 407.9 35.8 364 7-374 1-365 (365)
13 cd08239 THR_DH_like L-threonin 100.0 4.4E-53 9.4E-58 398.9 35.1 336 9-375 1-339 (339)
14 PLN02827 Alcohol dehydrogenase 100.0 4.5E-53 9.8E-58 403.5 35.5 363 7-375 11-376 (378)
15 PRK09880 L-idonate 5-dehydroge 100.0 3.4E-52 7.4E-57 393.2 34.8 336 7-375 3-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 2.9E-52 6.3E-57 392.3 33.9 344 9-375 1-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 1E-50 2.2E-55 388.2 33.8 344 8-375 2-390 (393)
18 PLN02586 probable cinnamyl alc 100.0 1.9E-50 4.1E-55 383.2 33.3 341 5-375 9-353 (360)
19 COG0604 Qor NADPH:quinone redu 100.0 1.1E-50 2.3E-55 376.9 29.6 315 9-375 1-326 (326)
20 TIGR03201 dearomat_had 6-hydro 100.0 1.9E-49 4.2E-54 375.3 33.6 335 12-375 2-349 (349)
21 PLN02178 cinnamyl-alcohol dehy 100.0 3E-49 6.5E-54 376.3 34.0 335 11-375 9-348 (375)
22 PRK10309 galactitol-1-phosphat 100.0 4.5E-49 9.9E-54 372.7 34.5 337 9-375 1-346 (347)
23 TIGR02822 adh_fam_2 zinc-bindi 100.0 7.8E-49 1.7E-53 367.8 31.8 321 12-374 2-329 (329)
24 cd08230 glucose_DH Glucose deh 100.0 1.3E-48 2.9E-53 370.6 33.0 333 9-375 1-355 (355)
25 cd08299 alcohol_DH_class_I_II_ 100.0 2.1E-47 4.5E-52 364.2 37.7 366 5-375 4-373 (373)
26 cd08231 MDR_TM0436_like Hypoth 100.0 1.2E-47 2.6E-52 364.9 35.7 349 10-375 2-361 (361)
27 PLN02514 cinnamyl-alcohol dehy 100.0 1E-47 2.2E-52 364.4 34.2 338 8-375 9-350 (357)
28 cd08233 butanediol_DH_like (2R 100.0 2.5E-47 5.4E-52 361.4 35.1 336 9-374 1-351 (351)
29 cd05279 Zn_ADH1 Liver alcohol 100.0 3.4E-47 7.3E-52 362.1 35.1 359 9-374 1-365 (365)
30 cd08278 benzyl_alcohol_DH Benz 100.0 3.9E-46 8.5E-51 354.8 35.7 360 7-374 1-365 (365)
31 cd08237 ribitol-5-phosphate_DH 100.0 8.1E-47 1.8E-51 356.1 28.0 321 8-375 2-339 (341)
32 KOG1197 Predicted quinone oxid 100.0 4.2E-47 9.1E-52 322.1 22.4 318 2-374 2-329 (336)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 2.7E-45 5.8E-50 347.5 35.2 342 9-375 1-351 (351)
34 cd08279 Zn_ADH_class_III Class 100.0 4.7E-45 1E-49 347.3 36.5 360 9-373 1-362 (363)
35 cd08238 sorbose_phosphate_red 100.0 4.2E-45 9E-50 352.5 32.2 331 7-375 1-368 (410)
36 PRK10083 putative oxidoreducta 100.0 1.7E-44 3.7E-49 340.3 34.3 333 9-375 1-337 (339)
37 cd08296 CAD_like Cinnamyl alco 100.0 1.7E-44 3.6E-49 339.6 33.3 330 9-374 1-333 (333)
38 cd08286 FDH_like_ADH2 formalde 100.0 9.6E-44 2.1E-48 336.1 34.9 338 9-375 1-345 (345)
39 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.3E-44 2.7E-49 336.4 28.4 302 8-374 1-308 (308)
40 cd08283 FDH_like_1 Glutathione 100.0 1.3E-43 2.9E-48 339.7 35.4 353 9-375 1-386 (386)
41 cd05284 arabinose_DH_like D-ar 100.0 1.8E-43 3.9E-48 333.5 33.7 333 9-375 1-340 (340)
42 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.1E-43 6.8E-48 333.2 34.3 335 9-373 1-350 (350)
43 cd08246 crotonyl_coA_red croto 100.0 1.6E-43 3.4E-48 340.3 32.4 343 5-374 9-392 (393)
44 cd05278 FDH_like Formaldehyde 100.0 4.4E-43 9.6E-48 331.7 33.6 340 9-375 1-347 (347)
45 cd08240 6_hydroxyhexanoate_dh_ 100.0 7.5E-43 1.6E-47 330.6 33.4 336 9-375 1-350 (350)
46 PRK05396 tdh L-threonine 3-deh 100.0 3.7E-42 8.1E-47 324.7 34.4 336 9-375 1-340 (341)
47 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.6E-42 7.8E-47 328.0 33.6 357 9-374 1-367 (367)
48 cd08291 ETR_like_1 2-enoyl thi 100.0 1.3E-42 2.7E-47 325.6 29.2 309 9-374 1-324 (324)
49 cd08284 FDH_like_2 Glutathione 100.0 7E-42 1.5E-46 323.2 34.5 339 9-374 1-343 (344)
50 cd08260 Zn_ADH6 Alcohol dehydr 100.0 5.6E-42 1.2E-46 324.0 33.8 338 9-374 1-344 (345)
51 TIGR01751 crot-CoA-red crotony 100.0 3.7E-42 8.1E-47 331.1 32.2 344 5-375 4-387 (398)
52 cd08287 FDH_like_ADH3 formalde 100.0 1.5E-41 3.2E-46 321.2 34.6 335 9-374 1-344 (345)
53 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.2E-41 4.8E-46 319.0 35.2 334 9-375 1-337 (337)
54 cd08242 MDR_like Medium chain 100.0 1.3E-41 2.9E-46 318.0 33.3 317 9-375 1-319 (319)
55 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.3E-41 2.8E-46 325.8 33.2 338 9-373 29-383 (384)
56 cd05283 CAD1 Cinnamyl alcohol 100.0 9E-42 2E-46 321.6 31.4 334 10-374 1-337 (337)
57 cd08235 iditol_2_DH_like L-idi 100.0 2.6E-41 5.7E-46 319.1 34.7 336 9-374 1-343 (343)
58 cd08282 PFDH_like Pseudomonas 100.0 2.9E-41 6.3E-46 322.5 34.8 341 9-375 1-375 (375)
59 cd05285 sorbitol_DH Sorbitol d 100.0 3.7E-41 8E-46 318.2 33.6 333 11-374 1-342 (343)
60 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.1E-41 8.9E-46 317.6 33.1 324 9-374 1-341 (341)
61 PLN02702 L-idonate 5-dehydroge 100.0 1.2E-40 2.7E-45 317.1 34.6 338 8-374 17-363 (364)
62 PRK09422 ethanol-active dehydr 100.0 9.8E-41 2.1E-45 314.6 33.4 331 9-374 1-335 (338)
63 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1E-40 2.2E-45 314.2 33.1 334 9-375 1-338 (338)
64 PRK13771 putative alcohol dehy 100.0 5.2E-41 1.1E-45 316.0 30.6 329 9-375 1-333 (334)
65 cd08297 CAD3 Cinnamyl alcohol 100.0 1.7E-40 3.7E-45 313.3 33.6 335 9-375 1-341 (341)
66 PLN03154 putative allyl alcoho 100.0 7.4E-41 1.6E-45 316.1 29.8 317 1-375 1-345 (348)
67 TIGR03366 HpnZ_proposed putati 100.0 1E-41 2.2E-46 312.9 23.0 270 64-356 1-280 (280)
68 cd08236 sugar_DH NAD(P)-depend 100.0 3.5E-40 7.6E-45 311.5 34.0 336 9-373 1-343 (343)
69 cd08292 ETR_like_2 2-enoyl thi 100.0 1.7E-40 3.6E-45 311.0 30.5 310 9-374 1-324 (324)
70 cd05281 TDH Threonine dehydrog 100.0 5.7E-40 1.2E-44 309.8 33.7 336 9-375 1-341 (341)
71 cd08259 Zn_ADH5 Alcohol dehydr 100.0 6.6E-40 1.4E-44 307.8 32.7 329 9-374 1-332 (332)
72 TIGR00692 tdh L-threonine 3-de 100.0 7.7E-40 1.7E-44 308.8 33.2 332 14-375 4-340 (340)
73 cd08232 idonate-5-DH L-idonate 100.0 1.7E-39 3.7E-44 306.3 33.0 331 13-375 2-339 (339)
74 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-39 2.8E-44 306.6 31.9 336 9-375 1-342 (342)
75 cd08234 threonine_DH_like L-th 100.0 2.3E-39 5E-44 304.7 33.4 331 9-373 1-333 (334)
76 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.7E-40 1.7E-44 306.8 29.4 320 9-371 1-324 (325)
77 KOG0025 Zn2+-binding dehydroge 100.0 1.3E-39 2.9E-44 281.4 25.4 308 4-365 15-340 (354)
78 cd08274 MDR9 Medium chain dehy 100.0 2.5E-39 5.5E-44 306.4 29.8 324 9-375 1-350 (350)
79 cd08298 CAD2 Cinnamyl alcohol 100.0 5.2E-39 1.1E-43 301.7 31.1 322 9-373 1-329 (329)
80 cd08295 double_bond_reductase_ 100.0 1.9E-39 4E-44 305.9 28.1 312 6-375 5-338 (338)
81 cd08245 CAD Cinnamyl alcohol d 100.0 4.8E-39 1E-43 302.1 30.6 327 10-373 1-330 (330)
82 cd08258 Zn_ADH4 Alcohol dehydr 100.0 9.9E-39 2.2E-43 296.8 30.8 301 9-339 1-306 (306)
83 cd08293 PTGR2 Prostaglandin re 100.0 1.2E-38 2.7E-43 301.1 31.7 299 20-375 22-345 (345)
84 cd08294 leukotriene_B4_DH_like 100.0 1.2E-38 2.6E-43 299.2 29.0 304 8-375 2-329 (329)
85 TIGR02825 B4_12hDH leukotriene 100.0 3E-38 6.5E-43 296.1 27.4 292 20-374 18-325 (325)
86 cd08290 ETR 2-enoyl thioester 100.0 6.4E-38 1.4E-42 295.8 27.9 315 9-375 1-341 (341)
87 cd08276 MDR7 Medium chain dehy 100.0 3.2E-37 7E-42 289.9 32.5 331 9-375 1-336 (336)
88 PRK10754 quinone oxidoreductas 100.0 7.3E-38 1.6E-42 293.7 26.9 316 8-375 1-327 (327)
89 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.3E-37 2.9E-42 293.0 28.0 308 10-374 1-334 (336)
90 cd08244 MDR_enoyl_red Possible 100.0 4.4E-37 9.6E-42 287.8 30.8 313 9-375 1-324 (324)
91 PTZ00354 alcohol dehydrogenase 100.0 3.3E-37 7.1E-42 289.8 29.7 312 8-374 1-327 (334)
92 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-36 2.7E-41 284.9 30.6 313 9-375 1-325 (325)
93 cd08250 Mgc45594_like Mgc45594 100.0 2.1E-36 4.5E-41 284.0 28.6 309 8-374 1-329 (329)
94 cd08249 enoyl_reductase_like e 100.0 4.6E-36 9.9E-41 282.9 29.3 311 9-375 1-339 (339)
95 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.2E-35 2.7E-40 276.5 31.0 300 20-374 6-312 (312)
96 KOG1198 Zinc-binding oxidoredu 100.0 1.2E-36 2.6E-41 282.9 23.9 299 21-375 20-345 (347)
97 cd08289 MDR_yhfp_like Yhfp put 100.0 9.2E-36 2E-40 279.2 29.7 314 9-375 1-326 (326)
98 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-35 2.7E-40 277.8 28.1 299 21-374 14-323 (323)
99 cd08243 quinone_oxidoreductase 100.0 1.7E-35 3.7E-40 276.2 28.8 310 9-373 1-319 (320)
100 TIGR02823 oxido_YhdH putative 100.0 4.9E-35 1.1E-39 274.0 31.1 310 10-375 1-323 (323)
101 COG2130 Putative NADP-dependen 100.0 1E-35 2.2E-40 259.9 24.3 296 20-375 26-338 (340)
102 cd08270 MDR4 Medium chain dehy 100.0 3.1E-35 6.6E-40 273.1 27.8 298 9-375 1-305 (305)
103 cd08252 AL_MDR Arginate lyase 100.0 6.3E-35 1.4E-39 274.7 29.5 312 9-374 1-336 (336)
104 cd05276 p53_inducible_oxidored 100.0 2.9E-34 6.4E-39 267.5 29.5 310 9-373 1-323 (323)
105 cd08288 MDR_yhdh Yhdh putative 100.0 8.5E-34 1.9E-38 265.7 31.0 312 9-375 1-324 (324)
106 cd05286 QOR2 Quinone oxidoredu 100.0 8.4E-34 1.8E-38 264.1 30.5 310 10-375 1-320 (320)
107 cd08253 zeta_crystallin Zeta-c 100.0 8.2E-34 1.8E-38 264.9 29.2 316 9-375 1-325 (325)
108 cd05188 MDR Medium chain reduc 100.0 7.3E-34 1.6E-38 258.7 26.4 268 35-335 1-270 (271)
109 cd08271 MDR5 Medium chain dehy 100.0 1.1E-33 2.5E-38 264.5 27.7 310 9-375 1-325 (325)
110 cd08247 AST1_like AST1 is a cy 100.0 2.1E-33 4.5E-38 266.2 29.7 315 10-375 2-352 (352)
111 cd08272 MDR6 Medium chain dehy 100.0 1.5E-33 3.2E-38 263.6 28.1 311 9-375 1-326 (326)
112 cd08248 RTN4I1 Human Reticulon 100.0 3.9E-34 8.5E-39 270.9 24.4 308 9-374 1-350 (350)
113 TIGR02824 quinone_pig3 putativ 100.0 8.4E-33 1.8E-37 258.2 29.0 312 9-375 1-325 (325)
114 cd05288 PGDH Prostaglandin deh 100.0 5.8E-33 1.3E-37 260.6 27.2 304 9-373 2-329 (329)
115 cd08268 MDR2 Medium chain dehy 100.0 3.5E-32 7.7E-37 254.3 30.0 316 9-374 1-327 (328)
116 cd08273 MDR8 Medium chain dehy 100.0 2.4E-32 5.1E-37 256.6 27.5 305 9-373 1-330 (331)
117 cd08251 polyketide_synthase po 100.0 3.4E-32 7.4E-37 251.7 27.8 291 28-373 2-303 (303)
118 cd08241 QOR1 Quinone oxidoredu 100.0 1.7E-31 3.8E-36 249.0 29.2 310 9-374 1-323 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 6.2E-32 1.3E-36 250.6 25.0 301 9-373 1-309 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 1.2E-30 2.5E-35 245.4 30.2 309 10-375 1-337 (337)
121 cd05195 enoyl_red enoyl reduct 100.0 1E-30 2.2E-35 239.9 24.4 281 34-373 1-293 (293)
122 cd08267 MDR1 Medium chain dehy 100.0 1.3E-30 2.9E-35 243.1 25.1 294 22-373 15-319 (319)
123 smart00829 PKS_ER Enoylreducta 100.0 4.1E-30 8.8E-35 235.7 22.7 276 38-373 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 2.9E-28 6.3E-33 223.3 23.6 252 54-373 14-277 (277)
125 KOG1202 Animal-type fatty acid 100.0 5.5E-29 1.2E-33 246.6 16.9 289 21-375 1429-1741(2376)
126 KOG1196 Predicted NAD-dependen 100.0 6.5E-27 1.4E-31 204.1 23.3 291 24-375 27-340 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 8.5E-24 1.8E-28 165.7 8.8 107 33-159 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.5E-18 5.4E-23 139.1 12.8 129 201-337 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 3.7E-13 8.1E-18 127.6 16.9 165 188-374 199-375 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 1.8E-12 3.9E-17 126.1 14.6 156 187-348 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.8E-12 4E-17 104.2 3.6 120 234-373 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 4.9E-07 1.1E-11 88.1 12.3 109 188-298 161-288 (511)
133 PRK11873 arsM arsenite S-adeno 98.6 4.2E-07 9E-12 83.0 10.1 163 185-363 72-246 (272)
134 TIGR01035 hemA glutamyl-tRNA r 98.4 1.8E-08 3.8E-13 97.3 -3.0 160 64-274 89-252 (417)
135 PRK05476 S-adenosyl-L-homocyst 98.3 8.3E-06 1.8E-10 78.1 12.9 102 179-297 199-302 (425)
136 TIGR00936 ahcY adenosylhomocys 98.2 2.1E-05 4.5E-10 75.0 12.9 93 188-297 192-285 (406)
137 PRK08306 dipicolinate synthase 98.2 2.5E-05 5.3E-10 72.0 12.8 111 190-317 151-261 (296)
138 PRK00517 prmA ribosomal protei 98.1 1.3E-05 2.9E-10 72.1 9.5 136 144-297 78-216 (250)
139 PRK00045 hemA glutamyl-tRNA re 98.1 1.7E-07 3.7E-12 90.8 -3.2 160 64-274 91-254 (423)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1E-05 2.2E-10 75.2 7.6 130 154-297 139-276 (311)
141 PLN02494 adenosylhomocysteinas 98.1 5E-05 1.1E-09 73.1 12.0 92 189-297 252-344 (477)
142 PRK12771 putative glutamate sy 97.9 1.6E-05 3.5E-10 80.2 5.3 80 187-274 133-234 (564)
143 TIGR00518 alaDH alanine dehydr 97.8 0.00018 4E-09 68.4 11.6 99 190-298 166-271 (370)
144 TIGR00406 prmA ribosomal prote 97.8 0.00014 3.1E-09 66.8 9.4 97 188-296 157-261 (288)
145 COG2518 Pcm Protein-L-isoaspar 97.7 0.00034 7.3E-09 60.1 9.5 110 171-293 55-168 (209)
146 PTZ00075 Adenosylhomocysteinas 97.7 0.00033 7.1E-09 67.8 10.3 93 188-297 251-344 (476)
147 PF11017 DUF2855: Protein of u 97.6 0.00077 1.7E-08 61.7 11.9 139 144-297 90-234 (314)
148 TIGR02853 spore_dpaA dipicolin 97.6 0.0013 2.9E-08 60.3 12.6 94 190-297 150-243 (287)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00042 9.1E-09 56.1 7.6 100 187-297 8-112 (135)
150 PRK08324 short chain dehydroge 97.5 0.00082 1.8E-08 69.4 11.5 114 144-271 386-507 (681)
151 PRK00377 cbiT cobalt-precorrin 97.4 0.0019 4.2E-08 55.9 11.4 102 184-293 34-144 (198)
152 COG3967 DltE Short-chain dehyd 97.4 0.0012 2.7E-08 56.0 8.6 79 190-271 4-87 (245)
153 COG2242 CobL Precorrin-6B meth 97.3 0.0024 5.1E-08 53.8 9.9 103 184-297 28-138 (187)
154 PRK11705 cyclopropane fatty ac 97.3 0.0014 3.1E-08 62.6 9.4 112 171-294 148-267 (383)
155 COG4221 Short-chain alcohol de 97.3 0.0015 3.4E-08 57.1 8.7 80 190-272 5-91 (246)
156 TIGR00438 rrmJ cell division p 97.3 0.0041 8.9E-08 53.3 11.4 101 185-294 27-146 (188)
157 PRK13943 protein-L-isoaspartat 97.2 0.0035 7.5E-08 58.3 11.1 102 183-293 73-179 (322)
158 PRK14967 putative methyltransf 97.2 0.018 4E-07 50.7 14.8 99 184-294 30-159 (223)
159 PF02826 2-Hacid_dh_C: D-isome 97.1 0.006 1.3E-07 51.8 10.1 92 187-295 32-128 (178)
160 PF02353 CMAS: Mycolic acid cy 97.0 0.0007 1.5E-08 61.6 4.3 99 182-295 54-167 (273)
161 PRK05786 fabG 3-ketoacyl-(acyl 97.0 0.0099 2.1E-07 52.7 11.7 104 190-297 4-138 (238)
162 COG2230 Cfa Cyclopropane fatty 97.0 0.002 4.3E-08 58.2 7.0 103 179-298 61-180 (283)
163 COG0300 DltE Short-chain dehyd 96.9 0.0061 1.3E-07 54.7 9.5 81 188-272 3-94 (265)
164 TIGR02469 CbiT precorrin-6Y C5 96.9 0.016 3.5E-07 45.5 10.9 102 183-294 12-122 (124)
165 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0043 9.4E-08 52.2 7.9 104 190-297 19-142 (168)
166 PF12847 Methyltransf_18: Meth 96.9 0.0066 1.4E-07 46.9 8.4 93 190-293 1-110 (112)
167 PF13460 NAD_binding_10: NADH( 96.9 0.013 2.9E-07 49.6 10.7 93 194-297 1-100 (183)
168 PRK05993 short chain dehydroge 96.9 0.0076 1.7E-07 55.0 9.7 78 190-271 3-85 (277)
169 PF00670 AdoHcyase_NAD: S-aden 96.9 0.015 3.3E-07 48.0 10.3 103 187-309 19-122 (162)
170 PRK13942 protein-L-isoaspartat 96.8 0.016 3.4E-07 50.8 11.1 101 182-293 68-175 (212)
171 PRK04148 hypothetical protein; 96.8 0.0077 1.7E-07 48.2 8.2 96 187-293 13-108 (134)
172 COG1748 LYS9 Saccharopine dehy 96.8 0.012 2.6E-07 55.8 10.7 96 192-296 2-101 (389)
173 COG4122 Predicted O-methyltran 96.8 0.013 2.7E-07 51.2 10.1 106 183-294 52-166 (219)
174 COG2264 PrmA Ribosomal protein 96.8 0.0097 2.1E-07 54.2 9.7 130 154-297 130-266 (300)
175 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.013 2.9E-07 49.1 10.0 98 168-297 21-119 (168)
176 PRK03369 murD UDP-N-acetylmura 96.8 0.0074 1.6E-07 59.8 9.9 74 187-273 8-81 (488)
177 PF06325 PrmA: Ribosomal prote 96.7 0.0076 1.6E-07 55.3 8.6 95 188-297 159-262 (295)
178 KOG1205 Predicted dehydrogenas 96.7 0.013 2.8E-07 53.1 9.8 107 189-298 10-153 (282)
179 PRK05693 short chain dehydroge 96.7 0.012 2.5E-07 53.6 9.7 78 192-272 2-82 (274)
180 PF01135 PCMT: Protein-L-isoas 96.6 0.0051 1.1E-07 53.6 6.3 102 182-293 64-171 (209)
181 PRK12742 oxidoreductase; Provi 96.6 0.034 7.4E-07 49.1 11.9 77 190-272 5-85 (237)
182 PLN03209 translocon at the inn 96.6 0.032 6.9E-07 55.6 12.4 47 184-231 73-120 (576)
183 PRK13940 glutamyl-tRNA reducta 96.6 0.012 2.6E-07 56.7 9.0 102 185-298 175-277 (414)
184 PRK08017 oxidoreductase; Provi 96.5 0.01 2.2E-07 53.2 8.0 77 192-272 3-84 (256)
185 PRK06182 short chain dehydroge 96.5 0.015 3.1E-07 52.9 9.1 80 190-272 2-84 (273)
186 PRK00107 gidB 16S rRNA methylt 96.5 0.013 2.8E-07 50.1 8.1 98 187-294 42-145 (187)
187 PRK13944 protein-L-isoaspartat 96.5 0.039 8.5E-07 48.0 11.3 101 182-293 64-172 (205)
188 PRK08177 short chain dehydroge 96.5 0.018 4E-07 50.6 9.1 77 192-272 2-81 (225)
189 PRK07060 short chain dehydroge 96.4 0.019 4.1E-07 51.0 9.2 77 190-272 8-87 (245)
190 COG2226 UbiE Methylase involve 96.4 0.036 7.9E-07 49.0 10.4 104 183-297 44-159 (238)
191 PRK07402 precorrin-6B methylas 96.4 0.061 1.3E-06 46.4 11.8 105 182-296 32-144 (196)
192 PRK07326 short chain dehydroge 96.4 0.047 1E-06 48.2 11.5 80 190-272 5-92 (237)
193 PRK11207 tellurite resistance 96.4 0.013 2.8E-07 50.7 7.4 99 184-294 24-134 (197)
194 TIGR00080 pimt protein-L-isoas 96.4 0.011 2.3E-07 52.0 6.9 101 182-293 69-176 (215)
195 COG2519 GCD14 tRNA(1-methylade 96.4 0.027 5.8E-07 49.8 9.2 106 183-297 87-198 (256)
196 PRK06139 short chain dehydroge 96.4 0.015 3.1E-07 54.7 8.2 80 190-272 6-94 (330)
197 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.01 2.2E-07 58.3 7.3 94 184-297 27-126 (450)
198 KOG1209 1-Acyl dihydroxyaceton 96.4 0.013 2.9E-07 50.1 6.9 81 190-272 6-91 (289)
199 PRK07502 cyclohexadienyl dehyd 96.3 0.042 9.1E-07 51.0 10.8 91 192-295 7-101 (307)
200 PRK12549 shikimate 5-dehydroge 96.3 0.036 7.7E-07 50.8 10.0 43 189-231 125-167 (284)
201 TIGR01470 cysG_Nterm siroheme 96.3 0.061 1.3E-06 46.8 11.0 115 190-318 8-124 (205)
202 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.051 1.1E-06 53.3 11.7 80 189-271 208-293 (450)
203 PRK06949 short chain dehydroge 96.2 0.025 5.3E-07 50.8 8.8 81 189-272 7-96 (258)
204 TIGR01318 gltD_gamma_fam gluta 96.2 0.022 4.7E-07 56.2 8.9 79 189-274 139-238 (467)
205 PRK08217 fabG 3-ketoacyl-(acyl 96.2 0.029 6.3E-07 50.0 9.0 79 190-271 4-91 (253)
206 PRK08618 ornithine cyclodeamin 96.2 0.061 1.3E-06 50.4 11.3 105 186-305 122-232 (325)
207 PRK06057 short chain dehydroge 96.2 0.026 5.7E-07 50.6 8.6 80 190-272 6-89 (255)
208 PRK07806 short chain dehydroge 96.2 0.074 1.6E-06 47.4 11.5 102 190-295 5-135 (248)
209 COG2910 Putative NADH-flavin r 96.2 0.029 6.3E-07 47.0 7.8 93 193-297 2-107 (211)
210 PF03446 NAD_binding_2: NAD bi 96.1 0.13 2.9E-06 42.8 12.1 90 192-297 2-97 (163)
211 PRK12829 short chain dehydroge 96.1 0.021 4.4E-07 51.5 7.6 85 186-273 6-97 (264)
212 PRK05872 short chain dehydroge 96.1 0.018 3.8E-07 53.2 7.3 80 190-272 8-95 (296)
213 COG0373 HemA Glutamyl-tRNA red 96.1 0.034 7.3E-07 53.1 9.1 103 184-298 171-278 (414)
214 PRK12939 short chain dehydroge 96.1 0.071 1.5E-06 47.4 11.0 81 189-272 5-94 (250)
215 COG0686 Ald Alanine dehydrogen 96.1 0.025 5.5E-07 51.2 7.8 99 190-298 167-272 (371)
216 PRK12809 putative oxidoreducta 96.1 0.029 6.2E-07 57.7 9.3 77 190-273 309-406 (639)
217 PRK07231 fabG 3-ketoacyl-(acyl 96.1 0.031 6.6E-07 49.9 8.4 80 190-272 4-91 (251)
218 cd05311 NAD_bind_2_malic_enz N 96.0 0.1 2.2E-06 46.1 11.3 93 189-296 23-130 (226)
219 cd01078 NAD_bind_H4MPT_DH NADP 96.0 0.06 1.3E-06 46.3 9.8 76 189-273 26-108 (194)
220 PRK06718 precorrin-2 dehydroge 96.0 0.076 1.6E-06 46.1 10.3 113 190-318 9-124 (202)
221 PLN02366 spermidine synthase 96.0 0.079 1.7E-06 49.1 11.0 104 188-294 89-206 (308)
222 TIGR02356 adenyl_thiF thiazole 96.0 0.042 9.1E-07 47.7 8.7 35 190-224 20-54 (202)
223 PRK07831 short chain dehydroge 96.0 0.042 9.1E-07 49.5 9.0 83 187-272 13-107 (262)
224 PRK06953 short chain dehydroge 96.0 0.055 1.2E-06 47.5 9.5 77 192-272 2-80 (222)
225 PRK08339 short chain dehydroge 96.0 0.047 1E-06 49.4 9.2 80 190-272 7-95 (263)
226 COG0169 AroE Shikimate 5-dehyd 96.0 0.018 4E-07 52.4 6.4 45 189-233 124-168 (283)
227 COG3288 PntA NAD/NADP transhyd 96.0 0.025 5.4E-07 51.1 7.0 133 185-319 158-308 (356)
228 PRK01683 trans-aconitate 2-met 96.0 0.082 1.8E-06 47.7 10.7 99 183-293 24-129 (258)
229 cd01065 NAD_bind_Shikimate_DH 96.0 0.044 9.6E-07 45.1 8.3 95 189-295 17-117 (155)
230 PRK14175 bifunctional 5,10-met 96.0 0.065 1.4E-06 48.8 9.8 95 170-297 137-233 (286)
231 PRK06719 precorrin-2 dehydroge 95.9 0.069 1.5E-06 44.3 9.3 88 189-292 11-98 (157)
232 PRK06200 2,3-dihydroxy-2,3-dih 95.9 0.041 8.9E-07 49.6 8.7 79 190-271 5-89 (263)
233 PRK09072 short chain dehydroge 95.9 0.05 1.1E-06 49.0 9.3 80 190-272 4-90 (263)
234 TIGR01809 Shik-DH-AROM shikima 95.9 0.029 6.3E-07 51.4 7.7 43 190-232 124-166 (282)
235 PF08704 GCD14: tRNA methyltra 95.9 0.02 4.2E-07 51.1 6.3 108 182-296 32-148 (247)
236 TIGR03325 BphB_TodD cis-2,3-di 95.9 0.043 9.4E-07 49.5 8.7 79 190-271 4-88 (262)
237 PLN02780 ketoreductase/ oxidor 95.9 0.038 8.2E-07 51.7 8.4 80 190-271 52-141 (320)
238 cd01075 NAD_bind_Leu_Phe_Val_D 95.9 0.077 1.7E-06 45.9 9.8 110 188-317 25-137 (200)
239 PRK07814 short chain dehydroge 95.9 0.041 8.8E-07 49.7 8.4 80 190-272 9-97 (263)
240 PRK07340 ornithine cyclodeamin 95.9 0.049 1.1E-06 50.5 8.9 107 187-309 121-232 (304)
241 cd00755 YgdL_like Family of ac 95.9 0.19 4.1E-06 44.5 12.2 35 190-224 10-44 (231)
242 PRK06841 short chain dehydroge 95.9 0.046 1E-06 48.9 8.7 80 190-272 14-99 (255)
243 PRK07904 short chain dehydroge 95.9 0.063 1.4E-06 48.2 9.5 82 188-272 5-97 (253)
244 PRK12769 putative oxidoreducta 95.8 0.039 8.5E-07 56.9 8.9 78 189-273 325-423 (654)
245 PRK12828 short chain dehydroge 95.8 0.051 1.1E-06 47.9 8.6 80 190-272 6-92 (239)
246 PRK06180 short chain dehydroge 95.8 0.051 1.1E-06 49.5 8.7 80 190-272 3-88 (277)
247 PLN02781 Probable caffeoyl-CoA 95.8 0.084 1.8E-06 47.0 9.8 105 184-293 62-177 (234)
248 PRK04457 spermidine synthase; 95.8 0.13 2.9E-06 46.5 11.2 95 189-293 65-176 (262)
249 PRK07825 short chain dehydroge 95.8 0.053 1.1E-06 49.2 8.7 79 191-272 5-88 (273)
250 PRK09291 short chain dehydroge 95.8 0.049 1.1E-06 48.8 8.4 73 191-271 2-82 (257)
251 PRK07574 formate dehydrogenase 95.7 0.11 2.5E-06 49.5 10.9 89 190-294 191-284 (385)
252 PRK00258 aroE shikimate 5-dehy 95.7 0.034 7.4E-07 50.8 7.2 94 189-293 121-220 (278)
253 KOG4022 Dihydropteridine reduc 95.7 0.11 2.5E-06 42.5 9.2 98 192-296 4-131 (236)
254 PF13241 NAD_binding_7: Putati 95.7 0.024 5.2E-07 43.4 5.1 88 190-296 6-93 (103)
255 PF01596 Methyltransf_3: O-met 95.7 0.029 6.3E-07 48.7 6.1 101 185-294 40-155 (205)
256 PRK08317 hypothetical protein; 95.7 0.1 2.3E-06 46.0 10.0 102 182-294 11-124 (241)
257 PRK05866 short chain dehydroge 95.6 0.057 1.2E-06 49.8 8.5 80 190-272 39-127 (293)
258 PRK06196 oxidoreductase; Provi 95.6 0.068 1.5E-06 49.7 9.1 79 190-271 25-108 (315)
259 PRK06484 short chain dehydroge 95.6 0.14 2.9E-06 51.3 11.8 81 189-272 267-353 (520)
260 PRK00312 pcm protein-L-isoaspa 95.6 0.22 4.7E-06 43.4 11.8 98 183-293 71-174 (212)
261 PF02670 DXP_reductoisom: 1-de 95.6 0.077 1.7E-06 42.2 7.9 88 194-286 1-114 (129)
262 PRK07024 short chain dehydroge 95.6 0.07 1.5E-06 47.9 8.8 78 191-271 2-87 (257)
263 PLN02735 carbamoyl-phosphate s 95.6 0.16 3.4E-06 55.4 12.6 101 172-280 4-116 (1102)
264 COG1179 Dinucleotide-utilizing 95.6 0.17 3.7E-06 44.4 10.4 104 190-298 29-157 (263)
265 PRK06198 short chain dehydroge 95.6 0.06 1.3E-06 48.3 8.2 82 189-272 4-94 (260)
266 PRK06500 short chain dehydroge 95.6 0.069 1.5E-06 47.5 8.5 80 190-272 5-90 (249)
267 PRK05653 fabG 3-ketoacyl-(acyl 95.5 0.091 2E-06 46.5 9.2 80 190-272 4-92 (246)
268 TIGR01832 kduD 2-deoxy-D-gluco 95.5 0.098 2.1E-06 46.6 9.4 80 190-272 4-90 (248)
269 PF03435 Saccharop_dh: Sacchar 95.5 0.08 1.7E-06 50.8 9.4 90 194-292 1-96 (386)
270 PRK06179 short chain dehydroge 95.5 0.05 1.1E-06 49.2 7.6 77 191-272 4-83 (270)
271 CHL00194 ycf39 Ycf39; Provisio 95.5 0.088 1.9E-06 49.0 9.3 70 193-271 2-73 (317)
272 PRK07832 short chain dehydroge 95.5 0.22 4.7E-06 45.2 11.7 77 193-272 2-88 (272)
273 PRK08264 short chain dehydroge 95.5 0.092 2E-06 46.4 9.0 75 190-272 5-83 (238)
274 PRK07109 short chain dehydroge 95.5 0.074 1.6E-06 50.0 8.7 80 190-272 7-95 (334)
275 PRK05867 short chain dehydroge 95.5 0.083 1.8E-06 47.3 8.7 80 190-272 8-96 (253)
276 PRK07478 short chain dehydroge 95.4 0.076 1.7E-06 47.5 8.4 80 190-272 5-93 (254)
277 PRK05447 1-deoxy-D-xylulose 5- 95.4 0.14 3.1E-06 48.5 10.3 95 192-292 2-120 (385)
278 PRK07677 short chain dehydroge 95.4 0.074 1.6E-06 47.6 8.3 79 191-272 1-88 (252)
279 PRK13394 3-hydroxybutyrate deh 95.4 0.11 2.4E-06 46.6 9.4 80 190-272 6-94 (262)
280 PRK06128 oxidoreductase; Provi 95.4 0.21 4.5E-06 46.1 11.4 81 189-272 53-144 (300)
281 PRK07576 short chain dehydroge 95.4 0.13 2.9E-06 46.4 9.8 79 190-271 8-95 (264)
282 TIGR00477 tehB tellurite resis 95.4 0.058 1.3E-06 46.5 7.1 100 182-294 22-133 (195)
283 PLN02476 O-methyltransferase 95.4 0.13 2.8E-06 46.8 9.5 105 184-293 112-227 (278)
284 PRK00811 spermidine synthase; 95.4 0.099 2.2E-06 47.9 8.9 96 189-294 75-191 (283)
285 PRK00536 speE spermidine synth 95.4 0.069 1.5E-06 48.1 7.6 99 189-295 71-172 (262)
286 PLN03139 formate dehydrogenase 95.3 0.14 3.1E-06 48.9 10.1 90 189-294 197-291 (386)
287 PRK08267 short chain dehydroge 95.3 0.096 2.1E-06 47.1 8.8 78 192-272 2-87 (260)
288 PRK08265 short chain dehydroge 95.3 0.086 1.9E-06 47.5 8.5 80 190-272 5-90 (261)
289 PRK07577 short chain dehydroge 95.3 0.081 1.8E-06 46.6 8.1 75 190-272 2-78 (234)
290 PRK07523 gluconate 5-dehydroge 95.3 0.086 1.9E-06 47.2 8.4 80 190-272 9-97 (255)
291 PRK06505 enoyl-(acyl carrier p 95.3 0.095 2.1E-06 47.7 8.7 79 190-271 6-94 (271)
292 PRK06483 dihydromonapterin red 95.3 0.13 2.9E-06 45.4 9.5 79 191-272 2-84 (236)
293 PRK15116 sulfur acceptor prote 95.3 0.16 3.4E-06 46.0 9.8 35 190-224 29-63 (268)
294 PRK06849 hypothetical protein; 95.3 0.72 1.6E-05 44.3 15.1 95 190-286 3-100 (389)
295 PRK08213 gluconate 5-dehydroge 95.3 0.15 3.3E-06 45.8 9.9 80 190-272 11-99 (259)
296 PRK06181 short chain dehydroge 95.3 0.094 2E-06 47.2 8.5 79 191-272 1-88 (263)
297 PRK06125 short chain dehydroge 95.3 0.14 2.9E-06 46.1 9.5 77 190-272 6-91 (259)
298 PRK12475 thiamine/molybdopteri 95.3 0.098 2.1E-06 49.2 8.7 36 190-225 23-58 (338)
299 PRK07533 enoyl-(acyl carrier p 95.3 0.11 2.3E-06 46.8 8.8 79 190-271 9-97 (258)
300 PRK14103 trans-aconitate 2-met 95.3 0.23 5E-06 44.7 10.9 98 182-293 21-125 (255)
301 PLN02244 tocopherol O-methyltr 95.2 0.059 1.3E-06 50.8 7.3 95 189-295 117-224 (340)
302 PRK05717 oxidoreductase; Valid 95.2 0.11 2.4E-06 46.5 8.8 81 189-272 8-94 (255)
303 PRK08703 short chain dehydroge 95.2 0.082 1.8E-06 46.8 7.9 40 190-230 5-45 (239)
304 PRK07062 short chain dehydroge 95.2 0.1 2.2E-06 47.1 8.6 80 190-272 7-97 (265)
305 PRK08862 short chain dehydroge 95.2 0.12 2.7E-06 45.5 8.9 79 190-271 4-92 (227)
306 PRK06101 short chain dehydroge 95.2 0.12 2.5E-06 46.0 8.7 75 192-271 2-80 (240)
307 PRK07774 short chain dehydroge 95.2 0.11 2.5E-06 46.2 8.7 80 190-272 5-93 (250)
308 PRK12548 shikimate 5-dehydroge 95.2 0.15 3.2E-06 46.9 9.5 37 189-225 124-160 (289)
309 TIGR00507 aroE shikimate 5-deh 95.2 0.13 2.9E-06 46.7 9.1 92 188-294 114-214 (270)
310 PRK06194 hypothetical protein; 95.2 0.077 1.7E-06 48.5 7.7 80 190-272 5-93 (287)
311 TIGR02355 moeB molybdopterin s 95.2 0.095 2.1E-06 46.8 7.9 35 190-224 23-57 (240)
312 PRK06398 aldose dehydrogenase; 95.1 0.03 6.5E-07 50.5 4.8 75 190-272 5-82 (258)
313 PRK10258 biotin biosynthesis p 95.1 0.76 1.6E-05 41.2 13.9 99 184-295 36-141 (251)
314 PF00899 ThiF: ThiF family; I 95.1 0.1 2.2E-06 42.1 7.4 34 191-224 2-35 (135)
315 PRK15469 ghrA bifunctional gly 95.1 0.2 4.3E-06 46.6 10.2 90 189-296 134-228 (312)
316 TIGR00138 gidB 16S rRNA methyl 95.1 0.14 3.1E-06 43.5 8.6 92 190-293 42-141 (181)
317 TIGR03215 ac_ald_DH_ac acetald 95.1 0.18 3.9E-06 46.1 9.6 82 193-286 3-88 (285)
318 PRK09186 flagellin modificatio 95.1 0.15 3.3E-06 45.5 9.2 79 190-271 3-92 (256)
319 PRK08628 short chain dehydroge 95.1 0.086 1.9E-06 47.3 7.6 80 190-272 6-93 (258)
320 PRK04266 fibrillarin; Provisio 95.1 0.35 7.5E-06 42.7 11.1 102 184-293 66-175 (226)
321 PRK08219 short chain dehydroge 95.1 0.27 5.9E-06 42.9 10.6 74 192-272 4-81 (227)
322 PRK06141 ornithine cyclodeamin 95.1 0.23 5E-06 46.3 10.5 106 186-306 120-231 (314)
323 cd01483 E1_enzyme_family Super 95.0 0.16 3.4E-06 41.3 8.4 32 193-224 1-32 (143)
324 PRK13243 glyoxylate reductase; 95.0 0.22 4.8E-06 46.8 10.3 87 190-294 149-240 (333)
325 PF02254 TrkA_N: TrkA-N domain 95.0 0.62 1.4E-05 36.0 11.5 92 194-293 1-95 (116)
326 cd00757 ThiF_MoeB_HesA_family 95.0 0.19 4.1E-06 44.5 9.4 35 190-224 20-54 (228)
327 PF03807 F420_oxidored: NADP o 95.0 0.27 5.9E-06 36.7 9.1 85 193-293 1-93 (96)
328 PRK07454 short chain dehydroge 95.0 0.17 3.7E-06 44.8 9.3 80 190-272 5-93 (241)
329 PRK01438 murD UDP-N-acetylmura 95.0 0.17 3.6E-06 50.2 10.0 71 189-273 14-89 (480)
330 TIGR02354 thiF_fam2 thiamine b 95.0 0.1 2.2E-06 45.2 7.4 35 190-224 20-54 (200)
331 PRK06172 short chain dehydroge 95.0 0.13 2.9E-06 45.9 8.6 80 190-272 6-94 (253)
332 PRK08643 acetoin reductase; Va 95.0 0.15 3.3E-06 45.6 9.0 79 191-272 2-89 (256)
333 PRK14192 bifunctional 5,10-met 95.0 0.21 4.7E-06 45.6 9.8 78 188-297 156-234 (283)
334 PRK05690 molybdopterin biosynt 95.0 0.14 3E-06 45.9 8.4 35 190-224 31-65 (245)
335 PRK05876 short chain dehydroge 95.0 0.15 3.1E-06 46.5 8.8 80 190-272 5-93 (275)
336 PRK08340 glucose-1-dehydrogena 95.0 0.16 3.4E-06 45.7 9.0 77 193-272 2-86 (259)
337 PRK01581 speE spermidine synth 94.9 0.37 8E-06 45.4 11.3 103 188-294 148-268 (374)
338 TIGR03840 TMPT_Se_Te thiopurin 94.9 0.31 6.8E-06 42.6 10.4 102 188-295 32-153 (213)
339 COG1052 LdhA Lactate dehydroge 94.9 0.5 1.1E-05 44.1 12.2 91 189-297 144-239 (324)
340 PRK10538 malonic semialdehyde 94.9 0.13 2.8E-06 45.9 8.3 77 193-272 2-84 (248)
341 PRK06138 short chain dehydroge 94.9 0.13 2.9E-06 45.7 8.4 80 190-272 4-91 (252)
342 PRK12823 benD 1,6-dihydroxycyc 94.9 0.12 2.6E-06 46.3 8.1 79 190-271 7-93 (260)
343 PTZ00098 phosphoethanolamine N 94.9 0.21 4.5E-06 45.3 9.5 104 182-296 44-158 (263)
344 PRK06079 enoyl-(acyl carrier p 94.9 0.14 3E-06 45.9 8.4 79 190-271 6-92 (252)
345 PRK07890 short chain dehydroge 94.9 0.13 2.9E-06 46.0 8.3 80 190-272 4-92 (258)
346 KOG1014 17 beta-hydroxysteroid 94.9 0.17 3.8E-06 46.0 8.7 80 189-272 47-136 (312)
347 PLN00203 glutamyl-tRNA reducta 94.9 0.16 3.4E-06 50.6 9.3 98 190-298 265-373 (519)
348 PLN02589 caffeoyl-CoA O-methyl 94.9 0.25 5.5E-06 44.2 9.8 103 184-292 73-188 (247)
349 PRK06603 enoyl-(acyl carrier p 94.9 0.15 3.3E-06 46.0 8.5 79 190-271 7-95 (260)
350 PRK08287 cobalt-precorrin-6Y C 94.9 0.62 1.3E-05 39.7 12.0 98 183-293 24-130 (187)
351 PRK07035 short chain dehydroge 94.9 0.12 2.6E-06 46.2 7.9 79 190-271 7-94 (252)
352 COG0569 TrkA K+ transport syst 94.8 0.23 4.9E-06 43.9 9.4 73 193-273 2-77 (225)
353 PRK05875 short chain dehydroge 94.8 0.16 3.6E-06 46.0 8.9 39 190-229 6-45 (276)
354 PRK07688 thiamine/molybdopteri 94.8 0.16 3.5E-06 47.8 8.9 35 190-224 23-57 (339)
355 PRK07453 protochlorophyllide o 94.8 0.14 3E-06 47.8 8.6 79 190-271 5-92 (322)
356 PRK12367 short chain dehydroge 94.8 0.18 4E-06 45.1 9.0 73 190-272 13-89 (245)
357 PF00106 adh_short: short chai 94.8 0.12 2.7E-06 42.8 7.3 80 192-273 1-91 (167)
358 PRK00121 trmB tRNA (guanine-N( 94.8 0.17 3.7E-06 43.8 8.4 97 190-294 40-156 (202)
359 PRK12481 2-deoxy-D-gluconate 3 94.8 0.22 4.7E-06 44.6 9.4 80 190-272 7-93 (251)
360 PRK06124 gluconate 5-dehydroge 94.8 0.18 4E-06 45.1 8.9 80 190-272 10-98 (256)
361 PF02558 ApbA: Ketopantoate re 94.8 0.021 4.5E-07 46.9 2.5 97 194-296 1-103 (151)
362 PLN03075 nicotianamine synthas 94.8 0.17 3.7E-06 46.3 8.5 98 189-293 122-232 (296)
363 PRK07063 short chain dehydroge 94.8 0.17 3.6E-06 45.5 8.6 80 190-272 6-96 (260)
364 TIGR03206 benzo_BadH 2-hydroxy 94.8 0.18 4E-06 44.8 8.8 79 190-271 2-89 (250)
365 PRK08589 short chain dehydroge 94.8 0.15 3.3E-06 46.3 8.3 79 190-272 5-92 (272)
366 PRK09242 tropinone reductase; 94.7 0.17 3.7E-06 45.3 8.6 80 190-272 8-98 (257)
367 PRK11036 putative S-adenosyl-L 94.7 0.19 4E-06 45.3 8.7 94 189-294 43-149 (255)
368 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.2 4.3E-06 44.0 8.4 96 189-294 58-161 (243)
369 PRK12937 short chain dehydroge 94.7 0.45 9.9E-06 42.1 11.2 80 190-272 4-93 (245)
370 PRK05884 short chain dehydroge 94.7 0.2 4.3E-06 44.1 8.7 74 193-271 2-78 (223)
371 PRK08762 molybdopterin biosynt 94.7 0.21 4.6E-06 47.8 9.5 35 190-224 134-168 (376)
372 PRK05854 short chain dehydroge 94.7 0.21 4.6E-06 46.4 9.3 40 190-230 13-53 (313)
373 KOG0725 Reductases with broad 94.7 0.15 3.3E-06 46.3 8.1 81 189-272 6-99 (270)
374 PRK07856 short chain dehydroge 94.7 0.16 3.6E-06 45.3 8.3 78 190-272 5-85 (252)
375 PRK08300 acetaldehyde dehydrog 94.7 0.23 4.9E-06 45.7 9.1 92 192-293 5-100 (302)
376 TIGR01505 tartro_sem_red 2-hyd 94.7 0.31 6.7E-06 44.8 10.2 70 193-277 1-70 (291)
377 PRK06114 short chain dehydroge 94.7 0.2 4.4E-06 44.8 8.9 80 190-272 7-96 (254)
378 KOG1252 Cystathionine beta-syn 94.7 0.44 9.5E-06 43.9 10.7 56 184-240 96-155 (362)
379 PRK06701 short chain dehydroge 94.7 0.36 7.7E-06 44.4 10.6 83 187-272 42-134 (290)
380 TIGR00537 hemK_rel_arch HemK-r 94.7 0.65 1.4E-05 39.3 11.5 45 186-233 15-59 (179)
381 PRK08993 2-deoxy-D-gluconate 3 94.6 0.3 6.5E-06 43.7 9.9 80 190-272 9-95 (253)
382 PRK07066 3-hydroxybutyryl-CoA 94.6 0.35 7.6E-06 45.1 10.4 39 192-231 8-46 (321)
383 PRK06197 short chain dehydroge 94.6 0.21 4.5E-06 46.2 9.0 80 189-271 14-104 (306)
384 COG0031 CysK Cysteine synthase 94.6 0.67 1.5E-05 42.4 11.8 59 184-243 55-116 (300)
385 PRK08277 D-mannonate oxidoredu 94.6 0.22 4.7E-06 45.3 8.9 79 190-271 9-96 (278)
386 PRK07074 short chain dehydroge 94.5 0.24 5.1E-06 44.4 9.0 79 191-272 2-87 (257)
387 PRK07417 arogenate dehydrogena 94.5 0.25 5.4E-06 45.1 9.3 87 193-294 2-91 (279)
388 PRK06914 short chain dehydroge 94.5 0.22 4.7E-06 45.3 8.8 78 191-272 3-91 (280)
389 PRK06482 short chain dehydroge 94.5 0.25 5.5E-06 44.8 9.3 78 192-272 3-86 (276)
390 PRK08415 enoyl-(acyl carrier p 94.5 0.22 4.8E-06 45.3 8.8 104 190-297 4-146 (274)
391 PRK06720 hypothetical protein; 94.5 0.28 6E-06 41.2 8.7 80 190-272 15-103 (169)
392 PF05368 NmrA: NmrA-like famil 94.5 0.2 4.3E-06 44.3 8.3 69 194-271 1-73 (233)
393 PRK05562 precorrin-2 dehydroge 94.5 0.68 1.5E-05 40.6 11.3 116 189-318 23-140 (223)
394 PRK12747 short chain dehydroge 94.5 0.52 1.1E-05 42.0 11.1 38 190-228 3-42 (252)
395 PRK08085 gluconate 5-dehydroge 94.5 0.26 5.7E-06 44.0 9.2 80 190-272 8-96 (254)
396 PRK08328 hypothetical protein; 94.5 0.24 5.3E-06 43.9 8.7 35 190-224 26-60 (231)
397 PRK12826 3-ketoacyl-(acyl-carr 94.5 0.15 3.2E-06 45.3 7.5 80 190-272 5-93 (251)
398 PRK06463 fabG 3-ketoacyl-(acyl 94.5 0.24 5.3E-06 44.3 8.9 80 190-272 6-89 (255)
399 PLN02928 oxidoreductase family 94.4 0.32 6.9E-06 46.0 9.9 96 189-295 157-263 (347)
400 PRK10669 putative cation:proto 94.4 0.38 8.3E-06 48.6 11.2 75 192-273 418-492 (558)
401 cd01492 Aos1_SUMO Ubiquitin ac 94.4 0.2 4.3E-06 43.2 7.9 35 190-224 20-54 (197)
402 PRK12384 sorbitol-6-phosphate 94.4 0.22 4.7E-06 44.7 8.6 79 191-272 2-91 (259)
403 PRK07666 fabG 3-ketoacyl-(acyl 94.4 0.24 5.3E-06 43.7 8.7 80 190-272 6-94 (239)
404 PF01408 GFO_IDH_MocA: Oxidore 94.4 0.86 1.9E-05 35.4 10.9 90 193-297 2-95 (120)
405 PRK08226 short chain dehydroge 94.4 0.22 4.7E-06 44.8 8.4 80 190-272 5-92 (263)
406 TIGR00417 speE spermidine synt 94.4 0.55 1.2E-05 42.7 11.0 102 189-294 71-186 (270)
407 PRK07067 sorbitol dehydrogenas 94.4 0.27 5.8E-06 44.1 8.9 79 190-271 5-89 (257)
408 PRK11559 garR tartronate semia 94.4 0.52 1.1E-05 43.4 11.0 70 193-277 4-73 (296)
409 PLN02253 xanthoxin dehydrogena 94.3 0.22 4.7E-06 45.3 8.4 80 190-272 17-104 (280)
410 PRK08263 short chain dehydroge 94.3 0.22 4.7E-06 45.2 8.4 79 191-272 3-87 (275)
411 TIGR02752 MenG_heptapren 2-hep 94.3 0.19 4.2E-06 44.4 7.8 101 184-295 39-152 (231)
412 PLN02233 ubiquinone biosynthes 94.3 0.43 9.3E-06 43.2 10.2 103 184-297 67-185 (261)
413 PRK08251 short chain dehydroge 94.3 0.24 5.3E-06 44.0 8.5 78 191-271 2-90 (248)
414 KOG1201 Hydroxysteroid 17-beta 94.3 0.19 4.1E-06 45.6 7.5 79 188-272 35-124 (300)
415 PRK12550 shikimate 5-dehydroge 94.3 0.15 3.3E-06 46.3 7.2 46 187-232 118-163 (272)
416 TIGR00563 rsmB ribosomal RNA s 94.3 0.39 8.4E-06 46.8 10.5 105 184-297 232-371 (426)
417 PLN02657 3,8-divinyl protochlo 94.3 0.27 5.8E-06 47.3 9.2 82 186-272 55-146 (390)
418 PRK08644 thiamine biosynthesis 94.3 0.24 5.2E-06 43.3 8.1 35 190-224 27-61 (212)
419 PRK08945 putative oxoacyl-(acy 94.3 0.33 7.1E-06 43.2 9.3 42 187-229 8-50 (247)
420 PLN00141 Tic62-NAD(P)-related 94.3 0.23 5.1E-06 44.4 8.3 80 186-272 12-95 (251)
421 COG2084 MmsB 3-hydroxyisobutyr 94.2 0.56 1.2E-05 42.8 10.5 87 193-295 2-96 (286)
422 PRK11188 rrmJ 23S rRNA methylt 94.2 0.74 1.6E-05 40.1 11.1 98 188-293 49-164 (209)
423 PRK12429 3-hydroxybutyrate deh 94.2 0.25 5.4E-06 44.1 8.4 80 190-272 3-91 (258)
424 PRK08159 enoyl-(acyl carrier p 94.2 0.32 6.9E-06 44.2 9.2 81 188-271 7-97 (272)
425 PRK08690 enoyl-(acyl carrier p 94.2 0.27 5.9E-06 44.3 8.6 80 190-272 5-94 (261)
426 PRK06484 short chain dehydroge 94.2 0.24 5.2E-06 49.5 9.0 80 190-272 4-89 (520)
427 PRK06035 3-hydroxyacyl-CoA deh 94.2 0.59 1.3E-05 43.0 10.9 39 192-231 4-42 (291)
428 PRK06940 short chain dehydroge 94.1 0.3 6.5E-06 44.4 8.9 78 191-272 2-86 (275)
429 PRK05708 2-dehydropantoate 2-r 94.1 0.27 5.8E-06 45.6 8.6 96 192-294 3-104 (305)
430 PRK07102 short chain dehydroge 94.1 0.33 7.1E-06 43.1 9.0 38 192-230 2-40 (243)
431 PRK07424 bifunctional sterol d 94.1 0.25 5.5E-06 47.6 8.6 74 190-272 177-255 (406)
432 PRK14618 NAD(P)H-dependent gly 94.1 0.57 1.2E-05 43.9 10.8 95 192-295 5-105 (328)
433 PRK07791 short chain dehydroge 94.1 0.52 1.1E-05 43.1 10.4 36 189-225 4-40 (286)
434 TIGR02622 CDP_4_6_dhtase CDP-g 94.1 0.21 4.4E-06 47.2 7.9 76 190-272 3-85 (349)
435 PRK14982 acyl-ACP reductase; P 94.0 0.29 6.3E-06 45.8 8.6 95 189-298 153-250 (340)
436 PRK07984 enoyl-(acyl carrier p 94.0 0.37 7.9E-06 43.6 9.1 79 190-271 5-93 (262)
437 COG0421 SpeE Spermidine syntha 94.0 0.45 9.7E-06 43.4 9.5 101 188-293 75-189 (282)
438 PRK12480 D-lactate dehydrogena 94.0 0.6 1.3E-05 43.8 10.7 87 190-296 145-236 (330)
439 PRK06935 2-deoxy-D-gluconate 3 94.0 0.23 5E-06 44.6 7.8 79 190-272 14-101 (258)
440 PRK08303 short chain dehydroge 94.0 0.31 6.7E-06 45.2 8.8 34 190-224 7-41 (305)
441 PRK07985 oxidoreductase; Provi 94.0 0.68 1.5E-05 42.6 11.0 81 189-272 47-138 (294)
442 PRK08278 short chain dehydroge 94.0 0.27 5.9E-06 44.6 8.2 36 190-226 5-41 (273)
443 TIGR01963 PHB_DH 3-hydroxybuty 94.0 0.32 6.9E-06 43.3 8.6 79 191-272 1-88 (255)
444 TIGR00452 methyltransferase, p 94.0 0.23 5E-06 46.1 7.7 99 182-293 113-224 (314)
445 PRK07097 gluconate 5-dehydroge 94.0 0.25 5.4E-06 44.5 7.9 80 190-272 9-97 (265)
446 PRK05597 molybdopterin biosynt 93.9 0.26 5.6E-06 46.8 8.2 36 190-225 27-62 (355)
447 PF01113 DapB_N: Dihydrodipico 93.9 0.54 1.2E-05 37.2 8.8 92 193-298 2-101 (124)
448 PRK14194 bifunctional 5,10-met 93.9 0.52 1.1E-05 43.3 9.7 95 170-297 138-234 (301)
449 PRK12936 3-ketoacyl-(acyl-carr 93.9 0.49 1.1E-05 41.8 9.7 80 190-272 5-90 (245)
450 PRK14188 bifunctional 5,10-met 93.9 0.52 1.1E-05 43.3 9.7 94 170-297 137-233 (296)
451 PRK02472 murD UDP-N-acetylmura 93.9 0.34 7.3E-06 47.5 9.2 71 190-272 4-78 (447)
452 PRK08655 prephenate dehydrogen 93.9 0.82 1.8E-05 44.7 11.8 87 193-295 2-93 (437)
453 PRK13255 thiopurine S-methyltr 93.9 0.69 1.5E-05 40.6 10.2 102 186-293 33-154 (218)
454 PRK03562 glutathione-regulated 93.9 0.34 7.3E-06 49.6 9.4 76 191-274 400-476 (621)
455 PRK11579 putative oxidoreducta 93.8 0.66 1.4E-05 43.8 10.8 128 192-341 5-142 (346)
456 PRK06523 short chain dehydroge 93.8 0.24 5.3E-06 44.4 7.6 76 190-271 8-86 (260)
457 COG0673 MviM Predicted dehydro 93.8 0.84 1.8E-05 42.8 11.6 131 193-342 5-146 (342)
458 COG1648 CysG Siroheme synthase 93.8 0.78 1.7E-05 40.0 10.3 115 190-318 11-127 (210)
459 PRK05557 fabG 3-ketoacyl-(acyl 93.8 0.39 8.5E-06 42.4 8.8 80 190-272 4-93 (248)
460 PRK12938 acetyacetyl-CoA reduc 93.8 0.25 5.5E-06 43.8 7.6 80 190-272 2-91 (246)
461 PLN02256 arogenate dehydrogena 93.8 0.93 2E-05 42.0 11.4 95 184-295 29-128 (304)
462 PRK05650 short chain dehydroge 93.8 0.32 6.9E-06 44.0 8.3 77 193-272 2-87 (270)
463 PRK14027 quinate/shikimate deh 93.8 0.21 4.6E-06 45.7 7.1 44 189-232 125-168 (283)
464 PRK14106 murD UDP-N-acetylmura 93.8 0.32 7E-06 47.7 8.9 71 190-273 4-79 (450)
465 PF13823 ADH_N_assoc: Alcohol 93.7 0.078 1.7E-06 28.3 2.4 22 9-31 1-22 (23)
466 PRK12743 oxidoreductase; Provi 93.7 0.4 8.6E-06 43.0 8.8 79 191-272 2-90 (256)
467 PRK07792 fabG 3-ketoacyl-(acyl 93.7 0.49 1.1E-05 43.8 9.6 82 190-272 11-99 (306)
468 PLN02490 MPBQ/MSBQ methyltrans 93.7 0.42 9.2E-06 44.9 9.0 96 189-295 112-216 (340)
469 PRK06077 fabG 3-ketoacyl-(acyl 93.7 0.74 1.6E-05 40.9 10.4 103 191-297 6-143 (252)
470 PRK00216 ubiE ubiquinone/menaq 93.7 0.65 1.4E-05 40.9 10.0 102 184-296 45-160 (239)
471 PRK03659 glutathione-regulated 93.6 0.39 8.5E-06 49.0 9.4 92 192-292 401-496 (601)
472 TIGR02992 ectoine_eutC ectoine 93.6 0.83 1.8E-05 42.8 10.9 105 188-307 126-237 (326)
473 COG0111 SerA Phosphoglycerate 93.6 1.1 2.4E-05 41.8 11.6 88 190-294 141-233 (324)
474 PF13659 Methyltransf_26: Meth 93.6 0.31 6.7E-06 37.7 6.9 93 191-293 1-114 (117)
475 PRK05565 fabG 3-ketoacyl-(acyl 93.5 0.4 8.7E-06 42.4 8.4 79 191-272 5-93 (247)
476 PRK08063 enoyl-(acyl carrier p 93.5 0.43 9.3E-06 42.4 8.6 80 190-272 3-92 (250)
477 PRK05600 thiamine biosynthesis 93.5 0.37 8E-06 45.9 8.4 35 190-224 40-74 (370)
478 PF01209 Ubie_methyltran: ubiE 93.5 0.26 5.6E-06 43.8 6.9 103 184-297 41-156 (233)
479 TIGR00446 nop2p NOL1/NOP2/sun 93.5 1.7 3.7E-05 39.3 12.5 103 185-296 66-201 (264)
480 PRK06522 2-dehydropantoate 2-r 93.5 0.23 5E-06 45.8 6.9 94 193-294 2-100 (304)
481 COG0334 GdhA Glutamate dehydro 93.5 0.79 1.7E-05 43.6 10.3 61 163-226 180-241 (411)
482 PRK06113 7-alpha-hydroxysteroi 93.4 0.44 9.6E-06 42.6 8.6 80 190-272 10-98 (255)
483 PRK13984 putative oxidoreducta 93.4 0.38 8.3E-06 49.1 9.1 78 188-272 280-378 (604)
484 cd05212 NAD_bind_m-THF_DH_Cycl 93.4 0.94 2E-05 36.7 9.4 95 170-297 7-103 (140)
485 TIGR00872 gnd_rel 6-phosphoglu 93.4 0.84 1.8E-05 42.1 10.4 43 193-236 2-44 (298)
486 PLN02986 cinnamyl-alcohol dehy 93.4 0.51 1.1E-05 43.9 9.1 39 190-229 4-43 (322)
487 PRK12814 putative NADPH-depend 93.3 0.46 9.9E-06 49.0 9.4 77 189-273 191-289 (652)
488 cd01487 E1_ThiF_like E1_ThiF_l 93.3 0.37 8.1E-06 40.7 7.3 33 193-225 1-33 (174)
489 PRK08223 hypothetical protein; 93.3 0.32 7E-06 44.3 7.3 36 189-224 25-60 (287)
490 PLN02336 phosphoethanolamine N 93.3 0.64 1.4E-05 46.0 10.2 100 184-295 260-370 (475)
491 PRK14903 16S rRNA methyltransf 93.3 1.3 2.8E-05 43.2 12.0 102 185-296 232-368 (431)
492 PF01210 NAD_Gly3P_dh_N: NAD-d 93.3 0.68 1.5E-05 38.3 8.8 85 193-285 1-91 (157)
493 PRK10901 16S rRNA methyltransf 93.3 0.97 2.1E-05 44.1 11.2 103 184-295 238-373 (427)
494 PRK07775 short chain dehydroge 93.3 0.53 1.1E-05 42.7 8.9 80 190-272 9-97 (274)
495 PRK13403 ketol-acid reductoiso 93.3 1.2 2.6E-05 41.4 10.9 90 187-294 12-105 (335)
496 KOG1502 Flavonol reductase/cin 93.2 0.59 1.3E-05 43.3 8.9 75 190-271 5-87 (327)
497 PRK13656 trans-2-enoyl-CoA red 93.2 0.54 1.2E-05 44.7 8.8 81 189-273 39-142 (398)
498 PRK03612 spermidine synthase; 93.2 0.72 1.5E-05 46.2 10.3 102 189-294 296-415 (521)
499 PRK14904 16S rRNA methyltransf 93.2 0.84 1.8E-05 44.8 10.6 101 184-296 244-379 (445)
500 KOG1610 Corticosteroid 11-beta 93.2 0.93 2E-05 41.5 9.9 110 188-298 26-168 (322)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5e-68 Score=481.35 Aligned_cols=333 Identities=33% Similarity=0.513 Sum_probs=309.5
Q ss_pred cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
+++|||+++.++++++++++++.|+|+++||+|+|+|+|+|++|+| +.|.++...+|.|+|||.+|+|+++|++|+.||
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 4689999999999999999999999999999999999999999999 999999988999999999999999999999999
Q ss_pred CCCEEEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 85 EGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 85 ~Gd~V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
+||||.+ +...+|+.|++|++|++++|+..+.. |+..+| +||||+++++++++++|+++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~--gy~~~G------------------Gyaeyv~v~~~~~~~iP~~~ 140 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT--GYTTDG------------------GYAEYVVVPARYVVKIPEGL 140 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc--ceeecC------------------cceeEEEEchHHeEECCCCC
Confidence 9999998 88999999999999999999998774 888887 99999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
++++||.+.|++.|.|++|. ..+++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|++.+++||++++++..
T Consensus 141 d~~~aApllCaGiT~y~alk-~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 141 DLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ChhhhhhhhcCeeeEeeehh-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 99999999999999999875 5999999999999999999999999999998 999999999999999999999999977
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
+ ++..+.+++. +|++||+++ +..++.++++|+++ |+++.+|... .....++.+.++.+++++.||..++
T Consensus 219 ~---~~~~~~~~~~-----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 219 D---SDALEAVKEI-----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred C---chhhHHhHhh-----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 6 6777777653 999999999 77999999999998 9999999994 4556788888888999999998774
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
+.++++++++..++++++. +.+.++++++++||+.|++++. +|+||++
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 5789999999999999954 5479999999999999999988 6999864
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=5e-66 Score=457.92 Aligned_cols=362 Identities=41% Similarity=0.732 Sum_probs=342.9
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
+++||++.+++++||+++++++++|++|||+||+.++|+|++|.+ ..|..|.+ +|.++|||.+|+|++||++|++++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 468999999999999999999999999999999999999999999 99998877 9999999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
||+|+..+..+|+.|.+|++|.+++|...+-. ..|.+.+|+.+++-.|...++++|+++|+||.++++..++|++++.+
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999999999999975433 25788999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
++.++++.|..+|.+.++...+++++|++|.|+|.|++|++++|-|+..|+.+|++++.+++|++++++||+++++|.++
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcc-cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201 245 EPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 245 ~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
. +..+.+++++++ |+|++||++|+...+.+++.++.+. |..+.+|.... ...+++++.|... .+++|+.++.
T Consensus 240 ---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~ 313 (366)
T COG1062 240 ---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG 313 (366)
T ss_pred ---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence 4 699999999998 9999999999999999999999995 99999998865 6777888888855 9999999998
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
...+.+++.++++..+|+++++++++++++|+|+++||+.|.+++.+|-||.+
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 88899999999999999999999999999999999999999999999999875
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-65 Score=447.76 Aligned_cols=369 Identities=47% Similarity=0.826 Sum_probs=350.6
Q ss_pred CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201 4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
.++.++||++.+++++||.+|++.+++|+.+||+||+.++++|++|.+ +.|..+...||.|+|||++|+|+.+|++|+.
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 477899999999999999999999999999999999999999999999 9998888899999999999999999999999
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCccccccccccc--ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD 160 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp 160 (375)
+++||+|+-.....|+.|.+|+++..++|.+.+... .++..||..+|+.+|...+++.++.+|+||.++++..+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 999999999999999999999999999999988764 355579999999999999999999999999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
++.+++.++.+.|.++|+|.|++..++++||++|.|+|.|++|+++++-||+.|+.++++++.+++|.+.+++||+++++
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT 319 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 319 (375)
|+.+. ....++.+.+.|++ |+|+-|||.|+.+.+.+++.+...+||+-+++|.... ...+++++.++ ++.++.|+.
T Consensus 243 Np~d~-~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~ 319 (375)
T KOG0022|consen 243 NPKDL-KKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSA 319 (375)
T ss_pred Chhhc-cccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEe
Confidence 99862 23588999999997 9999999999999999999999999999999998765 78888899888 799999999
Q ss_pred eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
++.++.+.+++.+++...+++++++++++++.||+++++||++|.+++..|-|+.+
T Consensus 320 FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 320 FGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-60 Score=419.92 Aligned_cols=339 Identities=29% Similarity=0.468 Sum_probs=300.7
Q ss_pred eeeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
+|+|+++.+++ ++++++.|.|++ +|+||+|++.++|||+||+| +..+... -+.|+++|||.+|+|.++|+.|++
T Consensus 4 ~~~A~vl~g~~-di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKG-DIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccC-ceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 79999999998 599999999987 89999999999999999999 7766533 347999999999999999999999
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+|+||||++.|..+|+.|+.||+|.|++|++..+.+++- .+ |++++|++.++++++|||++
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp-~~------------------G~la~y~~~~~dfc~KLPd~ 143 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPP-VD------------------GTLAEYYVHPADFCYKLPDN 143 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccccCCC-cC------------------CceEEEEEechHheeeCCCC
Confidence 999999999999999999999999999999977642221 22 39999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
++++++|++. +++++++|. +++++++|++|||+|+|++|+++...||.+|+.+|++++..++|++.++++|++.+.+.
T Consensus 144 vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~ 221 (354)
T KOG0024|consen 144 VSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPS 221 (354)
T ss_pred Cchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeec
Confidence 9999999988 699999985 68999999999999999999999999999999999999999999999999999987765
Q ss_pred CCCC-cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 243 DDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 243 ~~~~-~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
.... ..++.+.++...+...+|+.|||+|....++.++..++.+ |.+++.|+.. ...+++......|++++.|++
T Consensus 222 ~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~f-- 297 (354)
T KOG0024|consen 222 SHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA-EEIQFPIIDVALKEVDLRGSF-- 297 (354)
T ss_pred cccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC-CccccChhhhhhheeeeeeee--
Confidence 5411 1334455555555556999999999998999999999998 9988888776 688999999888999999986
Q ss_pred cccCCC-CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEe
Q 017201 322 GIKTKS-DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLIT 374 (375)
Q Consensus 322 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~ 374 (375)
++.. .++.+++++++|++++.++++++|+++++.+||+.+..++ ..|++|.
T Consensus 298 --ry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 298 --RYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred --eeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence 3344 8999999999999999999999999999999999998877 4699885
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-60 Score=416.65 Aligned_cols=347 Identities=27% Similarity=0.421 Sum_probs=310.7
Q ss_pred CCC-CccceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEe
Q 017201 1 MSN-SQAITCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESA 76 (375)
Q Consensus 1 m~~-~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~v 76 (375)
|+. ..|.+++++.++.++. ++++.+++.|+++++||+|+++|+|||++|+| +.|.++...+|.|+|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 443 4588999999999988 45558999999999999999999999999999 9999999999999999999999999
Q ss_pred CCCCCCCCCCCEEEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201 77 GDEVKEVKEGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY 155 (375)
Q Consensus 77 G~~v~~~~~Gd~V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 155 (375)
|++|+.|++||||-+ ....+|.+|++|+.|++++|++.....+|+.+|| ...+|+||+|+++++.+
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DG-------------t~~~ggf~~~~~v~~~~ 147 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDG-------------TITQGGFQEYAVVDEVF 147 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCC-------------CCccCccceeEEEeeee
Confidence 999999999999975 6678999999999999999998777778888888 66678999999999999
Q ss_pred EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhc
Q 017201 156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAF 234 (375)
Q Consensus 156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~l 234 (375)
++++|++++++.||.+.|+..|+|.+| ...++.||++|.|.|+|++|++++|+||++|+ +|++++++. +|.+.++.|
T Consensus 148 a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L 225 (360)
T KOG0023|consen 148 AIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL 225 (360)
T ss_pred EEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence 999999999999999999999999987 56788999999999997799999999999999 999999987 666777889
Q ss_pred CCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCce
Q 017201 235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT 314 (375)
Q Consensus 235 g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 314 (375)
|++.+++..+ +++..+.+...+++ ++|-|.+. ..-.++.++.+++++ |+++++|.+.. +..++.+++..+.++
T Consensus 226 GAd~fv~~~~--d~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~-~~~~~~~~lil~~~~ 298 (360)
T KOG0023|consen 226 GADVFVDSTE--DPDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK-PLKLDTFPLILGRKS 298 (360)
T ss_pred CcceeEEecC--CHHHHHHHHHhhcC-cceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC-cccccchhhhcccEE
Confidence 9999888873 37888888887776 66666655 444789999999998 99999999985 999999999989999
Q ss_pred EEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
+.||.+++ +.+.++++++..++.+++. .+..+++++++||++|.+++. .|.||.+
T Consensus 299 I~GS~vG~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 299 IKGSIVGS---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred EEeecccc---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 99999885 4789999999999999864 468899999999999999998 5998863
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.6e-55 Score=420.27 Aligned_cols=359 Identities=34% Similarity=0.572 Sum_probs=305.7
Q ss_pred eeEEEEecCC--------CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201 9 CKAVVCWGLG--------EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE 79 (375)
Q Consensus 9 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~ 79 (375)
|||+++.+++ +.++++++|.|+|+++||+|||.+++||++|++ +.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 7899999866 358999999999999999999999999999999 887654 356899999999999999999
Q ss_pred CCCCCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201 80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK 158 (375)
Q Consensus 80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 158 (375)
++++++||+|++.+..+|+.|++|+.|.++.|+...... .|...+|...+...+..+.+..+.|+|+||+.++++.+++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 999999999999888899999999999999998754321 1222222222222222222222346999999999999999
Q ss_pred cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201 159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238 (375)
Q Consensus 159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~ 238 (375)
+|+++++++|+++++++.|||+++.+.+++++|++|||+|+|++|++++|+||..|+.+|++++++++|+++++++|++.
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999998878889999999999999999999999999999966999999999999999999999
Q ss_pred EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEE
Q 017201 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKG 317 (375)
Q Consensus 239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~ 317 (375)
++++.+ +++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|.... ...+++...++.+++++.+
T Consensus 240 ~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 240 TVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred EeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 998876 6788888888877 8999999999877899999999998 99999997653 3456777788889999999
Q ss_pred EeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201 318 TTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373 (375)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi 373 (375)
+....+...++++++++++.+|++++.++++++|+|+++++||+.+.+++..|.||
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 87655434467889999999999998888999999999999999999988875554
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.8e-55 Score=419.74 Aligned_cols=369 Identities=46% Similarity=0.858 Sum_probs=306.1
Q ss_pred CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCC
Q 017201 4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVK 81 (375)
Q Consensus 4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~ 81 (375)
+++++|||+++.++++++.++++|.|+|+++||+|||.++|+|++|++ +.|..+ ...+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 478899999999998779999999999999999999999999999999 888653 245789999999999999999999
Q ss_pred CCCCCCEEEeeccCCCCCCchhhccCccccccccccccc--ccCCCcccccccC--cceecccccCceeeeEEeecccEE
Q 017201 82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG--LMLDSTSRMSVRG--QKLYHIFSCSTWSEYMVIDANYVV 157 (375)
Q Consensus 82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g--~~~~g~~~~~~~~--~~~~~~~~~g~~a~~~~v~~~~~~ 157 (375)
.+++||+|++.+..+|+.|++|++++++.|+......+. ...+|...+...| ....+....|+|+||++++++.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 999999999999999999999999999999986532110 0001100000000 011112224699999999999999
Q ss_pred EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201 158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237 (375)
Q Consensus 158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~ 237 (375)
++|+++++++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 245 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT 245 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999986699999999999999999999
Q ss_pred EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEE
Q 017201 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLK 316 (375)
Q Consensus 238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~ 316 (375)
.+++..+ ...++.+.+++++++ ++|++||++|.+..+..++.++++++|+++.+|.... ....++...++ +++++.
T Consensus 246 ~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~ 322 (381)
T PLN02740 246 DFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSIT 322 (381)
T ss_pred EEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEE
Confidence 9988765 112477788888877 8999999999877899999999883399999997753 22344444444 788999
Q ss_pred EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
|+..+.+....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 98766544345688999999999999888899999999999999999988888999874
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=6.3e-55 Score=414.23 Aligned_cols=356 Identities=30% Similarity=0.554 Sum_probs=304.5
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
||||+++.+++++++++++|.|+|+++||+|||.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 69999999999889999999999999999999999999999999 877654 3478999999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|++.+..+|+.|++|++|.+++|............ ..|.......+.|+|+||+.++++.++++|++++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-------~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-------TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-------ccCcccccccccccccceEEEehhheEECCCCCChh
Confidence 9999999999999999999999999853211000000 000000001123699999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+|+++++.+.+||+++.+.+++++|++|||+|+|++|++++|+|+..|+.+|++++++++|+++++++|++.++++.+
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~-- 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG-- 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--
Confidence 999999999999988777788999999999999999999999999999956999999999999999999999998876
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
.++.+.+++++++.++|++||++|++..+..++.+++++ |+++.+|.... ...++++..++.+++++.+++.+....
T Consensus 231 -~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 308 (358)
T TIGR03451 231 -TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLP 308 (358)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCc
Confidence 678888888888778999999999877899999999998 99999997753 245677777777999999886443333
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
..+++++++++.+|++++.++++++|||+|+++||+.+++++..|++|.+
T Consensus 309 ~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 309 ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 56788899999999999888899999999999999999988888998864
No 9
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=6.6e-55 Score=415.27 Aligned_cols=364 Identities=43% Similarity=0.765 Sum_probs=302.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++...+++++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 7899999988889999999999999999999999999999999 888765556799999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
+|++.+..+|+.|.+|+.|.++.|...... ..|+..+|...+..+|...++..+.|+|+||+.++++.++++|++++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~ 161 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE 161 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence 999999999999999999999999874321 0133333322222233222223345799999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++++++++.|||+++.+.+++++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|++.+++..+ .
T Consensus 162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~ 240 (368)
T TIGR02818 162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-Y 240 (368)
T ss_pred HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-c
Confidence 999999999999998877889999999999999999999999999999867999999999999999999999998763 1
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
..++.+.+++++++ ++|++||++|++..+..+++++++++|+++.+|.... ....++...+. ++..+.++..+....
T Consensus 241 ~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 318 (368)
T TIGR02818 241 DKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKG 318 (368)
T ss_pred chhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCc
Confidence 13566778888877 8999999999877889999999873499999997642 33445555555 344567765443333
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
+.++.++++++.++++++.++++++|||+++++|++.+.+++..|++|.+
T Consensus 319 ~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 319 RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 45788999999999999888899999999999999999888778999875
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.8e-54 Score=412.50 Aligned_cols=365 Identities=45% Similarity=0.803 Sum_probs=307.1
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
.+|||+++...+++++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 378999999888889999999999999999999999999999999 8887665578999999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
||+|++.+..+|+.|++|++++++.|+..... ..|...+|...+..+|...++..+.|+|+||+.++++.++++|++++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 99999999999999999999999999874321 12333333222333333333344557999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
+++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998877889999999999999999999999999999867999999999999999999999998765
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
.++++.+.+++++++ ++|+|||++|+...+..+++++++++|+++.+|.... ....++...+. +..++.++..+.+
T Consensus 241 -~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~ 317 (368)
T cd08300 241 -HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGW 317 (368)
T ss_pred -cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEeccc
Confidence 112577888888877 8999999999877889999999874499999997642 23444554454 4456777766555
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
....+++++++++.++++++.++++++|+|+++++||+.+.+++..|++|+
T Consensus 318 ~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 318 KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 556678899999999999988889999999999999999988887899874
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.2e-54 Score=408.72 Aligned_cols=365 Identities=46% Similarity=0.874 Sum_probs=306.3
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
++|||+++.+++++++++++|+|+|+++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 489999999988889999999999999999999999999999999 8887665678999999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCccccccccccc-ccccC-CCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~-~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
||+|++.+..+|+.|..|++|+++.|....... .|... ++...+..+|...++..+.|+|+||++++++.++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999999999998753210 12211 1111111222222233344699999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
++++++++++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.+++..
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999888888999999999999999999999999999986799999999999999999999988876
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
+ ..+.+.+.+++++++ ++|++||++|....+..++.++++++|+++.+|.... ...+++...++ +++++.|+....
T Consensus 241 ~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 317 (369)
T cd08301 241 D-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGG 317 (369)
T ss_pred c-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCC
Confidence 4 113566777887776 8999999999877889999999993289999998753 34455655555 789999987665
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
+..+.+++++++++.++++++.++++++|||+++++||+.+.+++..|++|.
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 5445578899999999999888888999999999999999999988899873
No 12
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.4e-54 Score=407.88 Aligned_cols=364 Identities=53% Similarity=0.925 Sum_probs=308.0
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
+.|||+++.+.+++++++++|.|+++++||+|||.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 368999999888789999999999999999999999999999999 887654 567899999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|++.+..+|+.|++|++|.+++|+.......|...+++..++..|...+.+.+.|+|+||++++++.++++|+++++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 99999999999999999999999999986654345544443333322333222334579999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++.+++..+
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~- 238 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD- 238 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-
Confidence 9999999999999998878889999999999999999999999999999867999999999999999999999988764
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
...++.+.++++++ .++|+|||++|+...+..+++++++++|+++.+|...+...++++..++ +++++.++..+.+..
T Consensus 239 ~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 316 (365)
T cd08277 239 SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLI-LGRTWKGSFFGGFKS 316 (365)
T ss_pred ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHh-hCCEEEeeecCCCCh
Confidence 11245677777777 4899999999987788999999987339999999765334456666666 488999887665544
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
+.+++++++++.++++++.++++++|+|+|+++||+.+.+++..|++|+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 5578999999999999888889999999999999999988887899874
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=4.4e-53 Score=398.95 Aligned_cols=336 Identities=28% Similarity=0.450 Sum_probs=293.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+++ .++++++|.|+|+++||+||+.++++|++|++ +.+.... ..+|.++|||++|+|+++|++|+.+++|
T Consensus 1 mka~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDR-TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCC-ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 7899999776 59999999999999999999999999999999 7766432 3358899999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|++.+..+|+.|++|++|+++.|+..... +|...+| +|+||+.++++.++++|++++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~g~~~~G------------------~~ae~~~v~~~~~~~~P~~~~~~ 140 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAA-YGWNRDG------------------GHAEYMLVPEKTLIPLPDDLSFA 140 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCcccc-cccCCCC------------------cceeEEEechHHeEECCCCCCHH
Confidence 9999999999999999999999999876531 3443343 99999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+|+++++++.|||+++ ..+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++++
T Consensus 141 ~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~-- 217 (339)
T cd08239 141 DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ-- 217 (339)
T ss_pred HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--
Confidence 9999999999999987 5678999999999999999999999999999944999999999999999999999998876
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEeeccccC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 325 (375)
.+ .+.+.+++++.++|++||++|+...+..++++++++ |+++.+|..... .++. ..++.+++++.++...+
T Consensus 218 -~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 -DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred -ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC---
Confidence 45 667777777778999999999987778999999998 999999976532 3332 34667999999986432
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
.+++.++++++.++++++.++++++|+++++++||+.+.++..+|+||++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35789999999999999888899999999999999999887778999874
No 14
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.5e-53 Score=403.55 Aligned_cols=363 Identities=43% Similarity=0.829 Sum_probs=298.2
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
..|||+++.++++.++++++|+|+|+++||+|||.++|+|++|++ +.+.. .+|.++|||++|+|+++|++++++++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 469999999888779999999999999999999999999999999 76642 46789999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccC-CCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
||+|++.+..+|+.|++|++|++++|+.......|... +....+...|....++...|+|+||+.++++.++++|++++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~ 167 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP 167 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence 99999999999999999999999999874221011110 00000000010000011236999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
+++++.+++++.++|++++..+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++|++.++++++
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~ 247 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND 247 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence 99999999899999988777788999999999999999999999999999866888888999999999999999998764
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEeeccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGI 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 323 (375)
..+++.+.+++++++ ++|+|||++|....+..+++++++++|+++.+|.+.. ...+++ ..++.+++++.|+....+
T Consensus 248 -~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 248 -LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred -cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-CccccccHHHHhcCceEEeeecCCC
Confidence 113577778888776 8999999999877889999999994399999998753 233433 345669999999876554
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
....++.++++++.++++++.++++++|+|+++++|++.+.+++..|+||.+
T Consensus 325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~ 376 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM 376 (378)
T ss_pred chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence 4445788999999999999877899999999999999999988878999864
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-52 Score=393.24 Aligned_cols=336 Identities=23% Similarity=0.353 Sum_probs=281.7
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CC--CCCCCcccCcceeEEEEEeCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FP--APLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~--~~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
..+||+++.++++ +++++++.| ++++||+|||.++|||++|++ +.++ .+ ...+|.++|||++|+|+++ +++.
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4689999998875 999999987 589999999999999999999 7533 22 2457999999999999999 6889
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
|++||+|++.+..+|+.|++|++|+++.|+..... |..... ....|+|+||++++++.++++|++
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~ 143 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF--GSAMYF-------------PHVDGGFTRYKVVDTAQCIPYPEK 143 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee--eccccc-------------CCCCCceeeeEEechHHeEECCCC
Confidence 99999999999999999999999999999885542 221000 001249999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++++++.. .++++||+++. .....+|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++
T Consensus 144 l~~~~aa~~-~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~ 221 (343)
T PRK09880 144 ADEKVMAFA-EPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP 221 (343)
T ss_pred CCHHHHHhh-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 999776644 47789999874 4566789999999999999999999999999779999999999999999999999988
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
.+ +++.+.. +. .+ ++|+|||++|++..+..++++++++ |+++.+|... ...++++..++.|++++.++..
T Consensus 222 ~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~-- 291 (343)
T PRK09880 222 QN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG-APPEFPMMTLIVKEISLKGSFR-- 291 (343)
T ss_pred Cc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC-CCCccCHHHHHhCCcEEEEEee--
Confidence 76 4544322 22 23 6999999999877889999999998 9999999765 3456777778789999998753
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..+++++++++++++++++.++++++|+|+++++|++.+.+++. +|++|.+
T Consensus 292 --~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 292 --FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 24678999999999999988889999999999999999988765 6999874
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.9e-52 Score=392.33 Aligned_cols=344 Identities=27% Similarity=0.399 Sum_probs=285.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCc-ccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPR-VLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~-i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|+++++..++...++++.+.|.+.++||+|||.++|||+||+| +.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 6778888777655588887777789999999999999999999 998876655666 99999999999999 77889999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc-CCCCCc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV-DPSIDP 165 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~~ 165 (375)
|||++.+..+|+.|.+|+.|.++.|++..+. |....+ ..-.|+|+||+++|.++++++ |+++ .
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~-------------~~~~G~~aEyv~vp~~~~~~~~pd~~-~ 143 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY--GYAGLG-------------GGIDGGFAEYVRVPADFNLAKLPDGI-D 143 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCcccc--cccccc-------------CCCCCceEEEEEeccccCeecCCCCC-C
Confidence 9999999999999999999999999965432 222100 000149999999997655555 7887 5
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDD 244 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~ 244 (375)
.+++++..++.+++++.......+++++|+|+|+|++|++++++|+.+|+++|++++.+++|++++++ .+++.+++..+
T Consensus 144 ~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~ 223 (350)
T COG1063 144 EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223 (350)
T ss_pred hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc
Confidence 55555555899997764455566667799999999999999999999999999999999999999998 67777776655
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
++....+.+.+++.++|++|||+|...++.+++++++++ |+++.+|.+......++...++.|++++.|+... .
T Consensus 224 ---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~--~ 297 (350)
T COG1063 224 ---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP--S 297 (350)
T ss_pred ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccCC--C
Confidence 467788888999899999999999998899999999998 9999999987422267777888899999998421 2
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEeC
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI 375 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~~ 375 (375)
....++.+++++.+|++++.+++++.++++++++||+.+.+++ ..|+++.+
T Consensus 298 ~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 298 GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 3468999999999999999999999999999999999998754 46999864
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1e-50 Score=388.21 Aligned_cols=344 Identities=25% Similarity=0.346 Sum_probs=276.4
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPK-------STEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE 79 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~ 79 (375)
-|||+++.+++ .++++++|.|+|+ +|||+|||.++|||++|++ +.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~-~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPG-KVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCC-ceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 48999999888 4999999999874 6899999999999999999 877643 356899999999999999999
Q ss_pred CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccc----cccccCCCcccccccCcceecccccCceeeeEEeecc-
Q 017201 80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN- 154 (375)
Q Consensus 80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 154 (375)
|+++++||||++.+..+|+.|++|++|+++.|+..... .+|+...+ .-.|+|+||+.+++.
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC--------------CCCCceEEEEEechhh
Confidence 99999999999999999999999999999999974311 01211000 002599999999964
Q ss_pred -cEEEcCCCCCc----ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201 155 -YVVKVDPSIDP----SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229 (375)
Q Consensus 155 -~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~ 229 (375)
.++++|++++. .+++++.+++.+||+++ ..+++++|++|||.|+|++|++++|+|+.+|++.|++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 34677777899999976 4678999999999988999999999999999955666677889999
Q ss_pred HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh--------------hhHHHHHHhcccCCeEEEEEcc
Q 017201 230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--------------SLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 230 ~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
+++++|++.+....+ .++.+.+.+++++.++|++||++|.+ ..+++++++++++ |+++.+|.
T Consensus 225 ~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 225 QARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 999999975433333 46777788888777899999999985 3799999999998 99999998
Q ss_pred CC-Ccc-----------ccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCccee-eEeecccHHHHHHH
Q 017201 296 GV-DAM-----------VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQL 362 (375)
Q Consensus 296 ~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~ 362 (375)
+. ... .++....++.+++++.++. ....+.+.++++++.+|++++.++++ ++|||+++++||+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 63 111 2233444455667776632 11122346799999999999877777 78999999999999
Q ss_pred HcCCCeeEEEEeC
Q 017201 363 LKQPDCVKVLITI 375 (375)
Q Consensus 363 ~~~~~~~kvvi~~ 375 (375)
+.+++..|++|.+
T Consensus 378 ~~~~~~~Kvvi~~ 390 (393)
T TIGR02819 378 FDAGAAKKFVIDP 390 (393)
T ss_pred HhhCCceEEEEeC
Confidence 9888778999864
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.9e-50 Score=383.22 Aligned_cols=341 Identities=27% Similarity=0.441 Sum_probs=280.3
Q ss_pred ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
-|+.+.++.+.+..+.+++.+++.|+|+++||+|||.++|+|++|++ +.|.++...+|.++|||++|+|+++|++|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 88 (360)
T PLN02586 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF 88 (360)
T ss_pred chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence 46677777777777779999999999999999999999999999999 87766545678999999999999999999999
Q ss_pred CCCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 84 KEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 84 ~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
++||+|++.+. .+|+.|++|++|.+++|++..........+| ....|+|+||+.++++.++++|++
T Consensus 89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ 155 (360)
T PLN02586 89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDG-------------TKNYGGYSDMIVVDQHFVLRFPDN 155 (360)
T ss_pred CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCC-------------CcCCCccceEEEEchHHeeeCCCC
Confidence 99999986554 6899999999999999987543110000001 001249999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEEeC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFIN 241 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v~~ 241 (375)
+++++++++++.+.|||+++.....+++|++|||.|+|++|++++|+||.+|+ +|++++.+++++ +.++++|++.+++
T Consensus 156 ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~ 234 (360)
T PLN02586 156 LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLV 234 (360)
T ss_pred CCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEc
Confidence 99999999999999999987666667899999999999999999999999999 788877766654 5667899999988
Q ss_pred CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
..+ . +.+++.++ ++|+|||++|....++.++++++++ |+++.+|... ....+++..++.++..+.++..+
T Consensus 235 ~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~ 304 (360)
T PLN02586 235 STD---P---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIG 304 (360)
T ss_pred CCC---H---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcC
Confidence 654 2 23444443 6999999999876889999999998 9999999764 34567777777788888877643
Q ss_pred cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
+ ..+++++++++.+|++++. + ++|+|+|+++||+.+.+++. +|+||++
T Consensus 305 ~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 305 G---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred C---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 2 3568999999999999853 4 58999999999999988876 6999864
No 19
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.1e-50 Score=376.89 Aligned_cols=315 Identities=30% Similarity=0.385 Sum_probs=269.6
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++.+.+.+ ++++++|.|+|++|||+|||.++++|+.|++ +.|. .+...+|+++|.|++|+|+++|++|+.++
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 788999887765 8889999999999999999999999999999 8886 33456899999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||||+... .. + . .|+|+||+.++++.++++|+++|
T Consensus 81 ~GdrV~~~~-~~-----------------------~--~------------------~G~~AEy~~v~a~~~~~~P~~ls 116 (326)
T COG0604 81 VGDRVAALG-GV-----------------------G--R------------------DGGYAEYVVVPADWLVPLPDGLS 116 (326)
T ss_pred CCCEEEEcc-CC-----------------------C--C------------------CCcceeEEEecHHHceeCCCCCC
Confidence 999998653 10 0 1 24999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+++||++++++.|||+++....++++|++|||+|+ |++|.+++||||++|+ .++++++++++.++++++|+++++++.
T Consensus 117 ~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~ 195 (326)
T COG0604 117 FEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYR 195 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCC
Confidence 99999999999999999999899999999999987 9999999999999998 677777777888899999999999998
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
+ .++.+.++++++++++|+|+|++|+. .+..++.+|+++ |+++.+|..+ .....++...+..+.+++.+.....
T Consensus 196 ~---~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 196 E---EDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred c---ccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 8 78999999999999999999999998 888999999998 9999999887 3566677777777888888876543
Q ss_pred c---cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC-CCe-eEEEEeC
Q 017201 323 I---KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ-PDC-VKVLITI 375 (375)
Q Consensus 323 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~-~kvvi~~ 375 (375)
. ...+.+.++.+++.+|++++ .++.+|||++..++...... ++. +|+||++
T Consensus 271 ~~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 271 RDPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cchHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 2 11234566889999999994 47899999995555443333 344 6999974
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.9e-49 Score=375.34 Aligned_cols=335 Identities=26% Similarity=0.374 Sum_probs=286.3
Q ss_pred EEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201 12 VVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV 89 (375)
Q Consensus 12 ~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V 89 (375)
+++.+++++++++++|.|+|+++||+|||.++++|++|++ +.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4566777679999999999999999999999999999998 64443 234678999999999999999999887 99999
Q ss_pred EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC------CC
Q 017201 90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP------SI 163 (375)
Q Consensus 90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~------~~ 163 (375)
++.+..+|+.|.+|++|++++|..... .|...+ |+|+||+.++++.++++|+ ++
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~~~ 140 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM--PGNDMQ------------------GGFASHIVVPAKGLCVVDEARLAAAGL 140 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc--cCcCCC------------------CcccceEEechHHeEECCcccccccCC
Confidence 999999999999999999999986443 233333 4999999999999999999 89
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
++++++.+++++.+||+++. ..++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.+++..
T Consensus 141 ~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 218 (349)
T TIGR03201 141 PLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPK 218 (349)
T ss_pred CHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCc
Confidence 99999999999999999864 5789999999999999999999999999999 899999999999999999999998876
Q ss_pred CCCcccHHHHHHhhcCCCCcc----EEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201 244 DEPNKSISELVKGITHGMGVD----YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT 319 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (375)
+.+.+++.+.+++++++.++| +|||++|+...++.++++++++ |+++.+|.... ...+++..++.++.++.+++
T Consensus 219 ~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~ 296 (349)
T TIGR03201 219 DKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA-KTEYRLSNLMAFHARALGNW 296 (349)
T ss_pred cccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC-CcccCHHHHhhcccEEEEEe
Confidence 521235777788888877886 8999999987888999999998 99999997753 44666667777788888875
Q ss_pred eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.. ...+++++++++.+|++++.++++ +|||+++++||+.+++++. .|+++++
T Consensus 297 ~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 297 GC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 32 245789999999999998877765 7999999999999988876 4888764
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3e-49 Score=376.26 Aligned_cols=335 Identities=24% Similarity=0.410 Sum_probs=274.5
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201 11 AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV 89 (375)
Q Consensus 11 a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V 89 (375)
+++..+....+++++++.|+|+++||+|||.++|+|++|++ +.|.++...+|.++|||++|+|+++|++++++++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 44445554569999999999999999999999999999999 88766444578999999999999999999999999999
Q ss_pred EeeccC-CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccc
Q 017201 90 IPTYIG-ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 168 (375)
Q Consensus 90 ~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~a 168 (375)
++.+.. +|+.|++|++|++++|+.......+....| ....|+|+||+.++++.++++|++++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~a 155 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDSG 155 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCC-------------CcCCCccccEEEEchHHeEECCCCCCHHHc
Confidence 876654 699999999999999997543100000000 001249999999999999999999999999
Q ss_pred cccccchhhhhhhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHhhhcCCcEEeCCCCCC
Q 017201 169 SFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 169 a~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lg~~~v~~~~~~~ 246 (375)
++++++..|||+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|+++++++++ .++++++|++.++++.+
T Consensus 156 a~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-- 232 (375)
T PLN02178 156 APLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD-- 232 (375)
T ss_pred chhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--
Confidence 9999999999988754332 3689999999999999999999999999 78888876554 67888999999988654
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
. +.+++.++ ++|++||++|.+..+..++++++++ |+++.+|... ....+++..++.+++++.|+...+ .
T Consensus 233 -~---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~ 301 (375)
T PLN02178 233 -S---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG---M 301 (375)
T ss_pred -H---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC---H
Confidence 2 34455443 6999999999887789999999998 9999999765 345677777777999999886442 3
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.++.++++++.+|++++. + ++|||+++++||+.+.+++. +|+|+.+
T Consensus 302 ~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 302 KETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 568899999999999854 4 57999999999999988876 6999864
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-49 Score=372.71 Aligned_cols=337 Identities=26% Similarity=0.354 Sum_probs=283.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+++ .++++++|.|+| .++||+|||.++++|++|++ +.... ...+|.++|||++|+|+++|++++++++|
T Consensus 1 Mka~~~~~~~-~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDG-IVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCC-ceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 6899999877 499999999987 69999999999999999997 43221 12357899999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|++.+..+|+.|++|+.|.++.|..... .|...+ |+|+||+.++++.++++|++++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~------------------G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSRRD------------------GGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce--eccCCC------------------CccceeEEeehHHeEECcCCCCHH
Confidence 999999999999999999999999976432 233333 499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++.+. .++++++++ ....+++|++|||+|+|++|++++|+|+++|++.|++++++++++++++++|++.+++.++
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~-- 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE-- 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--
Confidence 998874 456677764 5678899999999999999999999999999955889999999999999999999998775
Q ss_pred cccHHHHHHhhcCCCCcc-EEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccch---HHHhhcCCceEEEEeecc
Q 017201 247 NKSISELVKGITHGMGVD-YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN---VIALACGGRTLKGTTFGG 322 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 322 (375)
.+ .+.+.+++.+.++| ++|||+|+...+..++++++++ |+++.+|.... ..+++ +..++.+++++.++....
T Consensus 215 -~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 -MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred -cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccc
Confidence 34 45567777666898 9999999887899999999998 99999997653 22333 234667899999986542
Q ss_pred cc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 IK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.. .+.+++++++++++|++++.++++++|+|+++++|++.+.+++. +|+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 11 13568889999999999888889999999999999999988775 6999874
No 23
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=7.8e-49 Score=367.85 Aligned_cols=321 Identities=23% Similarity=0.326 Sum_probs=272.8
Q ss_pred EEEecCC----CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 12 VVCWGLG----EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 12 ~~~~~~~----~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
+.+..++ ..++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 4444444 358999999999999999999999999999999 88876544457899999999999999999999999
Q ss_pred CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
|+|++.+. .+|+.|++|.+|+++.|+.... .|+..+| +|+||+.++++.++++|+++++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~lP~~~~~ 141 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWDTDG------------------GYAEYTTVPAAFAYRLPTGYDD 141 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcccCC------------------cceeEEEeccccEEECCCCCCH
Confidence 99987654 5799999999999999988654 2444344 9999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
++++.+++.+.|||+++. .+++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.+++..+
T Consensus 142 ~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~- 218 (329)
T TIGR02822 142 VELAPLLCAGIIGYRALL-RASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD- 218 (329)
T ss_pred HHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc-
Confidence 999999999999999874 6889999999999999999999999999999 8999999999999999999999987543
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
.. ..++|+++++.+..+.+..++++++++ |+++.+|........+++..++.+++++.++... .
T Consensus 219 --~~----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~---~ 282 (329)
T TIGR02822 219 --TP----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN---T 282 (329)
T ss_pred --cC----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC---C
Confidence 11 126899999888777899999999997 9999999753333456666667789999887532 2
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+.++.++++++.++++++ ++++|+|+|+++|++.+.+++. +|+||.
T Consensus 283 ~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 283 RADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred HHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 346788999999999863 5789999999999999988877 598873
No 24
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.3e-48 Score=370.55 Aligned_cols=333 Identities=28% Similarity=0.361 Sum_probs=266.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++..++.+++++++|.|+|+++||+|||.++++|++|++ +.|.++. ..+|.++|||++|+|+++|++ +.++
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 6889988655459999999999999999999999999999999 8876532 246889999999999999999 9999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|++.+..+|+.|.+|++|++++|........|... ..|+|+||+.++++.++++|++++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~-----------------~~G~~aey~~~~~~~~~~~P~~~~ 142 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKG-----------------LHGFMREYFVDDPEYLVKVPPSLA 142 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCC-----------------CCccceeEEEeccccEEECCCCCC
Confidence 999999998889999999999999999864321112110 124999999999999999999998
Q ss_pred cccccccccchhhhhhhhh------hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcC
Q 017201 165 PSDASFLSCGFTTGYGAAW------KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFG 235 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg 235 (375)
+ ++++..++++++.++. ...+.++|++|||+|+|++|++++|+||+.|+ +|+++++ +++|+++++++|
T Consensus 143 -~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~G 219 (355)
T cd08230 143 -D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELG 219 (355)
T ss_pred -c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcC
Confidence 3 3444445555544432 22336799999999999999999999999999 8999987 688999999999
Q ss_pred CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccch----HHHhhc
Q 017201 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLN----VIALAC 310 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~----~~~~~~ 310 (375)
++. +++.+ +++.+ .+ . ..++|+|||++|++..+..++++++++ |+++.+|...+ ...+++ ...++.
T Consensus 220 a~~-v~~~~---~~~~~-~~-~--~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 220 ATY-VNSSK---TPVAE-VK-L--VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred CEE-ecCCc---cchhh-hh-h--cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 987 45554 34433 21 1 237999999999877889999999998 99999998764 344555 345677
Q ss_pred CCceEEEEeeccccCCCCHHHHHHHHHcCCC----CCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 311 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF----KLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
|++++.|+... ..++++++++++.++.+ .+.++++++|+++++++||+.+.++. .|+||++
T Consensus 291 k~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNA---NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCC---chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 99999997533 24578889999988762 24567899999999999999987654 5999875
No 25
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.1e-47 Score=364.24 Aligned_cols=366 Identities=40% Similarity=0.718 Sum_probs=298.6
Q ss_pred ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
+-.+|||+++..++++++++++|.|++.++||+||+.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 45679999999988889999999999999999999999999999999 887653 3568899999999999999999999
Q ss_pred CCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
++||+|++.+..+|+.|++|.+++++.|++..... .|...++...++..|....+.++.|+|+||++++.+.++++|++
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 99999999999999999999999999998743210 12222222222222222222223579999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++++++++++++.+||+++...+++++|++|||+|+|++|++++++|+..|+.+|+++++++++++.++++|++.+++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999988788899999999999889999999999999998679999999999999999999999887
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhc-ccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEee
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTF 320 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
.+ ...++.+.+.+++++ ++|++||++|++..+..++..+ +++ |+++.+|.... ...++++..+. ++.++.++..
T Consensus 243 ~~-~~~~~~~~v~~~~~~-~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~ 318 (373)
T cd08299 243 QD-YKKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLL-TGRTWKGAVF 318 (373)
T ss_pred cc-cchhHHHHHHHHhCC-CCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHh-cCCeEEEEEe
Confidence 64 112366777777764 8999999999766778877766 465 99999997643 23455554344 6788888876
Q ss_pred ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
+.+.....+.++++.+.++.+++.++++++|+++++.+|++.+.+++..|+++++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred cCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 6554445677788888888877777788999999999999999888778998875
No 26
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.2e-47 Score=364.91 Aligned_cols=349 Identities=28% Similarity=0.427 Sum_probs=294.0
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC------
Q 017201 10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE------ 82 (375)
Q Consensus 10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~------ 82 (375)
||+++.++++.+++++.+.|+|+++||+|||.++++|++|++ ..|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 789999988789999999999999999999999999999999 8876653567889999999999999999986
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc-cEEEcCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDP 161 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~lp~ 161 (375)
+++||+|++.+..+|+.|.+|+.+.+++|...++. |...+. +. ....|+|+||++++++ .++++|+
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~-------~~----~~~~g~~a~~~~v~~~~~~~~lP~ 148 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASC-------DD----PHLSGGYAEHIYLPPGTAIVRVPD 148 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--cccccc-------cC----CCCCcccceEEEecCCCceEECCC
Confidence 99999999999999999999999999999876542 322110 00 0012599999999996 7999999
Q ss_pred CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201 162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241 (375)
Q Consensus 162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~ 241 (375)
+++..++++++++++|||+++.+....++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.+++
T Consensus 149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~ 228 (361)
T cd08231 149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATID 228 (361)
T ss_pred CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEc
Confidence 99999999998999999999876666679999999998999999999999999878999999999999999999999888
Q ss_pred CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEee
Q 017201 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTF 320 (375)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
.++....++...+++.+++.++|++||++|+...+..++++++++ |+++.+|.... ...+++...++.+++++.++..
T Consensus 229 ~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
T cd08231 229 IDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN 307 (361)
T ss_pred CcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence 765111223457788888779999999998866889999999998 99999987642 3445666666778999988763
Q ss_pred ccccCCCCHHHHHHHHHcC--CCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 321 GGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
. ..+++.++++++.++ .+++.++++++|+++++++|++.+.+++.+|+||.+
T Consensus 308 ~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 308 Y---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred C---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 3 345788899999888 666677789999999999999999888778999864
No 27
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1e-47 Score=364.39 Aligned_cols=338 Identities=25% Similarity=0.421 Sum_probs=280.7
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
.++|++.+++++++.+++++.|+|+++||+|||.++++|++|++ +.|.++...+|.++|||++|+|+++|++++++++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G 88 (357)
T PLN02514 9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG 88 (357)
T ss_pred eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence 49999999999999999999999999999999999999999999 88766545678999999999999999999999999
Q ss_pred CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
|+|++.+. .+|+.|.+|++|+++.|+...+...+....| ....|+|+||+.++.+.++++|+++++
T Consensus 89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~~ 155 (357)
T PLN02514 89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDG-------------KPTQGGFASAMVVDQKFVVKIPEGMAP 155 (357)
T ss_pred CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCC-------------ccCCCccccEEEEchHHeEECCCCCCH
Confidence 99986554 4799999999999999987532100000000 111259999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDD 244 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~ 244 (375)
++++++++++.|||+++......++|++|+|+|+|++|++++|+||+.|+ +|+++++++++++.+ +++|++.++++.+
T Consensus 156 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~ 234 (357)
T PLN02514 156 EQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD 234 (357)
T ss_pred HHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC
Confidence 99999999999999987666667899999999889999999999999999 788888887776554 5799988877644
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
. ..+.+.+. ++|++||++|....+..++++++++ |+++.+|... ...+++...++.+++++.++...+
T Consensus 235 ---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 235 ---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN-TPLQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred ---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC-CCCcccHHHHhhCCcEEEEEecCC--
Confidence 2 23444443 6999999999766889999999998 9999999775 345677777777999999987543
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..++.++++++.+++++ +++ ++|||+++.+||+.+.+++. +|+||.+
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 34688999999999876 445 58999999999999998877 5998864
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.5e-47 Score=361.43 Aligned_cols=336 Identities=27% Similarity=0.443 Sum_probs=291.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-C----------CCCCcccCcceeEEEEEe
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-A----------PLYPRVLGHEGVGVVESA 76 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~----------~~~p~i~G~e~~G~Vv~v 76 (375)
|||+++.+++ .++++++|.|+|+++||+||+.++++|++|++ +.+... . ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~-~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRK-DIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 6899998876 59999999999999999999999999999998 654321 1 136889999999999999
Q ss_pred CCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccE
Q 017201 77 GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYV 156 (375)
Q Consensus 77 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 156 (375)
|++++.+++||+|++.+..+|+.|.+|.++..+.|..... +|+.. ..|+|++|+.++.+.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~g~~a~~~~~~~~~~ 140 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLGG-----------------GGGGFAEYVVVPAYHV 140 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccCC-----------------CCCceeeEEEechHHe
Confidence 9999999999999999999999999999999999986432 12211 0249999999999999
Q ss_pred EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201 157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 236 (375)
Q Consensus 157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~ 236 (375)
+++|+++++++++.+ .++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+
T Consensus 141 ~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga 218 (351)
T cd08233 141 HKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA 218 (351)
T ss_pred EECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 999999999998876 5778999987 77899999999999999999999999999998779999999999999999999
Q ss_pred cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK 316 (375)
Q Consensus 237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
+.++++++ .++.+.+++.++++++|++||++|+...++.++++++++ |+++.+|... ...++++..+..+++++.
T Consensus 219 ~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~ 293 (351)
T cd08233 219 TIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE-KPISFNPNDLVLKEKTLT 293 (351)
T ss_pred CEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC-CCCccCHHHHHhhCcEEE
Confidence 99999887 678888888888778999999999766889999999997 9999999876 456777777778999999
Q ss_pred EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccH-HHHHHHHcCCCe--eEEEEe
Q 017201 317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI-DKAIQLLKQPDC--VKVLIT 374 (375)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~kvvi~ 374 (375)
++... ...++++++++++++++++.++++++|+++|+ ++|++.+.+++. +|+||.
T Consensus 294 g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 294 GSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87533 24679999999999999887888999999996 799999988775 699874
No 29
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.4e-47 Score=362.10 Aligned_cols=359 Identities=42% Similarity=0.747 Sum_probs=307.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
+||+++.+.+.++++++.+.|++++++|+|++.++++|++|++ +.+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 4799999888789999999999999999999999999999999 877654 34678999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
+|++.+..+|+.|.+|+++.+++|+..+... .|...+|+..++-+|...++..+.|+|++|+.++++.++++|++++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 9999988999999999999999998865421 244445555555555545555566899999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++.+++++.+||+++...+++++|++|||+|+|++|++++++|+..|+..|+++++++++.++++++|++.+++..+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-- 237 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-- 237 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc--
Confidence 999999999999998888889999999999988999999999999999956888888999999999999999988766
Q ss_pred cc--cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcc-cCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201 247 NK--SISELVKGITHGMGVDYCFECTGVPSLLSEALETTK-VGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 247 ~~--~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
. ++.+.++++++ .++|++||++|....+..++++++ ++ |+++.+|... .....++...+ .++.++.|+...+
T Consensus 238 -~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 313 (365)
T cd05279 238 -QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG 313 (365)
T ss_pred -ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence 4 67777888775 589999999987668899999999 87 9999998653 24566777666 5788888887665
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
+.....+..+++++.++.+++.++++++++++++++|++.+.+++..|++++
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 5556778899999999999876678899999999999999988877888763
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.9e-46 Score=354.80 Aligned_cols=360 Identities=32% Similarity=0.573 Sum_probs=295.1
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
|+|||+++.++++++++++.+.|+++++||+||+.++++|++|++ ..|.++ ..+|.++|||++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 579999999987789999999999999999999999999999999 877654 346889999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcce--ecccccCceeeeEEeecccEEEcCCC
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKL--YHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~--~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
||+|++.+. .|+.|.+|+.+..++|......- .|...+|+...+..+.+. .+.++.|+|++|++++++.++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998764 89999999999999998643210 111112111111000000 01223469999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++++++.+++++.||+.++...+.+++|++|||+|+|++|++++|+|++.|+.+|++++++++|.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988888899999999999889999999999999999679999999999999999999999988
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeec
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
++ .++.+.+.+++ +.++|+++|++|+...+..++++++++ |+++.+|.... ....++...+..+++++.++...
T Consensus 239 ~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (365)
T cd08278 239 KE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG 313 (365)
T ss_pred CC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence 76 67778888877 668999999999766889999999998 99999987632 34567777775688998877643
Q ss_pred cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
.....+.+.++++++.++++++.+++ ..++++++++|++.+.+++..|+||+
T Consensus 314 ~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 314 DSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 32223456788999999998653444 48999999999999988887899874
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=8.1e-47 Score=356.05 Aligned_cols=321 Identities=20% Similarity=0.228 Sum_probs=254.8
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC----CCCCcccCcceeEEEEEeCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA----PLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~----~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
..+|+++++++ .++++++|.|+ +++||+|||.++|||++|++ +.|.++. ..+|.++|||++|+|+++|.+ .
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPK-FFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccc-eEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 46899999988 49999999995 99999999999999999999 8876532 357999999999999998764 6
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+++||||++.+..+|+ |.+|. ..+.|....+ .|...+ |+|+||+.++++.++++|++
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~--~g~~~~------------------G~~aey~~v~~~~~~~vP~~ 134 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRF--RSSGYD------------------GFMQDYVFLPPDRLVKLPDN 134 (341)
T ss_pred cCCCCEEEECCCCCch-hcccc--hhccCCCcce--eEecCC------------------CceEEEEEEchHHeEECCCC
Confidence 9999999998887777 55664 4566865433 133333 39999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhh--hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201 163 IDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDF 239 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lg~~~v 239 (375)
+++++||.+. ++++||+++.. .+.+++|++|||+|+|++|++++|+|++ .|+.+|++++++++|++++++++.+..
T Consensus 135 l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~ 213 (341)
T cd08237 135 VDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL 213 (341)
T ss_pred CChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence 9999887555 78888887643 3457899999999999999999999996 665589999999999999987666533
Q ss_pred eCCCCCCcccHHHHHHhhcCCCCccEEEEccC---ChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201 240 INPDDEPNKSISELVKGITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK 316 (375)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
++ ++ ....++|+|||++| .+..+..++++++++ |+++.+|... ...++++..++.+++++.
T Consensus 214 ~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~ 277 (341)
T cd08237 214 ID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE-YPVPINTRMVLEKGLTLV 277 (341)
T ss_pred hh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC-CCcccCHHHHhhCceEEE
Confidence 21 11 11226999999999 445789999999998 9999999764 355677777778999999
Q ss_pred EEeeccccCCCCHHHHHHHHHcC---CCCCCcceeeEeecc---cHHHHHHHHcCCCeeEEEEeC
Q 017201 317 GTTFGGIKTKSDLPTLLDKCKNK---EFKLHQLLTHHVKLE---EIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~kvvi~~ 375 (375)
++... ...+++++++++.++ +.++.++++++|+++ ++.++++.+.++..+|+||++
T Consensus 278 g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (341)
T cd08237 278 GSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEW 339 (341)
T ss_pred Eeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEe
Confidence 98632 235688999999998 335668899999985 556666655554456999864
No 32
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.2e-47 Score=322.12 Aligned_cols=318 Identities=25% Similarity=0.304 Sum_probs=273.7
Q ss_pred CCCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCC
Q 017201 2 SNSQAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 2 ~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~ 78 (375)
....|+..|.++.++.|.. +++++.|.|+|.++|++||..|+|+|..|.. .+|-+...+.|+++|.|++|+|+.+|+
T Consensus 2 ~~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~ 81 (336)
T KOG1197|consen 2 AAASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGE 81 (336)
T ss_pred CCCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecC
Confidence 3446778899999887754 8899999999999999999999999999999 899887788999999999999999999
Q ss_pred CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201 79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK 158 (375)
Q Consensus 79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 158 (375)
+|+++++||||+.... +|.|+|++.+|...+++
T Consensus 82 gvtdrkvGDrVayl~~-----------------------------------------------~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 82 GVTDRKVGDRVAYLNP-----------------------------------------------FGAYAEEVTVPSVKVFK 114 (336)
T ss_pred CccccccccEEEEecc-----------------------------------------------chhhheeccccceeecc
Confidence 9999999999984321 14899999999999999
Q ss_pred cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201 159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237 (375)
Q Consensus 159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~ 237 (375)
+|+++++.+||++...+.|||.-+++..+++||++||++.+ |++|++++||++..|+ +++++.++.+|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999998889999999999999966 9999999999999999 999999999999999999999
Q ss_pred EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE-
Q 017201 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK- 316 (375)
Q Consensus 238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~- 316 (375)
+.++++. +|+.+.++++++++|+|+++|++|.+ .+..++.+|++. |+++.+|..++..-+++...+.-|.+++.
T Consensus 194 h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVR 268 (336)
T ss_pred ceeeccc---hhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccC-ceEEEeccccCCCCCeehhhcChhhhhhcc
Confidence 9999998 89999999999999999999999998 899999999998 99999998877333333333333444433
Q ss_pred EEeeccccCCCCH----HHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 317 GTTFGGIKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 317 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.+.++-...+..+ .++..++.+|.+++. +.++|||+++.+|+..+++... +|+++.
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEe
Confidence 2222211222222 356777889999855 8999999999999999998877 698875
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.7e-45 Score=347.50 Aligned_cols=342 Identities=26% Similarity=0.383 Sum_probs=285.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++ .+++++.+.|.+.++||+|||.++++|++|++ +.+..+...+|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~-~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIG-KVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCC-ccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 7899999887 48999999999999999999999999999999 777655456689999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCCc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP 165 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~~ 165 (375)
+|++.+..+|+.|..|..|+++.|..... |+.. + ....|+|+||+.++.+ .++++|+++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~---~~~~-~-------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~~ 142 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG---GWKF-S-------------NFKDGVFAEYFHVNDADANLAPLPDGLTD 142 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC---Cccc-c-------------CCCCcceeEEEEcchhhCceEECCCCCCH
Confidence 99998888999999999999999986421 1110 0 0112499999999974 89999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
++++.++..+.|||+++ ..+++++|++|||+|+|++|++++|+|+..|+..|+++++++++.++++++|++.+++..+
T Consensus 143 ~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~- 220 (351)
T cd08285 143 EQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN- 220 (351)
T ss_pred HHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC-
Confidence 99999998999999984 6788999999999988999999999999999966999999999999999999999998876
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchH--HHhhcCCceEEEEeecc
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNV--IALACGGRTLKGTTFGG 322 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 322 (375)
.++.+.+++++.++++|++||++|+...+..++++++++ |+++.+|.... ....++. +....+..++.+....
T Consensus 221 --~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 296 (351)
T cd08285 221 --GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP- 296 (351)
T ss_pred --CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC-
Confidence 677788888877778999999999876889999999998 99999987653 2234442 2223355666654321
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcc-eeeEeecccHHHHHHHHcCCCe--eEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKAIQLLKQPDC--VKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~--~kvvi~~ 375 (375)
...+.++++++++.+|++++... ..+.++++++++|++.+.+++. +|++|++
T Consensus 297 -~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 -GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 13467899999999999997443 4456999999999999988764 6999975
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4.7e-45 Score=347.26 Aligned_cols=360 Identities=36% Similarity=0.636 Sum_probs=300.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++..++.++++++++.|++++++|+|++.++++|+.|++ +.|..+ ..+|.++|+|++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 7999999988889999999999999999999999999999999 877654 35678899999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|+..+..+|++|.+|++++.+.|....+..+|...++...+..-|.......+.|+|++|+.++.+.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 99999999999999999999999987543222322222111111111111123446999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++.+++++.+||.++....++.+|++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.+++.+.
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~--- 236 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE--- 236 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---
Confidence 99999999999998888889999999999988999999999999999955999999999999999999999998876
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
.++...++++..+.++|++||++++...+..++++++++ |+++.+|.... ....++...+..++..+.++.+......
T Consensus 237 ~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (363)
T cd08279 237 DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR 315 (363)
T ss_pred ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence 678888888877678999999999766889999999998 99999986652 3556666666667788787765443345
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi 373 (375)
..++.++++++++++++.+++.++++++++.+|++.+.+++..|.||
T Consensus 316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 67888999999999987666788999999999999999888777765
No 35
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=4.2e-45 Score=352.54 Aligned_cols=331 Identities=20% Similarity=0.259 Sum_probs=267.4
Q ss_pred ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-cc-CCCCC------CCCCcccCcceeEEEEEeCC
Q 017201 7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CS-EGFPA------PLYPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~-g~~~~------~~~p~i~G~e~~G~Vv~vG~ 78 (375)
|.|||+++.+++ .++++++|.|+|+++||+|||.++|+|++|++ +. |.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~-~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKG-DLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCC-ceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 468999999988 59999999999999999999999999999999 63 43211 24688999999999999999
Q ss_pred CCC-CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc---
Q 017201 79 EVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--- 154 (375)
Q Consensus 79 ~v~-~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--- 154 (375)
+|+ .+++||||++.+...|+.|..|. + +|+..+| +|+||++++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~~~G------------------~~aey~~v~~~~~~ 128 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYTYPG------------------GLATYHIIPNEVME 128 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------ccccCCC------------------cceEEEEecHHhcc
Confidence 998 59999999999988899888772 1 1222333 99999999987
Q ss_pred -cEEEcCCCCCccccccc-ccc-hhhhhhhh--------hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CCeEEE
Q 017201 155 -YVVKVDPSIDPSDASFL-SCG-FTTGYGAA--------WKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHG--AAKIIG 220 (375)
Q Consensus 155 -~~~~lp~~~~~~~aa~l-~~~-~~ta~~~l--------~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G--~~~V~~ 220 (375)
.++++|+++++++|+.+ +.+ ..+++.++ .+.+++++|++|+|+|+ |++|++++|+|+++| +.+|++
T Consensus 129 ~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~ 208 (410)
T cd08238 129 QDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV 208 (410)
T ss_pred CCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence 68999999999998865 311 11233322 24578999999999985 999999999999975 457999
Q ss_pred EcCChhhHHHhhhc--------CCc-EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEE
Q 017201 221 IDKNPWKKEKGKAF--------GMT-DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 291 (375)
Q Consensus 221 ~~~~~~~~~~~~~l--------g~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv 291 (375)
++++++|+++++++ |++ .++++.+ ..++.+.+++++++.++|++||++|+.+.++.++++++++ |+++
T Consensus 209 ~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v 285 (410)
T cd08238 209 TDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN 285 (410)
T ss_pred EcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence 99999999999987 766 4676643 1467788888888889999999999877899999999997 8877
Q ss_pred EEccC-CC-ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee
Q 017201 292 VIGVG-VD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 369 (375)
Q Consensus 292 ~~g~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 369 (375)
.++.. .. ...+++...++.+++++.|+... ...+++++++++.+|++++.++++++|||+++++|++.+..+..+
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~g 362 (410)
T cd08238 286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGG 362 (410)
T ss_pred EEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCc
Confidence 76433 21 23567777788899999997633 235789999999999999988999999999999999999844446
Q ss_pred EEEEeC
Q 017201 370 KVLITI 375 (375)
Q Consensus 370 kvvi~~ 375 (375)
|+||.+
T Consensus 363 Kvvl~~ 368 (410)
T cd08238 363 KKLIYT 368 (410)
T ss_pred eEEEEC
Confidence 999863
No 36
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.7e-44 Score=340.34 Aligned_cols=333 Identities=23% Similarity=0.368 Sum_probs=278.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++ .++++++|.|+|+++|++||+.++++|++|++ +.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPN-SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCC-eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 6899999887 59999999999999999999999999999999 887765556789999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|++.+..+|+.|++|++++++.|...... ++..+ |+|+||+.++.+.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~ 139 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL--GVHRD------------------GGFSEYAVVPAKNAHRIPDAIADQY 139 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE--EEccC------------------CcceeeEEechHHeEECcCCCCHHH
Confidence 999999999999999999999999754321 22222 4999999999999999999999988
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
++ +...+.++++ +...+++++|++|||+|+|++|++++|+|+. +|+..|++++++++|.++++++|++.+++.++
T Consensus 140 a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~-- 215 (339)
T PRK10083 140 AV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ-- 215 (339)
T ss_pred Hh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--
Confidence 76 4457788885 5677899999999999999999999999996 59966888989999999999999999998776
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
.++.+.+.. .+.++|++||++|++..+..++++++++ |+++.+|.... ...++...+..+++++.++.. ..
T Consensus 216 -~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 216 -EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL----NA 286 (339)
T ss_pred -ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec----Ch
Confidence 556665543 2335679999999766889999999998 99999987653 334445455557777776542 24
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI 375 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvi~~ 375 (375)
..+.+++++++++++++.+++++.|+++++++|++.+.++. . .|+|+.+
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 57889999999999987656788999999999999997543 3 6999863
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.7e-44 Score=339.60 Aligned_cols=330 Identities=25% Similarity=0.409 Sum_probs=284.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++..++.+++++++|.|+++++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 7999999986679999999999999999999999999999999 877654445688999999999999999999999999
Q ss_pred EEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 88 IVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 88 ~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
+|++.+ ...|+.|.+|..|.++.|...... |+..+ |+|++|+.++.+.++++|+++++.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~--~~~~~------------------g~~a~~~~v~~~~~~~lp~~~~~~ 140 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT--GVTRD------------------GGYAEYMLAPAEALARIPDDLDAA 140 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc--CcccC------------------CcceeEEEEchhheEeCCCCCCHH
Confidence 998754 578999999999999999976542 33223 499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++.+++++.+||+++. ..++++|++|||+|+|++|++++++|+.+|+ +|++++++++++++++++|++.++++.+
T Consensus 141 ~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-- 216 (333)
T cd08296 141 EAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK-- 216 (333)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--
Confidence 99999999999999874 4589999999999999999999999999999 8999999999999999999999998876
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
.++.+.++++ .++|++||+.|....+..++++++++ |+++.+|... ...+++...++.+++++.++... ..
T Consensus 217 -~~~~~~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~ 287 (333)
T cd08296 217 -EDVAEALQEL---GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSG---TA 287 (333)
T ss_pred -ccHHHHHHhc---CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcC---CH
Confidence 5677777665 26999999997666889999999998 9999999775 35566666667799999997633 23
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.++..+++++.++++++ ++ +.++++++.+||+.+.+++. +|+||+
T Consensus 288 ~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 288 LDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 46778888888888763 34 58999999999999988877 598874
No 38
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=9.6e-44 Score=336.09 Aligned_cols=338 Identities=31% Similarity=0.456 Sum_probs=290.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++..++. +++++++.|+| .++||+|++.++++|++|++ +.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999988874 99999999986 89999999999999999999 88876555568899999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID 164 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~ 164 (375)
|+|++.+...|++|.+|..++.+.|....+. .|...+ |+|++|+.++.+ .++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------g~~~~~~~v~~~~~~~~~lp~~~~ 140 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNLID------------------GTQAEYVRIPHADNSLYKLPEGVD 140 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccccC------------------CeeeeEEEcccccCceEECCCCCC
Confidence 9999999999999999999999999864321 122222 499999999987 8999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
..+++.+++.+.+||.++....++++|++|||+|+|++|++++|+|+..|..+|++++++++|.++++++|++.++++.+
T Consensus 141 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 220 (345)
T cd08286 141 EEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK 220 (345)
T ss_pred HHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc
Confidence 99999999999999987777788999999999988999999999999999448999999999999999999999998876
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
.++.+.+.+++++.++|++||+++....++.++++++++ |+++.+|... ....+++..++.+++++.+....
T Consensus 221 ---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~--- 292 (345)
T cd08286 221 ---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD--- 292 (345)
T ss_pred ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc---
Confidence 567778888887778999999998776888999999998 9999998664 34566776666689998875321
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC---CeeEEEEeC
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP---DCVKVLITI 375 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~kvvi~~ 375 (375)
...+..++++++++.+++.+++++++++++++++++.+.+. ...|+||++
T Consensus 293 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 -TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred -hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 24678889999999998766678899999999999999876 346999975
No 39
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.3e-44 Score=336.41 Aligned_cols=302 Identities=21% Similarity=0.326 Sum_probs=242.8
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecC-CCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVC-HTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~-~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
++||+++.+++ .+++++.|.|+|+++||+|||.+++|| ++|++ +.|..+. ..+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~-~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPN-QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCC-eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 47899998887 599999999999999999999999996 79998 8776543 3579999999999999999998 5
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+++||||++.+ ..|..|.. | . .|+|+||+.++++.++++|++
T Consensus 79 ~~vGdrV~~~~----~~c~~~~~--------------~--~------------------~G~~aey~~v~~~~~~~ip~~ 120 (308)
T TIGR01202 79 FRPGDRVFVPG----SNCYEDVR--------------G--L------------------FGGASKRLVTPASRVCRLDPA 120 (308)
T ss_pred CCCCCEEEEeC----cccccccc--------------c--c------------------CCcccceEEcCHHHceeCCCC
Confidence 99999998632 22333211 0 0 149999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
++++. +.++ .+.|||+++.+ . ..++++|||+|+|++|++++|+||++|++.|++++.+++|++.++++ .++|+
T Consensus 121 ~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~ 193 (308)
T TIGR01202 121 LGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDP 193 (308)
T ss_pred CCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccCh
Confidence 98864 4454 57899998743 3 34689999999999999999999999996677778777887766543 34444
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
.+ + .+.++|+|||++|+...++.++++++++ |+++.+|.+. ....++...++.|++++.++...
T Consensus 194 ~~----~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~- 257 (308)
T TIGR01202 194 EK----D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEW- 257 (308)
T ss_pred hh----c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC-CCcccccchhhhcceEEEEeccc-
Confidence 32 1 2347999999999987789999999998 9999999865 34566666677788998876532
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
..+++++++++++++++++.++++++|||+|+++|++.+.+++. +|++|+
T Consensus 258 --~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 --QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 24578999999999999998889999999999999998876544 799874
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.3e-43 Score=339.66 Aligned_cols=353 Identities=29% Similarity=0.429 Sum_probs=288.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+++ .+++++++.|.| ++++|+||+.++++|++|++ +.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKG-DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCC-CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 7899999875 599999999988 59999999999999999999 88877655678999999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCccccccccccc-----ccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIAL-----NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKV 159 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-----~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~l 159 (375)
|+|++.+..+|+.|++|..+.+++|....... +|....+ ..|.........|+|++|+.++.+ .++++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l 154 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG-----IFGYSHLTGGYAGGQAEYVRVPFADVGPFKI 154 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc-----ccccccccCCCCCeeEEEEEcccccCeEEEC
Confidence 99999988899999999999999998644321 0111000 000000000013699999999987 89999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201 160 DPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239 (375)
Q Consensus 160 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v 239 (375)
|+++++++|++++..+.|||+++ ..+++++|++|||+|+|++|++++++|++.|+.+|+++++++++.+++++++...+
T Consensus 155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v 233 (386)
T cd08283 155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233 (386)
T ss_pred CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence 99999999999999999999987 78899999999999889999999999999998569999999999999999844467
Q ss_pred eCCCCCCcc-cHHHHHHhhcCCCCccEEEEccCCh---------------------hhHHHHHHhcccCCeEEEEEccCC
Q 017201 240 INPDDEPNK-SISELVKGITHGMGVDYCFECTGVP---------------------SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 240 ~~~~~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++..+ . ++.+.++++++++++|++||++|+. ..+..++++++++ |+++.+|...
T Consensus 234 i~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~ 309 (386)
T cd08283 234 INFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYG 309 (386)
T ss_pred EcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCC
Confidence 77665 4 4788888888877899999999752 3678899999998 9999998765
Q ss_pred CccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEeC
Q 017201 298 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI 375 (375)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~~ 375 (375)
.....++...++.+++++.+.... ..+.+.++++++.++++.+.+++.+.++++++.+|++.+.+++ .+|+||+.
T Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 310 GTVNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred CCcCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 433455665566689998886422 2456888999999999987666778999999999999998776 36999863
No 41
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.8e-43 Score=333.54 Aligned_cols=333 Identities=27% Similarity=0.429 Sum_probs=288.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++.++++++++++.+.|++.+++|+|++.++++|++|++ ..|.++ ...+|.++|+|++|+|+++|+++..++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 6899999887789999999999999999999999999999999 777654 245688999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+...|+.|..|+.|..++|...++. |+..+ |+|++|+.++++.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~~P~~ls 140 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP--GIGTD------------------GGFAEYLLVPSRRLVKLPRGLD 140 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc--CccCC------------------CcceeeEEecHHHeEECCCCCC
Confidence 999999999999999999999999999987763 44333 3999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++++.+++.+.|||+++... ..+.+|++|||+|+|++|++++++|+..| . +|+++++++++.+.++++|+++++++
T Consensus 141 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 219 (340)
T cd05284 141 PVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNA 219 (340)
T ss_pred HHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 999999999999999987665 46889999999999889999999999999 6 89999999999999999999999988
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
++ . +.+.+++++++.++|+++|++|+...+..++++++++ |+++.+|.... ..++....+.+++++.++...
T Consensus 220 ~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~- 291 (340)
T cd05284 220 SD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG- 291 (340)
T ss_pred Cc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc-
Confidence 76 4 7778888887778999999999866889999999998 99999986652 444555545688998887533
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
....+..++++++++.+++ ..+.|+++++++|++.+++++. .|+|+.+
T Consensus 292 --~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 --TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred --cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2456888999999999874 3457999999999999998877 5888764
No 42
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=3.1e-43 Score=333.23 Aligned_cols=335 Identities=27% Similarity=0.423 Sum_probs=281.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC---------CCCCcccCcceeEEEEEeCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA---------PLYPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~---------~~~p~i~G~e~~G~Vv~vG~ 78 (375)
|||+++.+++ .+++++.+.|++.+++|+||+.++++|++|++ +.|.... ..+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~-~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQ-DYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCC-ceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 6899999887 49999999999999999999999999999998 7775311 14677899999999999999
Q ss_pred CCC--CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc-c
Q 017201 79 EVK--EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-Y 155 (375)
Q Consensus 79 ~v~--~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~ 155 (375)
+++ .+++||+|+..+..+|+.|+.|.++++.+|.+... +|+... ..|+|++|+.++++ .
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~----------------~~g~~~~~~~~~~~~~ 141 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQNN----------------VNGGMAEYMRFPKEAI 141 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeeccC----------------CCCcceeeEEcccccc
Confidence 998 89999999999999999999999999999976432 233110 12499999999988 6
Q ss_pred EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201 156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235 (375)
Q Consensus 156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 235 (375)
++++|+++++++++.+ .+++|+|.++ +.+++++|++|||.|+|++|++++++|+++|+..|+++++++++.++++++|
T Consensus 142 ~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g 219 (350)
T cd08256 142 VHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFG 219 (350)
T ss_pred eEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcC
Confidence 7899999999999988 7899999987 7789999999999777999999999999999867888999999999999999
Q ss_pred CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHh-hcCCce
Q 017201 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL-ACGGRT 314 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~ 314 (375)
++.+++..+ .++.+.+.+++++.++|++||++|+...+..++++++++ |+++.+|.... ...++...+ ..++++
T Consensus 220 ~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 220 ADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD-PVTVDWSIIGDRKELD 294 (350)
T ss_pred CcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC-CCccChhHhhcccccE
Confidence 998888776 678888888888778999999999755788999999998 99999986542 333444333 246777
Q ss_pred EEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
+.++... ...+.+++++++++.+++.+++.+.|+++++++|++.+++++. .|+|+
T Consensus 295 i~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLG----PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccC----chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 7776533 2467889999999999876557889999999999999988776 48774
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.6e-43 Score=340.33 Aligned_cols=343 Identities=18% Similarity=0.178 Sum_probs=284.2
Q ss_pred ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC----------CCCCCcccCcc
Q 017201 5 QAITCKAVVCWG--LG---EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP----------APLYPRVLGHE 68 (375)
Q Consensus 5 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~----------~~~~p~i~G~e 68 (375)
.|.+|+|+++.. .+ +.++++++|.|+++++||+|++.++++|++|++ ..+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 577899999863 22 248899999999999999999999999999998 766411 01123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeee
Q 017201 69 GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148 (375)
Q Consensus 69 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 148 (375)
++|+|+++|++++.+++||+|++.+...|+.|..|.++.+++|..... +|+.. ..|+|++|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~-----------------~~g~~a~y 149 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYET-----------------NYGSFAQF 149 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccC-----------------CCCcceeE
Confidence 999999999999999999999999999999999999999999986544 24321 12499999
Q ss_pred EEeecccEEEcCCCCCcccccccccchhhhhhhhhhh--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 149 MVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 149 ~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
++++...++++|+++++++++.+++++.|||+++... +++++|++|||+|+ |++|++++++|+..|+ +++++++++
T Consensus 150 ~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~ 228 (393)
T cd08246 150 ALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSE 228 (393)
T ss_pred EEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence 9999999999999999999999999999999987654 68999999999998 9999999999999999 788889999
Q ss_pred hhHHHhhhcCCcEEeCCCCCC-------------------cccHHHHHHhhcCCC-CccEEEEccCChhhHHHHHHhccc
Q 017201 226 WKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGM-GVDYCFECTGVPSLLSEALETTKV 285 (375)
Q Consensus 226 ~~~~~~~~lg~~~v~~~~~~~-------------------~~~~~~~i~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~ 285 (375)
++.++++++|++.+++.++.+ ...+.+.+++++++. ++|++||++|+. .+..+++++++
T Consensus 229 ~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~ 307 (393)
T cd08246 229 EKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDR 307 (393)
T ss_pred HHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhcc
Confidence 999999999999988864310 013567788888887 899999999975 78999999999
Q ss_pred CCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201 286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365 (375)
Q Consensus 286 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 365 (375)
+ |+++.+|........++...++.++.++.+++... .+.+.+++++++++.+++ .++++|+++++++|++.+.+
T Consensus 308 ~-G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 381 (393)
T cd08246 308 G-GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHR 381 (393)
T ss_pred C-CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHh
Confidence 7 99999987653334566666767888888875432 346888999999998874 46789999999999999988
Q ss_pred C-Ce-eEEEEe
Q 017201 366 P-DC-VKVLIT 374 (375)
Q Consensus 366 ~-~~-~kvvi~ 374 (375)
+ +. .|+|+-
T Consensus 382 ~~~~~gkvvv~ 392 (393)
T cd08246 382 NQHHVGNMAVL 392 (393)
T ss_pred CccccceEEEe
Confidence 7 55 588763
No 44
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.4e-43 Score=331.71 Aligned_cols=340 Identities=31% Similarity=0.445 Sum_probs=284.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+++. +.+++.|.|.| .++||+||+.++++|++|++ +.|.++...+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999988774 89999999999 89999999999999999999 88877656678999999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID 164 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~ 164 (375)
|+|+..+..+|+.|.+|.++...+|.......+ .+ ....|+|++|++++++ .++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~g~~~~~~~v~~~~~~~~~lP~~~~ 142 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWK----LG-------------NRIDGGQAEYVRVPYADMNLAKIPDGLP 142 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccc----cc-------------cCCCCeeeEEEEecchhCeEEECCCCCC
Confidence 999999999999999999999999987442110 00 1123599999999987 9999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
.++++.+++++.|||+++ ...++++|++|||.|+|++|++++|+|+..|..+|+++++++++.++++++|++.+++.++
T Consensus 143 ~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 221 (347)
T cd05278 143 DEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN 221 (347)
T ss_pred HHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc
Confidence 999999999999999987 6788999999999888999999999999999657888888889999999999999998876
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc-ccchHHHhhcCCceEEEEeeccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
.++.+.+++.+++.++|++||++++...+..++++++++ |+++.+|...... ..... ..+.+++++.++...
T Consensus 222 ---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 294 (347)
T cd05278 222 ---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLG-EWFGKNLTFKTGLVP-- 294 (347)
T ss_pred ---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccc-hhhhceeEEEeeccC--
Confidence 567788888877778999999998855889999999998 9999998654321 11122 223477777765422
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe--eEEEEeC
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLITI 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvi~~ 375 (375)
....+.++++++.++.+++.+++...+++++++++++.+..++. .|+|++.
T Consensus 295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 24578889999999999866556788999999999999987765 4888863
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=7.5e-43 Score=330.63 Aligned_cols=336 Identities=28% Similarity=0.389 Sum_probs=285.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC------------CCCCCcccCcceeEEEEE
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP------------APLYPRVLGHEGVGVVES 75 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~------------~~~~p~i~G~e~~G~Vv~ 75 (375)
|||+++..++.+++++++|.|+++++||+||+.++++|++|++ +.|.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 7899999888889999999999999999999999999999999 777543 124567899999999999
Q ss_pred eCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201 76 AGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY 155 (375)
Q Consensus 76 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 155 (375)
+|++++.+++||+|+..+...|+.|..|.++.+++|.+..+. |... .|+|++|+.++.+.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~g~~~~~~~~~~~~ 140 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIFQ------------------DGGYAEYVIVPHSR 140 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eeec------------------cCcceeeEEecHHH
Confidence 999999999999999999999999999999999999774321 2222 24999999999999
Q ss_pred EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201 156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235 (375)
Q Consensus 156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 235 (375)
++++|+++++.+++.+++.+.|||+++......+++++|||+|+|++|++++|+|+..|+++|+++++++++.+.++++|
T Consensus 141 ~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g 220 (350)
T cd08240 141 YLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAG 220 (350)
T ss_pred eeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999999998876666679999999988999999999999999977899999999999999999
Q ss_pred CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL 315 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 315 (375)
++.+++.++ .++.+.+.++.++ ++|++||++|....+..++++++++ |+++.+|.... ....+...+..+++++
T Consensus 221 ~~~~~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~i 294 (350)
T cd08240 221 ADVVVNGSD---PDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGG-EATLPLPLLPLRALTI 294 (350)
T ss_pred CcEEecCCC---ccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCC-CCcccHHHHhhcCcEE
Confidence 988888766 5677777777777 8999999999766889999999998 99999987653 2233344444588888
Q ss_pred EEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 316 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.++.... .+++..++++++++.+++. ....+++++++++++.+.+++. .|+++.+
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 8765332 2567889999999998753 5668999999999999987766 5988763
No 46
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.7e-42 Score=324.74 Aligned_cols=336 Identities=24% Similarity=0.346 Sum_probs=278.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
||++++.++++.+++++.|.|+|+++||+||+.++++|++|++ +.+.. ....+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899998888889999999999999999999999999999998 66532 1234678899999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+..+|+.|.+|+.+.+++|++.+.. +...+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~iP~~l~ 140 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV--GVNRP------------------GAFAEYLVIPAFNVWKIPDDIP 140 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCccee--eecCC------------------CcceeeEEechHHeEECcCCCC
Confidence 999999999999999999999999999875432 32233 4999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
+.+++.+ ..+.++++++.. ...+|++|+|+|+|++|++++|+|++.|+++|+++++++++.++++++|++.+++.++
T Consensus 141 ~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~ 217 (341)
T PRK05396 141 DDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK 217 (341)
T ss_pred HHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 9888754 455666655432 3468999999988999999999999999866888888899999999999999998876
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
.++.+.++++++++++|++||+.|+...++.++++++++ |+++.+|.... ...++...+..+++++.++... .
T Consensus 218 ---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~--~ 290 (341)
T PRK05396 218 ---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGR--E 290 (341)
T ss_pred ---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC-CCcccHHHHhhcceEEEEEEcc--C
Confidence 678888888887779999999999877889999999998 99999987653 3344456666788888776421 1
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
....+..+++++.++ +++.+++.+.++++++++|++.+.+++.+|+|+++
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~ 340 (341)
T PRK05396 291 MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDW 340 (341)
T ss_pred ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEec
Confidence 123456688888888 54445577899999999999999877656999863
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.6e-42 Score=327.98 Aligned_cols=357 Identities=31% Similarity=0.488 Sum_probs=292.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC---CC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE---VK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~---~~ 84 (375)
|||+++..++.++++++.|+|.++++||+|++.++++|++|++ ..+.++. .+|.++|||++|+|+.+|+++.+ ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 6899999988789999999999999999999999999999999 7776543 56789999999999999999988 99
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccc-cc-cccCCCcccccccCcceec--ccccCceeeeEEeecccEEEcC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LN-GLMLDSTSRMSVRGQKLYH--IFSCSTWSEYMVIDANYVVKVD 160 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~-g~~~~g~~~~~~~~~~~~~--~~~~g~~a~~~~v~~~~~~~lp 160 (375)
+||+|+..+..+|+.|.+|+.+.+++|++...+ +. |-..+|...+... -.++ ....|+|++|+.++.+.++++|
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~P 157 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRL--DGGPVYMYSMGGLAEYAVVPATALAPLP 157 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCccccccc--CCCccccccCCcceeEEEechhhEEECC
Confidence 999999988899999999999999999975421 00 0000000000000 0000 0123599999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
+++++.+++.+++++.|||+++.+...+.++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.++
T Consensus 158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~ 237 (367)
T cd08263 158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237 (367)
T ss_pred CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence 99999999999999999999987778889999999998899999999999999994499998899999999999999999
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT 319 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 319 (375)
+.++ .++.+.+++..++.++|++||++++...+..++++++++ |+++.++.... ....++...++.+++++.++.
T Consensus 238 ~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 238 NAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred cCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 8876 678888888877778999999999865788999999998 99999986643 344566666656888877743
Q ss_pred eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
. ....+.+..+++++.++.+++.+.+++.++++++.++++.+.+++. +|+||+
T Consensus 314 ~--~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 314 G--ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred C--CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1 1123467889999999999876667889999999999999988876 588874
No 48
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.3e-42 Score=325.64 Aligned_cols=309 Identities=21% Similarity=0.223 Sum_probs=257.2
Q ss_pred eeEEEEecCCC-----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201 9 CKAVVCWGLGE-----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK 81 (375)
Q Consensus 9 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~ 81 (375)
|||+++.+++. .++++++|.|+|+++||+||+.++++|++|++ +.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998875 47888999999999999999999999999999 8776543 45789999999999999999998
Q ss_pred C-CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201 82 E-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD 160 (375)
Q Consensus 82 ~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp 160 (375)
+ +++||+|++.+.. + |+|+||+.++++.++++|
T Consensus 81 ~~~~vGd~V~~~~~~----------------------------~------------------g~~a~~~~v~~~~~~~iP 114 (324)
T cd08291 81 AQSLIGKRVAFLAGS----------------------------Y------------------GTYAEYAVADAQQCLPLP 114 (324)
T ss_pred ccCCCCCEEEecCCC----------------------------C------------------CcchheeeecHHHeEECC
Confidence 6 9999999853210 1 399999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201 161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238 (375)
Q Consensus 161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~ 238 (375)
+++++++++++++.+.|||.. ....+. ++++++|+ |+ |++|++++|+|+.+|+ +|++++++++++++++++|++.
T Consensus 115 ~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 191 (324)
T cd08291 115 DGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEY 191 (324)
T ss_pred CCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcE
Confidence 999999999888888999754 455555 56666665 55 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-cchHHHhhcCCceEEE
Q 017201 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKG 317 (375)
Q Consensus 239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~~~~ 317 (375)
++++.+ .++.+.+++++.++++|++||++|+. ....++.+++++ |+++.+|....... .++...++.+++++.+
T Consensus 192 ~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 192 VLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 998876 67888898888877899999999987 567889999997 99999997643222 3556666779999998
Q ss_pred EeeccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 318 TTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 318 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+....+.. .+.+.+++++++ ++++ +.++++|+|+++.+|++.+.+++. +|++|.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 267 FWLTTWLQKLGPEVVKKLKKLVK-TELK--TTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEHHHhhcccCHHHHHHHHHHHh-Cccc--cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 87654322 234677788887 7766 568899999999999999988766 699874
No 49
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=7e-42 Score=323.17 Aligned_cols=339 Identities=30% Similarity=0.423 Sum_probs=282.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPK-STEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~-~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++..++ .++++++++|.|. ++||+|++.++++|+.|++ ..|.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6899998775 6999999999985 9999999999999999999 777654 3457889999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID 164 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~ 164 (375)
|+|++.+..+|+.|.+|++++...|++.-. +|.. + .....|+|++|++++.+ .++++|++++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL--FGYA--G------------SPNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc--cccc--c------------cCCCCCceeEEEEcccccCceEECCCCCC
Confidence 999998989999999999999999976422 1110 0 00012589999999865 9999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
+++++.++++++|||+++. ..++.+|++|||+|+|++|++++++|+..|+.+|+++++++++.+.++++|+. .++.+.
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~ 220 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED 220 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC
Confidence 9999999999999999875 57899999999998899999999999999965799998889999999999986 455554
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
.++...++++++++++|++||++++...+..++++++++ |+++.+|.........+....+.+++++.+.. ..
T Consensus 221 ---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 293 (344)
T cd08284 221 ---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CP 293 (344)
T ss_pred ---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CC
Confidence 567788888888778999999999766889999999997 99999997754333445555566888877542 12
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
....+..+++++.++++++.+++.+.+++++++++++.+.+++..|+|++
T Consensus 294 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 294 VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 35678899999999999875557789999999999999887666898875
No 50
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=5.6e-42 Score=324.03 Aligned_cols=338 Identities=25% Similarity=0.398 Sum_probs=289.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++..++.++++++.+.|.+.+++|+||+.++++|++|+. ..|..+...+|.++|+|++|+|+.+|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 7999999888789999999999999999999999999999999 877765556688999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCCc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP 165 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~~ 165 (375)
+|+..+..+|++|++|+.|..+.|++... .|+..+ |+|++|+.++.. .++++|++++.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~~~iP~~~~~ 140 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFTHP------------------GSFAEYVAVPRADVNLVRLPDDVDF 140 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccCCC------------------CcceeEEEcccccCceEECCCCCCH
Confidence 99987778899999999999999997532 122223 499999999974 89999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
++++.++..+.|||+++....++.++++|+|+|+|++|++++++|+..|+ +|+++++++++.+.++++|++.+++.++
T Consensus 141 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~- 218 (345)
T cd08260 141 VTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE- 218 (345)
T ss_pred HHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-
Confidence 99999999999999988777889999999999999999999999999999 8999999999999999999999988753
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc--ccchHHHhhcCCceEEEEeeccc
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM--VPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
..++.+.+.++..+ ++|++||++|+...+..++++++++ |+++.+|...... ..++...+..+++++.+....
T Consensus 219 -~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 219 -VEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred -chhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 14677778777777 8999999998766888999999998 9999998765321 456666666688888886532
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
....++.++++++++++.+.+.+.+.++++++++|++.+.+++. +|+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 34578889999999998866556789999999999999988776 588874
No 51
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.7e-42 Score=331.07 Aligned_cols=344 Identities=19% Similarity=0.210 Sum_probs=283.1
Q ss_pred ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC----------CCCCC-cccCc
Q 017201 5 QAITCKAVVCWG--LG---EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP----------APLYP-RVLGH 67 (375)
Q Consensus 5 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~----------~~~~p-~i~G~ 67 (375)
.|.+|||+++.. ++ +.+++++.|.|.|.++||+||+.++++|++|++ ..+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 456899999964 44 349999999999999999999999999999987 554321 11223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceee
Q 017201 68 EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSE 147 (375)
Q Consensus 68 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~ 147 (375)
|++|+|+++|++++.+++||+|++.+...|+.|+.|+.+++++|+....+ |+.. ..|+|++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-----------------~~g~~ae 144 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW--GYET-----------------NFGSFAE 144 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc--cccC-----------------CCccceE
Confidence 99999999999999999999999999999999999999999999765432 2211 1249999
Q ss_pred eEEeecccEEEcCCCCCcccccccccchhhhhhhhhh--hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 148 YMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 148 ~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
|+.++.+.++++|+++++++++.+++.+.+||+++.. .+++.+|++|||+|+ |++|++++++|+++|+ ++++++++
T Consensus 145 ~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~ 223 (398)
T TIGR01751 145 FALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSS 223 (398)
T ss_pred EEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCC
Confidence 9999999999999999999999999999999998754 477899999999998 9999999999999999 78888889
Q ss_pred hhhHHHhhhcCCcEEeCCCCCC-------------------cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhccc
Q 017201 225 PWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 285 (375)
Q Consensus 225 ~~~~~~~~~lg~~~v~~~~~~~-------------------~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 285 (375)
+++.+.++++|++.++|+.+++ ...+.+.+.++++++++|++||++|.. .+..+++++++
T Consensus 224 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~ 302 (398)
T TIGR01751 224 PEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRR 302 (398)
T ss_pred HHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhcc
Confidence 9999999999999999875410 012556677788777899999999975 78999999999
Q ss_pred CCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201 286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365 (375)
Q Consensus 286 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 365 (375)
+ |+++.+|........++...++.++.++.++.+.. ..++++++++++++++.+ .+++++++++++++++.+.+
T Consensus 303 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 376 (398)
T TIGR01751 303 G-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR 376 (398)
T ss_pred C-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence 8 99999997754345566666666788887765432 234778999999999874 37789999999999999987
Q ss_pred CCe-eEEEEeC
Q 017201 366 PDC-VKVLITI 375 (375)
Q Consensus 366 ~~~-~kvvi~~ 375 (375)
++. .|+|+.+
T Consensus 377 ~~~~gkvvv~~ 387 (398)
T TIGR01751 377 NHHQGNVAVLV 387 (398)
T ss_pred CCCCceEEEEe
Confidence 776 5888763
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.5e-41 Score=321.17 Aligned_cols=335 Identities=30% Similarity=0.444 Sum_probs=280.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||++++.++ .+++++.|.|.| +++||+||+.++++|++|++ +.|..+. ..|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPG-DIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCC-ceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 6899998877 499999999986 89999999999999999999 8776542 457899999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID 164 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~ 164 (375)
|+|++....+|+.|..|..++.+.|.....+ |...+| +|++|+.++.+ .++++|++++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW--GAFVDG------------------GQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcc--cCCCCC------------------ceEEEEEcchhhCceEECCCCCC
Confidence 9998866788999999999999999864332 333333 99999999875 9999999998
Q ss_pred ccccc-----ccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201 165 PSDAS-----FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239 (375)
Q Consensus 165 ~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v 239 (375)
++.+. ++...+.+|++++ ..+++++|++|+|+|+|++|++++|+|++.|+..++++++++++.++++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 83221 2225678888876 47789999999999889999999999999999668999988889999999999999
Q ss_pred eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT 319 (375)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (375)
+++.+ .++.+.+.+++++.++|+++|++|+...+..++++++++ |+++.+|.... ...++....+.+++++.+..
T Consensus 218 ~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG-GVELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC-CCccCHHHHHhcceEEEEec
Confidence 99876 678888888888779999999998877899999999997 99999987652 44556544456899988753
Q ss_pred eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
.. ....+.++++++.++++++.+++.+.+++++++++++.+.+++..|++|+
T Consensus 293 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 293 AP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred CC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 22 23578889999999999876667789999999999999988777899986
No 53
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.2e-41 Score=318.95 Aligned_cols=334 Identities=29% Similarity=0.497 Sum_probs=284.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++..++ .+++++.++|++.++||+|+|.++++|+.|+. ..+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPG-RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCC-ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 6899998886 59999999999999999999999999999999 777665555688999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|+..+..+|+.|..|+.++.+.|...+.. ++.. .|+|++|++++++ ++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~g~~~~~v~v~~~-~~~~p~~~~~~~ 138 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVL--GVHR------------------DGGFAEYIVVPAD-ALLVPEGLSLDQ 138 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCee--eecC------------------CCcceeEEEechh-eEECCCCCCHHH
Confidence 999988889999999999999999643221 1111 2499999999999 999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++++ ..+.++++++ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+
T Consensus 139 aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--- 212 (337)
T cd08261 139 AALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--- 212 (337)
T ss_pred hhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---
Confidence 9877 4778888876 77899999999999889999999999999999 8999999999999999999999998876
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS 327 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (375)
.++.+.+.+++++.++|++||++|+...+..++++++++ |+++.+|... ....++...+..+++++.++. ....+
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~ 287 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK-GPVTFPDPEFHKKELTILGSR---NATRE 287 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC-CCCccCHHHHHhCCCEEEEec---cCChh
Confidence 678888888887778999999998766889999999997 9999998665 344555556666788877653 12345
Q ss_pred CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 017201 328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI 375 (375)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvi~~ 375 (375)
.+..++++++++.+++.+.+...+++++++++++.+.+++ . .|+|+++
T Consensus 288 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 288 DFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 6888999999999986434677999999999999998873 4 6999864
No 54
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.3e-41 Score=318.02 Aligned_cols=317 Identities=25% Similarity=0.378 Sum_probs=268.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++ .+++++++.|+++++||+||+.++++|++|++ ..|.++ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6899998876 69999999999999999999999999999999 777654 5788999999999999987 67999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccc-cCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGL-MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
+|...+..+|+.|++|+.+.+..|...+.. ++ ..+ |+|++|++++.+.++++|++++.+
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~~ 133 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL--GIVDRD------------------GAFAEYLTLPLENLHVVPDLVPDE 133 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCccc--CccCCC------------------CceEEEEEechHHeEECcCCCCHH
Confidence 999999999999999999999999886543 32 123 399999999999999999999998
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++.+ ..+.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|++.+++..+
T Consensus 134 ~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~-- 208 (319)
T cd08242 134 QAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA-- 208 (319)
T ss_pred Hhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--
Confidence 88864 34556665 4577889999999999889999999999999999 7999999999999999999988877644
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
. +.+.++|++||++|+...+..++++++++ |+++..+... ....++...+..++.++.++..
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~------ 270 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA-GPASFDLTKAVVNEITLVGSRC------ 270 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCccCHHHheecceEEEEEec------
Confidence 1 34458999999998866889999999997 9999876544 3456666667778888887642
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
..+.++++++.++++++.+++.+.|+++++++|++.++++..+|+||+.
T Consensus 271 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 271 GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 2378899999999997666788999999999999999877667999863
No 55
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.3e-41 Score=325.81 Aligned_cols=338 Identities=25% Similarity=0.403 Sum_probs=275.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC------C-CCCCCcccCcceeEEEEEeCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF------P-APLYPRVLGHEGVGVVESAGDEV 80 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~------~-~~~~p~i~G~e~~G~Vv~vG~~v 80 (375)
+.+.++... .++++++|.|+++++||+||+.++++|++|++ +.+.. + ...+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 445555533 59999999999999999999999999999998 66321 1 13567899999999999999999
Q ss_pred CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201 81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD 160 (375)
Q Consensus 81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp 160 (375)
+.+++||+|++.+..+|+.|+.|..+++..|..... .|+..+ |+|++|+.++++.++++|
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~------------------g~~~~~v~v~~~~~~~lP 166 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFSAD------------------GAFAEYIAVNARYAWEIN 166 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeecCC------------------CcceeeEEechHHeEECC
Confidence 999999999999999999999999999999986432 233223 499999999999999999
Q ss_pred CCC-------Ccccccccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 161 PSI-------DPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 161 ~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
+++ +.. +++++.++++||+++... +++++|++|||+|+|++|++++++|+..|+.+|++++++++|.+.++
T Consensus 167 ~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~ 245 (384)
T cd08265 167 ELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAK 245 (384)
T ss_pred ccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 864 344 555666889999987655 68999999999988999999999999999867999999999999999
Q ss_pred hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC
Q 017201 233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 311 (375)
Q Consensus 233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~ 311 (375)
++|++.++++++....++...+++++.++++|+|+|++|+. ..+..++++++++ |+++.+|.... ...+++..+..+
T Consensus 246 ~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~ 323 (384)
T cd08265 246 EMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT-TVPLHLEVLQVR 323 (384)
T ss_pred HcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC-CCcccHHHHhhC
Confidence 99999988876411136788888888888999999999863 4678999999997 99999986642 334445556567
Q ss_pred CceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201 312 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373 (375)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi 373 (375)
..++.++.... ....+.+++++++++.+++.+++++.|+++++++|++.+.++...|+|+
T Consensus 324 ~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 324 RAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred ceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 77887765321 2346889999999999987666778999999999999987665568876
No 56
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=9e-42 Score=321.56 Aligned_cols=334 Identities=25% Similarity=0.447 Sum_probs=279.2
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201 10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDI 88 (375)
Q Consensus 10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~ 88 (375)
|+++.+..+..+++++++.|+|.++||+||+.++++|++|++ +.|......+|.++|||++|+|+++|+++..+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 567788888779999999999999999999999999999999 8887655567899999999999999999999999999
Q ss_pred EEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 89 VIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 89 V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
|++ .....|++|++|.++..++|++......|....+ ....|+|+||+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 147 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDG-------------TITQGGYADHIVVDERFVFKIPEGLDSAA 147 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccccCC-------------CcCCCcceeEEEechhheEECCCCCCHHH
Confidence 984 4456899999999999999988654321111101 12235999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++.+++.+.+||+++. ..++++|++|+|.|+|++|++++++|+..|+ +|+++++++++.++++++|++.+++..+
T Consensus 148 aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--- 222 (337)
T cd05283 148 AAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--- 222 (337)
T ss_pred hhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---
Confidence 9999999999999864 4569999999998889999999999999999 9999999999999999999998887765
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS 327 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (375)
.++... . +.++|++||++++...+..++++++++ |+++.+|.... ...+++..++.+++++.++.... .+
T Consensus 223 ~~~~~~---~--~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMKK---A--AGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhhh---c--cCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC-CCccCHHHHhcCceEEEEecccC---HH
Confidence 333221 1 347999999999875589999999997 99999997653 33667777677999999887542 35
Q ss_pred CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.+..+++++.++++++ .+ +.++++++++||+.+.+++. +|+|++
T Consensus 293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 7888999999999874 34 68999999999999998887 598874
No 57
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.6e-41 Score=319.12 Aligned_cols=336 Identities=29% Similarity=0.442 Sum_probs=285.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++ .+.+++.+.|++.+++|+||+.++++|+.|+. +.+..+.+..|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPN-DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCC-ceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 6899998887 59999999999999999999999999999999 777654344578899999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc-----EEEcCCC
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY-----VVKVDPS 162 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~lp~~ 162 (375)
+|+..+..+|++|+.|..++.++|....+. |...+ |+|++|+.++++. ++++|++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~v~v~~~~~~~~~~~~lP~~ 139 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNLYD------------------GGFAEYVRVPAWAVKRGGVLKLPDN 139 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee--ccCCC------------------CcceeeEEecccccccccEEECCCC
Confidence 999999999999999999999999875432 33233 4999999999998 9999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++.+++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.+.++++
T Consensus 140 ~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~ 217 (343)
T cd08235 140 VSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDA 217 (343)
T ss_pred CCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecC
Confidence 999999876 68889999874 4589999999999889999999999999999339999999999999999999999988
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeec
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
++ .++.+.+++...++++|++||++++...+..++++++++ |+++.++.... ....++...+..+++++.++...
T Consensus 218 ~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 218 AE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred Cc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence 77 678888888888778999999999766889999999997 99999986543 23455556666688888765422
Q ss_pred cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
....+..++++++++.+++.+.+...++++++.++++.+.+++..|+|++
T Consensus 294 ---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 294 ---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred ---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 23567889999999998765556778999999999999988774488874
No 58
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.9e-41 Score=322.46 Aligned_cols=341 Identities=26% Similarity=0.355 Sum_probs=280.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
||++++.+++ .++++++|+|++ .++||+||+.++++|++|++ +.|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 5889998886 699999999986 79999999999999999999 877665 3468899999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCccccccccccc----ccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcC
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIAL----NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVD 160 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp 160 (375)
|+|+..+..+|+.|.+|+.+....|.+..... +|+.. ...-.|+|++|+.++.+ .++++|
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD--------------MGPYGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc--------------cCCCCCeeeeEEEeecccCcEEECC
Confidence 99999999999999999999999997632110 01100 00002589999999976 899999
Q ss_pred CCCCcc---cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201 161 PSIDPS---DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237 (375)
Q Consensus 161 ~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~ 237 (375)
++++++ +++.++.++.|||+++ ..+++++|++|||+|+|++|++++|+|++.|+.+|++++++++|.++++++|+.
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 223 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence 999998 5677888899999987 788999999999998899999999999999976798999999999999999984
Q ss_pred EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh-----------hHHHHHHhcccCCeEEEEEccCCC--------
Q 017201 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS-----------LLSEALETTKVGKGKVIVIGVGVD-------- 298 (375)
Q Consensus 238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~-------- 298 (375)
.++..+ .++.+.+.++++ .++|++||++|+.. .+..++++++++ |+++.+|....
T Consensus 224 -~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~ 297 (375)
T cd08282 224 -PIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDA 297 (375)
T ss_pred -EeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccc
Confidence 566655 577788888777 48999999998762 488999999997 99988876432
Q ss_pred ----ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374 (375)
Q Consensus 299 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~ 374 (375)
....++...++.++..+.+.... ....+..+++++.++++++..++.+.+++++++++++.+.+++..|+|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~ 374 (375)
T cd08282 298 AAKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIK 374 (375)
T ss_pred cccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeC
Confidence 12345666666677777665421 24568889999999999876568899999999999999988775599986
Q ss_pred C
Q 017201 375 I 375 (375)
Q Consensus 375 ~ 375 (375)
+
T Consensus 375 ~ 375 (375)
T cd08282 375 P 375 (375)
T ss_pred C
Confidence 3
No 59
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-41 Score=318.17 Aligned_cols=333 Identities=28% Similarity=0.436 Sum_probs=276.5
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CC--CCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 11 AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FP--APLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 11 a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|+++.++. .+++++.+.|++.++||+|++.++++|+.|++ +.+. .. ...+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 46777775 69999999999999999999999999999998 6432 11 12457789999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|++.+..+|+.|++|+.|.+.+|++.... +.. ...|+|++|++++++.++++|++++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~g~~~~~~~v~~~~~~~lP~~~~~~ 140 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATP-----------------PVDGTLCRYVNHPADFCHKLPDNVSLE 140 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccc-----------------cCCCceeeeEEecHHHcEECcCCCCHH
Confidence 9999999999999999999999999864221 100 012499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
+++.+ .++++|++++ +.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|++.+++.++
T Consensus 141 ~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~-- 216 (343)
T cd05285 141 EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT-- 216 (343)
T ss_pred Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--
Confidence 99877 4788899876 7889999999999988999999999999999944999999999999999999999998776
Q ss_pred cccH---HHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 247 NKSI---SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 247 ~~~~---~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
.++ .+.+.+.+.++++|++||++|+...++.++++++++ |+++.+|.... ...+++..+..+++++.++..
T Consensus 217 -~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~--- 290 (343)
T cd05285 217 -EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP-EVTLPLSAASLREIDIRGVFR--- 290 (343)
T ss_pred -ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CCccCHHHHhhCCcEEEEecc---
Confidence 443 677777777778999999999866789999999997 99999986653 344555556667888776542
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEe
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLIT 374 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~ 374 (375)
....+..+++++.++.+.+.+.+.+.++++++.+|++.+.+++ .+|++|.
T Consensus 291 -~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 291 -YANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred -ChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 2356888999999998775555778899999999999998774 3799874
No 60
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.1e-41 Score=317.59 Aligned_cols=324 Identities=23% Similarity=0.362 Sum_probs=264.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-----------CCCCCcccCcceeEEEEEe
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-----------APLYPRVLGHEGVGVVESA 76 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-----------~~~~p~i~G~e~~G~Vv~v 76 (375)
|||+++..+ .+++++++.|+++++||+|++.++++|++|++ +.|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999866 69999999999999999999999999999998 766321 2335788999999999999
Q ss_pred CCCCCC-CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201 77 GDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY 155 (375)
Q Consensus 77 G~~v~~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 155 (375)
|+++++ +++||+|+..+..+|+.|++|..|... .. .|+|++|+.++.+.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------------~~------------------~g~~~~~~~v~~~~ 128 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------------EA------------------PGGYAEYMLLSEAL 128 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------------CC------------------CCceeeeEEechHH
Confidence 999987 999999999999999999999432110 01 24999999999999
Q ss_pred EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201 156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235 (375)
Q Consensus 156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 235 (375)
++++|+++++++++ ++.++++||++ ...+++++|++|||+|+|++|.+++|+|+.+|+..++++++++++.++++++|
T Consensus 129 ~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g 206 (341)
T cd08262 129 LLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMG 206 (341)
T ss_pred eEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcC
Confidence 99999999999887 56688899987 47889999999999988999999999999999966888888999999999999
Q ss_pred CcEEeCCCCCCcccHHH---HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCC
Q 017201 236 MTDFINPDDEPNKSISE---LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG 312 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~---~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 312 (375)
++.++++++ .+..+ .+.....+.++|++||++|+...+..++++++++ |+++.+|.... ...+.+.....++
T Consensus 207 ~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~ 281 (341)
T cd08262 207 ADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCME-SDNIEPALAIRKE 281 (341)
T ss_pred CcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC-CCccCHHHHhhcc
Confidence 988888765 32211 3445555668999999998854778899999997 99999986642 2223333334477
Q ss_pred ceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 313 RTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+++.++... ..+.+.++++++.++.+++.+++.+.+++++++++++.+.+++. .|+|++
T Consensus 282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 282 LTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred eEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 777755321 23468889999999999876667889999999999999988776 598874
No 61
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.2e-40 Score=317.09 Aligned_cols=338 Identities=24% Similarity=0.396 Sum_probs=271.0
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
+++++++.+++ .+++++.+.|++.++||+||+.++++|++|++ +.+... ...+|.++|||++|+|+++|++++.+
T Consensus 17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (364)
T PLN02702 17 ENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL 95 (364)
T ss_pred ccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence 46666666665 59999999998999999999999999999999 765321 12357789999999999999999999
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
++||+|++.+..+|+.|++|++|.++.|+...+ ++... ..|+|++|+.++.+.++++|+++
T Consensus 96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~--~~~~~-----------------~~g~~~~y~~v~~~~~~~~P~~l 156 (364)
T PLN02702 96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF--FATPP-----------------VHGSLANQVVHPADLCFKLPENV 156 (364)
T ss_pred CCCCEEEEcCCCCCCCCcchhCcCcccCCCccc--cCCCC-----------------CCCcccceEEcchHHeEECCCCC
Confidence 999999999999999999999999999986321 11110 12499999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
++.++++.. .+.++++++ ...++.+|++|||+|+|++|++++++|+..|+..|+++++++++.++++++|++.+++..
T Consensus 157 ~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 234 (364)
T PLN02702 157 SLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVS 234 (364)
T ss_pred CHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecC
Confidence 999887632 445577765 678899999999998899999999999999996688888899999999999998876543
Q ss_pred CCCcccHHHHHHhh--cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 244 DEPNKSISELVKGI--THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 244 ~~~~~~~~~~i~~~--~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
. ...++.+.+.++ ..+.++|++||++|+...+..++++++++ |+++.+|.... ...++...+..+++++.+++.
T Consensus 235 ~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~- 310 (364)
T PLN02702 235 T-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFR- 310 (364)
T ss_pred c-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-CCcccHHHHHhCccEEEEecc-
Confidence 2 114566666554 23447999999999766899999999997 99999986542 334455566678899888652
Q ss_pred cccCCCCHHHHHHHHHcCCCCCCcceeeEeec--ccHHHHHHHHcCCCe-eEEEEe
Q 017201 322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL--EEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
....+..++++++++++++.+++++.|++ +++++|++.+.+++. .|+|+.
T Consensus 311 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 ---YRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred ---ChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 23467889999999998765667788666 799999999887765 599885
No 62
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=9.8e-41 Score=314.59 Aligned_cols=331 Identities=28% Similarity=0.426 Sum_probs=275.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++...++++.|.|++.++||+|||.++++|++|++ +.|..+. ..|.++|||++|+|+++|+++..+++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 7899999888655589999999999999999999999999999 7776542 3467899999999999999999999999
Q ss_pred EEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 88 IVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 88 ~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
+|++.+ ..+|+.|..|..+..++|..... .|+..+| +|++|+.++.+.++++|+++++.
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------------~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYTVDG------------------GMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc--cCccccC------------------cceeEEEEchHHeEeCCCCCCHH
Confidence 999755 57899999999999999987543 2333343 99999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
+++.++..+.|||+++ ..+++++|++|||+|+|++|++++++|+.. |+ +|+++++++++.+.++++|++.+++.++
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999987 778999999999999999999999999984 98 8999999999999999999999888753
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
..++.+.+++..+ ++|+++++.++...+..++++++++ |+++.+|... ...+++...+..+.+++.++... .
T Consensus 217 -~~~~~~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 288 (338)
T PRK09422 217 -VEDVAKIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ESMDLSIPRLVLDGIEVVGSLVG---T 288 (338)
T ss_pred -cccHHHHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC-CCceecHHHHhhcCcEEEEecCC---C
Confidence 1356667777665 6896555555556899999999997 9999998664 24445555566678888775422 2
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.+.++.+++++.++++++ .+. .++++++++|++.+.+++. .|+++.
T Consensus 289 ~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 289 RQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred HHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 356788999999998864 344 6899999999999988777 488875
No 63
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1e-40 Score=314.20 Aligned_cols=334 Identities=30% Similarity=0.453 Sum_probs=285.9
Q ss_pred eeEEEEecCCCC-eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 9 CKAVVCWGLGEP-LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 9 ~~a~~~~~~~~~-l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
|||+++..++++ +.+++.+.|.+++++|+|++.++++|+.|+. ..|..+ ...+|.++|+|++|+|+.+|+++..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 789999999987 6778888889999999999999999999999 877665 2456788999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|+..+..+|+.|+.|..++...|...... |...+ |+|++|+.++.+.++++|+++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~ 140 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLGID------------------GGFAEYIVVPARALVPVPDGVPF 140 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccccC------------------CcceeeEEechHHeEECCCCCCH
Confidence 99999999999999999999999999654332 33333 39999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
.+++.++.++.|||+++....+++++++|||.|+|++|++++++|+..|+ +|+++++++++.+.++++|++.+++..+
T Consensus 141 ~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~- 218 (338)
T cd08254 141 AQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD- 218 (338)
T ss_pred HHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC-
Confidence 99999999999999988777889999999998889999999999999998 8999999999999999999988887765
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
....+.+ ....+.++|+++|++|....+..++++++++ |+++.+|... ....++...+..++.++.++... .
T Consensus 219 --~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (338)
T cd08254 219 --DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGG---T 290 (338)
T ss_pred --cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC-CCCccCHHHHhhCccEEEEeccC---C
Confidence 4555555 5556668999999998777889999999998 9999998764 34455666677788888876422 2
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
...+..++++++++.+++. .+.+++++++++++.+.+++. .|+|+++
T Consensus 291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 4568889999999998854 568999999999999988776 5998874
No 64
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-41 Score=315.98 Aligned_cols=329 Identities=32% Similarity=0.454 Sum_probs=276.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.++++++++++.|.|.++++|++||+.++++|++|++ ..|..+...+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 7899999999889999999999999999999999999999999 888766556688999999999999999998899999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|++.+..+|+.|++|..+.++.|..... +|...+ |+|++|+.++.+.++++|+++++.+
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~ 140 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEELD------------------GFFAEYAKVKVTSLVKVPPNVSDEG 140 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc--cccccC------------------ceeeeeeecchhceEECCCCCCHHH
Confidence 99999889999999999999999987543 232223 3999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
++.+++.+.+||+++... .++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++ ++.+++.+
T Consensus 141 ~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~--- 214 (334)
T PRK13771 141 AVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS--- 214 (334)
T ss_pred hhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch---
Confidence 999999999999987554 8999999999998 9999999999999999 899999999999999888 76666543
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-cccchHHHhhcCCceEEEEeeccccC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
++.+.++++ + ++|++||++|+. .+..++++++++ |+++.+|..... ...++....+.+++++.+... ..
T Consensus 215 --~~~~~v~~~--~-~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 284 (334)
T PRK13771 215 --KFSEEVKKI--G-GADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---AT 284 (334)
T ss_pred --hHHHHHHhc--C-CCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CC
Confidence 245555554 3 699999999986 788999999997 999999976431 212333333457888887632 23
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
+++++.++++++++.+++ .+.+.++++++++|++.+.+++. .|+|+.+
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 456888999999999873 47789999999999999987665 5888763
No 65
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.7e-40 Score=313.33 Aligned_cols=335 Identities=30% Similarity=0.473 Sum_probs=286.1
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
|||+++..++ ..+++++++.|.+.++|++||+.++++|++|++ +.+.++. ...|.++|||++|+|+++|+++..+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998776 459999999999999999999999999999998 7776543 345678999999999999999999999
Q ss_pred CCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 86 GDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 86 Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
||+|+..+ ..+|+.|++|..+...+|...... |+... |+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~s~~~~~~~~~~~lp~~~~ 140 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVD------------------GTFAEYAIADARYVTPIPDGLS 140 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccccC------------------CcceeEEEeccccEEECCCCCC
Confidence 99999776 688999999999999999875432 33333 4899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++.+
T Consensus 141 ~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 218 (341)
T cd08297 141 FEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFK 218 (341)
T ss_pred HHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCC
Confidence 99999999999999998755 58999999999988 7799999999999999 999999999999999999999999887
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
+ .++...+.++++++++|++||+.++...+..++++++++ |+++.+|.......+++...+..+++++.+....
T Consensus 219 ~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (341)
T cd08297 219 K---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG-- 292 (341)
T ss_pred C---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC--
Confidence 6 578888888887779999999887766889999999997 9999998765333466666666788988875422
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..+.++.++++++++++++ .+ ..|++++++++++.+.+++. .|+|+++
T Consensus 293 -~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 -TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred -CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1356888999999999874 23 57999999999999988776 5999875
No 66
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.4e-41 Score=316.11 Aligned_cols=317 Identities=23% Similarity=0.264 Sum_probs=254.6
Q ss_pred CCCCccceeeEEEEec-CCC-----CeEEEE---eecC-CCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCc--
Q 017201 1 MSNSQAITCKAVVCWG-LGE-----PLKVEE---IQVE-PPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGH-- 67 (375)
Q Consensus 1 m~~~~~~~~~a~~~~~-~~~-----~l~~~~---~~~p-~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~-- 67 (375)
|-+.+..++|.+++.. +.. .|++++ ++.| ++++|||+|||.++++||.|.. ..+.......|.++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~ 80 (348)
T PLN03154 1 MMEGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRI 80 (348)
T ss_pred CCCCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCee
Confidence 3344566788888843 321 277776 3666 3479999999999999999887 4432222235889998
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceee
Q 017201 68 EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSE 147 (375)
Q Consensus 68 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~ 147 (375)
|++|+|..+|++++.+++||+|+.. |+|+|
T Consensus 81 ~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~~~ae 110 (348)
T PLN03154 81 EGFGVSKVVDSDDPNFKPGDLISGI--------------------------------------------------TGWEE 110 (348)
T ss_pred EeeEEEEEEecCCCCCCCCCEEEec--------------------------------------------------CCcEE
Confidence 8899999999999999999999721 28999
Q ss_pred eEEeeccc--EEE--cCCCCCcc-cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Q 017201 148 YMVIDANY--VVK--VDPSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI 221 (375)
Q Consensus 148 ~~~v~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~ 221 (375)
|+.++.+. +.+ +|++++++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++
T Consensus 111 y~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~ 189 (348)
T PLN03154 111 YSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGS 189 (348)
T ss_pred EEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEE
Confidence 99998753 544 59999986 688899999999999877889999999999998 9999999999999999 89999
Q ss_pred cCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc
Q 017201 222 DKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300 (375)
Q Consensus 222 ~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~ 300 (375)
++++++.++++ ++|++.++++.+ ..++.+.+++.+++ ++|++||++|+. .+..++++++++ |+++.+|...+..
T Consensus 190 ~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~~ 264 (348)
T PLN03154 190 AGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLNS 264 (348)
T ss_pred cCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccCC
Confidence 99999999987 799999998864 13677778777764 899999999986 889999999998 9999999765322
Q ss_pred c-----cchHHHhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEE
Q 017201 301 V-----PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVL 372 (375)
Q Consensus 301 ~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvv 372 (375)
. .++...++.+++++.|+....+. ..+.++++++++++|++++ .+..+|+|+++++|++.+.+++. +|+|
T Consensus 265 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvV 342 (348)
T PLN03154 265 LSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQV 342 (348)
T ss_pred CCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEE
Confidence 1 13555677789999987644321 1235677999999999985 36778999999999999998887 5999
Q ss_pred EeC
Q 017201 373 ITI 375 (375)
Q Consensus 373 i~~ 375 (375)
|++
T Consensus 343 l~~ 345 (348)
T PLN03154 343 IRV 345 (348)
T ss_pred EEe
Confidence 874
No 67
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1e-41 Score=312.88 Aligned_cols=270 Identities=24% Similarity=0.340 Sum_probs=226.6
Q ss_pred ccCcceeEEEEEeCCCCC------CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCccee
Q 017201 64 VLGHEGVGVVESAGDEVK------EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137 (375)
Q Consensus 64 i~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 137 (375)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.|+++.|++.... |+...+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence 589999999999999999 899999999999999999999999999999986542 3321100
Q ss_pred cccccCceeeeEEeecc-cEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Q 017201 138 HIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA 216 (375)
Q Consensus 138 ~~~~~g~~a~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~ 216 (375)
.....|+|+||+.++++ .++++|+++++++++++++.+.|||+++. .....+|++|||+|+|++|++++|+||++|++
T Consensus 68 ~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~ 146 (280)
T TIGR03366 68 GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAA 146 (280)
T ss_pred CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00112499999999997 79999999999999999999999999764 45667999999999999999999999999995
Q ss_pred eEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201 217 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 217 ~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
+|++++++++|+++++++|++.+++..+ ..+.+++++.+.++|++||++|++..++.++++++++ |+++.+|..
T Consensus 147 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 220 (280)
T TIGR03366 147 RVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220 (280)
T ss_pred EEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence 5999999999999999999999887643 3455666777778999999999887899999999998 999999975
Q ss_pred CC-ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcC--CCCCCcceeeEeecccH
Q 017201 297 VD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEI 356 (375)
Q Consensus 297 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 356 (375)
.. ...++++..++.|++++.++... ..++++++++++.++ ++++.++++++||++++
T Consensus 221 ~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 221 FPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 42 45677888888899999997532 235789999999974 67777889999999874
No 68
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.5e-40 Score=311.48 Aligned_cols=336 Identities=29% Similarity=0.435 Sum_probs=279.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++++.+ .+.+++.++|+++++||+||+.++++|++|+. ..+.. ....|.++|+|++|+|+.+|+++..+++||
T Consensus 1 ~~a~~~~~~~-~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPG-DLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCC-ceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 6899999886 49999999999999999999999999999998 77755 234578899999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|+..+...|+.|++|..++.+.|+.... .|.... |+|++|+.++++.++++|+++++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSRRD------------------GAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce--EecccC------------------CcccceEEechHHeEECcCCCCHHH
Confidence 99999999999999999999999987532 233333 4999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++++ ..+.+||+++. .+.+++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.++++++|++.+++.++
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--- 213 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--- 213 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---
Confidence 9887 57889999875 788999999999988999999999999999944999999999999999999988988876
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-c-ccchHHHhhcCCceEEEEeecccc-
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-M-VPLNVIALACGGRTLKGTTFGGIK- 324 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~- 324 (375)
.. .+.+++..+++++|++||++|+...+..++++++++ |+++.+|..... . ...++..++.++.++.+.......
T Consensus 214 ~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd08236 214 ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP 291 (343)
T ss_pred cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc
Confidence 45 667777777778999999998766889999999997 999999866431 1 222333445688888887643211
Q ss_pred -CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC-CCe-eEEEE
Q 017201 325 -TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ-PDC-VKVLI 373 (375)
Q Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~-~kvvi 373 (375)
..+.++++++++.++++.+.+++...++++++.++++.+.+ +.. .|+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 292 FPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13467788899999998654456788999999999999987 444 48764
No 69
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.7e-40 Score=311.02 Aligned_cols=310 Identities=22% Similarity=0.283 Sum_probs=264.1
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 9 CKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 9 ~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|++ +.|.++ .+.+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887653 7889999999999999999999999999999 877664 34568899999999999999999999
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
++||+|++.+. .|+|++|+.++...++++|+++
T Consensus 81 ~~Gd~V~~~~~-----------------------------------------------~g~~~~~~~~~~~~~~~ip~~~ 113 (324)
T cd08292 81 QVGQRVAVAPV-----------------------------------------------HGTWAEYFVAPADGLVPLPDGI 113 (324)
T ss_pred CCCCEEEeccC-----------------------------------------------CCcceeEEEEchHHeEECCCCC
Confidence 99999985431 1389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
++++++.+++.+.+||+++ ..+++++|++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++|++.+++.
T Consensus 114 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (324)
T cd08292 114 SDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVST 191 (324)
T ss_pred CHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 9999999998889999876 5688999999999987 9999999999999999 89999888888888888999888888
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
.+ .++.+.++++++++++|++||++|+. ....++++++++ |+++.+|........+++..+..+++++.++....
T Consensus 192 ~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08292 192 EQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR 266 (324)
T ss_pred CC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence 76 67888899999888999999999986 778999999997 99999987543344566666666899999887543
Q ss_pred ccC-------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 323 IKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 323 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+.. ...+..+++++.++.+++. +.+.|+++++.+|++.+.++.. .|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 267 WSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 211 2356778999999999854 4678999999999999877655 588863
No 70
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.7e-40 Score=309.82 Aligned_cols=336 Identities=29% Similarity=0.432 Sum_probs=274.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||++++.++..+++.+.+.|+|+++|++||+.++++|+.|++ +.+.. ....+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999998 55432 1233567899999999999999998999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+..+|+.|.+|..+++++|....+ .|.... |+|++|++++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~v~v~~~~~~~lP~~~~ 140 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI--LGVDTD------------------GCFAEYVVVPEENLWKNDKDIP 140 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce--EeccCC------------------CcceEEEEechHHcEECcCCCC
Confidence 99999999999999999999999999976321 232222 4899999999999999999998
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
++.+ +++..+.++++++. ...++|++|||+|+|++|++++|+|+..|+++|++++++++|.++++++|++.+++.++
T Consensus 141 ~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 217 (341)
T cd05281 141 PEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE 217 (341)
T ss_pred HHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc
Confidence 8554 55557788887654 45689999999988999999999999999866888888899999999999998888765
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH-HhhcCCceEEEEeeccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGTTFGGI 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 323 (375)
.++. .++++.+++++|++||++|+......++++++++ |+++.+|.... ...+++. .+..+++.+.+....
T Consensus 218 ---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 218 ---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred ---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CcccccchhhhccceEEEEEecC--
Confidence 5677 7888888779999999998876789999999998 99999986643 2233322 245577777765421
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
.....+..+++++.++.+++.+++.+.+++++++++++.+.+++.+|+|++.
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 1234577889999999988666677889999999999999887755998863
No 71
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=6.6e-40 Score=307.83 Aligned_cols=329 Identities=32% Similarity=0.482 Sum_probs=274.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++..+++++.++++|.|++.+++|+|++.++++|++|++ +.|..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 6899998766679999999999999999999999999999999 888766556788999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|++.+...|+.|++|+.+.+++|..... .|...+ |+|++|+.++.+.++++|+++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~ 140 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAE--YGEEVD------------------GGFAEYVKVPERSLVKLPDNVSDES 140 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccc--cccccC------------------CeeeeEEEechhheEECCCCCCHHH
Confidence 99999989999999999999999986421 232222 4999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
++.+++++.+||+++.. +++++++++||+|+ |++|++++++++..|+ +|+++++++++.+.+++++.+.+++..
T Consensus 141 ~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--- 215 (332)
T cd08259 141 AALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS--- 215 (332)
T ss_pred HhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH---
Confidence 99999999999998766 88999999999998 9999999999999999 899999999999989889987777542
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
++.+.+.+.. ++|++++++|.. ....+++++++. |+++.++........++......++.++.++.. ...
T Consensus 216 --~~~~~~~~~~---~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 285 (332)
T cd08259 216 --KFSEDVKKLG---GADVVIELVGSP-TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS---ATK 285 (332)
T ss_pred --HHHHHHHhcc---CCCEEEECCChH-HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC---CCH
Confidence 2555555543 699999999987 678999999997 999999866432222333334347777766531 123
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
..+..+++++.++.+++ ++++.++++++++|++.+.+++. .|+|++
T Consensus 286 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 286 ADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 46788999999998874 46789999999999999988776 488864
No 72
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=7.7e-40 Score=308.83 Aligned_cols=332 Identities=28% Similarity=0.397 Sum_probs=274.5
Q ss_pred EecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201 14 CWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV 89 (375)
Q Consensus 14 ~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V 89 (375)
-+.++.++++++.|.|+|+++||+||+.++++|++|+. +.+.. ....+|.++|+|++|+|+++|++++.+++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 35678889999999999999999999999999999998 65542 112357789999999999999999999999999
Q ss_pred EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc
Q 017201 90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS 169 (375)
Q Consensus 90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa 169 (375)
+..+...|+.|..|..+....|++.+. +|+... |+|++|++++++.++++|++++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~a- 142 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI--FGVDTD------------------GCFAEYAVVPAQNIWKNPKSIPPEYA- 142 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce--EeecCC------------------CcceeEEEeehHHcEECcCCCChHhh-
Confidence 999999999999999999999999643 233223 49999999999999999999998655
Q ss_pred ccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCccc
Q 017201 170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS 249 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~ 249 (375)
+++..+.+|++++ ....++|++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++..+ .+
T Consensus 143 ~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~ 217 (340)
T TIGR00692 143 TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---ED 217 (340)
T ss_pred hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---cC
Confidence 5667888888875 345789999999888999999999999999844888888899999999999988888776 67
Q ss_pred HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH-HhhcCCceEEEEeeccccCCCC
Q 017201 250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGTTFGGIKTKSD 328 (375)
Q Consensus 250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 328 (375)
+.+.+.++.+++++|++||++|+...+..++++++++ |+++.+|.... ...++.. .+..+++++.+... ....+.
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 293 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITG--RHMFET 293 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC-CcccchhhhhhhcceEEEEEec--CCchhh
Confidence 8888888887778999999998776889999999997 99999987642 2233333 45557777776541 112345
Q ss_pred HHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201 329 LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375 (375)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 375 (375)
+.+++++++++++++.+++.+.+++++++++++.+.+++.+|+|+++
T Consensus 294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 67889999999998655578899999999999999877667999874
No 73
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.7e-39 Score=306.27 Aligned_cols=331 Identities=27% Similarity=0.403 Sum_probs=267.1
Q ss_pred EEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-cc-CCCC--CCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201 13 VCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CS-EGFP--APLYPRVLGHEGVGVVESAGDEVKEVKEGDI 88 (375)
Q Consensus 13 ~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~-g~~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~ 88 (375)
++++.+ .+++++.++|+++++||+||+.++++|++|++ +. +..+ ...+|.++|+|++|+|+++|++++.+++||+
T Consensus 2 ~~~~~~-~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAG-DLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCC-ceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 456665 59999999999999999999999999999998 63 3321 1245788999999999999999999999999
Q ss_pred EEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 89 VIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 89 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
|+..+..+|+.|++|..|+++.|.+.... +.. .+ ....|+|++|+.++.+.++++|++++.++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL--GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccce--eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 99999999999999999999999874321 110 00 00124999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
|+. ..++++||+++...... +|++|||.|+|.+|++++|+|+++|+++|+++++++++.++++++|++.+++.++
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--- 219 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--- 219 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc---
Confidence 876 56888999887655555 9999999988999999999999999867999998899999999999999988765
Q ss_pred ccHHHHHHhhc-CCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201 248 KSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 248 ~~~~~~i~~~~-~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
.++ .++. ...++|++||+.++...++.++++|+++ |+++.+|... .....++..++.+++++.+... ..
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~----~~ 289 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG-GPVPLPLNALVAKELDLRGSFR----FD 289 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC-CCccCcHHHHhhcceEEEEEec----CH
Confidence 332 2222 2336999999999766789999999997 9999998554 3344455555557888877542 23
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..+.++++++.++.+++.+.+.+++++++++++++.+.+++. .|+|++.
T Consensus 290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 568889999999999876667889999999999999987665 6999864
No 74
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-39 Score=306.56 Aligned_cols=336 Identities=26% Similarity=0.387 Sum_probs=281.1
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++...+. .+++++.+.|++.+++|+|++.++++|++|++ +.|..+. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68999884432 37788888888899999999999999999999 7775432 34578899999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|++.+..+|+.|++|.++.++.|+.... .|.... |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~------------------g~~~~~~~~~~~~~~~~p~~~~ 140 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEHVD------------------GGYAEYVAVPARNLLPIPDNLS 140 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccccC------------------cceeEEEEechHHceeCCCCCC
Confidence 99999999999999999999999999987432 233333 3899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.+++++.+|++++.+..++.++++++|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.+++..
T Consensus 141 ~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (342)
T cd08266 141 FEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYR 219 (342)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecC
Confidence 99999999999999998878889999999999988 7999999999999999 899999999999988888887777765
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
+ .++.+.+.+...+.++|++++++|.. .+..++++++++ |+++.++........++....+.+++++.+....
T Consensus 220 ~---~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (342)
T cd08266 220 K---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG-- 292 (342)
T ss_pred C---hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC--
Confidence 5 56777777777666899999999986 788999999997 9999998665433345554445588888876533
Q ss_pred cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
....+..++++++++.+++ ++++.|++++++++++.+.+++. .|+++++
T Consensus 293 -~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 293 -TKAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred -CHHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 2346778889999998874 47789999999999999987765 5998864
No 75
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.3e-39 Score=304.73 Aligned_cols=331 Identities=28% Similarity=0.429 Sum_probs=277.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD 87 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd 87 (375)
|||+++.+++ .+++++.+.|++.++||+||+.++++|++|++ ..|..+. .+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPG-ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCC-ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 6899998887 59999999999999999999999999999999 8776543 3788999999999999999999999999
Q ss_pred EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
+|+..+...|+.|.+|..++.+.|..... .|...+ |+|++|+.++.+.++++|+++++.+
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRN------------------GGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce--eccCCC------------------CcceeEEEecHHHcEECcCCCCHHH
Confidence 99999999999999999999999977531 122223 3999999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++.+ ..+.++++++ +.+++++|++|||+|+|.+|++++++|+..|+++|+++++++++.+.++++|++.+++..+
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--- 213 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--- 213 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---
Confidence 8876 6788898887 7889999999999988999999999999999944899999999999999999988887765
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTK 326 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (375)
.++... +.+.+.++|++||++++...+..++++++++ |+++.+|.... ....++...+..+++++.+... ..
T Consensus 214 ~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 286 (334)
T cd08234 214 EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI----NP 286 (334)
T ss_pred CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc----CH
Confidence 444444 3445558999999998766889999999998 99999986643 2345555555557788877642 23
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201 327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi 373 (375)
..++.++++++++++++.+++..++++++++++++.+.+....|+|+
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence 46788999999999987666678899999999999998833358886
No 76
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=7.7e-40 Score=306.84 Aligned_cols=320 Identities=30% Similarity=0.397 Sum_probs=263.3
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++..++ +.+++++.+.|+++++||+||+.++++|++|++ +.+ .....+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899987665 468888888888999999999999999999998 664 2222457789999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|+..+..+|+.|++|+.|..++|+.... +|+..+ |+|++|++++.+.++++|++++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVVSN------------------GGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce--eeccCC------------------CceeeEEEcCHHHceeCCCCCCHH
Confidence 999999999999999999999999987543 233333 499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
+++.+++++.+||+++. .+++++|++|+|+|+ |++|++++++|++.|+ +|+++++ .+.++++|++.+++.++
T Consensus 140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~- 212 (325)
T cd08264 140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE- 212 (325)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH-
Confidence 99999999999999875 489999999999998 9999999999999999 7888763 36678899988887643
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
..+.+++++ .++|+|+|++|+. .+..++++++++ |+++.+|........++...+..++.++.++..+ .
T Consensus 213 ----~~~~l~~~~--~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 281 (325)
T cd08264 213 ----VEEKVKEIT--KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG---T 281 (325)
T ss_pred ----HHHHHHHHh--CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC---C
Confidence 345566666 4899999999985 889999999998 9999998653234566666776677888776433 2
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EE
Q 017201 326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV 371 (375)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kv 371 (375)
++.+.++++++...+ + .+.+.|+++++++|++.+.+++.. |+
T Consensus 282 ~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 356788888885333 2 256789999999999998876653 53
No 77
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.3e-39 Score=281.37 Aligned_cols=308 Identities=26% Similarity=0.329 Sum_probs=258.5
Q ss_pred CccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCC
Q 017201 4 SQAITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 4 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~ 78 (375)
.++...||++|.+.+.| ++++..++|....++|+||.+|+.|||+|+. ++|.+|. +.+|.+-|.|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 34567899999988876 8889999998877789999999999999999 9999986 78999999999999999999
Q ss_pred CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201 79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK 158 (375)
Q Consensus 79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 158 (375)
++++|++||+|+.... +.|+|++|...+++.+++
T Consensus 95 ~vkgfk~Gd~VIp~~a----------------------------------------------~lGtW~t~~v~~e~~Li~ 128 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLSA----------------------------------------------NLGTWRTEAVFSESDLIK 128 (354)
T ss_pred CcCccCCCCeEeecCC----------------------------------------------CCccceeeEeecccceEE
Confidence 9999999999984432 236999999999999999
Q ss_pred cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhh
Q 017201 159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKA 233 (375)
Q Consensus 159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~ 233 (375)
+++.++++.||++..+.+|||++|.+.-++++||+|.-.|+ +.+|++.+|+||++|+ +.+-+.++....+. ++.
T Consensus 129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKS 207 (354)
T ss_pred cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHH
Confidence 99999999999999999999999989999999999999999 9999999999999999 77777777655544 467
Q ss_pred cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201 234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR 313 (375)
Q Consensus 234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 313 (375)
+||++|+...+... .+..+......++.+.|||+|+.. -....+.|.++ |..+.+|..+.++.+++...+++|++
T Consensus 208 lGA~~ViTeeel~~---~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl 282 (354)
T KOG0025|consen 208 LGATEVITEEELRD---RKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDL 282 (354)
T ss_pred cCCceEecHHHhcc---hhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCCCcccccchheeccc
Confidence 99999996654111 112222234457999999999984 46778899997 99999997777888999999999999
Q ss_pred eEEEEeeccccCCC--------CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201 314 TLKGTTFGGIKTKS--------DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365 (375)
Q Consensus 314 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 365 (375)
.++|.++..|...+ .+.++.++++.|+|... -.+..||++...|++...+
T Consensus 283 ~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~ 340 (354)
T KOG0025|consen 283 KLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALS 340 (354)
T ss_pred eeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHH
Confidence 99999988774433 24568888999999854 3467899998888886644
No 78
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-39 Score=306.41 Aligned_cols=324 Identities=24% Similarity=0.329 Sum_probs=262.3
Q ss_pred eeEEEEecCCCC--eEEEE-eecCCCCCCeEEEEEeeeecCCCccc-ccCCCC--------------------CCCCCcc
Q 017201 9 CKAVVCWGLGEP--LKVEE-IQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP--------------------APLYPRV 64 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~--------------------~~~~p~i 64 (375)
|||+++..++.+ +.+.+ .+.|++.+++|+|||.++++|++|++ +.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876643 55543 57778899999999999999999998 766542 2356889
Q ss_pred cCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCc
Q 017201 65 LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCST 144 (375)
Q Consensus 65 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~ 144 (375)
+|||++|+|+++|++++.+++||+|++.+...|+.|+.|.. |. . +|...+ |+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~--~~~~~~------------------g~ 132 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y--IGSERD------------------GG 132 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c--cCCCCC------------------cc
Confidence 99999999999999999999999999988888888766421 11 0 122122 39
Q ss_pred eeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201 145 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK 223 (375)
Q Consensus 145 ~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~ 223 (375)
|++|+.++.+.++++|+++++.+++++++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|+++++
T Consensus 133 ~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~ 210 (350)
T cd08274 133 FAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAG 210 (350)
T ss_pred ceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeC
Confidence 99999999999999999999999999999999999976 7789999999999998 9999999999999999 7888886
Q ss_pred ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccc
Q 017201 224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303 (375)
Q Consensus 224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~ 303 (375)
++ +.+.++++|++.+++... ....+ ...+.+.++|++||++|+. .+..++++++++ |+++.+|........+
T Consensus 211 ~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 282 (350)
T cd08274 211 AA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGAIAGPVVEL 282 (350)
T ss_pred ch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecccCCccccC
Confidence 65 888889999976665543 33333 4556666899999999986 789999999998 9999998654223567
Q ss_pred hHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
+...++.+++++.++... ....+.++++++.++++++ ++.+.+++++++++++.+.+++. .|+|+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 283 DLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 777767789999887643 2356888999999999874 46788999999999999987766 5988864
No 79
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=5.2e-39 Score=301.71 Aligned_cols=322 Identities=28% Similarity=0.414 Sum_probs=268.8
Q ss_pred eeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 9 CKAVVCWGLGE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 9 ~~a~~~~~~~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
|||+++.+++. ++++++.+.|.+.++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999988873 68888888888999999999999999999999 88876655678899999999999999999999
Q ss_pred CCCCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 84 KEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 84 ~~Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
++||+|++.+ ..+|+.|.+|.++.+++|...... |+..+ |+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lp~~ 140 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYTVD------------------GGYAEYMVADERFAYPIPED 140 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccccC------------------CceEEEEEecchhEEECCCC
Confidence 9999998755 478999999999999999876542 43333 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+++.+++.+++++.|||+++ ..++++++++|||+|+|++|++++++|++.|+ +|+++++++++.+.++++|++.+++.
T Consensus 141 ~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 218 (329)
T cd08298 141 YDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDS 218 (329)
T ss_pred CCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEecc
Confidence 99999999999999999987 88999999999999999999999999999998 99999999999999999999887776
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
.. . .++++|+++++.+....++.++++++++ |+++.+|........++... ..++..+.++...
T Consensus 219 ~~---~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~- 282 (329)
T cd08298 219 DD---L----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL- 282 (329)
T ss_pred Cc---c----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCCCCCccchhh-hhCceEEEEecCC-
Confidence 54 1 2347999999877666899999999998 99999885432222333333 3366677665422
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
....+..++++++++.+++ ..+.|+++++++|++.+.+++. .|+|+
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2345788899999998875 2578999999999999988776 47764
No 80
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.9e-39 Score=305.93 Aligned_cols=312 Identities=22% Similarity=0.216 Sum_probs=250.7
Q ss_pred cceeeEEEEecCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcce--eEEEEEe
Q 017201 6 AITCKAVVCWGLGE-PLKVEEIQV----EPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEG--VGVVESA 76 (375)
Q Consensus 6 ~~~~~a~~~~~~~~-~l~~~~~~~----p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~--~G~Vv~v 76 (375)
...+|+++...+.. .|++++.++ |+|++|||||||+|+++|+.|++ ..|.... ...|.++|+++ .|.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v 84 (338)
T cd08295 5 QVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVV 84 (338)
T ss_pred EEEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEE
Confidence 34567777655543 488888877 88999999999999999999999 7774332 34578889865 3455557
Q ss_pred CCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec-cc
Q 017201 77 GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NY 155 (375)
Q Consensus 77 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 155 (375)
|++++++++||+|+.. |+|+||+++++ ..
T Consensus 85 ~~~v~~~~vGd~V~~~--------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 85 DSGNPDFKVGDLVWGF--------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred ecCCCCCCCCCEEEec--------------------------------------------------CCceeEEEecchhc
Confidence 8888899999999721 28999999999 79
Q ss_pred EEEcC-CCCCcc-cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 156 VVKVD-PSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 156 ~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
++++| +++++. +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 578876 788899999999999878889999999999998 9999999999999999 8999999999999999
Q ss_pred h-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-----cchHH
Q 017201 233 A-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-----PLNVI 306 (375)
Q Consensus 233 ~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-----~~~~~ 306 (375)
+ +|++.++++.+ +.++.+.++++++ .++|++||++|+. .+..++++++++ |+++.+|....... ..+..
T Consensus 194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~ 268 (338)
T cd08295 194 NKLGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGGK-MLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLL 268 (338)
T ss_pred HhcCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCHH-HHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHH
Confidence 8 99999998654 1467777877776 5899999999985 889999999998 99999986543111 12345
Q ss_pred HhhcCCceEEEEeeccccC--CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 307 ALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.+..+++++.++....... ...+.++++++.++++++. +...|+++++++|++.+++++. +|+|+++
T Consensus 269 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 269 NIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 5666888888765433211 1236778899999999864 4557999999999999988776 5999874
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.8e-39 Score=302.09 Aligned_cols=327 Identities=29% Similarity=0.470 Sum_probs=272.7
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201 10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDI 88 (375)
Q Consensus 10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~ 88 (375)
||+++.+++..+++++.|.|.+.+++++|++.++++|++|++ +.+..+...+|.++|||++|+|+++|+++..+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 688898887679999999999999999999999999999999 8776654557889999999999999999999999999
Q ss_pred EEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201 89 VIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 167 (375)
Q Consensus 89 V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~ 167 (375)
|++.+. .+|+.|++|++++.++|++.... ++..+ |+|++|+.++.+.++++|+++++.+
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~~~~ 140 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYTTQ------------------GGYAEYMVADAEYTVLLPDGLPLAQ 140 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc--CcccC------------------CccccEEEEcHHHeEECCCCCCHHH
Confidence 987654 78999999999999999986542 32223 3899999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
++.+++.+.+||+++.. .+++++++|||+|+|.+|++++++|+..|+ +|+++++++++.++++++|++.+++...
T Consensus 141 ~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--- 215 (330)
T cd08245 141 AAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--- 215 (330)
T ss_pred hhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---
Confidence 99999999999998754 789999999999888899999999999999 8999999999999999999988887654
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS 327 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (375)
.+.... .. .++|++||++++...+..++++++++ |+++.++........++...+..++.++.++.... ..
T Consensus 216 ~~~~~~----~~-~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 286 (330)
T cd08245 216 ELDEQA----AA-GGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RA 286 (330)
T ss_pred cchHHh----cc-CCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HH
Confidence 333222 22 37999999988766889999999998 99999986543333333445666888888775432 34
Q ss_pred CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
.+..+++++.++.+++ ..+.++++++.++++.+.+++. .|+|+
T Consensus 287 ~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 287 DLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 6778889999999874 3468999999999999988776 47764
No 82
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=9.9e-39 Score=296.78 Aligned_cols=301 Identities=25% Similarity=0.413 Sum_probs=256.0
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+++ +.+++++++.|++.+++|+||+.++++|++|++ ..+.......|.++|+|++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888755 359999999999999999999999999999998 77765434457899999999999999999999999
Q ss_pred CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
|+|+..+. .+|+.|++|.++..+.|+..+. +|...+ |+|++|+.++.+.++++|+++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lp~~~~~ 140 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQAD------------------GGFAEYVLVPEESLHELPENLSL 140 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeecCC------------------CceEEEEEcchHHeEECcCCCCH
Confidence 99998774 7899999999999999987532 232222 49999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHhhhcCCcEEeCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID--KNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~--~~~~~~~~~~~lg~~~v~~~~ 243 (375)
++++ ++..+.+||+++...+++++|++|||.|+|.+|++++|+|+..|+ +|+++. +++++.++++++|++.+ +..
T Consensus 141 ~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~ 217 (306)
T cd08258 141 EAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGG 217 (306)
T ss_pred HHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCC
Confidence 9887 666888999998888899999999998889999999999999999 787763 34567788899999877 776
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
. .++...+.++..++++|++||++|+...+..++++++++ |+++.+|........++...++++++++.|+..++
T Consensus 218 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 292 (306)
T cd08258 218 E---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST- 292 (306)
T ss_pred c---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc-
Confidence 5 678888888777778999999998766889999999998 99999998754456777778878999999987653
Q ss_pred cCCCCHHHHHHHHHcC
Q 017201 324 KTKSDLPTLLDKCKNK 339 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~ 339 (375)
+++++++++++++|
T Consensus 293 --~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 --PASWETALRLLASG 306 (306)
T ss_pred --hHhHHHHHHHHhcC
Confidence 56799999998765
No 83
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.2e-38 Score=301.13 Aligned_cols=299 Identities=21% Similarity=0.215 Sum_probs=233.8
Q ss_pred CeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-cc---CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeecc
Q 017201 20 PLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CS---EGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYI 94 (375)
Q Consensus 20 ~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~---g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 94 (375)
.+++++.|.|+| +++||+|||.|+|||+.|.. .. +......+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 22 ~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 100 (345)
T cd08293 22 NFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN- 100 (345)
T ss_pred ceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-
Confidence 388899999987 49999999999999999864 32 2111235678999999999999999999999999997321
Q ss_pred CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc----ccc
Q 017201 95 GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD----ASF 170 (375)
Q Consensus 95 ~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~----aa~ 170 (375)
++|+||++++++.++++|+++++.+ +++
T Consensus 101 ------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 101 ------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred ------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 2799999999999999999865443 455
Q ss_pred cccchhhhhhhhhhhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCC
Q 017201 171 LSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEP 246 (375)
Q Consensus 171 l~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~ 246 (375)
++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|++.|+.+|+++++++++.+++++ +|++.++++.+
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-- 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-- 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--
Confidence 677899999988778888877 99999998 9999999999999998679999999999999876 99999998876
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC--cc----ccchH--HHhh-cCCceEEE
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--AM----VPLNV--IALA-CGGRTLKG 317 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~----~~~~~--~~~~-~~~~~~~~ 317 (375)
.++.+.++++++ +++|++||++|+. .+..++++++++ |+++.+|.... .. ..+++ ..+. .+++++..
T Consensus 211 -~~~~~~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (345)
T cd08293 211 -DNVAERLRELCP-EGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRER 286 (345)
T ss_pred -CCHHHHHHHHCC-CCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEE
Confidence 678888888876 5899999999987 679999999998 99999985321 11 11111 1121 23444333
Q ss_pred Eeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 318 TTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 318 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
....... ..+.++++++++.++++++. ....++++++++|++.+.+++. +|+|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 287 FLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 2211110 01235667889999999864 4456799999999999988776 5999875
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.2e-38 Score=299.15 Aligned_cols=304 Identities=22% Similarity=0.201 Sum_probs=245.7
Q ss_pred eeeEEEEecC--CC----CeEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 017201 8 TCKAVVCWGL--GE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVK 81 (375)
Q Consensus 8 ~~~a~~~~~~--~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~ 81 (375)
.|||+++... +. .+++++.+.|+|+++||+|||.++++|+.|.++... ...+|.++|+|++|+|++ .++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~~~~p~v~G~e~~G~V~~---~~~ 76 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--LNEGDTMIGTQVAKVIES---KNS 76 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--CCCCCcEecceEEEEEec---CCC
Confidence 5888888772 32 388899999999999999999999999988652211 124688999999999985 456
Q ss_pred CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc---cEEE
Q 017201 82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN---YVVK 158 (375)
Q Consensus 82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~ 158 (375)
.+++||+|+.. ++|++|+.++.+ .+++
T Consensus 77 ~~~~Gd~V~~~--------------------------------------------------~~~~~~~~~~~~~~~~~~~ 106 (329)
T cd08294 77 KFPVGTIVVAS--------------------------------------------------FGWRTHTVSDGKDQPDLYK 106 (329)
T ss_pred CCCCCCEEEee--------------------------------------------------CCeeeEEEECCccccceEE
Confidence 79999999732 178999999999 9999
Q ss_pred cCCCCC--c---ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 159 VDPSID--P---SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 159 lp~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
+|++++ . ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++
T Consensus 107 iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~ 185 (329)
T cd08294 107 LPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLK 185 (329)
T ss_pred CCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 999998 2 2234678899999999888889999999999986 9999999999999999 8999999999999999
Q ss_pred hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-c-----ccchHH
Q 017201 233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-M-----VPLNVI 306 (375)
Q Consensus 233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~-----~~~~~~ 306 (375)
++|++.++++++ .++.+.++++++ .++|++||++|+. .+..++++++++ |+++.+|..... . ......
T Consensus 186 ~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~ 259 (329)
T cd08294 186 ELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGGE-FSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQE 259 (329)
T ss_pred HcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCHH-HHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHH
Confidence 999999999887 678888888776 4899999999985 889999999998 999999854321 1 122233
Q ss_pred HhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 307 ALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.+..+++++.++....+. ....+.+++++++++++++. ....++++++++|++.+.+++. +|+|+++
T Consensus 260 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 260 TIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 456688888886543221 11235678889999999865 3456899999999999988776 5999875
No 85
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3e-38 Score=296.13 Aligned_cols=292 Identities=19% Similarity=0.200 Sum_probs=236.6
Q ss_pred CeEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCC
Q 017201 20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKE 99 (375)
Q Consensus 20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~ 99 (375)
.+++++.+.|+|++|||+|||.++++|+.|.. |.++....|.++|+|++|+|+++|+ .+++||+|+..
T Consensus 18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~--g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV--AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc--ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 38889999999999999999999999997665 2222233478999999999999874 59999999732
Q ss_pred CchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc----CCCCCcccc-cccccc
Q 017201 100 CENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV----DPSIDPSDA-SFLSCG 174 (375)
Q Consensus 100 c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l----p~~~~~~~a-a~l~~~ 174 (375)
++|++|+.++.+.+.++ |++++++++ ++++++
T Consensus 86 -------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~ 122 (325)
T TIGR02825 86 -------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMP 122 (325)
T ss_pred -------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccH
Confidence 16899999999988888 899999987 678889
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHH
Q 017201 175 FTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL 253 (375)
Q Consensus 175 ~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~ 253 (375)
+.|||+++.+.+++++|++|||+|+ |++|++++|+||..|+ +|+++++++++.++++++|++.++++++ .+++.+.
T Consensus 123 ~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~ 199 (325)
T TIGR02825 123 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEET 199 (325)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHH
Confidence 9999999888899999999999987 9999999999999999 8999999999999999999999998875 1245555
Q ss_pred HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc----ccc--chHHHhhcCCceEEEEeeccccC--
Q 017201 254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA----MVP--LNVIALACGGRTLKGTTFGGIKT-- 325 (375)
Q Consensus 254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 325 (375)
++...+ .++|++||++|+. .+..++++++++ |+++.+|..... ... .....+..+++++.++....+..
T Consensus 200 ~~~~~~-~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 200 LKKASP-DGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHhCC-CCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 665554 4899999999987 679999999998 999999865321 111 12334555788888765432211
Q ss_pred -CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 326 -KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.+.+.++++++++|++++. +...|+++++++|++.+.+++. +|+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 2357789999999999865 4567899999999999988776 598874
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=6.4e-38 Score=295.77 Aligned_cols=315 Identities=29% Similarity=0.365 Sum_probs=259.4
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCCCccc-ccCCCCC-CC----CCcccCcceeEEEEEeCC
Q 017201 9 CKAVVCWGLGEP---LKVEEIQVEPPKS-TEVRVKMLYASVCHTDIL-CSEGFPA-PL----YPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 9 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~ev~V~v~~~~i~~~D~~-~~g~~~~-~~----~p~i~G~e~~G~Vv~vG~ 78 (375)
|||+++...+.+ +.+++.|.|+|.+ ++|+||+.++++|++|++ +.|..+. .. +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988865 8999999998887 999999999999999999 8776543 12 677999999999999999
Q ss_pred CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201 79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK 158 (375)
Q Consensus 79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 158 (375)
+++.+++||+|+.... +.|+|++|+.++.+.+++
T Consensus 81 ~v~~~~~Gd~V~~~~~----------------------------------------------~~g~~~~~~~v~~~~~~~ 114 (341)
T cd08290 81 GVKSLKPGDWVIPLRP----------------------------------------------GLGTWRTHAVVPADDLIK 114 (341)
T ss_pred CCCCCCCCCEEEecCC----------------------------------------------CCccchheEeccHHHeEe
Confidence 9999999999985421 114899999999999999
Q ss_pred cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHhhh
Q 017201 159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP----WKKEKGKA 233 (375)
Q Consensus 159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~----~~~~~~~~ 233 (375)
+|+++++++++.+++.+.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +|+++++++ ++.+.+++
T Consensus 115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~ 193 (341)
T cd08290 115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKA 193 (341)
T ss_pred CCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHh
Confidence 99999999999999999999998877788999999999987 9999999999999999 788887765 66788889
Q ss_pred cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201 234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR 313 (375)
Q Consensus 234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 313 (375)
+|++.++++++....++...++.+.++ ++|++||++|+. .+..++++++++ |+++.+|........+++..++.+++
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 270 (341)
T cd08290 194 LGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQPVTVPTSLLIFKDI 270 (341)
T ss_pred cCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCCCcccCHHHHhhCCc
Confidence 999999887651001677778877777 899999999987 677899999997 99999985543334556655566899
Q ss_pred eEEEEeeccccC---C----CCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 314 TLKGTTFGGIKT---K----SDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 314 ~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
++.+........ . ..+..+++++.++++++. ....+ ++++++++++.+.+++. .|+|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 271 TLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred eEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 999876543211 1 136778888999998754 34456 99999999999987766 4999875
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.2e-37 Score=289.93 Aligned_cols=331 Identities=26% Similarity=0.349 Sum_probs=271.5
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++...+ +.+++++.+.|.++++|++|++.++++|++|++ ..|..+. ...|.++|||++|+|+++|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998664 458888888888899999999999999999999 7776543 34688999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|++.+...|+.|..| .|.... ..|...+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~--~~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~ 134 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEAS--ALGGPID------------------GVLAEYVVLPEEGLVRAPDHLS 134 (336)
T ss_pred CCCEEEEeccccccccccc------cccccc--ccccccC------------------ceeeeEEEecHHHeEECCCCCC
Confidence 9999998776666554433 332211 1122222 4899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
+.+++.+++.+.+||+++.+.+.+++|++|+|+|+|++|++++++|++.|+ +|+++++++++.++++++|.+.+++.+.
T Consensus 135 ~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 213 (336)
T cd08276 135 FEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT 213 (336)
T ss_pred HHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc
Confidence 999999999999999988777899999999999889999999999999999 8999999999999999999988887653
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (375)
..++.+.+++.+++.++|++||+++.. .+..++++++++ |+++.+|.........+...++.+++++.+.....
T Consensus 214 --~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (336)
T cd08276 214 --TPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-- 287 (336)
T ss_pred --ccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence 145777888888877999999999865 788999999998 99999987654333455566667999999876542
Q ss_pred CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
...+.++++++.++.+.+. ..+.+++++++++++.+.+++. .|+++++
T Consensus 288 -~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 -RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3567888899988887643 5678999999999999987766 4888864
No 88
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.3e-38 Score=293.71 Aligned_cols=316 Identities=23% Similarity=0.266 Sum_probs=257.0
Q ss_pred eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 8 TCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 8 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
+||++++.+++.+ +++++++.|+++++||+||+.++++|++|++ ..+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887653 8888999999999999999999999999999 777765555788999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+.... +.|+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~~ 114 (327)
T PRK10754 81 VGDRVVYAQS----------------------------------------------ALGAYSSVHNVPADKAAILPDAIS 114 (327)
T ss_pred CCCEEEECCC----------------------------------------------CCcceeeEEEcCHHHceeCCCCCC
Confidence 9999973210 113899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+++++.+++.+.+||.++...+.+++|++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.+++.+
T Consensus 115 ~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 193 (327)
T PRK10754 115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR 193 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC
Confidence 99999988899999998877788999999999976 9999999999999999 899999999999999999998888877
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE-EEee-c
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK-GTTF-G 321 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 321 (375)
+ .++.+.+++.+++.++|++||++++. .+..++++++++ |+++.+|........++...+..++..+. .... .
T Consensus 194 ~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (327)
T PRK10754 194 E---ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQG 268 (327)
T ss_pred C---CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeec
Confidence 6 67888888888888999999999985 788899999998 99999986643222333333332222111 1111 1
Q ss_pred cccCC----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 322 GIKTK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 322 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..... ..+..+++++.++++++.....+.|++++++++++.+.+++. .|+||..
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 269 YITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 01111 123457889999999865555789999999999999988776 5999863
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.3e-37 Score=292.98 Aligned_cols=308 Identities=19% Similarity=0.211 Sum_probs=247.1
Q ss_pred eEEEEecC---CC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 10 KAVVCWGL---GE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 10 ~a~~~~~~---~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
||+++.++ +. .++++++|.|+|+++||+|||.++++|++|++ +.+..+...+|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 56777775 43 37778889999999999999999999999998 77765555678899999999999999999999
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
++||+|+.... ... .|+|++|++++++.++++|+++
T Consensus 81 ~~Gd~V~~~~~--------------------------~~~------------------~g~~~~~~~v~~~~~~~ip~~~ 116 (336)
T TIGR02817 81 KPGDEVWYAGD--------------------------IDR------------------PGSNAEFHLVDERIVGHKPKSL 116 (336)
T ss_pred CCCCEEEEcCC--------------------------CCC------------------CCcccceEEEcHHHcccCCCCC
Confidence 99999984310 001 1489999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCC-----CCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM 236 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~ 236 (375)
++++++.+++++.|||+++...+++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++|+
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~ 195 (336)
T TIGR02817 117 SFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGA 195 (336)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCC
Confidence 999999999999999999877788877 999999987 99999999999998 98 89999999999999999999
Q ss_pred cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK 316 (375)
Q Consensus 237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
+.++++.. ++.+.+++. .++++|+++|++++...+..++++++++ |+++.++.. ..++...+..+++++.
T Consensus 196 ~~~~~~~~----~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 196 HHVIDHSK----PLKAQLEKL-GLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP----AELDISPFKRKSISLH 265 (336)
T ss_pred CEEEECCC----CHHHHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc----ccccchhhhhcceEEE
Confidence 99887543 566777775 3448999999987666889999999997 999988532 2445555554667666
Q ss_pred EEeec--cccC-------CCCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEe
Q 017201 317 GTTFG--GIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 317 ~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+.... .... ...+.++++++.++.+++. +.+.+ +++++++|++.+.+++. .|+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 54322 1100 1236778899999998743 34444 46899999999988776 588874
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.4e-37 Score=287.77 Aligned_cols=313 Identities=22% Similarity=0.221 Sum_probs=259.2
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
|||+++.+++.+ +.+++.+.|.+.+++|+|++.++++|++|++ ..|..+ ....|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689998876543 6667777777889999999999999999998 776543 2456788999999999999999999
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+++||+|+..... . .|+|++|++++.+.++++|++
T Consensus 81 ~~~Gd~V~~~~~~---------------------------~------------------~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08244 81 AWLGRRVVAHTGR---------------------------A------------------GGGYAELAVADVDSLHPVPDG 115 (324)
T ss_pred CCCCCEEEEccCC---------------------------C------------------CceeeEEEEEchHHeEeCCCC
Confidence 9999999854210 0 148999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~ 241 (375)
+++.+++.+++.+.||| ++...++++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.+++
T Consensus 116 ~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 193 (324)
T cd08244 116 LDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVD 193 (324)
T ss_pred CCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 99999999999999995 4667889999999999986 9999999999999999 8999999999999999999988888
Q ss_pred CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
..+ .++.+.+.+..+++++|+++|++|+. ....+++++++. |+++.+|........++...++.+++++.+....
T Consensus 194 ~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08244 194 YTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEWTALDEDDARRRGVTVVGLLGV 268 (324)
T ss_pred cCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCCCccCHHHHhhCCcEEEEeecc
Confidence 776 67788888888877899999999987 678999999997 9999998765433355655556688998877643
Q ss_pred cccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 322 GIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 322 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.... .+.+.++++++.++++++ ++...++++++++|++.+.+++. .|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 269 QAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2211 234666888899998874 46778999999999999988766 4998864
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-37 Score=289.76 Aligned_cols=312 Identities=29% Similarity=0.340 Sum_probs=258.8
Q ss_pred eeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201 8 TCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 8 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
||||+++.+.+. .+++++.+.|++.++|++|||.++++|+.|+. ..+..+ ....|.++|||++|+|+++|+++..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 699999998775 37777888888899999999999999999998 777553 23456789999999999999999999
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
++||+|+... .+ |+|++|++++.+.++++|+++
T Consensus 81 ~~Gd~V~~~~-----------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~ 113 (334)
T PTZ00354 81 KEGDRVMALL-----------------------------PG------------------GGYAEYAVAHKGHVMHIPQGY 113 (334)
T ss_pred CCCCEEEEec-----------------------------CC------------------CceeeEEEecHHHcEeCCCCC
Confidence 9999997431 11 389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
+..+++.+++++.+||+++...+.+++|++|||+|+ |++|++++++|++.|+ +++.+++++++.+.++++|++.+++.
T Consensus 114 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (334)
T PTZ00354 114 TFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRY 192 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998877788999999999997 9999999999999999 77788889999999999999888887
Q ss_pred CCCCccc-HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHHHhhcCCceEEEEee
Q 017201 243 DDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGTTF 320 (375)
Q Consensus 243 ~~~~~~~-~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 320 (375)
.. .+ +.+.+++.++++++|++||++++. .+..++++++++ |+++.+|........ ++...+..+..++.++..
T Consensus 193 ~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 193 PD---EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred CC---hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence 65 44 778888888777999999999875 889999999997 999999865432322 666666667778888754
Q ss_pred ccccCC-------CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 321 GGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 321 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
...... ..++.+++++.++.+++ ++.+.+++++++++++.+.+++. .|+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~ 327 (334)
T PTZ00354 268 RSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLT 327 (334)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 431110 12356778888898874 36778999999999999987765 588885
No 92
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.2e-36 Score=284.86 Aligned_cols=313 Identities=21% Similarity=0.255 Sum_probs=246.6
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++..+++ ++++++.|.|.++++||+|++.++++|++|+. +.|..+. +.+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999998886 69999999999999999999999999999999 8776543 345789999999999998 456799
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+.. .|+..+ |+|++|++++++.++++|++++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~~~------------------g~~~~~~~v~~~~~~~lp~~~~ 117 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMNTD------------------GGFAEYVRVPADWVVPLPEGLS 117 (325)
T ss_pred CCCEEEEcccc-----------------------cCCCCC------------------ceeEEEEEEchhhEEECCCCCC
Confidence 99999864310 122222 3999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhc--CCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 165 PSDASFLSCGFTTGYGAAWKEA--KVE-KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
+++++.+++.+.+||.++.... ++. .+++|||+|+ |++|++++++|+..|+ +|+++++++++++.++++|++.++
T Consensus 118 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 196 (325)
T cd05280 118 LREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVL 196 (325)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence 9999999999999998875443 335 3579999998 9999999999999999 799999999999999999999888
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
+.++ . ...+.+...++++|++||++++. .+..+++++++. |+++.+|........+++..++.+++++.+...
T Consensus 197 ~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 197 DRED---L--LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred cchh---H--HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 7654 2 22333334444799999999986 889999999997 999999876533335566666568999888765
Q ss_pred ccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 321 GGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 321 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..... ...+..+.+++..+.. +.+..++++++++++++.+.+++. +|+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 43211 0112334444445522 236779999999999999988877 5999875
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.1e-36 Score=284.00 Aligned_cols=309 Identities=24% Similarity=0.276 Sum_probs=253.9
Q ss_pred eeeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201 8 TCKAVVCWGLGE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK 81 (375)
Q Consensus 8 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~ 81 (375)
+|||+++.+++. ++++++++.|.+.++|++||+.++++|++|++ ..|.++. ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 589999987665 58899999999999999999999999999999 7776543 45788999999999999999999
Q ss_pred CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201 82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 161 (375)
Q Consensus 82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~ 161 (375)
.+++||+|+... .|+|++|++++.+.++++|+
T Consensus 81 ~~~~Gd~V~~~~------------------------------------------------~g~~~s~~~v~~~~~~~ip~ 112 (329)
T cd08250 81 DFKVGDAVATMS------------------------------------------------FGAFAEYQVVPARHAVPVPE 112 (329)
T ss_pred CCCCCCEEEEec------------------------------------------------CcceeEEEEechHHeEECCC
Confidence 999999998432 13899999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
+ +.+++.+++++.|||+++.+..++++|++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.++
T Consensus 113 ~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 189 (329)
T cd08250 113 L--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPI 189 (329)
T ss_pred C--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEE
Confidence 7 45677888899999999877788999999999987 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc----------cccchHHHhhc
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA----------MVPLNVIALAC 310 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~----------~~~~~~~~~~~ 310 (375)
+..+ .++.+.+....+ +++|++||++|+. .+..++++++++ |+++.+|..... ...++.. .+.
T Consensus 190 ~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 262 (329)
T cd08250 190 NYKT---EDLGEVLKKEYP-KGVDVVYESVGGE-MFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPK-LLA 262 (329)
T ss_pred eCCC---ccHHHHHHHhcC-CCCeEEEECCcHH-HHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHH-Hhh
Confidence 7665 566666766655 5899999999975 789999999997 999999866431 1123333 344
Q ss_pred CCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 311 GGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 311 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+++++.+....... ....+.++++++.++.+++.....+.++++++++|++.+.+++. .|+|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 263 KSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred cCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 88888887643221 12346778889999988864334556899999999999987766 488874
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4.6e-36 Score=282.95 Aligned_cols=311 Identities=25% Similarity=0.311 Sum_probs=248.0
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++++++ +.+++++.+.|+|+++||+|++.++++|++|++ ..+.. ...+|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999884 458899999999999999999999999999998 65544 22356789999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|+..+...|+ +. ...|+|++|+.++.+.++++|++++++
T Consensus 80 d~V~~~~~~~~~---------------------~~------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 80 DRVAGFVHGGNP---------------------ND------------------PRNGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred CEEEEEeccccC---------------------CC------------------CCCCcccceEEechhheEECCCCCCHH
Confidence 999976543221 11 112499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKV----------EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 235 (375)
+++.+++.+.|||+++.+..++ +++++|||+|+ |++|++++++|+..|+ +|+++. ++++.+.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999987665544 79999999998 9999999999999999 888887 568999999999
Q ss_pred CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhccc--CCeEEEEEccCCCccccchHHHhhcCCc
Q 017201 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV--GKGKVIVIGVGVDAMVPLNVIALACGGR 313 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 313 (375)
++.+++..+ .++.+.++++++ .++|++||++|++..+..+++++++ + |+++.+|...... .+ ..+.
T Consensus 199 ~~~v~~~~~---~~~~~~l~~~~~-~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-~~------~~~~ 266 (339)
T cd08249 199 ADAVFDYHD---PDVVEDIRAATG-GKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-EP------RKGV 266 (339)
T ss_pred CCEEEECCC---chHHHHHHHhcC-CCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-cC------CCCc
Confidence 999988876 678888887776 4899999999985588999999999 8 9999998665311 01 1222
Q ss_pred eEEEEeeccc---------cCCCCHHHHHHHHHcCCCCCCcceeeEee--cccHHHHHHHHcCCC-e-eEEEEeC
Q 017201 314 TLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKLHQLLTHHVK--LEEIDKAIQLLKQPD-C-VKVLITI 375 (375)
Q Consensus 314 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~-~kvvi~~ 375 (375)
++........ .....+..+++++.++++.+.+ ...++ ++++++|++.+.+++ . .|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 267 KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 2222211111 1112356688889999988653 34566 999999999998887 5 5999875
No 95
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-35 Score=276.53 Aligned_cols=300 Identities=25% Similarity=0.329 Sum_probs=247.4
Q ss_pred CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-c-cCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccC
Q 017201 20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-C-SEGFPA--PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG 95 (375)
Q Consensus 20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~-~g~~~~--~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 95 (375)
.+++++++.|++.++||+|++.++++|++|++ + .+..+. +.+|.++|+|++|+|+++|++++.+++||+|+..+
T Consensus 6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 83 (312)
T cd08269 6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-- 83 (312)
T ss_pred eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence 48999999999999999999999999999998 7 665421 23578999999999999999999999999998542
Q ss_pred CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccch
Q 017201 96 ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175 (375)
Q Consensus 96 ~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~ 175 (375)
.|+|++|+.++++.++++|+++ ..++....++
T Consensus 84 ----------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~ 115 (312)
T cd08269 84 ----------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPL 115 (312)
T ss_pred ----------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhH
Confidence 1389999999999999999998 2333222678
Q ss_pred hhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHH
Q 017201 176 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255 (375)
Q Consensus 176 ~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~ 255 (375)
++|++++. .+++++|++|||+|+|.+|++++++|+..|+.+|+++++++++.++++++|++.+++.+. .++.+.+.
T Consensus 116 ~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~ 191 (312)
T cd08269 116 GCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVR 191 (312)
T ss_pred HHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHH
Confidence 88888765 788999999999988999999999999999933999999999999999999988888765 67888888
Q ss_pred hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-cCCCCHHHHHH
Q 017201 256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-KTKSDLPTLLD 334 (375)
Q Consensus 256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 334 (375)
+++++.++|++||++|+...+..++++++++ |+++.+|........+++..+..+++++.++..... ...+.++.+++
T Consensus 192 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (312)
T cd08269 192 ELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVK 270 (312)
T ss_pred HHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHH
Confidence 8888789999999998776789999999997 999999865433455566666668888776643221 11246888999
Q ss_pred HHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe--eEEEEe
Q 017201 335 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLIT 374 (375)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvi~ 374 (375)
+++++++++...+.+.+++++++++++.+.+++. +|+++.
T Consensus 271 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 312 (312)
T cd08269 271 LIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVIV 312 (312)
T ss_pred HHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999998865456778999999999999988764 698873
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=282.86 Aligned_cols=299 Identities=28% Similarity=0.414 Sum_probs=227.6
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-C---CCCcccCcceeEEE---EEeC-CCCCCCCCCCEEEe
Q 017201 21 LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-P---LYPRVLGHEGVGVV---ESAG-DEVKEVKEGDIVIP 91 (375)
Q Consensus 21 l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~---~~p~i~G~e~~G~V---v~vG-~~v~~~~~Gd~V~~ 91 (375)
...++.++|.|.+++++|++.++++|+.|+. ..|.... + .+|.+++.++.|.+ ...| ..+..+..||.++.
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5557899999999999999999999999999 7777654 3 47766555555553 3334 22334555555542
Q ss_pred eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccccc
Q 017201 92 TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFL 171 (375)
Q Consensus 92 ~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l 171 (375)
...+ |+|+||+.+++..++++|+++++.+||++
T Consensus 100 -----------------------------~~~~------------------g~~aey~v~p~~~~~~~P~~l~~~~aa~~ 132 (347)
T KOG1198|consen 100 -----------------------------FLSS------------------GGLAEYVVVPEKLLVKIPESLSFEEAAAL 132 (347)
T ss_pred -----------------------------ccCC------------------CceeeEEEcchhhccCCCCccChhhhhcC
Confidence 1222 49999999999999999999999999999
Q ss_pred ccchhhhhhhhhhhc------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 172 SCGFTTGYGAAWKEA------KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 172 ~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
|.++.|||.++...+ ++++|++|||+|+ |++|++|+|+|++.|+ ..++++.++++.++++++|++.++|+++
T Consensus 133 p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 133 PLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred chHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 999999999999998 8999999999977 9999999999999996 4555556899999999999999999998
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh--cCCce-----EEE
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA--CGGRT-----LKG 317 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~--~~~~~-----~~~ 317 (375)
+++.+.+++.+ +.+||+||||+|+. ....+..++... |+...++..++.....+...++ .+.+. +.+
T Consensus 212 ---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 212 ---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred ---HHHHHHHHhhc-CCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 89999999988 66999999999997 667888888886 7655555444311111111000 01111 111
Q ss_pred Eeec---cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 318 TTFG---GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 318 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..+. .....+.+..+.+++++++++ +.+.+.||++++.+|++.+.++.. +|+++.+
T Consensus 286 ~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 286 VNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred cceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence 1110 012234578899999999877 558999999999999999987555 6998864
No 97
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=9.2e-36 Score=279.25 Aligned_cols=314 Identities=20% Similarity=0.219 Sum_probs=242.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++...+.+ +.+++.|.|.|+++||+||+.++++|++|+. ..+.. ....+|.++|||++|+|+++| +..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999887763 8889999999999999999999999999987 54321 123458899999999999964 56799
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+.. .|...+ |+|++|++++++.++++|++++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~ 117 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVSHH------------------GGYSEYARVPAEWVVPLPKGLT 117 (326)
T ss_pred CCCEEEEcccc-----------------------cCCCCC------------------CcceeEEEEcHHHeEECCCCCC
Confidence 99999865321 121122 4999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhh--cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 165 PSDASFLSCGFTTGYGAAWKE--AKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~--~~~-~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
+++++.+++.+.||+.++... .++ ..+++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++
T Consensus 118 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 196 (326)
T cd08289 118 LKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVI 196 (326)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEE
Confidence 999999999999998876432 233 34789999998 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
+.++ . ..+.++++. +.++|++||++|+. .+..++++++++ |+++.+|.......++++..++.+++++.+...
T Consensus 197 ~~~~---~-~~~~~~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 197 PREE---L-QEESIKPLE-KQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred cchh---H-HHHHHHhhc-cCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEEeecCCCCCCcchhhhhhccceEEEEEe
Confidence 8765 2 345556664 45899999999985 889999999998 999999976433344446666668999988753
Q ss_pred ccccCCCCHHHHHHHHHcCCCCC---CcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 321 GGIKTKSDLPTLLDKCKNKEFKL---HQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
... .......+++.+.. .+.+ ...+.++++++++++|++.+.+++. .|+|+++
T Consensus 270 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 270 VEC-PMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred Eec-CchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 211 01122333333322 2221 1235789999999999999988877 4998864
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-35 Score=277.80 Aligned_cols=299 Identities=25% Similarity=0.348 Sum_probs=253.5
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCC
Q 017201 21 LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECK 98 (375)
Q Consensus 21 l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~ 98 (375)
+.+++.+.|++.+++|+||+.++++|+.|+. +.+..+. +.+|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 6677888888999999999999999999998 7665532 356789999999999999999999999999985431
Q ss_pred CCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhh
Q 017201 99 ECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178 (375)
Q Consensus 99 ~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 178 (375)
.|+|++|+.++.+.++++|+++++.+++.+++.+.+|
T Consensus 90 -------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta 126 (323)
T cd05282 90 -------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTA 126 (323)
T ss_pred -------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHH
Confidence 1389999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhh
Q 017201 179 YGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 179 ~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
|+++.....+.+|++|||+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|++.+++..+ .++...+.++
T Consensus 127 ~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~ 202 (323)
T cd05282 127 WLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEA 202 (323)
T ss_pred HHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHH
Confidence 998877778899999999988 9999999999999999 8999999999999999999999998876 5788888888
Q ss_pred cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC-------CCCHH
Q 017201 258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLP 330 (375)
Q Consensus 258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 330 (375)
++++++|++||++|+. ....++++++++ |+++.+|........++...+..+++++.+.....+.. ...+.
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFA 280 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHH
Confidence 8888999999999987 567889999997 99999987653334566666666899998877554321 12466
Q ss_pred HHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 331 TLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
.+++++.++++.+. ..+.+++++++++++.+.+++. .|+|++
T Consensus 281 ~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 281 EVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 78888999988743 5788999999999999987766 488763
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-35 Score=276.21 Aligned_cols=310 Identities=24% Similarity=0.362 Sum_probs=248.7
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
||++++...+. .+.+++.+.|.++++||+||+.++++|++|++ ..+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 68888877663 36777888888899999999999999999999 877665556688999999999999995 57999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|++.... ++...+ |+|++|+.++++.++++|+++++
T Consensus 79 Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 117 (320)
T cd08243 79 GQRVATAMGG-----------------------MGRTFD------------------GSYAEYTLVPNEQVYAIDSDLSW 117 (320)
T ss_pred CCEEEEecCC-----------------------CCCCCC------------------cccceEEEcCHHHcEeCCCCCCH
Confidence 9999865321 011112 38999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
++++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|++.|+ +|+++++++++.+.++++|++.+++. .
T Consensus 118 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~ 195 (320)
T cd08243 118 AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D 195 (320)
T ss_pred HHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C
Confidence 9999999999999999888788999999999998 9999999999999999 89999999999999999999887754 3
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc--cccchHHHh--hcCCceEEEEee
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA--MVPLNVIAL--ACGGRTLKGTTF 320 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~~~~~~~~--~~~~~~~~~~~~ 320 (375)
.++.+.++++ +.++|++||++++. .+..++++++++ |+++.+|..... ......... ..+++++.+...
T Consensus 196 ---~~~~~~i~~~--~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 196 ---GAIAEQLRAA--PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred ---ccHHHHHHHh--CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 4677777777 45899999999985 789999999997 999999865321 111112221 246777776643
Q ss_pred ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
... ....+..++++++++.+++ +..+.++++++++|++.+.+++. .|+|+
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 1234677888999998875 35678999999999999987766 47775
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.9e-35 Score=274.04 Aligned_cols=310 Identities=22% Similarity=0.265 Sum_probs=244.7
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
||+++...+. .++++++|+|.++++||+||+.++++|++|++ +.|.++. ...|.++|||++|+|+. ++++.+++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 5788887665 46899999999999999999999999999999 8776532 34588899999999988 56678999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|++.+.. .|...+ |+|++|+.++.+.++++|+++++
T Consensus 79 Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~~~~~~~~~iP~~~~~ 117 (323)
T TIGR02823 79 GDEVIVTGYG-----------------------LGVSHD------------------GGYSQYARVPADWLVPLPEGLSL 117 (323)
T ss_pred CCEEEEccCC-----------------------CCCCCC------------------ccceEEEEEchhheEECCCCCCH
Confidence 9999865321 011112 49999999999999999999999
Q ss_pred ccccccccchhhhhhhhhh--hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201 166 SDASFLSCGFTTGYGAAWK--EAKVEKGS-SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~ 241 (375)
++++.+++.+.+|+.++.. ..++.+|+ +|||+|+ |++|++++++|+++|+ +++++++++++.+.++++|++.+++
T Consensus 118 ~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~ 196 (323)
T TIGR02823 118 REAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVID 196 (323)
T ss_pred HHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEc
Confidence 9999999999999877533 34488999 9999998 9999999999999999 8888888888889999999988887
Q ss_pred CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
.++ .+. .++.+..+ ++|+++|++|+. .+..++.+++++ |+++.+|.......+.+...++.+++++.+....
T Consensus 197 ~~~---~~~--~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 197 RED---LSP--PGKPLEKE-RWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc---HHH--HHHHhcCC-CceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEecc
Confidence 654 222 44555555 599999999987 788999999998 9999999765333444545565688998886533
Q ss_pred cccCCC----CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201 322 GIKTKS----DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375 (375)
Q Consensus 322 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 375 (375)
.. ... .+..+.+++..+.+++ + .+.++++++++|++.+.+++.. |+|+++
T Consensus 269 ~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 269 YC-PMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cc-CchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 21 111 2345556666777653 3 4589999999999999888774 998864
No 101
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1e-35 Score=259.90 Aligned_cols=296 Identities=22% Similarity=0.265 Sum_probs=241.4
Q ss_pred CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEe--CCCCCCCCCCCEEEeeccCC
Q 017201 20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESA--GDEVKEVKEGDIVIPTYIGE 96 (375)
Q Consensus 20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~v--G~~v~~~~~Gd~V~~~~~~~ 96 (375)
+|+++++++|+|++||||||+.|.++.| .+. +....+.--.|.-+|...+|.++.. -|+..+|++||.|+...
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DP-ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--- 101 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--- 101 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCH-HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence 4999999999999999999999999998 443 4444332223556676665544332 25677899999997321
Q ss_pred CCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc--ccccc
Q 017201 97 CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS--FLSCG 174 (375)
Q Consensus 97 ~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa--~l~~~ 174 (375)
+|++|.+++...+.|++++.-+..+. .+.++
T Consensus 102 -----------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmp 134 (340)
T COG2130 102 -----------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP 134 (340)
T ss_pred -----------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcCCc
Confidence 89999999999999998765444443 36678
Q ss_pred hhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHH
Q 017201 175 FTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISE 252 (375)
Q Consensus 175 ~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~ 252 (375)
..|||.+|.+.+++++|++|+|.+| |++|..+.|+||..|+ +|+.++.++||.+++++ +|.|.++|++. +++.+
T Consensus 135 G~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~ 210 (340)
T COG2130 135 GLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQ 210 (340)
T ss_pred hHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHH
Confidence 9999999999999999999999988 9999999999999999 99999999999999987 99999999998 79999
Q ss_pred HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc------chHHHhhcCCceEEEEeecc-cc-
Q 017201 253 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP------LNVIALACGGRTLKGTTFGG-IK- 324 (375)
Q Consensus 253 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~- 324 (375)
.+++.++. |+|+.||++|++ .+...+..|+.. +|++.||.-+.+..+ -.+..++.+.+++.|....+ +.
T Consensus 211 ~L~~a~P~-GIDvyfeNVGg~-v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~ 287 (340)
T COG2130 211 ALKEACPK-GIDVYFENVGGE-VLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ 287 (340)
T ss_pred HHHHHCCC-CeEEEEEcCCch-HHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence 99999986 999999999998 999999999997 999999976541111 12233556789999987632 21
Q ss_pred -CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201 325 -TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375 (375)
Q Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 375 (375)
..+..+++..|+++|+|+... +.+-.||++++||.-+.+++++ |.|+++
T Consensus 288 ~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 288 RFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred hhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEe
Confidence 124467889999999999764 5566899999999999999995 999874
No 102
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-35 Score=273.06 Aligned_cols=298 Identities=22% Similarity=0.279 Sum_probs=242.4
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
|||+++.+.+ ..+.+++.+.|.++++||+||+.++++|++|++ .... ..|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 5788887754 126666888889999999999999999999998 5521 235789999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|+... .+ |+|++|+.++.+.++++|++++++
T Consensus 77 d~V~~~~-----------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~~~~ 109 (305)
T cd08270 77 ARVVGLG-----------------------------AM------------------GAWAELVAVPTGWLAVLPDGVSFA 109 (305)
T ss_pred CEEEEec-----------------------------CC------------------cceeeEEEEchHHeEECCCCCCHH
Confidence 9997431 11 399999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
+++++++.+.|||+++...... +|++|+|+|+ |++|++++++|+..|+ +|+.+++++++.+.++++|++.+++..+
T Consensus 110 ~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 186 (305)
T cd08270 110 QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS- 186 (305)
T ss_pred HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc-
Confidence 9999999999999987655444 6999999998 9999999999999999 8999999999999999999876554322
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhc--CCceEEEEeecc-
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC--GGRTLKGTTFGG- 322 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 322 (375)
+ +.+ .++|+++|++|+. .+..++++++++ |+++.+|........+++..+.. ++.++.+.....
T Consensus 187 ---~-------~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (305)
T cd08270 187 ---E-------LSG-APVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDG 253 (305)
T ss_pred ---c-------ccC-CCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCCCcccccHHHHhcccccceEEEEEccCH
Confidence 1 122 3799999999987 789999999998 99999986643334556666554 588888876442
Q ss_pred ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
......+..+++++.++++++. +.+++++++++++++.+.+++. .|+|+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 254 EPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1112457778899999999853 6779999999999999987776 5999875
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=6.3e-35 Score=274.69 Aligned_cols=312 Identities=22% Similarity=0.220 Sum_probs=251.7
Q ss_pred eeEEEEecCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201 9 CKAVVCWGLGEP-----LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 9 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
|||+++++++.. ++.++++.|++.+++|+|++.++++|++|++ +.+..+...+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999988753 6667788888899999999999999999999 7776554456778999999999999999999
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+++||+|+..... ..+ |+|++|+.++.+.++++|++
T Consensus 81 ~~~Gd~V~~~~~~--------------------------~~~------------------g~~~~~~~v~~~~~~~ip~~ 116 (336)
T cd08252 81 FKVGDEVYYAGDI--------------------------TRP------------------GSNAEYQLVDERIVGHKPKS 116 (336)
T ss_pred CCCCCEEEEcCCC--------------------------CCC------------------ccceEEEEEchHHeeeCCCC
Confidence 9999999843210 011 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCC-----CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG 235 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg 235 (375)
++.++++.+++.+.+||.++.+.+++++ |++|+|+|+ |++|++++++|+..| + +|+++++++++.++++++|
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g 195 (336)
T cd08252 117 LSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELG 195 (336)
T ss_pred CCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcC
Confidence 9999999999999999998877788887 999999986 999999999999999 7 9999999999999999999
Q ss_pred CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL 315 (375)
Q Consensus 236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 315 (375)
++.+++..+ ++.+.++.. .+.++|++||++++...+..++++++++ |+++.+|... ..++...+..+++++
T Consensus 196 ~~~~~~~~~----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~ 266 (336)
T cd08252 196 ADHVINHHQ----DLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ---EPLDLGPLKSKSASF 266 (336)
T ss_pred CcEEEeCCc----cHHHHHHhh-CCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC---CcccchhhhcccceE
Confidence 988887653 455566644 3348999999999766889999999997 9999998552 345555554578888
Q ss_pred EEEeeccc-c-C-------CCCHHHHHHHHHcCCCCCCcc-eeeEeecccHHHHHHHHcCCCee-EEEEe
Q 017201 316 KGTTFGGI-K-T-------KSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKAIQLLKQPDCV-KVLIT 374 (375)
Q Consensus 316 ~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 374 (375)
.+...... . . ...+.++++++.++.+++... ....++++++++|++.+.+++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 87554321 0 0 123667888999999885311 12357999999999999887764 88764
No 104
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.9e-34 Score=267.50 Aligned_cols=310 Identities=25% Similarity=0.333 Sum_probs=256.2
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++.+.+.+ +++++.+.|++.+++++||+.++++|++|++ ..+..+. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 789999875543 7777888888899999999999999999998 7765532 34678999999999999999998999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+.... + |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~-----------------------------~------------------g~~~~~~~~~~~~~~~~p~~~~ 113 (323)
T cd05276 81 VGDRVCALLA-----------------------------G------------------GGYAEYVVVPAGQLLPVPEGLS 113 (323)
T ss_pred CCCEEEEecC-----------------------------C------------------CceeEEEEcCHHHhccCCCCCC
Confidence 9999984321 1 3899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.++..+.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++..
T Consensus 114 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (323)
T cd05276 114 LVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYR 192 (323)
T ss_pred HHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC
Confidence 99999999999999998877788999999999997 9999999999999999 899999999999999889988888776
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
. .++.+.+.+...+.++|++||+.|+. .+..+++++.++ |+++.+|..+.....++...++.+++++.++.....
T Consensus 193 ~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T cd05276 193 T---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSR 267 (323)
T ss_pred c---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccch
Confidence 5 56777777777767899999999987 578899999997 999999876543345566666568999988765432
Q ss_pred cCC-------CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 324 KTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 324 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
... ..+.++++++.++++++ ..++.|++++++++++.+.++.. .|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 268 SLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 111 12456778888888874 36778999999999999987665 47663
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=8.5e-34 Score=265.67 Aligned_cols=312 Identities=20% Similarity=0.232 Sum_probs=245.4
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++++++. .+++++.|.|+|+++||+|++.++++|++|+. +.|..+. +.+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998775 48899999999999999999999999999998 7775432 34578899999999998 6777899
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..... + +... .|+|++|++++.+.++++|++++
T Consensus 79 ~Gd~V~~~~~~--------------~---------~~~~------------------~g~~~~~~~v~~~~~~~lp~~~~ 117 (324)
T cd08288 79 PGDRVVLTGWG--------------V---------GERH------------------WGGYAQRARVKADWLVPLPEGLS 117 (324)
T ss_pred CCCEEEECCcc--------------C---------CCCC------------------CCcceeEEEEchHHeeeCCCCCC
Confidence 99999864210 0 1011 24899999999999999999999
Q ss_pred cccccccccchhhhhhhhh--hhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201 165 PSDASFLSCGFTTGYGAAW--KEAKVE-KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~ 240 (375)
.++++.+++.+.+|+.++. +..+.. +|++|||+|+ |++|++++|+|+.+|+ +|++++.++++.++++++|++.++
T Consensus 118 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 196 (324)
T cd08288 118 ARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEII 196 (324)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEE
Confidence 9999999999999887643 224455 6789999998 9999999999999999 899999999999999999999988
Q ss_pred CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF 320 (375)
Q Consensus 241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (375)
++++ ....++.+..+ ++|.++|++++. .+..++..++.+ |+++.+|........+++..++.+++++.+...
T Consensus 197 ~~~~-----~~~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 197 DRAE-----LSEPGRPLQKE-RWAGAVDTVGGH-TLANVLAQTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred Ecch-----hhHhhhhhccC-cccEEEECCcHH-HHHHHHHHhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEe
Confidence 8764 22245555555 589999999975 677888999987 999999875322333555556568999988753
Q ss_pred ccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 321 GGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 321 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
..... ...+..+.+++..+.+++ +.+.++++++++|++.+++++. .|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 32211 123445666777887753 3679999999999999988877 4998864
No 106
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=8.4e-34 Score=264.07 Aligned_cols=310 Identities=27% Similarity=0.327 Sum_probs=253.8
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201 10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG 86 (375)
Q Consensus 10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G 86 (375)
||+....++. .+.+++.+.+++.+++|+|+|.++++|++|++ ..+..+. .+|.++|||++|+|+.+|+++..+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 4566655554 36677777777889999999999999999998 7765542 457789999999999999999999999
Q ss_pred CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201 87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 166 (375)
Q Consensus 87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~ 166 (375)
|+|+... . .|+|++|+.++.+.++++|++++..
T Consensus 80 ~~V~~~~-----------------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 80 DRVAYAG-----------------------------P------------------PGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred CEEEEec-----------------------------C------------------CCceeEEEEecHHHceeCCCCCCHH
Confidence 9998432 0 1389999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~ 245 (375)
+++.+++.+.+|++++.+..++++|++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 190 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD- 190 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc-
Confidence 999999899999998877889999999999997 9999999999999999 8999999999999999999988887765
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT 325 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (375)
.++.+.++.++.++++|++||++++. .+..++++++++ |+++.+|........+++..+..+++++.+.....+..
T Consensus 191 --~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd05286 191 --EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIA 266 (320)
T ss_pred --hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcC
Confidence 67888888888777899999999986 888999999998 99999986543223445555546888887654332211
Q ss_pred C-----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 326 K-----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 326 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
. ..+..+++++.++.+++. ..+.|++++++++++.+.+++. .|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 267 TREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1 224567888888888754 5678999999999999987766 4888763
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=8.2e-34 Score=264.88 Aligned_cols=316 Identities=25% Similarity=0.351 Sum_probs=257.1
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
||++++..++.+ +.++++|.|.+.+++++|++.++++|++|++ ..|..+ ....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888776543 8888999999999999999999999999998 777553 245788999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+.. +. ...|++++|+.++.+.++++|++++
T Consensus 81 ~Gd~v~~~~~~-------------------------~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~ 118 (325)
T cd08253 81 VGDRVWLTNLG-------------------------WG-----------------RRQGTAAEYVVVPADQLVPLPDGVS 118 (325)
T ss_pred CCCEEEEeccc-------------------------cC-----------------CCCcceeeEEEecHHHcEeCCCCCC
Confidence 99999865421 00 0014899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++..
T Consensus 119 ~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (325)
T cd08253 119 FEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR 197 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence 99999999999999998877789999999999987 9999999999999998 899999999999999999998888776
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
. .++...+.++..++++|+++|+++.. .....++++++. |+++.++... ....++...++.++.++.+......
T Consensus 198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 198 A---EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTA 271 (325)
T ss_pred C---cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhc
Confidence 5 56777788777767899999999987 678889999997 9999998654 3344555554557787776653211
Q ss_pred c---CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 K---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
. ....+..+.+++.++.+++ .....+++++++++++.+.+++. .|+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 0 0112445667777888764 35678999999999999987766 5988864
No 108
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=7.3e-34 Score=258.68 Aligned_cols=268 Identities=33% Similarity=0.501 Sum_probs=223.3
Q ss_pred eEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccc
Q 017201 35 EVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL 112 (375)
Q Consensus 35 ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~ 112 (375)
||+|++.++++|++|++ +.+..+ ...+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|++|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 68999999999999999 877664 345688999999999999999999999999999999999999999997 776
Q ss_pred ccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCC
Q 017201 113 KYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS 192 (375)
Q Consensus 113 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 192 (375)
..... +...+ |+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+++|+
T Consensus 77 ~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~ 136 (271)
T cd05188 77 GGGIL--GEGLD------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGD 136 (271)
T ss_pred CCCEe--ccccC------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCC
Confidence 65442 33333 49999999999999999999999999999999999999887777779999
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~ 272 (375)
+|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+ .+..+.+. ...+.++|++||+++.
T Consensus 137 ~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 137 TVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred EEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCC
Confidence 99999996699999999999997 9999999999999999999988888766 56666665 5555689999999998
Q ss_pred hhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHH
Q 017201 273 PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK 335 (375)
Q Consensus 273 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (375)
...++.++++++++ |+++.++.............++.+++++.++.... ..++++++++
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 44788999999997 99999987754222222444566899999886442 3456666654
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-33 Score=264.49 Aligned_cols=310 Identities=28% Similarity=0.340 Sum_probs=248.6
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 9 CKAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 9 ~~a~~~~~~~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
|||+++.+++ +.+++++.|.|++.+++|+||+.++++|++|+. ..+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999988 469999999999999999999999999999998 7766543334778999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|+..+.. ..+ |+|++|+.++.+.++++|++++.
T Consensus 81 Gd~V~~~~~~--------------------------~~~------------------~~~~s~~~~~~~~~~~ip~~~~~ 116 (325)
T cd08271 81 GDRVAYHASL--------------------------ARG------------------GSFAEYTVVDARAVLPLPDSLSF 116 (325)
T ss_pred CCEEEeccCC--------------------------CCC------------------ccceeEEEeCHHHeEECCCCCCH
Confidence 9999865311 111 38999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~ 244 (375)
.+++.+++.+.+|++++.+.+++++|++|+|+|+ |++|++++++|+..|+ +|+.+. ++++.+.++++|++.+++...
T Consensus 117 ~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~ 194 (325)
T cd08271 117 EEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND 194 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC
Confidence 9999999999999998878889999999999998 8999999999999999 788776 678888888899988887766
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI- 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 323 (375)
.++.+.++++..++++|++++++++. ....+++++++. |+++.++...... +...+ .+++.+....+...
T Consensus 195 ---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~ 265 (325)
T cd08271 195 ---EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS---PDPPF-TRALSVHEVALGAAH 265 (325)
T ss_pred ---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc---chhHH-hhcceEEEEEecccc
Confidence 56777888887777899999999987 557789999997 9999987543211 11112 13333333222111
Q ss_pred c---------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 K---------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
. ..+.+..+++++.++.+++. ..+.++++++.++++.+.++.. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 266 DHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 0 11224568888888988743 5678999999999999987766 4988864
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.1e-33 Score=266.22 Aligned_cols=315 Identities=22% Similarity=0.214 Sum_probs=237.1
Q ss_pred eEEEEecCCCCeEEEEeecCCC---CCCeEEEEEeeeecCCCccc-ccCCCCCCC-CCcccCcceeEEEEEeCCCCC-CC
Q 017201 10 KAVVCWGLGEPLKVEEIQVEPP---KSTEVRVKMLYASVCHTDIL-CSEGFPAPL-YPRVLGHEGVGVVESAGDEVK-EV 83 (375)
Q Consensus 10 ~a~~~~~~~~~l~~~~~~~p~~---~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~-~p~i~G~e~~G~Vv~vG~~v~-~~ 83 (375)
||+++.+.+.++++++++.|.| ++++|+||+.++++|++|+. +.+...... .|.++|+|++|+|+++|++++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6889999888888888887766 89999999999999999998 654322222 377899999999999999998 89
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc----cEEEc
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN----YVVKV 159 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~l 159 (375)
++||+|+......|+ +.|+|++|++++.+ .++++
T Consensus 82 ~~Gd~V~~~~~~~~~------------------------------------------~~g~~~~~~~v~~~~~~~~~~~l 119 (352)
T cd08247 82 KVGDEVCGIYPHPYG------------------------------------------GQGTLSQYLLVDPKKDKKSITRK 119 (352)
T ss_pred CCCCEEEEeecCCCC------------------------------------------CCceeeEEEEEccccccceeEEC
Confidence 999999865432210 12489999999987 79999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCC
Q 017201 160 DPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGM 236 (375)
Q Consensus 160 p~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~ 236 (375)
|+++++.+++.+++++.|||+++.... ++++|++|||+|+ |.+|++++++|+..|.. +|+++. ++++.+.++++|+
T Consensus 120 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~ 198 (352)
T cd08247 120 PENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGA 198 (352)
T ss_pred CCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCC
Confidence 999999999999999999999886666 7999999999988 89999999999988543 566665 4555667888999
Q ss_pred cEEeCCCCCCccc---HHHHHHhh-cCCCCccEEEEccCChhhHHHHHHhcc---cCCeEEEEEccCCCcccc-------
Q 017201 237 TDFINPDDEPNKS---ISELVKGI-THGMGVDYCFECTGVPSLLSEALETTK---VGKGKVIVIGVGVDAMVP------- 302 (375)
Q Consensus 237 ~~v~~~~~~~~~~---~~~~i~~~-~~~~g~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~~~------- 302 (375)
+.+++..+ .+ +...+.+. ++++++|++||++|+......++++++ ++ |+++.++........
T Consensus 199 ~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~ 274 (352)
T cd08247 199 DHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSW 274 (352)
T ss_pred CEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhc
Confidence 98888765 33 44444444 435689999999998557889999999 97 999987422111100
Q ss_pred ----chHHHhh----cCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 303 ----LNVIALA----CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 303 ----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
+....+. .+...+....... ....+..+++++.++.+++ ...+.++++++++|++.+++++. .|+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 350 (352)
T cd08247 275 DNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVI 350 (352)
T ss_pred cccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence 1111111 1222222211110 1134677888999998874 36788999999999999988776 59988
Q ss_pred eC
Q 017201 374 TI 375 (375)
Q Consensus 374 ~~ 375 (375)
++
T Consensus 351 ~~ 352 (352)
T cd08247 351 KV 352 (352)
T ss_pred eC
Confidence 64
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-33 Score=263.62 Aligned_cols=311 Identities=25% Similarity=0.303 Sum_probs=252.9
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++.+++.+ +++++.+.|++.+++|+|++.++++|++|++ ..+... ....|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999887765 8888888888899999999999999999998 766543 234578899999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+.... |+. ...|+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~-------------------------~~~-----------------~~~g~~~~~~~v~~~~~~~~p~~~~ 118 (326)
T cd08272 81 VGDEVYGCAG-------------------------GLG-----------------GLQGSLAEYAVVDARLLALKPANLS 118 (326)
T ss_pred CCCEEEEccC-------------------------CcC-----------------CCCCceeEEEEecHHHcccCCCCCC
Confidence 9999985431 111 0124899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
..+++.+++.+.+||+++.+..++++|++++|+|+ |++|++++++|+..|+ +|++++++ ++.+.++++|++.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~ 196 (326)
T cd08272 119 MREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYR 196 (326)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecc
Confidence 99999999999999998878889999999999986 9999999999999999 89999888 888999999998888776
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc-
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG- 322 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (375)
. . +...+.+++.+.++|+++|++++. .+..+++++++. |+++.++... ...+. ....+++++.+.....
T Consensus 197 ~---~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~ 266 (326)
T cd08272 197 E---T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGGA--THDLA--PLSFRNATYSGVFTLLP 266 (326)
T ss_pred h---h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecCC--ccchh--hHhhhcceEEEEEcccc
Confidence 5 5 777888888877899999999986 688899999997 9999997553 22222 2234778777765321
Q ss_pred -cc------CCCCHHHHHHHHHcCCCCCCccee-eEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 323 -IK------TKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 323 -~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.. ....+..+++++.++.+++ .++ +.+++++++++++.+.+++. .|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 10 0124566888888888764 334 78999999999999987665 5998875
No 112
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.9e-34 Score=270.88 Aligned_cols=308 Identities=23% Similarity=0.237 Sum_probs=239.1
Q ss_pred eeEEEEecCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCC---------------CCCCCcccCcc
Q 017201 9 CKAVVCWGLGEP---LKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFP---------------APLYPRVLGHE 68 (375)
Q Consensus 9 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~---------------~~~~p~i~G~e 68 (375)
|||+++++++++ +++++.++|+| +++||+|++.++++|++|++ ..|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 788998887765 89999999999 49999999999999999998 766421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeee
Q 017201 69 GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148 (375)
Q Consensus 69 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 148 (375)
++|+|+++|++++.+++||+|+..+.. . +.|+|++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------~------------------~~g~~~~~ 116 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------W------------------SQGTHAEY 116 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------C------------------CCccceeE
Confidence 999999999999999999999854321 0 12499999
Q ss_pred EEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201 149 MVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK----GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK 223 (375)
Q Consensus 149 ~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~ 223 (375)
+.++.+.++++|+++++++++.+++.+.|||+++.+.+.+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++.+
T Consensus 117 ~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~ 195 (350)
T cd08248 117 VVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCS 195 (350)
T ss_pred EEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeC
Confidence 999999999999999999999999999999998777666654 999999997 9999999999999999 7888875
Q ss_pred ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC---cc
Q 017201 224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD---AM 300 (375)
Q Consensus 224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~---~~ 300 (375)
+ ++.+.++++|.+.+++..+ .++...+.. ..++|++||++|+. ....++++++++ |+++.+|.... ..
T Consensus 196 ~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 196 T-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred c-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence 4 6778888999988887765 455555443 34799999999987 889999999998 99999985431 11
Q ss_pred ccc---------hHHHhhc----CCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC
Q 017201 301 VPL---------NVIALAC----GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367 (375)
Q Consensus 301 ~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 367 (375)
..+ ....+.. +...+..... ......+.++++++.++.+++ .+++.+++++++++++.+.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~ 342 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFF--SPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGH 342 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEE--CCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCC
Confidence 011 1110000 1111111100 112345788999999998874 3678899999999999998776
Q ss_pred e-eEEEEe
Q 017201 368 C-VKVLIT 374 (375)
Q Consensus 368 ~-~kvvi~ 374 (375)
. .|++++
T Consensus 343 ~~~~vv~~ 350 (350)
T cd08248 343 ARGKTVIK 350 (350)
T ss_pred CceEEEeC
Confidence 5 488763
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=8.4e-33 Score=258.24 Aligned_cols=312 Identities=24% Similarity=0.331 Sum_probs=255.8
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+.+...+.+ +++++.+.|++++++++|++.++++|++|+. ..+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888776654 6677777777899999999999999999998 7765532 34578999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+... .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~-----------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~~ 113 (325)
T TIGR02824 81 VGDRVCALV-----------------------------AG------------------GGYAEYVAVPAGQVLPVPEGLS 113 (325)
T ss_pred CCCEEEEcc-----------------------------CC------------------CcceeEEEecHHHcEeCCCCCC
Confidence 999998431 11 3899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.++.++.+||.++.+..++++|++|+|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++..
T Consensus 114 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (325)
T TIGR02824 114 LVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR 192 (325)
T ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC
Confidence 99999999999999998778889999999999997 9999999999999999 899999999999988889988887766
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
. .++...++....++++|++++++++. .+..++++++++ |+++.+|........+++..+..+++++.+......
T Consensus 193 ~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T TIGR02824 193 E---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRAR 267 (325)
T ss_pred c---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhc
Confidence 5 56777788777766899999999976 778899999997 999999865432235666666569999998874431
Q ss_pred cC-------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 KT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
.. ...+.+++++++++.+++ ..++.+++++++++++.+.+++. .|+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 268 PVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred chhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 11 012345677888888764 36778999999999999887766 4888764
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=5.8e-33 Score=260.57 Aligned_cols=304 Identities=24% Similarity=0.254 Sum_probs=240.7
Q ss_pred eeEEEEecCC------CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCC
Q 017201 9 CKAVVCWGLG------EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGD 78 (375)
Q Consensus 9 ~~a~~~~~~~------~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~ 78 (375)
++|+++...+ +.+.+++++.|++.+++|+||+.++++|+.|.. ..+.. ++...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 4566665433 238899999999999999999999999998765 43321 1112356789999999999996
Q ss_pred CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec-ccEE
Q 017201 79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVV 157 (375)
Q Consensus 79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~ 157 (375)
+ .+++||+|+.. ++|++|+.++. +.++
T Consensus 82 ~--~~~~Gd~V~~~--------------------------------------------------~~~~~~~~v~~~~~~~ 109 (329)
T cd05288 82 P--DFKVGDLVSGF--------------------------------------------------LGWQEYAVVDGASGLR 109 (329)
T ss_pred C--CCCCCCEEecc--------------------------------------------------cceEEEEEecchhhcE
Confidence 4 79999999732 27999999999 9999
Q ss_pred EcCCCCC--cccccc-cccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201 158 KVDPSID--PSDASF-LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 233 (375)
Q Consensus 158 ~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~ 233 (375)
++|++++ +.++++ +++++.|||+++...+.+.+|++|||+|+ |++|++++++|+..|+ +|+++++++++.+.+++
T Consensus 110 ~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~ 188 (329)
T cd05288 110 KLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVE 188 (329)
T ss_pred ECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 9999985 445555 88899999998877788999999999986 9999999999999999 89999999999999988
Q ss_pred -cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-----cchHHH
Q 017201 234 -FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-----PLNVIA 307 (375)
Q Consensus 234 -lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-----~~~~~~ 307 (375)
+|++.+++.++ .++.+.+.++.+ .++|++||++|+. .+..++++++++ |+++.+|....... .++...
T Consensus 189 ~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 189 ELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred hcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 99998888876 567777877775 5899999999985 889999999997 99999986543211 123444
Q ss_pred hhcCCceEEEEeeccccC--CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 308 LACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
++.+++++.+........ ...+.++++++.++.+++.+ ...+++++++++++.+.+++. .|+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 556888888876432211 13466788899999988653 446899999999999987765 47764
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-32 Score=254.33 Aligned_cols=316 Identities=26% Similarity=0.373 Sum_probs=253.2
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
|||+++...+. .+++++.+.|.+++++++|++.++++|+.|+. ..+.... ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 67888876554 37777888888899999999999999999998 7665432 34578899999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+... ... .|++++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~------------------------~~~------------------~g~~~~~~~~~~~~~~~~p~~~~ 118 (328)
T cd08268 81 VGDRVSVIPAAD------------------------LGQ------------------YGTYAEYALVPAAAVVKLPDGLS 118 (328)
T ss_pred CCCEEEeccccc------------------------cCC------------------CccceEEEEechHhcEeCCCCCC
Confidence 999998654211 111 14899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.+++.+.+||.++.....+.++++|+|+|+ |.+|++++++++..|+ +|+.+++++++.+.++++|.+.+++.+
T Consensus 119 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (328)
T cd08268 119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD 197 (328)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC
Confidence 99999999999999998877888999999999998 9999999999999999 899999999999999889988888776
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
. ..+.+.+.+...++++|+++++.++. ....++++++++ |+++.+|........++....+.+++++.+......
T Consensus 198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (328)
T cd08268 198 E---EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEI 272 (328)
T ss_pred C---ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccc
Confidence 5 56777787777777899999999985 788999999997 999999865432233444434558888888764422
Q ss_pred c-CCCC----HHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 324 K-TKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 324 ~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
. .... +..+.+++.++.+.+ +....++++++.++++.+.+++. .|+|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 273 TLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 1 1112 334455566777764 35678999999999999987766 488876
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-32 Score=256.59 Aligned_cols=305 Identities=26% Similarity=0.332 Sum_probs=238.0
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~ 84 (375)
.||+++...+. .+++++.+.|.|.+++|+|++.++++|++|+. +.+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 37888887664 38888889999999999999999999999998 7766532 34688999999999999999999999
Q ss_pred CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201 85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164 (375)
Q Consensus 85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~ 164 (375)
+||+|+..+. + |+|++|++++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~-----------------------------~------------------g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 81 VGDRVAALTR-----------------------------V------------------GGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCCEEEEeCC-----------------------------C------------------cceeeEEEechHHeEECCCCCC
Confidence 9999985421 1 3899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
+.+++.+++++.+||+++.+..++.+|++|+|+|+ |++|++++++|+..|+ +|+++++ +++.+.++++|+.. ++..
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999998877788999999999997 9999999999999999 8999987 88888899999764 3443
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc--cchHH----------Hhhc
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV--PLNVI----------ALAC 310 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~--~~~~~----------~~~~ 310 (375)
. .++... .... .++|+++|++++. .+..++++++++ |+++.+|.... ... .+++. ....
T Consensus 191 ~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T cd08273 191 T---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLP 262 (331)
T ss_pred C---cchhhh--hccC-CCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhccee
Confidence 3 334333 3333 3799999999987 588999999997 99999986643 111 11111 0111
Q ss_pred CCceEEEEeecccc------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 311 GGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 311 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
....+.+....... ..+.+..+++++.++.+++ .+.+.+++++++++++.+.+++. .|+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 263 TGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 22222222211110 1235677889999998874 36778999999999999987766 47765
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.4e-32 Score=251.73 Aligned_cols=291 Identities=23% Similarity=0.330 Sum_probs=236.6
Q ss_pred cCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhc
Q 017201 28 VEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTS 105 (375)
Q Consensus 28 ~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~ 105 (375)
.|++.+++++|++.++++|++|+. +.+.++. +.+|.++|+|++|+|+++|+++..+++||+|+......
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~--------- 72 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGES--------- 72 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCC---------
Confidence 577889999999999999999998 7776542 45688999999999999999999999999998543110
Q ss_pred cCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhh
Q 017201 106 EMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185 (375)
Q Consensus 106 ~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~ 185 (375)
.|+|++|+.++.+.++++|+++++.+++.++..+.+||+++ +.
T Consensus 73 ------------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~ 115 (303)
T cd08251 73 ------------------------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-AR 115 (303)
T ss_pred ------------------------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-Hh
Confidence 13899999999999999999999999999999999999986 57
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 264 (375)
Q Consensus 186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d 264 (375)
.++++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++.+.++++|++.+++... .++.+.+.+++++.++|
T Consensus 116 ~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 116 AGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVD 191 (303)
T ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCce
Confidence 89999999999976 9999999999999999 8999999999999999999999988776 67888888888877899
Q ss_pred EEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc------CCCCHHHHHHHHH
Q 017201 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK------TKSDLPTLLDKCK 337 (375)
Q Consensus 265 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 337 (375)
+++|++++. ....+++++++. |+++.+|.... ....++...+. +++.+....+.... ..+.+.++++++.
T Consensus 192 ~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 192 VVINTLSGE-AIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred EEEECCcHH-HHHHHHHHhccC-cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999765 788999999997 99999986542 22334444443 44544443322110 0123566788888
Q ss_pred cCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 338 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
++.+++. ..+.+++++++++++.+.+++. .|+++
T Consensus 269 ~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 9988743 5678999999999999987766 47764
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.7e-31 Score=248.96 Aligned_cols=310 Identities=29% Similarity=0.435 Sum_probs=251.2
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCC-CCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 017201 9 CKAVVCWGLGE--PLKVEEIQVEPPK-STEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEV 83 (375)
Q Consensus 9 ~~a~~~~~~~~--~l~~~~~~~p~~~-~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~ 83 (375)
|+|+++..++. .+.+++.+ |.+. +++++|++.++++|++|+. +.+.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 68899875443 36777777 6665 5999999999999999998 7765532 3346689999999999999999899
Q ss_pred CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201 84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI 163 (375)
Q Consensus 84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~ 163 (375)
++||+|+..+. .|++++|+.++.+.++++|+++
T Consensus 80 ~~G~~V~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~ip~~~ 112 (323)
T cd08241 80 KVGDRVVALTG-----------------------------------------------QGGFAEEVVVPAAAVFPLPDGL 112 (323)
T ss_pred CCCCEEEEecC-----------------------------------------------CceeEEEEEcCHHHceeCCCCC
Confidence 99999985420 1389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242 (375)
Q Consensus 164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~ 242 (375)
++.+++.+...+.+|+.++.+...+++|++|+|+|+ |++|++++++|+..|+ +|+.+++++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd08241 113 SFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191 (323)
T ss_pred CHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeec
Confidence 999998888899999998776788999999999998 9999999999999999 89999999999999999998888877
Q ss_pred CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 322 (375)
Q Consensus 243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
.. .++.+.+...+++.++|.++|++|+. ....++++++++ |+++.+|........+++.....+++++.+.....
T Consensus 192 ~~---~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd08241 192 RD---PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGA 266 (323)
T ss_pred CC---ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEeccc
Confidence 65 67888888888777899999999985 788999999997 99999986543211233433445888888876543
Q ss_pred ccC------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201 323 IKT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 374 (375)
Q Consensus 323 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~ 374 (375)
+.. ...+..+++++.++.+++ ..+..|+++++.++++.+.+++. .|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 267 YARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 311 124567888898998864 36778999999999999887666 487763
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=6.2e-32 Score=250.55 Aligned_cols=301 Identities=23% Similarity=0.268 Sum_probs=241.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 017201 9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKE 82 (375)
Q Consensus 9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~ 82 (375)
|+|+++..++.. +.+++.+.|+++++||+|++.++++|++|+. +.+... ...+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678898877643 5667778888899999999999999999998 776542 2345789999999999999999999
Q ss_pred CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201 83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 162 (375)
Q Consensus 83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~ 162 (375)
+++||+|+..+.. .. .|+|++|+.++.+.++++|++
T Consensus 81 ~~~G~~V~~~~~~--------------------------~~------------------~g~~~~~~~~~~~~~~~~p~~ 116 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------TR------------------GGAYAEYVVVPADELALKPAN 116 (309)
T ss_pred CCCCCEEEEccCC--------------------------CC------------------CCcceeEEEecHHHhccCCCC
Confidence 9999999855311 00 138999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~ 241 (375)
+++.+++.+++.+.+|++++.+...+.+|++|||+|+ |.+|++++++++..|+ +|+++++++ +.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~ 194 (309)
T cd05289 117 LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVID 194 (309)
T ss_pred CCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEe
Confidence 9999999999999999998877677999999999997 9999999999999999 888888777 888888899888877
Q ss_pred CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321 (375)
Q Consensus 242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
... .++.+ ...+.++|+++|++++. ....++++++++ |+++.+|.... ... ....+++++....+.
T Consensus 195 ~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 195 YTK---GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPP-AEQ----AAKRRGVRAGFVFVE 260 (309)
T ss_pred CCC---Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCc-chh----hhhhccceEEEEEec
Confidence 655 34433 34455799999999987 789999999997 99999986542 111 223356666655432
Q ss_pred cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
.. ...+..++++++++.+++ +.++.|++++++++++.+.+++. .|+|+
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 11 356788899999998763 46789999999999999987765 37663
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-30 Score=245.38 Aligned_cols=309 Identities=26% Similarity=0.338 Sum_probs=244.4
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201 10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKE 85 (375)
Q Consensus 10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~ 85 (375)
||+++...+. .+.+++.+.|++.+++|+|++.++++|++|+. +.+..+ .+..|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566655443 47777888888899999999999999999998 777553 2355778999999999999999999999
Q ss_pred CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201 86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 165 (375)
Q Consensus 86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~ 165 (375)
||+|+.... + |+|++|+.++.+.++++|+++++
T Consensus 81 G~~V~~~~~-----------------------------~------------------~~~~~~~~~~~~~~~~ip~~~~~ 113 (337)
T cd08275 81 GDRVMGLTR-----------------------------F------------------GGYAEVVNVPADQVFPLPDGMSF 113 (337)
T ss_pred CCEEEEecC-----------------------------C------------------CeeeeEEEecHHHeEECCCCCCH
Confidence 999985421 1 38999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201 166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~ 243 (375)
.+++.+++.+.+||+++.+..++++|++|+|+|+ |++|++++++|+.. +. .++.. .++++.++++++|++.+++..
T Consensus 114 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~ 191 (337)
T cd08275 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYR 191 (337)
T ss_pred HHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCC
Confidence 9999999999999999878889999999999998 99999999999998 43 33322 245577888889998888877
Q ss_pred CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc---------------cchHHH
Q 017201 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV---------------PLNVIA 307 (375)
Q Consensus 244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~---------------~~~~~~ 307 (375)
. .++...+++.++ .++|+++|++|+. ....++++++++ |+++.+|.... ... .+++..
T Consensus 192 ~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 192 T---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred C---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 6 677778887775 4899999999986 778999999997 99999986542 111 122234
Q ss_pred hhcCCceEEEEeeccccCC-----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 308 LACGGRTLKGTTFGGIKTK-----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
++.+++++.++........ ..+.++++++.++.+++. ....|++++++++++.+.+++. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 4558888888765422111 125668888888887743 5678999999999999987766 4998864
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1e-30 Score=239.93 Aligned_cols=281 Identities=23% Similarity=0.280 Sum_probs=231.1
Q ss_pred CeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccc
Q 017201 34 TEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL 112 (375)
Q Consensus 34 ~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~ 112 (375)
+||+||+.++++|++|++ ..+.. +.+|.++|||++|+|+++|+++..+++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999 77654 34578999999999999999999999999998432
Q ss_pred ccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCC
Q 017201 113 KYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS 192 (375)
Q Consensus 113 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~ 192 (375)
.|+|++|+.++.+.++++|+++++.+++.+++++.+||.++.+...+++|+
T Consensus 60 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 110 (293)
T cd05195 60 -----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGE 110 (293)
T ss_pred -----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCC
Confidence 138999999999999999999999999999899999999887778999999
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC--CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
+|+|+|+ |++|++++++|+..|+ +|+++++++++.+.+++++ ++.+++..+ .++.+.+++.+.++++|+++|+
T Consensus 111 ~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 186 (293)
T cd05195 111 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNS 186 (293)
T ss_pred EEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeC
Confidence 9999976 9999999999999999 8999999999999998888 677887765 5788888888877789999999
Q ss_pred cCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc--C----CCCHHHHHHHHHcCCCC
Q 017201 270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPTLLDKCKNKEFK 342 (375)
Q Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~ 342 (375)
+++. .++.++++++++ |+++.+|.... ....++...+. +++.+....+.... . ...+..+++++.+++++
T Consensus 187 ~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 187 LSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhc-cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 9987 889999999997 99999986543 11233333333 56666665443221 0 12356788888899877
Q ss_pred CCcceeeEeecccHHHHHHHHcCCCee-EEEE
Q 017201 343 LHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI 373 (375)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi 373 (375)
+..+..+++++++++++.+.+++.. |+|+
T Consensus 264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred --cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 4467789999999999999877664 7663
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.3e-30 Score=243.08 Aligned_cols=294 Identities=26% Similarity=0.274 Sum_probs=226.8
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCC
Q 017201 22 KVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGEC 97 (375)
Q Consensus 22 ~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 97 (375)
++++.+.|+++++||+|++.++++|++|++ +.|..+ ....|.++|||++|+|+++|+++.++++||+|+..+...
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 778889999999999999999999999999 776552 123467899999999999999999999999998543210
Q ss_pred CCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhh
Q 017201 98 KECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT 177 (375)
Q Consensus 98 ~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 177 (375)
. .|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 94 -------------------------~------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 130 (319)
T cd08267 94 -------------------------G------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT 130 (319)
T ss_pred -------------------------C------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence 0 138999999999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHh
Q 017201 178 GYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG 256 (375)
Q Consensus 178 a~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~ 256 (375)
||+++.....+++|++|+|+|+ |++|++++++|+..|+ +|++++++ ++.+.++++|++.+++... .++. +.
T Consensus 131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~ 202 (319)
T cd08267 131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---AL 202 (319)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hh
Confidence 9998877777999999999998 9999999999999999 89988865 8888889999988887665 3333 34
Q ss_pred hcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccCCC-ccccc---hHHHhhcCCceEEEEeeccccCCCCHHH
Q 017201 257 ITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVD-AMVPL---NVIALACGGRTLKGTTFGGIKTKSDLPT 331 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (375)
.+.+.++|++++++++. ......+..++++ |+++.+|.... ..... ...... ....+...... .....+.+
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 278 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGG-GGRRLKFFLAK--PNAEDLEQ 278 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhcc-ccceEEEEEec--CCHHHHHH
Confidence 45556899999999853 2334444458997 99999986643 11111 111111 12222222111 11456788
Q ss_pred HHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEE
Q 017201 332 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI 373 (375)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi 373 (375)
+++++.++++++ ..++.|++++++++++.+.+++.. |+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 899999998874 467899999999999999876653 7663
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=4.1e-30 Score=235.66 Aligned_cols=276 Identities=22% Similarity=0.310 Sum_probs=226.2
Q ss_pred EEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccccccc
Q 017201 38 VKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI 116 (375)
Q Consensus 38 V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~ 116 (375)
||+.++++|++|++ ..+.++ .|.++|||++|+|+++|++++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 78999999999999 777543 357899999999999999999999999998432
Q ss_pred ccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEE
Q 017201 117 ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV 196 (375)
Q Consensus 117 ~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI 196 (375)
.|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|+|
T Consensus 56 -------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv 110 (288)
T smart00829 56 -------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLI 110 (288)
T ss_pred -------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 1389999999999999999999999999999999999998777788999999999
Q ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh
Q 017201 197 LGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 273 (375)
Q Consensus 197 ~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~ 273 (375)
+|+ |++|++++++|+..|+ +|+++++++++.+.++++|+ +.+++..+ .++.+.+.+...++++|+++|++++.
T Consensus 111 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~ 186 (288)
T smart00829 111 HAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGE 186 (288)
T ss_pred ecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHH
Confidence 986 9999999999999999 89999999999999999998 67777765 56778888887777899999999864
Q ss_pred hhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc-----CCCCHHHHHHHHHcCCCCCCcce
Q 017201 274 SLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK-----TKSDLPTLLDKCKNKEFKLHQLL 347 (375)
Q Consensus 274 ~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 347 (375)
.+..++++++++ |+++.+|.... ....++...+ .+++++.+..+.... ....+..+++++.++++++. .
T Consensus 187 -~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 187 -FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPF-RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHhccCC-cEEEEEcCcCCccccccchhhh-cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 788999999997 99999986542 2233444443 367777665533211 11235667888888888753 4
Q ss_pred eeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 348 THHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 348 ~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
.+.|++++++++++.+..++. .|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 578999999999999988765 47663
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=2.9e-28 Score=223.26 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=200.8
Q ss_pred CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccC
Q 017201 54 EGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRG 133 (375)
Q Consensus 54 g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~ 133 (375)
|.++. ++|.++|||++|+|+++|++++.+++||+|+..
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 33444 488999999999999999999999999999743
Q ss_pred cceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Q 017201 134 QKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH 213 (375)
Q Consensus 134 ~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~ 213 (375)
+.|++|++++.+.++++|+++++.+++.+ +++.+||+++ ..+++++|++|||+|+|++|++++++|+++
T Consensus 52 ---------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~ 120 (277)
T cd08255 52 ---------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAA 120 (277)
T ss_pred ---------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence 16899999999999999999999999888 7899999986 478999999999998899999999999999
Q ss_pred CCCeEEEEcCChhhHHHhhhcC-CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEE
Q 017201 214 GAAKIIGIDKNPWKKEKGKAFG-MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 292 (375)
Q Consensus 214 G~~~V~~~~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~ 292 (375)
|+++|+++++++++.++++++| ++.+++..+ ....+.++|++||+++....+..++++++++ |+++.
T Consensus 121 g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~ 188 (277)
T cd08255 121 GAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVL 188 (277)
T ss_pred CCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEE
Confidence 9944999999999999999999 454443321 1124458999999998766889999999998 99999
Q ss_pred EccCCCccccchHHHhhcCCceEEEEeeccc---------cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHH
Q 017201 293 IGVGVDAMVPLNVIALACGGRTLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363 (375)
Q Consensus 293 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 363 (375)
+|..... .......+..+.+++.+...... ...+.+.++++++.++.+++ .+.+.+++++++++++.+
T Consensus 189 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~ 265 (277)
T cd08255 189 VGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLL 265 (277)
T ss_pred EeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHH
Confidence 9876533 22222334446667776654321 11256788999999999774 367789999999999999
Q ss_pred cCC--CeeEEEE
Q 017201 364 KQP--DCVKVLI 373 (375)
Q Consensus 364 ~~~--~~~kvvi 373 (375)
+++ ...|+++
T Consensus 266 ~~~~~~~~k~~~ 277 (277)
T cd08255 266 FEDPPECLKVVL 277 (277)
T ss_pred HcCCccceeeeC
Confidence 877 3458864
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=5.5e-29 Score=246.60 Aligned_cols=289 Identities=20% Similarity=0.257 Sum_probs=239.1
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCC-------cccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201 21 LKVEEIQVE---PPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYP-------RVLGHEGVGVVESAGDEVKEVKEGDIV 89 (375)
Q Consensus 21 l~~~~~~~p---~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p-------~i~G~e~~G~Vv~vG~~v~~~~~Gd~V 89 (375)
+++.+.|.. +..++.=+.-|-|+.||..|+. ..|..++...| .++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 566666544 2356777899999999999999 88887654333 4789999987 4559999
Q ss_pred EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc
Q 017201 90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS 169 (375)
Q Consensus 90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa 169 (375)
+ |+.... ++++.+.++.++++.+|.+.++++|+
T Consensus 1499 M-----------------------------~mvpAk------------------sLATt~l~~rd~lWevP~~WTleeAs 1531 (2376)
T KOG1202|consen 1499 M-----------------------------GMVPAK------------------SLATTVLASRDFLWEVPSKWTLEEAS 1531 (2376)
T ss_pred E-----------------------------Eeeehh------------------hhhhhhhcchhhhhhCCcccchhhcc
Confidence 8 333222 78999999999999999999999999
Q ss_pred ccccchhhhhhhhhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCC
Q 017201 170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDD 244 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~ 244 (375)
.+|+.|+|||++|+.++..++|+++||++ +|++|++||.+|.++|+ +|+.++.++||++++++ +....+-|+++
T Consensus 1532 tVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd 1610 (2376)
T KOG1202|consen 1532 TVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD 1610 (2376)
T ss_pred cCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc
Confidence 99999999999999999999999999994 59999999999999999 99999999999999875 44566778887
Q ss_pred CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccc
Q 017201 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (375)
.+|...+...+.|+|+|+|+++...+ .++.+++||+-. |+|..+|...- ...++.+..|+ |+++++|....++
T Consensus 1611 ---tsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfL-kNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1611 ---TSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFL-KNVSFHGILLDSV 1684 (2376)
T ss_pred ---ccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhc-CeeeeecceecccCCcchhhhhh-cccceeeeehhhh
Confidence 89999999999999999999999876 889999999997 99999997754 55566666666 9999999887655
Q ss_pred cCC--CCHHHHHHHHH----cCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201 324 KTK--SDLPTLLDKCK----NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375 (375)
Q Consensus 324 ~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 375 (375)
... +.+.++..+++ +|..+ |+.+++|+-.++++||+.|.+++++ ||||++
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~--PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVR--PLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCcee--ccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 322 23444555544 45555 6678899999999999999999995 999863
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=6.5e-27 Score=204.10 Aligned_cols=291 Identities=24% Similarity=0.244 Sum_probs=219.4
Q ss_pred EEeecC-CCCCCeEEEEEeeeecCCCcccccCCCCCC--CCCc-----ccCcceeEEEEEeCCCCCCCCCCCEEEeeccC
Q 017201 24 EEIQVE-PPKSTEVRVKMLYASVCHTDILCSEGFPAP--LYPR-----VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG 95 (375)
Q Consensus 24 ~~~~~p-~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~--~~p~-----i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 95 (375)
++++++ ++++++|+||.+|.+..|.---+.+..... -.|. |.| ..+|+|++. +..++++||.|....
T Consensus 27 ~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~S--~~~~~~~GD~v~g~~-- 101 (343)
T KOG1196|consen 27 TTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVIDS--GHPNYKKGDLVWGIV-- 101 (343)
T ss_pred eeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEec--CCCCCCcCceEEEec--
Confidence 344444 458999999999999876433221111110 0122 334 678999995 556899999997432
Q ss_pred CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCC--CCCccccc-c
Q 017201 96 ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDP--SIDPSDAS-F 170 (375)
Q Consensus 96 ~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~--~~~~~~aa-~ 170 (375)
+|.||.++++. ..+++|. +.++.... +
T Consensus 102 ------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~ 133 (343)
T KOG1196|consen 102 ------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGL 133 (343)
T ss_pred ------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhhc
Confidence 89999999774 4455543 34444433 3
Q ss_pred cccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcc
Q 017201 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNK 248 (375)
Q Consensus 171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~ 248 (375)
+.++..|||..+.+...+++|++|+|-|| |++|+++.|+|+.+|+ +|++.+.++||.++++ ++|.+.++|+.+ +.
T Consensus 134 lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~ 210 (343)
T KOG1196|consen 134 LGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ES 210 (343)
T ss_pred cCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--cc
Confidence 56789999999999999999999999988 9999999999999999 9999999999999987 579999999998 35
Q ss_pred cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccc-----hHHHhhcCCceEEEEeeccc
Q 017201 249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL-----NVIALACGGRTLKGTTFGGI 323 (375)
Q Consensus 249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 323 (375)
++.+++++..+. |+|+.||++|+. .+...+..++.. |+++.||+-+.+.... ++..++.|++++.+.....+
T Consensus 211 ~~~~aL~r~~P~-GIDiYfeNVGG~-~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 211 DLSAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred CHHHHHHHhCCC-cceEEEeccCcH-HHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 889999887766 999999999998 889999999997 9999999776321111 12335668999988654433
Q ss_pred --cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201 324 --KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI 375 (375)
Q Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~ 375 (375)
...+.+..+..++++|+|+.-.-+ .-.|++.+.||.-|.+++. +|.++.+
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEe
Confidence 123345678888999999865333 3369999999999999988 4877753
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=8.5e-24 Score=165.68 Aligned_cols=107 Identities=42% Similarity=0.683 Sum_probs=94.8
Q ss_pred CCeEEEEEeeeecCCCccc-ccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccc
Q 017201 33 STEVRVKMLYASVCHTDIL-CSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNL 110 (375)
Q Consensus 33 ~~ev~V~v~~~~i~~~D~~-~~g~-~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~ 110 (375)
|+||+|||.++|||++|++ +.+. .....+|.++|||++|+|+++|++++.|++||+|++.+...|+.|++|+.+.+++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 6899999999999999999 8883 4557889999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201 111 CLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV 159 (375)
Q Consensus 111 c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 159 (375)
|++.... |+..+| +|+||+.+++++++|+
T Consensus 81 c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL--GLGLDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET--TTSSTC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCEe--EcCCCC------------------cccCeEEEehHHEEEC
Confidence 9887764 666666 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.78 E-value=2.5e-18 Score=139.13 Aligned_cols=129 Identities=30% Similarity=0.471 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH
Q 017201 201 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 280 (375)
Q Consensus 201 ~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~ 280 (375)
++|++++|+||+.|+ +|++++++++|+++++++|++.++++++ .++.+.+++++++.++|+||||+|+++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 689999999999996 9999999999999999999999999988 779999999999889999999999888999999
Q ss_pred HhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHH
Q 017201 281 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK 337 (375)
Q Consensus 281 ~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (375)
++++++ |+++.+|.......+++...++.+++++.+++..+ .++++++++++.
T Consensus 77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 999998 99999999876788999999999999999998653 467888888775
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.53 E-value=3.7e-13 Score=127.63 Aligned_cols=165 Identities=22% Similarity=0.238 Sum_probs=133.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
..+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ + ..+.+ .+.|+||
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v------~~aDVVI 262 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV------KEGDIFV 262 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH------cCCCEEE
Confidence 4789999999999999999999999999 89999999999999999998533 1 11222 2589999
Q ss_pred EccCChhhHHHH-HHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHH--HHHHHHHcCCC-CC
Q 017201 268 ECTGVPSLLSEA-LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLP--TLLDKCKNKEF-KL 343 (375)
Q Consensus 268 d~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~ 343 (375)
+++|+...+... +.+++++ |+++.+|.. ...++...+..+++++.++.... ....++ ..++++.+|++ ++
T Consensus 263 ~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~--~~~~~~~g~aI~LLa~Grlvnl 336 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV--DRYELPDGRRIILLAEGRLVNL 336 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc--ceEEcCCcchhhhhhCcCCCCC
Confidence 999998778876 9999997 999999854 44678888888899998876321 122455 68999999999 88
Q ss_pred CcceeeE-----eecc-cHHHHHHHHcCCCe--eEEEEe
Q 017201 344 HQLLTHH-----VKLE-EIDKAIQLLKQPDC--VKVLIT 374 (375)
Q Consensus 344 ~~~~~~~-----~~~~-~~~~a~~~~~~~~~--~kvvi~ 374 (375)
...+++. ++|+ ++.++++.+.+++. .|+++.
T Consensus 337 ~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 337 GCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred cccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 8888888 8999 99999999987654 377654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.44 E-value=1.8e-12 Score=126.07 Aligned_cols=156 Identities=21% Similarity=0.275 Sum_probs=116.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCC----------cccHHHHHH
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEP----------NKSISELVK 255 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~----------~~~~~~~i~ 255 (375)
+..++++|+|+|+|++|++|++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ ..++.+...
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35689999999999999999999999999 89999999999999999999854 5543310 012333333
Q ss_pred hh-cCC-CCccEEEEccCChh-----h-HHHHHHhcccCCeEEEEEccCCCc--cccchHHHhhc-CCceEEEEeecccc
Q 017201 256 GI-THG-MGVDYCFECTGVPS-----L-LSEALETTKVGKGKVIVIGVGVDA--MVPLNVIALAC-GGRTLKGTTFGGIK 324 (375)
Q Consensus 256 ~~-~~~-~g~d~vid~~g~~~-----~-~~~~~~~l~~~~G~iv~~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~ 324 (375)
+. .+. +++|+||+|++.+. . .+++++.++++ |+++.+|...+. ..+++...++. +++++.|.+ ++
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~--n~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT--DL- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeC--CC-
Confidence 32 221 47999999998642 4 48999999998 999999985332 34555555665 899999875 22
Q ss_pred CCCCHH-HHHHHHHcCCCCCCccee
Q 017201 325 TKSDLP-TLLDKCKNKEFKLHQLLT 348 (375)
Q Consensus 325 ~~~~~~-~~~~~~~~~~~~~~~~~~ 348 (375)
...++ ...+++.++.+++.++++
T Consensus 316 -P~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 316 -PSRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -chhHHHHHHHHHHhCCccHHHHhc
Confidence 23555 589999998888766655
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.29 E-value=1.8e-12 Score=104.17 Aligned_cols=120 Identities=24% Similarity=0.318 Sum_probs=78.0
Q ss_pred cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC--ChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC
Q 017201 234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 311 (375)
Q Consensus 234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~ 311 (375)
||+++++|+++ .++ ....++|+|||++| +...+..++++| ++ |+++.++. .+.......+
T Consensus 1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC------cccchhhhhc
Confidence 68999999987 555 33448999999999 654456777888 97 99999973 1111111112
Q ss_pred CceEEEEeecccc----CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201 312 GRTLKGTTFGGIK----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 373 (375)
Q Consensus 312 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi 373 (375)
...+....+.+.. ..+.++.+.+++.+|++++ .+.++|||+++.+|++.+++++. +|+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2333333322110 2345889999999999995 48889999999999999999888 69986
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.60 E-value=4.9e-07 Score=88.14 Aligned_cols=109 Identities=21% Similarity=0.277 Sum_probs=82.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC-----------CcccHHHHHHh
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE-----------PNKSISELVKG 256 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~-----------~~~~~~~~i~~ 256 (375)
..++++|+|+|+|.+|++++++++.+|+ +|++++.++++++.++++|++.+...... ..+++.+...+
T Consensus 161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 3578999999999999999999999999 79999999999999999999764322110 01233333333
Q ss_pred hcC--CCCccEEEEcc---CChh---hHHHHHHhcccCCeEEEEEccCCC
Q 017201 257 ITH--GMGVDYCFECT---GVPS---LLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 257 ~~~--~~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
+.. .+++|+||+|+ |.+. ..++.++.++++ +.++.++...+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 332 24799999999 6543 467889999998 99999986654
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.56 E-value=4.2e-07 Score=83.02 Aligned_cols=163 Identities=20% Similarity=0.218 Sum_probs=101.4
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
.+.+++|++||.+|+|+ |..+.++++..|.. +|++++.+++..+.+++. +...+-... .++. .+ .+.+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d~~-~l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GEIE-AL-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cchh-hC-CCCC
Confidence 46788999999999987 98888888887753 799999999998888753 332211000 1221 11 1222
Q ss_pred CCCccEEEEcc------CChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHH
Q 017201 260 GMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL 333 (375)
Q Consensus 260 ~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (375)
..||+|+... .....+..+.++|+++ |+++..+...... ++ ..+. +...+.+.... ......++.
T Consensus 145 -~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~--~~-~~~~-~~~~~~~~~~~---~~~~~~e~~ 215 (272)
T PRK11873 145 -NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE--LP-EEIR-NDAELYAGCVA---GALQEEEYL 215 (272)
T ss_pred -CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC--CC-HHHH-HhHHHHhcccc---CCCCHHHHH
Confidence 3799998553 2235789999999998 9999887554221 11 1111 22222222111 123456677
Q ss_pred HHHHcCCCCC-CcceeeEeecccHHHHHHHH
Q 017201 334 DKCKNKEFKL-HQLLTHHVKLEEIDKAIQLL 363 (375)
Q Consensus 334 ~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 363 (375)
+++++..+.. .......++++++.++++.+
T Consensus 216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 7777644432 22234568899999999988
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.41 E-value=1.8e-08 Score=97.33 Aligned_cols=160 Identities=16% Similarity=0.210 Sum_probs=106.3
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccC
Q 017201 64 VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS 143 (375)
Q Consensus 64 i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g 143 (375)
.-|.|+++.+.+|++++++ .|++.+.+ |+.|..| +..|.+... .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~--~g~~l~~------------------ 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT--VGKVLER------------------ 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC--chHHHHH------------------
Confidence 4589999999999999876 67777777 8888888 666655443 2444444
Q ss_pred ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhh---hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Q 017201 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA---AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG 220 (375)
Q Consensus 144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~---l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~ 220 (375)
.|++++.++. .+.. ...++ ..+.+.++.+ ..+..+..++++|+|+|+|.+|.++++.++..|+.+|++
T Consensus 139 lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v 209 (417)
T TIGR01035 139 LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILI 209 (417)
T ss_pred HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEE
Confidence 7888887765 2222 00110 0011222222 123344578899999999999999999999999669999
Q ss_pred EcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh
Q 017201 221 IDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 274 (375)
Q Consensus 221 ~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~ 274 (375)
++++.++.. +++.++... +.. .+..+.+. ++|+||+|++++.
T Consensus 210 ~~rs~~ra~~la~~~g~~~-i~~-----~~l~~~l~------~aDvVi~aT~s~~ 252 (417)
T TIGR01035 210 ANRTYERAEDLAKELGGEA-VKF-----EDLEEYLA------EADIVISSTGAPH 252 (417)
T ss_pred EeCCHHHHHHHHHHcCCeE-eeH-----HHHHHHHh------hCCEEEECCCCCC
Confidence 999988754 666777642 221 12222221 6999999998764
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.33 E-value=8.3e-06 Score=78.13 Aligned_cols=102 Identities=25% Similarity=0.298 Sum_probs=77.6
Q ss_pred hhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhh
Q 017201 179 YGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 179 ~~~l~~~~~~~-~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +. ++.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal--- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA--- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH---
Confidence 33333332444 89999999999999999999999999 899999999887666666754 22 122222
Q ss_pred cCCCCccEEEEccCChhhHH-HHHHhcccCCeEEEEEccCC
Q 017201 258 THGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 258 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 297 (375)
.++|+||+++|+...+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 16899999999886676 678888987 8888888665
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.22 E-value=2.1e-05 Score=75.00 Aligned_cols=93 Identities=26% Similarity=0.301 Sum_probs=74.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
..+|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+ .+.|++|
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal------~~aDVVI 255 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA------KIGDIFI 255 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH------hcCCEEE
Confidence 4789999999999999999999999999 899999998887777767763 221 22222 1579999
Q ss_pred EccCChhhHHH-HHHhcccCCeEEEEEccCC
Q 017201 268 ECTGVPSLLSE-ALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 268 d~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 297 (375)
+++|+...+.. .+..++++ +.++.+|...
T Consensus 256 taTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 256 TATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred ECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 99998877764 88888887 8999888664
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.20 E-value=2.5e-05 Score=72.04 Aligned_cols=111 Identities=19% Similarity=0.200 Sum_probs=80.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.+++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|+..+ .. .++.+.+ . ++|+||++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l----~--~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV----G--KIDIIFNT 217 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh----C--CCCEEEEC
Confidence 68999999999999999999999999 99999999998888888887532 11 1222222 2 59999999
Q ss_pred cCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEE
Q 017201 270 TGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKG 317 (375)
Q Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (375)
++..-.....+..++++ +.++.++...+ ...+ .....++++..+
T Consensus 218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg-gtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 218 IPALVLTKEVLSKMPPE-ALIIDLASKPG-GTDF--EYAEKRGIKALL 261 (296)
T ss_pred CChhhhhHHHHHcCCCC-cEEEEEccCCC-CcCe--eehhhCCeEEEE
Confidence 87553345677888997 99999986654 2222 233335566553
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.14 E-value=1.3e-05 Score=72.07 Aligned_cols=136 Identities=18% Similarity=0.240 Sum_probs=83.1
Q ss_pred ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 223 (375)
Q Consensus 144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~ 223 (375)
+|.+|.. +...++++++++++..+.--. +.. .+..+. ....++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555533 667788898888776554211 111 111111 1257899999999987 888876655 57657999999
Q ss_pred ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccCC
Q 017201 224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++...+.+++.-...-+. .. ..+ ..+...||+|+.+.... ..++.+.+.|+++ |.++..|...
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~---~~~------~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN---VYL------PQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce---EEE------ccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 998887765421100000 00 000 00111599998766543 3467888999998 9999876543
No 139
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.13 E-value=1.7e-07 Score=90.84 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=96.1
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccC
Q 017201 64 VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS 143 (375)
Q Consensus 64 i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g 143 (375)
.-|||+++.+.+|++++++. |++.+.+ |.+|+ +-+..|..... .|...++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~-----V~GE~qI----lgQvk-~a~~~a~~~g~--~g~~l~~------------------ 140 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSM-----VLGEPQI----LGQVK-DAYALAQEAGT--VGTILNR------------------ 140 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhh-----hcCChHH----HHHHH-HHHHHHHHcCC--chHHHHH------------------
Confidence 35999999999999998774 4433333 34444 33333433221 1222222
Q ss_pred ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhh---cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Q 017201 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE---AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG 220 (375)
Q Consensus 144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~---~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~ 220 (375)
.|++.+.++ +.+..+.+. ...+.+.++.++... .+..++++|+|+|+|.+|.++++.++..|+.+|++
T Consensus 141 lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v 211 (423)
T PRK00045 141 LFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITV 211 (423)
T ss_pred HHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEE
Confidence 455444333 332222221 122344555544211 12367899999999999999999999999878999
Q ss_pred EcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh
Q 017201 221 IDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 274 (375)
Q Consensus 221 ~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~ 274 (375)
+++++++.+ +++.+|.+ +++. .+..+.+ .++|+||+|++++.
T Consensus 212 ~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l------~~aDvVI~aT~s~~ 254 (423)
T PRK00045 212 ANRTLERAEELAEEFGGE-AIPL-----DELPEAL------AEADIVISSTGAPH 254 (423)
T ss_pred EeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh------ccCCEEEECCCCCC
Confidence 999988865 66677753 3221 1222222 16899999998764
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.07 E-value=1e-05 Score=75.20 Aligned_cols=130 Identities=20% Similarity=0.241 Sum_probs=86.5
Q ss_pred ccEEEcCCCCCcccccccccchhhhhhhhhhhcCC----CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-
Q 017201 154 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK- 228 (375)
Q Consensus 154 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~- 228 (375)
...+++|+.+..+.++... +.+.++.++ +.+.. .++.+|+|+|+|.+|..+++.++..|+.+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4567778888888887765 556666654 23332 4799999999999999999999988877899999998875
Q ss_pred HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhh---HHHHHHhcccCCeEEEEEccCC
Q 017201 229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 229 ~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++++++|.. +++. +++.+.+. ..|+||.+++.+.. +..++......+-.++.++.+.
T Consensus 217 ~la~~~g~~-~~~~-----~~~~~~l~------~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPr 276 (311)
T cd05213 217 ELAKELGGN-AVPL-----DELLELLN------EADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPR 276 (311)
T ss_pred HHHHHcCCe-EEeH-----HHHHHHHh------cCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 567778873 3322 12322221 48999999998744 2333333321113455565443
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.06 E-value=5e-05 Score=73.13 Aligned_cols=92 Identities=21% Similarity=0.301 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ ...+.+. ..|++|+
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv---------~leEal~------~ADVVI~ 315 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL---------TLEDVVS------EADIFVT 315 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec---------cHHHHHh------hCCEEEE
Confidence 679999999999999999999999999 89999999888767777776521 1222221 5799999
Q ss_pred ccCChhhH-HHHHHhcccCCeEEEEEccCC
Q 017201 269 CTGVPSLL-SEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 269 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+.|+...+ ...+..++++ +.++.+|...
T Consensus 316 tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 316 TTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred CCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 99987554 7899999997 9999998754
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.87 E-value=1.6e-05 Score=80.22 Aligned_cols=80 Identities=21% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHhhhcCCcEEeCCCCC
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---------------------PWKKEKGKAFGMTDFINPDDE 245 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~---------------------~~~~~~~~~lg~~~v~~~~~~ 245 (375)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 46789999999999999999999999999 89988842 34566778899887765432
Q ss_pred CcccH-HHHHHhhcCCCCccEEEEccCChh
Q 017201 246 PNKSI-SELVKGITHGMGVDYCFECTGVPS 274 (375)
Q Consensus 246 ~~~~~-~~~i~~~~~~~g~d~vid~~g~~~ 274 (375)
..+. .+.+. .++|+||+++|...
T Consensus 211 -~~~~~~~~~~-----~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 -GEDITLEQLE-----GEFDAVFVAIGAQL 234 (564)
T ss_pred -CCcCCHHHHH-----hhCCEEEEeeCCCC
Confidence 0111 11111 26999999999763
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.84 E-value=0.00018 Score=68.40 Aligned_cols=99 Identities=19% Similarity=0.230 Sum_probs=70.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++........+ .+++.+.+ . ++|+||+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l----~--~aDvVI~ 236 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV----K--RADLLIG 236 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH----c--cCCEEEE
Confidence 34569999999999999999999999 8999999988877664 455432222222 12232222 2 5899999
Q ss_pred ccC---C--hh-hHHHHHHhcccCCeEEEEEccCCC
Q 017201 269 CTG---V--PS-LLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 269 ~~g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
+++ . +. .....++.++++ +.++.++...+
T Consensus 237 a~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 237 AVLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 973 2 21 136788889997 99999986644
No 144
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.77 E-value=0.00014 Score=66.80 Aligned_cols=97 Identities=23% Similarity=0.263 Sum_probs=64.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcE-EeCCCCCCcccHHHHHHhhcCCCC
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD-FINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +... +.... .+ ...... .+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~~-~~ 225 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPIE-GK 225 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----cccccC-CC
Confidence 56889999999987 888877776 5666999999998887776542 2211 11010 01 111122 37
Q ss_pred ccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201 263 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 263 ~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
||+|+...... ..+..+.++|+++ |.++..|..
T Consensus 226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 99998766433 3566788999998 999887654
No 145
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.68 E-value=0.00034 Score=60.06 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=77.0
Q ss_pred cccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhhcCCcEEeCCCCCC
Q 017201 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDFINPDDEP 246 (375)
Q Consensus 171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lg~~~v~~~~~~~ 246 (375)
+.-+...|. +.+...+++|++||-+|+| +|..++-+|+..| +|+.+++.++=.+. ++.+|...|.....
T Consensus 55 is~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g-- 127 (209)
T COG2518 55 ISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG-- 127 (209)
T ss_pred ecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC--
Confidence 333444443 4578899999999999997 4999999999988 89999988764443 45688754322211
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
|- .+-+.....||.|+-+.+-+..-+..++.|+++ |+++..
T Consensus 128 --DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 128 --DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred --Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 00 112233347999988887765557889999998 887765
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.66 E-value=0.00033 Score=67.76 Aligned_cols=93 Identities=24% Similarity=0.329 Sum_probs=73.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ ++.+.++ ..|+|+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell~------~ADIVI 314 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVVE------TADIFV 314 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHHh------cCCEEE
Confidence 4689999999999999999999999999 89999888877655555565421 1222221 589999
Q ss_pred EccCChhhHH-HHHHhcccCCeEEEEEccCC
Q 017201 268 ECTGVPSLLS-EALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 268 d~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 297 (375)
.+.|....+. ..+..++++ +.++.+|...
T Consensus 315 ~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 315 TATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred ECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 9999876665 899999997 9999998664
No 147
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.65 E-value=0.00077 Score=61.72 Aligned_cols=139 Identities=12% Similarity=0.134 Sum_probs=83.8
Q ss_pred ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCCeE
Q 017201 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKI 218 (375)
Q Consensus 144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~~G~~ai~la~-~~G~~~V 218 (375)
.|-+|.++..+..+.- .....++..-| -+.|.|. |.+.. ..-..+.|+|..| +-.++..+..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4566666665543311 11111122223 4566664 22221 2334467777777 777776666666 4555599
Q ss_pred EEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 219 IGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 219 ~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+.+.+ +...++.+.+|. +.|+.+++ |..+... ..-+++|..|+.+.+....+.+...--..+.+|...
T Consensus 166 vglTS-~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLTS-ARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEec-CcchhhhhccCCceEEeehhh---------hhhccCC-CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 99985 445568899997 66887765 2333222 567899999999888888888877523456666554
No 148
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.58 E-value=0.0013 Score=60.29 Aligned_cols=94 Identities=18% Similarity=0.250 Sum_probs=69.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|++|+|+|.|.+|.+.++.++.+|+ +|++.++++++.+.+.++|...+ .. .++.+ ... +.|+||++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~l~~----~l~--~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NKLEE----KVA--EIDIVINT 216 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HHHHH----Hhc--cCCEEEEC
Confidence 57899999999999999999999998 99999999888777766665422 11 12222 222 68999999
Q ss_pred cCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 270 TGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+...-.-...+..++++ ..++.++...
T Consensus 217 ~P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 217 IPALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred CChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 86542224567778886 8888887654
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.51 E-value=0.00042 Score=56.06 Aligned_cols=100 Identities=23% Similarity=0.246 Sum_probs=63.9
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCc--EEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT--DFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
+--.+.++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++.. .++...+ +.+.+. .+
T Consensus 8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~------~~ 76 (135)
T PF01488_consen 8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ------EA 76 (135)
T ss_dssp STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH------TE
T ss_pred CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh------hC
Confidence 3446899999999999999999999999988999999999876654 45322 2333322 222221 59
Q ss_pred cEEEEccCChhh--HHHHHHhcccCCeEEEEEccCC
Q 017201 264 DYCFECTGVPSL--LSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 264 d~vid~~g~~~~--~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
|+||++++.+.. .+..+....+..+.++.++.+.
T Consensus 77 DivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 77 DIVINATPSGMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp SEEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CeEEEecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence 999999976522 2233333332103677776554
No 150
>PRK08324 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.00082 Score=69.45 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=71.0
Q ss_pred ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Q 017201 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID 222 (375)
Q Consensus 144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~ 222 (375)
++++|..+++..++++ +.++.+++..... ......+|+++||+|+ |++|...++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4667777777666666 4555555542110 0123347899999997 9999999998888999 899999
Q ss_pred CChhhHHHhh-hcCC----cE-EeCCCCCCcccHHHHHHhhcC-CCCccEEEEccC
Q 017201 223 KNPWKKEKGK-AFGM----TD-FINPDDEPNKSISELVKGITH-GMGVDYCFECTG 271 (375)
Q Consensus 223 ~~~~~~~~~~-~lg~----~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~vid~~g 271 (375)
+++++.+.+. .++. .. ..|-.+ .+.+.+.+.+... ..++|++|++.|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988765543 2332 11 223333 1223232332211 126999999998
No 151
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.44 E-value=0.0019 Score=55.88 Aligned_cols=102 Identities=23% Similarity=0.405 Sum_probs=70.0
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcC-CcEEeCCCCCCcccHHHHHHhh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFG-MTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
...++.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++ .++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 466889999999999987 9999999987642 38999999998887654 355 22221111 1222222222
Q ss_pred cCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201 258 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 258 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (375)
.+ .+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 -~~-~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NE-KFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CC-CCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 22 69999986543 34678889999997 998753
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.35 E-value=0.0012 Score=55.95 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=57.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC---cEEeCCCCC-CcccHHHHHHhhcCCCCcc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM---TDFINPDDE-PNKSISELVKGITHGMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~---~~v~~~~~~-~~~~~~~~i~~~~~~~g~d 264 (375)
-|.+|||.|+ +++|+..++-...+|- +|+++.+++++++.+++.-. ..+.|-.+. .-..+.+++++..+ ..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P--~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP--NLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC--chh
Confidence 4789999976 8999988888888897 99999999999998876543 234444430 01225555555444 488
Q ss_pred EEEEccC
Q 017201 265 YCFECTG 271 (375)
Q Consensus 265 ~vid~~g 271 (375)
+++++.|
T Consensus 81 vliNNAG 87 (245)
T COG3967 81 VLINNAG 87 (245)
T ss_pred eeeeccc
Confidence 9998887
No 153
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.32 E-value=0.0024 Score=53.76 Aligned_cols=103 Identities=21% Similarity=0.294 Sum_probs=73.2
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE--EeCCCCCCcccHHHHHHhh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGI 257 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~--v~~~~~~~~~~~~~~i~~~ 257 (375)
..++++||+.++=+|+|. |..++++|+..-..+|++++++++..+.. ++||.+. ++.... + +.+..
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p---~~L~~- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---P---EALPD- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---h---HhhcC-
Confidence 567899999888889863 77888999655455999999999988765 4688764 333322 2 22222
Q ss_pred cCCCCccEEEEccCCh--hhHHHHHHhcccCCeEEEEEccCC
Q 017201 258 THGMGVDYCFECTGVP--SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 258 ~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
-..+|.+|-.-|.. ..++.++..|+++ |+++.-...-
T Consensus 100 --~~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~naitl 138 (187)
T COG2242 100 --LPSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAITL 138 (187)
T ss_pred --CCCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeecH
Confidence 12589998665532 4688999999998 9998775443
No 154
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.29 E-value=0.0014 Score=62.63 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=75.6
Q ss_pred cccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccH
Q 017201 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 250 (375)
Q Consensus 171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~ 250 (375)
+..+-...+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~ 222 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY 222 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence 333444445555677889999999999996 57788899998898 9999999999998887643211011000 122
Q ss_pred HHHHHhhcCCCCccEEEEc-----cCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201 251 SELVKGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 251 ~~~i~~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 294 (375)
..+ .+ .||.|+.. ++. ...++.+.+.|+|+ |.++...
T Consensus 223 ----~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 ----RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred ----hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 112 23 69998643 333 24678889999998 9988754
No 155
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.28 E-value=0.0015 Score=57.14 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=59.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC----cEEeCCCCCCcccHHHHHHhhcCCC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM----TDFINPDDEPNKSISELVKGITHGM-G 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~----~~v~~~~~~~~~~~~~~i~~~~~~~-g 262 (375)
.++.++|+|| +++|.+.++.....|+ +|+.+.++.++++.+. +++. ...+|-.+ .+...+.+..+.... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578899999 9999999999999999 9999999999997764 5672 22344443 234445555554433 4
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|+.+++.|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999984
No 156
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.28 E-value=0.0041 Score=53.33 Aligned_cols=101 Identities=20% Similarity=0.190 Sum_probs=64.1
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
...+++|++||.+|+|+-++ +..+++.. +..+|++++.++.+ ...+...+ .+..+ ....+.+.+..+..+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence 45679999999999986554 44444443 44489999998864 11233322 13222 334445555555557
Q ss_pred ccEEEEcc-----CC------------hhhHHHHHHhcccCCeEEEEEc
Q 017201 263 VDYCFECT-----GV------------PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 263 ~d~vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~g 294 (375)
+|+|+... |. ...+..+.++|+++ |+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99999531 21 24677889999997 9988754
No 157
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.23 E-value=0.0035 Score=58.34 Aligned_cols=102 Identities=24% Similarity=0.223 Sum_probs=71.1
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
.+...++++++||.+|+| .|..++.+++..+. .+|++++.+++..+.++ +.|.+.+.... .+..+.+.
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~-- 145 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVP-- 145 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccc--
Confidence 456678999999999998 49999999998863 26999999988766554 35654332111 12222111
Q ss_pred cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
....+|+|+.+.+.+......++.|+++ |+++..
T Consensus 146 -~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 146 -EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred -ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 1236999999888665566788999997 987763
No 158
>PRK14967 putative methyltransferase; Provisional
Probab=97.17 E-value=0.018 Score=50.75 Aligned_cols=99 Identities=18% Similarity=0.179 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+... ++.+.+ .
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~~----~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARAV----E 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhhc----c
Confidence 345678899999999986 8888888875 55599999999988776543 3432222111 222211 2
Q ss_pred CCCccEEEEccCC---------------------------hhhHHHHHHhcccCCeEEEEEc
Q 017201 260 GMGVDYCFECTGV---------------------------PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 260 ~~g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~g 294 (375)
...||+|+....- ...+..+.+.|+++ |+++.+-
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 2379999875310 11345678899997 9888653
No 159
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.06 E-value=0.006 Score=51.82 Aligned_cols=92 Identities=24% Similarity=0.422 Sum_probs=63.7
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
.--.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+... .++.+.+. ..|+|
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~------~aDiv 95 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA------QADIV 95 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH------H-SEE
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc------hhhhh
Confidence 34578999999999999999999999999 9999999887766445555422 22333332 47999
Q ss_pred EEccCChh----h-HHHHHHhcccCCeEEEEEcc
Q 017201 267 FECTGVPS----L-LSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 267 id~~g~~~----~-~~~~~~~l~~~~G~iv~~g~ 295 (375)
+.+....+ . -...+..++++ ..++.++.
T Consensus 96 ~~~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 96 SLHLPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp EE-SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hhhhccccccceeeeeeeeeccccc-eEEEeccc
Confidence 88775321 1 23677888886 88887763
No 160
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.03 E-value=0.0007 Score=61.56 Aligned_cols=99 Identities=20% Similarity=0.310 Sum_probs=62.5
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELV 254 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i 254 (375)
+.+.++++||++||-+|+| -|-.+..+|+..|+ +|++++.++++.++++ +.|... +.. .+ +
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~-~D-----~---- 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL-QD-----Y---- 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE-S------G----
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-ee-----c----
Confidence 5678899999999999997 57778889999999 9999999999988775 455321 211 11 1
Q ss_pred HhhcCCCCccEEEE-----ccCC---hhhHHHHHHhcccCCeEEEEEcc
Q 017201 255 KGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 255 ~~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
+++.. .||.|+. .+|. +..+....+.|+|+ |++++-..
T Consensus 122 ~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 122 RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 12222 7998754 3342 23588899999998 99876543
No 161
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.03 E-value=0.0099 Score=52.67 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=65.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc---CCcEEe--CCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFI--NPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.+ +....+ |-.+ .+...+.+.+... -.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4689999998 9999999999999999 999999988877555 222 222222 2222 1223222222211 12
Q ss_pred CccEEEEccCChh-----------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201 262 GVDYCFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 262 g~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++|.++.+.+... .++..+.+++++ |+++.++...
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 5899998886420 134455566666 8888887553
No 162
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.01 E-value=0.002 Score=58.16 Aligned_cols=103 Identities=16% Similarity=0.227 Sum_probs=75.1
Q ss_pred hhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-E--Ee--CCCCCCccc
Q 017201 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-D--FI--NPDDEPNKS 249 (375)
Q Consensus 179 ~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~--v~--~~~~~~~~~ 249 (375)
+..+.+.++++||++||=+|+|- |.+++.+|+..|+ +|++++-|+++.+.+++ .|.. . +. |+++
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd----- 133 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD----- 133 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc-----
Confidence 44456889999999999999975 7788899999999 99999999999887654 4543 1 11 2222
Q ss_pred HHHHHHhhcCCCCccEEE-----EccCC---hhhHHHHHHhcccCCeEEEEEccCCC
Q 017201 250 ISELVKGITHGMGVDYCF-----ECTGV---PSLLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 250 ~~~~i~~~~~~~g~d~vi-----d~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
+ . + .||-|+ +.+|. +..+..+.++|+++ |++.+......
T Consensus 134 ~-------~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 134 F-------E-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred c-------c-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 1 1 1 378774 34454 34688899999998 99988776653
No 163
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.95 E-value=0.0061 Score=54.71 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=56.2
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cCCcE-E--eCCCCCCcccHHHHHHh-h
Q 017201 188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FGMTD-F--INPDDEPNKSISELVKG-I 257 (375)
Q Consensus 188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg~~~-v--~~~~~~~~~~~~~~i~~-~ 257 (375)
...+.++||+|| +++|...+......|+ +++.+.|+++|++.+.+ .+... + +|-.+ .+-.+.+.. +
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHH
Confidence 356789999999 9999987777778898 99999999999876642 33322 2 24333 333334433 2
Q ss_pred c-CCCCccEEEEccCC
Q 017201 258 T-HGMGVDYCFECTGV 272 (375)
Q Consensus 258 ~-~~~g~d~vid~~g~ 272 (375)
. .+..+|+.|+++|.
T Consensus 79 ~~~~~~IdvLVNNAG~ 94 (265)
T COG0300 79 KERGGPIDVLVNNAGF 94 (265)
T ss_pred HhcCCcccEEEECCCc
Confidence 2 22479999999984
No 164
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.91 E-value=0.016 Score=45.46 Aligned_cols=102 Identities=17% Similarity=0.324 Sum_probs=68.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ .++... ++..+- ... ...
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh
Confidence 3455677889999999976 888999999875459999999988877764 234322 222211 110 111
Q ss_pred hcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201 257 ITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g 294 (375)
.. ..+|+|+-..+.. +.++.+.+.|+++ |.++...
T Consensus 85 -~~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 -SL-PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hc-CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 11 2799998765332 3688899999998 9887653
No 165
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.91 E-value=0.0043 Score=52.18 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=66.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC-CCCC-------------cccHHHHHH
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEP-------------NKSISELVK 255 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~-~~~~-------------~~~~~~~i~ 255 (375)
+..+|+|+|+|.+|+.|+++++.+|+ +|++.+..+++.+..+..+...+... .+.. .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34889999999999999999999999 99999999998888887777554321 1100 012222233
Q ss_pred hhcCCCCccEEEEccC--C---hh-hHHHHHHhcccCCeEEEEEccCC
Q 017201 256 GITHGMGVDYCFECTG--V---PS-LLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 256 ~~~~~~g~d~vid~~g--~---~~-~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+... .+|++|-+.- + +. .-+..++.++++ ..++.++.-.
T Consensus 98 ~~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 98 EFIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 3222 4799886441 1 11 234678888887 8888886443
No 166
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.90 E-value=0.0066 Score=46.95 Aligned_cols=93 Identities=24% Similarity=0.315 Sum_probs=62.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhc----CC-cEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAF----GM-TDF-INPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~l----g~-~~v-~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
||++||-+|+|. |..++.+++. .++ +|++++.+++-.+.+++. +. +.+ +... ++ . ........
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~--~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E--FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H--GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c--cCcccCCC
Confidence 689999999974 8888888884 566 999999999888877642 21 111 1111 22 1 11222336
Q ss_pred ccEEEEcc-CCh---------hhHHHHHHhcccCCeEEEEE
Q 017201 263 VDYCFECT-GVP---------SLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 263 ~d~vid~~-g~~---------~~~~~~~~~l~~~~G~iv~~ 293 (375)
||+|+... ... ..++...+.|+|+ |+++.-
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99999877 221 1378899999997 988753
No 167
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.86 E-value=0.013 Score=49.58 Aligned_cols=93 Identities=22% Similarity=0.307 Sum_probs=61.6
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201 194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECTG 271 (375)
Q Consensus 194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g 271 (375)
|+|+|+ |.+|...++.+...|. +|+++++++++.+. ..+.+.+. |..+ . +.+.+... ++|.||.+.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d-----~-~~~~~al~--~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD-----P-DSVKAALK--GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC-----H-HHHHHHHT--TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh-----h-hhhhhhhh--hcchhhhhhh
Confidence 789998 9999999999999998 99999999998776 34444432 3322 2 22333222 6999999998
Q ss_pred Ch----hhHHHHHHhcccC-CeEEEEEccCC
Q 017201 272 VP----SLLSEALETTKVG-KGKVIVIGVGV 297 (375)
Q Consensus 272 ~~----~~~~~~~~~l~~~-~G~iv~~g~~~ 297 (375)
.. ......++.++.. -.+++.++..+
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred hhcccccccccccccccccccccceeeeccc
Confidence 42 2344444444332 13777766443
No 168
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0076 Score=54.98 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=54.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhh---cCCCCcc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGI---THGMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~---~~~~g~d 264 (375)
.+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|-.+ .+++...+.+. ..+ .+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence 4678999998 9999998888888899 99999999988877766665443 24333 12333333322 223 699
Q ss_pred EEEEccC
Q 017201 265 YCFECTG 271 (375)
Q Consensus 265 ~vid~~g 271 (375)
++|++.|
T Consensus 79 ~li~~Ag 85 (277)
T PRK05993 79 ALFNNGA 85 (277)
T ss_pred EEEECCC
Confidence 9999876
No 169
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.85 E-value=0.015 Score=48.00 Aligned_cols=103 Identities=24% Similarity=0.334 Sum_probs=66.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
-.-.|++++|.|=|.+|...++.++.+|+ +|++++.+|-+.-.+..-|.... .+.+.+ . ..|++
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~---------~~~~a~----~--~adi~ 82 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM---------TLEEAL----R--DADIF 82 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE----------HHHHT----T--T-SEE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec---------CHHHHH----h--hCCEE
Confidence 35689999999999999999999999999 99999999988776666666421 122222 1 57999
Q ss_pred EEccCChhhH-HHHHHhcccCCeEEEEEccCCCccccchHHHhh
Q 017201 267 FECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIALA 309 (375)
Q Consensus 267 id~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~ 309 (375)
|.++|..+.+ .+-++.++++ ..+..+|... ..++...+.
T Consensus 83 vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~d---~Eid~~~L~ 122 (162)
T PF00670_consen 83 VTATGNKDVITGEHFRQMKDG-AILANAGHFD---VEIDVDALE 122 (162)
T ss_dssp EE-SSSSSSB-HHHHHHS-TT-EEEEESSSST---TSBTHHHHH
T ss_pred EECCCCccccCHHHHHHhcCC-eEEeccCcCc---eeEeecccc
Confidence 9999987543 4678888886 6666666443 344444443
No 170
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.84 E-value=0.016 Score=50.77 Aligned_cols=101 Identities=24% Similarity=0.357 Sum_probs=68.7
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV 254 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i 254 (375)
+.....+++|++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+. ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~-- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TL-- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------cc--
Confidence 44667889999999999874 7788888887753 389999999888776653 34322 222211 00
Q ss_pred HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
.......||.|+-........+...+.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 0112236999876655554667888999998 998765
No 171
>PRK04148 hypothetical protein; Provisional
Probab=96.84 E-value=0.0077 Score=48.16 Aligned_cols=96 Identities=21% Similarity=0.234 Sum_probs=63.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
...++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+...+.+.-- +.++ .+. +++|+|
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y-----~~a~li 81 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY-----KNAKLI 81 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH-----hcCCEE
Confidence 34466889999999 78744445557798 9999999999999898888765543221 1222 111 268999
Q ss_pred EEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 267 FECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 267 id~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
...-..++.....+++.+.-+.-++..
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 888877765556666655543344443
No 172
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.82 E-value=0.012 Score=55.81 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=64.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC---Cc-EEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---MT-DFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.+|||+|+|.+|+.+++.+.+.|-.+|++++++.++.+.+.... .+ ..+|..+ .+.+.+.| . ++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li----~--~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALI----K--DFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHH----h--cCCEEE
Confidence 57999999999999999988777349999999999998886653 22 2345444 12232333 2 469999
Q ss_pred EccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201 268 ECTGVPSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
++....-....+-.|+..+ -.++.+...
T Consensus 74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 74 NAAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred EeCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 9998764444444555554 455555433
No 173
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.82 E-value=0.013 Score=51.19 Aligned_cols=106 Identities=17% Similarity=0.243 Sum_probs=72.9
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHHh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVKG 256 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~~ 256 (375)
...++.+...+||=+|.+ +|..++++|..+. -.+++.++.++++.+.++ +.|.+.. ..... -+..+.+.+
T Consensus 52 ~~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~ 127 (219)
T COG4122 52 RLLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSR 127 (219)
T ss_pred HHHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHh
Confidence 345667788999999874 5888899999886 338999999999998876 4566442 11110 134444544
Q ss_pred hcCCCCccEEE-Ecc--CChhhHHHHHHhcccCCeEEEEEc
Q 017201 257 ITHGMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 257 ~~~~~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~iv~~g 294 (375)
...+ .||+|| |+. -.++.++.++.+|+++ |.++.=.
T Consensus 128 ~~~~-~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 128 LLDG-SFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred ccCC-CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 2233 799985 444 2346799999999997 8776543
No 174
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.82 E-value=0.0097 Score=54.25 Aligned_cols=130 Identities=22% Similarity=0.312 Sum_probs=76.5
Q ss_pred ccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201 154 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 233 (375)
Q Consensus 154 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~ 233 (375)
...++|.+++.+ ......+|++..=+....+++|.+||=+|+| .|.+++..+| +|+.+|++++.++--.+.+++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~lcL~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~e 203 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSLCLEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAARE 203 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHHHHHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHHH
Confidence 556667666533 2333444443211122346799999999997 3777766554 577699999998866655542
Q ss_pred ---c-CCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccCC
Q 017201 234 ---F-GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 234 ---l-g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+ +..... ... .+ .......++.||+|+-+.=.. ...+.....++|+ |.+++.|...
T Consensus 204 Na~~N~v~~~~-~~~----~~--~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 204 NARLNGVELLV-QAK----GF--LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred HHHHcCCchhh-hcc----cc--cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 1 222100 000 00 001111224799999887433 2456788899997 9999998665
No 175
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.82 E-value=0.013 Score=49.05 Aligned_cols=98 Identities=20% Similarity=0.231 Sum_probs=66.4
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
....|+...++...+.+...--.|.+|||+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 4455655555554443444457899999999986 59988899988999 8888876521
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++.+.+. .+|+||.+++.+..+.. +.++++ -.++.++.+.
T Consensus 80 --~l~~~l~------~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 --NLKEHTK------QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred --hHHHHHh------hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 2222222 58999999998754333 346665 7788887665
No 176
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.81 E-value=0.0074 Score=59.85 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=55.9
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
.+.+|++|+|+|.|.+|++++++++..|+ +|++.+.++++.+.++++|+..+. ... ..+.+ .++|+|
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~-----~~~~l------~~~D~V 74 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD-----AVQQI------ADYALV 74 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc-----hHhHh------hcCCEE
Confidence 35678999999999999999999999999 999999777766667777875432 211 11222 157999
Q ss_pred EEccCCh
Q 017201 267 FECTGVP 273 (375)
Q Consensus 267 id~~g~~ 273 (375)
|.+.|-+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9999865
No 177
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.74 E-value=0.0076 Score=55.26 Aligned_cols=95 Identities=23% Similarity=0.302 Sum_probs=60.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh------cCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA------FGMTDFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~------lg~~~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
..+|++||=+|+| .|.+++..++ +|+++|++++.++.-.+.+++ +.....+.... +. . ..
T Consensus 159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~-------~-~~ 224 (295)
T PF06325_consen 159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE----DL-------V-EG 224 (295)
T ss_dssp SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS----CT-------C-CS
T ss_pred ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec----cc-------c-cc
Confidence 6889999999886 3666665555 588899999999877665542 12221121111 11 1 13
Q ss_pred CccEEEEccCChh---hHHHHHHhcccCCeEEEEEccCC
Q 017201 262 GVDYCFECTGVPS---LLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 262 g~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
.||+|+-+.-.+. ..+...++++++ |.+++.|...
T Consensus 225 ~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 225 KFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp -EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred cCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 7999998886552 344566788997 9999988765
No 178
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.72 E-value=0.013 Score=53.09 Aligned_cols=107 Identities=21% Similarity=0.309 Sum_probs=65.4
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee----CCCCCCcccHHHHHHhhc
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI----NPDDEPNKSISELVKGIT 258 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~~i~~~~ 258 (375)
-.|+.|+|+|| +++|...+.-.-..|+ +++.+.+..++++.+ ++++... ++ |-.+ .++..+.+....
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAI 86 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHH
Confidence 36789999999 8999865555556687 788888787777665 3444322 21 2222 122332221111
Q ss_pred -CCCCccEEEEccCChh-------------------------hHHHHHHhcccCC-eEEEEEccCCC
Q 017201 259 -HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGK-GKVIVIGVGVD 298 (375)
Q Consensus 259 -~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~iv~~g~~~~ 298 (375)
.-.++|+.|++.|-.. ....++..+++.+ |+|+.++...+
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 1227999999987431 2345666665554 89999976654
No 179
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.012 Score=53.57 Aligned_cols=78 Identities=18% Similarity=0.290 Sum_probs=53.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhc-CCCCccEEEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYCFE 268 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~-~~~g~d~vid 268 (375)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+.+.+.+.... ...++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899998 9999998888888899 99999998887776665555433 34433 133333333332 1236999999
Q ss_pred ccCC
Q 017201 269 CTGV 272 (375)
Q Consensus 269 ~~g~ 272 (375)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9973
No 180
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.63 E-value=0.0051 Score=53.59 Aligned_cols=102 Identities=21% Similarity=0.381 Sum_probs=66.1
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVK 255 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~ 255 (375)
+.+.+.++||++||-+|+| .|..++-+|+..|.. +|++++++++-.+.++ .++...+ +...+ . ..
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-----g---~~ 134 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-----G---SE 134 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES------G---GG
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-----h---hh
Confidence 4567789999999999987 488888888888743 6999998876555543 4565432 11111 0 01
Q ss_pred hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
.+.....||.|+-+.+-+..-...++.|+++ |+++..
T Consensus 135 g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 135 GWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred ccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 1222336999998887765556888999997 998874
No 181
>PRK12742 oxidoreductase; Provisional
Probab=96.61 E-value=0.034 Score=49.12 Aligned_cols=77 Identities=21% Similarity=0.240 Sum_probs=48.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
++++|||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ .+.+.+.+.+ ...+|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~---~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK---SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH---hCCCcE
Confidence 4789999998 9999998888888899 7877654 44444333 44555433 23322 1223333322 125899
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|++.|.
T Consensus 79 li~~ag~ 85 (237)
T PRK12742 79 LVVNAGI 85 (237)
T ss_pred EEECCCC
Confidence 9999874
No 182
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.60 E-value=0.032 Score=55.64 Aligned_cols=47 Identities=21% Similarity=0.174 Sum_probs=40.1
Q ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201 184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~ 231 (375)
...+.+.|++|||+|+ |.+|...++.+...|+ +|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4567789999999998 9999998888888899 999999998876543
No 183
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.55 E-value=0.012 Score=56.75 Aligned_cols=102 Identities=13% Similarity=0.060 Sum_probs=64.7
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
..+--.+.+|||+|+|.+|.+++..+...|+.+++++.++.+|.+.+ .+++...++.. +.+.+... .+
T Consensus 175 ~~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---------~~l~~~l~--~a 243 (414)
T PRK13940 175 QLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---------SELPQLIK--KA 243 (414)
T ss_pred HhcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---------HHHHHHhc--cC
Confidence 33445688999999999999999988889987899999998886554 44552222222 11222222 59
Q ss_pred cEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201 264 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 264 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
|+||.|++.+..+-. ...++...=.++.++.+.+
T Consensus 244 DiVI~aT~a~~~vi~-~~~~~~~~~~~iDLavPRd 277 (414)
T PRK13940 244 DIIIAAVNVLEYIVT-CKYVGDKPRVFIDISIPQA 277 (414)
T ss_pred CEEEECcCCCCeeEC-HHHhCCCCeEEEEeCCCCC
Confidence 999999998743211 1112211125677776653
No 184
>PRK08017 oxidoreductase; Provisional
Probab=96.53 E-value=0.01 Score=53.18 Aligned_cols=77 Identities=22% Similarity=0.362 Sum_probs=53.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccH---HHHHHhhcCCCCccEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSI---SELVKGITHGMGVDYC 266 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~---~~~i~~~~~~~g~d~v 266 (375)
+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++.++..+ .|..+ .+.+ .+.+.+...+ .+|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence 57999998 9999999988888898 89999999988887777776543 23332 1222 2223222223 68898
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
+.+.|.
T Consensus 79 i~~ag~ 84 (256)
T PRK08017 79 FNNAGF 84 (256)
T ss_pred EECCCC
Confidence 888763
No 185
>PRK06182 short chain dehydrogenase; Validated
Probab=96.53 E-value=0.015 Score=52.93 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=54.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~v 266 (375)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+ .+++.+.+.+... ..++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 9999998888888899 99999999887765554454332 23333 2333333333221 2269999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999873
No 186
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.53 E-value=0.013 Score=50.14 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=63.3
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
.++++.+||-+|+|. |..++.+++.....+|++++.+++..++++ +.+.+.+ .... .+..+ ......
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~----~~~~~~ 112 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE----FGQEEK 112 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh----CCCCCC
Confidence 345689999999863 667777776554349999999988776664 3444321 1111 12221 112337
Q ss_pred ccEEEEccCC--hhhHHHHHHhcccCCeEEEEEc
Q 017201 263 VDYCFECTGV--PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 263 ~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g 294 (375)
||+|+-.... +..++.+.++|+++ |+++.+-
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9999864322 24677889999998 9988774
No 187
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.52 E-value=0.039 Score=47.99 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=67.3
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCc---EEeCCCCCCcccHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISEL 253 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~ 253 (375)
+.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.++ ..+.. .++..+ ..+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccC
Confidence 34666789999999999874 778888888764 228999999988766554 34432 222221 1111
Q ss_pred HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
......||.|+-+.......+...+.|+++ |+++..
T Consensus 137 ---~~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 ---LEKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred ---CccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 111237999987766554556788999998 988653
No 188
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.018 Score=50.61 Aligned_cols=77 Identities=21% Similarity=0.377 Sum_probs=50.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE--eCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
.+|+|+|+ |++|...++.+...|+ +|+++++++++.+.+++++-..+ .|-.+ .+++.+.+..+. +.++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~-~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQ-GQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhh-cCCCCEEEE
Confidence 47899998 9999987777777898 99999998877765554432222 23222 122333333333 337999999
Q ss_pred ccCC
Q 017201 269 CTGV 272 (375)
Q Consensus 269 ~~g~ 272 (375)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8753
No 189
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.019 Score=51.02 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=52.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
.+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+...+ .|..+ .+......+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~--~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA--AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH--hCCCCEE
Confidence 5689999998 9999999998888998 8999999887765543 3444332 24333 2222222222 2268999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999874
No 190
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.42 E-value=0.036 Score=49.05 Aligned_cols=104 Identities=21% Similarity=0.292 Sum_probs=74.0
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
....+..+|++||=+|+| .|-+|..+++..|-.+|++++.+++-++.+++ .+... .+..+ ++.+.
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d-------Ae~LP- 114 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD-------AENLP- 114 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec-------hhhCC-
Confidence 345566799999999877 59999999999986699999999988877754 23221 11111 11121
Q ss_pred hcCCCCccEEEEccCCh------hhHHHHHHhcccCCeEEEEEccCC
Q 017201 257 ITHGMGVDYCFECTGVP------SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
..++ .||+|.-+.|-. .++.++.+.|+|+ |+++++....
T Consensus 115 f~D~-sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 115 FPDN-SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CCCC-ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 3333 799987766632 4789999999998 9999887664
No 191
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.42 E-value=0.061 Score=46.37 Aligned_cols=105 Identities=20% Similarity=0.321 Sum_probs=65.2
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVK 255 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~ 255 (375)
+....+++++++||=+|+|. |..++.+++.....+|++++.+++..+.++ +++... ++.. +..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHh
Confidence 34556778999999998853 556667776653349999999998877765 345432 2222 2222222
Q ss_pred hhcCCCCccE-EEEccCC-hhhHHHHHHhcccCCeEEEEEccC
Q 017201 256 GITHGMGVDY-CFECTGV-PSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 256 ~~~~~~g~d~-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
.+.. .+|. +++.... ...++.+.+.|+++ |+++.....
T Consensus 105 ~~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~ 144 (196)
T PRK07402 105 QLAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATASS 144 (196)
T ss_pred hCCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEeec
Confidence 2222 2344 4543322 35688899999997 998877533
No 192
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.047 Score=48.23 Aligned_cols=80 Identities=18% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC----CcEE-eCCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++. ...+ .|-.+ ..++.+.+.+... ..
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 4688999998 9999988877777899 899999988776543 2332 1111 23222 2333333433321 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 69999998763
No 193
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.39 E-value=0.013 Score=50.70 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=63.0
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
+..+..++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++. +...+ .... .++. +...
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~----~~~~ 92 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLN----NLTF 92 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChh----hCCc
Confidence 444566788999999975 7778888875 77 999999998876665432 22211 0000 1121 1111
Q ss_pred CCCccEEEEccC----C----hhhHHHHHHhcccCCeEEEEEc
Q 017201 260 GMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 260 ~~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g 294 (375)
...||+|+.+.. . ...+....++|+++ |.++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 236999987643 1 23577888999998 9865543
No 194
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.38 E-value=0.011 Score=51.95 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=66.8
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELV 254 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i 254 (375)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.++ +++.+. ++..+ ..+.
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~- 140 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQG- 140 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccC-
Confidence 44567889999999999874 7777788887653 26999999988777664 344432 22211 1111
Q ss_pred HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
......||+|+-............+.|+++ |+++..
T Consensus 141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 111237999876554444566788999997 987764
No 195
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.38 E-value=0.027 Score=49.76 Aligned_cols=106 Identities=22% Similarity=0.221 Sum_probs=75.4
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
....++.||++|+=.|.| .|.+++-||+..|. .+|+..+..++..+.++ +++....+.... .| +.+.
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~~ 158 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VREG 158 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----cccc
Confidence 457899999999999887 48888899987764 59999999998888764 345433221111 12 3333
Q ss_pred cCCCCccEEE-EccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 258 THGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 258 ~~~~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
..+..+|.|| |.---.+.++.+.+.|.++ |.++.+..+.
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~v 198 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTV 198 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCH
Confidence 3344799875 4444457899999999998 9999886544
No 196
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.015 Score=54.71 Aligned_cols=80 Identities=18% Similarity=0.307 Sum_probs=53.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+++|||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. .|-.+ .+++.+.+.+... .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5689999998 9999998888888999 899999998877543 34454332 23332 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 269999999973
No 197
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.35 E-value=0.01 Score=58.32 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhh
Q 017201 184 KEAKVEKGSSVA----VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 184 ~~~~~~~g~~Vl----I~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~ 257 (375)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.+ .++|... ..+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 467888999988 8876 9999999999999999 899988766654444434444 3455443 2233333222
Q ss_pred cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
. ..+...++.+.++ |+++.++...
T Consensus 103 ~---------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H---------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 2456677777776 8888887553
No 198
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.35 E-value=0.013 Score=50.09 Aligned_cols=81 Identities=15% Similarity=0.228 Sum_probs=56.9
Q ss_pred CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-EeCCCCC-CcccHHHHHHhhcCCCCcc
Q 017201 190 KGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-FINPDDE-PNKSISELVKGITHGMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v~~~~~~-~~~~~~~~i~~~~~~~g~d 264 (375)
....|||+|+ |++|.+.+.-...-|+ .|+++.++-++++.+. ++|... -+|-.+. ....+...++..++| +.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-ceE
Confidence 4568999976 9999987777777899 9999999999988776 677522 2333320 012234455555556 899
Q ss_pred EEEEccCC
Q 017201 265 YCFECTGV 272 (375)
Q Consensus 265 ~vid~~g~ 272 (375)
+.++..|-
T Consensus 84 ~L~NNAG~ 91 (289)
T KOG1209|consen 84 LLYNNAGQ 91 (289)
T ss_pred EEEcCCCC
Confidence 99998874
No 199
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.30 E-value=0.042 Score=51.04 Aligned_cols=91 Identities=26% Similarity=0.465 Sum_probs=61.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 270 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~ 270 (375)
.+|.|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|...... .+..+.+ .+.|+||.|+
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV 74 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence 579999999999988888877774 37999999999888888877532111 1122222 1589999999
Q ss_pred CChh---hHHHHHHhcccCCeEEEEEcc
Q 017201 271 GVPS---LLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 271 g~~~---~~~~~~~~l~~~~G~iv~~g~ 295 (375)
.... .+......++++ ..++.+|.
T Consensus 75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7652 233333456665 66666553
No 200
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.28 E-value=0.036 Score=50.85 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=37.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~ 231 (375)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 4568999999999999999999999998999999998887655
No 201
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.28 E-value=0.061 Score=46.76 Aligned_cols=115 Identities=13% Similarity=0.074 Sum_probs=66.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
.|.+|||+|+|.+|...++.+...|+ +|++++.... ....+.+.|--..+. .++. ...+ .++|+||-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~----~~dl------~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFD----ADIL------EGAFLVIA 75 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCC----HHHh------CCcEEEEE
Confidence 47799999999999999999999999 8998876543 222233333222222 2211 1111 26999999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT 318 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (375)
+++.++.-.......+.. |..+.+.... ...++-....+.+ .+++.-+
T Consensus 76 at~d~~ln~~i~~~a~~~-~ilvn~~d~~-e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 76 ATDDEELNRRVAHAARAR-GVPVNVVDDP-ELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CCCCHHHHHHHHHHHHHc-CCEEEECCCc-ccCeEEEeeEEEcCCEEEEEE
Confidence 999874434455555554 6666553222 2333433333333 3555433
No 202
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.051 Score=53.31 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCC
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKE-KGKAFGMTDF-INPDDEPNKSISELVKGITH-GMG 262 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~--~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g 262 (375)
.+|.++||+|+ |++|...++.+...|+ +|+++++++ ++.+ ...+++...+ .|-.+ .+...+.+..... ..+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence 46889999988 9999998888888899 888887643 2222 2334554332 34333 1222222222221 126
Q ss_pred ccEEEEccC
Q 017201 263 VDYCFECTG 271 (375)
Q Consensus 263 ~d~vid~~g 271 (375)
+|++|++.|
T Consensus 285 id~vi~~AG 293 (450)
T PRK08261 285 LDIVVHNAG 293 (450)
T ss_pred CCEEEECCC
Confidence 999999987
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.025 Score=50.79 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC-cEE--eCCCCCCcccHHHHHHhhc-C
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDF--INPDDEPNKSISELVKGIT-H 259 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~-~~v--~~~~~~~~~~~~~~i~~~~-~ 259 (375)
..+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+.+.+ .+. ..+ .|-.+ .+++.+.+.++. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 45789999988 9999998888888899 89999998887654422 121 112 23322 133333333321 1
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
...+|++|++.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 1268999999873
No 204
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.23 E-value=0.022 Score=56.23 Aligned_cols=79 Identities=25% Similarity=0.392 Sum_probs=55.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHhhhcCCcEEeCCCCCCc
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP---------------------WKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
..+++|+|+|+|+.|+.++..++..|+ +|++++..+ ...++++++|.+..++..- .
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~ 215 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--G 215 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--C
Confidence 368899999999999999999999999 888887654 2346677889876555421 0
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChh
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPS 274 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~ 274 (375)
.++ .+..+. .++|.||.++|..+
T Consensus 216 ~~~--~~~~~~--~~~D~vilAtGa~~ 238 (467)
T TIGR01318 216 RDI--SLDDLL--EDYDAVFLGVGTYR 238 (467)
T ss_pred Ccc--CHHHHH--hcCCEEEEEeCCCC
Confidence 111 111122 26999999999753
No 205
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.029 Score=50.01 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=51.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|-.+ .+...+.+..... .
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999998888898 899999887765433 2234322 123222 1222222332221 1
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
.++|++|++.|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 26899999987
No 206
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.20 E-value=0.061 Score=50.39 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=69.3
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCChhhHHHhh-h----cCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 186 AKVEKGSSVAVLGLGTVGLGAVDG-ARMHGAAKIIGIDKNPWKKEKGK-A----FGMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 186 ~~~~~g~~VlI~Gag~~G~~ai~l-a~~~G~~~V~~~~~~~~~~~~~~-~----lg~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
.......+++|+|+|..|...+.. +...+.++|.+.++++++.+.+. . ++.... .. .+..+.+
T Consensus 122 la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~-----~~~~~~~----- 190 (325)
T PRK08618 122 LAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV-----NSADEAI----- 190 (325)
T ss_pred hcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee-----CCHHHHH-----
Confidence 334556789999999999876654 44668889999999988876443 2 343311 11 1233333
Q ss_pred CCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH
Q 017201 260 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 305 (375)
Q Consensus 260 ~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~ 305 (375)
.+.|+|+.++++... ... ..++++ -.+..+|........++.
T Consensus 191 -~~aDiVi~aT~s~~p-~i~-~~l~~G-~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 191 -EEADIIVTVTNAKTP-VFS-EKLKKG-VHINAVGSFMPDMQELPS 232 (325)
T ss_pred -hcCCEEEEccCCCCc-chH-HhcCCC-cEEEecCCCCcccccCCH
Confidence 168999999987633 334 888997 888889876543444554
No 207
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.026 Score=50.65 Aligned_cols=80 Identities=19% Similarity=0.274 Sum_probs=52.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~ 265 (375)
+|++|||+|+ |.+|...++.....|+ +|+++++++++.+.. ..++...+ .|..+ .+.+.+.+.+... ..++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999998888888899 899999887765543 34443322 23333 1222222222211 126899
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998863
No 208
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.074 Score=47.36 Aligned_cols=102 Identities=19% Similarity=0.180 Sum_probs=60.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----hhhcCCcE---EeCCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEK----GKAFGMTD---FINPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~----~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+++.++.+ +.+. ++..+... ..|..+ .++..+.+.+....
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999988888888898 8988887643 2222 22223221 123333 12233233322211
Q ss_pred -CCccEEEEccCCh-------------------hhHHHHHHhcccCCeEEEEEcc
Q 017201 261 -MGVDYCFECTGVP-------------------SLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 261 -~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
.++|++|.+.+.. ..++.+...+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689999887642 1334455555555 78887764
No 209
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.17 E-value=0.029 Score=47.01 Aligned_cols=93 Identities=20% Similarity=0.325 Sum_probs=61.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
+|.|+|+ |-+|...++=|+..|. .|++++++++|....+..-+ ..+++.. .+.+.+ .|+|+||++
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~-----~~a~~l------~g~DaVIsA 69 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT-----SLASDL------AGHDAVISA 69 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh-----hhHhhh------cCCceEEEe
Confidence 6889999 9999999999999999 99999999999864322211 1122221 121222 279999999
Q ss_pred cCCh--h-------hHHHHHHhccc-CCeEEEEEccCC
Q 017201 270 TGVP--S-------LLSEALETTKV-GKGKVIVIGVGV 297 (375)
Q Consensus 270 ~g~~--~-------~~~~~~~~l~~-~~G~iv~~g~~~ 297 (375)
.+.. + ..+..+..++. +.-++..+|..+
T Consensus 70 ~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 70 FGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 9754 1 23345666655 235788887554
No 210
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.14 E-value=0.13 Score=42.82 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=57.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 271 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g 271 (375)
.+|.++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+..+- +..+.+. ..|+||-++.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~--------s~~e~~~------~~dvvi~~v~ 66 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD--------SPAEAAE------QADVVILCVP 66 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES--------SHHHHHH------HBSEEEE-SS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh--------hhhhHhh------cccceEeecc
Confidence 368899999999976666677798 999999999999888877754331 2222222 3689998888
Q ss_pred ChhhHHHH------HHhcccCCeEEEEEccCC
Q 017201 272 VPSLLSEA------LETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 272 ~~~~~~~~------~~~l~~~~G~iv~~g~~~ 297 (375)
+.+..... +..+.++ ..++.++..+
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred cchhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 76555443 3335564 6666665443
No 211
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.021 Score=51.45 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=53.6
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-C-C--cE-EeCCCCCCcccHHHHHHhhcC
Q 017201 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-G-M--TD-FINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g-~--~~-v~~~~~~~~~~~~~~i~~~~~ 259 (375)
...-++.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+.+. . . .. ..|..+ .+.+.+.+.+...
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 82 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE 82 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence 34457899999998 9999998888888899 899999887766544332 1 1 11 123332 1222222222211
Q ss_pred -CCCccEEEEccCCh
Q 017201 260 -GMGVDYCFECTGVP 273 (375)
Q Consensus 260 -~~g~d~vid~~g~~ 273 (375)
-.++|+||.+.|..
T Consensus 83 ~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 83 RFGGLDVLVNNAGIA 97 (264)
T ss_pred HhCCCCEEEECCCCC
Confidence 12699999988743
No 212
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.018 Score=53.20 Aligned_cols=80 Identities=18% Similarity=0.193 Sum_probs=53.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC--cEE---eCCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDF---INPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
+|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++. ... .|-.+ .++..+.+.+... ..
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999998888888999 899999988876544 33432 111 23333 1223333332221 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
.+|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 213
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.12 E-value=0.034 Score=53.14 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
+..+--.+.+|||+|+|-+|.+++......|..+|+++.++.+|.. +++++|+..+ ... +..+.+ . .
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l----~--~ 238 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEAL----A--E 238 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhh----h--h
Confidence 3444458899999999999999999999999889999999998875 4577885432 221 222222 2 4
Q ss_pred ccEEEEccCChhh-H--HHHHHhcccCCe-EEEEEccCCC
Q 017201 263 VDYCFECTGVPSL-L--SEALETTKVGKG-KVIVIGVGVD 298 (375)
Q Consensus 263 ~d~vid~~g~~~~-~--~~~~~~l~~~~G-~iv~~g~~~~ 298 (375)
+|+||-+++.+.. + ....+.+..... .++.++.|.+
T Consensus 239 ~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 239 ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 9999999987632 1 122233333212 5677777754
No 214
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.071 Score=47.44 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=50.8
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
.++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... + .|-.+ .+.+.+.+.+...
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 81 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAA 81 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999998888888898 899998887765433 2233221 1 23333 1222222222111
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|++|.+.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (250)
T PRK12939 82 LGGLDGLVNNAGI 94 (250)
T ss_pred cCCCCEEEECCCC
Confidence 1269999999874
No 215
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.11 E-value=0.025 Score=51.24 Aligned_cols=99 Identities=21% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
+..+|.|+|+|.+|.-|+.+|.-+|+ +|+..+.+.+|+..+..+-...+ .-++. ...+.+.++ +.|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~------~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK------KADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh------hccEEEE
Confidence 44567888999999999999999999 99999999999988876433332 22222 133444433 5899998
Q ss_pred ccC--Ch---h-hHHHHHHhcccCCeEEEEEccCCC
Q 017201 269 CTG--VP---S-LLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 269 ~~g--~~---~-~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
++- +. . ..++.++.++|+ +.++.+..-.+
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 872 11 1 356789999997 99999875443
No 216
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.09 E-value=0.029 Score=57.68 Aligned_cols=77 Identities=26% Similarity=0.359 Sum_probs=55.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCCcc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK 248 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~~ 248 (375)
.+++|+|+|+|+.|+.++..++..|+ +|++++..+. +.++++++|++..++..-....
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8999986652 4566678888766654310001
Q ss_pred cHHHHHHhhcCCCCccEEEEccCCh
Q 017201 249 SISELVKGITHGMGVDYCFECTGVP 273 (375)
Q Consensus 249 ~~~~~i~~~~~~~g~d~vid~~g~~ 273 (375)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH--hcCCEEEEeCCCC
Confidence 22 1222 2699999999864
No 217
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.07 E-value=0.031 Score=49.85 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC--Cc--E-EeCCCCCCcccHHHHHHhh-cCCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG--MT--D-FINPDDEPNKSISELVKGI-THGM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg--~~--~-v~~~~~~~~~~~~~~i~~~-~~~~ 261 (375)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. .. . ..|-.+ .+++...+.+. ....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4679999998 9999988888888899 8999999987765442 222 11 1 123222 22333333222 1122
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
.+|++|.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 218
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.03 E-value=0.1 Score=46.12 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=60.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHhhhcCCcEEeCCCCCCcccHHHHH
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKN----PWK--------KEKGKAFGMTDFINPDDEPNKSISELV 254 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~--~V~~~~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~~i 254 (375)
-.+.+|+|+|+|+.|...+..+...|++ +++.++++ .++ .++++.++... .+ .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~----~~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK----TG---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc----cc---CCHHHHH
Confidence 4668999999999999988888888997 89999988 444 22344443211 01 1233333
Q ss_pred HhhcCCCCccEEEEccCChhhH-HHHHHhcccCCeEEEEEccC
Q 017201 255 KGITHGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 255 ~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 296 (375)
. ++|++|++++.. .+ +..++.+.+. ..++.+..+
T Consensus 96 ~------~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~lsnP 130 (226)
T cd05311 96 K------GADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALANP 130 (226)
T ss_pred h------cCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeCCC
Confidence 1 489999999732 33 3566666675 666555433
No 219
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.03 E-value=0.06 Score=46.31 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=49.7
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c----CCcE-EeCCCCCCcccHHHHHHhhcCCC
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F----GMTD-FINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l----g~~~-v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
-++.+++|+|+ |.+|...+..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ .++..+.+ .
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~------~ 96 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI------K 96 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH------h
Confidence 36789999997 9999988777777887 99999998887655432 2 2221 122222 12222222 1
Q ss_pred CccEEEEccCCh
Q 017201 262 GVDYCFECTGVP 273 (375)
Q Consensus 262 g~d~vid~~g~~ 273 (375)
+.|+||.++...
T Consensus 97 ~~diVi~at~~g 108 (194)
T cd01078 97 GADVVFAAGAAG 108 (194)
T ss_pred cCCEEEECCCCC
Confidence 589999988765
No 220
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.03 E-value=0.076 Score=46.06 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=64.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-H-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-K-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.|.+|||+|+|.+|...++.+...|+ +|++++....+ . +++.. +.-.. ....+...+ + .++|+||
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~-~~~~~~~~~----l------~~adlVi 75 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRW-KQKEFEPSD----I------VDAFLVI 75 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEE-EecCCChhh----c------CCceEEE
Confidence 57899999999999988888888898 89888754322 1 22222 21111 112100011 1 2689999
Q ss_pred EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201 268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT 318 (375)
Q Consensus 268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (375)
-+++.+ .++..+...+.. +.++...... ...++-....+.+ .+++.-+
T Consensus 76 aaT~d~-elN~~i~~~a~~-~~lvn~~d~~-~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 76 AATNDP-RVNEQVKEDLPE-NALFNVITDA-ESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred EcCCCH-HHHHHHHHHHHh-CCcEEECCCC-ccCeEEEeeEEEcCCeEEEEE
Confidence 999988 556655555554 5666554332 2333433333323 3444433
No 221
>PLN02366 spermidine synthase
Probab=96.03 E-value=0.079 Score=49.07 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=64.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCC--CcccHHHHHHhhcCCCCc
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDE--PNKSISELVKGITHGMGV 263 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~--~~~~~~~~i~~~~~~~g~ 263 (375)
....++|||+|+|. |.++..++++-+..+|++++.+++-.+.++++-.. ..++.... ...|..+.+++.. +..|
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~-~~~y 166 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAP-EGTY 166 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhcc-CCCC
Confidence 35578999998865 66777888887666899999998877777653110 00100000 0123333444332 3379
Q ss_pred cEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201 264 DYCFECTGV----------PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 264 d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 294 (375)
|+||--... .+.++.+.++|+++ |.++.-+
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 998654322 23577889999998 9987543
No 222
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.02 E-value=0.042 Score=47.69 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 56889999999999999999999998899999876
No 223
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.042 Score=49.52 Aligned_cols=83 Identities=17% Similarity=0.238 Sum_probs=52.9
Q ss_pred CCCCCCEEEEECC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCcEE----eCCCCCCcccHHHHHH
Q 017201 187 KVEKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTDF----INPDDEPNKSISELVK 255 (375)
Q Consensus 187 ~~~~g~~VlI~Ga-g-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~~v----~~~~~~~~~~~~~~i~ 255 (375)
.+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+... + ++...+ .|..+ .+.....+.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~ 89 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALID 89 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHH
Confidence 3456789999987 6 799999999989999 8999988877654432 1 343222 23332 122333232
Q ss_pred hhcC-CCCccEEEEccCC
Q 017201 256 GITH-GMGVDYCFECTGV 272 (375)
Q Consensus 256 ~~~~-~~g~d~vid~~g~ 272 (375)
+... ...+|++|++.|.
T Consensus 90 ~~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 2211 1268999999984
No 224
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.055 Score=47.45 Aligned_cols=77 Identities=21% Similarity=0.299 Sum_probs=51.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ .+.+.+.+.+.. +.++|++|.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLD-GEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhc-CCCCCEEEEC
Confidence 46899988 9999987777767798 8999999888777666655432 223333 123333222332 3379999998
Q ss_pred cCC
Q 017201 270 TGV 272 (375)
Q Consensus 270 ~g~ 272 (375)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 864
No 225
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.047 Score=49.40 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=52.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcE---EeCCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTD---FINPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~---v~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++ +... ..|-.+ .++..+.+.+...-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4789999988 9999998888888899 8999999887765432 11 3221 123333 23333333333222
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 269999999874
No 226
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.97 E-value=0.018 Score=52.38 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=40.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 233 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~ 233 (375)
.+|+++||+|+|+.+.+++.-++..|+.+|+++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 468999999999999999999999998899999999999776653
No 227
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.96 E-value=0.025 Score=51.12 Aligned_cols=133 Identities=21% Similarity=0.257 Sum_probs=89.4
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC--------CcccHHHHHHh
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE--------PNKSISELVKG 256 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~--------~~~~~~~~i~~ 256 (375)
-++-.++..+|+.|.|..|+.++-.++.+|+ -|...+..+.+.+..+++|+..+-..+++ -.+++.++-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3455678899999999999999999999999 89999988988888888887543222211 12334333222
Q ss_pred hcC--CCCccEEEEccC---Ch--h-hHHHHHHhcccCCeEEEEEccCCCccccchH--HHhhcCCceEEEEe
Q 017201 257 ITH--GMGVDYCFECTG---VP--S-LLSEALETTKVGKGKVIVIGVGVDAMVPLNV--IALACGGRTLKGTT 319 (375)
Q Consensus 257 ~~~--~~g~d~vid~~g---~~--~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 319 (375)
+.. -+++|+||-+.- .+ . ....+...++|+ ..++.+....+.+..+.- .-...+++++.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 221 237999998873 22 1 245788999997 999999766552322222 22345678888754
No 228
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.96 E-value=0.082 Score=47.67 Aligned_cols=99 Identities=21% Similarity=0.245 Sum_probs=67.1
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCC
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
.....+.++++||=+|+|. |..+..+++..+..+|++++.+++-.+.+++.-. ..++.. +.. .+....
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~ 92 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQ 92 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCC
Confidence 3455678899999999863 6777888887754499999999988877765422 112221 111 112223
Q ss_pred CccEEEEccCC------hhhHHHHHHhcccCCeEEEEE
Q 017201 262 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 262 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
.+|+|+-...- ...+..+.++|+++ |.++..
T Consensus 93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 79999765432 24688899999998 988775
No 229
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.96 E-value=0.044 Score=45.08 Aligned_cols=95 Identities=26% Similarity=0.237 Sum_probs=58.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
..+.+++|+|+|.+|...++.+...|..+|+++++++++.+. +++++... .... .+..+. -.++|+|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------~~~~Dvv 85 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL------LAEADLI 85 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc------cccCCEE
Confidence 557899999999999988888887764489999998877654 44455421 0011 111111 1269999
Q ss_pred EEccCChhh----HHHHHHhcccCCeEEEEEcc
Q 017201 267 FECTGVPSL----LSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 267 id~~g~~~~----~~~~~~~l~~~~G~iv~~g~ 295 (375)
|.+++.... .......++++ ..++.++.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 999976521 11122345565 56665643
No 230
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.95 E-value=0.065 Score=48.83 Aligned_cols=95 Identities=20% Similarity=0.278 Sum_probs=66.5
Q ss_pred ccccchhhhhhhhhhhcC-CCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
.+||+....+.. .+..+ --.|.+|+|+|.|. +|.-.+.++...|+ +|+++.+...
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~--------------------- 193 (286)
T PRK14175 137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK--------------------- 193 (286)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------
Confidence 456655544443 34444 45899999999955 99999999999999 8988875321
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++.+.++ ..|+||.++|.+..+.. ..++++ ..++.+|...
T Consensus 194 -~l~~~~~------~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 -DMASYLK------DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred -hHHHHHh------hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 2222222 58999999998865554 457886 8888888654
No 231
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.95 E-value=0.069 Score=44.31 Aligned_cols=88 Identities=11% Similarity=0.100 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
-.|.+|||+|+|.+|.--++.+...|+ +|++++ ++..+.+++++... ...+. +.+. +=.++|+||-
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~-----dl~~a~lVia 76 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND-----DIKDAHLIYA 76 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh-----cCCCceEEEE
Confidence 357899999999999988887777898 888884 44333344454222 11221 1110 1126899999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEE
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIV 292 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~ 292 (375)
+++.+ .++..+...++. ..++.
T Consensus 77 aT~d~-e~N~~i~~~a~~-~~~vn 98 (157)
T PRK06719 77 ATNQH-AVNMMVKQAAHD-FQWVN 98 (157)
T ss_pred CCCCH-HHHHHHHHHHHH-CCcEE
Confidence 99887 556666656554 33443
No 232
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.95 E-value=0.041 Score=49.60 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=51.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCc-EE--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT-DF--INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~-~v--~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
+++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .+ .|-.+ .++..+.+.+... ...+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 5789999988 9999988888888899 89999998887765543 3321 11 23222 1233333333221 1269
Q ss_pred cEEEEccC
Q 017201 264 DYCFECTG 271 (375)
Q Consensus 264 d~vid~~g 271 (375)
|++|++.|
T Consensus 82 d~li~~ag 89 (263)
T PRK06200 82 DCFVGNAG 89 (263)
T ss_pred CEEEECCC
Confidence 99999987
No 233
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.05 Score=49.05 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c--CCc-EE--eCCCCCCcccHHHHHHhhcCCCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F--GMT-DF--INPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l--g~~-~v--~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ + +.. .. .|-.+ .+...+..........
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 4678999988 9999988887778898 89999998877654432 1 211 11 22222 1222222222211236
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 234
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.93 E-value=0.029 Score=51.38 Aligned_cols=43 Identities=28% Similarity=0.264 Sum_probs=37.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
.+.++||+|+|+.+.+++.-+...|+++|+++.++.+|.+.+.
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La 166 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLV 166 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 5789999999999999888888999889999999988876553
No 235
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.92 E-value=0.02 Score=51.15 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=66.2
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcE-E-eCCCCCCcccHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD-F-INPDDEPNKSISELV 254 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~-v-~~~~~~~~~~~~~~i 254 (375)
+...+++.||++|+=-|.|+ |.++..|++..|- .+|+..+.++++.+.++ ..|... + +..++...+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 45578999999999998763 7777788887752 39999999999988775 355532 1 22222000112
Q ss_pred HhhcCCCCccEEEEccCC-hhhHHHHHHhc-ccCCeEEEEEccC
Q 017201 255 KGITHGMGVDYCFECTGV-PSLLSEALETT-KVGKGKVIVIGVG 296 (375)
Q Consensus 255 ~~~~~~~g~d~vid~~g~-~~~~~~~~~~l-~~~~G~iv~~g~~ 296 (375)
.+.. ...+|.||-=... ...++.+.+.| +++ |+++.+...
T Consensus 107 ~~~~-~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 107 DEEL-ESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp STT--TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred cccc-cCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 1111 1368887544444 46899999999 887 999988533
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.90 E-value=0.043 Score=49.47 Aligned_cols=79 Identities=23% Similarity=0.158 Sum_probs=51.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcE-E--eCCCCCCcccHHHHHHhhcCC-CCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTD-F--INPDDEPNKSISELVKGITHG-MGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~~i~~~~~~-~g~ 263 (375)
++.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+++. +... . .|-.+ .+...+.+.+.... ..+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999988 9999988888888899 899999888776655442 3211 1 23322 12233333332211 268
Q ss_pred cEEEEccC
Q 017201 264 DYCFECTG 271 (375)
Q Consensus 264 d~vid~~g 271 (375)
|++|++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999986
No 237
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.89 E-value=0.038 Score=51.67 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cC-Cc---EEeCCCCCCcccHHHHHHhhcC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FG-MT---DFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg-~~---~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
.|.++||+|+ +++|...++.....|+ +|+.+++++++.+.+.+ .+ .. ...|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5889999998 9999976666666798 89999999988765421 22 11 1223221 11233444544444
Q ss_pred CCCccEEEEccC
Q 017201 260 GMGVDYCFECTG 271 (375)
Q Consensus 260 ~~g~d~vid~~g 271 (375)
+.++|++|++.|
T Consensus 130 ~~didilVnnAG 141 (320)
T PLN02780 130 GLDVGVLINNVG 141 (320)
T ss_pred CCCccEEEEecC
Confidence 445779999886
No 238
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.89 E-value=0.077 Score=45.93 Aligned_cols=110 Identities=25% Similarity=0.265 Sum_probs=67.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
--.|.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +++.. ++..+ + . . ...|++
T Consensus 25 ~l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----l----~---~-~~~Dv~ 89 (200)
T cd01075 25 SLEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----I----Y---S-VDADVF 89 (200)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----h----c---c-ccCCEE
Confidence 3467899999999999999999999999 99999998887766544 46542 32211 1 1 1 158898
Q ss_pred EEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHH-HhhcCCceEEE
Q 017201 267 FECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVI-ALACGGRTLKG 317 (375)
Q Consensus 267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~-~~~~~~~~~~~ 317 (375)
+-|......-...+..++. +++.-+..+ +.+ .... .+..+++.+..
T Consensus 90 vp~A~~~~I~~~~~~~l~~---~~v~~~AN~--~~~~~~~~~~L~~~Gi~~~P 137 (200)
T cd01075 90 APCALGGVINDDTIPQLKA---KAIAGAANN--QLADPRHGQMLHERGILYAP 137 (200)
T ss_pred EecccccccCHHHHHHcCC---CEEEECCcC--ccCCHhHHHHHHHCCCEEeC
Confidence 8665433233444555553 233333222 112 2222 24556777655
No 239
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.041 Score=49.70 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=50.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+... + .|..+ .+...+.+.+... -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999988 9999998888888899 9999999887654432 223221 2 23333 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 269999998873
No 240
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.87 E-value=0.049 Score=50.49 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=70.9
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHh-hhcC---CcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG-KAFG---MTDFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
......+++|+|+|..|.+.++.+. ..+.++|.+.++++++.+.+ .++. ..... .+..+.+.
T Consensus 121 a~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~-------~~~~~av~------ 187 (304)
T PRK07340 121 APAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP-------LDGEAIPE------ 187 (304)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE-------CCHHHHhh------
Confidence 3356678999999999998877776 46777899999998886644 3332 22111 12333331
Q ss_pred CccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh
Q 017201 262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA 309 (375)
Q Consensus 262 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~ 309 (375)
+.|+|+.++.+...+-..+ ++++ -.+..+|........++...+.
T Consensus 188 ~aDiVitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p~~~El~~~~~~ 232 (304)
T PRK07340 188 AVDLVVTATTSRTPVYPEA--ARAG-RLVVAVGAFTPDMAELAPRTVR 232 (304)
T ss_pred cCCEEEEccCCCCceeCcc--CCCC-CEEEecCCCCCCcccCCHHHHh
Confidence 6999999997653322333 6886 8899998776445566655443
No 241
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.86 E-value=0.19 Score=44.55 Aligned_cols=35 Identities=37% Similarity=0.504 Sum_probs=30.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34689999999999999988888999899999855
No 242
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.046 Score=48.91 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
++.++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... . .|-.+ .+.+.+.+.+... ..++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999998 9999987777777898 8999998876655444432211 1 23322 1233332322211 1268
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 243
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.063 Score=48.23 Aligned_cols=82 Identities=18% Similarity=0.243 Sum_probs=48.9
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhh-HHH----hhhcCC-c-EE--eCCCCCCcccHHHHHHh
Q 017201 188 VEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWK-KEK----GKAFGM-T-DF--INPDDEPNKSISELVKG 256 (375)
Q Consensus 188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~-~~~----~~~lg~-~-~v--~~~~~~~~~~~~~~i~~ 256 (375)
+..+.+|||+|+ |++|...++-+... |+ +|+.+++++++ .+. +++.+. . .+ .|-.+ .++..+.+.+
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence 456778999998 99999877655444 57 89999988775 332 233332 1 12 23322 1333333333
Q ss_pred hcCCCCccEEEEccCC
Q 017201 257 ITHGMGVDYCFECTGV 272 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~ 272 (375)
.....++|++|.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 3222379999887754
No 244
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.82 E-value=0.039 Score=56.87 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=52.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCCc
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~ 247 (375)
..|.+|+|+|+|+.|+.|+..++..|+ +|++++..+. ..++++++|.+...+..--.+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 8999986532 244566778765443211000
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCCh
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVP 273 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~ 273 (375)
..+ +.+ . .+||.||.++|..
T Consensus 404 i~~-~~~---~--~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISL-ESL---L--EDYDAVFVGVGTY 423 (654)
T ss_pred CCH-HHH---H--hcCCEEEEeCCCC
Confidence 111 111 1 2699999998853
No 245
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.051 Score=47.92 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDF-INPDDEPNKSISELVKGITH-GMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g 262 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++... ++..+...+ .|..+ .+++.+.+.+... -.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4789999998 9999988888888899 89999987765332 222333322 22222 1223222222211 126
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|+||++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999998863
No 246
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.051 Score=49.52 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=51.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-E---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-D---FINPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~---v~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.... . ..|-.+ .+.+.+.+..... -.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999998 9999988888888898 899999998877655443211 1 123333 1223333332211 1258
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999875
No 247
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.79 E-value=0.084 Score=46.95 Aligned_cols=105 Identities=18% Similarity=0.171 Sum_probs=67.4
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhc
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~ 258 (375)
...+..++++||-+|.| .|..++.+|+..+ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l~ 137 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQLL 137 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHHH
Confidence 45567788999999875 4666777777653 3499999999988877653 45422111111 23334444432
Q ss_pred C---CCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201 259 H---GMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 259 ~---~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (375)
. ...||+||--... ...++.++++++++ |.++.-
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 1 2479999755432 24678899999997 877653
No 248
>PRK04457 spermidine synthase; Provisional
Probab=95.78 E-value=0.13 Score=46.53 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CC----c--EEeCCCCCCcccHHHHHHhhcCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM----T--DFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~----~--~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
.++.+||++|+|+ |.++..+++.....+|++++.+++-.+.+++. +. . .++. .|..+.+.+. . .
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~ 135 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H 135 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence 4568999999874 77888888877544999999999998888753 22 1 1222 2333444432 2 3
Q ss_pred CccEEE-EccCC---------hhhHHHHHHhcccCCeEEEEE
Q 017201 262 GVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 262 g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
.||+|+ |.... .+.++.+.+.|+++ |.++.-
T Consensus 136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 699985 43211 35788899999998 988763
No 249
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.053 Score=49.18 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=51.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC-CcE-EeCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITH-GMGVDY 265 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~ 265 (375)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +.++ ... ..|-.+ .+++.+.+.+... ..++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999988877777899 899999988876544 3344 222 223333 2233333333221 126999
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999873
No 250
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.049 Score=48.76 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=48.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcCCCC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+... ..|-.+ . +.+.+...+ +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~-~~~~~~~~~-~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-----A-IDRAQAAEW-D 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-----H-HHHHHHhcC-C
Confidence 458999998 9999999988888998 8999998876654443 223221 123322 1 122222233 7
Q ss_pred ccEEEEccC
Q 017201 263 VDYCFECTG 271 (375)
Q Consensus 263 ~d~vid~~g 271 (375)
+|++|++.|
T Consensus 74 id~vi~~ag 82 (257)
T PRK09291 74 VDVLLNNAG 82 (257)
T ss_pred CCEEEECCC
Confidence 999999987
No 251
>PRK07574 formate dehydrogenase; Provisional
Probab=95.71 E-value=0.11 Score=49.53 Aligned_cols=89 Identities=20% Similarity=0.305 Sum_probs=58.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+..+.++.... .++.+.++ ..|+|+-+
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~------~aDvV~l~ 255 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS------VCDVVTIH 255 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh------cCCEEEEc
Confidence 67889999999999999999999999 99999987644444444553211 12222221 46888777
Q ss_pred cCChhh----H-HHHHHhcccCCeEEEEEc
Q 017201 270 TGVPSL----L-SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 270 ~g~~~~----~-~~~~~~l~~~~G~iv~~g 294 (375)
....+. + ...+..++++ ..++.++
T Consensus 256 lPlt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 256 CPLHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 753321 1 2456677776 7777665
No 252
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.70 E-value=0.034 Score=50.83 Aligned_cols=94 Identities=18% Similarity=0.151 Sum_probs=58.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
..+.++||+|+|++|.+++..+...|+.+|++++++.++.+.+. .++....+.. + .+.. +.. .++|+||
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~----~~~--~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQ----EEL--ADFDLII 190 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccch----hcc--ccCCEEE
Confidence 46788999999999999999999999669999999988876553 3332100100 1 0010 111 2689999
Q ss_pred EccCChhh-----HHHHHHhcccCCeEEEEE
Q 017201 268 ECTGVPSL-----LSEALETTKVGKGKVIVI 293 (375)
Q Consensus 268 d~~g~~~~-----~~~~~~~l~~~~G~iv~~ 293 (375)
+++..... .......+.+. ..++.+
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 99864310 01223556665 566555
No 253
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.70 E-value=0.11 Score=42.47 Aligned_cols=98 Identities=21% Similarity=0.239 Sum_probs=65.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---CcccHHHHHHhhcCCCCccEEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---PNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.+|+|+|+ |.+|.+++++.|..++ -|..++.++... -.+..+++..+- .++...+++.+...++++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 47899988 9999999999999999 888888665433 233344443320 1233445555556777999999
Q ss_pred EccCChh------------------------h--HHHHHHhcccCCeEEEEEccC
Q 017201 268 ECTGVPS------------------------L--LSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 268 d~~g~~~------------------------~--~~~~~~~l~~~~G~iv~~g~~ 296 (375)
...|+-. . -..+-..|+++ |-+.+.|..
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 8776421 1 12345678887 887777643
No 254
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.67 E-value=0.024 Score=43.40 Aligned_cols=88 Identities=24% Similarity=0.276 Sum_probs=54.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +..... . ..+. +. =.++|+||-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~----~~--l~~~~lV~~a 67 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFE----ED--LDGADLVFAA 67 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-G----GG--CTTESEEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHH----HH--HhhheEEEec
Confidence 57899999999999999999999998 999998774 1111 111111 1 1121 11 1269999999
Q ss_pred cCChhhHHHHHHhcccCCeEEEEEccC
Q 017201 270 TGVPSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
.+.+..-+......+.. +.++.....
T Consensus 68 t~d~~~n~~i~~~a~~~-~i~vn~~D~ 93 (103)
T PF13241_consen 68 TDDPELNEAIYADARAR-GILVNVVDD 93 (103)
T ss_dssp SS-HHHHHHHHHHHHHT-TSEEEETT-
T ss_pred CCCHHHHHHHHHHHhhC-CEEEEECCC
Confidence 98874444455555555 777777543
No 255
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.65 E-value=0.029 Score=48.71 Aligned_cols=101 Identities=21% Similarity=0.271 Sum_probs=66.7
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHH
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVK 255 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~ 255 (375)
..+.....+||-+|.+ +|..++.+|+.+ +. +|+.++.++++.+.++ +.|... ++.. +..+.+.
T Consensus 40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g------da~~~l~ 111 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEG------DALEVLP 111 (205)
T ss_dssp HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-------HHHHHH
T ss_pred HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe------ccHhhHH
Confidence 4455677899999985 588889999877 45 9999999999988775 345422 3322 3344444
Q ss_pred hhcCC---CCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201 256 GITHG---MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 256 ~~~~~---~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g 294 (375)
++... ..||+||--.... ..++.++.+|+++ |.++.=.
T Consensus 112 ~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 112 ELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp HHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred HHHhccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 44322 2699985433332 3577899999996 7766543
No 256
>PRK08317 hypothetical protein; Provisional
Probab=95.65 E-value=0.1 Score=46.01 Aligned_cols=102 Identities=24% Similarity=0.342 Sum_probs=68.7
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhc----CC-cEEeCCCCCCcccHHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF----GM-TDFINPDDEPNKSISELVK 255 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~~i~ 255 (375)
+.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..+...+. ...
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34567889999999999976 888889998873 33899999999888877654 11 11221111 010
Q ss_pred hhcCCCCccEEEEcc-----CC-hhhHHHHHHhcccCCeEEEEEc
Q 017201 256 GITHGMGVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 256 ~~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 294 (375)
.+.. ..+|+|+-.. .. ...+..+.++|+++ |.++...
T Consensus 82 ~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPD-GSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCC-CCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 1122 3689987542 22 24678899999998 9888764
No 257
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.057 Score=49.76 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=50.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+... + .|-.+ .+...+.+..... -
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999988 9999988887777898 9999999887765432 223221 2 23222 1223333332211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 268999999874
No 258
>PRK06196 oxidoreductase; Provisional
Probab=95.64 E-value=0.068 Score=49.73 Aligned_cols=79 Identities=18% Similarity=0.277 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC-CcE-EeCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG-MTD-FINPDDEPNKSISELVKGITH-GMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d 264 (375)
.+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++. ... ..|-.+ .+++.+.+.+... ..++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4689999998 9999988877777898 8999999887765432 222 221 123322 1223333333222 13699
Q ss_pred EEEEccC
Q 017201 265 YCFECTG 271 (375)
Q Consensus 265 ~vid~~g 271 (375)
++|++.|
T Consensus 102 ~li~nAg 108 (315)
T PRK06196 102 ILINNAG 108 (315)
T ss_pred EEEECCC
Confidence 9999987
No 259
>PRK06484 short chain dehydrogenase; Validated
Probab=95.63 E-value=0.14 Score=51.31 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=53.5
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE---EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD---FINPDDEPNKSISELVKGITHG-MG 262 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~g 262 (375)
..|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++... ..|-.+ .++..+.+.+.... ..
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 46788999988 9999988887778898 99999998877765543 44322 123333 12333333332211 25
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|++.|.
T Consensus 344 id~li~nAg~ 353 (520)
T PRK06484 344 LDVLVNNAGI 353 (520)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 260
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.63 E-value=0.22 Score=43.45 Aligned_cols=98 Identities=18% Similarity=0.242 Sum_probs=63.0
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.++ +++... +...+ ..+ .
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---~ 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK---G 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---C
Confidence 4567889999999999864 55566666664 3 8999999987766554 334322 22111 111 1
Q ss_pred hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201 257 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
+.....||+|+-............+.|+++ |+++..
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 112236999876655444566788999997 887754
No 261
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.62 E-value=0.077 Score=42.21 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=55.0
Q ss_pred EEEECC-CHHHHHHHHHHHHcC--CCeEEEEcCCh--hhH-HHhhhcCCcEEeCCCCCCcccHHHHHH------------
Q 017201 194 VAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNP--WKK-EKGKAFGMTDFINPDDEPNKSISELVK------------ 255 (375)
Q Consensus 194 VlI~Ga-g~~G~~ai~la~~~G--~~~V~~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~------------ 255 (375)
|.|+|+ |.+|..++++.+... + +|++.+-.. +++ +.+++|.+..+...++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 578899 999999999999997 5 777766433 332 3456788887765543 2222222
Q ss_pred --------hhcCCCCccEEEEccCChhhHHHHHHhcccC
Q 017201 256 --------GITHGMGVDYCFECTGVPSLLSEALETTKVG 286 (375)
Q Consensus 256 --------~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~ 286 (375)
++.....+|+|+.+..+-..+...+..+..+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 2222236788887776665777777777764
No 262
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.07 Score=47.92 Aligned_cols=78 Identities=12% Similarity=0.058 Sum_probs=49.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cC----CcE-EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG----MTD-FINPDDEPNKSISELVKGITHG-MG 262 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg----~~~-v~~~~~~~~~~~~~~i~~~~~~-~g 262 (375)
+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +. ... ..|-.+ .+.+.+.+.+.... ..
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999988 9999987777777899 89999998877654432 21 111 123322 12333333332211 24
Q ss_pred ccEEEEccC
Q 017201 263 VDYCFECTG 271 (375)
Q Consensus 263 ~d~vid~~g 271 (375)
+|++|++.|
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 899999886
No 263
>PLN02735 carbamoyl-phosphate synthase
Probab=95.58 E-value=0.16 Score=55.40 Aligned_cols=101 Identities=21% Similarity=0.239 Sum_probs=61.0
Q ss_pred ccchhhhhhhhhhhcCCCCCCEEEEECCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-
Q 017201 172 SCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF- 239 (375)
Q Consensus 172 ~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v- 239 (375)
..+.+.||.+.....+-..=.+|||+|+|++ |..+++.++..|+ +|+.+++++........+ ++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~y 81 (1102)
T PLN02735 4 ADTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTY 81 (1102)
T ss_pred cccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEE
Confidence 3456677876543333333468999999874 4458888888899 999999887542111111 3332
Q ss_pred eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH
Q 017201 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 280 (375)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~ 280 (375)
+.+.+ .+. +.++....++|.|+-+.|+...+..+.
T Consensus 82 i~p~~---~e~---v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 82 IAPMT---PEL---VEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred eCCCC---HHH---HHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 23333 233 333223347999999888765554444
No 264
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.57 E-value=0.17 Score=44.40 Aligned_cols=104 Identities=20% Similarity=0.189 Sum_probs=62.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh------hhH--HHhhhcC---------------C-cEEeCCCCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP------WKK--EKGKAFG---------------M-TDFINPDDE 245 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~------~~~--~~~~~lg---------------~-~~v~~~~~~ 245 (375)
+..+|+|+|.|++|.+++..+.+.|..+++.++-+. .|+ ......| + .+|...++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 567899999999999999999999998888887432 221 1111111 1 11111111
Q ss_pred CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH-HhcccCCeEEEEEccCCC
Q 017201 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL-ETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~-~~l~~~~G~iv~~g~~~~ 298 (375)
--..+.+.++... +||+||||.-+-..--.++ .|.+.+ =.++..+..++
T Consensus 108 --f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~ 157 (263)
T COG1179 108 --FITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG 157 (263)
T ss_pred --hhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence 0112344445555 8999999997654433333 455654 56666654443
No 265
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.06 Score=48.34 Aligned_cols=82 Identities=20% Similarity=0.178 Sum_probs=51.1
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH----HhhhcCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE----KGKAFGMTD---FINPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~----~~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~- 259 (375)
-.+.+++|+|+ |.+|...++.+...|+++|+++++++++.. .+++.+... ..|-.+ .+.+.+.+.....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35788999998 999999888888889944999998876554 223344332 123333 1222222222211
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|++|++.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 1269999999874
No 266
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.069 Score=47.50 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=50.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ .++....+..... ..++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999998888888899 899999887665443 3445432 1 23222 1222222222211 1268
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999999874
No 267
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.54 E-value=0.091 Score=46.48 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=50.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.+|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ ...+...+.+... -
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999988888888899 799999988775433 23343221 23332 1223333332211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|.+|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 258999999864
No 268
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.53 E-value=0.098 Score=46.56 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-F--INPDDEPNKSISELVKGITH-GMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g 262 (375)
.|+++||+|+ |.+|...++.+...|+ +|+.+++++.. .+.+++++... + .|-.+ .+++...+.+... ..+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999988887778899 89999876522 22333444321 1 23332 2333333333221 126
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|++.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 269
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.53 E-value=0.08 Score=50.84 Aligned_cols=90 Identities=22% Similarity=0.287 Sum_probs=56.1
Q ss_pred EEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhh--cC--CcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 194 VAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA--FG--MTD-FINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 194 VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~--lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ ... .+|..+ .. .+.++.. +.|+||
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~-~l~~~~~--~~dvVi 72 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PE-SLAELLR--GCDVVI 72 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HH-HHHHHHT--TSSEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HH-HHHHHHh--cCCEEE
Confidence 78999999999988888877643 89999999999776643 22 222 233333 22 2444443 469999
Q ss_pred EccCChhhHHHHHHhcccCCeEEEE
Q 017201 268 ECTGVPSLLSEALETTKVGKGKVIV 292 (375)
Q Consensus 268 d~~g~~~~~~~~~~~l~~~~G~iv~ 292 (375)
+|+|.......+-.|+..+ -.++.
T Consensus 73 n~~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT--EEEE
T ss_pred ECCccchhHHHHHHHHHhC-CCeec
Confidence 9998654445555666665 66666
No 270
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.05 Score=49.24 Aligned_cols=77 Identities=18% Similarity=0.287 Sum_probs=49.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYCF 267 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~vi 267 (375)
+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+... +... ..|-.+ .+++.+.+..... -..+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 568999988 9999987777777898 8999998876654321 2222 123332 2333333333221 12589999
Q ss_pred EccCC
Q 017201 268 ECTGV 272 (375)
Q Consensus 268 d~~g~ 272 (375)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99974
No 271
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.51 E-value=0.088 Score=49.04 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=48.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT 270 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~ 270 (375)
+|||+|+ |-+|...++.+...|+ +|++++++.++...+...+.+.+. |..+ ...+.+.+ . ++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~~~l~~al----~--g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--PETLPPSF----K--GVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--HHHHHHHH----C--CCCEEEECC
Confidence 6999998 9999998888888898 899999987766555555665433 2222 11222222 2 689999987
Q ss_pred C
Q 017201 271 G 271 (375)
Q Consensus 271 g 271 (375)
+
T Consensus 73 ~ 73 (317)
T CHL00194 73 T 73 (317)
T ss_pred C
Confidence 5
No 272
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.22 Score=45.17 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=48.0
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE----EeCCCCCCcccHHHHHHhhc-CCCC
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD----FINPDDEPNKSISELVKGIT-HGMG 262 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~~i~~~~-~~~g 262 (375)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|-.+ .+...+.+.+.. ...+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899988 9999998888888898 899998887665433 2233321 233333 122222222221 1125
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999974
No 273
>PRK08264 short chain dehydrogenase; Validated
Probab=95.47 E-value=0.092 Score=46.41 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=48.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDF-INPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
.+.++||+|+ |.+|...++.+...|+.+|++++++.++.+. .+. ..+ .|-.+ .+-...+.+.. ..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~--~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA--SDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc--CCCCE
Confidence 5678999988 9999998888888897679999988776542 222 111 23322 22222222221 25899
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9999976
No 274
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.074 Score=50.01 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=52.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.|.... .|-.+ .+++.+.+.+... -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999998 9999998888888899 899999988776543 23454321 23333 1233332222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 269999999874
No 275
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.083 Score=47.30 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ..+... ..|-.+ .+.+.+.+.+... -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999998 9999988888888899 8999998877665432 223221 123332 1233333332211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 269999998873
No 276
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.076 Score=47.53 Aligned_cols=80 Identities=20% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... + .|-.+ .+...+.+.+... -
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999988 9999988888888899 8999998887765432 233322 1 23222 1222222332221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 269999999873
No 277
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.44 E-value=0.14 Score=48.48 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=64.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEc--CChhhH-HHhhhcCCcEEeCCCCCCcccHHHHHHh---------
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGID--KNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKG--------- 256 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~--~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~--------- 256 (375)
.+|.|+|+ |++|..+++..+.. .+ +|++++ ++.+++ +.++++++..+.-.++ .....+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 47899997 99999999988766 45 777775 444444 4456788887654432 11222222
Q ss_pred ---------hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEE
Q 017201 257 ---------ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 292 (375)
Q Consensus 257 ---------~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~ 292 (375)
+.....+|+|+.+.++...+...+.+++.+ -++.+
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 222236999999998776788888999875 55444
No 278
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.074 Score=47.60 Aligned_cols=79 Identities=15% Similarity=0.148 Sum_probs=49.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-Ee--CCCCCCcccHHHHHHhhcC-CC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-FI--NPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+... ++ |-.+ .+...+.+.+... ..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 568999988 9999998888888899 8999998877655432 223221 22 3222 1233333322211 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
.+|++|++.|.
T Consensus 78 ~id~lI~~ag~ 88 (252)
T PRK07677 78 RIDALINNAAG 88 (252)
T ss_pred CccEEEECCCC
Confidence 58999999873
No 279
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=46.59 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=50.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.... .|-.+ ...+.+.+.+... -
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999988888888899 899999888665432 33444321 13222 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 258999999874
No 280
>PRK06128 oxidoreductase; Provisional
Probab=95.40 E-value=0.21 Score=46.09 Aligned_cols=81 Identities=17% Similarity=0.092 Sum_probs=47.4
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--H----HHhhhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--K----EKGKAFGMTDF---INPDDEPNKSISELVKGIT 258 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~----~~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~ 258 (375)
-.|.++||+|+ |++|...++.....|+ +|+.+.++++. . +.+++.+.... .|-.+ .+...+.+.+..
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~ 129 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAV 129 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHH
Confidence 35789999988 9999988877777899 88877654322 1 22333443221 23222 122222222221
Q ss_pred C-CCCccEEEEccCC
Q 017201 259 H-GMGVDYCFECTGV 272 (375)
Q Consensus 259 ~-~~g~d~vid~~g~ 272 (375)
. -.++|++|++.|.
T Consensus 130 ~~~g~iD~lV~nAg~ 144 (300)
T PRK06128 130 KELGGLDILVNIAGK 144 (300)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 1269999999873
No 281
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.13 Score=46.42 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+... + .|-.+ .+++.+.+.+... -
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999988 9999988888888899 899999887765432 2223221 1 23332 1233333333221 1
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
.++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 26899998875
No 282
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.37 E-value=0.058 Score=46.49 Aligned_cols=100 Identities=16% Similarity=0.207 Sum_probs=60.9
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhh
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
+.+.....++.+||-+|+| .|..+..+++. |. +|++++.+++-.+.+++ .+....... .+... ...
T Consensus 22 l~~~~~~~~~~~vLDiGcG-~G~~a~~la~~-g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~~--~~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCG-QGRNSLYLSLA-GY-DVRAWDHNPASIASVLDMKARENLPLRTDA-----YDINA--AAL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCC-CCHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe-----ccchh--ccc
Confidence 3444455567899999986 37777777764 77 99999999877766543 232211100 11110 011
Q ss_pred cCCCCccEEEEccC----C----hhhHHHHHHhcccCCeEEEEEc
Q 017201 258 THGMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 258 ~~~~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g 294 (375)
. ..+|+|+.+.. . ...+..+.++|+++ |.++.+.
T Consensus 92 -~-~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 92 -N-EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred -c-CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 2 26999976532 1 23677888999998 9865553
No 283
>PLN02476 O-methyltransferase
Probab=95.37 E-value=0.13 Score=46.78 Aligned_cols=105 Identities=15% Similarity=0.232 Sum_probs=67.5
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhc
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~ 258 (375)
...+..+..+||-+|.+ +|..++.+|+.++ -.+|++++.+++..+.++ +.|...-+.-.. .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~ 187 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI 187 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 45566788999999884 4777778888763 227999999999887774 456542111111 23334444332
Q ss_pred ---CCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEE
Q 017201 259 ---HGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 259 ---~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 293 (375)
....||.||--.... ..++.++++++++ |.++.=
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 123799986544432 4678899999997 877643
No 284
>PRK00811 spermidine synthase; Provisional
Probab=95.36 E-value=0.099 Score=47.92 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC------C--c---EEeCCCCCCcccHHHHHHhh
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M--T---DFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------~--~---~v~~~~~~~~~~~~~~i~~~ 257 (375)
...++||++|+|. |..+..++++.+..+|++++.+++-.+.+++.- . + .++. .|..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999998864 667777888767669999999998888877531 1 0 1121 233333433
Q ss_pred cCCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201 258 THGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 258 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 294 (375)
. ...||+||--... .+.++.+.+.|+++ |.++...
T Consensus 147 ~-~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 T-ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred C-CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 2 3379998754321 23467788999998 9888653
No 285
>PRK00536 speE spermidine synthase; Provisional
Probab=95.35 E-value=0.069 Score=48.09 Aligned_cols=99 Identities=8% Similarity=-0.113 Sum_probs=65.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
...++|||+|+|- |.++=+++|+-. +|+.++.+++=.+.++++-.. ..++... -.+...+.+... ..||+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~-~~fDVI 143 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI-KKYDLI 143 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccC-CcCCEE
Confidence 4458999998764 556778888753 999999999888888873221 1222222 122222333222 379996
Q ss_pred -EEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201 267 -FECTGVPSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 267 -id~~g~~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
+|+.-.++..+...++|+++ |.++.-+.
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 56566666788899999998 88876543
No 286
>PLN03139 formate dehydrogenase; Provisional
Probab=95.35 E-value=0.14 Score=48.88 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|+..+ .++.+.+. ..|+|+-
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~------~sDvV~l 261 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP------KCDVVVI 261 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh------hCCEEEE
Confidence 367899999999999999999999999 89999877544444444554321 12322221 3677776
Q ss_pred ccCChhh----H-HHHHHhcccCCeEEEEEc
Q 017201 269 CTGVPSL----L-SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 269 ~~g~~~~----~-~~~~~~l~~~~G~iv~~g 294 (375)
+....+. + ...+..++++ ..++.++
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 6653221 1 2456677775 6666665
No 287
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.096 Score=47.08 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=50.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cC-C--cE-EeCCCCCCcccHHHHHHhhcC--CCCc
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG-M--TD-FINPDDEPNKSISELVKGITH--GMGV 263 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg-~--~~-v~~~~~~~~~~~~~~i~~~~~--~~g~ 263 (375)
+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++ . .. ..|-.+ .+++.+.+..... ..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999998 9999988887778898 89999998887665432 22 1 11 223333 1333333333221 2369
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999874
No 288
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.086 Score=47.51 Aligned_cols=80 Identities=18% Similarity=0.177 Sum_probs=51.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... + .|-.+ .+++.+.+.+... -..+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999988 9999988888888899 999999988765543 3444321 1 23333 2333333333211 1258
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998873
No 289
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.081 Score=46.59 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.++++||+|+ |.+|...++.+...|+ +|+++.+++++. +.... ..|-.+ .+.+.+.+.+.....+.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3678999988 9999988888888898 899999876551 11111 123332 133333344433333689999
Q ss_pred EccCC
Q 017201 268 ECTGV 272 (375)
Q Consensus 268 d~~g~ 272 (375)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 290
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.086 Score=47.22 Aligned_cols=80 Identities=19% Similarity=0.311 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhc-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-HG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..|... . .|-.+ .+++.+.+.+.. .-
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999988 9999988887777899 899999887665432 2223222 1 23333 123333333221 11
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 268999999974
No 291
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.095 Score=47.66 Aligned_cols=79 Identities=13% Similarity=0.270 Sum_probs=48.3
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEEe--CCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI--NPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~--~~~~~~~~~~~~~i~~~~~~ 260 (375)
.++++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ +++|....+ |-.+ .++..+.+.+....
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 5788999998 4 899988877778899 898888765322222 334533222 3332 22333333333221
Q ss_pred -CCccEEEEccC
Q 017201 261 -MGVDYCFECTG 271 (375)
Q Consensus 261 -~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 83 ~g~iD~lVnnAG 94 (271)
T PRK06505 83 WGKLDFVVHAIG 94 (271)
T ss_pred hCCCCEEEECCc
Confidence 26999999987
No 292
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.32 E-value=0.13 Score=45.39 Aligned_cols=79 Identities=11% Similarity=0.146 Sum_probs=49.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCC-CCccEE
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDYC 266 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~d~v 266 (375)
+.++||+|+ |++|...++.+...|+ +|+.+++++++. +.+++.++..+ .|-.+ .++..+.+.+.... .++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999988 9999988887778899 899998876543 33344554322 23322 12333333333221 259999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 293
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.31 E-value=0.16 Score=46.00 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 66889999999999999999999998899999855
No 294
>PRK06849 hypothetical protein; Provisional
Probab=95.30 E-value=0.72 Score=44.32 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=60.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
...+|||+|+ .+.|+..++.++..|. +|+++++++........ .++. .+.....+.+.+.+.+.++....++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 6789999999999999 99999987654432211 2222 2322221235577778777777789999
Q ss_pred EEccCChhhHHHHHHhcccC
Q 017201 267 FECTGVPSLLSEALETTKVG 286 (375)
Q Consensus 267 id~~g~~~~~~~~~~~l~~~ 286 (375)
|-+......+......+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 97765332223333445443
No 295
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.29 E-value=0.15 Score=45.75 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=51.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+... ..|-.+ .+.+.+.+.++.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5789999988 9999988888778899 8999999887765443 223221 123332 1223222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|.+|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 268999999873
No 296
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.094 Score=47.17 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+... ..|-.+ .+.+...+.+... -.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 357999998 9999998888888898 999999887664432 2233321 123222 1223333332211 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|.+.|.
T Consensus 78 ~id~vi~~ag~ 88 (263)
T PRK06181 78 GIDILVNNAGI 88 (263)
T ss_pred CCCEEEECCCc
Confidence 68999999864
No 297
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.14 Score=46.08 Aligned_cols=77 Identities=17% Similarity=0.264 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCcE-E--eCCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTD-F--INPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~~-v--~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+. + .+... + .|-.+ .+++.+.+... +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence 4789999988 9999988887778899 9999999887665432 1 12211 2 22222 12333323222 2
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.+|++|++.|.
T Consensus 81 -~id~lv~~ag~ 91 (259)
T PRK06125 81 -DIDILVNNAGA 91 (259)
T ss_pred -CCCEEEECCCC
Confidence 69999999874
No 298
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.26 E-value=0.098 Score=49.19 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
.+.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999988899898763
No 299
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.11 Score=46.83 Aligned_cols=79 Identities=14% Similarity=0.248 Sum_probs=47.5
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHH---H-hhhcCCcEEe--CCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKE---K-GKAFGMTDFI--NPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Gag---~~G~~ai~la~~~G~~~V~~~~~~~~~~~---~-~~~lg~~~v~--~~~~~~~~~~~~~i~~~~~~ 260 (375)
.|+++||+|++ ++|.+.++.....|+ +|+.++++++..+ . .++++...++ |-.+ .++..+.+.+....
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 57899999873 899988777777898 8988887754322 2 2233322222 2222 23333333332221
Q ss_pred -CCccEEEEccC
Q 017201 261 -MGVDYCFECTG 271 (375)
Q Consensus 261 -~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 26999999886
No 300
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.25 E-value=0.23 Score=44.70 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=68.8
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~ 260 (375)
+.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+.+.+. .+.. ++...
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence 34556678899999999875 77788888876 55 899999999888888776554322 1221 11222
Q ss_pred CCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEE
Q 017201 261 MGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 261 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 293 (375)
..||+|+-... . ...+..+.+.|+|+ |.++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 37999987543 2 23577889999998 988765
No 301
>PLN02244 tocopherol O-methyltransferase
Probab=95.25 E-value=0.059 Score=50.80 Aligned_cols=95 Identities=20% Similarity=0.326 Sum_probs=63.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
+++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++. +.. .++..+. .++ ...+ .
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~-~ 185 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFED-G 185 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCC-C
Confidence 7889999999874 6677888888888 999999999877766542 321 1111111 000 1122 3
Q ss_pred CccEEEEccCC------hhhHHHHHHhcccCCeEEEEEcc
Q 017201 262 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 262 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
.||+|+-.... ...+.++.+.|+++ |+++....
T Consensus 186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 186 QFDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred CccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 69999864331 23678899999998 99987653
No 302
>PRK05717 oxidoreductase; Validated
Probab=95.24 E-value=0.11 Score=46.55 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=50.3
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITHG-MG 262 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~g 262 (375)
..|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... ..|-.+ ..+..+.+.+.... ..
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence 35788999988 9999988887777898 899998877655433 3344221 123222 12232223332211 15
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (255)
T PRK05717 85 LDALVCNAAI 94 (255)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 303
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.082 Score=46.84 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=33.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~ 230 (375)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~ 45 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEK 45 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHH
Confidence 4679999988 9999988888888899 89999998876654
No 304
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.1 Score=47.06 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=51.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cC-CcE---EeCCCCCCcccHHHHHHhhcC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FG-MTD---FINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg-~~~---v~~~~~~~~~~~~~~i~~~~~ 259 (375)
.|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. + .+ ... ..|-.+ .+...+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999988888888899 8999999887765432 1 11 111 123333 1233333333221
Q ss_pred -CCCccEEEEccCC
Q 017201 260 -GMGVDYCFECTGV 272 (375)
Q Consensus 260 -~~g~d~vid~~g~ 272 (375)
-..+|++|++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 1259999999873
No 305
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.12 Score=45.55 Aligned_cols=79 Identities=16% Similarity=0.086 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC--
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-- 259 (375)
.|.++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+.+. ..|-.+ .++..+.+.+...
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999988 8999987777777899 899999888776543 2334322 123222 2333333333222
Q ss_pred CCCccEEEEccC
Q 017201 260 GMGVDYCFECTG 271 (375)
Q Consensus 260 ~~g~d~vid~~g 271 (375)
+..+|++|++.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 126999999986
No 306
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.12 Score=46.00 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=47.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC--CcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--MTD-FINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+ ... ..|-.+ .+++.+.+.+.. . ..|.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~-~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-F-IPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-c-CCCEEE
Confidence 57899988 9999977766667899 8999999988876654432 211 123333 233333333332 2 467776
Q ss_pred EccC
Q 017201 268 ECTG 271 (375)
Q Consensus 268 d~~g 271 (375)
.+.|
T Consensus 77 ~~ag 80 (240)
T PRK06101 77 FNAG 80 (240)
T ss_pred EcCc
Confidence 6664
No 307
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.11 Score=46.18 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc--E-EeCCCCCCcccHHHHHHhhc-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT--D-FINPDDEPNKSISELVKGIT-HG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~--~-v~~~~~~~~~~~~~~i~~~~-~~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+.. . ..|-.+ .+.+...+.+.. ..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999998 9999988887777898 8999998876553332 12221 1 223332 122222222211 11
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 259999999873
No 308
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.18 E-value=0.15 Score=46.92 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
..+.+++|+|+|++|.+++..+...|+++|++++++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999888888888996799999886
No 309
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.17 E-value=0.13 Score=46.74 Aligned_cols=92 Identities=18% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc---CCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---g~~~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
...+.+++|+|+|++|.+.+..+...|+ +|+++++++++.+.+ +.+ +........ + ... ..+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~-~~~ 179 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPL-HRV 179 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcc-cCc
Confidence 3567899999999999988877777898 999999988776543 332 221121110 0 111 258
Q ss_pred cEEEEccCCh--hhH---HHHHHhcccCCeEEEEEc
Q 017201 264 DYCFECTGVP--SLL---SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 264 d~vid~~g~~--~~~---~~~~~~l~~~~G~iv~~g 294 (375)
|+||++++.. +.. ......++++ ..++.+.
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 9999999753 111 1123456665 6666664
No 310
>PRK06194 hypothetical protein; Provisional
Probab=95.17 E-value=0.077 Score=48.49 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h---cCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMTD-FI--NPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. + .+... ++ |-.+ .+++.+.+..... .
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999988 9999988887778898 8999998876654332 2 23322 12 2222 1233332222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 258999999974
No 311
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.17 E-value=0.095 Score=46.76 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=30.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34789999999999999999999999899998865
No 312
>PRK06398 aldose dehydrogenase; Validated
Probab=95.15 E-value=0.03 Score=50.48 Aligned_cols=75 Identities=13% Similarity=0.184 Sum_probs=47.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v 266 (375)
.|.++||+|+ +++|...++.+...|+ +|+.+++++++.. .... ..|-.+ ..++.+.+.+... ...+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999998888888899 8999987765432 1111 123322 1233333333221 1259999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998873
No 313
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.14 E-value=0.76 Score=41.17 Aligned_cols=99 Identities=17% Similarity=0.219 Sum_probs=64.1
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
+.....++++||-+|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+ ... + .. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d------~~~-~-~~-~~~~ 103 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD------IES-L-PL-ATAT 103 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC------ccc-C-cC-CCCc
Confidence 334445678999999975 666666655 476 99999999998888876432 1222111 111 0 11 2236
Q ss_pred ccEEEEccCC------hhhHHHHHHhcccCCeEEEEEcc
Q 017201 263 VDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 263 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
||+|+....- ...+..+.+.|+++ |.++....
T Consensus 104 fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 104 FDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9999865431 23578899999998 98887643
No 314
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.14 E-value=0.1 Score=42.06 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=28.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
..+|+|+|+|++|...+..+...|..+++.++.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999988888888899899999854
No 315
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.11 E-value=0.2 Score=46.57 Aligned_cols=90 Identities=13% Similarity=0.225 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.. +...+... .++.+.+. +.|+|+.
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~-----~~l~e~l~------~aDvvv~ 196 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR-----EELSAFLS------QTRVLIN 196 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc-----ccHHHHHh------cCCEEEE
Confidence 367899999999999999999999999 9999987654321 22222111 12332222 4788888
Q ss_pred ccCChhh----H-HHHHHhcccCCeEEEEEccC
Q 017201 269 CTGVPSL----L-SEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 269 ~~g~~~~----~-~~~~~~l~~~~G~iv~~g~~ 296 (375)
+....+. + ...+..++++ ..++.+|..
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~g-a~lIN~aRG 228 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDG-AYLLNLARG 228 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence 7764322 2 2467778886 877777633
No 316
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.11 E-value=0.14 Score=43.48 Aligned_cols=92 Identities=22% Similarity=0.269 Sum_probs=58.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
++++||=+|+|. |..++.+++.....+|++++.+++..++++ +.+.+. ++.. +..+ + .....+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~------d~~~-~---~~~~~f 110 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG------RAED-F---QHEEQF 110 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec------chhh-c---cccCCc
Confidence 488999999863 666667676654348999999988666553 344432 2222 2211 1 223379
Q ss_pred cEEEEccC--ChhhHHHHHHhcccCCeEEEEE
Q 017201 264 DYCFECTG--VPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 264 d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
|+|+-..- -+..++.+.+.|+++ |+++..
T Consensus 111 D~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 111 DVITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred cEEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 99876531 123566788899998 988866
No 317
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.09 E-value=0.18 Score=46.08 Aligned_cols=82 Identities=17% Similarity=0.322 Sum_probs=54.9
Q ss_pred EEEEECCCHHHHH-HHHHHHHcCCCeEEEEc-CChhh--HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 193 SVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 193 ~VlI~Gag~~G~~-ai~la~~~G~~~V~~~~-~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
+|.|+|+|.+|.. +..+.+.-+. ++.++. .++++ +++++++|.....+ ++...+. ..++|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~----~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA----NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc----CCCCCEEEE
Confidence 6889999999985 4566655566 666554 45544 45677788654432 2222221 237999999
Q ss_pred ccCChhhHHHHHHhcccC
Q 017201 269 CTGVPSLLSEALETTKVG 286 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~ 286 (375)
+++...+.+.+..++..+
T Consensus 71 aTp~~~H~e~a~~al~aG 88 (285)
T TIGR03215 71 ATSAKAHARHARLLAELG 88 (285)
T ss_pred CCCcHHHHHHHHHHHHcC
Confidence 999887777888887774
No 318
>PRK09186 flagellin modification protein A; Provisional
Probab=95.08 E-value=0.15 Score=45.54 Aligned_cols=79 Identities=18% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc----CCc---E-EeCCCCCCcccHHHHHHhhcC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT---D-FINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----g~~---~-v~~~~~~~~~~~~~~i~~~~~ 259 (375)
.+.+|||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ .++ +.. . ..|-.+ .+.+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999988888888899 899999887776443 222 221 1 223333 2233333333221
Q ss_pred -CCCccEEEEccC
Q 017201 260 -GMGVDYCFECTG 271 (375)
Q Consensus 260 -~~g~d~vid~~g 271 (375)
-.++|++|++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 125899999885
No 319
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.086 Score=47.29 Aligned_cols=80 Identities=16% Similarity=0.116 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE---EeCCCCCCcccHHHHHHhhcCC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITHG-M 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~ 261 (375)
+|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++ .+... ..|-.+ .+.+...+.+.... .
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4679999998 9999987777777898 88888888776544333 23221 122222 12233333332221 2
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 68999999983
No 320
>PRK04266 fibrillarin; Provisional
Probab=95.07 E-value=0.35 Score=42.74 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=62.2
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
+..++++|++||=+|+|+ |..+..+++..+..+|++++.+++.++.+. +......+..+. .+.. ....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~~-~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKPE-RYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCcc-hhhhc-c
Confidence 457899999999998863 555666777665338999999997666442 221112221111 1110 00111 1
Q ss_pred CCCccEEEEccCChh----hHHHHHHhcccCCeEEEEE
Q 017201 260 GMGVDYCFECTGVPS----LLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 260 ~~g~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~~ 293 (375)
. .+|+|+.....+. .++.+.+.|+++ |+++..
T Consensus 140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2 5999986544331 367888999998 998874
No 321
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.27 Score=42.88 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=44.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEe--CCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFI--NPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~--~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
.++||+|+ |.+|...+..+... + +|+++++++++.+.+.+ +....++ |-.+ .+.+.+.+... .++|.+|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--PEAIAAAVEQL---GRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--HHHHHHHHHhc---CCCCEEE
Confidence 57999988 99999766655555 6 89999998877654442 2111222 2222 12222222221 2699999
Q ss_pred EccCC
Q 017201 268 ECTGV 272 (375)
Q Consensus 268 d~~g~ 272 (375)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 99874
No 322
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.05 E-value=0.23 Score=46.27 Aligned_cols=106 Identities=15% Similarity=0.074 Sum_probs=65.4
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHhh-hc---CCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201 186 AKVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGK-AF---GMTDFINPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 186 ~~~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~~-~l---g~~~v~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.......+|+|+|+|.+|...++... ..+..+|.+.++++++.+.+. .+ +..... . .+..+.+
T Consensus 120 La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~-----~~~~~av------ 187 (314)
T PRK06141 120 LARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V-----TDLEAAV------ 187 (314)
T ss_pred hCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e-----CCHHHHH------
Confidence 33456789999999999998775444 467669999999988866543 33 322111 1 1222222
Q ss_pred CCccEEEEccCChhh-HHHHHHhcccCCeEEEEEccCCCccccchHH
Q 017201 261 MGVDYCFECTGVPSL-LSEALETTKVGKGKVIVIGVGVDAMVPLNVI 306 (375)
Q Consensus 261 ~g~d~vid~~g~~~~-~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~ 306 (375)
.+.|+|+.++++... +.. ..++++ -.+..+|........++..
T Consensus 188 ~~aDIVi~aT~s~~pvl~~--~~l~~g-~~i~~ig~~~~~~~El~~~ 231 (314)
T PRK06141 188 RQADIISCATLSTEPLVRG--EWLKPG-THLDLVGNFTPDMRECDDE 231 (314)
T ss_pred hcCCEEEEeeCCCCCEecH--HHcCCC-CEEEeeCCCCcccccCCHH
Confidence 268999988876522 222 567886 6666677554334445543
No 323
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.05 E-value=0.16 Score=41.30 Aligned_cols=32 Identities=31% Similarity=0.378 Sum_probs=28.2
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
+|+|+|+|++|...++.+.+.|..+++.++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999998898889998889999855
No 324
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.03 E-value=0.22 Score=46.79 Aligned_cols=87 Identities=17% Similarity=0.347 Sum_probs=56.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++++.. .....+... .++.+.+. ..|+|+-+
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~------~aDiV~l~ 211 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR------ESDFVSLH 211 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh------hCCEEEEe
Confidence 67899999999999999999999999 999998775443 223344321 12222221 36777766
Q ss_pred cCChh----hH-HHHHHhcccCCeEEEEEc
Q 017201 270 TGVPS----LL-SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g 294 (375)
....+ .+ ...+..++++ ..++.++
T Consensus 212 lP~t~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 212 VPLTKETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred CCCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence 65322 11 2456666765 6666665
No 325
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.03 E-value=0.62 Score=36.05 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=59.7
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh
Q 017201 194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 273 (375)
Q Consensus 194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~ 273 (375)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|...+. .+. .+.+ .+++. +-..++.++-+.+++
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~-~~~~---~l~~a-~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDA-TDPE---VLERA-GIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-T-TSHH---HHHHT-TGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccc-hhhh---HHhhc-CccccCEEEEccCCH
Confidence 6788999999999998888665 899999999999999888865443 222 1122 23332 223788888888776
Q ss_pred hhH---HHHHHhcccCCeEEEEE
Q 017201 274 SLL---SEALETTKVGKGKVIVI 293 (375)
Q Consensus 274 ~~~---~~~~~~l~~~~G~iv~~ 293 (375)
..- -...+.+.+. .+++..
T Consensus 74 ~~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 74 EENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 321 2233444554 555544
No 326
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.03 E-value=0.19 Score=44.48 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=30.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|...+..+...|..+++.++.+
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35799999999999998888889999899888744
No 327
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.02 E-value=0.27 Score=36.70 Aligned_cols=85 Identities=22% Similarity=0.325 Sum_probs=53.5
Q ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEE-cCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 193 SVAVLGLGTVGLGAVDGARMHG---AAKIIGI-DKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G---~~~V~~~-~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
+|.|+|+|.+|.+.++-....| . +|+.+ ++++++.+.+ ++++..... .+..+.++ ..|+||
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~------~advvi 66 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ------EADVVI 66 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH------HTSEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc------cCCEEE
Confidence 5788899999998777777777 6 78844 9999988776 456644322 12333333 479999
Q ss_pred EccCChhhHHHHHH---hcccCCeEEEEE
Q 017201 268 ECTGVPSLLSEALE---TTKVGKGKVIVI 293 (375)
Q Consensus 268 d~~g~~~~~~~~~~---~l~~~~G~iv~~ 293 (375)
-|+-.. .+...+. .+.++ ..++.+
T Consensus 67 lav~p~-~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQ-QLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp E-S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred EEECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence 999765 3343333 34454 555544
No 328
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.01 E-value=0.17 Score=44.79 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+... + .|-.+ .+.+.+.+..... .
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999988 9999998888888898 9999999887654432 222221 1 23222 1233333332221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 259999999874
No 329
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.01 E-value=0.17 Score=50.16 Aligned_cols=71 Identities=25% Similarity=0.276 Sum_probs=50.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-----KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
-.+.+|+|+|+|.+|+.++.+++..|+ +|++++.++. ..+.+++.|......... . ...++
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~----------~~~~~ 79 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T----------LPEDT 79 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c----------ccCCC
Confidence 356799999999999999999999999 8999885542 224456678765544322 1 01258
Q ss_pred cEEEEccCCh
Q 017201 264 DYCFECTGVP 273 (375)
Q Consensus 264 d~vid~~g~~ 273 (375)
|+||-+.|-+
T Consensus 80 D~Vv~s~Gi~ 89 (480)
T PRK01438 80 DLVVTSPGWR 89 (480)
T ss_pred CEEEECCCcC
Confidence 8998888754
No 330
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.00 E-value=0.1 Score=45.18 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=30.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|...++.+.+.|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999988888888898789999877
No 331
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.13 Score=45.88 Aligned_cols=80 Identities=21% Similarity=0.310 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ ..++.+.+.+... .
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4789999998 9999987777777898 899999987765432 2333321 1 22222 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 332
>PRK08643 acetoin reductase; Validated
Probab=95.00 E-value=0.15 Score=45.56 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=49.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... . .|-.+ .+.+.+.+.+... ..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568999988 9999988888888899 8999998877654432 223221 1 23322 1223332332211 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 69999999864
No 333
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.97 E-value=0.21 Score=45.60 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=56.9
Q ss_pred CCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 188 VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 188 ~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
.-.|.+|+|+|.|. +|...+.++...|+ +|+++.+.. .++.+.+ +++|++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~------~~aDIv 206 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV------KQADII 206 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh------ccCCEE
Confidence 46889999999976 99999999999999 888886521 1222222 268999
Q ss_pred EEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 267 FECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
|.++|.+..+. .+.++++ ..++.+|...
T Consensus 207 I~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 207 VGAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred EEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 99998775433 3557886 8888887553
No 334
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.97 E-value=0.14 Score=45.92 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=30.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45799999999999999999999999899988754
No 335
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.15 Score=46.53 Aligned_cols=80 Identities=18% Similarity=0.195 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... . .|-.+ .+++.+.+.+... -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4788999988 9999988888788899 899998887665533 2234322 1 23222 1223222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 258999999873
No 336
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.95 E-value=0.16 Score=45.67 Aligned_cols=77 Identities=21% Similarity=0.211 Sum_probs=48.1
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE--eCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGITH-GMGVD 264 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v--~~~~~~~~~~~~~~i~~~~~-~~g~d 264 (375)
++||+|+ +++|...++.....|+ +|+.+++++++.+.+. +.+.... .|-.+ .++..+.+.+... -.++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence 6899988 9999987777777899 8999998877654332 2232122 23222 1233333333221 12699
Q ss_pred EEEEccCC
Q 017201 265 YCFECTGV 272 (375)
Q Consensus 265 ~vid~~g~ 272 (375)
++|++.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99999874
No 337
>PRK01581 speE spermidine synthase; Validated
Probab=94.94 E-value=0.37 Score=45.42 Aligned_cols=103 Identities=12% Similarity=0.019 Sum_probs=64.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-c----EEeCCCCC--CcccHHHHHHhhcCC
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T----DFINPDDE--PNKSISELVKGITHG 260 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~----~v~~~~~~--~~~~~~~~i~~~~~~ 260 (375)
.....+|||+|+| .|.++..++++.+..+|++++.+++-.+.++++.. . ..++.... ...|..+.+.+ ..
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~- 224 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PS- 224 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cC-
Confidence 3445799999976 46677777877666699999999998888885210 0 00000000 01233344443 22
Q ss_pred CCccEEEEccCC-----------hhhHHHHHHhcccCCeEEEEEc
Q 017201 261 MGVDYCFECTGV-----------PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 261 ~g~d~vid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g 294 (375)
..||+||--... .+.+..+.+.|+++ |.++.-.
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 369998654322 23577889999998 9887764
No 338
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.92 E-value=0.31 Score=42.60 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=62.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEe---------CCCCCCcccHHHHHHhh
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFI---------NPDDEPNKSISELVKGI 257 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~---------~~~~~~~~~~~~~i~~~ 257 (375)
..++.+||+.|+|. |.-|+.||. .|. +|++++.++.-.+.+. +.+..... ...+ ..-....+.++
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~D~~~~ 106 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGN--IEIFCGDFFAL 106 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCc--eEEEEccCCCC
Confidence 36788999999974 777888875 698 9999999998777642 22221000 0000 00000011111
Q ss_pred c--CCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEcc
Q 017201 258 T--HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 258 ~--~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
. ....||.|+|...- ...++...++|+|+ |.++.+..
T Consensus 107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1 11258999997641 23577899999998 98666654
No 339
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.91 E-value=0.5 Score=44.08 Aligned_cols=91 Identities=23% Similarity=0.351 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
-.|+++.|+|.|.+|.+.++.++.+|+ +|+..++++. .+..+.+++.++ ++.+.+. ..|++.-
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~------~sDii~l 206 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV---------DLDELLA------ESDIISL 206 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec---------cHHHHHH------hCCEEEE
Confidence 458999999999999999999999999 9999998775 333444555442 1222222 4788755
Q ss_pred cc-CChhh----HHHHHHhcccCCeEEEEEccCC
Q 017201 269 CT-GVPSL----LSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 269 ~~-g~~~~----~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
.. .++++ -...+..++++ +.++.++-..
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~g-a~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPG-AILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCC-eEEEECCCcc
Confidence 54 44432 23578889997 8888887443
No 340
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.91 E-value=0.13 Score=45.87 Aligned_cols=77 Identities=17% Similarity=0.207 Sum_probs=49.7
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE---EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD---FINPDDEPNKSISELVKGITH-GMGVDYC 266 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~d~v 266 (375)
+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ ++... ..|-.+ .+.+.+.+.+... ..++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899998 9999998888888899 89999999887765433 33321 123322 1223333332221 1269999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998863
No 341
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.91 E-value=0.13 Score=45.72 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc--CCc-EEe--CCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF--GMT-DFI--NPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l--g~~-~v~--~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... .+ +.. .++ |-.+ .+...+.+.+... -.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 4679999988 9999987777667798 8999998876654332 22 221 122 3222 1222222222211 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 342
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.90 E-value=0.12 Score=46.34 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=49.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh---hcCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---AFGMTD---FINPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+++++...+..+ ..+.+. ..|-.+ .++..+.+.+... -.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4688999988 9999988888878898 8999988754333332 233322 123332 1233333333221 12
Q ss_pred CccEEEEccC
Q 017201 262 GVDYCFECTG 271 (375)
Q Consensus 262 g~d~vid~~g 271 (375)
++|++|++.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 6999999986
No 343
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.90 E-value=0.21 Score=45.28 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=68.0
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEE-eCCCCCCcccHHHHHHhhc
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDF-INPDDEPNKSISELVKGIT 258 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v-~~~~~~~~~~~~~~i~~~~ 258 (375)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++-.+.+++... ..+ +... ++.. ..+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-----D~~~--~~~- 113 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN-----DILK--KDF- 113 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC-----Cccc--CCC-
Confidence 45667889999999999863 6567777777787 99999999888777765321 111 1111 1110 011
Q ss_pred CCCCccEEEEcc-----C---ChhhHHHHHHhcccCCeEEEEEccC
Q 017201 259 HGMGVDYCFECT-----G---VPSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 259 ~~~g~d~vid~~-----g---~~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
....||+|+..- + ....+..+.+.|+|+ |+++.....
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 223699998521 1 123677889999998 999877543
No 344
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.90 E-value=0.14 Score=45.92 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=47.6
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--E--eCCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Gag---~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
.|+++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... . .|-.+ .++..+.+.+... -.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 57899999874 899987777777899 8999887744333344432211 1 22222 1233333333221 12
Q ss_pred CccEEEEccC
Q 017201 262 GVDYCFECTG 271 (375)
Q Consensus 262 g~d~vid~~g 271 (375)
.+|++|++.|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 6999999887
No 345
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.13 Score=45.97 Aligned_cols=80 Identities=20% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELVKGITHG- 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i~~~~~~- 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+... ..|-.+ .+.+...+.+....
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 5689999988 9999988888888899 89999988876544321 23211 223322 12333333322111
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 258999998864
No 346
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.89 E-value=0.17 Score=46.03 Aligned_cols=80 Identities=20% Similarity=0.207 Sum_probs=58.1
Q ss_pred CCCCEEEEECC-CHHHH-HHHHHHHHcCCCeEEEEcCChhhHHHhh-----hcCCc---EEeCCCCCCcccHHHHHHhhc
Q 017201 189 EKGSSVAVLGL-GTVGL-GAVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGMT---DFINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~-~ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lg~~---~v~~~~~~~~~~~~~~i~~~~ 258 (375)
+-|++.+|.|+ .++|- .|-+||+ .|. +|+.++|+++|++..+ +.++. .++|..+ +++ .-+.+++..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~-~~~-~ye~i~~~l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK-GDE-VYEKLLEKL 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC-Cch-hHHHHHHHh
Confidence 56788999998 89997 5888888 899 8999999999997654 44532 2455554 112 345666666
Q ss_pred CCCCccEEEEccCC
Q 017201 259 HGMGVDYCFECTGV 272 (375)
Q Consensus 259 ~~~g~d~vid~~g~ 272 (375)
.+..+-+.++++|-
T Consensus 123 ~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 123 AGLDVGILVNNVGM 136 (312)
T ss_pred cCCceEEEEecccc
Confidence 66577888999984
No 347
>PLN00203 glutamyl-tRNA reductase
Probab=94.88 E-value=0.16 Score=50.60 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=62.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC-CcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG-MTD-FINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
.+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+. .++ ... +... .+..+.+ . +.|+|
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al----~--~aDVV 333 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA----A--EADVV 333 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH----h--cCCEE
Confidence 3789999999999999999998899878999999988876654 453 221 1111 1222222 1 68999
Q ss_pred EEccCChhh--HHHHHHhccc----CC--eEEEEEccCCC
Q 017201 267 FECTGVPSL--LSEALETTKV----GK--GKVIVIGVGVD 298 (375)
Q Consensus 267 id~~g~~~~--~~~~~~~l~~----~~--G~iv~~g~~~~ 298 (375)
|.+++.+.. ....++.+.+ .+ -.++.++.+.+
T Consensus 334 IsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRd 373 (519)
T PLN00203 334 FTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRN 373 (519)
T ss_pred EEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence 999876532 2233333321 10 15777777753
No 348
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.87 E-value=0.25 Score=44.17 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~ 257 (375)
...+.....+||-+|.+ +|..++.+|+.+ +. +|+.++.++++.+.++ +.|...-+.... .+..+.+.++
T Consensus 73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l 147 (247)
T PLN02589 73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQM 147 (247)
T ss_pred HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHH
Confidence 34456677899999874 588888888876 44 8999999998887764 345422221111 2344445444
Q ss_pred cC----CCCccEEEEccCCh---hhHHHHHHhcccCCeEEEE
Q 017201 258 TH----GMGVDYCFECTGVP---SLLSEALETTKVGKGKVIV 292 (375)
Q Consensus 258 ~~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 292 (375)
.. ...||+||--.... ..++.++++++++ |.++.
T Consensus 148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 32 13799986544332 4577889999997 77653
No 349
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.15 Score=45.98 Aligned_cols=79 Identities=18% Similarity=0.263 Sum_probs=46.8
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE--eCCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.|+++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ ++++...+ .|-.+ .++..+.+.+....
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5788999988 4 799987777777899 888887764222222 22343222 23333 23333333333221
Q ss_pred -CCccEEEEccC
Q 017201 261 -MGVDYCFECTG 271 (375)
Q Consensus 261 -~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 26999999886
No 350
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.86 E-value=0.62 Score=39.68 Aligned_cols=98 Identities=17% Similarity=0.274 Sum_probs=64.1
Q ss_pred hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. + ... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d-----~~~---~ 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E-----API---E 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C-----chh---h
Confidence 3455678899999998864 7777777776643499999999987776643 33322 2221 1 111 1
Q ss_pred hcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201 257 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (375)
+ . ..+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 94 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 L-P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred c-C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 1 1 269999864321 23567889999997 988764
No 351
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.12 Score=46.15 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=49.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..+..+.+.+... -
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999988 9999998888888899 9999998876654332 223221 1 23322 1223322332221 1
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
..+|+++++.+
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 25899999887
No 352
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.85 E-value=0.23 Score=43.90 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=53.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh--cCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA--FGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~--lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.++|+|+|.+|...++.+...|. .|++++.++++.+...+ +....+. +..+ .+ .++++ +=..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~---~~---~L~~a-gi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDATD---ED---VLEEA-GIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecCCC---HH---HHHhc-CCCcCCEEEEe
Confidence 68899999999999999999998 99999999999777333 5554332 2222 22 33333 33379999999
Q ss_pred cCCh
Q 017201 270 TGVP 273 (375)
Q Consensus 270 ~g~~ 273 (375)
++++
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9886
No 353
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.16 Score=45.99 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=33.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~ 229 (375)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~ 45 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLA 45 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence 4689999998 9999999998888999 8999998876643
No 354
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.85 E-value=0.16 Score=47.77 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=31.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999998888888899899999975
No 355
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.84 E-value=0.14 Score=47.77 Aligned_cols=79 Identities=23% Similarity=0.254 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC---Cc-EE--eCCCCCCcccHHHHHHhhc-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MT-DF--INPDDEPNKSISELVKGIT-HG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~~i~~~~-~~ 260 (375)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +++. .. .+ .|-.+ .+.+.+.+.+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999988 9999988887777898 899999888776543 2231 11 11 23322 122222233321 12
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 25999999987
No 356
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.18 Score=45.09 Aligned_cols=73 Identities=18% Similarity=0.329 Sum_probs=45.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEE--eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
.|+++||+|+ |++|...++.+...|+ +|+++++++ ++.+.... +.... .|-.+ .. .+.+.. + ++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~-----~~-~~~~~~-~-~iDi 82 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK-----EE-SLDKQL-A-SLDV 82 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC-----HH-HHHHhc-C-CCCE
Confidence 3689999998 9999998888888898 899988776 22221111 11111 23222 11 222222 2 5999
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|++.|.
T Consensus 83 lVnnAG~ 89 (245)
T PRK12367 83 LILNHGI 89 (245)
T ss_pred EEECCcc
Confidence 9999874
No 357
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.82 E-value=0.12 Score=42.77 Aligned_cols=80 Identities=21% Similarity=0.244 Sum_probs=46.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhc-CC
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGIT-HG 260 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~--~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~-~~ 260 (375)
+++||+|+ +++|...++.....|..+|+.+.++ .++.+.+ +..+... ++ |-.+ .++..+.+.+.. ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence 37899988 9999975555555566588888888 3443322 3344322 22 2222 233333443333 22
Q ss_pred CCccEEEEccCCh
Q 017201 261 MGVDYCFECTGVP 273 (375)
Q Consensus 261 ~g~d~vid~~g~~ 273 (375)
..+|++|.+.|..
T Consensus 79 ~~ld~li~~ag~~ 91 (167)
T PF00106_consen 79 GPLDILINNAGIF 91 (167)
T ss_dssp SSESEEEEECSCT
T ss_pred ccccccccccccc
Confidence 3699999998753
No 358
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.82 E-value=0.17 Score=43.84 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=64.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+.. .++. .+..+.+........+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence 678899999974 7777888887654489999999988887753 2322 1222 1232233322223369
Q ss_pred cEEEEccC--------------ChhhHHHHHHhcccCCeEEEEEc
Q 017201 264 DYCFECTG--------------VPSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 264 d~vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~g 294 (375)
|.|+-... ....++.+.+.|+++ |.++...
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 99875432 134688899999998 9888663
No 359
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.81 E-value=0.22 Score=44.62 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD---FINPDDEPNKSISELVKGITH-GMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g 262 (375)
.|+++||+|+ +++|.+.++.+...|+ +|+.++++... .+.+++.+... ..|-.+ .++..+.+.+... -.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999998888888999 88888765422 22333444322 123333 2333333333221 125
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 360
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.80 E-value=0.18 Score=45.08 Aligned_cols=80 Identities=18% Similarity=0.200 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
+|.+++|+|+ |.+|...++.....|+ +|+.+++++++.+.+ ++.+... . .|-.+ .+++...+.+... -
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5889999988 9999988877777899 899999987665432 2333211 1 23332 1233333333221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|.+|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 361
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.80 E-value=0.021 Score=46.90 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=55.7
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---CcccHHHHHHhhcCCCCccEEEEcc
Q 017201 194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---PNKSISELVKGITHGMGVDYCFECT 270 (375)
Q Consensus 194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~~~~~~~~i~~~~~~~g~d~vid~~ 270 (375)
|+|+|+|++|...+..++..|. +|..+.+++ +.+.+++.|........+. ........ ......+|+||-|+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 6899999999876666666898 899999887 7776665554322111000 00000000 01123799999998
Q ss_pred CCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201 271 GVP---SLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 271 g~~---~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
=+. +.++.....+.+. ..++.+...
T Consensus 76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG 103 (151)
T PF02558_consen 76 KAYQLEQALQSLKPYLDPN-TTIVSLQNG 103 (151)
T ss_dssp SGGGHHHHHHHHCTGEETT-EEEEEESSS
T ss_pred cccchHHHHHHHhhccCCC-cEEEEEeCC
Confidence 554 2344444455554 677766433
No 362
>PLN03075 nicotianamine synthase; Provisional
Probab=94.79 E-value=0.17 Score=46.34 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=64.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcC-----CcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG-----MTDFINPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg-----~~~v~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
.+.++|+-+|+|+.++.++.+++.+. ..+++.++.+++..+.+++.- ...-+.... .+..+. .....+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~---~~~l~~ 195 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV---TESLKE 195 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc---ccccCC
Confidence 37899999999999998888887553 338999999999888876532 111111110 112111 111237
Q ss_pred ccEEEEcc-------CChhhHHHHHHhcccCCeEEEEE
Q 017201 263 VDYCFECT-------GVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 263 ~d~vid~~-------g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
||+||-.+ .-...+....+.|+++ |.++.=
T Consensus 196 FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 196 YDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred cCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 99998765 1124678899999997 776644
No 363
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.17 Score=45.50 Aligned_cols=80 Identities=19% Similarity=0.184 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-----CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKGITH 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~~i~~~~~ 259 (375)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++ +... + .|-.+ .+++...+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4789999988 9999988888888899 8999998877655432 21 2211 1 23322 1233333332211
Q ss_pred -CCCccEEEEccCC
Q 017201 260 -GMGVDYCFECTGV 272 (375)
Q Consensus 260 -~~g~d~vid~~g~ 272 (375)
-..+|++|++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 1269999999873
No 364
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.77 E-value=0.18 Score=44.78 Aligned_cols=79 Identities=25% Similarity=0.201 Sum_probs=50.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-FI--NPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... ++ |..+ .+...+.+.++.. -
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4788999998 9999998888888898 8999988877654432 223211 22 2222 1223333333221 1
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
.++|++|.+.|
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 25899999987
No 365
>PRK08589 short chain dehydrogenase; Validated
Probab=94.75 E-value=0.15 Score=46.25 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-Hhh---hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGK---AFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~---~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ +++|...++.+...|+ +|+.++++ ++.+ .++ +.+... ..|-.+ .++..+.+.+... -
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 5789999988 9999987777777898 89999988 4432 222 223211 123332 1233333333221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 258999998863
No 366
>PRK09242 tropinone reductase; Provisional
Probab=94.74 E-value=0.17 Score=45.34 Aligned_cols=80 Identities=11% Similarity=0.126 Sum_probs=50.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h---c--CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---F--GMTD-F--INPDDEPNKSISELVKGITH 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---l--g~~~-v--~~~~~~~~~~~~~~i~~~~~ 259 (375)
.|+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. + . +... . .|-.+ .++....+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999988 9999998888888899 8999998887654432 1 1 2221 1 23322 1222222222211
Q ss_pred -CCCccEEEEccCC
Q 017201 260 -GMGVDYCFECTGV 272 (375)
Q Consensus 260 -~~g~d~vid~~g~ 272 (375)
-.++|++|.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 1269999999974
No 367
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.71 E-value=0.19 Score=45.32 Aligned_cols=94 Identities=20% Similarity=0.196 Sum_probs=62.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. |.. .++.. +.. .+..... .
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~-~ 111 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLE-T 111 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcC-C
Confidence 5667999998874 7788888875 76 999999999888877642 321 12211 121 1222222 3
Q ss_pred CccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEc
Q 017201 262 GVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 262 g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g 294 (375)
.||+|+.... . ...+..+.+.|+|+ |.++.+-
T Consensus 112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 7999985432 2 23578899999998 9987653
No 368
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.70 E-value=0.2 Score=44.03 Aligned_cols=96 Identities=24% Similarity=0.254 Sum_probs=64.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
-+|.+||=+|+|+ |+++.-+|+. |+ +|++++-+++-.+.++.-.... -+++.. ...+.+.+ .+..||+|
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~--~~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLAS--AGGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHh--cCCCccEE
Confidence 5899999999963 6777777765 57 9999999998888876322211 144543 22333322 22479998
Q ss_pred EE-----ccCChh-hHHHHHHhcccCCeEEEEEc
Q 017201 267 FE-----CTGVPS-LLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 267 id-----~~g~~~-~~~~~~~~l~~~~G~iv~~g 294 (375)
+. .+..++ .+..+.++++|+ |.++..-
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 64 445543 466789999997 8776553
No 369
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.45 Score=42.05 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=46.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKE----KGKAFGMTD-F--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~-~~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
++.++||+|+ |.+|...++.....|+ +|+.+.++.+ +.+ .++..+... . .|-.+ .+++.+.+.+...
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 5689999988 9999998888888899 7777665432 221 222333321 1 22222 1223333322211
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|++|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 1268999998874
No 370
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.2 Score=44.05 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=48.7
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ .+++.+.+.+.. + .+|++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence 5899988 9999988888878898 899999988776544 34444332 23333 123333333332 2 58999988
Q ss_pred cC
Q 017201 270 TG 271 (375)
Q Consensus 270 ~g 271 (375)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 371
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.69 E-value=0.21 Score=47.78 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 66789999999999999999999999899999876
No 372
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.21 Score=46.44 Aligned_cols=40 Identities=30% Similarity=0.346 Sum_probs=33.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~ 230 (375)
.|.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~ 53 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA 53 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 4689999998 9999988777777898 99999998876543
No 373
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.68 E-value=0.15 Score=46.33 Aligned_cols=81 Identities=17% Similarity=0.140 Sum_probs=52.7
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc------EEeCCCCCCcccHHHHHHhh
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT------DFINPDDEPNKSISELVKGI 257 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~------~v~~~~~~~~~~~~~~i~~~ 257 (375)
-.|..+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+... ..+.. .+.|-.+ +++..+.+...
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 46788999988 8999998888889999 9999999988865543 22221 1223322 12332222222
Q ss_pred cC--CCCccEEEEccCC
Q 017201 258 TH--GMGVDYCFECTGV 272 (375)
Q Consensus 258 ~~--~~g~d~vid~~g~ 272 (375)
.. ..+.|+.+++.|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 21 1269999998874
No 374
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.16 Score=45.33 Aligned_cols=78 Identities=18% Similarity=0.163 Sum_probs=47.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v 266 (375)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.. ....... ..|..+ .+++.+.+..... ...+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~~--~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPETV--DGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhhh--cCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999988 9999988888878898 8999998776511 1111211 123322 1233333322211 1258999
Q ss_pred EEccCC
Q 017201 267 FECTGV 272 (375)
Q Consensus 267 id~~g~ 272 (375)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 998873
No 375
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.68 E-value=0.23 Score=45.67 Aligned_cols=92 Identities=17% Similarity=0.263 Sum_probs=56.6
Q ss_pred CEEEEECCCHHHHH-HHHHHHHcCCCeEEEEc-CChh--hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 192 SSVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 192 ~~VlI~Gag~~G~~-ai~la~~~G~~~V~~~~-~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
-+|.|+|.|.+|.. +..+.+.-+. ++.++. .+++ .+++++++|.....+ ++...+ +...-.++|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~~-------~ie~LL-~~~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSAE-------GIDGLL-AMPEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCcccC-------CHHHHH-hCcCCCCCCEEE
Confidence 47899999999986 5555554456 666554 4443 335677788643221 222222 211124799999
Q ss_pred EccCChhhHHHHHHhcccCCeEEEEE
Q 017201 268 ECTGVPSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 268 d~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (375)
++++...+.+.+..++..+ -.++..
T Consensus 76 ~AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred ECCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 9999886777777777764 444443
No 376
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.66 E-value=0.31 Score=44.83 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=47.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~ 272 (375)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.++..
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~aDivi~~vp~ 65 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE------QADVIFTMVPD 65 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh------cCCEEEEecCC
Confidence 37889999999976666667788 89999999999888877765321 11222121 46788887766
Q ss_pred hhhHH
Q 017201 273 PSLLS 277 (375)
Q Consensus 273 ~~~~~ 277 (375)
...+.
T Consensus 66 ~~~~~ 70 (291)
T TIGR01505 66 SPQVE 70 (291)
T ss_pred HHHHH
Confidence 53333
No 377
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.2 Score=44.80 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH-H---hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE-K---GKAFGMTD-F--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
.+.++||+|+ +++|...++.+...|+ +|+.++++.++ .+ . ++..+... . .|-.+ .+++.+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4779999988 9999998888888899 89988876532 12 2 22334221 1 23322 2333333333221
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-..+|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 1258999999974
No 378
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.66 E-value=0.44 Score=43.89 Aligned_cols=56 Identities=23% Similarity=0.232 Sum_probs=47.5
Q ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEe
Q 017201 184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFI 240 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~ 240 (375)
..+.+.||.++||=.. |.+|...+-+|...|+ +++++.. +.||...+++||+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 4567899999999987 9999999999999999 8888875 35788888999997764
No 379
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.36 Score=44.35 Aligned_cols=83 Identities=13% Similarity=0.058 Sum_probs=48.4
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhh
Q 017201 187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE----KGKAFGMTD-F--INPDDEPNKSISELVKGI 257 (375)
Q Consensus 187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~ 257 (375)
..-++.++||+|+ |.+|...++.+...|+ +|+.+.+++++ .+ .++..+... + .|-.+ .+.+.+.+.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i 118 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEET 118 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHH
Confidence 3445789999998 9999987777777898 88888776432 21 222234322 1 23322 12232223222
Q ss_pred cC-CCCccEEEEccCC
Q 017201 258 TH-GMGVDYCFECTGV 272 (375)
Q Consensus 258 ~~-~~g~d~vid~~g~ 272 (375)
.. ..++|++|.+.|.
T Consensus 119 ~~~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 119 VRELGRLDILVNNAAF 134 (290)
T ss_pred HHHcCCCCEEEECCcc
Confidence 11 1268999998864
No 380
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=94.65 E-value=0.65 Score=39.26 Aligned_cols=45 Identities=29% Similarity=0.350 Sum_probs=32.5
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 233 (375)
Q Consensus 186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~ 233 (375)
....++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++
T Consensus 15 l~~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~ 59 (179)
T TIGR00537 15 LRELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRE 59 (179)
T ss_pred HHhcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHH
Confidence 3455678899998863 5666666664 45 89999999988776653
No 381
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.62 E-value=0.3 Score=43.71 Aligned_cols=80 Identities=21% Similarity=0.219 Sum_probs=48.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-F--INPDDEPNKSISELVKGITH-GMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g 262 (375)
.|.++||+|+ |++|...++.+...|+ +|+.+++++.. .+.+++++... . .|-.+ .+++.+.+.+... ..+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 4789999988 9999998888888899 88888754322 22333344321 1 22222 1233333333211 126
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|++.|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 382
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.60 E-value=0.35 Score=45.06 Aligned_cols=39 Identities=28% Similarity=0.433 Sum_probs=32.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~ 231 (375)
.+|.|+|+|.+|..-++.+...|+ +|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999876666667899 999999998766543
No 383
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.21 Score=46.18 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=49.4
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hh----c-CCcE-E--eCCCCCCcccHHHHHHhhc
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA----F-GMTD-F--INPDDEPNKSISELVKGIT 258 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~----l-g~~~-v--~~~~~~~~~~~~~~i~~~~ 258 (375)
..|.+|||+|+ |++|...++.....|+ +|+.++++.++.+.+ +. . +... + .|-.+ .++..+.+.++.
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~ 90 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALR 90 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHH
Confidence 36789999998 9999988777777798 899999887765432 11 1 1111 1 23322 123333333332
Q ss_pred C-CCCccEEEEccC
Q 017201 259 H-GMGVDYCFECTG 271 (375)
Q Consensus 259 ~-~~g~d~vid~~g 271 (375)
. -.++|++|++.|
T Consensus 91 ~~~~~iD~li~nAg 104 (306)
T PRK06197 91 AAYPRIDLLINNAG 104 (306)
T ss_pred hhCCCCCEEEECCc
Confidence 1 126999999987
No 384
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.60 E-value=0.67 Score=42.41 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=46.3
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEeCCC
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPD 243 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~~~~ 243 (375)
....++||++|+=-=+|..|.+.+.+|+..|+ +++.+.. +++|.++++.+|+..+..+.
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45669999965554449999999999999999 5655543 57889999999998876655
No 385
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.56 E-value=0.22 Score=45.28 Aligned_cols=79 Identities=24% Similarity=0.208 Sum_probs=49.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. ..+... . .|-.+ ..+....+.+... -
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4788999988 9999988888888899 8999998876554322 223221 1 23222 1223333332221 1
Q ss_pred CCccEEEEccC
Q 017201 261 MGVDYCFECTG 271 (375)
Q Consensus 261 ~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 26999999987
No 386
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.24 Score=44.39 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=48.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC---CcE-EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG---MTD-FINPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg---~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. .+. +.. ..|-.+ .+.+...+.+... -.++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999998 9999987777777898 8999998887765432 221 211 123322 1222223322211 1258
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999974
No 387
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.55 E-value=0.25 Score=45.15 Aligned_cols=87 Identities=17% Similarity=0.252 Sum_probs=55.7
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~ 272 (375)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|..... . .+. +.+ .+.|+||-|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~------~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL------KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh------cCCCEEEEcCCH
Confidence 68899999999877777677788 899999999988888777742111 1 111 111 258999998875
Q ss_pred hhh---HHHHHHhcccCCeEEEEEc
Q 017201 273 PSL---LSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 273 ~~~---~~~~~~~l~~~~G~iv~~g 294 (375)
... ++.....+.++ ..+..++
T Consensus 68 ~~~~~~~~~l~~~l~~~-~ii~d~~ 91 (279)
T PRK07417 68 GLLLPPSEQLIPALPPE-AIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHHhCCCC-cEEEeCc
Confidence 422 23333444544 4444444
No 388
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.22 Score=45.32 Aligned_cols=78 Identities=19% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--c-EE--eCCCCCCcccHHHHHHhhcC-
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-DF--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~-~v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+. . .+ .|..+ .+++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999998 9999988888778899 8999998877654432 2221 1 11 23333 223333 333221
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 1268999999864
No 389
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.25 Score=44.76 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=49.4
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCc--E-EeCCCCCCcccHHHHHHhhc-CCCCccE
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMT--D-FINPDDEPNKSISELVKGIT-HGMGVDY 265 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~--~-v~~~~~~~~~~~~~~i~~~~-~~~g~d~ 265 (375)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++. +.. . ..|-.+ .+.+.+.+.+.. ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999988 9999987777777898 899999988776655432 221 1 123322 122333333221 1226899
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|++.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999863
No 390
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.51 E-value=0.22 Score=45.32 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=62.7
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHh-hhcCCcEE--eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG-KAFGMTDF--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~~---~~~~~-~~lg~~~v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
.|+++||+|+ +++|.+.++.+...|+ +|+.+.++.+ +.+.+ ++++.... .|-.+ .+...+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999987 4899988877777899 8988887742 22222 33443222 23333 2333333333322
Q ss_pred CCCccEEEEccCCh--------------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201 260 GMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 260 ~~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
...+|++|++.|.. + ..+.++..+..+ |+++.++...
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 12699999998731 0 223455566666 8888886543
No 391
>PRK06720 hypothetical protein; Provisional
Probab=94.51 E-value=0.28 Score=41.23 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=48.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhc-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-HG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~ 260 (375)
++..++|.|+ +++|...+......|+ +|+.++++.+..+.. ++.+... + .|..+ .+++.+.+.+.. .-
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK--QGDWQRVISITLNAF 91 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999988 8899987777777898 899999876654322 2234322 1 22222 122222222211 11
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|++.|.
T Consensus 92 G~iDilVnnAG~ 103 (169)
T PRK06720 92 SRIDMLFQNAGL 103 (169)
T ss_pred CCCCEEEECCCc
Confidence 268999988774
No 392
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.51 E-value=0.2 Score=44.26 Aligned_cols=69 Identities=25% Similarity=0.322 Sum_probs=49.1
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
|+|+|+ |.+|...++.+...+. +|.++.++..+ .+.+++.|+..+. |..+ . +.+.+... |+|.||.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~---~---~~l~~al~--g~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD---P---ESLVAALK--GVDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT----H---HHHHHHHT--TCSEEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC---H---HHHHHHHc--CCceEEee
Confidence 789998 9999999988888888 89999988643 4556778887553 2222 2 22322222 79999998
Q ss_pred cC
Q 017201 270 TG 271 (375)
Q Consensus 270 ~g 271 (375)
.+
T Consensus 72 ~~ 73 (233)
T PF05368_consen 72 TP 73 (233)
T ss_dssp SS
T ss_pred cC
Confidence 88
No 393
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.49 E-value=0.68 Score=40.64 Aligned_cols=116 Identities=9% Similarity=-0.052 Sum_probs=64.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi 267 (375)
..+.+|||+|+|.++.-=++.+...|+ +|++++..-. ....+.+.+....+ .+++...+ + .++++||
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~d----l------~g~~LVi 90 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKEF----I------KDKHLIV 90 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChHH----h------CCCcEEE
Confidence 357899999999999887777778898 8888875432 22222223332222 12211111 1 2789999
Q ss_pred EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201 268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT 318 (375)
Q Consensus 268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (375)
-+++.+ .++..+...+...+.++...... ...++-...++.+ .+++.-|
T Consensus 91 aATdD~-~vN~~I~~~a~~~~~lvn~vd~p-~~~dFi~PAiv~rg~l~IaIS 140 (223)
T PRK05562 91 IATDDE-KLNNKIRKHCDRLYKLYIDCSDY-KKGLCIIPYQRSTKNFVFALN 140 (223)
T ss_pred ECCCCH-HHHHHHHHHHHHcCCeEEEcCCc-ccCeEEeeeEEecCCEEEEEE
Confidence 999887 55555555543225555554322 2233333334434 3555444
No 394
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.52 Score=42.03 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=29.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK 228 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~ 228 (375)
.+.++||+|+ |++|...++.+...|+ +|+.+. +++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4689999988 9999998888888898 787764 444443
No 395
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.48 E-value=0.26 Score=44.00 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... . .|-.+ .+.+.+.+..... .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4778999988 9999988887778898 899999887765433 2223221 1 23332 1233333322211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 269999999974
No 396
>PRK08328 hypothetical protein; Provisional
Probab=94.48 E-value=0.24 Score=43.88 Aligned_cols=35 Identities=31% Similarity=0.438 Sum_probs=30.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999899998854
No 397
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.47 E-value=0.15 Score=45.30 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++...+ ++.+... ++ |-.+ .+.+.+.+.+... -
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 4678999998 9999988877777898 899999886654332 2233221 12 3222 1223333322221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.+.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 258999999854
No 398
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.47 E-value=0.24 Score=44.30 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=48.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~ 265 (375)
.+.++||+|+ |++|...++.+...|+ +|+.+.++ ++..+.++..+...+ .|-.+ .++..+.+.+... -.++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4688999988 9999998888878898 78776544 333344443343222 23333 2333333333221 126999
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 399
>PLN02928 oxidoreductase family protein
Probab=94.45 E-value=0.32 Score=45.97 Aligned_cols=96 Identities=20% Similarity=0.364 Sum_probs=59.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-----CcEEeCC-CCCCcccHHHHHHhhcCCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----MTDFINP-DDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----~~~v~~~-~~~~~~~~~~~i~~~~~~~g 262 (375)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.+++..+... ..++ ...+.+. .. ..++.+.+. .
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~L~ell~------~ 226 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGG--HEDIYEFAG------E 226 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCc--ccCHHHHHh------h
Confidence 357899999999999999999999999 99999876332211 1110 0001100 01 023333332 4
Q ss_pred ccEEEEccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201 263 VDYCFECTGVPS----LL-SEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 263 ~d~vid~~g~~~----~~-~~~~~~l~~~~G~iv~~g~ 295 (375)
.|+|+.+....+ .+ ...+..++++ ..++.++.
T Consensus 227 aDiVvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 227 ADIVVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred CCEEEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 799888875321 12 3677888887 88888763
No 400
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.44 E-value=0.38 Score=48.62 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=56.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 271 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g 271 (375)
++++|.|.|.+|...++..+..|. .+++++.++++.+.+++.|...+.-... +++. +++ .+=..+|.++-+++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~--~~~~---L~~-a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA--NEEI---MQL-AHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC--CHHH---HHh-cCccccCEEEEEcC
Confidence 689999999999999999999998 8999999999999999888765542221 1222 222 22237888877776
Q ss_pred Ch
Q 017201 272 VP 273 (375)
Q Consensus 272 ~~ 273 (375)
++
T Consensus 491 ~~ 492 (558)
T PRK10669 491 NG 492 (558)
T ss_pred Ch
Confidence 64
No 401
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.44 E-value=0.2 Score=43.24 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|.-.++.+-..|..+++.++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 56789999999999999999999999889999854
No 402
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.44 E-value=0.22 Score=44.65 Aligned_cols=79 Identities=20% Similarity=0.223 Sum_probs=48.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h----cCC--cEEe--CCCCCCcccHHHHHHhhcC-
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGM--TDFI--NPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lg~--~~v~--~~~~~~~~~~~~~i~~~~~- 259 (375)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. + .+. ...+ |-.+ .++....+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 568999988 9999988877777898 8999998876554332 1 221 1111 3222 1223322322211
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-..+|++|++.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 1268999998873
No 403
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.40 E-value=0.24 Score=43.75 Aligned_cols=80 Identities=11% Similarity=0.224 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +..+... ++ |-.+ ...+.+.+.+... -
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999988 9999988887778899 999999987665432 2223222 11 2222 1233333333221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (239)
T PRK07666 83 GSIDILINNAGI 94 (239)
T ss_pred CCccEEEEcCcc
Confidence 268999998864
No 404
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.39 E-value=0.86 Score=35.43 Aligned_cols=90 Identities=19% Similarity=0.313 Sum_probs=60.6
Q ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 193 SVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
+|+|+|+|.+|.....-.+.. +. +++ ++++++++.+. .++++.. .+. ++.+.+.. .++|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~-------~~~~ll~~----~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYT-------DLEELLAD----EDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EES-------SHHHHHHH----TTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chh-------HHHHHHHh----hcCCEEEE
Confidence 688999999998776555544 44 555 45566666655 4567777 332 23333322 27999999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++....+.+.+..++..+ +-+.+..+.
T Consensus 69 ~tp~~~h~~~~~~~l~~g--~~v~~EKP~ 95 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAG--KHVLVEKPL 95 (120)
T ss_dssp ESSGGGHHHHHHHHHHTT--SEEEEESSS
T ss_pred ecCCcchHHHHHHHHHcC--CEEEEEcCC
Confidence 999887888888888875 456665443
No 405
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.22 Score=44.77 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITH-GM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~ 261 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+++ .+... ..|-.+ .+++.+.+.+... -.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4689999988 9999988888888899 89999887654333322 23221 123322 1222222222211 12
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 58999998873
No 406
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.37 E-value=0.55 Score=42.69 Aligned_cols=102 Identities=12% Similarity=0.007 Sum_probs=60.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCC--CcccHHHHHHhhcCCCCcc
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDE--PNKSISELVKGITHGMGVD 264 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~--~~~~~~~~i~~~~~~~g~d 264 (375)
...++||++|+|. |..+..++++....++++++.+++-.+.+++.-. ...++.... ...+..+.+++. ...||
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~--~~~yD 147 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT--ENTFD 147 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC--CCCcc
Confidence 3456999998865 5456677776656689999999877776665210 000100000 001233333332 23799
Q ss_pred EEEEccC----------ChhhHHHHHHhcccCCeEEEEEc
Q 017201 265 YCFECTG----------VPSLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 265 ~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~g 294 (375)
+||-... ..+.++.+.+.|+++ |.++...
T Consensus 148 vIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 148 VIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 9865332 223567888999998 9988763
No 407
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.36 E-value=0.27 Score=44.07 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++... ..|-.+ .++..+.+.+... ...+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3678999998 9999988888888899 8999999887765443 233211 122222 1233333332211 1258
Q ss_pred cEEEEccC
Q 017201 264 DYCFECTG 271 (375)
Q Consensus 264 d~vid~~g 271 (375)
|++|.+.+
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999886
No 408
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.35 E-value=0.52 Score=43.40 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=47.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~ 272 (375)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+ ...|+||.++..
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~------~~~d~vi~~vp~ 68 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVA------EQCDVIITMLPN 68 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHH------hcCCEEEEeCCC
Confidence 68999999999876666666788 89999999988887776665321 1122211 146788777765
Q ss_pred hhhHH
Q 017201 273 PSLLS 277 (375)
Q Consensus 273 ~~~~~ 277 (375)
.....
T Consensus 69 ~~~~~ 73 (296)
T PRK11559 69 SPHVK 73 (296)
T ss_pred HHHHH
Confidence 44333
No 409
>PLN02253 xanthoxin dehydrogenase
Probab=94.35 E-value=0.22 Score=45.32 Aligned_cols=80 Identities=19% Similarity=0.124 Sum_probs=48.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC----cE-EeCCCCCCcccHHHHHHhhcCC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM----TD-FINPDDEPNKSISELVKGITHG-M 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~----~~-v~~~~~~~~~~~~~~i~~~~~~-~ 261 (375)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ..++. .. ..|-.+ .+.+.+.+...... .
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4688999988 9999987777777898 899998876654332 22321 11 123332 12333333322111 2
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 59999998863
No 410
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.22 Score=45.23 Aligned_cols=79 Identities=11% Similarity=0.108 Sum_probs=49.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD-F--INPDDEPNKSISELVKGITH-GMGVD 264 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~d 264 (375)
+.+|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ ++... . .|..+ .+.+...+..... -.++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999998 9999988777777798 89999998877655433 22111 1 22222 1223222222211 12689
Q ss_pred EEEEccCC
Q 017201 265 YCFECTGV 272 (375)
Q Consensus 265 ~vid~~g~ 272 (375)
.+|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 411
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.33 E-value=0.19 Score=44.36 Aligned_cols=101 Identities=24% Similarity=0.326 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
....++++++||=+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+ ... + .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~-~-~ 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN------AME-L-P 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec------hhc-C-C
Confidence 455778999999999864 6677788887642 289999999887766653 22221 22111 110 0 1
Q ss_pred hcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201 257 ITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 257 ~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
. ....+|+|+-+.. . ...+..+.+.|+++ |.++....
T Consensus 110 ~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 110 F-DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred C-CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 1 2236999875422 1 23577889999997 99987643
No 412
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.33 E-value=0.43 Score=43.16 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcC-------Cc--EEeCCCCCCcccHHHH
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFG-------MT--DFINPDDEPNKSISEL 253 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg-------~~--~v~~~~~~~~~~~~~~ 253 (375)
+..+++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++.. .. .++..+. .+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~---- 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TD---- 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---cc----
Confidence 345778999999999864 6677788887652 38999999998887775321 11 1121111 01
Q ss_pred HHhhcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEccCC
Q 017201 254 VKGITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 254 i~~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+ .+ ....||.|+-+.+ . ...+.++.+.|+|+ |+++.+....
T Consensus 139 l-p~-~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 139 L-PF-DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred C-CC-CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 1 11 2236999875432 1 23688999999998 9998875443
No 413
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.24 Score=44.00 Aligned_cols=78 Identities=17% Similarity=0.228 Sum_probs=48.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----c--CCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--GMTD-F--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--g~~~-v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ . +... + .|..+ .+++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 568999988 9999976666666788 89999988877654321 1 2111 1 23333 2233333333221
Q ss_pred CCCccEEEEccC
Q 017201 260 GMGVDYCFECTG 271 (375)
Q Consensus 260 ~~g~d~vid~~g 271 (375)
-.++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 126999999886
No 414
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.31 E-value=0.19 Score=45.60 Aligned_cols=79 Identities=24% Similarity=0.246 Sum_probs=48.2
Q ss_pred CCCCCEEEEECC-CHHHHH-HHHHHHHcCCCeEEEEcCChhhH----HHhhhcC-C-cEEeCCCCCCcccHH---HHHHh
Q 017201 188 VEKGSSVAVLGL-GTVGLG-AVDGARMHGAAKIIGIDKNPWKK----EKGKAFG-M-TDFINPDDEPNKSIS---ELVKG 256 (375)
Q Consensus 188 ~~~g~~VlI~Ga-g~~G~~-ai~la~~~G~~~V~~~~~~~~~~----~~~~~lg-~-~~v~~~~~~~~~~~~---~~i~~ 256 (375)
--.|+.|||+|+ +++|.+ |.++|+ .|+ +++..+.+++.. +.+++.| + .+..|-.+ .++.. +.+++
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~-rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAK-RGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKK 110 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHH-hCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 357899999988 899985 555555 566 788888765443 3444444 2 22334333 13333 33433
Q ss_pred hcCCCCccEEEEccCC
Q 017201 257 ITHGMGVDYCFECTGV 272 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~ 272 (375)
.-+ .+|++++++|-
T Consensus 111 e~G--~V~ILVNNAGI 124 (300)
T KOG1201|consen 111 EVG--DVDILVNNAGI 124 (300)
T ss_pred hcC--CceEEEecccc
Confidence 332 69999999873
No 415
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.30 E-value=0.15 Score=46.29 Aligned_cols=46 Identities=17% Similarity=0.096 Sum_probs=38.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
+...+++++|+|+|+.+.+++..++..|+.+|+++.++++|.+.+.
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la 163 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA 163 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 4455679999999999999888888899878999999998876554
No 416
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.30 E-value=0.39 Score=46.82 Aligned_cols=105 Identities=12% Similarity=0.160 Sum_probs=65.6
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKG 256 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~ 256 (375)
....+++|++||=+|+|+ |..+.++++..+..+|++++.++++.+.++ .+|... + .+.+. ... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~~ 303 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----SQ 303 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----cc
Confidence 456788999999998754 445556666665339999999999987654 456542 2 22111 111 00
Q ss_pred hcCCCCccEEEE---ccCC-------------------------hhhHHHHHHhcccCCeEEEEEccCC
Q 017201 257 ITHGMGVDYCFE---CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 257 ~~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
......||.||- |+|. ...+..++++|+++ |+++..-.+-
T Consensus 304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs~ 371 (426)
T TIGR00563 304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCSV 371 (426)
T ss_pred cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCCC
Confidence 112336999863 3432 13567799999998 9988664443
No 417
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.29 E-value=0.27 Score=47.33 Aligned_cols=82 Identities=21% Similarity=0.271 Sum_probs=51.4
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-------Hhhhc-CCcEE-eCCCCCCcccHHHHHH
Q 017201 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-------KGKAF-GMTDF-INPDDEPNKSISELVK 255 (375)
Q Consensus 186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~~i~ 255 (375)
.....+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+ ..... ++..+ .|..+ .+.+.+.++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 34567789999998 9999998888888898 8999998765431 11112 23322 23333 122333333
Q ss_pred hhcCCCCccEEEEccCC
Q 017201 256 GITHGMGVDYCFECTGV 272 (375)
Q Consensus 256 ~~~~~~g~d~vid~~g~ 272 (375)
.. +.++|+||+|.+.
T Consensus 132 ~~--~~~~D~Vi~~aa~ 146 (390)
T PLN02657 132 SE--GDPVDVVVSCLAS 146 (390)
T ss_pred Hh--CCCCcEEEECCcc
Confidence 22 1169999998864
No 418
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.28 E-value=0.24 Score=43.31 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=30.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 55789999999999988888888899889999876
No 419
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.28 E-value=0.33 Score=43.20 Aligned_cols=42 Identities=26% Similarity=0.261 Sum_probs=34.8
Q ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201 187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229 (375)
Q Consensus 187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~ 229 (375)
...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~ 50 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLE 50 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHH
Confidence 4568899999988 9999987777777898 9999998876643
No 420
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.26 E-value=0.23 Score=44.43 Aligned_cols=80 Identities=16% Similarity=0.089 Sum_probs=49.6
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc--CCcEE-eCCCCCCcccHHHHHHhhcCCC
Q 017201 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMTDF-INPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
+.-..+.+|||+|+ |.+|...++.+...|+ +|+++.+++++....... ++..+ .|..+ . . ..+.+... .
T Consensus 12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~-~-~~l~~~~~-~ 84 (251)
T PLN00141 12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G-S-DKLVEAIG-D 84 (251)
T ss_pred cccccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C-H-HHHHHHhh-c
Confidence 33445689999998 9999988887777898 899998887765433211 23222 23222 1 1 12222221 2
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|+||.+.|.
T Consensus 85 ~~d~vi~~~g~ 95 (251)
T PLN00141 85 DSDAVICATGF 95 (251)
T ss_pred CCCEEEECCCC
Confidence 69999988764
No 421
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.24 E-value=0.56 Score=42.78 Aligned_cols=87 Identities=23% Similarity=0.225 Sum_probs=58.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 271 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g 271 (375)
+|.++|.|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...-+ ..+.+. ..|+||-++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s--------~~eaa~------~aDvVitmv~ 66 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS--------PAEAAA------EADVVITMLP 66 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC--------HHHHHH------hCCEEEEecC
Confidence 67889999999976666667788 99999999999 88888888764321 222221 4778887777
Q ss_pred ChhhHHHHH-------HhcccCCeEEEEEcc
Q 017201 272 VPSLLSEAL-------ETTKVGKGKVIVIGV 295 (375)
Q Consensus 272 ~~~~~~~~~-------~~l~~~~G~iv~~g~ 295 (375)
+++.....+ ..++++ ..++.++.
T Consensus 67 ~~~~V~~V~~g~~g~~~~~~~G-~i~IDmST 96 (286)
T COG2084 67 DDAAVRAVLFGENGLLEGLKPG-AIVIDMST 96 (286)
T ss_pred CHHHHHHHHhCccchhhcCCCC-CEEEECCC
Confidence 765544433 233454 56665543
No 422
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.24 E-value=0.74 Score=40.12 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=60.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
+++|++||=+|+|+ |..+..+++..+. .+|++++.++.. ..-++ .++..+- ........+.+......+|+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~-~~~~~~~~i~~~~~~~~~D~V 121 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDF-RDELVLKALLERVGDSKVQVV 121 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence 58899999999864 5566666676653 389999987621 11122 2332221 112233444443344579999
Q ss_pred EEcc-----CC------------hhhHHHHHHhcccCCeEEEEE
Q 017201 267 FECT-----GV------------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 267 id~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
+... +. ...++.+.+.|+++ |.++..
T Consensus 122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 8644 22 12567889999998 988874
No 423
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.22 E-value=0.25 Score=44.09 Aligned_cols=80 Identities=23% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++.+|||+|+ |.+|...++.....|+ +|+++++++++.+.+. +.+... ..|-.+ .+++.+.+.++.. .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4679999998 9999988887777898 8999999887765432 223221 123332 1223232322211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.+.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 269999998863
No 424
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.22 E-value=0.32 Score=44.22 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=48.6
Q ss_pred CCCCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHh-hhcCCcEE--eCCCCCCcccHHHHHHhhc
Q 017201 188 VEKGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT 258 (375)
Q Consensus 188 ~~~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~lg~~~v--~~~~~~~~~~~~~~i~~~~ 258 (375)
.-.|+++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++.... .|-.+ .++..+.+.++.
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~ 83 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLE 83 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHH
Confidence 446789999987 5899987777777899 888887653 233222 33453222 23222 233333333332
Q ss_pred CC-CCccEEEEccC
Q 017201 259 HG-MGVDYCFECTG 271 (375)
Q Consensus 259 ~~-~g~d~vid~~g 271 (375)
.. ..+|++|++.|
T Consensus 84 ~~~g~iD~lv~nAG 97 (272)
T PRK08159 84 KKWGKLDFVVHAIG 97 (272)
T ss_pred HhcCCCcEEEECCc
Confidence 21 26999999986
No 425
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.20 E-value=0.27 Score=44.32 Aligned_cols=80 Identities=14% Similarity=0.227 Sum_probs=46.9
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE--eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
+|.++||+|+ +++|.+.++.+...|+ +|+.+.+++...+.++ +++.... .|-.+ .++..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence 5789999984 5899987777777899 8888765532222222 2232222 23322 2333333333322
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
..++|++|++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 1269999999863
No 426
>PRK06484 short chain dehydrogenase; Validated
Probab=94.18 E-value=0.24 Score=49.50 Aligned_cols=80 Identities=20% Similarity=0.273 Sum_probs=53.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
+|+++||+|+ +++|...++.+...|+ +|+.++++.++.+.+ ++++... ..|-.+ .+++.+.+.+... ..++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999988 9999998888888899 999999888876544 3455322 233333 2333333333221 1269
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999864
No 427
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.17 E-value=0.59 Score=42.95 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=33.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~ 231 (375)
.+|.|+|+|.+|...++.+...|. +|+..+.++++.+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 579999999999987777777898 899999999887654
No 428
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.3 Score=44.44 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=47.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcCCCCc
Q 017201 191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
+++++|.|+|++|...++.+. .|+ +|+.+++++++.+.+ +..+... + .|-.+ .+.+.+.+.+...-.++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 356788899999998777664 688 999999887665433 2223321 1 23333 23333333332111269
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999974
No 429
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.15 E-value=0.27 Score=45.62 Aligned_cols=96 Identities=11% Similarity=0.114 Sum_probs=55.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEeCCCCCCcccHHHHHHhhc--CCCCccEEEE
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGIT--HGMGVDYCFE 268 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~~i~~~~--~~~g~d~vid 268 (375)
.+|+|+|+|++|....-.+...|. .|+.+++++++.+.+++- |.. +..... .... ...... ....+|+||-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~~~~-~~~~~~~~~~~~~D~viv 76 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---ASLY-AIPAETADAAEPIHRLLL 76 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---ceee-ccCCCCcccccccCEEEE
Confidence 369999999999865555555687 899999887777766543 432 211111 0000 000000 1126899998
Q ss_pred ccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201 269 CTGVP---SLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 269 ~~g~~---~~~~~~~~~l~~~~G~iv~~g 294 (375)
|+=+. +.+......+.++ ..++.+.
T Consensus 77 ~vK~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 77 ACKAYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred ECCHHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 87433 2344455556666 6666664
No 430
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.33 Score=43.05 Aligned_cols=38 Identities=11% Similarity=0.219 Sum_probs=32.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201 192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230 (375)
Q Consensus 192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~ 230 (375)
.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 47899988 9999988887778898 89999998876643
No 431
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.14 E-value=0.25 Score=47.62 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=47.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC--CcE-EeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG--MTD-FINPDDEPNKSISELVKGITHGMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d 264 (375)
.|++++|+|+ |++|.+.++.....|+ +|+++++++++.+... ... ... ..|-.+ . +.+.+..+ ++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l~--~ID 247 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELLE--KVD 247 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHhC--CCC
Confidence 4789999998 9999988887777898 8999988876653221 111 111 123322 1 12222222 699
Q ss_pred EEEEccCC
Q 017201 265 YCFECTGV 272 (375)
Q Consensus 265 ~vid~~g~ 272 (375)
++|++.|.
T Consensus 248 iLInnAGi 255 (406)
T PRK07424 248 ILIINHGI 255 (406)
T ss_pred EEEECCCc
Confidence 99998763
No 432
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.09 E-value=0.57 Score=43.87 Aligned_cols=95 Identities=19% Similarity=0.078 Sum_probs=61.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCC----C-CcccHHHHHHhhcCCCCccE
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDD----E-PNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~----~-~~~~~~~~i~~~~~~~g~d~ 265 (375)
.+|.|+|+|.+|.+.+..+...|. +|+..++++++.+.+.+.+..... +... . ...+..+.+ ...|+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~------~~aD~ 77 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL------AGADF 77 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH------cCCCE
Confidence 479999999999987777777788 899999988887766543211000 0000 0 001222221 15899
Q ss_pred EEEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201 266 CFECTGVPSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
||-++.+. .+...+..++++ -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999887 567787888886 66665643
No 433
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.52 Score=43.13 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=29.3
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
-.+.++||+|+ +++|...++.+...|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 45789999988 9999987777777898 888887654
No 434
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.06 E-value=0.21 Score=47.23 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=47.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC----CcEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITHGMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~~i~~~~~~~g 262 (375)
.|.+|||+|+ |.+|...++.+...|+ +|++++++++..... ..++ ...+ .|-.+ . +.+.++....+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~---~~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---A---AKLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---H---HHHHHHHhhcC
Confidence 4689999988 9999998888888898 899998776543221 1121 1111 12222 1 12333322336
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|+||++.+.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999999873
No 435
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.05 E-value=0.29 Score=45.85 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=61.3
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
-.+.+|+|+|+ |.+|..+++.+. ..|.++++.+.+++++...+. +++...+ .++. +... +.|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~l~----~~l~--~aDi 218 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LSLE----EALP--EADI 218 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------HhHH----HHHc--cCCE
Confidence 46789999999 999987776665 457669999998887776553 3321111 1222 2222 5899
Q ss_pred EEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201 266 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
|+.+++.+..+..--..+++. -.++.++.+.+
T Consensus 219 Vv~~ts~~~~~~I~~~~l~~~-~~viDiAvPRD 250 (340)
T PRK14982 219 VVWVASMPKGVEIDPETLKKP-CLMIDGGYPKN 250 (340)
T ss_pred EEECCcCCcCCcCCHHHhCCC-eEEEEecCCCC
Confidence 999998754421111344665 78888887764
No 436
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.04 E-value=0.37 Score=43.59 Aligned_cols=79 Identities=16% Similarity=0.228 Sum_probs=46.4
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEE--eCCCCCCcccHHHHHHhhcCC
Q 017201 190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDF--INPDDEPNKSISELVKGITHG 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~~i~~~~~~ 260 (375)
.|+++||+|+ + ++|.+.++.....|+ +|+.+.+++...+.+++ .+.... .|-.+ .+++.+.+.+....
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 5789999988 3 799987777777898 88888776321122222 222112 23322 23344444333221
Q ss_pred -CCccEEEEccC
Q 017201 261 -MGVDYCFECTG 271 (375)
Q Consensus 261 -~g~d~vid~~g 271 (375)
..+|++|++.|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 25899999997
No 437
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.03 E-value=0.45 Score=43.43 Aligned_cols=101 Identities=13% Similarity=0.104 Sum_probs=65.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-E--EeCCCC-CCcccHHHHHHhhcCCCCc
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-D--FINPDD-EPNKSISELVKGITHGMGV 263 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~--v~~~~~-~~~~~~~~~i~~~~~~~g~ 263 (375)
.+| .+|||+|+|. |-.+-.++|+....++++++.+++=.++++++=.. . ..|++- ....|-.+.+++... +|
T Consensus 75 ~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~--~f 150 (282)
T COG0421 75 PNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE--KF 150 (282)
T ss_pred CCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC--cC
Confidence 344 6999997763 55677888888888999999999988888763211 0 001110 001234445554433 79
Q ss_pred cEEE-EccCC---------hhhHHHHHHhcccCCeEEEEE
Q 017201 264 DYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 264 d~vi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
|+|| |+... .+..+..-++|+++ |.++.-
T Consensus 151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 9974 44432 34678899999998 888776
No 438
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.02 E-value=0.6 Score=43.81 Aligned_cols=87 Identities=23% Similarity=0.263 Sum_probs=57.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++++..... .. .. .++.+.+. ..|+|+-+
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~----~~l~ell~------~aDiVil~ 205 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK----DSVKEAIK------DADIISLH 205 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc----CCHHHHHh------cCCEEEEe
Confidence 67789999999999999999999999 999999876543211 00 10 12222221 47888888
Q ss_pred cCChh-----hHHHHHHhcccCCeEEEEEccC
Q 017201 270 TGVPS-----LLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 270 ~g~~~-----~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
....+ .....+..++++ ..++.++..
T Consensus 206 lP~t~~t~~li~~~~l~~mk~g-avlIN~aRG 236 (330)
T PRK12480 206 VPANKESYHLFDKAMFDHVKKG-AILVNAARG 236 (330)
T ss_pred CCCcHHHHHHHhHHHHhcCCCC-cEEEEcCCc
Confidence 76442 123456677776 777777633
No 439
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.02 E-value=0.23 Score=44.56 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=48.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.++||+|+ |++|...++.....|+ +|+++.++ ++.+.+ .+.+... ..|-.+ .+.....+.+... .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999988888888899 88888876 333222 2333221 123332 1233333333221 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 258999998874
No 440
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.02 E-value=0.31 Score=45.17 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=29.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
.|.++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999988 8999998888888899 89998876
No 441
>PRK07985 oxidoreductase; Provisional
Probab=94.00 E-value=0.68 Score=42.57 Aligned_cols=81 Identities=19% Similarity=0.051 Sum_probs=47.7
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhc
Q 017201 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~--~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~ 258 (375)
-.+.++||+|+ |++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... ..|-.+ .+.+.+.+.+..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 123 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH 123 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence 35679999998 9999988887778899 888876543 222222 2233322 123332 123333333322
Q ss_pred C-CCCccEEEEccCC
Q 017201 259 H-GMGVDYCFECTGV 272 (375)
Q Consensus 259 ~-~~g~d~vid~~g~ 272 (375)
. ..++|+++.+.|.
T Consensus 124 ~~~g~id~lv~~Ag~ 138 (294)
T PRK07985 124 KALGGLDIMALVAGK 138 (294)
T ss_pred HHhCCCCEEEECCCC
Confidence 1 1268999998763
No 442
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.27 Score=44.62 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=30.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW 226 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~ 226 (375)
.+.++||+|+ |.+|...++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999998 9999988887778898 8999987654
No 443
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.97 E-value=0.32 Score=43.31 Aligned_cols=79 Identities=18% Similarity=0.266 Sum_probs=49.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE-E--eCCCCCCcccHHHHHHhhc-CCC
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD-F--INPDDEPNKSISELVKGIT-HGM 261 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~~ 261 (375)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... + .|-.+ .+++...+.+.. .-.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 357999998 9999988888778899 89999998877655432 22221 1 23333 223333232221 112
Q ss_pred CccEEEEccCC
Q 017201 262 GVDYCFECTGV 272 (375)
Q Consensus 262 g~d~vid~~g~ 272 (375)
++|++|.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 58999988863
No 444
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.97 E-value=0.23 Score=46.13 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=61.4
Q ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH---hhhc-CC---cEEeCCCCCCcccHHHHH
Q 017201 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK---GKAF-GM---TDFINPDDEPNKSISELV 254 (375)
Q Consensus 182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~---~~~l-g~---~~v~~~~~~~~~~~~~~i 254 (375)
+.......+|++||-+|+|. |..+..+++. |+..|++++.++.-... ++++ +. ..+... ++
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~i---- 180 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------GI---- 180 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------CH----
Confidence 34455678899999999975 7666677654 66589999988754332 2222 11 112111 11
Q ss_pred HhhcCCCCccEEEEcc-----CCh-hhHHHHHHhcccCCeEEEEE
Q 017201 255 KGITHGMGVDYCFECT-----GVP-SLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 255 ~~~~~~~g~d~vid~~-----g~~-~~~~~~~~~l~~~~G~iv~~ 293 (375)
.++.....||+|+-.. .++ ..+.++.++|+++ |.++..
T Consensus 181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 1222223699998543 122 4788999999998 998864
No 445
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.95 E-value=0.25 Score=44.54 Aligned_cols=80 Identities=21% Similarity=0.315 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITHG- 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~- 260 (375)
.+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+ ++.+... ..|-.+ .+.....+.+....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 5678999988 9999987777777899 899988887765433 2334322 123332 12222323222111
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 258999999874
No 446
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.94 E-value=0.26 Score=46.76 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=31.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
...+|||+|+|++|..+++.+...|..+++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457999999999999999999999998999998653
No 447
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.92 E-value=0.54 Score=37.20 Aligned_cols=92 Identities=22% Similarity=0.347 Sum_probs=49.1
Q ss_pred EEEEECC-CHHHHHHHHHHHH-cCCCeEEEEc-CChh-h--HHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201 193 SVAVLGL-GTVGLGAVDGARM-HGAAKIIGID-KNPW-K--KEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVD 264 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~-~G~~~V~~~~-~~~~-~--~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d 264 (375)
+|+|+|+ |-+|...++.+.. -+. +++++. ++++ . .+.-.-.+. ..+... .++. +... .+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l~----~~~~--~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDLE----ELLE--EAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-HH----HHTT--H-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----hhHH----Hhcc--cCC
Confidence 6899999 9999999999987 566 555544 4331 1 111111111 111101 1222 2222 389
Q ss_pred EEEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 265 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
++||++. ++.....++.+... |.-+.+|.++.
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred EEEEcCC-hHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 9999994 44555555555554 67777887764
No 448
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.91 E-value=0.52 Score=43.30 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=66.1
Q ss_pred ccccchhhhhhhhhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 170 FLSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
.+||+....+. +.+.-++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45665444444 3344443 57999999998 5999988888888899 8988864322
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
+..+.++ ..|+||-++|.+..+...+ ++++ ..++.+|...
T Consensus 195 -~l~e~~~------~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~ 234 (301)
T PRK14194 195 -DAKALCR------QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR 234 (301)
T ss_pred -CHHHHHh------cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence 1222221 4899999999886666554 8887 8888888553
No 449
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.91 E-value=0.49 Score=41.78 Aligned_cols=80 Identities=21% Similarity=0.175 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
++.++||+|+ |.+|...++.+...|+ .|+...++.++.+.+. .++... + .|-.+ .+.+.+.+.+... -.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4679999998 9999988888878898 8888888777665442 333211 1 22222 1223222222211 1269
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|.+|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
No 450
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.88 E-value=0.52 Score=43.29 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=64.1
Q ss_pred ccccchhhhhhhhhhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHhhhcCCcEEeCCCCCC
Q 017201 170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~lg~~~v~~~~~~~ 246 (375)
.+||+....+. +.+.-+ --.|.+|+|+|- +.+|.-.+.++...|+ .|++.. +++
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45665444444 334334 368999999995 9999987777778898 888884 322
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 --~l~e~~~------~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 --DLPAVCR------RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --CHHHHHh------cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1111111 4899999999986665544 8887 8888888653
No 451
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.87 E-value=0.34 Score=47.49 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=48.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh----HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~----~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
.|.+++|+|+|.+|.++++++...|+ +|++.+.+... .+.+++.|......... .+. + ..++|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~-----~~~~d~ 71 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L-----DEDFDL 71 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h-----cCcCCE
Confidence 46789999998899999999999999 89999865422 23345567654332222 111 1 114899
Q ss_pred EEEccCC
Q 017201 266 CFECTGV 272 (375)
Q Consensus 266 vid~~g~ 272 (375)
||.+.|-
T Consensus 72 vV~s~gi 78 (447)
T PRK02472 72 MVKNPGI 78 (447)
T ss_pred EEECCCC
Confidence 9988764
No 452
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.87 E-value=0.82 Score=44.68 Aligned_cols=87 Identities=16% Similarity=0.221 Sum_probs=54.7
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 270 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~ 270 (375)
+|+|+|+ |.+|.+.+..++..|. +|++.++++++. +.+.++|+... .+..+.+ ...|+||-|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~~--------~~~~e~~------~~aDvVIlav 66 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEYA--------NDNIDAA------KDADIVIISV 66 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCeec--------cCHHHHh------ccCCEEEEec
Confidence 6899984 9999999898898998 899999888774 55666775311 1122211 1467777777
Q ss_pred CChh---hHHHHHHhcccCCeEEEEEcc
Q 017201 271 GVPS---LLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 271 g~~~---~~~~~~~~l~~~~G~iv~~g~ 295 (375)
.... .+......++++ ..++.++.
T Consensus 67 p~~~~~~vl~~l~~~l~~~-~iViDvsS 93 (437)
T PRK08655 67 PINVTEDVIKEVAPHVKEG-SLLMDVTS 93 (437)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEEccc
Confidence 6442 222333344554 55665553
No 453
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.87 E-value=0.69 Score=40.59 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=60.6
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE---------eCCCCCCcccHHHHHH
Q 017201 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF---------INPDDEPNKSISELVK 255 (375)
Q Consensus 186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v---------~~~~~~~~~~~~~~i~ 255 (375)
....++.+||+.|+| .|.-++.||. .|+ +|++++.++.-.+.+. +.+.... ....+ ..-....+.
T Consensus 33 ~~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~ 107 (218)
T PRK13255 33 LALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFF 107 (218)
T ss_pred hCCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECccc
Confidence 345678899999987 4777777775 698 9999999998777642 2222110 00000 000001111
Q ss_pred hhc--CCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEE
Q 017201 256 GIT--HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 256 ~~~--~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
++. ....||.|+|...- ...+....++|+++ |++..+
T Consensus 108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 111 11268999986631 23578889999997 865543
No 454
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.85 E-value=0.34 Score=49.61 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=58.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ |..+ .+. +++ .+=..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~~---L~~-agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDATR---MDL---LES-AGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCCC---HHH---HHh-cCCCcCCEEEEE
Confidence 3679999999999999999999998 899999999999999998875443 3332 232 222 333378999989
Q ss_pred cCChh
Q 017201 270 TGVPS 274 (375)
Q Consensus 270 ~g~~~ 274 (375)
+.+++
T Consensus 472 ~~d~~ 476 (621)
T PRK03562 472 IDDPQ 476 (621)
T ss_pred eCCHH
Confidence 88764
No 455
>PRK11579 putative oxidoreductase; Provisional
Probab=93.85 E-value=0.66 Score=43.84 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=74.7
Q ss_pred CEEEEECCCHHHH-HHHH-HHHHcCCCeEEEEcC-ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 192 SSVAVLGLGTVGL-GAVD-GARMHGAAKIIGIDK-NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 192 ~~VlI~Gag~~G~-~ai~-la~~~G~~~V~~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
=+|.|+|+|.+|. ..+. +.+.-++ +++++.. ++++. ..+++...++ .++.+.+ ...++|+|+-
T Consensus 5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~--~~~~~~~~~~-------~~~~ell----~~~~vD~V~I 70 (346)
T PRK11579 5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKV--KADWPTVTVV-------SEPQHLF----NDPNIDLIVI 70 (346)
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHH--HhhCCCCcee-------CCHHHHh----cCCCCCEEEE
Confidence 3789999999986 3444 3444466 7776553 43332 2334322222 2333322 2347999999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH---Hh----hcCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI---AL----ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 341 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
++....+.+.+..++..+ +=|++..+-. .+.. .+ -.+++.+.-.+ +.+....+..+.+++++|.+
T Consensus 71 ~tp~~~H~~~~~~al~aG--khVl~EKPla----~t~~ea~~l~~~a~~~g~~l~v~~--~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 71 PTPNDTHFPLAKAALEAG--KHVVVDKPFT----VTLSQARELDALAKSAGRVLSVFH--NRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred cCCcHHHHHHHHHHHHCC--CeEEEeCCCC----CCHHHHHHHHHHHHHhCCEEEEEe--eccCCHHHHHHHHHHhcCCC
Confidence 999888889999999874 5566765532 2221 11 12344443222 23334467788888988876
No 456
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.24 Score=44.36 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=46.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC 266 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v 266 (375)
+|.++||+|+ |++|...++.+...|+ +|+++++++++.. .-.... ..|-.+ .+...+.+.+... ..++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999988887778899 8999988765421 111111 123322 1222222222211 1269999
Q ss_pred EEccC
Q 017201 267 FECTG 271 (375)
Q Consensus 267 id~~g 271 (375)
|++.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99987
No 457
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=93.83 E-value=0.84 Score=42.79 Aligned_cols=131 Identities=18% Similarity=0.242 Sum_probs=80.1
Q ss_pred EEEEECCCHHH-HHHHHHHHHcC--CCeEEEEcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 193 SVAVLGLGTVG-LGAVDGARMHG--AAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 193 ~VlI~Gag~~G-~~ai~la~~~G--~~~V~~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
+|.|+|+|.++ ...+...+..+ ..-|-++++++++.+ .+++++...++ .++.+.+ ....+|+|+-
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll----~~~~iD~V~I 73 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY-------TDLEELL----ADPDIDAVYI 73 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc-------CCHHHHh----cCCCCCEEEE
Confidence 68899997555 44555555554 334555577888755 45678876332 2233322 2336999999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH------hh-cCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA------LA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 341 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
++.+..+.+.+...|.. |+=|++..+- ..++.. +- .+++.+.-.+ +.+....+..+.+++.+|.+
T Consensus 74 atp~~~H~e~~~~AL~a--GkhVl~EKPl----a~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~l 145 (342)
T COG0673 74 ATPNALHAELALAALEA--GKHVLCEKPL----ALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGAL 145 (342)
T ss_pred cCCChhhHHHHHHHHhc--CCEEEEcCCC----CCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCc
Confidence 99988889999999998 4667776553 222222 22 1233333222 23334567888899998866
Q ss_pred C
Q 017201 342 K 342 (375)
Q Consensus 342 ~ 342 (375)
-
T Consensus 146 G 146 (342)
T COG0673 146 G 146 (342)
T ss_pred C
Confidence 4
No 458
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.82 E-value=0.78 Score=39.97 Aligned_cols=115 Identities=13% Similarity=0.058 Sum_probs=66.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid 268 (375)
.|.+|||+|+|.+|.-=+.+....|+ +|++++..- +....+..-+-...+. +. +... .. .++++||-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~~---~~--~~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDAE---DL--DDAFLVIA 78 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cChh---hh--cCceEEEE
Confidence 57899999999999998889989999 888887654 3332222222211111 11 1111 01 14899999
Q ss_pred ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh-cCCceEEEE
Q 017201 269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGT 318 (375)
Q Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 318 (375)
+++++..-+...+..++. +.++...... ...++-....+ ...+++.-+
T Consensus 79 At~d~~ln~~i~~~a~~~-~i~vNv~D~p-~~~~f~~Pa~~~r~~l~iaIs 127 (210)
T COG1648 79 ATDDEELNERIAKAARER-RILVNVVDDP-ELCDFIFPAIVDRGPLQIAIS 127 (210)
T ss_pred eCCCHHHHHHHHHHHHHh-CCceeccCCc-ccCceecceeeccCCeEEEEE
Confidence 999884444555555554 7777665333 22333333333 234554433
No 459
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.81 E-value=0.39 Score=42.39 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=46.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHH----hhhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KEK----GKAFGMTD-FI--NPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~----~~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~- 259 (375)
.+.++||+|+ |.+|...++.+...|+ +|+++.+++++ .+. ++..+... .+ |-.+ .+.+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4578999998 9999998888888899 78776665442 221 22223322 22 3332 1222222222221
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|.+|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 1268999998874
No 460
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.81 E-value=0.25 Score=43.80 Aligned_cols=80 Identities=19% Similarity=0.152 Sum_probs=46.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhH-HHh---hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK-EKG---KAFGMTDF---INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~-~~~---~~lg~~~v---~~~~~~~~~~~~~~i~~~~~- 259 (375)
+++++||+|+ |.+|...++.+...|+ +|++.. +++.+. +.+ +..+.... .|-.+ .+++.+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999988 9999998888888898 777643 333222 222 23344332 23332 2233333332211
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
..++|++|++.|.
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 1269999999974
No 461
>PLN02256 arogenate dehydrogenase
Probab=93.80 E-value=0.93 Score=41.97 Aligned_cols=95 Identities=12% Similarity=0.217 Sum_probs=59.4
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
+...--.+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. . . +..+.+ . ...
T Consensus 29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~-----~~~e~~----~-~~a 93 (304)
T PLN02256 29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R-----DPDDFC----E-EHP 93 (304)
T ss_pred HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C-----CHHHHh----h-CCC
Confidence 33444466789999999999988888888887 8999988764 35566677632 1 1 222211 1 147
Q ss_pred cEEEEccCChhhHHHHHH-----hcccCCeEEEEEcc
Q 017201 264 DYCFECTGVPSLLSEALE-----TTKVGKGKVIVIGV 295 (375)
Q Consensus 264 d~vid~~g~~~~~~~~~~-----~l~~~~G~iv~~g~ 295 (375)
|+||-|+... .+...+. .+.++ ..++.++.
T Consensus 94 DvVilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CEEEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 8988888754 3333322 24454 56666654
No 462
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.32 Score=44.00 Aligned_cols=77 Identities=19% Similarity=0.209 Sum_probs=47.2
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201 193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-GMGV 263 (375)
Q Consensus 193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~ 263 (375)
+|||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ +..+.+.. .|-.+ .+++.+.+..... ..++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899988 9999987777777898 899999887765432 22232221 12222 1222222222211 1269
Q ss_pred cEEEEccCC
Q 017201 264 DYCFECTGV 272 (375)
Q Consensus 264 d~vid~~g~ 272 (375)
|++|++.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999874
No 463
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.79 E-value=0.21 Score=45.72 Aligned_cols=44 Identities=25% Similarity=0.234 Sum_probs=37.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 232 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~ 232 (375)
..+.++||+|+|+.+.+++.-+...|+.+++++.++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 45789999999999998888777899889999999988876553
No 464
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.76 E-value=0.32 Score=47.68 Aligned_cols=71 Identities=30% Similarity=0.363 Sum_probs=48.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKK----EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 264 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~----~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d 264 (375)
.+++|+|+|+|.+|+.+++.+...|+ +|++++.+. +.. +.+.+.|...+..... + .. . .++|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~----~---~~---~--~~~d 70 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGEYP----E---EF---L--EGVD 70 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcc----h---hH---h--hcCC
Confidence 47899999998899999999999999 999998764 222 3344556553322211 1 11 1 2689
Q ss_pred EEEEccCCh
Q 017201 265 YCFECTGVP 273 (375)
Q Consensus 265 ~vid~~g~~ 273 (375)
+||.+.|..
T Consensus 71 ~vv~~~g~~ 79 (450)
T PRK14106 71 LVVVSPGVP 79 (450)
T ss_pred EEEECCCCC
Confidence 999988753
No 465
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=93.74 E-value=0.078 Score=28.30 Aligned_cols=22 Identities=36% Similarity=0.418 Sum_probs=15.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCC
Q 017201 9 CKAVVCWGLGEPLKVEEIQVEPP 31 (375)
Q Consensus 9 ~~a~~~~~~~~~l~~~~~~~p~~ 31 (375)
|||++++++++ ++++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999985 99999998864
No 466
>PRK12743 oxidoreductase; Provisional
Probab=93.73 E-value=0.4 Score=42.95 Aligned_cols=79 Identities=10% Similarity=0.038 Sum_probs=46.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK----GKAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
++++||+|+ |.+|...++.+...|+ +|+.+.+ +.++.+. ++..+... + .|-.+ .+.....+.+... -
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999988 9999998888888899 8877754 4443322 23344322 1 23322 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
..+|++|.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 258999998873
No 467
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.71 E-value=0.49 Score=43.79 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=46.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HhhhcCCcEEeCCCCCC-cccHHHHHHhhcCCCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE----KGKAFGMTDFINPDDEP-NKSISELVKGITHGMG 262 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~----~~~~lg~~~v~~~~~~~-~~~~~~~i~~~~~~~g 262 (375)
.|.++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .++..|....+..-+.. .+...+.+........
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5788999988 9999987777777798 888887643 2222 22333433222111111 1222222222111226
Q ss_pred ccEEEEccCC
Q 017201 263 VDYCFECTGV 272 (375)
Q Consensus 263 ~d~vid~~g~ 272 (375)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 468
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.69 E-value=0.42 Score=44.85 Aligned_cols=96 Identities=21% Similarity=0.262 Sum_probs=62.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-c--EEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T--DFINPDDEPNKSISELVKGITHGMGVDY 265 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~ 265 (375)
.++.+||-+|+|. |..+..+++..+..+|++++.+++-.+.+++... . .++. .+..+ + .. ....||+
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~------gD~e~-l-p~-~~~sFDv 181 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE------GDAED-L-PF-PTDYADR 181 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe------ccHHh-C-CC-CCCceeE
Confidence 5788999999875 7777788887754589999998887777665321 1 1111 11211 1 11 1236999
Q ss_pred EEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201 266 CFECTG-----V-PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 266 vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
|+.+.. . ...+.++.+.|+++ |+++.++.
T Consensus 182 VIs~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 182 YVSAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred EEEcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 876432 1 23678899999998 99887753
No 469
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.68 E-value=0.74 Score=40.87 Aligned_cols=103 Identities=16% Similarity=0.099 Sum_probs=57.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKE----KGKAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
+.++||+|+ |.+|...++-....|+ +|+.+.++ .++.. .+++.+... . .|..+ ..+....+.+... -
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence 678999988 9999987777778898 77666543 22221 222333321 1 23322 1222222222211 1
Q ss_pred CCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201 261 MGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 261 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
.++|++|.+.|.. + ..+.+...++.. |+++.++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 2689999999731 0 123345555665 8888887543
No 470
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.68 E-value=0.65 Score=40.95 Aligned_cols=102 Identities=23% Similarity=0.303 Sum_probs=65.7
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCC-------cEEeCCCCCCcccHHHHHH
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGM-------TDFINPDDEPNKSISELVK 255 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~-------~~v~~~~~~~~~~~~~~i~ 255 (375)
......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-. ..++..+. .+.
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----- 115 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA---EAL----- 115 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc---ccC-----
Confidence 344566889999999986 888888888875 2399999999888777765321 11221111 011
Q ss_pred hhcCCCCccEEEEccC------ChhhHHHHHHhcccCCeEEEEEccC
Q 017201 256 GITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 256 ~~~~~~g~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
.. ....+|+|+-... ....+..+.++|+++ |.++.+...
T Consensus 116 ~~-~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 116 PF-PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CC-CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 01 2236899875322 124577889999998 998877543
No 471
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.65 E-value=0.39 Score=48.99 Aligned_cols=92 Identities=9% Similarity=0.083 Sum_probs=65.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201 192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT 270 (375)
Q Consensus 192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~ 270 (375)
++|+|.|.|.+|+..++..+..|. ++++++.++++.+.+++.|...++ |..+ .+. + +..+=...|.++-+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~~---L-~~agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDATQ---LEL---L-RAAGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCCC---HHH---H-HhcCCccCCEEEEEe
Confidence 579999999999999999999998 899999999999999998875443 3332 232 2 223333789999999
Q ss_pred CChhhHH---HHHHhcccCCeEEEE
Q 017201 271 GVPSLLS---EALETTKVGKGKVIV 292 (375)
Q Consensus 271 g~~~~~~---~~~~~l~~~~G~iv~ 292 (375)
++++.-. ...+...|. .+++.
T Consensus 473 ~d~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred CCHHHHHHHHHHHHHHCCC-CeEEE
Confidence 8864322 233444554 55554
No 472
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.61 E-value=0.83 Score=42.80 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=66.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHh-hhc----CCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG-KAF----GMTDFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~-~~l----g~~~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
.+...+++|+|+|..+.+.+..+. ..+.++|.+..++++|.+.+ +.+ +.. +... ++..+.+.
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~------ 193 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS------ 193 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc------
Confidence 345678999999999987766665 57877999999998887644 322 432 2111 12333331
Q ss_pred CccEEEEccCChh-hHHHHHHhcccCCeEEEEEccCCCccccchHHH
Q 017201 262 GVDYCFECTGVPS-LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 307 (375)
Q Consensus 262 g~d~vid~~g~~~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~ 307 (375)
+.|+|+.++++.. .+. .+.++++ -.+..+|........+++.-
T Consensus 194 ~aDiVvtaT~s~~p~i~--~~~l~~g-~~i~~vg~~~p~~rEld~~~ 237 (326)
T TIGR02992 194 GADIIVTTTPSETPILH--AEWLEPG-QHVTAMGSDAEHKNEIDPAV 237 (326)
T ss_pred cCCEEEEecCCCCcEec--HHHcCCC-cEEEeeCCCCCCceecCHHH
Confidence 6999999997652 222 2357886 77777876543344555444
No 473
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=93.59 E-value=1.1 Score=41.79 Aligned_cols=88 Identities=26% Similarity=0.430 Sum_probs=55.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 269 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~ 269 (375)
.|.+|.|+|.|.+|...++.++.+|. +|++.++...+. .....+... . .++.+-+. ..|++.-.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~afgm-~v~~~d~~~~~~-~~~~~~~~~---~-----~~Ld~lL~------~sDiv~lh 204 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAFGM-KVIGYDPYSPRE-RAGVDGVVG---V-----DSLDELLA------EADILTLH 204 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCCchh-hhcccccee---c-----ccHHHHHh------hCCEEEEc
Confidence 37899999999999999999999999 999999732221 111122111 1 12322222 36887766
Q ss_pred cCC-hh---hH-HHHHHhcccCCeEEEEEc
Q 017201 270 TGV-PS---LL-SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 270 ~g~-~~---~~-~~~~~~l~~~~G~iv~~g 294 (375)
+.. ++ .+ ...+..++++ ..++.++
T Consensus 205 ~PlT~eT~g~i~~~~~a~MK~g-ailIN~a 233 (324)
T COG0111 205 LPLTPETRGLINAEELAKMKPG-AILINAA 233 (324)
T ss_pred CCCCcchhcccCHHHHhhCCCC-eEEEECC
Confidence 642 21 12 3567777776 7666665
No 474
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.58 E-value=0.31 Score=37.75 Aligned_cols=93 Identities=24% Similarity=0.300 Sum_probs=56.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201 191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKGITHGMGV 263 (375)
Q Consensus 191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~~~~~~g~ 263 (375)
|.+||-.|+| .|...+.+++.. ..++++++.++...++++. .+. ..++. .|+.+....+ ....+
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~-~~~~~ 71 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPL-PDGKF 71 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTC-TTT-E
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE------Cchhhchhhc-cCcee
Confidence 5678888764 244555555554 3499999999998887753 332 12221 2443333233 33489
Q ss_pred cEEEEccCC--------------hhhHHHHHHhcccCCeEEEEE
Q 017201 264 DYCFECTGV--------------PSLLSEALETTKVGKGKVIVI 293 (375)
Q Consensus 264 d~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 293 (375)
|+|+-+..- ...+..+.+.|+++ |.++.+
T Consensus 72 D~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 72 DLIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 999875421 12478899999997 988765
No 475
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.53 E-value=0.4 Score=42.39 Aligned_cols=79 Identities=20% Similarity=0.223 Sum_probs=47.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
+.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+. ..+... + .|-.+ .+.+.+.+.+... -
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF 81 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 568999988 9999987777777798 88888 88776654332 222221 1 23222 1222222222211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 259999998874
No 476
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.53 E-value=0.43 Score=42.40 Aligned_cols=80 Identities=19% Similarity=0.134 Sum_probs=47.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEK----GKAFGMTD-F--INPDDEPNKSISELVKGITH- 259 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~-~~~~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~- 259 (375)
++.++||+|+ |.+|...++.+...|+ +|+. ..++.++.+. ++..+... . .|-.+ .++....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999988 9999988888888898 7665 4556555432 22334322 1 23222 2233333333221
Q ss_pred CCCccEEEEccCC
Q 017201 260 GMGVDYCFECTGV 272 (375)
Q Consensus 260 ~~g~d~vid~~g~ 272 (375)
-.++|++|++.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 1258999998873
No 477
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.51 E-value=0.37 Score=45.93 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
...+|||+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999998899999865
No 478
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=93.50 E-value=0.26 Score=43.78 Aligned_cols=103 Identities=23% Similarity=0.351 Sum_probs=62.0
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKG 256 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~ 256 (375)
+....++|++||=+|+|. |.++..+++..+. .+|++++.+++=++.+++ .+.. ..+..+. +++ .
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l-----p 111 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL-----P 111 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB-------
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----c
Confidence 445788999999998863 7788888988752 389999999888777653 2221 1222211 111 1
Q ss_pred hcCCCCccEEEEccCCh------hhHHHHHHhcccCCeEEEEEccCC
Q 017201 257 ITHGMGVDYCFECTGVP------SLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 257 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
..+ ..||.|.-+.|-. ..+.+..+.|+|+ |+++.+....
T Consensus 112 ~~d-~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~ 156 (233)
T PF01209_consen 112 FPD-NSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSK 156 (233)
T ss_dssp S-T-T-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB
T ss_pred CCC-CceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccC
Confidence 122 3699998776632 4688999999998 9988886543
No 479
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.49 E-value=1.7 Score=39.32 Aligned_cols=103 Identities=12% Similarity=0.144 Sum_probs=62.8
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH 259 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~ 259 (375)
...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+..... +.. .+.. ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~-~~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGA-AV 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhh-hc
Confidence 34678999999888764 555556666553 238999999999987664 456543211111 111 1111 11
Q ss_pred CCCccEEE-E--ccCC-------------------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201 260 GMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 260 ~~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
+ .||.|| | |+|. .+.+..++++++++ |+++....+
T Consensus 139 ~-~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstcs 201 (264)
T TIGR00446 139 P-KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTCS 201 (264)
T ss_pred c-CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeCC
Confidence 2 599986 3 2332 12677889999997 988755433
No 480
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.47 E-value=0.23 Score=45.84 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=55.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC-cccHHHHHHhhcCCCCccEEEEccC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTG 271 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~i~~~~~~~g~d~vid~~g 271 (375)
+|+|+|+|.+|...+..+...|. +|+.+++++++.+.+++.|... +..+.. .........+. ..+|+||-++-
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~---~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL---GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc---CCCCEEEEecc
Confidence 68999999999977776667787 8999998888877776655421 100000 00000001111 36899999987
Q ss_pred ChhhHHHHHHhc----ccCCeEEEEEc
Q 017201 272 VPSLLSEALETT----KVGKGKVIVIG 294 (375)
Q Consensus 272 ~~~~~~~~~~~l----~~~~G~iv~~g 294 (375)
.. .+..++..+ .++ ..++.+.
T Consensus 76 ~~-~~~~~~~~l~~~l~~~-~~iv~~~ 100 (304)
T PRK06522 76 AY-QLPAALPSLAPLLGPD-TPVLFLQ 100 (304)
T ss_pred cc-cHHHHHHHHhhhcCCC-CEEEEec
Confidence 55 334444433 343 4565553
No 481
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.45 E-value=0.79 Score=43.62 Aligned_cols=61 Identities=26% Similarity=0.309 Sum_probs=44.0
Q ss_pred CCcccccccccchhhhhhhhhhhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201 163 IDPSDASFLSCGFTTGYGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 226 (375)
Q Consensus 163 ~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~ 226 (375)
....+|.+..+.+.+- . +.+..+. -.|.+|.|-|-|.+|..+++.+...|+ +|++++.+..
T Consensus 180 ~~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 180 LGRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 3445555555443333 2 2333444 599999999999999999999998899 8999987665
No 482
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=93.45 E-value=0.44 Score=42.60 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
.+.+|||+|+ +.+|...++.....|+ +|+.++++.++.+.+ +..+.+. + .|-.+ .++..+.+..... -
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999988 9999988888778899 888888877665433 2223221 1 23332 1223232322211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 268999999873
No 483
>PRK13984 putative oxidoreductase; Provisional
Probab=93.45 E-value=0.38 Score=49.15 Aligned_cols=78 Identities=22% Similarity=0.215 Sum_probs=53.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCC
Q 017201 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEP 246 (375)
Q Consensus 188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~ 246 (375)
.+.+++|+|+|+|+.|+.++..++..|. +|++++..+. ..+.++++|++..++..-..
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 5678999999999999999999999999 8888875431 13455677876554432100
Q ss_pred cccHHHHHHhhcCCCCccEEEEccCC
Q 017201 247 NKSISELVKGITHGMGVDYCFECTGV 272 (375)
Q Consensus 247 ~~~~~~~i~~~~~~~g~d~vid~~g~ 272 (375)
+... +.+. ..+|.+|-++|.
T Consensus 359 ~~~~-~~~~-----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR-----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH-----hcCCEEEEEcCc
Confidence 0111 2221 269999999985
No 484
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.39 E-value=0.94 Score=36.70 Aligned_cols=95 Identities=21% Similarity=0.147 Sum_probs=62.7
Q ss_pred ccccchhhhhhhhhhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201 170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~ 247 (375)
.+|++...... +.+.-+ --.|.+|+|+|- ..+|.-.+.++...|+ .|+.+.++..
T Consensus 7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 34544333333 233334 358999999998 8899988888888898 8888875321
Q ss_pred ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297 (375)
Q Consensus 248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 297 (375)
++.+.++ ..|+|+-++|.++.+. -+.++++ ..++.+|...
T Consensus 64 -~l~~~v~------~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 64 -QLQSKVH------DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred -CHHHHHh------hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 1222222 5899999999875444 3558886 7877776443
No 485
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=93.38 E-value=0.84 Score=42.14 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=34.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 236 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~ 236 (375)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58899999999866555566788 89999999999888777664
No 486
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.37 E-value=0.51 Score=43.90 Aligned_cols=39 Identities=18% Similarity=0.188 Sum_probs=31.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~ 229 (375)
.|.+|||+|+ |.+|...++.+...|+ +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4789999998 9999988887777898 8988887765543
No 487
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=93.34 E-value=0.46 Score=49.04 Aligned_cols=77 Identities=23% Similarity=0.235 Sum_probs=52.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh---------------------HHHhhhcCCcEEeCCCCCCc
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK---------------------KEKGKAFGMTDFINPDDEPN 247 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~---------------------~~~~~~lg~~~v~~~~~~~~ 247 (375)
..+++|+|+|+|+.|+.|+..+...|. +|++++.++.- .+.++++|.+..++..- .
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v--~ 267 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVF--G 267 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcc--c
Confidence 467899999999999999999999998 89999865431 33455677765554321 0
Q ss_pred ccH-HHHHHhhcCCCCccEEEEccCCh
Q 017201 248 KSI-SELVKGITHGMGVDYCFECTGVP 273 (375)
Q Consensus 248 ~~~-~~~i~~~~~~~g~d~vid~~g~~ 273 (375)
.++ .+.+. ..+|.||-++|..
T Consensus 268 ~dv~~~~~~-----~~~DaVilAtGa~ 289 (652)
T PRK12814 268 RDITLEELQ-----KEFDAVLLAVGAQ 289 (652)
T ss_pred CccCHHHHH-----hhcCEEEEEcCCC
Confidence 111 11121 1489999988864
No 488
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.33 E-value=0.37 Score=40.67 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=28.5
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 225 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~ 225 (375)
+|+|+|+|++|...++.+.+.|..+++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999888888888997899998764
No 489
>PRK08223 hypothetical protein; Validated
Probab=93.31 E-value=0.32 Score=44.33 Aligned_cols=36 Identities=31% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~ 224 (375)
-...+|||+|+|++|..+++.+.+.|..++..++.+
T Consensus 25 L~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 25 LRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356899999999999999999999999899998855
No 490
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.31 E-value=0.64 Score=45.98 Aligned_cols=100 Identities=22% Similarity=0.273 Sum_probs=65.7
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc--CCc---EEeCCCCCCcccHHHHHHhhc
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMT---DFINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--g~~---~v~~~~~~~~~~~~~~i~~~~ 258 (375)
+...++++++||-+|+|. |..++.+++..|+ +|++++.+++-.+.+++. +.. .+... + +.. ..+
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-d-----~~~--~~~- 328 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVA-D-----CTK--KTY- 328 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEc-C-----ccc--CCC-
Confidence 344567899999999865 6677788888888 999999998887777542 211 11111 1 110 011
Q ss_pred CCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201 259 HGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 259 ~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
....||+|+.... . ...+..+.+.|+|+ |+++....
T Consensus 329 ~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 370 (475)
T PLN02336 329 PDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY 370 (475)
T ss_pred CCCCEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence 2236999986422 1 24688999999997 99887643
No 491
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.29 E-value=1.3 Score=43.20 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=64.4
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHhh
Q 017201 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKGI 257 (375)
Q Consensus 185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~~ 257 (375)
..++++|++||=.|+|+ |..+.+++..++ ..+|++++.++++++.++ .+|.+. ++..+. .++ ...
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~~ 303 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TEY 303 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hhh
Confidence 45788999999988764 555666677662 238999999999988774 456543 222211 111 111
Q ss_pred cCCCCccEEEE---ccCCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201 258 THGMGVDYCFE---CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 258 ~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
..+ .||.|+- |+|.. +.+..+++.|+++ |.++..-.+
T Consensus 304 ~~~-~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 304 VQD-TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred hhc-cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 122 6999863 33321 1366889999997 987765444
No 492
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.29 E-value=0.68 Score=38.31 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=52.9
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC------cEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM------TDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~------~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
+|.|+|+|..|.+.+..+...|. +|..-.++++..+.+++-+. ...+...-.-..++.+.++ +.|++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~------~ad~I 73 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE------DADII 73 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT------T-SEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC------cccEE
Confidence 58899999999999999999997 99999999887776654221 1101000000123444442 68999
Q ss_pred EEccCChhhHHHHHHhccc
Q 017201 267 FECTGVPSLLSEALETTKV 285 (375)
Q Consensus 267 id~~g~~~~~~~~~~~l~~ 285 (375)
+-++.+. .+...++.+++
T Consensus 74 iiavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 74 IIAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp EE-S-GG-GHHHHHHHHTT
T ss_pred EecccHH-HHHHHHHHHhh
Confidence 9998876 44555555544
No 493
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=93.27 E-value=0.97 Score=44.06 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=63.8
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc-EEeCCCCCCcccHHHHHHhhc
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFINPDDEPNKSISELVKGIT 258 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~i~~~~ 258 (375)
...++++|++||=+|+|+ |..+..+++..+..+|++++.++++.+.++ .+|.. .++..+. .+. ....
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~---~~~----~~~~ 309 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA---RDP----AQWW 309 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc---ccc----hhhc
Confidence 345778999999998754 445566666654239999999999887764 34543 2332221 111 1111
Q ss_pred CCCCccEEE-E--ccCC-------------------------hhhHHHHHHhcccCCeEEEEEcc
Q 017201 259 HGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV 295 (375)
Q Consensus 259 ~~~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~ 295 (375)
....||.|+ | |++. ...+..+.+.|+++ |+++..-.
T Consensus 310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvystc 373 (427)
T PRK10901 310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYATC 373 (427)
T ss_pred ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 223699986 3 2221 13577899999998 98876543
No 494
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.27 E-value=0.53 Score=42.73 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=49.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G 260 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~ 260 (375)
+..++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ +..+.... .|-.+ .+.+.+.+.+... -
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 3468999998 9999988887778898 898888877654432 22343221 13222 1233333332211 1
Q ss_pred CCccEEEEccCC
Q 017201 261 MGVDYCFECTGV 272 (375)
Q Consensus 261 ~g~d~vid~~g~ 272 (375)
.++|++|.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (274)
T PRK07775 86 GEIEVLVSGAGD 97 (274)
T ss_pred CCCCEEEECCCc
Confidence 268999999874
No 495
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.27 E-value=1.2 Score=41.36 Aligned_cols=90 Identities=22% Similarity=0.269 Sum_probs=60.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 266 (375)
Q Consensus 187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v 266 (375)
..-.|++|.|+|-|.+|...++.++..|. +|++..+.....+.+...|+.. . ++.+.++ ..|+|
T Consensus 12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~--------sl~Eaak------~ADVV 75 (335)
T PRK13403 12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M--------SVSEAVR------TAQVV 75 (335)
T ss_pred hhhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C--------CHHHHHh------cCCEE
Confidence 44578999999999999999999999999 8988866544445566666632 1 1222222 57999
Q ss_pred EEccCChhh---H-HHHHHhcccCCeEEEEEc
Q 017201 267 FECTGVPSL---L-SEALETTKVGKGKVIVIG 294 (375)
Q Consensus 267 id~~g~~~~---~-~~~~~~l~~~~G~iv~~g 294 (375)
+-+...+.. + ...+..++++ .++.++
T Consensus 76 ~llLPd~~t~~V~~~eil~~MK~G--aiL~f~ 105 (335)
T PRK13403 76 QMLLPDEQQAHVYKAEVEENLREG--QMLLFS 105 (335)
T ss_pred EEeCCChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence 888875432 2 2456666774 444443
No 496
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.22 E-value=0.59 Score=43.30 Aligned_cols=75 Identities=20% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH---HhhhcC-Cc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201 190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE---KGKAFG-MT---DFINPDDEPNKSISELVKGITHGM 261 (375)
Q Consensus 190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~---~~~~lg-~~---~v~~~~~~~~~~~~~~i~~~~~~~ 261 (375)
.+..|+|+|| |-+|...+..+...|+ +|.+++|+++..+ .+++|. +. .++..+=.+...+.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------ 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh------
Confidence 6789999999 9999999999999999 8999999987743 466654 21 122111101123444332
Q ss_pred CccEEEEccC
Q 017201 262 GVDYCFECTG 271 (375)
Q Consensus 262 g~d~vid~~g 271 (375)
|.|.||.+..
T Consensus 78 gcdgVfH~As 87 (327)
T KOG1502|consen 78 GCDGVFHTAS 87 (327)
T ss_pred CCCEEEEeCc
Confidence 6999998775
No 497
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.21 E-value=0.54 Score=44.70 Aligned_cols=81 Identities=20% Similarity=0.201 Sum_probs=46.5
Q ss_pred CCCCEEEEECC-CHHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHhhhcCCcE-Ee--CCCCCC
Q 017201 189 EKGSSVAVLGL-GTVGLG--AVDGARMHGAAKIIGIDKNPW--K--------------KEKGKAFGMTD-FI--NPDDEP 246 (375)
Q Consensus 189 ~~g~~VlI~Ga-g~~G~~--ai~la~~~G~~~V~~~~~~~~--~--------------~~~~~~lg~~~-v~--~~~~~~ 246 (375)
..|+++||+|+ +++|++ .++.+ ..|+ +|+++....+ + .+.++++|... .+ |-.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-- 114 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-- 114 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC--
Confidence 45678999988 899988 34444 7898 7777763221 1 22344556432 22 2222
Q ss_pred cccHHHHHHhhcCC-CCccEEEEccCCh
Q 017201 247 NKSISELVKGITHG-MGVDYCFECTGVP 273 (375)
Q Consensus 247 ~~~~~~~i~~~~~~-~g~d~vid~~g~~ 273 (375)
.+...+.+.++... .++|+++++.+.+
T Consensus 115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 115 DEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 22333333332221 2699999999876
No 498
>PRK03612 spermidine synthase; Provisional
Probab=93.20 E-value=0.72 Score=46.20 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=63.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-CcE----EeCCCCC--CcccHHHHHHhhcCCC
Q 017201 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-MTD----FINPDDE--PNKSISELVKGITHGM 261 (375)
Q Consensus 189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~~~----v~~~~~~--~~~~~~~~i~~~~~~~ 261 (375)
.+.++||++|+| .|..+..++++-...+|++++.+++-.+.+++.. ... .++.... ...|..+.+++. . .
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~-~-~ 372 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKL-A-E 372 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhC-C-C
Confidence 567899999886 3666777777655359999999999888887621 000 0110000 012333334332 2 3
Q ss_pred CccEEEEccCCh-----------hhHHHHHHhcccCCeEEEEEc
Q 017201 262 GVDYCFECTGVP-----------SLLSEALETTKVGKGKVIVIG 294 (375)
Q Consensus 262 g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g 294 (375)
.||+|+-....+ +.++.+.+.|+++ |.++.-.
T Consensus 373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 799986544321 2467888999998 9887654
No 499
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=93.19 E-value=0.84 Score=44.76 Aligned_cols=101 Identities=28% Similarity=0.295 Sum_probs=62.9
Q ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 256 (375)
Q Consensus 184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~ 256 (375)
......+|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++ .+|... ++..+. .++
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da---~~~------ 313 (445)
T PRK14904 244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDA---RSF------ 313 (445)
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcc---ccc------
Confidence 345678999999998753 434445555442 238999999999987664 456543 222211 111
Q ss_pred hcCCCCccEEEE---ccCCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201 257 ITHGMGVDYCFE---CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG 296 (375)
Q Consensus 257 ~~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 296 (375)
.....||.|+- |+|.. ..+..+.++++++ |+++..-.+
T Consensus 314 -~~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvystcs 379 (445)
T PRK14904 314 -SPEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPG-GVLVYATCS 379 (445)
T ss_pred -ccCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 12236999863 44321 2477889999997 988876444
No 500
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=93.19 E-value=0.93 Score=41.50 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=70.7
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-C---cE-EeCCCC-CCcccHHHHHHhhcCC
Q 017201 188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M---TD-FINPDD-EPNKSISELVKGITHG 260 (375)
Q Consensus 188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~---~~-v~~~~~-~~~~~~~~~i~~~~~~ 260 (375)
...+..|||+|+ ++.|...+.-+-..|. +|++.+-.++..+.++..- . .. -+|--+ .......+.+++..+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 346667999999 9999988777788899 8999987777765554211 1 11 122211 0112334555666666
Q ss_pred CCccEEEEccCCh--------------------------hhHHHHHHhcccCCeEEEEEccCCC
Q 017201 261 MGVDYCFECTGVP--------------------------SLLSEALETTKVGKGKVIVIGVGVD 298 (375)
Q Consensus 261 ~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~~~ 298 (375)
.+.--+|+++|-. ......+.++++..||++.++...+
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 6777788888711 1234456667776799999986654
Done!