Query 017213
Match_columns 375
No_of_seqs 122 out of 227
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 10:47:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1upk_A MO25 protein; transfera 100.0 2E-129 9E-134 952.0 31.9 333 1-373 3-337 (341)
2 4hxt_A De novo protein OR329; 97.0 0.057 1.9E-06 45.9 17.5 183 72-266 37-222 (252)
3 4db8_A Armadillo-repeat protei 96.5 0.042 1.5E-06 47.4 12.8 182 73-266 48-232 (252)
4 4hxt_A De novo protein OR329; 96.5 0.26 9E-06 41.7 17.2 236 80-368 3-241 (252)
5 1wa5_B Importin alpha subunit; 95.4 0.5 1.7E-05 46.0 15.9 179 76-266 212-393 (530)
6 2jdq_A Importin alpha-1 subuni 95.2 1.4 4.9E-05 40.7 17.8 178 76-266 146-328 (450)
7 4db6_A Armadillo repeat protei 95.2 0.31 1.1E-05 40.9 12.1 173 81-266 14-190 (210)
8 4db6_A Armadillo repeat protei 95.0 0.59 2E-05 39.1 13.3 159 72-239 47-208 (210)
9 1xqr_A HSPBP1 protein; armadil 94.4 3.3 0.00011 38.9 21.4 208 14-241 25-239 (296)
10 4fdd_A Transportin-1; heat rep 94.0 4.5 0.00016 41.8 19.8 167 82-266 93-266 (852)
11 4db8_A Armadillo-repeat protei 93.4 3 0.0001 35.7 14.8 156 75-239 92-250 (252)
12 4b8j_A Importin subunit alpha- 93.0 5.7 0.00019 38.3 17.6 185 73-266 280-477 (528)
13 1wa5_B Importin alpha subunit; 92.2 3 0.0001 40.5 14.6 162 74-244 294-461 (530)
14 4b8j_A Importin subunit alpha- 91.8 3.9 0.00013 39.5 14.7 178 76-266 199-381 (528)
15 3tpo_A Importin subunit alpha- 90.4 2.6 8.9E-05 41.5 12.2 182 73-266 156-345 (529)
16 2jdq_A Importin alpha-1 subuni 89.8 4.9 0.00017 37.1 12.9 180 75-266 103-286 (450)
17 2bpt_A Importin beta-1 subunit 89.4 9.3 0.00032 38.5 15.5 113 124-241 132-254 (861)
18 2z6g_A B-catenin; FULL-length, 85.4 39 0.0013 35.4 18.6 177 78-266 149-328 (780)
19 4fdd_A Transportin-1; heat rep 85.0 4.5 0.00016 41.8 10.5 172 82-266 51-225 (852)
20 1jdh_A Beta-catenin; beta-cate 84.0 23 0.00079 33.4 14.1 175 77-266 141-318 (529)
21 3tpo_A Importin subunit alpha- 83.4 36 0.0012 33.3 17.6 157 74-239 288-448 (529)
22 1ibr_B P95, importin beta-1 su 82.1 31 0.001 31.7 15.4 113 124-242 126-248 (462)
23 3ul1_B Importin subunit alpha- 82.1 39 0.0013 33.0 15.5 157 74-239 269-429 (510)
24 3now_A UNC-45 protein, SD10334 82.1 57 0.0019 35.3 17.8 199 72-320 488-694 (810)
25 3ul1_B Importin subunit alpha- 81.1 24 0.00081 34.6 13.5 180 75-266 181-368 (510)
26 3nmw_A APC variant protein; AR 80.5 19 0.00066 34.4 12.4 164 75-246 166-340 (354)
27 4hat_C Exportin-1; heat repeat 80.4 21 0.00073 39.2 14.0 81 136-216 816-905 (1023)
28 2qk2_A LP04448P; mini spindles 79.3 30 0.001 29.9 12.9 160 84-266 20-186 (242)
29 1xqr_A HSPBP1 protein; armadil 78.0 10 0.00035 35.5 9.4 105 155-266 114-219 (296)
30 2z6h_A Catenin beta-1, beta-ca 78.0 59 0.002 32.5 16.7 159 75-243 348-530 (644)
31 3nmz_A APC variant protein; pr 77.2 40 0.0014 33.6 13.9 161 75-243 282-453 (458)
32 1u6g_C TIP120 protein, CAND1; 75.5 17 0.00058 39.2 11.3 148 80-242 49-206 (1230)
33 1jdh_A Beta-catenin; beta-cate 75.3 55 0.0019 30.8 17.2 155 77-240 15-172 (529)
34 3qml_C Protein SLS1, nucleotid 74.3 12 0.00041 36.7 8.9 58 69-134 63-122 (315)
35 1qgr_A Protein (importin beta 74.3 76 0.0026 31.9 15.4 152 79-240 128-288 (876)
36 2z6g_A B-catenin; FULL-length, 72.4 70 0.0024 33.4 14.8 160 74-243 483-666 (780)
37 3now_A UNC-45 protein, SD10334 71.5 50 0.0017 35.7 13.8 184 72-266 529-718 (810)
38 1qgr_A Protein (importin beta 71.4 89 0.003 31.4 19.2 114 124-242 126-248 (876)
39 2z6h_A Catenin beta-1, beta-ca 71.1 88 0.003 31.3 17.6 156 76-240 11-169 (644)
40 2qk2_A LP04448P; mini spindles 69.8 39 0.0013 29.2 10.5 156 83-257 60-221 (242)
41 1upk_A MO25 protein; transfera 69.5 67 0.0023 31.7 13.0 138 71-211 156-302 (341)
42 2vgl_B AP-2 complex subunit be 65.6 63 0.0022 32.3 12.3 137 80-243 50-192 (591)
43 3grl_A General vesicular trans 65.1 1.5E+02 0.0051 31.6 16.6 158 47-207 82-254 (651)
44 1ibr_B P95, importin beta-1 su 59.4 74 0.0025 29.1 10.7 94 138-239 104-202 (462)
45 1b3u_A Protein (protein phosph 58.4 95 0.0032 29.4 11.5 142 168-369 444-585 (588)
46 2vgl_A Adaptor protein complex 58.3 1.1E+02 0.0038 31.2 12.8 196 17-242 11-218 (621)
47 2bpt_A Importin beta-1 subunit 57.9 1.6E+02 0.0054 29.6 18.1 158 80-252 225-409 (861)
48 2x19_B Importin-13; nuclear tr 53.0 2.1E+02 0.0073 29.6 18.1 124 125-253 725-859 (963)
49 3gjx_A Exportin-1; transport, 50.9 97 0.0033 34.5 11.6 79 136-216 842-929 (1073)
50 3ltm_A Alpha-REP4; protein eng 50.4 1.1E+02 0.0037 25.4 14.9 135 79-266 50-184 (211)
51 1wa5_C Importin alpha RE-expor 47.9 2.7E+02 0.0093 29.3 16.0 102 90-196 48-154 (960)
52 3eg5_B Protein diaphanous homo 45.5 1.9E+02 0.0066 28.0 11.7 136 8-191 64-211 (383)
53 1w63_A Adapter-related protein 45.4 2.5E+02 0.0087 28.2 15.1 42 173-215 187-228 (618)
54 3m1i_C Exportin-1; heat repeat 43.8 3.3E+02 0.011 29.1 14.8 98 136-239 816-924 (1049)
55 2qk1_A Protein STU2; STU2P, XM 41.5 1.3E+02 0.0046 26.8 9.2 165 89-266 26-201 (249)
56 1xm9_A Plakophilin 1; armadill 41.4 1.3E+02 0.0043 29.1 9.6 116 125-246 5-122 (457)
57 1w9c_A CRM1 protein, exportin 39.6 2.7E+02 0.0093 27.0 15.9 92 125-216 114-221 (321)
58 3grl_A General vesicular trans 37.0 58 0.002 34.7 6.8 48 218-266 129-176 (651)
59 2bnx_A Diaphanous protein homo 33.8 3.4E+02 0.012 26.3 11.4 177 8-215 2-211 (386)
60 3ltj_A Alpharep-4; protein eng 33.6 2E+02 0.0067 23.5 12.6 69 169-266 80-148 (201)
61 1w63_A Adapter-related protein 32.4 3.7E+02 0.013 27.0 11.7 66 169-244 317-382 (618)
62 2x19_B Importin-13; nuclear tr 31.6 2.3E+02 0.0078 29.4 10.2 125 137-275 786-918 (963)
63 3opb_A SWI5-dependent HO expre 30.8 1.8E+02 0.0061 31.6 9.4 235 74-356 493-766 (778)
64 2jqq_A Conserved oligomeric go 26.1 2.6E+02 0.0088 25.9 8.3 78 13-92 75-154 (204)
65 3r1f_A ESX-1 secretion-associa 24.8 83 0.0029 26.2 4.5 97 8-108 25-129 (135)
66 3ltj_A Alpharep-4; protein eng 24.1 2.9E+02 0.0099 22.4 13.7 71 167-266 109-179 (201)
67 2vgl_A Adaptor protein complex 22.1 6.3E+02 0.022 25.6 11.5 69 169-245 333-402 (621)
68 1vdy_A Hypothetical protein (R 21.5 2.3E+02 0.0078 24.4 6.7 92 58-152 22-121 (140)
69 2qfa_B Borealin; three-helical 20.7 19 0.00066 27.5 -0.2 34 336-369 4-39 (62)
70 3ci9_A Heat shock factor-bindi 20.4 92 0.0031 22.6 3.4 20 9-28 1-20 (48)
71 2yru_A Steroid receptor RNA ac 20.0 97 0.0033 25.9 4.0 42 40-81 37-78 (118)
No 1
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=100.00 E-value=2.5e-129 Score=951.96 Aligned_cols=333 Identities=44% Similarity=0.773 Sum_probs=308.2
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHhhccCCchhhhhHHH-HHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhc
Q 017213 1 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDK-MAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFREN 79 (375)
Q Consensus 1 M~flFkkk~KtP~ElVr~l~e~l~~L~~~~~~~~~K~e~k-~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d 79 (375)
|+ ||++||||+|+||+++|+|.+|+.++ ++.+.++| .+||+|+|++||.||||++|++|+||+|+|||+|+|++|
T Consensus 3 m~--F~~~~ktP~elVr~l~d~l~~l~~~~--~~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~d 78 (341)
T 1upk_A 3 FP--FGKSHKSPADIVKNLKESMAVLEKQD--ISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSG 78 (341)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHC-----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHS
T ss_pred CC--CCCCCCCHHHHHHHHHHHHHHHhccc--cccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 56 99999999999999999999999643 23344333 489999999999999999999999999999999999999
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhHhHHHHHHHHHHHHHHHH
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVAR 159 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~mLRecir~e~la~ 159 (375)
+|++||.|||+||||+|||+++||++++|+++++++|+|+||++||||+++|+.||+++|+|++||.|||||||||.+|+
T Consensus 79 ll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la~ 158 (341)
T 1upk_A 79 LLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAK 158 (341)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHh
Q 017213 160 YVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDIL 239 (375)
Q Consensus 160 ~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelL 239 (375)
+||+|++||+||+|+++|+||||||||+||||+||+||++||+||++||||||++|| +||+|+||||||||||||||||
T Consensus 159 ~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~-~Ll~S~NYVTkRQSlKLLgelL 237 (341)
T 1upk_A 159 IILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELL 237 (341)
T ss_dssp HHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHH-HHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHH-HHhcCCcchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred ccccchHHHHHhhcChhhHHHHHHHhhhhccCCcchhHHHHHHHhhhcCCCcccccccccccCCCcccchhhheeeeeee
Q 017213 240 LDRSNSVVMTRYVSSRENLRILMNLLRVRYFPRMHVEDIFYLAYQKLQGTEPVTFDKISLHMESSKSIQIEAFHVFKLFA 319 (375)
Q Consensus 240 ldr~N~~vM~rYis~~~NLkl~M~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~Iq~EAFhvFKvFv 319 (375)
+||+|++||++||+|++|||+||+||| |+||+||+||||||||||
T Consensus 238 ldr~N~~vM~~Yis~~~nLkl~M~LL~-----------------------------------d~sk~Iq~EAFhVFKvFV 282 (341)
T 1upk_A 238 LDRHNFTIMTKYISKPENLKLMMNLLR-----------------------------------DKSRNIQFEAFHVFKVFV 282 (341)
T ss_dssp HSGGGHHHHHHHTTCHHHHHHHHHHTT-----------------------------------CSCHHHHHHHHHHHHHHH
T ss_pred hCchHHHHHHHHhCCHHHHHHHHHHhc-----------------------------------Cchhchhhhhhhheeeee
Confidence 999999999999999999999999999 999999999999999999
Q ss_pred ecCCCChhHHHHHHHhHHHHHHHHhhCCCCC-cccchHHHHHHHHHHHhcCCCCC
Q 017213 320 ANQNKPPDIVSILVANRSKLLRLFADFKTDK-EDEQFEADKAQVVKEIAGLEPRD 373 (375)
Q Consensus 320 ANp~K~~~I~~IL~~Nr~kLl~fl~~f~~d~-~DeqF~~EK~~lI~~I~~L~~~~ 373 (375)
||||||++|++||.+||+|||+||.+|++|+ +|+||+|||++||++|++||+..
T Consensus 283 ANP~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~eDeqF~dEK~~lI~~I~~L~~~~ 337 (341)
T 1upk_A 283 ANPNKTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPA 337 (341)
T ss_dssp HCSSCCHHHHHHHHHTHHHHHHHHHHTTTTC-CCSHHHHHHHHHHHHHHTCCCCC
T ss_pred eCCCCChHHHHHHHHHHHHHHHHHHhCCCCCcchhhHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999 99999999999999999998653
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.05 E-value=0.057 Score=45.89 Aligned_cols=183 Identities=12% Similarity=0.209 Sum_probs=134.2
Q ss_pred HHHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHH
Q 017213 72 TAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLR 149 (375)
Q Consensus 72 a~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLR 149 (375)
...+...+.+..|+..|..=+-+.|..+..+..++..... ...+.+. ....+..|+.-. +++++...+-..|.
T Consensus 37 ~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~----~~~~~~~-~~~~i~~l~~ll~~~~~~v~~~a~~~L~ 111 (252)
T 4hxt_A 37 IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD----EAIKAIV-DAGGVEVLVKLLTSTDSEVQKEAARALA 111 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH----HHHHHHH-HTTHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCh----HHHHHHH-HCCCHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3455667889999999988888889999998888876321 1223332 223444444333 35677777777888
Q ss_pred HHH-HHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchh
Q 017213 150 ECI-RHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITR 228 (375)
Q Consensus 150 eci-r~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTk 228 (375)
.+. ..+.....+.+...+..+.+.+..++-++...|..++..+...++.....+...+ .....- .++.+++--++
T Consensus 112 ~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~---~i~~L~-~ll~~~~~~v~ 187 (252)
T 4hxt_A 112 NIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAG---GVEVLV-KLLTSTDSEVQ 187 (252)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-HHTTCSCHHHH
T ss_pred HHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCc---CHHHHH-HHHCCCCHHHH
Confidence 877 5677888888888889999999999999999999999998777766655555543 344553 78999999999
Q ss_pred hhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 229 RQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 229 RQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
+.++..|+.+... +.. ..+.+.+..-+..++.+|+
T Consensus 188 ~~a~~~L~~l~~~--~~~-~~~~l~~~~~i~~L~~ll~ 222 (252)
T 4hxt_A 188 KEAARALANIASG--PTS-AIKAIVDAGGVEVLQKLLT 222 (252)
T ss_dssp HHHHHHHHHHTTS--BHH-HHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHcC--CHH-HHHHHHHCCCHHHHHHHHC
Confidence 9999999999862 222 3344556678888888988
No 3
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.52 E-value=0.042 Score=47.39 Aligned_cols=182 Identities=14% Similarity=0.129 Sum_probs=128.5
Q ss_pred HHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHH
Q 017213 73 AEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLRE 150 (375)
Q Consensus 73 ~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLRe 150 (375)
..+...+.+..|+..|..=+-+.|..+..+..++...... ..+.+.. ...+..|+.-- +++++--.+-..|..
T Consensus 48 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~ 122 (252)
T 4db8_A 48 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSN 122 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3566778999999999888888898888888888753221 1223322 23444444433 355666667777777
Q ss_pred HHHHHHHH-HHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhh
Q 017213 151 CIRHQSVA-RYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRR 229 (375)
Q Consensus 151 cir~e~la-~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkR 229 (375)
+..++... ..+.....+..+.+.++.++-++...|..++..+....+.........+ .....- .++.+++--++.
T Consensus 123 l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~i~~L~-~ll~~~~~~v~~ 198 (252)
T 4db8_A 123 IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAG---ALPALV-QLLSSPNEQILQ 198 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---CHHHHH-HGGGCSSHHHHH
T ss_pred hhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCC---CHHHHH-HHHCCCCHHHHH
Confidence 77776666 7788888888899999999999999999999998876665555555433 344443 788899999999
Q ss_pred hhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 230 QAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 230 QslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
.++..|+.+... +... ...+-+..-+..++.+|+
T Consensus 199 ~a~~~L~~l~~~--~~~~-~~~~~~~g~i~~L~~ll~ 232 (252)
T 4db8_A 199 EALWALSNIASG--GNEQ-KQAVKEAGALEKLEQLQS 232 (252)
T ss_dssp HHHHHHHHHTTS--CHHH-HHHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHHhcC--CHHH-HHHHHHCCcHHHHHHHhC
Confidence 999999999832 2222 223335567788888888
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.46 E-value=0.26 Score=41.74 Aligned_cols=236 Identities=13% Similarity=0.230 Sum_probs=160.3
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHHHHHH-HH
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLRECIRH-QS 156 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLRecir~-e~ 156 (375)
.+..|+..|..=+-+.|..+.....++..... ...+.+.. ..++..|+.-- +++++-..+-..|..+..+ +.
T Consensus 3 ~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~----~~~~~~~~-~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 77 (252)
T 4hxt_A 3 DVEKLVKLLTSTDSETQKEAARDLAEIASGPA----SAIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 77 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH----HHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc----HHHHHHHH-CCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH
Confidence 46677888877788888888888888876442 12233322 23444444433 3466777777778887777 88
Q ss_pred HHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHH
Q 017213 157 VARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLG 236 (375)
Q Consensus 157 la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLg 236 (375)
....+.....+..+...++.++-++...|..++..+-..++......+..+ .....- +++.+++--+++.++..|+
T Consensus 78 ~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~i~~L~-~~l~~~~~~~~~~a~~~L~ 153 (252)
T 4hxt_A 78 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAG---GVEVLV-KLLTSTDSEVQKEAARALA 153 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-HHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC---CHHHHH-HHHcCCCHHHHHHHHHHHH
Confidence 888888888889999999999999999999999999877777666666643 344553 7899999999999999999
Q ss_pred HHhccccchHHHHHhhcChhhHHHHHHHhhhhccCCcchhHHHHHHHhhhcCCCcccccccccccCCCcccchhhheeee
Q 017213 237 DILLDRSNSVVMTRYVSSRENLRILMNLLRVRYFPRMHVEDIFYLAYQKLQGTEPVTFDKISLHMESSKSIQIEAFHVFK 316 (375)
Q Consensus 237 elLldr~N~~vM~rYis~~~NLkl~M~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~Iq~EAFhvFK 316 (375)
.+..+..+ ..+.+-+..-+..++.+|+ +.+..++..|...+-
T Consensus 154 ~l~~~~~~---~~~~~~~~~~i~~L~~ll~-----------------------------------~~~~~v~~~a~~~L~ 195 (252)
T 4hxt_A 154 NIASGPDE---AIKAIVDAGGVEVLVKLLT-----------------------------------STDSEVQKEAARALA 195 (252)
T ss_dssp HHTTSCHH---HHHHHHHTTHHHHHHHHTT-----------------------------------CSCHHHHHHHHHHHH
T ss_pred HHHcCCHH---HHHHHHHCcCHHHHHHHHC-----------------------------------CCCHHHHHHHHHHHH
Confidence 99864332 2234445778899999999 888889999888877
Q ss_pred eeeecCCCChhHHHHHHHhHHHHHHHHhhCCCCCcccchHHHHHHHHHHHhc
Q 017213 317 LFAANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAG 368 (375)
Q Consensus 317 vFvANp~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~DeqF~~EK~~lI~~I~~ 368 (375)
-+.+ .++.....+... ..+..+-+...+ .|.....+=...+..|..
T Consensus 196 ~l~~---~~~~~~~~l~~~--~~i~~L~~ll~~-~~~~v~~~a~~~L~~l~~ 241 (252)
T 4hxt_A 196 NIAS---GPTSAIKAIVDA--GGVEVLQKLLTS-TDSEVQKEAQRALENIKS 241 (252)
T ss_dssp HHTT---SBHHHHHHHHHT--THHHHHHHGGGC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHc---CCHHHHHHHHHC--CCHHHHHHHHCC-CcHHHHHHHHHHHHHHHc
Confidence 6665 234444444432 234444444333 233333444444444443
No 5
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=95.37 E-value=0.5 Score=45.98 Aligned_cols=179 Identities=13% Similarity=0.119 Sum_probs=123.6
Q ss_pred HhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHHHHH
Q 017213 76 FRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLRECIR 153 (375)
Q Consensus 76 ~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLRecir 153 (375)
...+.+..|+..+..-+-+.|+.+...+.++.+..... +..... ..++..|+.-- +++++-..+-..|..+..
T Consensus 212 ~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~--~~~~~~---~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~ 286 (530)
T 1wa5_B 212 LQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQ--PDWSVV---SQALPTLAKLIYSMDTETLVDACWAISYLSD 286 (530)
T ss_dssp HHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSC--CCHHHH---GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHS
T ss_pred HHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCC--CcHHHH---HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 34567888888888878889999999999998754111 111222 22333333322 345555555566666554
Q ss_pred H-HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhH
Q 017213 154 H-QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAV 232 (375)
Q Consensus 154 ~-e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQsl 232 (375)
. +.....++....+..+...+..++-++...|..++..+.+.+......++..+ +....- .+|.+++.-+|..++
T Consensus 287 ~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~l~~L~-~lL~~~~~~vr~~A~ 362 (530)
T 1wa5_B 287 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAG---VLPALR-LLLSSPKENIKKEAC 362 (530)
T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-HHTTCSCHHHHHHHH
T ss_pred CCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcc---hHHHHH-HHHcCCCHHHHHHHH
Confidence 3 44566677777888888899889999999999999998887776666666544 444553 789999999999999
Q ss_pred HHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 233 KLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 233 KLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
..|+.|.. .+...+..++ +..-+..++.+|.
T Consensus 363 ~aL~~l~~--~~~~~~~~~~-~~~~l~~L~~lL~ 393 (530)
T 1wa5_B 363 WTISNITA--GNTEQIQAVI-DANLIPPLVKLLE 393 (530)
T ss_dssp HHHHHHTT--SCHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHc--CCHHHHHHHH-HCCCHHHHHHHHh
Confidence 99999874 3334333333 5567888888888
No 6
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=95.19 E-value=1.4 Score=40.69 Aligned_cols=178 Identities=15% Similarity=0.176 Sum_probs=121.6
Q ss_pred HhhchHHHHHHhCCC-CChhhhhhHHHHHHHHhhhc-ccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHHH
Q 017213 76 FRENTLRLLITCLPK-LNLEARKDATQVVANLQRQQ-VHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLREC 151 (375)
Q Consensus 76 ~~~d~l~~Li~~l~~-L~fE~RKd~~~If~~llr~~-~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLRec 151 (375)
...+.+..|+..+.. -+-+.|+.+...+.++.+.. ...+ ...+ ..++..|+..- +++++...+...|+.+
T Consensus 146 ~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~---~~~~---~~~l~~L~~~l~~~~~~v~~~a~~~L~~l 219 (450)
T 2jdq_A 146 LDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPE---FAKV---SPCLNVLSWLLFVSDTDVLADACWALSYL 219 (450)
T ss_dssp HHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCC---GGGT---GGGHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCC---HHHH---HHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 445788899999985 78899999999999998744 1111 1222 33444444333 3445555556666666
Q ss_pred HHH-HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhh
Q 017213 152 IRH-QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQ 230 (375)
Q Consensus 152 ir~-e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQ 230 (375)
..+ +.....+...+.+..+.+.+..++-++...|..++..+.+.........+..+ .....- .++.+++--+|+.
T Consensus 220 ~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~l~~L~-~ll~~~~~~vr~~ 295 (450)
T 2jdq_A 220 SDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCS---ALQSLL-HLLSSPKESIKKE 295 (450)
T ss_dssp TSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTT---HHHHHH-HHTTCSSHHHHHH
T ss_pred HCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCc---cHHHHH-HHHcCCCHHHHHH
Confidence 654 34455666677888888999889999999999999998877665554444433 445553 7899999999999
Q ss_pred hHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 231 AVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 231 slKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
++..||.+.. .+...+...+ +..-+..++.+|+
T Consensus 296 a~~~L~~l~~--~~~~~~~~~~-~~~~l~~L~~~l~ 328 (450)
T 2jdq_A 296 ACWTISNITA--GNRAQIQTVI-DANIFPALISILQ 328 (450)
T ss_dssp HHHHHHHHTT--SCHHHHHHHH-HTTHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCHHHHHHHH-HCCCHHHHHHHHh
Confidence 9999999984 2333333333 3466777888888
No 7
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.17 E-value=0.31 Score=40.86 Aligned_cols=173 Identities=13% Similarity=0.126 Sum_probs=118.6
Q ss_pred HHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHHHH-HHHHH
Q 017213 81 LRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLRECI-RHQSV 157 (375)
Q Consensus 81 l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLReci-r~e~l 157 (375)
...|+.-|..=+-+.|..+.....++-+.... ..+.+.. ...+..|+..- +++++--.+-..|..+. ..+..
T Consensus 14 ~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 14 LPQMVQQLNSPDQQELQSALRKLSQIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 34455555566777888888888877643221 1222222 23333343332 24566666666777766 45666
Q ss_pred HHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHH
Q 017213 158 ARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGD 237 (375)
Q Consensus 158 a~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLge 237 (375)
...+.+...+..+.+.++.++-++...|..++..+....+......+..+ .+...- .++.+++.-+++.++..|+.
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~i~~L~-~ll~~~~~~v~~~a~~aL~~ 164 (210)
T 4db6_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAG---ALPALV-QLLSSPNEQILQEALWALSN 164 (210)
T ss_dssp HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-HHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcC---cHHHHH-HHHcCCCHHHHHHHHHHHHH
Confidence 67788888888999999999999999999999998877766665655543 444553 78999999999999999999
Q ss_pred Hhcc-ccchHHHHHhhcChhhHHHHHHHhh
Q 017213 238 ILLD-RSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 238 lLld-r~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
+... +.+. ..+.+..-+..+..+|.
T Consensus 165 l~~~~~~~~----~~~~~~g~i~~L~~ll~ 190 (210)
T 4db6_A 165 IASGGNEQK----QAVKEAGALEKLEQLQS 190 (210)
T ss_dssp HHTSCHHHH----HHHHHTTHHHHHHHGGG
T ss_pred HHcCCcHHH----HHHHHCCCHHHHHHHHh
Confidence 9975 3222 34445567888888888
No 8
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=94.97 E-value=0.59 Score=39.09 Aligned_cols=159 Identities=12% Similarity=0.117 Sum_probs=113.7
Q ss_pred HHHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc--CchhhHhHHHHHH
Q 017213 72 TAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE--NTDMALHYGAMLR 149 (375)
Q Consensus 72 a~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe--~~dial~~G~mLR 149 (375)
...+...+.+..|+..|..=+-+.|..+.....++...... ..+.+. ....+..|+.--. ++++--.+-..|.
T Consensus 47 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~ 121 (210)
T 4db6_A 47 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVI-DAGALPALVQLLSSPNEQILQEALWALS 121 (210)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHH-HTTCHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH----HHHHHH-HCCCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 34566778899999999888888999999999888753211 122222 2233333333333 4555555556666
Q ss_pred HHH-HHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchh
Q 017213 150 ECI-RHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITR 228 (375)
Q Consensus 150 eci-r~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTk 228 (375)
.+. ..+...+.+++...+..+.+.++.++-++...|..++..+...++.....+...+ .....- .|+.+++.-++
T Consensus 122 ~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g---~i~~L~-~ll~~~~~~v~ 197 (210)
T 4db6_A 122 NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAG---ALEKLE-QLQSHENEKIQ 197 (210)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT---HHHHHH-HGGGCSCHHHH
T ss_pred HHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC---CHHHHH-HHHhCCCHHHH
Confidence 655 3555666778888899999999999999999999999999887677666666554 444553 78999999999
Q ss_pred hhhHHHHHHHh
Q 017213 229 RQAVKLLGDIL 239 (375)
Q Consensus 229 RQslKLLgelL 239 (375)
++++..|+.+-
T Consensus 198 ~~a~~aL~~l~ 208 (210)
T 4db6_A 198 KEAQEALEKLQ 208 (210)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 9
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=94.44 E-value=3.3 Score=38.88 Aligned_cols=208 Identities=13% Similarity=0.099 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHhhccC-Cchhhhh-HHHHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhchHHHHHH-hCCC
Q 017213 14 DIVRQTRDLIIYANRSA-DVRESKR-EDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLIT-CLPK 90 (375)
Q Consensus 14 ElVr~l~e~l~~L~~~~-~~~~~K~-e~k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d~l~~Li~-~l~~ 90 (375)
+-++.+++++..|.++. ..+.... ..-.++-...+..+..++.+. .-+..+...+.+..|+. .|..
T Consensus 25 d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~-----------dna~~~~~~G~l~~Lv~~lL~s 93 (296)
T 1xqr_A 25 GEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENM-----------DNAADFCQLSGMHLLVGRYLEA 93 (296)
T ss_dssp HHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSH-----------HHHHHHHHTTHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhCh-----------hhHHHHHHcCCHHHHHHHHHcC
Confidence 44777788888887642 1111110 011233444455555555411 14556777888889999 9988
Q ss_pred CChhhhhhHHHHHHHHhhhcccCccchhHHhhh---chhHHHHHHHhccCchhhHhHHHHHHHHHH-HHHHHHHHhcchh
Q 017213 91 LNLEARKDATQVVANLQRQQVHSKLIASDYLEA---NIDLLDILIAGYENTDMALHYGAMLRECIR-HQSVARYVLESQH 166 (375)
Q Consensus 91 L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~---~~~il~~L~~gYe~~dial~~G~mLRecir-~e~la~~iL~s~~ 166 (375)
=+-+.|..++.+.+++...... .-+++.. -|-++..|-.+. ++.+.-.+-.-|.-+++ ++.....+.....
T Consensus 94 ~~~~vr~~Aa~~Lg~ia~~n~~----~~~~vv~~g~l~~Ll~LL~~~~-~~~v~~~A~~ALsnl~~~~~~~~~~~~~~gg 168 (296)
T 1xqr_A 94 GAAGLRWRAAQLIGTCSQNVAA----IQEQVLGLGALRKLLRLLDRDA-CDTVRVKALFAISCLVREQEAGLLQFLRLDG 168 (296)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHHCS-CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH
T ss_pred CCHHHHHHHHHHHHHHHhCCHH----HHHHHHHCCCHHHHHHHHccCC-CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCC
Confidence 8889999999999988753211 1233332 244444443322 23333333333333333 3444445555666
Q ss_pred hhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhcc
Q 017213 167 MKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLD 241 (375)
Q Consensus 167 ~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLld 241 (375)
+-.+...++.+++++-.+|...+..+...+......+...+. +...- .||.+++--++.+++..|+.|+.+
T Consensus 169 i~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~---i~~Lv-~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 169 FSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGM---VQQLV-ALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTH---HHHHH-HHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCC---HHHHH-HHHcCCChhHHHHHHHHHHHHHhC
Confidence 777777888899999999999999998887777777777653 44553 799999999999999999999976
No 10
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=93.96 E-value=4.5 Score=41.76 Aligned_cols=167 Identities=14% Similarity=0.147 Sum_probs=100.1
Q ss_pred HHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhHhHHHH--HHHHHH-HHHH-
Q 017213 82 RLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAM--LRECIR-HQSV- 157 (375)
Q Consensus 82 ~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~m--LRecir-~e~l- 157 (375)
..++..|..=+-..|+.++.+++.+.+.. +...-|+++..|+..-.+++.....|.+ |....+ ....
T Consensus 93 ~~ll~~l~~~~~~vr~~~a~~i~~ia~~~---------~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~ 163 (852)
T 4fdd_A 93 SECLNNIGDSSPLIRATVGILITTIASKG---------ELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEIL 163 (852)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHHHT---------TTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhc---------CccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHh
Confidence 34445555555566777777777776643 2234589999998888776654444433 111111 1111
Q ss_pred HHHHh---cchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHH
Q 017213 158 ARYVL---ESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKL 234 (375)
Q Consensus 158 a~~iL---~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKL 234 (375)
.+--+ -...+..++..++.++-+|-.-|..++..++..+.. -+..+.+.+....- +++.+++--.|+++++.
T Consensus 164 ~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~----~~~~~~~~~l~~l~-~~~~d~~~~vr~~a~~~ 238 (852)
T 4fdd_A 164 DSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ----ALMLHIDSFIENLF-ALAGDEEPEVRKNVCRA 238 (852)
T ss_dssp HHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCH----HHHTSHHHHHHHHH-HHHTCCCHHHHHHHHHH
T ss_pred chhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccH----HHHHHHHHHHHHHH-HHcCCCCHHHHHHHHHH
Confidence 00000 011344566677778888888888888776654432 23445566776664 78889999999999999
Q ss_pred HHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 235 LGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 235 LgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
|+.+... ....+..|+. .-+..++.+++
T Consensus 239 L~~l~~~--~~~~~~~~l~--~l~~~l~~~~~ 266 (852)
T 4fdd_A 239 LVMLLEV--RMDRLLPHMH--NIVEYMLQRTQ 266 (852)
T ss_dssp HHHHHHH--CHHHHGGGHH--HHHHHHHHHHT
T ss_pred HHHHHHh--CHHHHHHHHH--HHHHHHHHHcc
Confidence 9999853 3455555554 24445555555
No 11
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=93.40 E-value=3 Score=35.67 Aligned_cols=156 Identities=12% Similarity=0.116 Sum_probs=112.5
Q ss_pred HHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc--CchhhHhHHHHHHHHH
Q 017213 75 FFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE--NTDMALHYGAMLRECI 152 (375)
Q Consensus 75 ~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe--~~dial~~G~mLReci 152 (375)
+...+.+..|+..|..=+-+.|..+.....++-.... ...+.+. ....+..|+..-. ++++...+-..|..+.
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~----~~~~~~~-~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~ 166 (252)
T 4db8_A 92 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN----EQIQAVI-DAGALPALVQLLSSPNEQILQEALWALSNIA 166 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH----HHHHHHH-HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCc----hHHHHHH-HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3445688889998888788899999999988855221 1113333 2344555544433 4556666666666666
Q ss_pred H-HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhh
Q 017213 153 R-HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQA 231 (375)
Q Consensus 153 r-~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQs 231 (375)
. .+.....+.+...+..+.+.+..++-++...|..++..+...++.....++..+ .....- .++.+++.-+|+.+
T Consensus 167 ~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g---~i~~L~-~ll~~~~~~v~~~A 242 (252)
T 4db8_A 167 SGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAG---ALEKLE-QLQSHENEKIQKEA 242 (252)
T ss_dssp TSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-TTTTCSSSHHHHTH
T ss_pred cCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCC---cHHHHH-HHhCCCCHHHHHHH
Confidence 5 455666777788889999999999999999999999999877777766666554 445553 78999999999999
Q ss_pred HHHHHHHh
Q 017213 232 VKLLGDIL 239 (375)
Q Consensus 232 lKLLgelL 239 (375)
...|+.|-
T Consensus 243 ~~~L~~l~ 250 (252)
T 4db8_A 243 QEALEKLQ 250 (252)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 99998763
No 12
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.00 E-value=5.7 Score=38.32 Aligned_cols=185 Identities=14% Similarity=0.140 Sum_probs=121.4
Q ss_pred HHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc---CchhhHhHHHHHH
Q 017213 73 AEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE---NTDMALHYGAMLR 149 (375)
Q Consensus 73 ~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe---~~dial~~G~mLR 149 (375)
+.+...+.+..|+..|..=+-+.|..+..+..++.... ....+.+.. ..++..|+..-. ++++.-.+-..|.
T Consensus 280 ~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~----~~~~~~~~~-~~~l~~L~~lL~~~~~~~v~~~A~~~L~ 354 (528)
T 4b8j_A 280 QAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGD----DAQTQCIID-HQALPCLLSLLTQNLKKSIKKEACWTIS 354 (528)
T ss_dssp HHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC----HHHHHHHHT-TTHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCC----HHHHHHHHH-hhhHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 34556678899999998888888988888888887522 112333332 333333332221 4455555545555
Q ss_pred HHHH-HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhh-ChHHHHHHHHhhHHHHHHHHHHhhccCCCcch
Q 017213 150 ECIR-HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTR-HKSTVAEFLSKNYDWFFAEYNSKLLESSNYIT 227 (375)
Q Consensus 150 ecir-~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~-Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVT 227 (375)
.+.. .+.....++....+..+.+.++.+++++-..|..++..+... .+.....+...+ .+... ..||.+++--+
T Consensus 355 nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~---~i~~L-~~lL~~~d~~v 430 (528)
T 4b8j_A 355 NITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEG---CIKPL-CDLLICPDIRI 430 (528)
T ss_dssp HHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTT---CHHHH-HHGGGCSCHHH
T ss_pred HHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCC---CHHHH-HHHHcCCCHHH
Confidence 5543 455666777777888888888889999999999999888766 455544444433 23344 37888888888
Q ss_pred hhhhHHHHHHHhccccchH--------HHHHhhcChhhHHHHHHHhh
Q 017213 228 RRQAVKLLGDILLDRSNSV--------VMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 228 kRQslKLLgelLldr~N~~--------vM~rYis~~~NLkl~M~lL~ 266 (375)
+..++..|+.|+..-.+.. -....+.+..-+..+..|+.
T Consensus 431 ~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~ 477 (528)
T 4b8j_A 431 VTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQS 477 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHc
Confidence 9999999999985443321 23445555666777777766
No 13
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=92.24 E-value=3 Score=40.50 Aligned_cols=162 Identities=10% Similarity=0.114 Sum_probs=106.0
Q ss_pred HHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccC--chhhHhHHHHHHHH
Q 017213 74 EFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYEN--TDMALHYGAMLREC 151 (375)
Q Consensus 74 e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~--~dial~~G~mLRec 151 (375)
.+...+.+..|+..|..=+.+.|..+..+..++..... ...+.+. ...++..|+....+ +++-..+-..|..+
T Consensus 294 ~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~----~~~~~~~-~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l 368 (530)
T 1wa5_B 294 AVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGND----LQTQVVI-NAGVLPALRLLLSSPKENIKKEACWTISNI 368 (530)
T ss_dssp HHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH----HHHHHHH-HTTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCH----HHHHHHH-HcchHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34455788899999888888889888888888875321 1122222 23455555554433 34433444444444
Q ss_pred HH-HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhCh---HHHHHHHHhhHHHHHHHHHHhhccCCCcch
Q 017213 152 IR-HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHK---STVAEFLSKNYDWFFAEYNSKLLESSNYIT 227 (375)
Q Consensus 152 ir-~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk---~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVT 227 (375)
.. .+...+.++....+..+.+.++.+++++-..|..++..+..... .....++..+ .....- .++.+++.-+
T Consensus 369 ~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~---~l~~L~-~ll~~~~~~v 444 (530)
T 1wa5_B 369 TAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQG---CIKPLC-DLLEIADNRI 444 (530)
T ss_dssp TTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTT---CHHHHH-HHTTTCCHHH
T ss_pred HcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCC---CHHHHH-HHHhCCCHHH
Confidence 43 34455667777777888888888999999999999988877532 3333444332 344443 6888889999
Q ss_pred hhhhHHHHHHHhccccc
Q 017213 228 RRQAVKLLGDILLDRSN 244 (375)
Q Consensus 228 kRQslKLLgelLldr~N 244 (375)
+..++..|+.++....+
T Consensus 445 ~~~al~aL~~l~~~~~~ 461 (530)
T 1wa5_B 445 IEVTLDALENILKMGEA 461 (530)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999999999865543
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.81 E-value=3.9 Score=39.49 Aligned_cols=178 Identities=15% Similarity=0.146 Sum_probs=120.4
Q ss_pred HhhchHHHHHHhC-CCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc--cCchhhHhHHHHHHHHH
Q 017213 76 FRENTLRLLITCL-PKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY--ENTDMALHYGAMLRECI 152 (375)
Q Consensus 76 ~~~d~l~~Li~~l-~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY--e~~dial~~G~mLReci 152 (375)
...+.+..|+..| ..-+.+.++.++..+.+|.+..... ..... ..++..|+.-- .++++...+-..|..+.
T Consensus 199 ~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~---~~~~~---~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~ 272 (528)
T 4b8j_A 199 LANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQP---SFEQT---RPALPALARLIHSNDEEVLTDACWALSYLS 272 (528)
T ss_dssp HHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCC---CHHHH---TTHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred HHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCC---cHHHH---HHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 3446788888888 6678889999999999998754221 12222 34444444333 34555555555555555
Q ss_pred HH-HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCC-Ccchhhh
Q 017213 153 RH-QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESS-NYITRRQ 230 (375)
Q Consensus 153 r~-e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~-NYVTkRQ 230 (375)
.+ +.....++....+..+...+..++-++...|..++..+.+.........+..+ ....+- .+|.++ +--+++.
T Consensus 273 ~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~---~l~~L~-~lL~~~~~~~v~~~ 348 (528)
T 4b8j_A 273 DGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQ---ALPCLL-SLLTQNLKKSIKKE 348 (528)
T ss_dssp SSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTT---HHHHHH-HHHHSCCCHHHHHH
T ss_pred cCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhh---hHHHHH-HHHcCCCcHHHHHH
Confidence 43 33445677777888888999989889999999999999887766665655533 344453 778888 8999999
Q ss_pred hHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 231 AVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 231 slKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
++..|+.|... +.... .++-+..-+..++.+|.
T Consensus 349 A~~~L~nl~~~--~~~~~-~~~~~~~~i~~L~~lL~ 381 (528)
T 4b8j_A 349 ACWTISNITAG--NKDQI-QAVINAGIIGPLVNLLQ 381 (528)
T ss_dssp HHHHHHHHHTS--CHHHH-HHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHCC--CHHHH-HHHHHCCCHHHHHHHHh
Confidence 99999999853 33333 23334466778888887
No 15
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=90.41 E-value=2.6 Score=41.48 Aligned_cols=182 Identities=15% Similarity=0.174 Sum_probs=104.9
Q ss_pred HHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhH-------hHH
Q 017213 73 AEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMAL-------HYG 145 (375)
Q Consensus 73 ~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial-------~~G 145 (375)
..+...+.+..|+..|..=+-+.|..++....++-..... .-+.+... ..+..|+.--..++..- .+.
T Consensus 156 ~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~----~r~~i~~~-g~i~~Ll~lL~~~~~~~~~~~~~~~a~ 230 (529)
T 3tpo_A 156 KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSA----FRDLVIKH-GAIDPLLALLAVPDLSTLACGYLRNLT 230 (529)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH----HHHHHHHT-TCHHHHHHTTCSSCGGGSCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHH----HHHHHHHc-CCcHHHHHHHhccchhHhHHHHHHHHH
Confidence 3456667788889988888888888888888887643211 12333222 12222222222222111 122
Q ss_pred HHHHHHHHHH-HHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCC
Q 017213 146 AMLRECIRHQ-SVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSN 224 (375)
Q Consensus 146 ~mLRecir~e-~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~N 224 (375)
..|..+.++. .........+.+-.+...++.++-++..||...+..+...+........... .....- .||.+++
T Consensus 231 ~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g---~i~~Lv-~lL~~~~ 306 (529)
T 3tpo_A 231 WTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKG---VVPQLV-KLLGATE 306 (529)
T ss_dssp HHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTT---CHHHHH-HHHTCSC
T ss_pred HHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhcc---chHHHH-HHhcCCC
Confidence 2222222221 1111111112333455566778888999999888887765554443333332 233343 7899999
Q ss_pred cchhhhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 225 YITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 225 YVTkRQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
.-.++.++..||.|... ..-.+..+-+..-+..++.||+
T Consensus 307 ~~v~~~a~~aL~nl~~~---~~~~~~~i~~~g~l~~L~~LL~ 345 (529)
T 3tpo_A 307 LPIVTPALRAIGNIVTG---TDEQTQKVIDAGALAVFPSLLT 345 (529)
T ss_dssp HHHHHHHHHHHHHHTTS---CHHHHHHHHHTTGGGGHHHHTT
T ss_pred hhHHHHHHHHHHHHHcc---chHHHHHHhhcccHHHHHHHHc
Confidence 99999999999999843 2334555666777888888888
No 16
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=89.76 E-value=4.9 Score=37.06 Aligned_cols=180 Identities=16% Similarity=0.214 Sum_probs=110.2
Q ss_pred HHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc---CchhhHhHHHHHHHH
Q 017213 75 FFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE---NTDMALHYGAMLREC 151 (375)
Q Consensus 75 ~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe---~~dial~~G~mLRec 151 (375)
+...+.+..|+..|..=+-+.|..+...+.++...... ..+.+.. ..++..|+.--. ++++...+-..|..+
T Consensus 103 ~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l 177 (450)
T 2jdq_A 103 VIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTM----CRDYVLD-CNILPPLLQLFSKQNRLTMTRNAVWALSNL 177 (450)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH----HHHHHHH-TTCHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHH----HHHHHHH-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 34467889999999887888999998888888753311 1222221 233444433332 345554554555554
Q ss_pred HHHH-HHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhh
Q 017213 152 IRHQ-SVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQ 230 (375)
Q Consensus 152 ir~e-~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQ 230 (375)
.++. .-.+..+..+.+..+.+.+..++=++..+|..++..+............... .+...- .++.+++.-++..
T Consensus 178 ~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~i~~L~-~ll~~~~~~v~~~ 253 (450)
T 2jdq_A 178 CRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAG---VCRRLV-ELLMHNDYKVVSP 253 (450)
T ss_dssp HCCSSSCCCGGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTT---THHHHH-HHTTCSCHHHHHH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcC---cHHHHH-HHHCCCchhHHHH
Confidence 4432 1111111134555666677777778888888888887665444443333332 344443 6888889899999
Q ss_pred hHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 231 AVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 231 slKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
++..||.+.....+ ..+.+-+..-+..++.+|.
T Consensus 254 a~~~L~~l~~~~~~---~~~~~~~~~~l~~L~~ll~ 286 (450)
T 2jdq_A 254 ALRAVGNIVTGDDI---QTQVILNCSALQSLLHLLS 286 (450)
T ss_dssp HHHHHHHHTTSCHH---HHHHHHTTTHHHHHHHHTT
T ss_pred HHHHHHHHhhCChH---HHHHHHHCccHHHHHHHHc
Confidence 99999999864332 2344445577888888888
No 17
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=89.43 E-value=9.3 Score=38.50 Aligned_cols=113 Identities=10% Similarity=0.079 Sum_probs=58.0
Q ss_pred chhHHHHHHHhccCc-hhhHhHHHH--HHHHHHH-HHHHHHHhcchh----hhhhhhhccCC--ChhhhhhHHHHHHHHH
Q 017213 124 NIDLLDILIAGYENT-DMALHYGAM--LRECIRH-QSVARYVLESQH----MKKFFDYIQLP--NFDIAADAAATFKELL 193 (375)
Q Consensus 124 ~~~il~~L~~gYe~~-dial~~G~m--LRecir~-e~la~~iL~s~~----~~~fF~yi~~~--~FdIasDAf~TfkelL 193 (375)
-|+++..|+..-.++ +-..-.|.+ |..+.+. ..-.+ ++ .++ +..+...+..+ +-+|-.-|..++..++
T Consensus 132 w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~-~~-~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~ 209 (861)
T 2bpt_A 132 WPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQ-AL-VSSSNNILIAIVQGAQSTETSKAVRLAALNALADSL 209 (861)
T ss_dssp CHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSS-TT-GGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHG
T ss_pred cHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhh-HH-HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 488998888887665 433333322 2222211 00000 00 112 22333444555 6777777777777664
Q ss_pred hhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhcc
Q 017213 194 TRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLD 241 (375)
Q Consensus 194 t~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLld 241 (375)
..-........ ..+.+..... .++.+++.-.|+.+++.|+++...
T Consensus 210 ~~~~~~~~~~~--~~~~ll~~l~-~~~~~~~~~~r~~a~~~l~~l~~~ 254 (861)
T 2bpt_A 210 IFIKNNMEREG--ERNYLMQVVC-EATQAEDIEVQAAAFGCLCKIMSK 254 (861)
T ss_dssp GGCHHHHTSHH--HHHHHHHHHH-HHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccChh--HHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHH
Confidence 31110000000 0122444443 677889999999999999998843
No 18
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=85.41 E-value=39 Score=35.36 Aligned_cols=177 Identities=12% Similarity=0.131 Sum_probs=118.7
Q ss_pred hchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc---cCchhhHhHHHHHHHHHHH
Q 017213 78 ENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY---ENTDMALHYGAMLRECIRH 154 (375)
Q Consensus 78 ~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY---e~~dial~~G~mLRecir~ 154 (375)
.+.+..|+..|..=+-+.|..+.....++-... ....-+...++++..|+..- +++++-..+-..|+.+.++
T Consensus 149 ~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~ 223 (780)
T 2z6g_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH 223 (780)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-----HHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS
T ss_pred hCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCC-----hhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC
Confidence 556777777776667778888888887776532 11233444567777766543 4778888888899998888
Q ss_pred HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHH
Q 017213 155 QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKL 234 (375)
Q Consensus 155 e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKL 234 (375)
+.....+.....+..+.+.++.++-++-..|+.++..+...+..........+ .+...- .||.++|--.++.++..
T Consensus 224 ~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g---~v~~Lv-~lL~~~~~~v~~~a~~a 299 (780)
T 2z6g_A 224 REGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAG---GLQKMV-ALLNKTNVKFLAITTDC 299 (780)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---HHHHHH-HGGGCCCHHHHHHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcC---CHHHHH-HHHhcCCHHHHHHHHHH
Confidence 77777777788888999999999988999999999998876544333333333 234453 78888776667777777
Q ss_pred HHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 235 LGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 235 LgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
|+.+-. .|.......+. ...+..++.+|+
T Consensus 300 L~~La~--~~~e~~~~i~~-~~~i~~Lv~lL~ 328 (780)
T 2z6g_A 300 LQILAY--GNQESKLIILA-SGGPQALVNIMR 328 (780)
T ss_dssp HHHHHT--TCHHHHHHHHT-TTHHHHHHHHHT
T ss_pred HHHHhc--CChHHHHHHHH-cCCHHHHHHHHh
Confidence 775543 33333333333 245555555555
No 19
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=84.97 E-value=4.5 Score=41.77 Aligned_cols=172 Identities=9% Similarity=0.148 Sum_probs=97.6
Q ss_pred HHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc--CchhhHhHHHHHHHHHHHHHHHH
Q 017213 82 RLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE--NTDMALHYGAMLRECIRHQSVAR 159 (375)
Q Consensus 82 ~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe--~~dial~~G~mLRecir~e~la~ 159 (375)
..++..+..-+.+.|.-+...+.+.+++.-.. .+. .....|-..|+.+-. ++.+-...+..+...++++...
T Consensus 51 ~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~~-~~~----~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~- 124 (852)
T 4fdd_A 51 IFVLTKLKSEDEPTRSLSGLILKNNVKAHFQN-FPN----GVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQ- 124 (852)
T ss_dssp HHHHHTCTTSCHHHHHHHHHHHHHHTTTSGGG-CCH----HHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTT-
T ss_pred HHHHhccCCCChHHHHHHHHHHHHHHHHccCC-CCH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCcc-
Confidence 34444555667778887777777776532111 110 112334444444433 4456666777777766665211
Q ss_pred HHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHH-HHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHH
Q 017213 160 YVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVA-EFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDI 238 (375)
Q Consensus 160 ~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~va-eFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgel 238 (375)
-..+.+..+++.++.++..+---|+.++..+....+.... +.+....+.++..+- +++.+++--.|..|++.|+.+
T Consensus 125 --~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~-~~l~~~~~~vR~~A~~aL~~~ 201 (852)
T 4fdd_A 125 --NWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL-QFFKHSSPKIRSHAVACVNQF 201 (852)
T ss_dssp --TCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHT-TTTTCSSHHHHHHHHHHHHTT
T ss_pred --ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHH
Confidence 0112344556677777777777777777777664443221 122223566666775 788899999999999999988
Q ss_pred hccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 239 LLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 239 Lldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
+...+ ..+..++ ++-+..+..++.
T Consensus 202 ~~~~~--~~~~~~~--~~~l~~l~~~~~ 225 (852)
T 4fdd_A 202 IISRT--QALMLHI--DSFIENLFALAG 225 (852)
T ss_dssp TTTTC--HHHHTSH--HHHHHHHHHHHT
T ss_pred Hhccc--HHHHHHH--HHHHHHHHHHcC
Confidence 75433 2222222 244555555555
No 20
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=83.96 E-value=23 Score=33.44 Aligned_cols=175 Identities=14% Similarity=0.123 Sum_probs=110.8
Q ss_pred hhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhh-c-hhHHHHHHHhccCchhhHhHHHHHHHHHHH
Q 017213 77 RENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEA-N-IDLLDILIAGYENTDMALHYGAMLRECIRH 154 (375)
Q Consensus 77 ~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~-~-~~il~~L~~gYe~~dial~~G~mLRecir~ 154 (375)
..+.+..|+..+..=+.+.|..+.....++-..... ...-+.. . .+.+-.++...+..+....++..|+.+..+
T Consensus 141 ~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~----~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~ 216 (529)
T 1jdh_A 141 LAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQE----SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 216 (529)
T ss_dssp HHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS
T ss_pred HcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHH----HHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcC
Confidence 456777888888776666666655556555431111 1111111 1 223333445556666666778888887777
Q ss_pred HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHH
Q 017213 155 QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKL 234 (375)
Q Consensus 155 e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKL 234 (375)
+.....+.....+..+.+.++.++=++...|..++..+-...+.. ..........- +|+.+++--++..+...
T Consensus 217 ~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~------~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 289 (529)
T 1jdh_A 217 SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ------EGMEGLLGTLV-QLLGSDDINVVTCAAGI 289 (529)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTC------SCCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred cccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhh------HHHHhHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 777778888888888888888887777778887777664432211 01224555554 78889998899999999
Q ss_pred HHHHhccc-cchHHHHHhhcChhhHHHHHHHhh
Q 017213 235 LGDILLDR-SNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 235 LgelLldr-~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
|+.+-... .|.. .+.+..-+..++.+|+
T Consensus 290 L~~L~~~~~~~~~----~~~~~~~v~~L~~ll~ 318 (529)
T 1jdh_A 290 LSNLTCNNYKNKM----MVCQVGGIEALVRTVL 318 (529)
T ss_dssp HHHHTTTCHHHHH----HHHHTTHHHHHHHHHH
T ss_pred HHHHhcCCHHHHH----HHHHcCChHHHHHHHH
Confidence 99996532 2222 3334556778888887
No 21
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=83.38 E-value=36 Score=33.35 Aligned_cols=157 Identities=10% Similarity=0.118 Sum_probs=90.6
Q ss_pred HHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhc--hhHHHHHHHhccCchhhHhHHHHHHH-
Q 017213 74 EFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEAN--IDLLDILIAGYENTDMALHYGAMLRE- 150 (375)
Q Consensus 74 e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~--~~il~~L~~gYe~~dial~~G~mLRe- 150 (375)
.+...+.+..|+..|..=+.+.+..+.....++..... .....+... ...+..|+.. .++++--.+...|..
T Consensus 288 ~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~----~~~~~i~~~g~l~~L~~LL~~-~~~~i~~~a~~aL~nl 362 (529)
T 3tpo_A 288 MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD----EQTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSNI 362 (529)
T ss_dssp HHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH----HHHHHHHHTTGGGGHHHHTTC-SSHHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccch----HHHHHHhhcccHHHHHHHHcC-CCHHHHHHHHHHHHHH
Confidence 35566788888888888888888888888888764221 111222211 1222223322 234443334444444
Q ss_pred HHHHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhC-hHHHHHHHHhhHHHHHHHHHHhhccCCCcchhh
Q 017213 151 CIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRH-KSTVAEFLSKNYDWFFAEYNSKLLESSNYITRR 229 (375)
Q Consensus 151 cir~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~H-k~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkR 229 (375)
|...+.....+.+...+..+...+..+++++-..|..++.-+.... ...+......+ ...-. ..||.+++-=+.+
T Consensus 363 ~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g---~i~~L-~~LL~~~d~~i~~ 438 (529)
T 3tpo_A 363 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCG---IIEPL-MNLLSAKDTKIIQ 438 (529)
T ss_dssp HTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTT---CHHHH-HHGGGCSCHHHHH
T ss_pred hcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCc---CHHHH-HHHhcCCCHHHHH
Confidence 3345666667777778888889999999999999988887776532 22222222222 12222 2466666655555
Q ss_pred hhHHHHHHHh
Q 017213 230 QAVKLLGDIL 239 (375)
Q Consensus 230 QslKLLgelL 239 (375)
.+|.-|..|+
T Consensus 439 ~~L~aL~nil 448 (529)
T 3tpo_A 439 VILDAISNIF 448 (529)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 22
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=82.12 E-value=31 Score=31.66 Aligned_cols=113 Identities=10% Similarity=0.055 Sum_probs=56.9
Q ss_pred chhHHHHHHHhccCc--hhhHhHH--HHHHHHHH---HHHHHHHHhcchhhhhhhhhccCC--ChhhhhhHHHHHHHHHh
Q 017213 124 NIDLLDILIAGYENT--DMALHYG--AMLRECIR---HQSVARYVLESQHMKKFFDYIQLP--NFDIAADAAATFKELLT 194 (375)
Q Consensus 124 ~~~il~~L~~gYe~~--dial~~G--~mLRecir---~e~la~~iL~s~~~~~fF~yi~~~--~FdIasDAf~TfkelLt 194 (375)
-|+++..|+....++ +...-.| ..|+...+ .+.+..++ .+.+..+...++.+ +=+|-.-|..++..++.
T Consensus 126 w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~ 203 (462)
T 1ibr_B 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSLE 203 (462)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH--HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 488988888877655 3332222 22333322 11111000 11233444555555 56666667777766542
Q ss_pred hChHHHHHHHHhhHHH-HHHHHHHhhccCCCcchhhhhHHHHHHHhccc
Q 017213 195 RHKSTVAEFLSKNYDW-FFAEYNSKLLESSNYITRRQAVKLLGDILLDR 242 (375)
Q Consensus 195 ~Hk~~vaeFl~~Nyd~-Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr 242 (375)
--+...... .+.. +.... ..++.+++--.|+.+++.|+.+....
T Consensus 204 ~~~~~~~~~---~~~~~l~~~l-~~~~~~~~~~vr~~~~~~l~~l~~~~ 248 (462)
T 1ibr_B 204 FTKANFDKE---SERHFIMQVV-CEATQCPDTRVRVAALQNLVKIMSLY 248 (462)
T ss_dssp TTHHHHTSH---HHHHHHHHHH-HHHTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhhh---HHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 111000000 0111 23333 25677888888999999999988543
No 23
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=82.09 E-value=39 Score=33.02 Aligned_cols=157 Identities=10% Similarity=0.105 Sum_probs=90.4
Q ss_pred HHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHh--ccCchhhHhHHHHHHHH
Q 017213 74 EFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAG--YENTDMALHYGAMLREC 151 (375)
Q Consensus 74 e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~g--Ye~~dial~~G~mLRec 151 (375)
.+...+.+..|+..|..=+.+.+..+.....++...... ....+.. ...+..|+.- -.++++--.+-..|..+
T Consensus 269 ~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~----~~~~i~~-~g~l~~L~~LL~~~~~~v~~~A~~aL~nl 343 (510)
T 3ul1_B 269 MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVID-AGALAVFPSLLTNPKTNIQKEATWTMSNI 343 (510)
T ss_dssp HHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTGGGGCC-CTTCSSHHHHHHHHHHHHHH
T ss_pred HHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH----HHHHHhh-ccchHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 345667888888888888888888888888777642211 1111111 1111111111 12333333333344433
Q ss_pred -HHHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhC-hHHHHHHHHhhHHHHHHHHHHhhccCCCcchhh
Q 017213 152 -IRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRH-KSTVAEFLSKNYDWFFAEYNSKLLESSNYITRR 229 (375)
Q Consensus 152 -ir~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~H-k~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkR 229 (375)
...+.....+.+...+..+.+.++.+++++-..|..++.-+.... ...+......+ ...-. ..||.+++-=+.+
T Consensus 344 ~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g---~i~~L-~~LL~~~d~~i~~ 419 (510)
T 3ul1_B 344 TAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCG---IIEPL-MNLLSAKDTKIIQ 419 (510)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTT---CHHHH-HHGGGCSCHHHHH
T ss_pred HcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCC---CHHHH-HHHhcCCCHHHHH
Confidence 334556666777778888889999999999999998888776533 22222222322 12233 2567776666666
Q ss_pred hhHHHHHHHh
Q 017213 230 QAVKLLGDIL 239 (375)
Q Consensus 230 QslKLLgelL 239 (375)
.+|..|..|+
T Consensus 420 ~~L~aL~nil 429 (510)
T 3ul1_B 420 VILDAISNIF 429 (510)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777766665
No 24
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=82.07 E-value=57 Score=35.33 Aligned_cols=199 Identities=11% Similarity=0.124 Sum_probs=126.8
Q ss_pred HHHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhc---hhHHHHHHHhccCchhhHhHHHHH
Q 017213 72 TAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEAN---IDLLDILIAGYENTDMALHYGAML 148 (375)
Q Consensus 72 a~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~---~~il~~L~~gYe~~dial~~G~mL 148 (375)
++.+...+.+..|+..+..=+-+.|+.++.+..|+-..+ ...+.+..+ |-++..|-.|.... --.-+.++-
T Consensus 488 ~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~-----~~r~~Vv~~Gaip~Lv~LL~s~~~~~-k~~Aa~AL~ 561 (810)
T 3now_A 488 ITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLK-----ELRGKVVQEGGVKALLRMALEGTEKG-KRHATQALA 561 (810)
T ss_dssp HHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSH-----HHHHHHHHTTHHHHHHHHHHSSCHHH-HHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----HHHHHHHHCCCHHHHHHHHccCCHHH-HHHHHHHHH
Confidence 477888899999999999888899999999999996421 244555553 66666666554311 111223333
Q ss_pred HHHHHH-HHHH--H-HHhcchhhhhhhhhccCCCh-hhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCC
Q 017213 149 RECIRH-QSVA--R-YVLESQHMKKFFDYIQLPNF-DIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESS 223 (375)
Q Consensus 149 Recir~-e~la--~-~iL~s~~~~~fF~yi~~~~F-dIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~ 223 (375)
+-|+-. +..+ . .+. +.+..+.+.+..+.- ....+|..++.-|.+.........+... .+...- .|+.++
T Consensus 562 nL~~~~~p~~~~~~~~~~--~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG---~l~~Lv-~LL~s~ 635 (810)
T 3now_A 562 RIGITINPEVSFSGQRSL--DVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQ---GVSKIE-YYLMED 635 (810)
T ss_dssp HHHHHSCHHHHTTTHHHH--HTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHH-HHHHSC
T ss_pred HHhcCCChhhhhcchhhh--cHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcC---CHHHHH-HHHcCC
Confidence 333321 1111 0 011 133344444443322 2234677777777665544444444433 345554 788899
Q ss_pred CcchhhhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhhhhccCCcchhHHHHHHHhhhcCCCcccccccccccCC
Q 017213 224 NYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRVRYFPRMHVEDIFYLAYQKLQGTEPVTFDKISLHMES 303 (375)
Q Consensus 224 NYVTkRQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 303 (375)
|--.++.|+.+|+.|...+ ...++++.+..-++.+..||. +.
T Consensus 636 ~~~Vq~~A~~~L~NLa~~~---~~~~~~v~~~g~l~~Lv~LL~-----------------------------------s~ 677 (810)
T 3now_A 636 HLYLTRAAAQCLCNLVMSE---DVIKMFEGNNDRVKFLALLCE-----------------------------------DE 677 (810)
T ss_dssp CTTHHHHHHHHHHHHTTSH---HHHHHHHSSSSHHHHHHHGGG-----------------------------------CS
T ss_pred CHHHHHHHHHHHHHHhCCh---HHHHHHHhccCcHHHHHHHhc-----------------------------------CC
Confidence 9999999999999999755 456778866788999999999 78
Q ss_pred Ccccchhhheeeeeeee
Q 017213 304 SKSIQIEAFHVFKLFAA 320 (375)
Q Consensus 304 sk~Iq~EAFhvFKvFvA 320 (375)
+..+|-+|--.+--..+
T Consensus 678 d~~vq~~Aa~ALanLt~ 694 (810)
T 3now_A 678 DEETATACAGALAIITS 694 (810)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhC
Confidence 88888888755555544
No 25
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=81.11 E-value=24 Score=34.59 Aligned_cols=180 Identities=13% Similarity=0.167 Sum_probs=115.9
Q ss_pred HHhhchHHHHHHhCCCCChh-----hhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHh--ccCchhhHhHHHH
Q 017213 75 FFRENTLRLLITCLPKLNLE-----ARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAG--YENTDMALHYGAM 147 (375)
Q Consensus 75 ~~~~d~l~~Li~~l~~L~fE-----~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~g--Ye~~dial~~G~m 147 (375)
+...+.+..|+..+..-+.+ ..+.++....++.+.... .+..... ..++..|+.. .+++++-..+-..
T Consensus 181 v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~--~~~~~~~---~~~lp~L~~LL~~~~~~v~~~A~~a 255 (510)
T 3ul1_B 181 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNP--APPLDAV---EQILPTLVRLLHHNDPEVLADSCWA 255 (510)
T ss_dssp HHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSS--CCCHHHH---HHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccc--hhHHHHH---HhHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34556777888888765544 344555566666653321 1122222 2344444433 3455665556666
Q ss_pred HHHHHHHH-HHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcc
Q 017213 148 LRECIRHQ-SVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYI 226 (375)
Q Consensus 148 LRecir~e-~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYV 226 (375)
|+.+..+. .....+.....+..+.+++..++-.+..-|..++..+.+.........+..+ ....+- .||.+++--
T Consensus 256 L~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g---~l~~L~-~LL~~~~~~ 331 (510)
T 3ul1_B 256 ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAG---ALAVFP-SLLTNPKTN 331 (510)
T ss_dssp HHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---GGGGCC--CTTCSSHH
T ss_pred HHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhcc---chHHHH-HHhcCCCHH
Confidence 66666543 4455677777888888999999999999999999999887766555555443 233443 789999999
Q ss_pred hhhhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 227 TRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 227 TkRQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
+|+.+...|+.|.....+ ....+-+..-+..++.+|+
T Consensus 332 v~~~A~~aL~nl~a~~~~---~~~~v~~~g~i~~Lv~lL~ 368 (510)
T 3ul1_B 332 IQKEATWTMSNITAGRQD---QIQQVVNHGLVPFLVGVLS 368 (510)
T ss_dssp HHHHHHHHHHHHTTSCHH---HHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHH---HHHHHHhcCCHHHHHHHHc
Confidence 999999999999754322 2334445567778888888
No 26
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=80.50 E-value=19 Score=34.42 Aligned_cols=164 Identities=14% Similarity=0.202 Sum_probs=108.2
Q ss_pred HHhhchHHHHHHhC-CCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhc----hhHHHHHHHhccCc--hhhHhHHHH
Q 017213 75 FFRENTLRLLITCL-PKLNLEARKDATQVVANLQRQQVHSKLIASDYLEAN----IDLLDILIAGYENT--DMALHYGAM 147 (375)
Q Consensus 75 ~~~~d~l~~Li~~l-~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~----~~il~~L~~gYe~~--dial~~G~m 147 (375)
+...+.+..|+..| ..=+-+.++.++....+|-....+.+ .. +... |-++..|-.+.+.. ++.-.+...
T Consensus 166 i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk---~~-i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~a 241 (354)
T 3nmw_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK---AD-ICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 241 (354)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHH---HH-HHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhh---HH-HHHhcCcHHHHHHHhccCCCcccHHHHHHHHHH
Confidence 34456677777753 33456777776655555543111111 11 1112 22333332222221 355666677
Q ss_pred HHHHHH----HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCC
Q 017213 148 LRECIR----HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESS 223 (375)
Q Consensus 148 LRecir----~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~ 223 (375)
||-+.. .+.-...+.+...+..+.+.++.+++++-..|..++..+-.............+- +...- .||.++
T Consensus 242 L~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~---i~~Lv-~LL~s~ 317 (354)
T 3nmw_A 242 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGA---VSMLK-NLIHSK 317 (354)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTH---HHHHH-TTTTCS
T ss_pred HHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCC---HHHHH-HHHhCC
Confidence 887664 5666677888888999999999999999999999999987666766666666553 33443 899999
Q ss_pred CcchhhhhHHHHHHHhccccchH
Q 017213 224 NYITRRQAVKLLGDILLDRSNSV 246 (375)
Q Consensus 224 NYVTkRQslKLLgelLldr~N~~ 246 (375)
+--+|+.|...|..|..++.+..
T Consensus 318 ~~~i~~~A~~aL~nL~~~~~~~~ 340 (354)
T 3nmw_A 318 HKMIAMGSAAALRNLMANRPAKY 340 (354)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999998877643
No 27
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=80.38 E-value=21 Score=39.18 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=60.6
Q ss_pred cCchhhHhHHHHHHHHHHHHHHHHHHhcchhhhhhhhhc----cCCChhhhhhHHHHHHHHHhh-----ChHHHHHHHHh
Q 017213 136 ENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYI----QLPNFDIAADAAATFKELLTR-----HKSTVAEFLSK 206 (375)
Q Consensus 136 e~~dial~~G~mLRecir~e~la~~iL~s~~~~~fF~yi----~~~~FdIasDAf~TfkelLt~-----Hk~~vaeFl~~ 206 (375)
++||.-...=.+||.++.|-.-+=.-+.++.|..+++.+ +.++-||+.-++.++.+++.+ ....+.+|..+
T Consensus 816 ~~Pe~r~~ff~ll~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~~~~~~~~~f~~~ 895 (1023)
T 4hat_C 816 EYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFHKN 895 (1023)
T ss_dssp SSHHHHHHHHHHHHHHHHHCTHHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHChHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 578888888888888887743332223344888888855 779999999999999999972 34567788888
Q ss_pred hHHHHHHHHH
Q 017213 207 NYDWFFAEYN 216 (375)
Q Consensus 207 Nyd~Ff~~yn 216 (375)
.|-.++.+.-
T Consensus 896 ~~~~~~~~~~ 905 (1023)
T 4hat_C 896 YFFIFVSETF 905 (1023)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888766654
No 28
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=79.34 E-value=30 Score=29.88 Aligned_cols=160 Identities=11% Similarity=0.141 Sum_probs=94.4
Q ss_pred HHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc-CchhhH------hHHHHHHHHHHHHH
Q 017213 84 LITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE-NTDMAL------HYGAMLRECIRHQS 156 (375)
Q Consensus 84 Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe-~~dial------~~G~mLRecir~e~ 156 (375)
+...+..=+|..|+.+..-...++.... +.... ...+++..|...-. +++... ..|.+.+.. +. .
T Consensus 20 l~~~l~s~~w~~R~~a~~~L~~l~~~~~--~~~~~----~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l-~~-~ 91 (242)
T 2qk2_A 20 FYDKLEEKKWTLRKESLEVLEKLLTDHP--KLENG----EYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL-AK-R 91 (242)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHCS--SBCCC----CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH-GG-G
T ss_pred HHhhhccCCHHHHHHHHHHHHHHHccCC--CCCCC----CHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH-hh-h
Confidence 3344556789999999988888887421 11111 13566777766663 443322 222232211 11 0
Q ss_pred HHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHH
Q 017213 157 VARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLG 236 (375)
Q Consensus 157 la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLg 236 (375)
+..|+ ...+-.+++.+.-++=.|-.-|..++..+.... +++.+....- ..+.+.|.-+|..++.+|+
T Consensus 92 ~~~~~--~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~----------~~~~ll~~l~-~~l~~~~~~vr~~~l~~l~ 158 (242)
T 2qk2_A 92 FSNYA--SACVPSLLEKFKEKKPNVVTALREAIDAIYAST----------SLEAQQESIV-ESLSNKNPSVKSETALFIA 158 (242)
T ss_dssp GHHHH--HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS----------CHHHHHHHHH-HHTTCSCHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC----------CHHHHHHHHH-HHHcCCChHHHHHHHHHHH
Confidence 11111 112334555556677778888888888876632 3556666664 7888999999999999999
Q ss_pred HHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 237 DILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 237 elLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
.++..-.....+..|+ +.-+..++.+|.
T Consensus 159 ~~l~~~~~~~~~~~~l--~~l~p~l~~~l~ 186 (242)
T 2qk2_A 159 RALTRTQPTALNKKLL--KLLTTSLVKTLN 186 (242)
T ss_dssp HHHTTCCGGGCCHHHH--HHHHHHHHHHHT
T ss_pred HHHHHcCCCCccHHHH--HHHHHHHHHHhc
Confidence 9885532333344455 255666666776
No 29
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=77.99 E-value=10 Score=35.51 Aligned_cols=105 Identities=14% Similarity=0.201 Sum_probs=75.0
Q ss_pred HHHHHHHhcchhhhhhhhhccC-CChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHH
Q 017213 155 QSVARYVLESQHMKKFFDYIQL-PNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVK 233 (375)
Q Consensus 155 e~la~~iL~s~~~~~fF~yi~~-~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslK 233 (375)
+.....+++...+..+...++. ++=.+...|..++-.+...++.....|...+ .+.-.- .+|.+++.-+++.+.-
T Consensus 114 ~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~g---gi~~L~-~lL~~~d~~v~~~A~~ 189 (296)
T 1xqr_A 114 AAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLD---GFSVLM-RAMQQQVQKLKVKSAF 189 (296)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTT---HHHHHH-HHHHSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC---CHHHHH-HHHcCCCHHHHHHHHH
Confidence 3344456666666666666653 4667788888888887766777666787765 344553 7889999999999999
Q ss_pred HHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 234 LLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 234 LLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
+|+.+...-. -..+++-+..-++.++.||+
T Consensus 190 aLs~L~~~~~---~~~~~vv~~g~i~~Lv~LL~ 219 (296)
T 1xqr_A 190 LLQNLLVGHP---EHKGTLCSMGMVQQLVALVR 219 (296)
T ss_dssp HHHHHHHHCG---GGHHHHHHTTHHHHHHHHHT
T ss_pred HHHHHHhCCh---HHHHHHHHcCCHHHHHHHHc
Confidence 9999986521 12345556788899999999
No 30
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=77.98 E-value=59 Score=32.51 Aligned_cols=159 Identities=16% Similarity=0.111 Sum_probs=108.5
Q ss_pred HHhhchHHHHHHhCCCCC-hhhhhhHHHHHHHHhhhcccCccchhHHhhh-c--hhHHHHHHHhc---------------
Q 017213 75 FFRENTLRLLITCLPKLN-LEARKDATQVVANLQRQQVHSKLIASDYLEA-N--IDLLDILIAGY--------------- 135 (375)
Q Consensus 75 ~~~~d~l~~Li~~l~~L~-fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~-~--~~il~~L~~gY--------------- 135 (375)
+...+.+..|+..|..=. .+.|+.+.....|+..... ....+.. . |.++..|-.+.
T Consensus 348 v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~-----~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~ 422 (644)
T 2z6h_A 348 VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA-----NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQ 422 (644)
T ss_dssp HHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGG-----GHHHHHHTTHHHHHHHHHHHHHHHHTTC---------
T ss_pred HHHccChHHHHHHhCccCchHHHHHHHHHHHHHccCHH-----HHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccch
Confidence 445577888888887653 6789999998888875321 1122221 1 44444443321
Q ss_pred -----cCchhhHhHHHHHHHHHHHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHH
Q 017213 136 -----ENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDW 210 (375)
Q Consensus 136 -----e~~dial~~G~mLRecir~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~ 210 (375)
...++...+-..|+.+.+++.....+.....+..+.+.+..++-+|..-|..++..+. .++.....+....-
T Consensus 423 ~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~-~~~~~~~~i~~~g~-- 499 (644)
T 2z6h_A 423 FVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGA-- 499 (644)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTC--
T ss_pred hcccccHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHcCC--
Confidence 2334555566777888888877777777788889999999999999888888888865 45554433333221
Q ss_pred HHHHHHHhhccCCCcchhhhhHHHHHHHhcccc
Q 017213 211 FFAEYNSKLLESSNYITRRQAVKLLGDILLDRS 243 (375)
Q Consensus 211 Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~ 243 (375)
.... ..|+.++|--.|..+...|+.+..++.
T Consensus 500 -l~~L-~~ll~~~~~~vr~~A~~aL~~l~~~~~ 530 (644)
T 2z6h_A 500 -TAPL-TELLHSRNEGVATYAAAVLFRMSEDKP 530 (644)
T ss_dssp -HHHH-HHHTTCSCHHHHHHHHHHHHHHTTTSC
T ss_pred -hhHH-HHHHcCCCHHHHHHHHHHHHHHhccCc
Confidence 2344 378999999999999999999988774
No 31
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=77.19 E-value=40 Score=33.64 Aligned_cols=161 Identities=14% Similarity=0.196 Sum_probs=106.7
Q ss_pred HHhhchHHHHHHh-CCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHH----HHHHhccCc--hhhHhHHHH
Q 017213 75 FFRENTLRLLITC-LPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLD----ILIAGYENT--DMALHYGAM 147 (375)
Q Consensus 75 ~~~~d~l~~Li~~-l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~----~L~~gYe~~--dial~~G~m 147 (375)
+...+.+..|+.. +..=+-+.++.+.....||-....+.+. -+......+. .|-.+-+.+ ++.-.+...
T Consensus 282 I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~----~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~a 357 (458)
T 3nmz_A 282 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA----DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 357 (458)
T ss_dssp HHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHH----HHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHH----HHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHH
Confidence 3445677778876 4444667777666555555431111111 1121222233 332222222 356666677
Q ss_pred HHHHHH----HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCC
Q 017213 148 LRECIR----HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESS 223 (375)
Q Consensus 148 LRecir----~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~ 223 (375)
||.+.. .+.....+.+...+-.+.+.+..+++++-..|..++..+-..++..........- +.-.- .||.++
T Consensus 358 L~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~---I~~Lv-~LL~s~ 433 (458)
T 3nmz_A 358 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGA---VSMLK-NLIHSK 433 (458)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTH---HHHHH-TTTTCS
T ss_pred HHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCC---HHHHH-HHHhCC
Confidence 887664 5666677888888899999999999999999999999997677777666666553 33443 799999
Q ss_pred CcchhhhhHHHHHHHhcccc
Q 017213 224 NYITRRQAVKLLGDILLDRS 243 (375)
Q Consensus 224 NYVTkRQslKLLgelLldr~ 243 (375)
+--+++.|..-|..|+.+++
T Consensus 434 ~~~v~~~Aa~AL~nL~~~~p 453 (458)
T 3nmz_A 434 HKMIAMGSAAALRNLMANRP 453 (458)
T ss_dssp SHHHHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999997654
No 32
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=75.50 E-value=17 Score=39.21 Aligned_cols=148 Identities=13% Similarity=0.146 Sum_probs=92.7
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCc--hhhHhHHHHHHHHHHHHHH
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT--DMALHYGAMLRECIRHQSV 157 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~--dial~~G~mLRecir~e~l 157 (375)
++..|+..|..=+.+.|+-+......+...- +. . ..+.|+..|+.+..++ .+-..++..|..++.+-.-
T Consensus 49 il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~-----~~-~---~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~ 119 (1230)
T 1u6g_C 49 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKV-----KE-Y---QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPP 119 (1230)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS-----CH-H---HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC-----CH-H---HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCC
Confidence 4556666777778889998888888776521 11 2 2367888888886443 3333344444444422100
Q ss_pred -------HHHHhcchhhhhhhhhcc-CCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhh
Q 017213 158 -------ARYVLESQHMKKFFDYIQ-LPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRR 229 (375)
Q Consensus 158 -------a~~iL~s~~~~~fF~yi~-~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkR 229 (375)
.. -.....+-.+++.++ .++.++...|+.++.+++....+.+.. .++.+...+- .++.+++--.|+
T Consensus 120 ~~~~~~~~~-~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~----~~~~ll~~l~-~~L~~~~~~vR~ 193 (1230)
T 1u6g_C 120 ASSGSALAA-NVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVN----FHPSILTCLL-PQLTSPRLAVRK 193 (1230)
T ss_dssp ----CCTHH-HHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTT----THHHHHHHHG-GGGGCSSHHHHH
T ss_pred cccccchHH-HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHH----HHHHHHHHHH-HHHcCCcHHHHH
Confidence 00 001123445666666 588999999999999998754433322 3455666664 677888888888
Q ss_pred hhHHHHHHHhccc
Q 017213 230 QAVKLLGDILLDR 242 (375)
Q Consensus 230 QslKLLgelLldr 242 (375)
++++.||.+....
T Consensus 194 ~a~~al~~l~~~~ 206 (1230)
T 1u6g_C 194 RTIIALGHLVMSC 206 (1230)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhc
Confidence 9999888887543
No 33
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=75.34 E-value=55 Score=30.81 Aligned_cols=155 Identities=12% Similarity=0.099 Sum_probs=102.5
Q ss_pred hhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHh---ccCchhhHhHHHHHHHHHH
Q 017213 77 RENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAG---YENTDMALHYGAMLRECIR 153 (375)
Q Consensus 77 ~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~g---Ye~~dial~~G~mLRecir 153 (375)
..+.+..|+..|..=+-+.|..+.....++-+.. +...-+...++.+..|+.. -+++++-..+-..|+.+.+
T Consensus 15 ~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-----~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~ 89 (529)
T 1jdh_A 15 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp --CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-----HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred hHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-----ccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 3455666666666667777888888777776432 1122333344444444332 2467788888888999888
Q ss_pred HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHH
Q 017213 154 HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVK 233 (375)
Q Consensus 154 ~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslK 233 (375)
++.....+.....+..+.+.++.++-++-..|..++..+...+......+...+ .....- .++.+++--.+..+..
T Consensus 90 ~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g---~i~~L~-~ll~~~~~~~~~~~~~ 165 (529)
T 1jdh_A 90 HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAG---GLQKMV-ALLNKTNVKFLAITTD 165 (529)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHT---HHHHHH-HGGGCCCHHHHHHHHH
T ss_pred CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcC---CHHHHH-HHHhcCCHHHHHHHHH
Confidence 888777788888889999999999989999999999998776543333333322 233443 6777777666666677
Q ss_pred HHHHHhc
Q 017213 234 LLGDILL 240 (375)
Q Consensus 234 LLgelLl 240 (375)
.|+.+-.
T Consensus 166 ~L~~la~ 172 (529)
T 1jdh_A 166 CLQILAY 172 (529)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 7776654
No 34
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=74.31 E-value=12 Score=36.69 Aligned_cols=58 Identities=17% Similarity=0.181 Sum_probs=46.4
Q ss_pred HHHHH-HHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhh-chhHHHHHHHh
Q 017213 69 AQLTA-EFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEA-NIDLLDILIAG 134 (375)
Q Consensus 69 ~qLa~-e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~-~~~il~~L~~g 134 (375)
.+|+. + -++|..|+ |...++.+-|..++.|.+.+||.. .|+++++.+ +|..++.++..
T Consensus 63 ~KI~~~e---f~lL~nL~-~~~~~~~~~rE~aarII~ssLRNN----P~Al~~V~~~~p~fv~~lf~~ 122 (315)
T 3qml_C 63 YKIITHE---FALLANLS-LNENLPLTLRELSTRVITSCLRNN----PPVVEFINESFPNFKSKIMAA 122 (315)
T ss_dssp HHHHHHH---HHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTC----HHHHHHHHHHCTTHHHHHHHH
T ss_pred hHHHhCc---HHHHHHHH-hhccCChhHHHHHHHHHHHHHccC----HHHHHHHHHhChhHHHHHHHH
Confidence 44554 4 26788888 767799999999999999999944 688999987 69999999854
No 35
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=74.30 E-value=76 Score=31.93 Aligned_cols=152 Identities=10% Similarity=0.150 Sum_probs=93.6
Q ss_pred chHHHHHHhCCCC--ChhhhhhHHHHHHHHhhhcccCccchhHHhhhc-hhHHHHHHHhccCc----hhhHhHHHHHHHH
Q 017213 79 NTLRLLITCLPKL--NLEARKDATQVVANLQRQQVHSKLIASDYLEAN-IDLLDILIAGYENT----DMALHYGAMLREC 151 (375)
Q Consensus 79 d~l~~Li~~l~~L--~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~-~~il~~L~~gYe~~----dial~~G~mLRec 151 (375)
+++..|+.++..= +.+.|+.+..++..+...-. .+.+..+ +.++..+..+..++ ++-..+-..|..+
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~------~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~ 201 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDID------PEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS 201 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC------HHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcC------HhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 4677777777665 67788888888888876421 1223443 78888888877654 3333333444444
Q ss_pred HHH--HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhh
Q 017213 152 IRH--QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRR 229 (375)
Q Consensus 152 ir~--e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkR 229 (375)
+.+ ..+......+..+..+++.++.++.++..-|+..+..+...+++....++.. .++.-.- ..+.+.+--+++
T Consensus 202 ~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~---~l~~~~~-~~~~~~~~~v~~ 277 (876)
T 1qgr_A 202 LEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP---ALFAITI-EAMKSDIDEVAL 277 (876)
T ss_dssp GGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTT---THHHHHH-HHHTCSSHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHH-HHhcCCchHHHH
Confidence 332 0110000001123334456677888999999999999999998877766652 2333332 345566667788
Q ss_pred hhHHHHHHHhc
Q 017213 230 QAVKLLGDILL 240 (375)
Q Consensus 230 QslKLLgelLl 240 (375)
+++.+++.+.-
T Consensus 278 ~al~~l~~l~~ 288 (876)
T 1qgr_A 278 QGIEFWSNVCD 288 (876)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887764
No 36
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=72.37 E-value=70 Score=33.43 Aligned_cols=160 Identities=16% Similarity=0.111 Sum_probs=107.0
Q ss_pred HHHhhchHHHHHHhCCCCC-hhhhhhHHHHHHHHhhhcccCccchhHHhhh-c--hhHHHHHHHhc--------------
Q 017213 74 EFFRENTLRLLITCLPKLN-LEARKDATQVVANLQRQQVHSKLIASDYLEA-N--IDLLDILIAGY-------------- 135 (375)
Q Consensus 74 e~~~~d~l~~Li~~l~~L~-fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~-~--~~il~~L~~gY-------------- 135 (375)
.+...+.+..|+..|..=+ .+.|+.++.+..|+-+... ....+.. . |.++..|-.+.
T Consensus 483 ~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~-----~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq 557 (780)
T 2z6g_A 483 AVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA-----NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQ 557 (780)
T ss_dssp HHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHH-----HHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccc
Confidence 3445567788888777655 4788999998888875221 1122222 1 44444444332
Q ss_pred ------cCchhhHhHHHHHHHHHHHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHH
Q 017213 136 ------ENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYD 209 (375)
Q Consensus 136 ------e~~dial~~G~mLRecir~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd 209 (375)
...++...+...|+.|.+++.....+.....+..+.+.+..++-+|..-|...+..+. .++.....+....
T Consensus 558 ~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~-~~~~~~~~i~~~g-- 634 (780)
T 2z6g_A 558 QFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEG-- 634 (780)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTT--
T ss_pred hhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHCC--
Confidence 1133444555667777777776666767778889999999999999888888888775 4444443333322
Q ss_pred HHHHHHHHhhccCCCcchhhhhHHHHHHHhcccc
Q 017213 210 WFFAEYNSKLLESSNYITRRQAVKLLGDILLDRS 243 (375)
Q Consensus 210 ~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~ 243 (375)
..... .+|+.++|--.|+.|+..|+.+..++.
T Consensus 635 -~i~~L-~~Ll~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 635 -ATAPL-TELLHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp -CHHHH-HHGGGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred -CHHHH-HHHHcCCCHHHHHHHHHHHHHHHcCCh
Confidence 22334 379999999999999999999998887
No 37
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=71.54 E-value=50 Score=35.72 Aligned_cols=184 Identities=16% Similarity=0.141 Sum_probs=118.8
Q ss_pred HHHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCc-hhh--HhHHHHH
Q 017213 72 TAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT-DMA--LHYGAML 148 (375)
Q Consensus 72 a~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~-dia--l~~G~mL 148 (375)
...+.+.+.+..|+..|..=+.+.|+.++...+++...... ......+- -.+.+.-|+.--... +.. ..+=.-|
T Consensus 529 r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p-~~~~~~~~--~~~aIppLv~LL~~~~~~l~~~eAl~AL 605 (810)
T 3now_A 529 RGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINP-EVSFSGQR--SLDVIRPLLNLLQQDCTALENFESLMAL 605 (810)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCH-HHHTTTHH--HHHTHHHHHHTTSTTSCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCCh-hhhhcchh--hhcHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 34466778888888888777889999999998888763211 00000010 012233333222211 111 1122234
Q ss_pred HHHHHH-HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcch
Q 017213 149 RECIRH-QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYIT 227 (375)
Q Consensus 149 Recir~-e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVT 227 (375)
+-+..+ +.....+.+...+..+.+++..++-.|-.-|..++..+.+ ++.....|.. +.+ -....- +|+.+++.-+
T Consensus 606 ~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~-~~~~~~~~v~-~~g-~l~~Lv-~LL~s~d~~v 681 (810)
T 3now_A 606 TNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM-SEDVIKMFEG-NND-RVKFLA-LLCEDEDEET 681 (810)
T ss_dssp HHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT-SHHHHHHHHS-SSS-HHHHHH-HGGGCSSHHH
T ss_pred HHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhC-ChHHHHHHHh-ccC-cHHHHH-HHhcCCCHHH
Confidence 555554 5667778887778888888888899999999999988765 6777677763 222 233443 7999999999
Q ss_pred hhhhHHHHHHHhc-cccchHHHHHhhcC-hhhHHHHHHHhh
Q 017213 228 RRQAVKLLGDILL-DRSNSVVMTRYVSS-RENLRILMNLLR 266 (375)
Q Consensus 228 kRQslKLLgelLl-dr~N~~vM~rYis~-~~NLkl~M~lL~ 266 (375)
|+.|.-.|+.|-. ++.+ .++|-+ ..-+..+..||+
T Consensus 682 q~~Aa~ALanLt~~s~~~----~~~ii~~~g~I~~Lv~LL~ 718 (810)
T 3now_A 682 ATACAGALAIITSVSVKC----CEKILAIASWLDILHTLIA 718 (810)
T ss_dssp HHHHHHHHHHHHHHCHHH----HHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHH----HHHHHHHcCCHHHHHHHHC
Confidence 9999999999986 3333 234444 778888999999
No 38
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=71.45 E-value=89 Score=31.45 Aligned_cols=114 Identities=10% Similarity=0.077 Sum_probs=59.0
Q ss_pred chhHHHHHHHhccCc--hhhHhHHH--HHHHHHHH---HHHHHHHhcchhhhhhhhhccCC--ChhhhhhHHHHHHHHHh
Q 017213 124 NIDLLDILIAGYENT--DMALHYGA--MLRECIRH---QSVARYVLESQHMKKFFDYIQLP--NFDIAADAAATFKELLT 194 (375)
Q Consensus 124 ~~~il~~L~~gYe~~--dial~~G~--mLRecir~---e~la~~iL~s~~~~~fF~yi~~~--~FdIasDAf~TfkelLt 194 (375)
.|+++..|+..-.++ +...--|. .|..+++. +.+..++ ...+..+...++.+ +-++...|+..+..++.
T Consensus 126 w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~ 203 (876)
T 1qgr_A 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSLE 203 (876)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGH--HHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGG
T ss_pred cHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCHhhHHhHH--HHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 588888888776655 33222221 12222221 1111000 01122344455555 67888888888887764
Q ss_pred hChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccc
Q 017213 195 RHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDR 242 (375)
Q Consensus 195 ~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr 242 (375)
.-..-....... +.+....- .++.+++.-.|+.+++.|+.++...
T Consensus 204 ~~~~~~~~~~~~--~~il~~l~-~~~~~~~~~vr~~a~~~l~~l~~~~ 248 (876)
T 1qgr_A 204 FTKANFDKESER--HFIMQVVC-EATQCPDTRVRVAALQNLVKIMSLY 248 (876)
T ss_dssp GCHHHHTSHHHH--HHHHHHHH-HHTTCSSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhHHHH--HHHHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 211110000000 12344443 5677778888899999999998543
No 39
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=71.11 E-value=88 Score=31.26 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=104.9
Q ss_pred HhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhc---cCchhhHhHHHHHHHHH
Q 017213 76 FRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGY---ENTDMALHYGAMLRECI 152 (375)
Q Consensus 76 ~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gY---e~~dial~~G~mLReci 152 (375)
+..+.+..|+..|..=+-+.|..+.....++-... ....-+...+.++..|+..- +++++-..+-..|+.+.
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-----THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred hhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCC-----hhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 34556667777666667778888888888776533 12233344455555554443 36677777788889888
Q ss_pred HHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhH
Q 017213 153 RHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAV 232 (375)
Q Consensus 153 r~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQsl 232 (375)
+++.....+.+...+..+.+.++.++-++-..|..++..+...+......+.... .....- .+|.++|--.+..++
T Consensus 86 ~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g---~i~~Lv-~lL~~~~~~~~~~a~ 161 (644)
T 2z6h_A 86 HHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAG---GLQKMV-ALLNKTNVKFLAITT 161 (644)
T ss_dssp TSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---HHHHHH-HGGGCCCHHHHHHHH
T ss_pred cChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCC---ChHHHH-HHHCcCCHHHHHHHH
Confidence 8888777788888889999999999989999999999999876544443333333 233443 677777654555556
Q ss_pred HHHHHHhc
Q 017213 233 KLLGDILL 240 (375)
Q Consensus 233 KLLgelLl 240 (375)
..|+.+-.
T Consensus 162 ~~L~~La~ 169 (644)
T 2z6h_A 162 DCLQILAY 169 (644)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 67776664
No 40
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=69.76 E-value=39 Score=29.16 Aligned_cols=156 Identities=12% Similarity=0.141 Sum_probs=106.3
Q ss_pred HHHHhCC-CCChhhhhhHHHHHHHHhhhcccCccchhHHhhh-chhHHHHHHHhccCc--hhhHhHHHHHHHHHHHHHHH
Q 017213 83 LLITCLP-KLNLEARKDATQVVANLQRQQVHSKLIASDYLEA-NIDLLDILIAGYENT--DMALHYGAMLRECIRHQSVA 158 (375)
Q Consensus 83 ~Li~~l~-~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~-~~~il~~L~~gYe~~--dial~~G~mLRecir~e~la 158 (375)
.|...+. .-+...|+.+...+..+.+.- +. .+.. .+.++..|+....++ .+--.+..-|..|+..-.+.
T Consensus 60 ~L~~~l~kd~~~~V~~~a~~~l~~la~~l-~~------~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~~ 132 (242)
T 2qk2_A 60 ALKKVITKDSNVVLVAMAGKCLALLAKGL-AK------RFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTSLE 132 (242)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHH-GG------GGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHH-hh------hHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 3444443 567778888888888887532 21 1222 377888888888664 45566777777776643321
Q ss_pred HHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhCh-H-HHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHH
Q 017213 159 RYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHK-S-TVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLG 236 (375)
Q Consensus 159 ~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk-~-~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLg 236 (375)
..+..+..+++.++..+-..+...+..++.+|. . ....+ ++.+....- .+++.+++-.|..|...||
T Consensus 133 ------~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~----l~~l~p~l~-~~l~D~~~~VR~~A~~~l~ 201 (242)
T 2qk2_A 133 ------AQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKL----LKLLTTSLV-KTLNEPDPTVRDSSAEALG 201 (242)
T ss_dssp ------HHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHH----HHHHHHHHH-HHHTSSCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHH----HHHHHHHHH-HHhcCCChHHHHHHHHHHH
Confidence 234556777888899999999999999999884 3 23333 455666663 8899999999999999999
Q ss_pred HHhccccchHHHHHhhcChhh
Q 017213 237 DILLDRSNSVVMTRYVSSREN 257 (375)
Q Consensus 237 elLldr~N~~vM~rYis~~~N 257 (375)
.+..-=. ...+..|+.+-+.
T Consensus 202 ~l~~~vg-~~~~~~~l~~L~~ 221 (242)
T 2qk2_A 202 TLIKLMG-DKAVTPLLADVDP 221 (242)
T ss_dssp HHHHHHC-HHHHGGGGTTSCH
T ss_pred HHHHHcC-HHHHHHHHHhcCH
Confidence 9874333 3456677765443
No 41
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=69.45 E-value=67 Score=31.72 Aligned_cols=138 Identities=14% Similarity=0.235 Sum_probs=101.8
Q ss_pred HHHHHHhhchHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCch-------hhHh
Q 017213 71 LTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTD-------MALH 143 (375)
Q Consensus 71 La~e~~~~d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~d-------ial~ 143 (375)
+|.-+..++.+..+...+..=.||.--|+-..|.-|+-+. +..+.+||.+|-|.+.....+-=..+ .-=.
T Consensus 156 la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~H---k~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKL 232 (341)
T 1upk_A 156 LAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRH---KLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKL 232 (341)
T ss_dssp HHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSS---HHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcc---HHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHH
Confidence 3333444445556777788889999999999999998753 34667999999887665544432222 3334
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhh--ChHHHHHHHHhhHHHH
Q 017213 144 YGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTR--HKSTVAEFLSKNYDWF 211 (375)
Q Consensus 144 ~G~mLRecir~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~--Hk~~vaeFl~~Nyd~F 211 (375)
.|.+|-+=.-+..+.+||-+.++++-+...+..+.=-|.-+||..||--..+ -+.-|...|.+|=++.
T Consensus 233 LgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kL 302 (341)
T 1upk_A 233 LGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKL 302 (341)
T ss_dssp HHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHH
T ss_pred HHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHH
Confidence 5777777667788899999989999999999999999999999999976552 2356778888887653
No 42
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=65.60 E-value=63 Score=32.27 Aligned_cols=137 Identities=18% Similarity=0.251 Sum_probs=81.9
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHH----HHHHhccCchhhHhHHHHHHHH--HH
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLD----ILIAGYENTDMALHYGAMLREC--IR 153 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~----~L~~gYe~~dial~~G~mLRec--ir 153 (375)
.+..++..++.=+++.||-+..-...+.+ .+||.+. .+.+.-.+++-..- |.-||-. +.
T Consensus 50 ~~~~vi~l~~s~~~~~Krl~yl~l~~~~~--------------~~~e~~~l~~n~l~kdL~~~n~~ir-~~AL~~L~~i~ 114 (591)
T 2vgl_B 50 LFPDVVNCMQTDNLELKKLVYLYLMNYAK--------------SQPDMAIMAVNSFVKDCEDPNPLIR-ALAVRTMGCIR 114 (591)
T ss_dssp GHHHHHHTTSSSCHHHHHHHHHHHHHHHH--------------HSHHHHHTTHHHHGGGSSSSSHHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHcc--------------cCchHHHHHHHHHHHHcCCCCHHHH-HHHHHHHHcCC
Confidence 34556667777788888777665555433 2344432 33333444433222 2223332 23
Q ss_pred HHHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHH
Q 017213 154 HQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVK 233 (375)
Q Consensus 154 ~e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslK 233 (375)
.+.+++++.. .+...+..++-.|-.-|...+-.+....++++-+ ..++.... .+|.++|...++.|+.
T Consensus 115 ~~~~~~~l~~-----~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~------~~~~~~l~-~lL~d~d~~V~~~A~~ 182 (591)
T 2vgl_B 115 VDKITEYLCE-----PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVED------QGFLDSLR-DLIADSNPMVVANAVA 182 (591)
T ss_dssp SGGGHHHHHH-----HHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHH------HHHHHHHH-HTTSCSCHHHHHHHHH
T ss_pred hHHHHHHHHH-----HHHHHcCCCChHHHHHHHHHHHHHHhhChhhccc------ccHHHHHH-HHhCCCChhHHHHHHH
Confidence 3334443321 2333445667777777777777776666665532 35667775 8999999999999999
Q ss_pred HHHHHhcccc
Q 017213 234 LLGDILLDRS 243 (375)
Q Consensus 234 LLgelLldr~ 243 (375)
.|+++--+..
T Consensus 183 aL~~i~~~~~ 192 (591)
T 2vgl_B 183 ALSEISESHP 192 (591)
T ss_dssp HHHHHTTSCC
T ss_pred HHHHHHhhCC
Confidence 9999987654
No 43
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=65.09 E-value=1.5e+02 Score=31.63 Aligned_cols=158 Identities=16% Similarity=0.247 Sum_probs=95.4
Q ss_pred hHHHHHhhhccCCCCC-------CchHHHHHHHHHHHhh-chHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchh
Q 017213 47 NIRELKSILYGNSESE-------PVSEACAQLTAEFFRE-NTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIAS 118 (375)
Q Consensus 47 ~L~~mK~il~G~~e~e-------p~~e~~~qLa~e~~~~-d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v 118 (375)
.|.-+-.++.++++.+ ...+...++|.++.+. +-+..|+..|..=+|..|--+.++...|+..+.. -.=
T Consensus 82 ~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~---~~Q 158 (651)
T 3grl_A 82 ALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGP---QVQ 158 (651)
T ss_dssp HHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHH---HHH
T ss_pred HHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcH---HHH
Confidence 3445555666555432 1123346777777544 7899999999999999999999999999975422 134
Q ss_pred HHhhhchhHHHHHHHhccCc-hhhHhHHH-HHHHHHHH-HHHHHHHhcchhhhhhhhhccCCCh----hhhhhHHHHHHH
Q 017213 119 DYLEANIDLLDILIAGYENT-DMALHYGA-MLRECIRH-QSVARYVLESQHMKKFFDYIQLPNF----DIAADAAATFKE 191 (375)
Q Consensus 119 ~Yl~~~~~il~~L~~gYe~~-dial~~G~-mLRecir~-e~la~~iL~s~~~~~fF~yi~~~~F----dIasDAf~Tfke 191 (375)
+++...|.-+..|+.--+++ |+.=+-+. +|-+..++ +.+-+.+=.-.-|.++|+-++...- .|..|++.....
T Consensus 159 ~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~n 238 (651)
T 3grl_A 159 QIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQN 238 (651)
T ss_dssp HHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHH
T ss_pred HHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHH
Confidence 67777888888887766644 22211111 12222222 2233333232457777877766554 677888888888
Q ss_pred HHhhChHHHHHHHHhh
Q 017213 192 LLTRHKSTVAEFLSKN 207 (375)
Q Consensus 192 lLt~Hk~~vaeFl~~N 207 (375)
||..+.+.=.-|.+.+
T Consensus 239 LLr~N~sNQ~~FrEt~ 254 (651)
T 3grl_A 239 LLKNNNSNQNFFKEGS 254 (651)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHhcCHHHHHHHHHcC
Confidence 8887764433344333
No 44
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=59.41 E-value=74 Score=29.08 Aligned_cols=94 Identities=5% Similarity=-0.041 Sum_probs=59.0
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHHhcchhhhhhhhhccCC--ChhhhhhHHHHHHHHHhhC-hHHHHHHHHhhHHHHHHH
Q 017213 138 TDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLP--NFDIAADAAATFKELLTRH-KSTVAEFLSKNYDWFFAE 214 (375)
Q Consensus 138 ~dial~~G~mLRecir~e~la~~iL~s~~~~~fF~yi~~~--~FdIasDAf~TfkelLt~H-k~~vaeFl~~Nyd~Ff~~ 214 (375)
+.+ -..+..|-+..+++.-.. -..+.+..+++.++.+ +.++---|+.++..+.... +. .+..+.+.++..
T Consensus 104 ~~v-~~~~~~i~~ia~~~~~~~--~w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~----~~~~~~~~ll~~ 176 (462)
T 1ibr_B 104 YRP-SSASQCVAGIACAEIPVN--QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPE----QLQDKSNEILTA 176 (462)
T ss_dssp SSS-CSHHHHHHHHHHHHGGGT--CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGG----GTGGGHHHHHHH
T ss_pred chh-hHHHHHHHHHHHHhcccc--ccHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCch----hhHhHHHHHHHH
Confidence 444 555555555555531100 0122344555666666 7777778888888887654 22 244555667777
Q ss_pred HHHhhccCC--CcchhhhhHHHHHHHh
Q 017213 215 YNSKLLESS--NYITRRQAVKLLGDIL 239 (375)
Q Consensus 215 yn~~Ll~s~--NYVTkRQslKLLgelL 239 (375)
+. +++.++ +--.|..+++-|+.++
T Consensus 177 l~-~~l~~~~~~~~vr~~a~~~l~~~~ 202 (462)
T 1ibr_B 177 II-QGMRKEEPSNNVKLAATNALLNSL 202 (462)
T ss_dssp HH-HHHSTTCCCHHHHHHHHHHHHHHT
T ss_pred HH-HHhCCCCCCHHHHHHHHHHHHHHH
Confidence 75 777777 7788999999999875
No 45
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=58.38 E-value=95 Score=29.41 Aligned_cols=142 Identities=10% Similarity=0.146 Sum_probs=84.4
Q ss_pred hhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchHH
Q 017213 168 KKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVV 247 (375)
Q Consensus 168 ~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~v 247 (375)
-.++.+++.++-+|-..|..++..+...... ++. .+.+..... .++.++||-+|..++..+|.+...=.. .
T Consensus 444 ~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~---~~~---~~~llp~l~-~~~~~~~~~~R~~a~~~l~~l~~~~~~-~- 514 (588)
T 1b3u_A 444 SLCMAWLVDHVYAIREAATSNLKKLVEKFGK---EWA---HATIIPKVL-AMSGDPNYLHRMTTLFCINVLSEVCGQ-D- 514 (588)
T ss_dssp HHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH---HHH---HHHTHHHHH-HTTTCSCHHHHHHHHHHHHHHHHHHHH-H-
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHhCc---hhH---HHHHHHHHH-HHhhCCCHHHHHHHHHHHHHHHHhcCH-H-
Confidence 3445567778888888888888887765432 221 344555554 678899999999999999998631000 0
Q ss_pred HHHhhcChhhHHHHHHHhhhhccCCcchhHHHHHHHhhhcCCCcccccccccccCCCcccchhhheeeeeeeecCCCChh
Q 017213 248 MTRYVSSRENLRILMNLLRVRYFPRMHVEDIFYLAYQKLQGTEPVTFDKISLHMESSKSIQIEAFHVFKLFAANQNKPPD 327 (375)
Q Consensus 248 M~rYis~~~NLkl~M~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~Iq~EAFhvFKvFvANp~K~~~ 327 (375)
.| -+.-+..++.+|+ |+..+++..|...+.-++..=. +.
T Consensus 515 --~~--~~~~~~~l~~~l~-----------------------------------d~~~~Vr~~a~~~l~~l~~~~~--~~ 553 (588)
T 1b3u_A 515 --IT--TKHMLPTVLRMAG-----------------------------------DPVANVRFNVAKSLQKIGPILD--NS 553 (588)
T ss_dssp --HH--HHHTHHHHHHGGG-----------------------------------CSCHHHHHHHHHHHHHHGGGSC--HH
T ss_pred --HH--HHHHHHHHHhhCC-----------------------------------CCCchHHHHHHHHHHHHHHHhc--hh
Confidence 01 1244556666677 8888888887777665543211 11
Q ss_pred HHHHHHHhHHHHHHHHhhCCCCCcccchHHHHHHHHHHHhcC
Q 017213 328 IVSILVANRSKLLRLFADFKTDKEDEQFEADKAQVVKEIAGL 369 (375)
Q Consensus 328 I~~IL~~Nr~kLl~fl~~f~~d~~DeqF~~EK~~lI~~I~~L 369 (375)
. + .+.++..+....+|++. +-+......+..+
T Consensus 554 ~---~---~~~~~p~l~~l~~d~d~----~vr~~a~~al~~l 585 (588)
T 1b3u_A 554 T---L---QSEVKPILEKLTQDQDV----DVKYFAQEALTVL 585 (588)
T ss_dssp H---H---HHHHHHHHHHHTTCSSH----HHHHHHHHHHHHT
T ss_pred h---h---HHHHHHHHHHHcCCCch----hHHHHHHHHHHHh
Confidence 1 1 14555556565554421 3444444444444
No 46
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=58.35 E-value=1.1e+02 Score=31.22 Aligned_cols=196 Identities=12% Similarity=0.123 Sum_probs=101.7
Q ss_pred HHHHHHHHHhhccCCchhhhhHHHHHHHHHhHHHHHhhhccCCCCCC--chHHHHHHHHHHH-hhc---hHHHHHHhCCC
Q 017213 17 RQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEP--VSEACAQLTAEFF-REN---TLRLLITCLPK 90 (375)
Q Consensus 17 r~l~e~l~~L~~~~~~~~~K~e~k~eeisK~L~~mK~il~G~~e~ep--~~e~~~qLa~e~~-~~d---~l~~Li~~l~~ 90 (375)
|.+++.+..+..... +.++ ..-+.+-+.++|.-+-++...++ -.+++..|..-.. ..| .+...+.+++.
T Consensus 11 ~~l~~~I~~ir~~~~----~~~e-~~~i~~E~~~ir~~~~~~~~~~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl~~s 85 (621)
T 2vgl_A 11 RGLAVFISDIRNCKS----KEAE-IKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSS 85 (621)
T ss_dssp HHHHHHHHHHHHCSS----HHHH-HHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHGGGC
T ss_pred hhHHHHHHHHHcCCC----HHHH-HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHhcC
Confidence 566666665554321 1111 23588889999999976332111 1233333333222 222 46777788888
Q ss_pred CChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHH----HHhccCchhhHhHHHHHHH--HHHHHHHHHHHhcc
Q 017213 91 LNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDIL----IAGYENTDMALHYGAMLRE--CIRHQSVARYVLES 164 (375)
Q Consensus 91 L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L----~~gYe~~dial~~G~mLRe--cir~e~la~~iL~s 164 (375)
=+++.||-+..-...+. ..+||++... .+...+++- +.-|.-||- +|+.+.+++.++..
T Consensus 86 ~~~~~Krl~YL~l~~~~--------------~~~~e~~~L~iN~l~kDl~~~n~-~ir~lALr~L~~i~~~e~~~~l~~~ 150 (621)
T 2vgl_A 86 NRYTEKQIGYLFISVLV--------------NSNSELIRLINNAIKNDLASRNP-TFMGLALHCIANVGSREMAEAFAGE 150 (621)
T ss_dssp SCHHHHHHHHHHHHHSC--------------CCCHHHHHHHHHHHHHHHHSCCH-HHHHHHHHHHHHHCCHHHHHHHTTH
T ss_pred CCHHHHHHHHHHHHHHc--------------cCCcHHHHHHHHHHHHhcCCCCH-HHHHHHHHHhhccCCHHHHHHHHHH
Confidence 88888876665544433 3345654333 333333332 223344443 34556666655422
Q ss_pred hhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccc
Q 017213 165 QHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDR 242 (375)
Q Consensus 165 ~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr 242 (375)
+.+...- ..++=-|-.-|.-..-.+....++++- ++.|+.... +||..+|.-.+.-++-+|+++..++
T Consensus 151 --v~~~l~~-~d~~~~VRK~A~~al~kl~~~~p~~~~------~~~~~~~l~-~lL~d~d~~V~~~a~~~l~~i~~~~ 218 (621)
T 2vgl_A 151 --IPKILVA-GDTMDSVKQSAALCLLRLYRTSPDLVP------MGDWTSRVV-HLLNDQHLGVVTAATSLITTLAQKN 218 (621)
T ss_dssp --HHHHHHC-SSSCHHHHHHHHHHHHHHHHHCGGGCC------CCSCHHHHH-HHTTCSCHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHhC-CCCCHHHHHHHHHHHHHHHHhChhhcC------chhHHHHHH-HHhCCCCccHHHHHHHHHHHHHHhC
Confidence 2221100 223334434444444444444555442 123455664 7888888888888888888887544
No 47
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=57.90 E-value=1.6e+02 Score=29.56 Aligned_cols=158 Identities=14% Similarity=0.185 Sum_probs=89.7
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhcc--CchhhHhHHHHHHHHHHHHHH
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYE--NTDMALHYGAMLRECIRHQSV 157 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe--~~dial~~G~mLRecir~e~l 157 (375)
++..|...+..-+.+.|+.+..++..+....... ...|+. ++++..++.+-. ++++...+-..+..+++...-
T Consensus 225 ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~---~~~~l~--~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 299 (861)
T 2bpt_A 225 LMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTF---MKPYME--QALYALTIATMKSPNDKVASMTVEFWSTICEEEID 299 (861)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGG---CHHHHH--HTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHH--HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4555555556667888988888888877644210 112332 167777766654 345666666666666655321
Q ss_pred ------------------HHHHhcchhhhhhhhhccC-------CChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHH
Q 017213 158 ------------------ARYVLESQHMKKFFDYIQL-------PNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFF 212 (375)
Q Consensus 158 ------------------a~~iL~s~~~~~fF~yi~~-------~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff 212 (375)
.+-.+ ...+..++..+.- ..+.+...|..++..+-..-.. .-...+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~-~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~-------~~~~~l~ 371 (861)
T 2bpt_A 300 IAYELAQFPQSPLQSYNFALSSI-KDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGN-------HILEPVL 371 (861)
T ss_dssp HHHHHHHCTTCSCCCCCHHHHHH-HHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGG-------GGHHHHH
T ss_pred hhhhhhhccCCchhhHHHHHHHH-HHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccH-------hHHHHHH
Confidence 11111 2223334444432 2466666677776665443221 1233455
Q ss_pred HHHHHhhccCCCcchhhhhHHHHHHHhccccchHHHHHhh
Q 017213 213 AEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYV 252 (375)
Q Consensus 213 ~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~vM~rYi 252 (375)
.... .++.+++.-.|..++..||.+...-. ...+..|+
T Consensus 372 ~~l~-~~l~~~~~~~r~~a~~~l~~i~~~~~-~~~~~~~l 409 (861)
T 2bpt_A 372 EFVE-QNITADNWRNREAAVMAFGSIMDGPD-KVQRTYYV 409 (861)
T ss_dssp HHHH-HHTTCSSHHHHHHHHHHHHHTSSSSC-HHHHHHHH
T ss_pred HHHH-HHcCCCChhHHHHHHHHHHHHHcCCC-HHHHHHHH
Confidence 5554 77889999999999999999984322 23444554
No 48
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=53.01 E-value=2.1e+02 Score=29.61 Aligned_cols=124 Identities=10% Similarity=0.028 Sum_probs=73.6
Q ss_pred hhHHHHHHHhccCc---hhhHhHHHHHHHHHHHH----HHHHHHhcchhhhhhhhhcc-C--CChhhhhhHHHHHHHHHh
Q 017213 125 IDLLDILIAGYENT---DMALHYGAMLRECIRHQ----SVARYVLESQHMKKFFDYIQ-L--PNFDIAADAAATFKELLT 194 (375)
Q Consensus 125 ~~il~~L~~gYe~~---dial~~G~mLRecir~e----~la~~iL~s~~~~~fF~yi~-~--~~FdIasDAf~TfkelLt 194 (375)
|.++..++.+|.+. ..--..|.+++++-..+ .+.. ++. ..+...+.-++ . ..=|+..++|.-+..++.
T Consensus 725 ~~~~~~l~~~~~~~~~~~~l~l~~~li~~f~~~~~~~~~~~~-~l~-~~~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~ 802 (963)
T 2x19_B 725 PQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEA-LFL-LVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALK 802 (963)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHTTCTTTCHHHHH-HHH-HHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHhCCCcchHHHHHH-HHH-HHHHHHHHHHhhCcccCchHHHHHHHHHHHHHH
Confidence 67788888888652 33334555555432222 1111 111 11222222121 1 234788889999999998
Q ss_pred hChHHHHHHHHhh-HHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchHHHHHhhc
Q 017213 195 RHKSTVAEFLSKN-YDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVS 253 (375)
Q Consensus 195 ~Hk~~vaeFl~~N-yd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~vM~rYis 253 (375)
.++..+-. ... ++.++...- ..+.+.+.-+.+.++..|.+++..-.+......++.
T Consensus 803 ~~~~~~~~--~~~~~~~i~~~~~-~~l~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~ 859 (963)
T 2x19_B 803 RKPDLFLC--ERLDVKAVFQCAV-LALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQ 859 (963)
T ss_dssp HCGGGGGC--TTSCHHHHHHHHH-HHTTCSCHHHHHHHHHHHHHHGGGTTSSCHHHHHTT
T ss_pred hCcHHHcC--CcccHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 88866521 222 667777764 677889999999999999999975433334444444
No 49
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=50.93 E-value=97 Score=34.51 Aligned_cols=79 Identities=14% Similarity=0.147 Sum_probs=58.0
Q ss_pred cCchhhHhHHHHHHHHHHHHHHHHHHhc--chhhhhhhhhc----cCCChhhhhhHHHHHHHHHhh---ChHHHHHHHHh
Q 017213 136 ENTDMALHYGAMLRECIRHQSVARYVLE--SQHMKKFFDYI----QLPNFDIAADAAATFKELLTR---HKSTVAEFLSK 206 (375)
Q Consensus 136 e~~dial~~G~mLRecir~e~la~~iL~--s~~~~~fF~yi----~~~~FdIasDAf~TfkelLt~---Hk~~vaeFl~~ 206 (375)
+.||.-...=..||.+..|=. ..+|. ++.|..+++-+ +.++-+|+.-+..++.+++.+ +...+.+|...
T Consensus 842 ~~Pe~r~~ff~ll~~~~~~~f--~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~~~~~~~F~~~ 919 (1073)
T 3gjx_A 842 EYPEHRTNFFLLLQAVNSHCF--PAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQT 919 (1073)
T ss_dssp SCHHHHHHHHHHHHHHHHHCG--GGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHh--HHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Confidence 467777777778888887722 22333 45667777644 689999999999999999975 55677788888
Q ss_pred hHHHHHHHHH
Q 017213 207 NYDWFFAEYN 216 (375)
Q Consensus 207 Nyd~Ff~~yn 216 (375)
.|-.+..+.-
T Consensus 920 ~~~~~~~~i~ 929 (1073)
T 3gjx_A 920 YFCDILQHIF 929 (1073)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888766543
No 50
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=50.43 E-value=1.1e+02 Score=25.37 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=76.2
Q ss_pred chHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhHhHHHHHHHHHHHHHHH
Q 017213 79 NTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVA 158 (375)
Q Consensus 79 d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~mLRecir~e~la 158 (375)
+.+..|+..|..=+.+.|..+......+- .++.+..|+....+++-..-...+ ..++
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~----------------~~~~~~~L~~~l~~~~~~vr~~a~-------~aL~ 106 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIG----------------DERAVEPLIKALKDEDGWVRQSAA-------VALG 106 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHC----------------CGGGHHHHHHHTTCSSHHHHHHHH-------HHHH
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhC----------------CHHHHHHHHHHHcCCCHHHHHHHH-------HHHH
Confidence 45566666666666667766655544331 244455555555444322111110 1111
Q ss_pred HHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHH
Q 017213 159 RYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDI 238 (375)
Q Consensus 159 ~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgel 238 (375)
+ +-..+.+..+.+.+..++-+|-..|...+..+ .++..+ ...- .++.+++.-+|+.++.-||.+
T Consensus 107 ~-~~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~--~~~~~~------------~~L~-~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 107 Q-IGDERAVEPLIKALKDEDWFVRIAAAFALGEI--GDERAV------------EPLI-KALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp H-HCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH--CCGGGH------------HHHH-HHTTCSSHHHHHHHHHHHHHH
T ss_pred H-hCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHc--CCHHHH------------HHHH-HHHcCCCHHHHHHHHHHHHHh
Confidence 1 11122444555566677778877777777665 222222 2232 677888888999999999887
Q ss_pred hccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 239 LLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 239 Lldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
.+++-+..+..+|.
T Consensus 171 --------------~~~~~~~~L~~~l~ 184 (211)
T 3ltm_A 171 --------------GGERVRAAMEKLAE 184 (211)
T ss_dssp --------------CSHHHHHHHHHHHH
T ss_pred --------------CchhHHHHHHHHHh
Confidence 35677777777777
No 51
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=47.86 E-value=2.7e+02 Score=29.32 Aligned_cols=102 Identities=10% Similarity=0.133 Sum_probs=60.2
Q ss_pred CCChhhhhhHHHHHHHHhhhcccC-----ccchhHHhhhchhHHHHHHHhccCchhhHhHHHHHHHHHHHHHHHHHHhcc
Q 017213 90 KLNLEARKDATQVVANLQRQQVHS-----KLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLES 164 (375)
Q Consensus 90 ~L~fE~RKd~~~If~~llr~~~~~-----~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~mLRecir~e~la~~iL~s 164 (375)
..+-+.|--+..++.|.+++.-.. ..|.-+.-.=+..++..|... .+-+.-..|..+...++++--.+ ..
T Consensus 48 ~~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k~~ik~~ll~~l~~~--~~~ir~~l~~~ia~ia~~d~p~~---Wp 122 (960)
T 1wa5_C 48 NLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISL--PNNLQVQIGEAISSIADSDFPDR---WP 122 (960)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSTTT---CT
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhhCccc---hh
Confidence 346778888888888877654321 122111111134566666653 35666677777777666643211 12
Q ss_pred hhhhhhhhhccCCChhhhhhHHHHHHHHHhhC
Q 017213 165 QHMKKFFDYIQLPNFDIAADAAATFKELLTRH 196 (375)
Q Consensus 165 ~~~~~fF~yi~~~~FdIasDAf~TfkelLt~H 196 (375)
+.+..++..++.++...--.|+.++.+++.+.
T Consensus 123 ~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~ 154 (960)
T 1wa5_C 123 TLLSDLASRLSNDDMVTNKGVLTVAHSIFKRW 154 (960)
T ss_dssp THHHHHHTTCCSSCTTHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 34556666777777666667888888887754
No 52
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=45.54 E-value=1.9e+02 Score=28.03 Aligned_cols=136 Identities=14% Similarity=0.190 Sum_probs=75.9
Q ss_pred CCCChHHHHHHHHHHHHHhhccCCchhhhhHHHHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhchHHHHHHh
Q 017213 8 KPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITC 87 (375)
Q Consensus 8 k~KtP~ElVr~l~e~l~~L~~~~~~~~~K~e~k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d~l~~Li~~ 87 (375)
+.++|.++|+.+++.. .+ +.+.+.|..++..|-. .|.+ ..++|...+ +..|+..
T Consensus 64 ~~~sP~~yi~~L~~~~---------~~-------~kl~~~L~sL~v~Lrt----~~~s-----WV~~F~~~G-l~~Ll~i 117 (383)
T 3eg5_B 64 SSRSAMMYIQELRSGL---------RD-------MHLLSCLESLRVSLTS----HPVS-----WVQTFGAEG-LASLLDI 117 (383)
T ss_dssp -CCCHHHHHHHHTTTC---------CH-------HHHHHHHHHHHHHHHH----SCHH-----HHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHHhcc---------cc-------hhHHHHHHHHHHHHhh----CccH-----HHHHHHHcc-HHHHHHH
Confidence 3678999998876421 11 2455778888888752 2333 556665443 3344444
Q ss_pred CCCC-----------ChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhHhHHHHHHHHHHHHH
Q 017213 88 LPKL-----------NLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQS 156 (375)
Q Consensus 88 l~~L-----------~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~mLRecir~e~ 156 (375)
|.++ +.+-.-.+...+..++..+ ...+++.+||+.+..|..+-..+...... . --|-
T Consensus 118 L~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~-----~G~~~vl~~~~~i~~l~~~L~s~~~~~~~------~-aleL 185 (383)
T 3eg5_B 118 LKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNK-----FGIKTMLETEEGILLLVRAMDPAVPNMMI------D-AAKL 185 (383)
T ss_dssp HHHHHTCC-------CHHHHHHHHHHHHHHTSSH-----HHHHHHHTCSSHHHHHHHTCCTTSHHHHH------H-HHHH
T ss_pred HHHHhhccccccchhhHHHHHHHHHHHHHHhcch-----hhHHHHHcChHHHHHHHHHhCCCchHHHH------H-HHHH
Confidence 4322 2222223444445554443 45889999999999999887655442111 1 1123
Q ss_pred HHHHHhcchhhhhhhhhccCCC-hhhhhhHHHHHHH
Q 017213 157 VARYVLESQHMKKFFDYIQLPN-FDIAADAAATFKE 191 (375)
Q Consensus 157 la~~iL~s~~~~~fF~yi~~~~-FdIasDAf~Tfke 191 (375)
|+...+.+. -.+ ++..-+|+..+++
T Consensus 186 L~~lc~~~~----------~~gG~~~VL~Al~~~~~ 211 (383)
T 3eg5_B 186 LSALCILPQ----------PEDMNERVLEAMTERAE 211 (383)
T ss_dssp HHHHHTCCS----------STTHHHHHHHHHHHHHH
T ss_pred HHHHHhCcC----------cCCcHHHHHHHHHHHHH
Confidence 333333321 123 7888888888887
No 53
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=45.39 E-value=2.5e+02 Score=28.24 Aligned_cols=42 Identities=10% Similarity=0.087 Sum_probs=27.7
Q ss_pred hccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHH
Q 017213 173 YIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEY 215 (375)
Q Consensus 173 yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~y 215 (375)
.+.-++-.|.+.|...+.++...+++. .+.+....+.++...
T Consensus 187 lL~D~d~~V~~~Al~~L~~i~~~~~~~-~~~~~~~v~~l~~~L 228 (618)
T 1w63_A 187 LLNEKNHGVLHTSVVLLTEMCERSPDM-LAHFRKLVPQLVRIL 228 (618)
T ss_dssp STTCCCHHHHHHHHHHHHHHCCSHHHH-HHHHHTTHHHHHHHH
T ss_pred HhCCCCHhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHH
Confidence 445678899999999999988766553 333344445555443
No 54
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=43.82 E-value=3.3e+02 Score=29.10 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=54.5
Q ss_pred cCchhhHhHHHHHHHHHHHHHHHHHHhc-ch-hhhhhhh----hccCCChhhhhhHHHHHHHHHhhCh-----HHHHHHH
Q 017213 136 ENTDMALHYGAMLRECIRHQSVARYVLE-SQ-HMKKFFD----YIQLPNFDIAADAAATFKELLTRHK-----STVAEFL 204 (375)
Q Consensus 136 e~~dial~~G~mLRecir~e~la~~iL~-s~-~~~~fF~----yi~~~~FdIasDAf~TfkelLt~Hk-----~~vaeFl 204 (375)
+.||+.-.+=.+|..++++-. ..++. ++ .+..+++ -+..+.-+++.-|...+.++++..+ ..+..|.
T Consensus 816 ~~pd~~~~~f~ll~~i~~~~~--~~l~~~~~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~f~ 893 (1049)
T 3m1i_C 816 EYPEHRVEFYKLLKVINEKSF--AAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFH 893 (1049)
T ss_dssp SSHHHHHHHHHHHHHHHHHCT--HHHHHSCHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHhCH--HHHHcCCHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 467777666555555554321 22332 22 2444443 3467899999999999999988644 3455666
Q ss_pred HhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHh
Q 017213 205 SKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDIL 239 (375)
Q Consensus 205 ~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelL 239 (375)
.+.|-.+....-..|..+. -|-+++...++|
T Consensus 894 ~~~~~~l~~~~~~~l~~~~----h~s~~~~~~~~l 924 (1049)
T 3m1i_C 894 KNYFFIFVSETFFVLTDSD----HKSGFSKQALLL 924 (1049)
T ss_dssp HHHHHHHHHHHHHHHHSTT----CGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcch----HhhhHHHHHHHH
Confidence 5555555444332333333 445555544444
No 55
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=41.52 E-value=1.3e+02 Score=26.77 Aligned_cols=165 Identities=11% Similarity=0.146 Sum_probs=80.9
Q ss_pred CCCChhhhhhHHHHHHH-HhhhcccCccc--hhHHhhhchhHHHHHHHhc-cCchhhHh--HHHHHHHHHHH---HHHH-
Q 017213 89 PKLNLEARKDATQVVAN-LQRQQVHSKLI--ASDYLEANIDLLDILIAGY-ENTDMALH--YGAMLRECIRH---QSVA- 158 (375)
Q Consensus 89 ~~L~fE~RKd~~~If~~-llr~~~~~~~~--~v~Yl~~~~~il~~L~~gY-e~~dial~--~G~mLRecir~---e~la- 158 (375)
..=+|..||.+..-... ++... .+.. ..+ ..++++.|..+- .++++... +...|....++ +.+.
T Consensus 26 ~s~~w~eRk~al~~L~~~~~~~~--~~i~~~~~~----~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~ 99 (249)
T 2qk1_A 26 TSSKWKDRVEALEEFWDSVLSQT--KKLKSTSQN----YSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSK 99 (249)
T ss_dssp TCSSHHHHHHHHHHHHHHTGGGC--CCBCCTTCC----CHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCH
T ss_pred hcCCHHHHHHHHHHHHHHHHhcC--CccccCccc----HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccH
Confidence 45588899998887777 76421 1221 122 257888888777 45554332 22222222210 0011
Q ss_pred HHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHH
Q 017213 159 RYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDI 238 (375)
Q Consensus 159 ~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgel 238 (375)
.|.- ..+-..++.+.-..=.|..-|.++...+...-.. ++.+ .+.+....... ..|.+.|.=+|.+++.+|+.+
T Consensus 100 ~y~~--~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~~~--~~l~~ll~~l~-~~l~~k~~~vk~~al~~l~~~ 173 (249)
T 2qk1_A 100 DYVS--LVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LASS--GRNEDMLKDIL-EHMKHKTPQIRMECTQLFNAS 173 (249)
T ss_dssp HHHH--HHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TCTT--CTTHHHHHHHH-HHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cccC--CcHHHHHHHHH-HHHcCCChHHHHHHHHHHHHH
Confidence 1110 1122334444444333433333333322221100 0000 11344555554 678889999999999999999
Q ss_pred hccccch-HHHHHhhcChhhHHHHHHHhh
Q 017213 239 LLDRSNS-VVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 239 Lldr~N~-~vM~rYis~~~NLkl~M~lL~ 266 (375)
+-.-.-. ..+..|+ ++.-+..++.+|.
T Consensus 174 ~~~~~~~~~~l~~~l-~~~iip~l~~~l~ 201 (249)
T 2qk1_A 174 MKEEKDGYSTLQRYL-KDEVVPIVIQIVN 201 (249)
T ss_dssp HHHCCSCSHHHHHHH-TTTHHHHHHHHHT
T ss_pred HHHcCCcchhHHHHH-HHHHHHHHHHHhc
Confidence 9543221 3444454 2344556666666
No 56
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=41.42 E-value=1.3e+02 Score=29.08 Aligned_cols=116 Identities=17% Similarity=0.163 Sum_probs=77.3
Q ss_pred hhHHHHHHHhccCchhhHhHHHHHHHHHHH-HHHHHHHhcchhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHH
Q 017213 125 IDLLDILIAGYENTDMALHYGAMLRECIRH-QSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEF 203 (375)
Q Consensus 125 ~~il~~L~~gYe~~dial~~G~mLRecir~-e~la~~iL~s~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeF 203 (375)
|.++..|-.+ ++++-..+-..|+....+ +..-..+.+...+..+.+.+..++-++.-.|..++..|...+...-...
T Consensus 5 ~~lv~~L~s~--~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 5 PKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp HHHHHHHHSS--CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHCCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3444444433 566666666677775544 3444477788888888889988988999999999998887545444444
Q ss_pred HHhhHHHHHHHHHHhhcc-CCCcchhhhhHHHHHHHhccccchH
Q 017213 204 LSKNYDWFFAEYNSKLLE-SSNYITRRQAVKLLGDILLDRSNSV 246 (375)
Q Consensus 204 l~~Nyd~Ff~~yn~~Ll~-s~NYVTkRQslKLLgelLldr~N~~ 246 (375)
...+- ....- +||. +++.=+++++.-.|+.|-.+..|..
T Consensus 83 ~~~G~---i~~Lv-~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~ 122 (457)
T 1xm9_A 83 RRQNG---IREAV-SLLRRTGNAEIQKQLTGLLWNLSSTDELKE 122 (457)
T ss_dssp HHTTC---HHHHH-HHHTTCCCHHHHHHHHHHHHHHHTSSSTHH
T ss_pred HHcCC---HHHHH-HHHhhCCCHHHHHHHHHHHHHHhcCHHhHH
Confidence 44332 12222 5676 7777788888888888887766655
No 57
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=39.62 E-value=2.7e+02 Score=26.98 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=71.5
Q ss_pred hhHHHHHHHh---------ccCchhhHhHHHHHHHHHHHHHHHHHHhcchhhhhhhhh----ccCCChhhhhhHHHHHHH
Q 017213 125 IDLLDILIAG---------YENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDY----IQLPNFDIAADAAATFKE 191 (375)
Q Consensus 125 ~~il~~L~~g---------Ye~~dial~~G~mLRecir~e~la~~iL~s~~~~~fF~y----i~~~~FdIasDAf~Tfke 191 (375)
|.|++.+..+ .+.||.-...=.+||.|..|-.-+=.-|..+.|+.+.+- ++-+.-+||--++.+..+
T Consensus 114 p~Il~~VFe~TL~MI~~df~eyPehR~~Ff~LL~ai~~~cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il~~ 193 (321)
T 1w9c_A 114 PQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFT 193 (321)
T ss_dssp HHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHH
Confidence 7777776544 478999999999999999985444444777788888886 478999999999999999
Q ss_pred HHhh---ChHHHHHHHHhhHHHHHHHHH
Q 017213 192 LLTR---HKSTVAEFLSKNYDWFFAEYN 216 (375)
Q Consensus 192 lLt~---Hk~~vaeFl~~Nyd~Ff~~yn 216 (375)
+|.+ +...+.+|....|-....+.-
T Consensus 194 ll~n~~~~~~~~~~Fy~~fy~~il~~if 221 (321)
T 1w9c_A 194 LLQNVAQEEAAAQSFYQTYFCDILQHIF 221 (321)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 9984 455677888877777666654
No 58
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=36.98 E-value=58 Score=34.74 Aligned_cols=48 Identities=31% Similarity=0.360 Sum_probs=39.4
Q ss_pred hhccCCCcchhhhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhh
Q 017213 218 KLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 218 ~Ll~s~NYVTkRQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~ 266 (375)
.||++++|-+|.-|+++|.-|+..|... +-.-.++.|.-+-.+|.+|.
T Consensus 129 ~lL~~~df~vR~~alqlL~~L~~~r~~~-~Q~~Il~~p~gi~~Lv~lL~ 176 (651)
T 3grl_A 129 SLLEEFDFHVRWPGVKLLTSLLKQLGPQ-VQQIILVSPMGVSRLMDLLA 176 (651)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHSHHH-HHHHHHHSTTHHHHHHGGGG
T ss_pred HHhcCccHHHHHHHHHHHHHHHhcCcHH-HHHHHHhCcccHHHHHHHHh
Confidence 5889999999999999999999777642 33334558899999999999
No 59
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=33.81 E-value=3.4e+02 Score=26.32 Aligned_cols=177 Identities=16% Similarity=0.241 Sum_probs=85.5
Q ss_pred CCCChHHHHHHHHHHHHHhhccCCchhhhhHHHHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhchHHHHHHh
Q 017213 8 KPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITC 87 (375)
Q Consensus 8 k~KtP~ElVr~l~e~l~~L~~~~~~~~~K~e~k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d~l~~Li~~ 87 (375)
++.+|..+|+.+++.. . .+.+.+.|..++..|-.+ |.. -.++|...+ +..|+..
T Consensus 2 ~~~~P~~yv~~L~~~~---------~-------~~~~~~~L~~L~v~Lrt~----~~~-----Wv~~F~~~G-l~~Ll~~ 55 (386)
T 2bnx_A 2 SSRSAMMYIQELRSGL---------R-------DMHLLSCLESLRVSLNNN----PVS-----WVQTFGAEG-LASLLDI 55 (386)
T ss_dssp -CCCHHHHHHHHTSCC---------C-------HHHHHHHHHHHHHHHHHS----CHH-----HHHHHHHHH-HHHHHHH
T ss_pred CCCCHHHHHHHHHhcc---------c-------hHHHHHHHHHHhHHHhcC----CcH-----HHHHHHHhH-HHHHHHH
Confidence 5789999999987521 1 023567788888777643 322 455554333 2233333
Q ss_pred CCCC-----------ChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHHHHhccCchhhHhHHH--HH-HHHHH
Q 017213 88 LPKL-----------NLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGA--ML-RECIR 153 (375)
Q Consensus 88 l~~L-----------~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L~~gYe~~dial~~G~--mL-Recir 153 (375)
|..+ +.+---.+...+..++..+ +..+++.+||+.+..|..+-..+....-.-. +| --|.-
T Consensus 56 L~~~~~~~~~~~~~~d~~~~~~~l~CLkalmN~~-----~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~ 130 (386)
T 2bnx_A 56 LKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNK-----FGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCIL 130 (386)
T ss_dssp HHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSH-----HHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcccccccchhHHHHHHHHHHHHHHhCCH-----HHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcC
Confidence 3222 1111112333333333333 3567777888887777777654332211100 00 01110
Q ss_pred ------HHHHHHHH------hcchhhhhhhhhcc-CCChhhhhhHHHHHHHHHhhCh------HHHHHHHHhhHHHHHHH
Q 017213 154 ------HQSVARYV------LESQHMKKFFDYIQ-LPNFDIAADAAATFKELLTRHK------STVAEFLSKNYDWFFAE 214 (375)
Q Consensus 154 ------~e~la~~i------L~s~~~~~fF~yi~-~~~FdIasDAf~TfkelLt~Hk------~~vaeFl~~Nyd~Ff~~ 214 (375)
|+.+.+.+ =+...|+.+.+.+. ..+-|..+-++.-+..++..-+ .+-+||......+.+..
T Consensus 131 ~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~ 210 (386)
T 2bnx_A 131 PQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQE 210 (386)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHH
Confidence 22111111 12335666666664 3344455555555555555433 34566666666666543
Q ss_pred H
Q 017213 215 Y 215 (375)
Q Consensus 215 y 215 (375)
.
T Consensus 211 L 211 (386)
T 2bnx_A 211 L 211 (386)
T ss_dssp H
T ss_pred H
Confidence 3
No 60
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=33.59 E-value=2e+02 Score=23.52 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=38.7
Q ss_pred hhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchHHH
Q 017213 169 KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVM 248 (375)
Q Consensus 169 ~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~vM 248 (375)
.+...+..++-+|-.-|..++-.+-. +. .....- .++.+++.-.|+.++..||.+=
T Consensus 80 ~L~~~l~d~~~~vr~~a~~aL~~~~~--~~------------~~~~L~-~~l~d~~~~vr~~a~~aL~~~~--------- 135 (201)
T 3ltj_A 80 PLIKALKDEDGWVRQSAAVALGQIGD--ER------------AVEPLI-KALKDEDWFVRIAAAFALGEIG--------- 135 (201)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHCC--GG------------GHHHHH-HHTTCSSHHHHHHHHHHHHHHT---------
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCc--HH------------HHHHHH-HHHcCCCHHHHHHHHHHHHHhC---------
Confidence 33344455555565555555544311 11 122332 5667777777778887777752
Q ss_pred HHhhcChhhHHHHHHHhh
Q 017213 249 TRYVSSRENLRILMNLLR 266 (375)
Q Consensus 249 ~rYis~~~NLkl~M~lL~ 266 (375)
+++-+..+..+|.
T Consensus 136 -----~~~~~~~L~~~l~ 148 (201)
T 3ltj_A 136 -----DERAVEPLIKALK 148 (201)
T ss_dssp -----CGGGHHHHHHHTT
T ss_pred -----CHHHHHHHHHHHc
Confidence 4556666666666
No 61
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=32.38 E-value=3.7e+02 Score=26.99 Aligned_cols=66 Identities=12% Similarity=0.111 Sum_probs=41.5
Q ss_pred hhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccc
Q 017213 169 KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSN 244 (375)
Q Consensus 169 ~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N 244 (375)
.+..++..++=+|--=|..++..+...|+.++.+ +.+.++ .++.+++--.||.++.+|+.+.. ..|
T Consensus 317 ~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~~~~~----~~~~i~-----~~l~d~d~~Ir~~alelL~~l~~-~~n 382 (618)
T 1w63_A 317 ILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQR----HRSTIV-----DCLKDLDVSIKRRAMELSFALVN-GNN 382 (618)
T ss_dssp HHHHHHTCSSTTTHHHHHHHHHHHHHHHHHHHGG----GHHHHH-----HGGGSSCHHHHHHHHHHHHHHCC-SSS
T ss_pred HHHHHHhCCCCchHHHHHHHHHHHHhhCHHHHHH----HHHHHH-----HHccCCChhHHHHHHHHHHHHcc-ccc
Confidence 3334455555566667777888887777765543 334444 34556666677888888887764 444
No 62
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=31.57 E-value=2.3e+02 Score=29.39 Aligned_cols=125 Identities=18% Similarity=0.310 Sum_probs=71.2
Q ss_pred CchhhHhHHHHHHHHHHHHHHHHHHhcchh-hhhhhh----hccCCChhhhhhHHHHHHHHHhhCh--HHHHHHHHhhHH
Q 017213 137 NTDMALHYGAMLRECIRHQSVARYVLESQH-MKKFFD----YIQLPNFDIAADAAATFKELLTRHK--STVAEFLSKNYD 209 (375)
Q Consensus 137 ~~dial~~G~mLRecir~e~la~~iL~s~~-~~~fF~----yi~~~~FdIasDAf~TfkelLt~Hk--~~vaeFl~~Nyd 209 (375)
.||+.-.+=.+|..++++-. ..++.++. +..+++ -++.+.-+++.-|+..+.++++..+ ..+.+|+...+.
T Consensus 786 ~pd~~~~~f~ll~~~~~~~~--~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~ 863 (963)
T 2x19_B 786 HPDIVDSFMQLLAQALKRKP--DLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGR 863 (963)
T ss_dssp CHHHHHHHHHHHHHHHHHCG--GGGGCTTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTTSSCHHHHHTTTSHH
T ss_pred CchHHHHHHHHHHHHHHhCc--HHHcCCcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 35555555444444443321 12334444 554444 3467888899999999999998754 567788877766
Q ss_pred HHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchHHHHHhhcChhhHHH-HHHHhhhhccCCcch
Q 017213 210 WFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRI-LMNLLRVRYFPRMHV 275 (375)
Q Consensus 210 ~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~vM~rYis~~~NLkl-~M~lL~~~~~~~~~~ 275 (375)
.+... ++..-..-.-|..+..++++|. .+.. ..++.++- +-.+|.+..||..++
T Consensus 864 ~l~~~----l~~~l~~~~~~~~~~~~~~il~-----~l~~---~~~~~~~~~l~~~l~~~~~p~~~~ 918 (963)
T 2x19_B 864 MLLIA----VLEAIGGQASRSLMDCFADILF-----ALNK---HCFSLLSMWIKEALQPPGFPSARL 918 (963)
T ss_dssp HHHHH----HHHHHTTTSCGGGHHHHHHHHH-----HHHH---HSHHHHHHHHHHHTCSTTSSCTTC
T ss_pred HHHHH----HHHHhcccCChhHHHHHHHHHH-----HHHH---HChHHHHHHHHHHhcccCCCCCcC
Confidence 65543 3332234456777788888873 2222 34544443 334554455665544
No 63
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=30.77 E-value=1.8e+02 Score=31.62 Aligned_cols=235 Identities=13% Similarity=0.219 Sum_probs=134.2
Q ss_pred HHHhhchHHHHHHhCCCCChh---hhhhHHHHHHHHhhhcccCccchh---HH--hhhchhHHHHHHHhccCc-------
Q 017213 74 EFFRENTLRLLITCLPKLNLE---ARKDATQVVANLQRQQVHSKLIAS---DY--LEANIDLLDILIAGYENT------- 138 (375)
Q Consensus 74 e~~~~d~l~~Li~~l~~L~fE---~RKd~~~If~~llr~~~~~~~~~v---~Y--l~~~~~il~~L~~gYe~~------- 138 (375)
.+.+.+.+..|+..+..-+.. .|..+++..++++-.. + |.+ .| +..=|-++..|-.|-+..
T Consensus 493 ~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~-n---p~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~ 568 (778)
T 3opb_A 493 QLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFT-N---PGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHND 568 (778)
T ss_dssp HHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTS-C---HHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---C
T ss_pred HHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcC-C---HHHHcCCCccccchHHHHHHcCCCCCccccccccc
Confidence 345567788888888777655 6888888888877311 1 000 00 111122332222111110
Q ss_pred ---------hhhHhHHHHHHHHHHH-----HHHHHHHhcc-hhhhhhhhhccCCChhhhhhHHHHHHHHHhhChHHH-HH
Q 017213 139 ---------DMALHYGAMLRECIRH-----QSVARYVLES-QHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTV-AE 202 (375)
Q Consensus 139 ---------dial~~G~mLRecir~-----e~la~~iL~s-~~~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~v-ae 202 (375)
+.++..+++ ... |.+.+.|+.. ..+..+.+++..++=.|...|..++--|.. ++..+ ++
T Consensus 569 ~~~~~l~~feAL~ALTNL----As~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~-~~e~i~~k 643 (778)
T 3opb_A 569 EQIKLTDNYEALLALTNL----ASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS-HPLTIAAK 643 (778)
T ss_dssp CCCCHHHHHHHHHHHHHH----HHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT-SGGGTGGG
T ss_pred ccccHHHHHHHHHHHHHH----hcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC-CcHHHHHH
Confidence 111111222 222 3455556654 334445567766777888888888877765 77654 57
Q ss_pred HHHh----hHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchHHHHHhhcChhhHHHHHHHhhhhccCCcchhHH
Q 017213 203 FLSK----NYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRVRYFPRMHVEDI 278 (375)
Q Consensus 203 Fl~~----Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~vM~rYis~~~NLkl~M~lL~~~~~~~~~~~~~ 278 (375)
|+.. +..+ +.-.- .|+.+++.=|||-|.-.|+-+- -++-.+....+..++-+..+..+|+
T Consensus 644 ~~~~~~~~~~~r-L~lLV-~Ll~s~D~~~r~AAagALAnLt--s~~~~ia~~ll~~~~gi~~Ll~lL~------------ 707 (778)
T 3opb_A 644 FFNLENPQSLRN-FNILV-KLLQLSDVESQRAVAAIFANIA--TTIPLIAKELLTKKELIENAIQVFA------------ 707 (778)
T ss_dssp TSCCSSHHHHHH-HHHHH-HGGGCSCHHHHHHHHHHHHHHH--HHCHHHHHHHTTCHHHHHHHHHHHH------------
T ss_pred HHhhcCchhhcc-HHHHH-HHHcCCCHHHHHHHHHHHHHhc--CCChHHHHHHHHccccHHHHHHHHh------------
Confidence 7642 2222 23333 7899999999999998887763 2234445556666789999999999
Q ss_pred HHHHHhhhcCCCcccccccccccC--CCcccchhhheeee-ee-eecCCCChhHHHHHHHhHHHHHHHHhhCCCCCcccc
Q 017213 279 FYLAYQKLQGTEPVTFDKISLHME--SSKSIQIEAFHVFK-LF-AANQNKPPDIVSILVANRSKLLRLFADFKTDKEDEQ 354 (375)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~d--~sk~Iq~EAFhvFK-vF-vANp~K~~~I~~IL~~Nr~kLl~fl~~f~~d~~Deq 354 (375)
+ ....+|--|-.++. ++ +|--+.+.+....+.+|....-.+..-...+..|++
T Consensus 708 -----------------------~~~~~~~l~~R~~~~l~NL~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lk~~~~~~e 764 (778)
T 3opb_A 708 -----------------------DQIDDIELRQRLLMLFFGLFEVIPDNGTNEVYPLLQENQKLKDALNMSLKRGDSGPE 764 (778)
T ss_dssp -----------------------HTTTCHHHHHHHHHHHHHHHTTCCSTTTTSCCHHHHSCHHHHHHHHHHHSSSSSCSS
T ss_pred -----------------------ccCCCHHHHHHHHHHHHHHHHhhccCCChHHHHHHhcChHHHHHHHHHHhCCCchHH
Confidence 6 56666666655544 44 443456656677777787555444444455446655
Q ss_pred hH
Q 017213 355 FE 356 (375)
Q Consensus 355 F~ 356 (375)
|.
T Consensus 765 ~~ 766 (778)
T 3opb_A 765 FS 766 (778)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 64
>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}
Probab=26.15 E-value=2.6e+02 Score=25.87 Aligned_cols=78 Identities=13% Similarity=0.227 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHhhccCC-chhhhhHHHHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhh-chHHHHHHhCCC
Q 017213 13 VDIVRQTRDLIIYANRSAD-VRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRE-NTLRLLITCLPK 90 (375)
Q Consensus 13 ~ElVr~l~e~l~~L~~~~~-~~~~K~e~k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~-d~l~~Li~~l~~ 90 (375)
.|.|....|-|.+|+.-.+ -.+-+.-..+=+++|.|..--+.++|+.. -.+|.|..|+.++++- .--+.++..+..
T Consensus 75 re~v~d~l~YLkkLD~l~~~Lq~h~~Lse~l~l~kqLs~sLh~mC~~~p--ld~eLc~~l~~qL~~L~~~~~~ll~~l~d 152 (204)
T 2jqq_A 75 QEIIKDVLEYLKKLDEIYGSLRNHSQLTEALSLGKRLSKSLHEMCGIEP--LEEEICSGLIEQLYKLITASRRILESCAD 152 (204)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSSSHHHHHHHHHHHHHHHHHHHHTSSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7788888888888876210 01111111134688888888888999875 4568899998887753 123444455555
Q ss_pred CC
Q 017213 91 LN 92 (375)
Q Consensus 91 L~ 92 (375)
++
T Consensus 153 l~ 154 (204)
T 2jqq_A 153 SN 154 (204)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 65
>3r1f_A ESX-1 secretion-associated regulator ESPR; helix-turn-helix, transcription factor, helix-turn-helix transcription factor; 2.50A {Mycobacterium tuberculosis}
Probab=24.78 E-value=83 Score=26.15 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=51.9
Q ss_pred CCCChHHHHHHHH--------HHHHHhhccCCchhhhhHHHHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhc
Q 017213 8 KPRTPVDIVRQTR--------DLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFREN 79 (375)
Q Consensus 8 k~KtP~ElVr~l~--------e~l~~L~~~~~~~~~K~e~k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d 79 (375)
++-|-.|+.+.+. ..|..++.+.. .... .+.+..++++++.=-..+.|+...++..+. .++..+ .++.
T Consensus 25 ~~~T~~elA~~~~~~G~~is~s~is~~E~G~r-~~Ps-~~~l~~iA~~f~V~~~yl~~~~~~~~~~~e-l~ll~~-~rd~ 100 (135)
T 3r1f_A 25 GPHTSAEVIAALKAEGITMSAPYLSQLRSGNR-TNPS-GATMAALANFFRIKAAYFTDDEYYEKLDKE-LQWLCT-MRDD 100 (135)
T ss_dssp CCCCHHHHHHHHHTTTCCCCHHHHHHHHHTSS-CCCC-HHHHHHHHHHHTSCTHHHHCHHHHHHHHHH-HHHHHH-TTST
T ss_pred CCCCHHHHHHHHcccCCCcCHHHHHHHHCCCC-CCCC-HHHHHHHHHHhCCCHHHHcCCcchhhHHHH-HHHHHH-Hhhh
Confidence 4557777777664 55666665321 0111 123567777777666666664321111111 112222 3333
Q ss_pred hHHHHHHhCCCCChhhhhhHHHHHHHHhh
Q 017213 80 TLRLLITCLPKLNLEARKDATQVVANLQR 108 (375)
Q Consensus 80 ~l~~Li~~l~~L~fE~RKd~~~If~~llr 108 (375)
-+..+......|+=|+++.+..+...+.+
T Consensus 101 ~v~~l~~r~~~Ls~e~~~~l~~ii~~l~~ 129 (135)
T 3r1f_A 101 GVRRIAQRAHGLPSAAQQKVLDRIDELRR 129 (135)
T ss_dssp THHHHHHHHTSCCHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 34455555667888888888888877654
No 66
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=24.11 E-value=2.9e+02 Score=22.45 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=41.6
Q ss_pred hhhhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhccCCCcchhhhhHHHHHHHhccccchH
Q 017213 167 MKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSV 246 (375)
Q Consensus 167 ~~~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~s~NYVTkRQslKLLgelLldr~N~~ 246 (375)
+..+...+..++-+|-.-|...+..+= .+.. ....- .++.+++.-+|+.++.-||.+
T Consensus 109 ~~~L~~~l~d~~~~vr~~a~~aL~~~~--~~~~------------~~~L~-~~l~d~~~~vr~~A~~aL~~~-------- 165 (201)
T 3ltj_A 109 VEPLIKALKDEDWFVRIAAAFALGEIG--DERA------------VEPLI-KALKDEDGWVRQSAADALGEI-------- 165 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHT--CGGG------------HHHHH-HHTTCSSHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhC--CHHH------------HHHHH-HHHcCCCHHHHHHHHHHHHHh--------
Confidence 334444555566666666665555441 1111 22232 677778888888888888876
Q ss_pred HHHHhhcChhhHHHHHHHhh
Q 017213 247 VMTRYVSSRENLRILMNLLR 266 (375)
Q Consensus 247 vM~rYis~~~NLkl~M~lL~ 266 (375)
.+++-+..+..+|.
T Consensus 166 ------~~~~~~~~L~~~l~ 179 (201)
T 3ltj_A 166 ------GGERVRAAMEKLAE 179 (201)
T ss_dssp ------CSHHHHHHHHHHHH
T ss_pred ------CchhHHHHHHHHHh
Confidence 35556666666666
No 67
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=22.07 E-value=6.3e+02 Score=25.59 Aligned_cols=69 Identities=22% Similarity=0.244 Sum_probs=45.4
Q ss_pred hhhhhccCCChhhhhhHHHHHHHHHhhChHHHHHHHHhhHHHHHHHHHHhhcc-CCCcchhhhhHHHHHHHhccccch
Q 017213 169 KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLE-SSNYITRRQAVKLLGDILLDRSNS 245 (375)
Q Consensus 169 ~fF~yi~~~~FdIasDAf~TfkelLt~Hk~~vaeFl~~Nyd~Ff~~yn~~Ll~-s~NYVTkRQslKLLgelLldr~N~ 245 (375)
.+-.++..+.-++--=|+.++..+..+|+. .+++..+...|+. .|. +++--.||.+|.+|..+. +..|.
T Consensus 333 ~L~~~L~~~~~niry~aL~~l~~l~~~~~~--~~~~~~~~~~i~~-----~L~~d~d~~Ir~~aL~lL~~l~-~~~Nv 402 (621)
T 2vgl_A 333 QLGQFLQHRETNLRYLALESMCTLASSEFS--HEAVKTHIETVIN-----ALKTERDVSVRQRAVDLLYAMC-DRSNA 402 (621)
T ss_dssp HHHHHSSCSCHHHHHHHHHHHHHHTTCTTT--HHHHHTTHHHHHH-----HHTTCCCHHHHHHHHHHHHHHC-CHHHH
T ss_pred HHHHHhcCCCcchHHHHHHHHHHHHhccCc--HHHHHHHHHHHHH-----HhccCCCHhHHHHHHHHHHHHc-ChhhH
Confidence 344455556667777788888888888753 2345555555552 344 566668999999999987 34454
No 68
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=21.47 E-value=2.3e+02 Score=24.36 Aligned_cols=92 Identities=9% Similarity=0.021 Sum_probs=59.5
Q ss_pred CCCCCCchHHHHHHHHHHHhh------chHHHHHHhCCCCChhhhhhHHHHHHHHhhhcccCccchhHHhhhchhHHHHH
Q 017213 58 NSESEPVSEACAQLTAEFFRE------NTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDIL 131 (375)
Q Consensus 58 ~~e~ep~~e~~~qLa~e~~~~------d~l~~Li~~l~~L~fE~RKd~~~If~~llr~~~~~~~~~v~Yl~~~~~il~~L 131 (375)
+++..|..-...++|+..++. .++..|...|..=....+-.+-+|...|.+. +....++.+..|..++..|
T Consensus 22 ~d~~~~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~---Gs~~f~~~~r~~~~~Ik~l 98 (140)
T 1vdy_A 22 DEDKVAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGK---SGSEFRREMQRNSVAVRNL 98 (140)
T ss_dssp SCSSCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTT---SCHHHHHHHHHTTHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHh---CCHHHHHHHHHhHHHHHHH
Confidence 333344445677788877663 3677788888877777777777777777762 3345678888888887777
Q ss_pred H--HhccCchhhHhHHHHHHHHH
Q 017213 132 I--AGYENTDMALHYGAMLRECI 152 (375)
Q Consensus 132 ~--~gYe~~dial~~G~mLReci 152 (375)
. .|..+|--.---|...|+-.
T Consensus 99 ~~F~g~~dp~~G~d~g~~VR~~A 121 (140)
T 1vdy_A 99 FHYKGHPDPLKGDALNKAVRETA 121 (140)
T ss_dssp TTCCCCCCTTTSSCHHHHHHHHH
T ss_pred HhcCCCCCcccccchhHHHHHHH
Confidence 4 33333323445667777654
No 69
>2qfa_B Borealin; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens}
Probab=20.67 E-value=19 Score=27.51 Aligned_cols=34 Identities=32% Similarity=0.575 Sum_probs=26.3
Q ss_pred HHHHHHHHhhCCCCC--cccchHHHHHHHHHHHhcC
Q 017213 336 RSKLLRLFADFKTDK--EDEQFEADKAQVVKEIAGL 369 (375)
Q Consensus 336 r~kLl~fl~~f~~d~--~DeqF~~EK~~lI~~I~~L 369 (375)
.+||-.||+||..+- .=.++..+.+.++++|+++
T Consensus 4 ~~KLasFLkDFD~ev~~~~~~~~~~~~~llk~i~~~ 39 (62)
T 2qfa_B 4 RRKLASFLKDFDREVEIRIKQIESDRQNLLKEVDNL 39 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999997643 3456888999999988764
No 70
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=20.39 E-value=92 Score=22.61 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.1
Q ss_pred CCChHHHHHHHHHHHHHhhc
Q 017213 9 PRTPVDIVRQTRDLIIYANR 28 (375)
Q Consensus 9 ~KtP~ElVr~l~e~l~~L~~ 28 (375)
||+|+|+...+-..|..+..
T Consensus 1 p~~~~dLt~~vq~LL~qmq~ 20 (48)
T 3ci9_A 1 PKTVQDLTSVVQTLLQQMQD 20 (48)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 79999998888888776654
No 71
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.04 E-value=97 Score=25.93 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=34.0
Q ss_pred HHHHHHHhHHHHHhhhccCCCCCCchHHHHHHHHHHHhhchH
Q 017213 40 KMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTL 81 (375)
Q Consensus 40 k~eeisK~L~~mK~il~G~~e~ep~~e~~~qLa~e~~~~d~l 81 (375)
+++|++|.|..|-.-|-..+=++++-+...+|++++-+.|.-
T Consensus 37 ~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~ 78 (118)
T 2yru_A 37 VCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWD 78 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 368999999999988876666667777888999988777754
Done!