Your job contains 1 sequence.
>017210
MMALEHNEAMQRMCEASLKGLQSRGIRCNLQYNNGNSVELKDDTIVHPGGDAGESIHQLS
SEFVEYSNEFYNNPTYQHDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEII
EFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDK
WLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRC
NLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQ
FPERIFLPPHQLHKQMDLQNSIFQYHPSCFCGVKSSKGMVRKPGPKQGSVFFGCGNWTVT
RGARCHFFEWAFTTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017210
(375 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BVJ4 - symbol:ERI2 "Uncharacterized protein" ... 393 1.7e-36 1
UNIPROTKB|A8K979 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 337 4.4e-36 2
ZFIN|ZDB-GENE-050522-292 - symbol:zgc:111991 "zgc:111991"... 331 1.3e-35 2
UNIPROTKB|F1P8R6 - symbol:ERI2 "Uncharacterized protein" ... 325 6.9e-35 2
MGI|MGI:1918401 - symbol:Eri2 "exoribonuclease 2" species... 329 1.1e-34 2
UNIPROTKB|A6QLH5 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 375 1.3e-34 1
RGD|1583889 - symbol:Eri2 "ERI1 exoribonuclease family me... 328 1.4e-34 2
UNIPROTKB|O43414 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 374 1.7e-34 1
UNIPROTKB|E2RAN5 - symbol:ERI3 "Uncharacterized protein" ... 370 4.6e-34 1
MGI|MGI:2153887 - symbol:Eri3 "exoribonuclease 3" species... 370 4.6e-34 1
UNIPROTKB|E1BJE4 - symbol:ERI2 "Uncharacterized protein" ... 321 5.1e-34 2
UNIPROTKB|Q8IV48 - symbol:ERI1 "3'-5' exoribonuclease 1" ... 353 2.9e-32 1
UNIPROTKB|E2QU14 - symbol:ERI1 "Uncharacterized protein" ... 348 9.8e-32 1
WB|WBGene00019724 - symbol:M02B7.2 species:6239 "Caenorha... 347 1.3e-31 1
UNIPROTKB|I3LQQ1 - symbol:ERI1 "Uncharacterized protein" ... 345 2.0e-31 1
WB|WBGene00019825 - symbol:R02D3.8 species:6239 "Caenorha... 342 4.2e-31 1
UNIPROTKB|Q32LA2 - symbol:THEX1 "Uncharacterized protein"... 341 5.4e-31 1
MGI|MGI:1914526 - symbol:Eri1 "exoribonuclease 1" species... 335 2.3e-30 1
DICTYBASE|DDB_G0283113 - symbol:eriA "RNA exonuclease" sp... 332 4.9e-30 1
ZFIN|ZDB-GENE-050522-39 - symbol:eri1 "exoribonuclease 1"... 331 6.2e-30 1
RGD|1308378 - symbol:Eri1 "exoribonuclease 1" species:101... 327 1.6e-29 1
UNIPROTKB|G3MZQ7 - symbol:ERI1 "Uncharacterized protein" ... 323 4.4e-29 1
UNIPROTKB|Q5ZL01 - symbol:ERI1 "Uncharacterized protein" ... 317 1.9e-28 1
WB|WBGene00001332 - symbol:eri-1 species:6239 "Caenorhabd... 296 1.7e-25 1
UNIPROTKB|H0Y4B0 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 222 5.0e-25 2
UNIPROTKB|F1ML00 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 258 3.4e-22 1
UNIPROTKB|B4DEX5 - symbol:ERI3 "Prion protein interacting... 258 3.4e-22 1
RGD|1595859 - symbol:Eri3 "ERI1 exoribonuclease family me... 253 1.1e-21 1
UNIPROTKB|F1NBT2 - symbol:F1NBT2 "Uncharacterized protein... 248 4.4e-21 1
UNIPROTKB|F6UGJ8 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 248 4.4e-21 1
UNIPROTKB|F1S331 - symbol:ERI3 "Uncharacterized protein" ... 248 4.4e-21 1
UNIPROTKB|H3BN77 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 244 1.4e-20 1
UNIPROTKB|F6QUN3 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 226 1.7e-18 1
TAIR|locus:2083636 - symbol:AT3G15140 "AT3G15140" species... 231 1.0e-17 1
WB|WBGene00000797 - symbol:crn-4 species:6239 "Caenorhabd... 218 2.8e-17 1
POMBASE|SPBC30B4.08 - symbol:eri1 "double-strand siRNA ri... 163 1.1e-16 2
UNIPROTKB|I3L645 - symbol:ERI2 "Uncharacterized protein" ... 200 1.5e-15 1
UNIPROTKB|Q81K63 - symbol:kapD "Sporulation inhibitor Kap... 194 6.9e-15 1
TIGR_CMR|BA_5142 - symbol:BA_5142 "sporulation inhibitor ... 194 6.9e-15 1
UNIPROTKB|Q9KS82 - symbol:VC1377 "Putative uncharacterize... 153 2.3e-10 1
TIGR_CMR|VC_1377 - symbol:VC_1377 "conserved hypothetical... 153 2.3e-10 1
TIGR_CMR|BA_3593 - symbol:BA_3593 "exonuclease family pro... 122 9.5e-06 2
UNIPROTKB|G4MV21 - symbol:MGG_07327 "Asparagine-rich prot... 127 7.1e-05 1
>UNIPROTKB|E1BVJ4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:PFLLPSW
EMBL:AADN02064630 IPI:IPI00578773 ProteinModelPortal:E1BVJ4
Ensembl:ENSGALT00000003470 Uniprot:E1BVJ4
Length = 241
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 87/214 (40%), Positives = 127/214 (59%)
Query: 90 SQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQL 149
+++ EF + +V+DFE+TC +D EIIEFP+V++++ TG++EA F T+V+P +
Sbjct: 26 AERRSEFDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQEQPV 85
Query: 150 LSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-----ENKGIKNTNF---AV------- 194
LS+FC LTG+ Q QVD GV L L + KWL E K + +++ A+
Sbjct: 86 LSEFCTTLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCT 145
Query: 195 -VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 253
VTW++WD V L EC+ K++WKP FN WI+LK + + L A++ GLA+
Sbjct: 146 FVTWTDWDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPKGLSGALQYVGLAF 205
Query: 254 QGRAHCGLDDAKNTARLLALLMHRGFKFSITNSL 287
GR H GLDD++NTARL L+ G IT SL
Sbjct: 206 VGREHSGLDDSRNTARLAWRLICDGCVLKITKSL 239
>UNIPROTKB|A8K979 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 OrthoDB:EOG4F1X2H EMBL:AK127391
EMBL:AK292594 EMBL:BC010503 EMBL:AB040937 IPI:IPI00027086
IPI:IPI00444503 IPI:IPI00555642 IPI:IPI00872685
RefSeq:NP_001136197.1 RefSeq:NP_542394.2 UniGene:Hs.248437
ProteinModelPortal:A8K979 SMR:A8K979 STRING:A8K979
PhosphoSite:A8K979 PRIDE:A8K979 DNASU:112479
Ensembl:ENST00000300005 Ensembl:ENST00000357967
Ensembl:ENST00000389345 Ensembl:ENST00000563117
Ensembl:ENST00000564349 Ensembl:ENST00000569729 GeneID:112479
KEGG:hsa:112479 UCSC:uc002dhs.3 UCSC:uc002dht.3 UCSC:uc002dhu.1
CTD:112479 GeneCards:GC16M020791 HGNC:HGNC:30541 HPA:HPA035384
neXtProt:NX_A8K979 PharmGKB:PA164719245 HOGENOM:HOG000112417
HOVERGEN:HBG097018 InParanoid:A8K979 OMA:PFLLPSW GenomeRNAi:112479
NextBio:78594 Bgee:A8K979 CleanEx:HS_ERI2 Genevestigator:A8K979
Uniprot:A8K979
Length = 691
Score = 337 (123.7 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 76/192 (39%), Positives = 112/192 (58%)
Query: 112 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTL 171
K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P + +LS+FC +LTGI+Q QVD GV L
Sbjct: 51 KHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPL 110
Query: 172 SEALLRHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKI 215
L + KW+ + KN FA VTWS+WD V LE EC+ K++
Sbjct: 111 KICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQL 170
Query: 216 WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 275
KP + N WI+L+ + + L A++ G+ + GR H GLDD++NTA L ++
Sbjct: 171 LKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMI 230
Query: 276 HRGFKFSITNSL 287
G IT SL
Sbjct: 231 RDGCVMKITRSL 242
Score = 244 (91.0 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P +
Sbjct: 28 SKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFA 193
+LS+FC +LTGI+Q QVD GV L L + KW+ + KN FA
Sbjct: 88 ILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFA 133
Score = 84 (34.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 327 PSCFCGVKSSKGMVRKPGPKQGSVFFGC--GNWTVTRGARCHFFEWAFT 373
P C CG +S + +V GP G VF+ C G + R C +F+W T
Sbjct: 595 PLCKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKC-CGYFKWEQT 642
>ZFIN|ZDB-GENE-050522-292 [details] [associations]
symbol:zgc:111991 "zgc:111991" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-050522-292 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BC095637 IPI:IPI00607271 RefSeq:NP_001018476.1
UniGene:Dr.89386 HSSP:Q8IV48 ProteinModelPortal:Q502M8 PRIDE:Q502M8
GeneID:553667 KEGG:dre:553667 eggNOG:NOG304111 InParanoid:Q502M8
OrthoDB:EOG4F1X2H NextBio:20880400 Uniprot:Q502M8
Length = 555
Score = 331 (121.6 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 78/207 (37%), Positives = 117/207 (56%)
Query: 94 QEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 153
Q F + ++IDFE+TC ++K+ QEIIEFP+V++S +G +E+ F +YV+P +LS F
Sbjct: 30 QRFSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAF 89
Query: 154 CKDLTGIQQIQVDRGVTLSEALLRHDKWL----ENKGI---KNTNFAV--------VTWS 198
C +LTGI Q QVD L L R +WL E +G+ +++ A VTWS
Sbjct: 90 CTELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWS 149
Query: 199 NWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAH 258
+WD V L EC+ K++ P WI+L+ + + L+ A+ G+ + GR H
Sbjct: 150 DWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREH 209
Query: 259 CGLDDAKNTARLLALLMHRGFKFSITN 285
GL DA+NTA L +M G + SIT+
Sbjct: 210 SGLVDARNTALLAQRMMTDGCQLSITS 236
Score = 79 (32.9 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 309 PHQLHKQMD-LQNSIFQYHPSCFCGVKSSKGMVRKPGPKQGSVFFGCGNW-TVTRGARCH 366
P +H L+ + P C CG ++ + V GP G VF+ C + T C
Sbjct: 467 PLSVHAHTHALKQKVKVTSPLCVCGRRARRLTVGNGGPNHGRVFYCCPRRRSNTHTHTCD 526
Query: 367 FFEW 370
FF+W
Sbjct: 527 FFQW 530
>UNIPROTKB|F1P8R6 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OMA:ALDCLPM EMBL:AAEX03004472 Ensembl:ENSCAFT00000028477
Uniprot:F1P8R6
Length = 658
Score = 325 (119.5 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 73/192 (38%), Positives = 112/192 (58%)
Query: 112 KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTL 171
K+ QEI+EFP+V++++ TG++E+ F YV+P + +LS+FC +LTGI+Q QVD GV L
Sbjct: 51 KHHQSQEIVEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSEFCMELTGIKQAQVDEGVPL 110
Query: 172 SEALLRHDKWLEN----------KGIKNTN------FAVVTWSNWDCRVMLESECRFKKI 215
L + KW++ GI + + A VTWS+WD V LE EC+ K++
Sbjct: 111 RICLSQFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAFVTWSDWDLGVCLEYECKRKQL 170
Query: 216 WKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 275
KP + N WI+L+V + + L A++ G+ + G+ H GLDD++NTA L ++
Sbjct: 171 LKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGQEHSGLDDSRNTAMLAWKMI 230
Query: 276 HRGFKFSITNSL 287
G IT SL
Sbjct: 231 RDGCLMKITRSL 242
Score = 231 (86.4 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q F Y +VIDFE+TC D K+ QEI+EFP+V++++ TG++E+ F YV+P +
Sbjct: 28 SKSKQLFDYLIVIDFESTCWNDGKHHQSQEIVEFPAVLLNTSTGEIESEFHAYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE 183
+LS+FC +LTGI+Q QVD GV L L + KW++
Sbjct: 88 VLSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQ 122
Score = 84 (34.6 bits), Expect = 6.9e-35, Sum P(2) = 6.9e-35
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 327 PSCFCGVKSSKGMVRKPGPKQGSVFFGC--GNWTVTRGARCHFFEWAFTTA 375
P C CG +S + +V GP G VF+ C G + R C +F+W +A
Sbjct: 583 PLCKCGRRSKRLVVTNNGPNHGKVFYCCPVGKYQENRKC-CGYFKWEQASA 632
>MGI|MGI:1918401 [details] [associations]
symbol:Eri2 "exoribonuclease 2" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918401 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 GeneTree:ENSGT00530000063205
HSSP:Q8IV48 CTD:112479 HOVERGEN:HBG097018 EMBL:AK029056
EMBL:AK135821 EMBL:AK160698 EMBL:AK165163 EMBL:BC090961
IPI:IPI00404329 RefSeq:NP_081974.3 UniGene:Mm.274160
ProteinModelPortal:Q5BKS4 SMR:Q5BKS4 PhosphoSite:Q5BKS4
PRIDE:Q5BKS4 Ensembl:ENSMUST00000150844 GeneID:71151 KEGG:mmu:71151
UCSC:uc009jlu.2 InParanoid:Q5BKS4 NextBio:333139 Bgee:Q5BKS4
Genevestigator:Q5BKS4 Uniprot:Q5BKS4
Length = 688
Score = 329 (120.9 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 73/186 (39%), Positives = 108/186 (58%)
Query: 118 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 177
EIIEFP+V++++ TG++E+ F YV+P + +LS+FC +LTGI+Q+QVD GV L L +
Sbjct: 57 EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQ 116
Query: 178 HDKWLENKGIKNT-NFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYF 221
KW+ + T +FA VTWS+WD V LE ECR K++ KP +
Sbjct: 117 FCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLLKPVFL 176
Query: 222 NRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 281
N WI+L+ + + L A++ G+ + GR H GLDD++NTA L ++ G
Sbjct: 177 NSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLM 236
Query: 282 SITNSL 287
IT SL
Sbjct: 237 KITRSL 242
Score = 225 (84.3 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 46/106 (43%), Positives = 71/106 (66%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q + Y +V+DFE+TC D K+ EIIEFP+V++++ TG++E+ F YV+P +
Sbjct: 28 SRLKQLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFA 193
+LS+FC +LTGI+Q+QVD GV L L + KW+ + T +FA
Sbjct: 88 ILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFA 133
Score = 79 (32.9 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 327 PSCFCGVKSSKGMVRKPGPKQGSVFFGC--GNWTVTRGARCHFFEWAFT 373
P C CG +S + +V GP G F+ C G + R C +F+W T
Sbjct: 592 PLCKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDRKC-CGYFKWEQT 639
>UNIPROTKB|A6QLH5 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 EMBL:BC147967 IPI:IPI00692999
RefSeq:NP_001106713.1 UniGene:Bt.5101 ProteinModelPortal:A6QLH5
Ensembl:ENSBTAT00000020671 GeneID:540516 KEGG:bta:540516 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 InParanoid:A6QLH5
OMA:FPALTEH OrthoDB:EOG4ZKJMJ NextBio:20878677 ArrayExpress:A6QLH5
Uniprot:A6QLH5
Length = 337
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 86/214 (40%), Positives = 125/214 (58%)
Query: 78 HDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 137
H FG+ S S PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HSFGA-SMAAMMSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIEST 183
Query: 138 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VV 195
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N V
Sbjct: 184 FHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFV 243
Query: 196 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM-AGLAW 253
T +WD +VML +C++ + YF +WINLK + G C K + +M GL+
Sbjct: 244 TCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSL 300
Query: 254 Q--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 301 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334
>RGD|1583889 [details] [associations]
symbol:Eri2 "ERI1 exoribonuclease family member 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
RGD:1583889 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OrthoDB:EOG4F1X2H CTD:112479 OMA:ALDCLPM IPI:IPI00958369
RefSeq:NP_001178043.1 UniGene:Rn.198513 ProteinModelPortal:D4A625
Ensembl:ENSRNOT00000019747 GeneID:691484 KEGG:rno:691484
UCSC:RGD:1583889 NextBio:743149 Uniprot:D4A625
Length = 687
Score = 328 (120.5 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 72/186 (38%), Positives = 108/186 (58%)
Query: 118 EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLR 177
EIIEFP+V++++ TG++E+ F YV+P + +LS+FC +LTGI+Q+QVD GV L L +
Sbjct: 57 EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEGVPLKICLSQ 116
Query: 178 HDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPYF 221
KW+ + K +FA VTWS+WD V LE EC+ K++ KP +
Sbjct: 117 FCKWIHKLQQQKKISFATGDSEPSTPEVKPCAFVTWSDWDLGVCLEYECKRKQLLKPVFL 176
Query: 222 NRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKF 281
N WI+L+ + + L A++ G+ + GR H GLDD++NTA L ++ G
Sbjct: 177 NSWIDLRATYKLFYNRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLM 236
Query: 282 SITNSL 287
IT SL
Sbjct: 237 KITRSL 242
Score = 225 (84.3 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 45/102 (44%), Positives = 69/102 (67%)
Query: 94 QEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 152
Q + Y +V+DFE+TC D K+ EIIEFP+V++++ TG++E+ F YV+P + +LS+
Sbjct: 32 QLYDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91
Query: 153 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFA 193
FC +LTGI+Q+QVD GV L L + KW+ + K +FA
Sbjct: 92 FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQKKISFA 133
Score = 79 (32.9 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 307 LPPHQLHKQMDLQN---SIFQYHPSCFCGVKSSKGMVRKPGPKQGSVFFGC--GNWTVTR 361
+PP L ++LQ + P C CG +S + +V GP G F+ C G + +
Sbjct: 569 VPPSVLTSTVNLQEPWKTGKMTPPLCKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQEDK 628
Query: 362 GARCHFFEWAFT 373
+ C +F+W T
Sbjct: 629 KS-CSYFKWEQT 639
>UNIPROTKB|O43414 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 EMBL:AL035417 CTD:79033 HOVERGEN:HBG108293
OrthoDB:EOG4ZKJMJ EMBL:AF007157 EMBL:AK290567 EMBL:AL390776
EMBL:AC004254 EMBL:BC001072 EMBL:BC004456 IPI:IPI00020701
IPI:IPI00644349 IPI:IPI00888358 RefSeq:NP_076971.1
UniGene:Hs.731413 PDB:2XRI PDBsum:2XRI ProteinModelPortal:O43414
SMR:O43414 STRING:O43414 PhosphoSite:O43414 PaxDb:O43414
PRIDE:O43414 DNASU:79033 Ensembl:ENST00000372257
Ensembl:ENST00000372259 GeneID:79033 KEGG:hsa:79033 UCSC:uc001clt.3
GeneCards:GC01M044686 HGNC:HGNC:17276 HPA:HPA027147 MIM:609917
neXtProt:NX_O43414 PharmGKB:PA164719272 EvolutionaryTrace:O43414
GenomeRNAi:79033 NextBio:67747 ArrayExpress:O43414 Bgee:O43414
CleanEx:HS_ERI3 Genevestigator:O43414 Uniprot:O43414
Length = 337
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 86/214 (40%), Positives = 125/214 (58%)
Query: 78 HDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 137
H FG+ S S PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HGFGA-SMAAMVSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIEST 183
Query: 138 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VV 195
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N V
Sbjct: 184 FHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFV 243
Query: 196 TWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM-AGLAW 253
T +WD +VML +C++ + YF +WINLK + G C K + +M GL+
Sbjct: 244 TCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSL 300
Query: 254 Q--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 301 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334
>UNIPROTKB|E2RAN5 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:79033 OMA:FPALTEH
EMBL:AAEX03009798 EMBL:AAEX03009797 RefSeq:XP_850849.2
Ensembl:ENSCAFT00000007745 GeneID:475384 KEGG:cfa:475384
Uniprot:E2RAN5
Length = 337
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 85/215 (39%), Positives = 125/215 (58%)
Query: 78 HDFG-SWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 136
H FG S + P PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HGFGASMAAMVPFP--PQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIES 182
Query: 137 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--V 194
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 183 TFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIF 242
Query: 195 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM-AGLA 252
VT +WD +VML +C++ + YF +WINLK + G C K + +M GL+
Sbjct: 243 VTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLS 299
Query: 253 WQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
Q GR H G+DD KN A ++ L ++GF F T+
Sbjct: 300 LQHIGRPHSGIDDCKNIANIMKTLAYQGFIFKQTS 334
>MGI|MGI:2153887 [details] [associations]
symbol:Eri3 "exoribonuclease 3" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2153887
GO:GO:0005886 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HSSP:Q8IV48 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 OMA:FPALTEH
OrthoDB:EOG4ZKJMJ EMBL:AK083017 EMBL:AK144107 EMBL:AL645740
EMBL:AL671520 EMBL:BC079640 EMBL:BC116685 EMBL:BC117540
EMBL:AY029599 IPI:IPI00225264 IPI:IPI00471104 IPI:IPI00649884
RefSeq:NP_536717.2 UniGene:Mm.235891 ProteinModelPortal:Q8C460
SMR:Q8C460 STRING:Q8C460 PhosphoSite:Q8C460 PaxDb:Q8C460
PRIDE:Q8C460 DNASU:140546 Ensembl:ENSMUST00000037127
Ensembl:ENSMUST00000125312 Ensembl:ENSMUST00000144373 GeneID:140546
KEGG:mmu:140546 UCSC:uc008uis.1 UCSC:uc008uit.1 InParanoid:Q8C460
ChiTaRS:ERI3 NextBio:369851 Bgee:Q8C460 CleanEx:MM_PRNPIP1
Genevestigator:Q8C460 Uniprot:Q8C460
Length = 337
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 85/215 (39%), Positives = 124/215 (57%)
Query: 78 HDFGS-WSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 136
H FG+ + P PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HGFGAAMAAMVPFP--PQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIES 182
Query: 137 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--V 194
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 183 TFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIF 242
Query: 195 VTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM-AGLA 252
VT +WD +VML +C + + YF +WINLK + G C K + +M GL+
Sbjct: 243 VTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLS 299
Query: 253 WQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 300 LQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 334
>UNIPROTKB|E1BJE4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 Pfam:PF00929 GO:GO:0008270
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02057647 IPI:IPI00687052
ProteinModelPortal:E1BJE4 Ensembl:ENSBTAT00000008456 OMA:ALDCLPM
Uniprot:E1BJE4
Length = 689
Score = 321 (118.1 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 72/187 (38%), Positives = 109/187 (58%)
Query: 117 QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALL 176
QE++EFP+V++++ TG++E+ F YV+P + +LS+FC +LTGI+Q QVD GV L L
Sbjct: 56 QEVVEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFCVELTGIKQAQVDEGVPLKICLS 115
Query: 177 RHDKWLEN-KGIKNTNFAV---------------VTWSNWDCRVMLESECRFKKIWKPPY 220
+ KW++ + K FA VTWS+WD V LE EC+ K++ KP +
Sbjct: 116 QFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVF 175
Query: 221 FNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGFK 280
N WI+L+V + + L A++ G+ + GR H GLDD++NTA L ++ G
Sbjct: 176 LNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGREHFGLDDSRNTALLAWKMIRDGCL 235
Query: 281 FSITNSL 287
IT SL
Sbjct: 236 MKITRSL 242
Score = 228 (85.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 43/95 (45%), Positives = 66/95 (69%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q F Y ++IDFE+TC D K QE++EFP+V++++ TG++E+ F YV+P +
Sbjct: 28 SKSKQLFDYLIIIDFESTCWNDGKRHRSQEVVEFPAVLLNTSTGEIESEFHAYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE 183
+LS+FC +LTGI+Q QVD GV L L + KW++
Sbjct: 88 ILSEFCVELTGIKQAQVDEGVPLKICLSQFCKWIQ 122
Score = 81 (33.6 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 327 PSCFCGVKSSKGMVRKPGPKQGSVFFGC--GNWTVTRGARCHFFEWAFT 373
P C CG +S + V GP G VF+ C G + R C +F+W T
Sbjct: 593 PLCKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKRKC-CGYFKWEQT 640
>UNIPROTKB|Q8IV48 [details] [associations]
symbol:ERI1 "3'-5' exoribonuclease 1" species:9606 "Homo
sapiens" [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0031125 "rRNA 3'-end processing"
evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337
Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513
Pfam:PF00929 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
DrugBank:DB00131 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 EMBL:AY310909 EMBL:AK291062 EMBL:AL137679
EMBL:BC035279 IPI:IPI00216873 PIR:T46432 RefSeq:NP_699163.2
UniGene:Hs.20000 PDB:1W0H PDB:1ZBH PDB:1ZBU PDBsum:1W0H PDBsum:1ZBH
PDBsum:1ZBU ProteinModelPortal:Q8IV48 SMR:Q8IV48 STRING:Q8IV48
PhosphoSite:Q8IV48 DMDM:45476938 PaxDb:Q8IV48 PeptideAtlas:Q8IV48
PRIDE:Q8IV48 DNASU:90459 Ensembl:ENST00000250263
Ensembl:ENST00000519292 Ensembl:ENST00000523898 GeneID:90459
KEGG:hsa:90459 UCSC:uc003wsk.2 CTD:90459 GeneCards:GC08P008900
HGNC:HGNC:23994 HPA:CAB033838 MIM:608739 neXtProt:NX_Q8IV48
PharmGKB:PA164719226 HOGENOM:HOG000006635 HOVERGEN:HBG048925
InParanoid:Q8IV48 OMA:ICVIDFE OrthoDB:EOG4NGGN1 PhylomeDB:Q8IV48
EvolutionaryTrace:Q8IV48 GenomeRNAi:90459 NextBio:76770
ArrayExpress:Q8IV48 Bgee:Q8IV48 CleanEx:HS_ERI1
Genevestigator:Q8IV48 GermOnline:ENSG00000104626 GO:GO:0071204
GO:GO:0071207 Uniprot:Q8IV48
Length = 349
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 71/196 (36%), Positives = 111/196 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
LTGI Q QVDR T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 ISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLS 246
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
++ PP+ +WIN++ + + R K + E G+ + GR HCGLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIA 306
Query: 272 ALLMHRGFKFSITNSL 287
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>UNIPROTKB|E2QU14 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 CTD:90459 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 EMBL:AAEX03010431 RefSeq:XP_539997.2
Ensembl:ENSCAFT00000010754 GeneID:482882 KEGG:cfa:482882
NextBio:20857381 Uniprot:E2QU14
Length = 349
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 71/196 (36%), Positives = 110/196 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSDFC 186
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
+LTGI Q QVDR T + L + W++ K + + ++T +WD L +CR
Sbjct: 187 INLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCRLS 246
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 272 ALLMHRGFKFSITNSL 287
++ G + I +
Sbjct: 307 VRMLQDGCELRINEKM 322
>WB|WBGene00019724 [details] [associations]
symbol:M02B7.2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353 EMBL:FO081251
PIR:T29900 RefSeq:NP_500418.1 ProteinModelPortal:Q94285 SMR:Q94285
STRING:Q94285 PaxDb:Q94285 EnsemblMetazoa:M02B7.2 GeneID:187397
KEGG:cel:CELE_M02B7.2 UCSC:M02B7.2 CTD:187397 WormBase:M02B7.2
InParanoid:Q94285 OMA:CTWINIK NextBio:935118 Uniprot:Q94285
Length = 266
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 86/213 (40%), Positives = 113/213 (53%)
Query: 80 FGSWSTFYPD-SQK-PQEFQYFVVIDFEATC-DKDKNP-YP-QEIIEFPSVIVSSVTGQL 134
+ S+S P +QK Q F Y +V+DFEATC D K P +P QEIIEFP V +S+
Sbjct: 40 YPSFSVKKPTKNQKISQHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSE 99
Query: 135 EACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFA 193
F Y++PT L+ FC LT I Q VD L E L D WL E+ +K NFA
Sbjct: 100 IRRFHQYIKPTEFPRLTSFCTSLTRIIQEMVDEKPKLPEVLSEFDSWLKEDSRLKQGNFA 159
Query: 194 VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAW 253
VT +WD +V L SE +FK I P YFN+WIN+K + E + + + + L
Sbjct: 160 FVTCGDWDLKVALPSEAKFKNIEIPEYFNQWINVKKAYAEHTNHFAKGMTQLLAIYKLQH 219
Query: 254 QGRAHCGLDDAKNTARLLALLMHRGFKFSITNS 286
QGR H G+DD N ++ L G + IT S
Sbjct: 220 QGRLHSGIDDVANICEIVRCLGRDGHNYRITGS 252
>UNIPROTKB|I3LQQ1 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 Ensembl:ENSSSCT00000031051 Uniprot:I3LQQ1
Length = 313
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 69/196 (35%), Positives = 111/196 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 91 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 150
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +CR
Sbjct: 151 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCRLS 210
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 211 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 270
Query: 272 ALLMHRGFKFSITNSL 287
++ G + + +
Sbjct: 271 VRMLQDGCELRVNEKM 286
>WB|WBGene00019825 [details] [associations]
symbol:R02D3.8 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO081663
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353
OMA:PYFMEWI PIR:T15066 PIR:T28707 RefSeq:NP_499887.1
ProteinModelPortal:Q9TZZ9 SMR:Q9TZZ9 STRING:Q9TZZ9
EnsemblMetazoa:R02D3.8 GeneID:176845 KEGG:cel:CELE_R02D3.8
UCSC:R02D3.8 CTD:176845 WormBase:R02D3.8 InParanoid:Q9TZZ9
NextBio:894262 Uniprot:Q9TZZ9
Length = 266
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/203 (41%), Positives = 110/203 (54%)
Query: 90 SQK-PQEFQYFVVIDFEATC-DKDKNP-YP-QEIIEFPSVIVSSVTGQLEACFQTYVRPT 145
+QK Q F Y +V+DFEATC D K P +P QEIIEFP V +S+ F YV+PT
Sbjct: 51 NQKMSQHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPT 110
Query: 146 -CNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCR 203
C +L S FC LTGI Q VD TL + L D WL E+ ++ FA VT +WD +
Sbjct: 111 ECPRLTS-FCTSLTGIIQEMVDEKPTLPQVLSEFDSWLKEDSRLEKGKFAFVTCGDWDLK 169
Query: 204 VMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDD 263
V L +E +FK I P YFN+WIN+K E + + + + L QGR H G+DD
Sbjct: 170 VALPNEAKFKNIGIPEYFNQWINVKKASAEHTNHFAKGIAQLLAIYKLQHQGRHHSGIDD 229
Query: 264 AKNTARLLALLMHRGFKFSITNS 286
N ++ L G + IT S
Sbjct: 230 VANICEIVRCLGMNGHNYQITGS 252
>UNIPROTKB|Q32LA2 [details] [associations]
symbol:THEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOVERGEN:HBG048925
OMA:ICVIDFE EMBL:DAAA02060421 EMBL:BC109681 IPI:IPI00692488
RefSeq:NP_001033281.1 UniGene:Bt.22450 SMR:Q32LA2
Ensembl:ENSBTAT00000012775 GeneID:540728 KEGG:bta:540728
InParanoid:Q32LA2 NextBio:20878798 Uniprot:Q32LA2
Length = 349
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 68/196 (34%), Positives = 111/196 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y +IDFEATC++ P + EIIEFP V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
++ PP+ +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 306
Query: 272 ALLMHRGFKFSITNSL 287
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>MGI|MGI:1914526 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IDA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=IDA] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IDA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 MGI:MGI:1914526 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175
GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OrthoDB:EOG4NGGN1
GO:GO:0071204 GO:GO:0071207 EMBL:AK014041 EMBL:AK014410
EMBL:AK050230 EMBL:AK165026 EMBL:AK172005 EMBL:BC046412
IPI:IPI00330329 RefSeq:NP_080343.4 UniGene:Mm.207534
ProteinModelPortal:Q7TMF2 SMR:Q7TMF2 STRING:Q7TMF2
PhosphoSite:Q7TMF2 PRIDE:Q7TMF2 Ensembl:ENSMUST00000033927
GeneID:67276 KEGG:mmu:67276 UCSC:uc009lky.2 InParanoid:Q3TNT0
NextBio:324080 Bgee:Q7TMF2 CleanEx:MM_THEX1 Genevestigator:Q7TMF2
GermOnline:ENSMUSG00000031527 Uniprot:Q7TMF2
Length = 345
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/198 (34%), Positives = 111/198 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 153
+ Y +IDFEATC++ NP + EIIEFP V++++ T ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCEEG-NPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEF 181
Query: 154 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 212
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +CR
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQCRL 241
Query: 213 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 270
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 271 LALLMHRGFKFSITNSLM 288
++ G + I ++
Sbjct: 302 AVRMLQDGCELRINEKIL 319
>DICTYBASE|DDB_G0283113 [details] [associations]
symbol:eriA "RNA exonuclease" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0283113
Pfam:PF00929 GenomeReviews:CM000153_GR GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AAFI02000050
eggNOG:COG5018 RefSeq:XP_639244.1 ProteinModelPortal:Q54RJ2
EnsemblProtists:DDB0231961 GeneID:8623930 KEGG:ddi:DDB_G0283113
InParanoid:Q54RJ2 OMA:KRHEMEI ProtClustDB:CLSZ2728980
Uniprot:Q54RJ2
Length = 220
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 70/211 (33%), Positives = 116/211 (54%)
Query: 82 SWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYP-QEIIEFPSVIVSSVTGQLEACFQT 140
S S+ P + Q+F+Y +V+DFEATC+KD +P QEIIEFPSVI+++ T + + F+
Sbjct: 7 STSSSTPTTSVKQKFKYLIVLDFEATCEKDVK-FPNQEIIEFPSVIINTETLETVSTFRE 65
Query: 141 YVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-EN--KGIKNTNFAVVTW 197
YV+P N LS FC +LTGI+Q V+ + L H W E+ K I++ + V
Sbjct: 66 YVKPIINPNLSKFCTELTGIKQETVENAALFPDVLKSHCDWFFESLPKDIQSDEYCFVCC 125
Query: 198 SNWDCRVMLESECRF-KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 256
+WD L + + + KP Y ++WIN+K + + + + + +GR
Sbjct: 126 GDWDLLQCLPKQLKLCNNLSKPSYLSKWINIKKQYTLFYNRPSFGMTNMLRELNIPLEGR 185
Query: 257 AHCGLDDAKNTARLLALLMHRGFKFSITNSL 287
HCGL D+ N +++L ++ G F + +++
Sbjct: 186 HHCGLSDSLNISKILKRMIEEGCNFDLVSTM 216
>ZFIN|ZDB-GENE-050522-39 [details] [associations]
symbol:eri1 "exoribonuclease 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 SMART:SM00479 SMART:SM00513
Pfam:PF00929 ZFIN:ZDB-GENE-050522-39 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOGENOM:HOG000006635
HOVERGEN:HBG048925 EMBL:BX511222 EMBL:BC095343 IPI:IPI00631298
RefSeq:NP_001018450.1 UniGene:Dr.15106 SMR:Q503G0
Ensembl:ENSDART00000065671 GeneID:553641 KEGG:dre:553641
InParanoid:Q503G0 NextBio:20880375 Uniprot:Q503G0
Length = 337
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 68/196 (34%), Positives = 106/196 (54%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
F Y V+DFEATC+++ P Y EIIEFP V++ + T ++ FQ YV+P + LS+FC
Sbjct: 115 FDYICVVDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSEFC 174
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
LTGI Q VD T + L R WL+ K + + +T +WD L ++C+
Sbjct: 175 VKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQCKLS 234
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEA--VEMAGLAWQGRAHCGLDDAKNTARLL 271
+I P + +WIN++ + + R K +E G+ + GR HCGLDD++N AR+
Sbjct: 235 RIRYPQFARKWINIRKSYGNFYKVPRTQTKLICMLENLGMEYDGRPHCGLDDSRNIARIA 294
Query: 272 ALLMHRGFKFSITNSL 287
++ G + + L
Sbjct: 295 IHMLKDGCQLRVNECL 310
>RGD|1308378 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO;ISS]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA
3'-end processing" evidence=ISO;ISS] [GO:0043022 "ribosome binding"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISO;ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISO;ISS] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828
IPI:IPI00364660 RefSeq:NP_001014165.1 UniGene:Rn.17469
ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:Q5FVR4 PRIDE:Q5FVR4
Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159
UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391
Genevestigator:Q5FVR4 GermOnline:ENSRNOG00000011448 Uniprot:Q5FVR4
Length = 345
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 68/197 (34%), Positives = 110/197 (55%)
Query: 96 FQYFVVIDFEATCDKDKNP--YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 153
+ Y +IDFEATC++ NP + EIIEFP V++++ + ++E FQ YVRP N LS+F
Sbjct: 123 YDYICIIDFEATCEEG-NPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEF 181
Query: 154 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRF 212
C LTGI Q QVDR + L + +W+++K + + ++T +WD L +C+
Sbjct: 182 CIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQL 241
Query: 213 KKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARL 270
++ P + +WIN++ + + R K + E G+ + GR H GLDD+KN AR+
Sbjct: 242 SRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARI 301
Query: 271 LALLMHRGFKFSITNSL 287
++ G + I L
Sbjct: 302 AVRMLQDGCELRINEKL 318
>UNIPROTKB|G3MZQ7 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02070439
Ensembl:ENSBTAT00000064195 OMA:PQLSKFC Uniprot:G3MZQ7
Length = 349
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/196 (33%), Positives = 110/196 (56%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y +IDFEATC++ P + EIIEF V++++ T ++E FQ YVRP N LSDFC
Sbjct: 127 YDYICIIDFEATCEEGNPPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 186
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
+LTGI Q QVD+ T + L + W++ K + ++++T +WD L +C+
Sbjct: 187 INLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQLS 246
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
++ PP+ +WI+++ + + R +K + E G+ + G H GLDD+KN AR+
Sbjct: 247 RLKYPPFAKKWISIQKSYGNFYKVPRSQIKLTIMLEKLGMDYDGWPHSGLDDSKNVARIA 306
Query: 272 ALLMHRGFKFSITNSL 287
++ G + + +
Sbjct: 307 VRMLQDGCELRVNEKM 322
>UNIPROTKB|Q5ZL01 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 Gene3D:1.10.720.30
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408
KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205
CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:AADN02009127
EMBL:AJ719933 IPI:IPI00571536 RefSeq:NP_001006450.1
UniGene:Gga.2609 SMR:Q5ZL01 Ensembl:ENSGALT00000018669
GeneID:422629 KEGG:gga:422629 InParanoid:Q5ZL01 NextBio:20825234
Uniprot:Q5ZL01
Length = 327
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/196 (33%), Positives = 107/196 (54%)
Query: 96 FQYFVVIDFEATCDKDKNP-YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFC 154
+ Y V+DFEATC++ P + EIIEFP V++++ T ++E FQ YV+P N LS+FC
Sbjct: 105 YDYICVVDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINPKLSEFC 164
Query: 155 KDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNT-NFAVVTWSNWDCRVMLESECRFK 213
LTGI Q VD+ T + L W+ + + ++ ++T +WD L +CR
Sbjct: 165 VGLTGITQDIVDKADTFPQVLQNVVDWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCRVS 224
Query: 214 KIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV--EMAGLAWQGRAHCGLDDAKNTARLL 271
+I P + +WIN++ + + R K + E G+++ GR H GLDD+KN AR+
Sbjct: 225 RIKHPSFAKKWINIRKSYGNFYKVPRNQTKLMIMLEKLGMSYDGRPHSGLDDSKNIARIA 284
Query: 272 ALLMHRGFKFSITNSL 287
++ G + + +
Sbjct: 285 IRMLQDGCQLRVNEKM 300
>WB|WBGene00001332 [details] [associations]
symbol:eri-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0048609 "multicellular organismal
reproductive process" evidence=IMP] [GO:0006401 "RNA catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP;IDA]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP;IDA] [GO:0007281 "germ cell development"
evidence=IGI;IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0005737 GO:GO:0008406
GO:GO:0002119 GO:GO:0016246 GO:GO:0003676 GO:GO:0003723
GO:GO:0006401 GO:GO:0009790 GO:GO:0048609 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0045132 GO:GO:0000175 eggNOG:COG5018
GeneTree:ENSGT00530000063205 GO:GO:0000467 EMBL:FO081716 PIR:T32575
PIR:T32576 RefSeq:NP_741292.1 RefSeq:NP_741293.1
ProteinModelPortal:O44406 SMR:O44406 IntAct:O44406 STRING:O44406
PaxDb:O44406 PRIDE:O44406 EnsemblMetazoa:T07A9.5b GeneID:176868
KEGG:cel:CELE_T07A9.5 UCSC:T07A9.5b CTD:176868 WormBase:T07A9.5a
WormBase:T07A9.5b HOGENOM:HOG000020044 InParanoid:O44406
OMA:LIDVREM NextBio:894366 Uniprot:O44406
Length = 582
Score = 296 (109.3 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 74/216 (34%), Positives = 105/216 (48%)
Query: 88 PDSQKPQEF-QYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 146
P++ K F Y + IDFE TC + YP EIIE P+V++ ++ + F+TYVRP
Sbjct: 139 PNADKTARFFDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVR 198
Query: 147 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRV 204
N LS+FC T I Q VD EAL R W+ N G KN+ FA VT D
Sbjct: 199 NPKLSEFCMQFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWK 258
Query: 205 MLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHC 259
++ +C I P F +IN+K F E F G+ + ++ +E L++ G H
Sbjct: 259 FMQFQCLLSNIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHS 318
Query: 260 GLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGS 295
GLDDA N A + +M + I ++ N S
Sbjct: 319 GLDDATNIAAIAIQMMKLKIELRINQKCSYKENQRS 354
>UNIPROTKB|H0Y4B0 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
EMBL:AL390776 HGNC:HGNC:17276 ProteinModelPortal:H0Y4B0 SMR:H0Y4B0
PRIDE:H0Y4B0 Ensembl:ENST00000456170 Bgee:H0Y4B0 Uniprot:H0Y4B0
Length = 204
Score = 222 (83.2 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 45/114 (39%), Positives = 69/114 (60%)
Query: 117 QEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALL 176
QEIIEFP + ++ T ++E+ F YV+P + L+ FC +LTGI Q VD +L + L
Sbjct: 2 QEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 61
Query: 177 RHDKWLENKGIKNTNFA--VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLK 228
R D+W+ +G+ + N VT +WD +VML +C++ + YF +WINLK
Sbjct: 62 RVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLK 115
Score = 84 (34.6 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 250 GLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 164 GLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 201
>UNIPROTKB|F1ML00 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 UniGene:Bt.5101 EMBL:DAAA02009029
EMBL:DAAA02009030 IPI:IPI00903627 ProteinModelPortal:F1ML00
SMR:F1ML00 Ensembl:ENSBTAT00000034295 ArrayExpress:F1ML00
Uniprot:F1ML00
Length = 160
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 59/159 (37%), Positives = 89/159 (55%)
Query: 133 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 192
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 193 A--VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM- 248
VT +WD +VML +C++ + YF +WINLK + G C K + +M
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 249 AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 157
>UNIPROTKB|B4DEX5 [details] [associations]
symbol:ERI3 "Prion protein interacting protein, isoform
CRA_d" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
EMBL:CH471059 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
HOGENOM:HOG000218353 EMBL:AL390776 IPI:IPI00644349
UniGene:Hs.731413 HGNC:HGNC:17276 EMBL:AK293833 SMR:B4DEX5
STRING:B4DEX5 Ensembl:ENST00000537474 UCSC:uc010okv.2
HOVERGEN:HBG058704 Uniprot:B4DEX5
Length = 160
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 59/159 (37%), Positives = 89/159 (55%)
Query: 133 QLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNF 192
++E+ F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 193 A--VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAV-EM- 248
VT +WD +VML +C++ + YF +WINLK + G C K + +M
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 249 AGLAWQ--GRAHCGLDDAKNTARLLALLMHRGFKFSITN 285
GL+ Q GR H G+DD KN A ++ L +RGF F T+
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTS 157
>RGD|1595859 [details] [associations]
symbol:Eri3 "ERI1 exoribonuclease family member 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 RGD:1595859
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 OrthoDB:EOG4ZKJMJ IPI:IPI00769247
ProteinModelPortal:D4AA56 Ensembl:ENSRNOT00000026222
UCSC:RGD:1595859 Uniprot:D4AA56
Length = 253
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 78 HDFG-SWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEA 136
H FG S + P PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HGFGASMAAMVPFP--PQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIES 182
Query: 137 CFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--V 194
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N
Sbjct: 183 TFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIF 242
Query: 195 VTWSNWDCRVM 205
VT +WD +VM
Sbjct: 243 VTCGDWDLKVM 253
>UNIPROTKB|F1NBT2 [details] [associations]
symbol:F1NBT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:AADN02012702
IPI:IPI00601169 Ensembl:ENSGALT00000016435 OMA:ISXNISK
Uniprot:F1NBT2
Length = 222
Score = 248 (92.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 54/130 (41%), Positives = 80/130 (61%)
Query: 78 HDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 137
H FG+ S S PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 95 HGFGA-SMAAMSSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIEST 152
Query: 138 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VV 195
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + + V
Sbjct: 153 FHMYVQPVVHPQLTPFCTELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFV 212
Query: 196 TWSNWDCRVM 205
T +WD +VM
Sbjct: 213 TCGDWDLKVM 222
>UNIPROTKB|F6UGJ8 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI01011710 ProteinModelPortal:F6UGJ8 SMR:F6UGJ8
Ensembl:ENST00000457571 ArrayExpress:F6UGJ8 Bgee:F6UGJ8
Uniprot:F6UGJ8
Length = 250
Score = 248 (92.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 78 HDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 137
H FG+ S S PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 124 HGFGA-SMAAMVSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIEST 181
Query: 138 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VV 195
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N V
Sbjct: 182 FHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFV 241
Query: 196 TWSNWDCRV 204
T +WD +V
Sbjct: 242 TCGDWDLKV 250
>UNIPROTKB|F1S331 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:FPALTEH
EMBL:CU929772 Ensembl:ENSSSCT00000004352 Uniprot:F1S331
Length = 252
Score = 248 (92.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 78 HDFGSWSTFYPDSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEAC 137
H FG+ S S PQ + YF+V+DFEATCDK + +PQEIIEFP + ++ T ++E+
Sbjct: 126 HGFGA-SMAAMVSFPPQRYHYFLVLDFEATCDKPQI-HPQEIIEFPILKLNGRTMEIEST 183
Query: 138 FQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFA--VV 195
F YV+P + L+ FC +LTGI Q VD +L + L R D+W+ +G+ + N V
Sbjct: 184 FHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFV 243
Query: 196 TWSNWDCRV 204
T +WD +V
Sbjct: 244 TCGDWDLKV 252
>UNIPROTKB|H3BN77 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC002394 HGNC:HGNC:30541
ProteinModelPortal:H3BN77 SMR:H3BN77 Ensembl:ENST00000568805
Bgee:H3BN77 Uniprot:H3BN77
Length = 156
Score = 244 (91.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q F Y +VIDFE+TC D K+ + QEIIEFP+V++++ TGQ+++ FQ YV+P +
Sbjct: 28 SKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEN-KGIKNTNFA 193
+LS+FC +LTGI+Q QVD GV L L + KW+ + KN FA
Sbjct: 88 ILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFA 133
>UNIPROTKB|F6QUN3 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI00943355 ProteinModelPortal:F6QUN3 SMR:F6QUN3
Ensembl:ENST00000452396 ArrayExpress:F6QUN3 Bgee:F6QUN3
Uniprot:F6QUN3
Length = 176
Score = 226 (84.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 46/124 (37%), Positives = 72/124 (58%)
Query: 115 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA 174
+P EIIEFP + ++ T ++E+ F YV+P + L+ FC +LTGI Q VD +L +
Sbjct: 43 HPGEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQV 102
Query: 175 LLRHDKWLENKGIKNTNFA--VVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFH 232
L R D+W+ +G+ + N VT +WD +VML +C++ + YF +WINLK +
Sbjct: 103 LERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS 162
Query: 233 EVFG 236
G
Sbjct: 163 FAMG 166
>TAIR|locus:2083636 [details] [associations]
symbol:AT3G15140 "AT3G15140" species:3702 "Arabidopsis
thaliana" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
HSSP:Q8IV48 HOGENOM:HOG000218353 EMBL:AP001299 EMBL:AF419612
EMBL:AY079112 IPI:IPI00525491 RefSeq:NP_566502.1 UniGene:At.27380
ProteinModelPortal:Q8W566 SMR:Q8W566 EnsemblPlants:AT3G15140.1
GeneID:820745 KEGG:ath:AT3G15140 TAIR:At3g15140 InParanoid:Q8W566
OMA:PYFMEWI PhylomeDB:Q8W566 ProtClustDB:CLSN2688393
Genevestigator:Q8W566 Uniprot:Q8W566
Length = 337
Score = 231 (86.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 58/208 (27%), Positives = 97/208 (46%)
Query: 89 DSQKPQEFQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--C 146
+ +K QEF +F+VID E EI+EFP +IV + T ++ F +VRPT
Sbjct: 119 ERKKSQEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMS 169
Query: 147 NQLLSDFCKDL---TGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNF-----AVVT 196
Q ++ + + G+ ++ D + + + + WL + K+T++ A VT
Sbjct: 170 EQAINKYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVT 229
Query: 197 WSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGR 256
NWD + + +C I PPYF WINLK + +G + + G+ G
Sbjct: 230 CGNWDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGS 289
Query: 257 AHCGLDDAKNTARLLALLMHRGFKFSIT 284
H G+DD KN R++ ++ G +T
Sbjct: 290 HHLGIDDTKNITRVVQRMLSEGAVLKLT 317
>WB|WBGene00000797 [details] [associations]
symbol:crn-4 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0006309 "apoptotic DNA fragmentation"
evidence=IGI;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0000737
"DNA catabolic process, endonucleolytic" evidence=IDA] [GO:0000738
"DNA catabolic process, exonucleolytic" evidence=IDA] [GO:0006401
"RNA catabolic process" evidence=IDA] [GO:0004536
"deoxyribonuclease activity" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005622
GO:GO:0006401 GO:GO:0003697 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006309 GO:GO:0004540 GO:GO:0008408 GO:GO:0004520
EMBL:AY303578 EMBL:FO080097 PIR:T30086 RefSeq:NP_508415.1
UniGene:Cel.11543 PDB:3CG7 PDB:3CM5 PDB:3CM6 PDBsum:3CG7
PDBsum:3CM5 PDBsum:3CM6 ProteinModelPortal:Q10905 SMR:Q10905
STRING:Q10905 PaxDb:Q10905 EnsemblMetazoa:AH9.2 GeneID:180536
KEGG:cel:CELE_AH9.2 UCSC:AH9.2 CTD:180536 WormBase:AH9.2
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000016569
InParanoid:Q10905 OMA:DLWRIAQ EvolutionaryTrace:Q10905
NextBio:909784 GO:GO:0000738 Uniprot:Q10905
Length = 298
Score = 218 (81.8 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 59/202 (29%), Positives = 95/202 (47%)
Query: 96 FQYFVVIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDF 153
F +++DFE T D YP E+I+F V ++ + F YV+P N+ L+
Sbjct: 8 FDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKN 67
Query: 154 CKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFK 213
C D TGI Q +D T + +WL G++ FA V S D + + + +
Sbjct: 68 CVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLS 127
Query: 214 KIWKPPYFNRWINL-KVPFHEV--FG----GVRCNLKEAVEMAGLAWQGRAHCGLDDAKN 266
I P +F ++INL K+ +E+ G N+ + E L GRAH +DD N
Sbjct: 128 NIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCLN 187
Query: 267 TARLLALLMHRGFKFSITNSLM 288
A +L +++ G K ++ N L+
Sbjct: 188 IATILQRMINMGAKVTV-NELL 208
>POMBASE|SPBC30B4.08 [details] [associations]
symbol:eri1 "double-strand siRNA ribonuclease Eri1"
species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0032296 "double-stranded RNA-specific ribonuclease activity"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060906 "negative regulation of chromatin silencing by small
RNA" evidence=IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 PROSITE:PS50800 SMART:SM00479 Pfam:PF00929
PomBase:SPBC30B4.08 GO:GO:0005829 GO:GO:0046872 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0000175 eggNOG:COG5018
EMBL:AB004539 GO:GO:0000467 RefSeq:XP_001713129.1
ProteinModelPortal:Q08I43 EnsemblFungi:SPBC30B4.08.1 GeneID:2540347
KEGG:spo:SPBC30B4.08 OMA:HETIELP OrthoDB:EOG45MRFR NextBio:20801475
GO:GO:0032296 GO:GO:0060906 Uniprot:Q08I43
Length = 313
Score = 163 (62.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 83 WSTFYPDSQKPQEFQYFVVIDFEATCDKDKN-PYPQEIIEFPSVIVSSVTGQLEACFQTY 141
+ F ++ +Y +++D EATC++ + EIIE P ++ + + F +Y
Sbjct: 66 YQKFSTSNENKTCLRYLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSY 125
Query: 142 VRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEAL 175
VRP+ N LSD+CK LTGIQQ VD+ S+ L
Sbjct: 126 VRPSMNPTLSDYCKSLTGIQQCTVDKAPIFSDVL 159
Score = 106 (42.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 29/121 (23%), Positives = 57/121 (47%)
Query: 191 NFAVVTWSNWDCRVMLESECRFKKIWKPPYFNR-WINLKVPFHEVFGGVRCNLKEAVEMA 249
N+A WD L + ++ K+ P + +++++ + +V+ R N+ +E
Sbjct: 196 NWAWACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHW 255
Query: 250 GLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSLMWQTNDGSLTWNQFPERIFLPP 309
GL ++G H G+DDA+N +R++ + +F M +G W P R + PP
Sbjct: 256 GLQFEGSEHRGIDDARNLSRIVKKMCSENVEFECNRWWMEYEKNG---W--IPNRSY-PP 309
Query: 310 H 310
+
Sbjct: 310 Y 310
>UNIPROTKB|I3L645 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:FP016068
Ensembl:ENSSSCT00000025016 OMA:NDGKCHW Uniprot:I3L645
Length = 110
Score = 200 (75.5 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 40/75 (53%), Positives = 57/75 (76%)
Query: 90 SQKPQEFQYFVVIDFEATCDKD-KNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQ 148
S+ Q F Y VVIDFE+TC D K + QEIIEFP+V++++ TG++E+ F TYV+P +
Sbjct: 28 SKSKQLFDYLVVIDFESTCWNDGKCHWSQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHP 87
Query: 149 LLSDFCKDLTGIQQI 163
+LS+FC +LTGI+QI
Sbjct: 88 ILSEFCMELTGIKQI 102
>UNIPROTKB|Q81K63 [details] [associations]
symbol:kapD "Sporulation inhibitor KapD" species:1392
"Bacillus anthracis" [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=ISS] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
GO:GO:0030435 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 RefSeq:NP_847328.1 RefSeq:YP_021796.1
RefSeq:YP_031023.1 ProteinModelPortal:Q81K63 DNASU:1084512
EnsemblBacteria:EBBACT00000011210 EnsemblBacteria:EBBACT00000018196
EnsemblBacteria:EBBACT00000023106 GeneID:1084512 GeneID:2814688
GeneID:2847892 KEGG:ban:BA_5142 KEGG:bar:GBAA_5142 KEGG:bat:BAS4780
HOGENOM:HOG000098478 KO:K06348 OMA:FEFTMPE ProtClustDB:PRK07748
BioCyc:BANT260799:GJAJ-4858-MONOMER
BioCyc:BANT261594:GJ7F-5019-MONOMER Uniprot:Q81K63
Length = 207
Score = 194 (73.4 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 60/183 (32%), Positives = 93/183 (50%)
Query: 97 QYFVVIDFEATCDKD-KNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 152
Q F+ +DFE T + K P +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 153 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 212
CK GI+Q VD+G++ SE + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFSELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEK 114
Query: 213 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 271
+ P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 272 ALL 274
L+
Sbjct: 174 KLV 176
>TIGR_CMR|BA_5142 [details] [associations]
symbol:BA_5142 "sporulation inhibitor KapD" species:198094
"Bacillus anthracis str. Ames" [GO:0004527 "exonuclease activity"
evidence=ISS] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0030435 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 RefSeq:NP_847328.1
RefSeq:YP_021796.1 RefSeq:YP_031023.1 ProteinModelPortal:Q81K63
DNASU:1084512 EnsemblBacteria:EBBACT00000011210
EnsemblBacteria:EBBACT00000018196 EnsemblBacteria:EBBACT00000023106
GeneID:1084512 GeneID:2814688 GeneID:2847892 KEGG:ban:BA_5142
KEGG:bar:GBAA_5142 KEGG:bat:BAS4780 HOGENOM:HOG000098478 KO:K06348
OMA:FEFTMPE ProtClustDB:PRK07748
BioCyc:BANT260799:GJAJ-4858-MONOMER
BioCyc:BANT261594:GJ7F-5019-MONOMER Uniprot:Q81K63
Length = 207
Score = 194 (73.4 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 60/183 (32%), Positives = 93/183 (50%)
Query: 97 QYFVVIDFEATCDKD-KNP---YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 152
Q F+ +DFE T + K P +P EIIE +VS V ++E + +VRP L+D
Sbjct: 4 QRFLFLDFEFTMPQHRKKPKGFFP-EIIEVG--LVSVVGCKVEDTYSAHVRPKTFPSLTD 60
Query: 153 FCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRF 212
CK GI+Q VD+G++ SE + +K E + K +VTW N D +V L+ C
Sbjct: 61 RCKKFLGIKQEVVDKGISFSELV---EKLAEYE--KRCKPTIVTWGNMDMKV-LKHNCEK 114
Query: 213 KKIWKPPYFNRWINLKVPFHEVFGGV-RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 271
+ P+ + +L + + + FG + L +A+E G G+ HC LDDA T +
Sbjct: 115 AGV-DFPFLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIF 173
Query: 272 ALL 274
L+
Sbjct: 174 KLV 176
>UNIPROTKB|Q9KS82 [details] [associations]
symbol:VC1377 "Putative uncharacterized protein VC1377"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 Pfam:PF00929
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AE004217 PIR:A82207 RefSeq:NP_231021.1
ProteinModelPortal:Q9KS82 DNASU:2614831 GeneID:2614831
KEGG:vch:VC1377 PATRIC:20081824 OMA:DAWNIAA ProtClustDB:CLSK874348
Uniprot:Q9KS82
Length = 176
Score = 153 (58.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 100 VVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 158
V D E C + EIIE + G++ Q +V+P +++ S FC +LT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELT 65
Query: 159 GIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 217
GI ++++ G L+E + ++N G N +A +W D ++L +ECR K +
Sbjct: 66 GITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSV 118
Query: 218 PPYFNRWINLKVPF---HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 274
P F ++NL + H + R + A E G+ W+GR H G DA N A+L AL
Sbjct: 119 P--FQEFLNLATLYRIQHRL-KDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL-ALT 174
Query: 275 M 275
M
Sbjct: 175 M 175
>TIGR_CMR|VC_1377 [details] [associations]
symbol:VC_1377 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR012337
Pfam:PF00929 GenomeReviews:AE003852_GR GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AE004217 PIR:A82207
RefSeq:NP_231021.1 ProteinModelPortal:Q9KS82 DNASU:2614831
GeneID:2614831 KEGG:vch:VC1377 PATRIC:20081824 OMA:DAWNIAA
ProtClustDB:CLSK874348 Uniprot:Q9KS82
Length = 176
Score = 153 (58.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 100 VVIDFEATCDKDKNPYPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLT 158
V D E C + EIIE + G++ Q +V+P +++ S FC +LT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELT 65
Query: 159 GIQQIQVDR-GVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWK 217
GI ++++ G L+E + ++N G N +A +W D ++L +ECR K +
Sbjct: 66 GITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSV 118
Query: 218 PPYFNRWINLKVPF---HEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALL 274
P F ++NL + H + R + A E G+ W+GR H G DA N A+L AL
Sbjct: 119 P--FQEFLNLATLYRIQHRL-KDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL-ALT 174
Query: 275 M 275
M
Sbjct: 175 M 175
>TIGR_CMR|BA_3593 [details] [associations]
symbol:BA_3593 "exonuclease family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0006308 "DNA catabolic process"
evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0016797 "exonuclease activity, active with either ribo- or
deoxyribonucleic acids and producing 3'-phosphomonoesters"
evidence=ISS] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
RefSeq:NP_845863.2 ProteinModelPortal:Q81YF6 DNASU:1086387
EnsemblBacteria:EBBACT00000012965 GeneID:1086387 KEGG:ban:BA_3593
PATRIC:18784782 HOGENOM:HOG000095015 ProtClustDB:PRK06722
Uniprot:Q81YF6
Length = 273
Score = 122 (48.0 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 101 VIDFEATCDKDKNPYPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGI 160
+ D E K+ P EI++ +V + + T ++ F V+P L+ LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 161 QQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPY 220
+ + GV ++ +K++ G +++ F VTW D R L +C + P
Sbjct: 59 TKKDLI-GVEKFPQII--EKFIRFIG-EDSIF--VTWGKEDYR-FLSHDCTLHSVECPCM 111
Query: 221 FN-RWINLKV----PFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 271
R I+L+ + E+F +L+ AVE GL W+G+ H L DA+NTA +L
Sbjct: 112 EKERRIDLQKFVFQAYEELFEHTP-SLQSAVEQLGLIWEGKQHRALADAENTANIL 166
Score = 45 (20.9 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 288 MWQTNDGSLTWNQFPERIFL 307
+W T + S TW ER ++
Sbjct: 218 VWSTFESSDTWESITERYYI 237
>UNIPROTKB|G4MV21 [details] [associations]
symbol:MGG_07327 "Asparagine-rich protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 Pfam:PF00929 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CM001232 RefSeq:XP_003715562.1
EnsemblFungi:MGG_07327T0 GeneID:2683223 KEGG:mgr:MGG_07327
Uniprot:G4MV21
Length = 629
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 91 QKPQEFQYFVVIDFEATCDKDKNPY----PQEIIEFPSVIVSSVTGQLEACFQTYVRPTC 146
Q P +VV+ TCD + Y E+IE +++ + T + V+P
Sbjct: 8 QTPLSVDRYVVLHAATTCD-EHGVYVTKDSAEVIELGWILLDAKTLEELHHESVLVKPV- 65
Query: 147 NQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWL-ENKGIKNTNFAVVTWSNWDCRVM 205
N ++ C LT + V T +A+ R D + E+ +N +F VT+ WD RV
Sbjct: 66 NTPITPLCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVTFEAWDLRVQ 125
Query: 206 LESECRFKKIWKPPYF--NRWINLKVPF 231
L E R K + PPY +R +L+ +
Sbjct: 126 LPREARDKSVVLPPYLQHSRTFDLRTEY 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 375 375 0.00088 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 629 (67 KB)
Total size of DFA: 321 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.94u 0.09s 30.03t Elapsed: 00:00:02
Total cpu time: 29.94u 0.09s 30.03t Elapsed: 00:00:03
Start: Tue May 21 05:18:58 2013 End: Tue May 21 05:19:01 2013