Query 017205
Match_columns 375
No_of_seqs 307 out of 2165
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.7 7.2E-18 2.5E-22 161.2 4.3 181 151-340 111-345 (367)
2 3arc_J Photosystem II reaction 11.8 2.5E+02 0.0086 17.5 3.2 18 81-98 8-25 (40)
3 1zxx_A 6-phosphofructokinase; 8.5 4E+02 0.014 24.5 5.0 57 188-246 168-224 (319)
4 1otf_A 4-oxalocrotonate tautom 8.2 3.1E+02 0.011 17.5 3.2 24 318-341 13-36 (62)
5 1pfk_A Phosphofructokinase; tr 8.1 4.2E+02 0.014 24.4 5.0 57 188-246 169-225 (320)
6 2opa_A Probable tautomerase YW 8.1 3.2E+02 0.011 17.4 3.2 24 318-341 13-36 (61)
7 3abf_A 4-oxalocrotonate tautom 7.8 3.4E+02 0.012 17.5 3.2 34 305-341 4-37 (64)
8 2lnd_A De novo designed protei 7.6 3.2E+02 0.011 19.8 3.0 23 318-340 85-107 (112)
9 2x4k_A 4-oxalocrotonate tautom 7.4 3.6E+02 0.012 17.1 3.2 23 319-341 17-39 (63)
10 3ry0_A Putative tautomerase; o 7.1 3.8E+02 0.013 17.6 3.2 24 318-341 13-36 (65)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.69 E-value=7.2e-18 Score=161.21 Aligned_cols=181 Identities=10% Similarity=0.073 Sum_probs=117.0
Q ss_pred EEEEc-------CCCCC-CCCeEEEeCCCchhHHHHHHhhc---------ceEEEEEcCccc---chhHHHHHHhhhCee
Q 017205 151 VKYHG-------PRPSM-RPKQVFVANHTSMIDFIILEQMT---------AFAVIMQKHPGW---VGLLQSTILESVGCI 210 (375)
Q Consensus 151 i~~~g-------~~~~~-~~~~IiVaNH~S~lD~liL~~~~---------~~~~v~~~~~~~---~~~l~g~~~~~~g~I 210 (375)
++++| .++.+ .+++|++|||+|.+|.+++...+ ++.++++++... ..|+ +.+ +.++||
T Consensus 111 s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~Pl~~Pf-s~g-~~l~cI 188 (367)
T 1iuq_A 111 SFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPF-SIG-RNLICV 188 (367)
T ss_dssp CEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHH-HHT-SEEEEC
T ss_pred CEeecchhhhhHHhhccCCCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcCccccch-hhh-hheeeE
Confidence 44777 44443 36899999999999999998886 467888776542 2222 333 446677
Q ss_pred EE----E------cCCcccHHHHHHHHHHHHhCCCCCcEEEEeCceeeCC----Ccc--cccccccc----c----cCCe
Q 017205 211 WF----N------RSEAKDREIVARKLRDHVQGTDNNPLLIFPEGTCVNN----HYT--VMFKKGAF----E----LGCT 266 (375)
Q Consensus 211 ~v----~------R~~~~~~~~~~~~l~~~l~~~~~~~llIFPEGT~~n~----~~l--l~Fk~Gaf----~----~~~p 266 (375)
+. + |++.+...+.++++.+.++. .|..++|||||||+++ +.+ .+||+|+| . .|+|
T Consensus 189 ~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~-GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 189 YSKKHMFDIPELTETKRKANTRSLKEMALLLRG-GSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp CCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHH-CCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSC
T ss_pred EecccCCCcchhhhhhhHHHHHHHHHHHHHHHc-CCeEEEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCC
Confidence 75 4 44444445556666677662 4779999999999986 334 45999998 2 5999
Q ss_pred --EEEEEEEeccccccccccCCCchHHHHHHHHhcccceEEEEEEeccccCCC----C----CCHHHHHHHHHHHHHHHc
Q 017205 267 --VCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQTLRP----G----ETAIEFAERVRDIISVRA 336 (375)
Q Consensus 267 --I~PVaI~y~~~~~~~~w~~~~~~~~~~l~~~m~~~~~~~~V~~l~Pi~~~~----~----e~~~efa~~vr~~Ia~~~ 336 (375)
|+||+|.....+..+- .-+.++. .--..-...+.|.++|||+.++ . +..+++++.|++.|++.+
T Consensus 268 ~hIvPvaI~t~~imppp~--~ve~~~g----~~r~i~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y 341 (367)
T 1iuq_A 268 GHLFPLALLCHDIMPPPS--QVEIEIG----EKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQY 341 (367)
T ss_dssp EEEEEEEEECGGGSCCC----------------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEeccccCCcc--ccccccc----ccceeecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999443332210 0000110 0000112578899999997653 1 234579999999999887
Q ss_pred CCCc
Q 017205 337 GLKK 340 (375)
Q Consensus 337 g~~~ 340 (375)
.+..
T Consensus 342 ~~l~ 345 (367)
T 1iuq_A 342 NVLK 345 (367)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 2
>3arc_J Photosystem II reaction center protein J; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_J* 3a0b_J* 3a0h_J* 2axt_J* 3bz1_J* 3bz2_J* 3kzi_J* 3prq_J* 3prr_J*
Probab=11.78 E-value=2.5e+02 Score=17.49 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017205 81 FPLWCFGVVFRYFILFPL 98 (375)
Q Consensus 81 ~~l~~~g~~~r~~il~pl 98 (375)
.++|++|.+.-..++..+
T Consensus 8 iPLWlvgtv~G~~vi~~~ 25 (40)
T 3arc_J 8 IPLWIVATVAGMGVIVIV 25 (40)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred ccEEeeeeehhhhhhhee
Confidence 467877776555544433
No 3
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=8.47 E-value=4e+02 Score=24.48 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=38.5
Q ss_pred EEEcCcccchhHHHHHHhhhCeeEEEcCCcccHHHHHHHHHHHHhCCCCCcEEEEeCce
Q 017205 188 IMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLLIFPEGT 246 (375)
Q Consensus 188 v~~~~~~~~~~l~g~~~~~~g~I~v~R~~~~~~~~~~~~l~~~l~~~~~~~llIFPEGT 246 (375)
+|-++.+|.. +...+....+.+.+. ..+-+.+.+.+.+++..+...+..+++-+||.
T Consensus 168 vMGR~aG~lA-l~a~lA~ga~~iliP-E~~~~~~~i~~~i~~~~~~gk~~~iIvvaEG~ 224 (319)
T 1zxx_A 168 VMGRNCGDIA-MRVGVACGADAIVIP-ERPYDVEEIANRLKQAQESGKDHGLVVVAEGV 224 (319)
T ss_dssp ECCTTCCHHH-HHHHHHTTCSEEECT-TSCCCHHHHHHHHHHHHHTTCCCEEEEEETTT
T ss_pred eCCCCHHHHH-HHHHHhcCCCEEEeC-CCCCCHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 3557777765 434444444555543 34556778888888888766778899999996
No 4
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=8.19 E-value=3.1e+02 Score=17.53 Aligned_cols=24 Identities=8% Similarity=0.044 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcc
Q 017205 318 GETAIEFAERVRDIISVRAGLKKV 341 (375)
Q Consensus 318 ~e~~~efa~~vr~~Ia~~~g~~~~ 341 (375)
.+..+++++.+-+.+.+.+|.+.-
T Consensus 13 ~e~k~~l~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 13 DEQKETLIRQVSEAMANSLDAPLE 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcc
Confidence 356788999999999999998764
No 5
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=8.14 E-value=4.2e+02 Score=24.36 Aligned_cols=57 Identities=12% Similarity=0.172 Sum_probs=38.3
Q ss_pred EEEcCcccchhHHHHHHhhhCeeEEEcCCcccHHHHHHHHHHHHhCCCCCcEEEEeCce
Q 017205 188 IMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLRDHVQGTDNNPLLIFPEGT 246 (375)
Q Consensus 188 v~~~~~~~~~~l~g~~~~~~g~I~v~R~~~~~~~~~~~~l~~~l~~~~~~~llIFPEGT 246 (375)
+|-++.+|.. +...+....+.+.+. ..+-+.+.+.+.+++..+...+..+++-+||.
T Consensus 169 vMGR~aG~lA-l~a~lA~ga~~iliP-E~~~~~~~i~~~i~~~~~~gk~~~iIvvaEG~ 225 (320)
T 1pfk_A 169 VMGRYCGDLT-LAAAIAGGCEFVVVP-EVEFSREDLVNEIKAGIAKGKKHAIVAITEHM 225 (320)
T ss_dssp ECCTTCCHHH-HHHHHHTTCSEEECT-TSCCCHHHHHHHHHHHHHTTCSCEEEEEESSS
T ss_pred eCCcCHHHHH-HHHHHhcCCCEEEeC-CCCCCHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 3557777765 434444444555543 34456778888888888665777899999996
No 6
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=8.07 E-value=3.2e+02 Score=17.42 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=20.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcc
Q 017205 318 GETAIEFAERVRDIISVRAGLKKV 341 (375)
Q Consensus 318 ~e~~~efa~~vr~~Ia~~~g~~~~ 341 (375)
.+..+++++++-+.+++.+|.+.-
T Consensus 13 ~eqk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 13 DEQKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcC
Confidence 356788999999999999998753
No 7
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=7.77 E-value=3.4e+02 Score=17.50 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=24.1
Q ss_pred EEEEEeccccCCCCCCHHHHHHHHHHHHHHHcCCCcc
Q 017205 305 CDVWYLEPQTLRPGETAIEFAERVRDIISVRAGLKKV 341 (375)
Q Consensus 305 ~~V~~l~Pi~~~~~e~~~efa~~vr~~Ia~~~g~~~~ 341 (375)
++|...++. ..+..+++++++-+.+++.+|.+.-
T Consensus 4 i~i~~~~g~---s~eqk~~l~~~lt~~l~~~lg~~~~ 37 (64)
T 3abf_A 4 LKVTLLEGR---PPEKKRELVRRLTEMASRLLGEPYE 37 (64)
T ss_dssp EEEEEETTC---CHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred EEEEECCCC---CHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 445444432 2355788999999999999998753
No 8
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=7.61 E-value=3.2e+02 Score=19.85 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCc
Q 017205 318 GETAIEFAERVRDIISVRAGLKK 340 (375)
Q Consensus 318 ~e~~~efa~~vr~~Ia~~~g~~~ 340 (375)
..+++|+++|||+.+..++.++-
T Consensus 85 stdpeeltqrvreflktagsleh 107 (112)
T 2lnd_A 85 STDPEELTQRVREFLKTAGSLEH 107 (112)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCCC
T ss_pred cCCHHHHHHHHHHHHHhcccchh
Confidence 46789999999999888766543
No 9
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=7.41 E-value=3.6e+02 Score=17.09 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcc
Q 017205 319 ETAIEFAERVRDIISVRAGLKKV 341 (375)
Q Consensus 319 e~~~efa~~vr~~Ia~~~g~~~~ 341 (375)
+..+++++.+.+.+++.+|.+.-
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~ 39 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQ 39 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcc
Confidence 55778999999999999998763
No 10
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=7.05 E-value=3.8e+02 Score=17.61 Aligned_cols=24 Identities=8% Similarity=0.032 Sum_probs=20.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcc
Q 017205 318 GETAIEFAERVRDIISVRAGLKKV 341 (375)
Q Consensus 318 ~e~~~efa~~vr~~Ia~~~g~~~~ 341 (375)
.+..+++++.+.+++.+.+|.+.-
T Consensus 13 ~eqk~~L~~~it~~~~~~lg~p~~ 36 (65)
T 3ry0_A 13 PQEVAALGEALTAAAHETLGTPVE 36 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcc
Confidence 366788999999999999998754
Done!