Query 017217
Match_columns 375
No_of_seqs 347 out of 1755
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 10:51:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 2.3E-31 7.9E-36 257.2 18.1 230 78-372 6-280 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 6.7E-29 2.3E-33 243.0 16.0 151 80-294 24-174 (337)
3 2bon_A Lipid kinase; DAG kinas 99.9 2.7E-27 9.1E-32 231.4 11.3 150 79-293 28-178 (332)
4 2an1_A Putative kinase; struct 98.8 2E-08 6.9E-13 95.6 11.5 124 80-232 5-131 (292)
5 2i2c_A Probable inorganic poly 98.7 6.7E-08 2.3E-12 91.4 10.6 104 81-232 1-105 (272)
6 1yt5_A Inorganic polyphosphate 98.7 2.7E-08 9.1E-13 93.5 7.1 107 81-232 1-108 (258)
7 1u0t_A Inorganic polyphosphate 98.6 1.4E-07 4.7E-12 90.8 10.0 129 80-232 4-143 (307)
8 3afo_A NADH kinase POS5; alpha 97.4 0.00046 1.6E-08 68.3 9.4 127 79-232 40-183 (388)
9 1z0s_A Probable inorganic poly 96.0 0.027 9.1E-07 53.1 9.3 93 81-215 30-122 (278)
10 3pfn_A NAD kinase; structural 94.0 0.1 3.5E-06 51.0 7.3 70 146-232 107-176 (365)
11 1o2d_A Alcohol dehydrogenase, 80.5 12 0.00041 36.0 11.2 102 81-194 41-158 (371)
12 3jzd_A Iron-containing alcohol 77.7 5.7 0.0002 38.3 7.9 89 80-189 36-125 (358)
13 3hl0_A Maleylacetate reductase 76.8 6.9 0.00024 37.6 8.2 86 80-186 34-119 (353)
14 4grd_A N5-CAIR mutase, phospho 74.6 30 0.001 29.9 10.7 84 82-187 14-99 (173)
15 1xmp_A PURE, phosphoribosylami 69.9 18 0.00063 31.1 8.2 77 80-168 10-88 (170)
16 3bfj_A 1,3-propanediol oxidore 68.9 24 0.00083 33.9 10.0 104 80-194 33-152 (387)
17 3uhj_A Probable glycerol dehyd 68.7 9.2 0.00031 37.2 6.9 91 81-192 53-146 (387)
18 1o4v_A Phosphoribosylaminoimid 64.9 46 0.0016 29.0 9.7 77 81-168 13-90 (183)
19 3rg8_A Phosphoribosylaminoimid 62.7 42 0.0014 28.6 8.9 69 92-168 10-80 (159)
20 2gru_A 2-deoxy-scyllo-inosose 62.5 12 0.00042 35.9 6.4 94 80-186 34-128 (368)
21 3iv7_A Alcohol dehydrogenase I 62.4 8.5 0.00029 37.2 5.2 84 80-186 37-120 (364)
22 3okf_A 3-dehydroquinate syntha 61.3 17 0.00057 35.5 7.1 96 79-186 61-157 (390)
23 2ywx_A Phosphoribosylaminoimid 60.8 33 0.0011 29.1 8.0 61 97-168 12-73 (157)
24 1vlj_A NADH-dependent butanol 60.5 31 0.0011 33.4 9.0 102 81-194 44-161 (407)
25 1sg6_A Pentafunctional AROM po 59.6 18 0.00062 35.1 7.1 101 80-193 36-148 (393)
26 3ox4_A Alcohol dehydrogenase 2 59.3 32 0.0011 33.1 8.8 102 79-193 30-147 (383)
27 1oj7_A Hypothetical oxidoreduc 58.4 21 0.00072 34.7 7.4 102 81-194 51-169 (408)
28 3ors_A N5-carboxyaminoimidazol 57.8 53 0.0018 28.1 8.7 63 97-168 16-80 (163)
29 3oow_A Phosphoribosylaminoimid 57.1 84 0.0029 26.9 9.9 68 92-168 13-82 (166)
30 3kuu_A Phosphoribosylaminoimid 55.5 85 0.0029 27.0 9.7 74 82-168 14-89 (174)
31 3ce9_A Glycerol dehydrogenase; 54.5 41 0.0014 31.8 8.6 87 81-188 35-124 (354)
32 3lp6_A Phosphoribosylaminoimid 52.6 54 0.0019 28.3 8.0 75 82-168 9-84 (174)
33 1u11_A PURE (N5-carboxyaminoim 52.2 69 0.0024 27.8 8.7 76 80-168 21-98 (182)
34 4b4k_A N5-carboxyaminoimidazol 51.4 73 0.0025 27.6 8.7 78 78-168 19-99 (181)
35 3qbe_A 3-dehydroquinate syntha 51.3 20 0.0007 34.6 5.8 93 81-186 44-137 (368)
36 1rrm_A Lactaldehyde reductase; 50.9 40 0.0014 32.3 7.9 100 80-192 31-148 (386)
37 3trh_A Phosphoribosylaminoimid 50.0 82 0.0028 27.0 8.7 68 92-168 14-83 (169)
38 3clh_A 3-dehydroquinate syntha 49.6 21 0.00073 33.9 5.6 94 80-186 26-119 (343)
39 1jq5_A Glycerol dehydrogenase; 47.7 33 0.0011 32.7 6.7 92 81-192 32-126 (370)
40 1ta9_A Glycerol dehydrogenase; 46.2 54 0.0018 32.4 8.1 93 80-193 91-186 (450)
41 1ujn_A Dehydroquinate synthase 46.1 27 0.00093 33.2 5.8 90 80-186 28-118 (348)
42 3s4e_A Dual specificity protei 45.0 5.8 0.0002 32.3 0.7 33 16-48 73-106 (144)
43 2j16_A SDP-1, tyrosine-protein 44.9 6.7 0.00023 34.0 1.1 32 17-48 110-142 (182)
44 1pfk_A Phosphofructokinase; tr 43.6 30 0.001 32.8 5.5 41 146-194 93-133 (320)
45 3emu_A Leucine rich repeat and 43.1 7.1 0.00024 32.8 0.9 32 17-48 80-112 (161)
46 3ezz_A Dual specificity protei 42.7 7.7 0.00026 31.5 1.1 33 16-48 73-106 (144)
47 3rf7_A Iron-containing alcohol 39.6 1.2E+02 0.0043 29.0 9.4 45 147-192 109-167 (375)
48 2nt2_A Protein phosphatase sli 38.0 8.8 0.0003 31.2 0.7 32 17-48 74-106 (145)
49 1zxx_A 6-phosphofructokinase; 36.7 30 0.001 32.8 4.3 41 146-194 92-132 (319)
50 2hig_A 6-phospho-1-fructokinas 35.0 90 0.0031 31.3 7.6 44 147-193 189-233 (487)
51 1zzw_A Dual specificity protei 34.1 11 0.00038 30.7 0.7 32 17-48 76-108 (149)
52 2hcm_A Dual specificity protei 33.2 12 0.0004 31.2 0.7 31 18-48 83-114 (164)
53 3rgo_A Protein-tyrosine phosph 33.1 11 0.00039 30.7 0.6 32 17-48 82-114 (157)
54 1wrm_A Dual specificity phosph 31.9 12 0.00041 31.3 0.6 31 18-48 77-108 (165)
55 2esb_A Dual specificity protei 31.1 14 0.00047 31.8 0.8 31 18-48 91-122 (188)
56 2h31_A Multifunctional protein 30.8 1.1E+02 0.0038 30.1 7.4 75 81-168 266-343 (425)
57 3f81_A Dual specificity protei 30.4 14 0.00049 31.1 0.8 31 18-48 108-140 (183)
58 2x9a_A Attachment protein G3P; 30.2 12 0.00041 26.8 0.2 12 149-160 39-50 (65)
59 2g6z_A Dual specificity protei 29.8 16 0.00055 32.3 1.1 32 17-48 76-108 (211)
60 3hbm_A UDP-sugar hydrolase; PS 29.7 1.6E+02 0.0055 26.9 8.1 29 146-186 224-252 (282)
61 1xah_A Sadhqs, 3-dehydroquinat 29.5 31 0.0011 32.8 3.1 93 81-189 32-129 (354)
62 2r0b_A Serine/threonine/tyrosi 29.5 15 0.00052 29.9 0.8 31 18-48 84-115 (154)
63 3cm3_A Late protein H1, dual s 28.6 15 0.0005 31.1 0.6 33 16-48 100-133 (176)
64 2y96_A Dual specificity phosph 27.9 16 0.00056 32.3 0.8 31 18-48 132-164 (219)
65 4a3s_A 6-phosphofructokinase; 27.3 40 0.0014 31.9 3.4 40 147-194 93-132 (319)
66 3gw6_A Endo-N-acetylneuraminid 27.2 19 0.00065 33.3 1.1 13 149-161 47-59 (275)
67 2hxp_A Dual specificity protei 26.9 17 0.00059 29.9 0.7 31 18-48 79-110 (155)
68 2e0t_A Dual specificity phosph 26.5 17 0.00058 29.5 0.6 26 23-48 84-110 (151)
69 2oud_A Dual specificity protei 26.4 17 0.00058 30.8 0.6 31 17-47 80-111 (177)
70 1t35_A Hypothetical protein YV 26.3 76 0.0026 27.4 4.9 34 148-187 33-67 (191)
71 1yz4_A DUSP15, dual specificit 25.8 21 0.00074 29.4 1.1 31 18-48 78-109 (160)
72 2iz6_A Molybdenum cofactor car 25.6 83 0.0028 26.9 4.9 35 147-187 44-79 (176)
73 3sbx_A Putative uncharacterize 25.5 69 0.0024 27.9 4.4 34 148-187 44-78 (189)
74 1xg8_A Hypothetical protein SA 25.2 25 0.00084 27.9 1.2 55 320-374 16-93 (111)
75 2img_A Dual specificity protei 25.1 19 0.00067 28.8 0.7 31 18-48 83-114 (151)
76 1ydh_A AT5G11950; structural g 24.7 77 0.0026 28.1 4.6 33 147-185 40-73 (216)
77 4hf7_A Putative acylhydrolase; 23.9 61 0.0021 27.5 3.8 41 152-197 56-96 (209)
78 2pq5_A Dual specificity protei 23.7 22 0.00077 30.9 0.8 26 23-48 130-156 (205)
79 4erc_A Dual specificity protei 23.2 20 0.00067 28.9 0.3 30 18-47 82-112 (150)
80 2f48_A Diphosphate--fructose-6 22.4 48 0.0017 33.9 3.1 46 146-193 165-210 (555)
81 2wgp_A Dual specificity protei 22.3 25 0.00084 30.2 0.8 32 17-48 96-128 (190)
82 1ag9_A Flavodoxin; electron tr 22.2 2.8E+02 0.0095 22.7 7.6 28 81-110 1-28 (175)
83 3qua_A Putative uncharacterize 21.5 91 0.0031 27.3 4.4 34 148-187 53-87 (199)
84 3opy_A 6-phosphofructo-1-kinas 21.4 1.7E+02 0.0057 32.0 7.1 47 147-194 688-734 (989)
85 2a33_A Hypothetical protein; s 20.9 1.1E+02 0.0036 27.1 4.7 34 148-187 45-79 (215)
86 4fyk_A Deoxyribonucleoside 5'- 20.3 3.7E+02 0.013 22.3 8.1 104 81-195 2-112 (152)
87 1czn_A Flavodoxin; FMN binding 20.1 2.6E+02 0.0089 22.5 6.9 28 81-110 1-28 (169)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=99.97 E-value=2.3e-31 Score=257.15 Aligned_cols=230 Identities=17% Similarity=0.194 Sum_probs=148.0
Q ss_pred CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017217 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (375)
Q Consensus 78 ~~~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGD 157 (375)
..+++++||+||+||++++.+.++++++.|.+.+. ++.. ..|++.+|++++++++ ..+++.||++|||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~-~~~~-----~~t~~~~~a~~~~~~~------~~~~d~vv~~GGD 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFP-DLHI-----LHTKEQGDATKYCQEF------ASKVDLIIVFGGD 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCS-EEEE-----EECCSTTHHHHHHHHH------TTTCSEEEEEECH
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCC-eEEE-----EEccCcchHHHHHHHh------hcCCCEEEEEccc
Confidence 34789999999999999998899999999987653 3322 4567889999998764 2367899999999
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEEecCCC
Q 017217 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (375)
Q Consensus 158 GTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~~~~~~ 237 (375)
||||||+|+|... ..++|||+||+||||||||+||++ .++.++ ++.|.+|+.+++|+|++.
T Consensus 74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~~----~~~~~a----~~~i~~g~~~~iDlg~v~------ 134 (304)
T 3s40_A 74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGVP----QNIAEA----AKLITKEHVKPVDVAKAN------ 134 (304)
T ss_dssp HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHH----HHHHTTCCEEEEEEEEET------
T ss_pred hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCCC----ccHHHH----HHHHHhCCeEEEEEEEEC------
Confidence 9999999999863 267999999999999999999994 455544 456778999999998641
Q ss_pred CccCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHHhhhhh------------------cCC
Q 017217 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRN------------------EKP 299 (375)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~F~Ny~siG~DA~Va~~f~~~R~------------------~~p 299 (375)
+++|+|++|+||||+|+++++..++ .+|
T Consensus 135 ----------------------------------~~~F~~~~~~G~da~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~~~ 180 (304)
T 3s40_A 135 ----------------------------------GQHFLNFWGIGLVSEVSNNIDAEEKAKLGKIGYYLSTIRTVKNAET 180 (304)
T ss_dssp ----------------------------------TEEESSEEEEC------------------CHHHHTTTC------CC
T ss_pred ----------------------------------CEEEEEEEeehHHHHHHHhcCHHHhhcCCchHHHHHHHHHHhhcCC
Confidence 2589999999999999998874321 122
Q ss_pred Ccccccccc-----cceee----ceeecccceecccCC-----------Cc-hhhhhhhhhee-E-----eccccCCccE
Q 017217 300 YLAQGPISN-----KLIYS----GYSCTQGWFLTPCIS-----------DP-NLRGLKNILRM-H-----VKKVNCSEWE 352 (375)
Q Consensus 300 ~~~~~r~~N-----k~~Y~----~~~~~~~~~~ap~~~-----------~~-~~~~l~~~~~l-~-----~~~v~~~~~~ 352 (375)
+.+.-..-+ +.++. .-..++|+.++|-+. .+ .+..+..++.. + .+.+...+.+
T Consensus 181 ~~~~i~~dg~~~~~~~~~v~v~N~~~~Ggg~~~~p~a~~~DG~Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~ 260 (304)
T 3s40_A 181 FPVKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAK 260 (304)
T ss_dssp EEEEEEETTEEEEEEEEEEEEECSSEETTEECSSTTCCTTSSCEEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEES
T ss_pred ceEEEEECCEEEEeEEEEEEEECCCcCCCCcccCCCCcCCCCEEEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEcc
Confidence 221111101 11111 111255666777433 11 11122222221 1 1224456778
Q ss_pred EEEeCCCCceEEEEeCCccc
Q 017217 353 QVAVPKRWSSNIWCEGNSCF 372 (375)
Q Consensus 353 ~i~i~~~~~~iv~ldges~~ 372 (375)
+|.|....+..+++|||.+.
T Consensus 261 ~v~i~~~~~~~~~~DGE~~~ 280 (304)
T 3s40_A 261 SIHIETEEEKEVDTDGESSL 280 (304)
T ss_dssp EEEEEESSCCEEEEC--CCE
T ss_pred EEEEEeCCCcEEEeCCCCCC
Confidence 88888777889999999764
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.96 E-value=6.7e-29 Score=243.02 Aligned_cols=151 Identities=22% Similarity=0.222 Sum_probs=115.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
+++++||+||.||++++.++++++++.|.+.+ +++.. ..|+..+++.++++++. ..+.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g-~~~~~-----~~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAG-YETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTT-EEEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcC-CeEEE-----EEecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 56799999999999998888999999998765 34332 34556678888876542 245789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEEecCCCCc
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~~~~~~~~ 239 (375)
|+||+++|.+. ..++|||+||+||+|||||+||++ .++.++ ++.|.+|+.+.+|+|++.
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~~----~~~~~a----l~~i~~g~~~~iD~g~v~-------- 151 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHIP----NDIMGA----LDVIIEGHSTKVDIGKMN-------- 151 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHH----HHHHHHTCEEEEEEEEET--------
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCCC----CCHHHH----HHHHHcCCcEEEEEEEEC--------
Confidence 99999999642 368999999999999999999984 455444 455677999999998641
Q ss_pred cCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHHhhh
Q 017217 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHL 294 (375)
Q Consensus 240 ~~~p~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~F~Ny~siG~DA~Va~~f~~~ 294 (375)
+++|+|++|+||||+|++.++..
T Consensus 152 --------------------------------~r~fl~~~~~G~~a~v~~~~~~~ 174 (337)
T 2qv7_A 152 --------------------------------NRYFINLAAGGQLTQVSYETPSK 174 (337)
T ss_dssp --------------------------------TEEESSEEEEECBCC--------
T ss_pred --------------------------------CEEEEEEeeecccHHHHHHhhHH
Confidence 25899999999999999887654
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.94 E-value=2.7e-27 Score=231.36 Aligned_cols=150 Identities=21% Similarity=0.275 Sum_probs=109.5
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
.+++++||+||.||++ +.++++.+.|.+.+. ++.. ..|++.+++.++++++. ..+.+.||++||||
T Consensus 28 ~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~-~~~~-----~~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGDG 93 (332)
T 2bon_A 28 EFPASLLILNGKSTDN---LPLREAIMLLREEGM-TIHV-----RVTWEKGDAARYVEEAR-----KFGVATVIAGGGDG 93 (332)
T ss_dssp --CCEEEEECSSSTTC---HHHHHHHHHHHTTTC-CEEE-----EECCSTTHHHHHHHHHH-----HHTCSEEEEEESHH
T ss_pred hcceEEEEECCCCCCC---chHHHHHHHHHHcCC-cEEE-----EEecCcchHHHHHHHHH-----hcCCCEEEEEccch
Confidence 3678999999999977 566778888876553 3222 23445677877765432 24578999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEEecCCCC
Q 017217 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (375)
Q Consensus 159 TV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~~~~~~~ 238 (375)
||+||+++|.+... ..++|||+||+||+|||||+|||+ .++.++ ++.+.+|+.+++|+|.+.
T Consensus 94 Tl~~v~~~l~~~~~---~~~~plgiiP~Gt~N~fa~~l~i~----~~~~~a----l~~i~~g~~~~iDlg~v~------- 155 (332)
T 2bon_A 94 TINEVSTALIQCEG---DDIPALGILPLGTANDFATSVGIP----EALDKA----LKLAIAGDAIAIDMAQVN------- 155 (332)
T ss_dssp HHHHHHHHHHHCCS---SCCCEEEEEECSSSCHHHHHTTCC----SSHHHH----HHHHHHSEEEEEEEEEET-------
T ss_pred HHHHHHHHHhhccc---CCCCeEEEecCcCHHHHHHhcCCC----CCHHHH----HHHHHcCCeEEeeEEEEC-------
Confidence 99999999985321 367899999999999999999994 455544 455667999999998641
Q ss_pred ccCCCCCCCCCccccccccccccCCCCcccccccc-eEEEEeecchhHHHHhHHhh
Q 017217 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHH 293 (375)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~-~F~Ny~siG~DA~Va~~f~~ 293 (375)
++ +|+|++|+||||+|+++++.
T Consensus 156 ---------------------------------~r~~fl~~~~~G~da~v~~~~~~ 178 (332)
T 2bon_A 156 ---------------------------------KQTCFINMATGGFGTRITTETPE 178 (332)
T ss_dssp ---------------------------------TSCEESSEEEEEEEEEC------
T ss_pred ---------------------------------CceEEEEEEeECccHHHHHHhhH
Confidence 13 89999999999999877653
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=98.81 E-value=2e-08 Score=95.61 Aligned_cols=124 Identities=15% Similarity=0.081 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhc-cc--hhhhccCCCcEEEEEcC
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAEL-GD--FCAKDTRQKMRIVVAGG 156 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~-~~--~~~~~~~~~~~Ivv~GG 156 (375)
++++++|+||.++. ..+.++.+.+.|.+.+ +++.... + .+..+... .. .......+.|.||++||
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~g-~~v~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQG-YEVIVEQ-----Q----IAHELQLKNVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTT-CEEEEEH-----H----HHHHTTCSSCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHCC-CEEEEec-----c----hhhhcccccccccchhhcccCCCEEEEEcC
Confidence 57899999998753 3467788888887654 3433210 0 01110000 00 00000134689999999
Q ss_pred chHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEE
Q 017217 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (375)
Q Consensus 157 DGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~ 232 (375)
|||++++++.+... ..|.+|| |+||.|+|++ ++ |.++. ++++.+.+|+.+.-++..+.+
T Consensus 73 DGT~l~a~~~~~~~------~~P~lGI-~~Gt~gfla~-~~-----~~~~~----~al~~i~~g~~~~~~r~~l~~ 131 (292)
T 2an1_A 73 DGNMLGAARTLARY------DINVIGI-NRGNLGFLTD-LD-----PDNAL----QQLSDVLEGRYISEKRFLLEA 131 (292)
T ss_dssp HHHHHHHHHHHTTS------SCEEEEB-CSSSCCSSCC-BC-----TTSHH----HHHHHHHTTCEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC------CCCEEEE-ECCCcccCCc-CC-----HHHHH----HHHHHHHcCCCEEEEeEEEEE
Confidence 99999999999752 2334777 8999888886 34 33444 445667788876666665554
No 5
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.69 E-value=6.7e-08 Score=91.41 Aligned_cols=104 Identities=12% Similarity=0.121 Sum_probs=70.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV 160 (375)
+++.+|+||+ .+..+..+++.+.|...+ +++. ..+.|.||++|||||+
T Consensus 1 mki~ii~n~~---~~~~~~~~~l~~~l~~~g-~~v~----------------------------~~~~D~vv~lGGDGT~ 48 (272)
T 2i2c_A 1 MKYMITSKGD---EKSDLLRLNMIAGFGEYD-MEYD----------------------------DVEPEIVISIGGDGTF 48 (272)
T ss_dssp CEEEEEECCS---HHHHHHHHHHHHHHTTSS-CEEC----------------------------SSSCSEEEEEESHHHH
T ss_pred CEEEEEECCC---HHHHHHHHHHHHHHHHCC-CEeC----------------------------CCCCCEEEEEcCcHHH
Confidence 4688999963 344567778888886643 2320 1346899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCc-EEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEE
Q 017217 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (375)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~p-lgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~ 232 (375)
.++++.+... ..++| +|| |+|| |+|...+. |.+ ++++++.+.+|+.+.-++..+..
T Consensus 49 l~aa~~~~~~-----~~~~PilGI-n~G~-lgfl~~~~-----~~~----~~~~l~~l~~g~~~i~~r~~L~~ 105 (272)
T 2i2c_A 49 LSAFHQYEER-----LDEIAFIGI-HTGH-LGFYADWR-----PAE----ADKLVKLLAKGEYQKVSYPLLKT 105 (272)
T ss_dssp HHHHHHTGGG-----TTTCEEEEE-ESSS-CCSSCCBC-----GGG----HHHHHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHHhhc-----CCCCCEEEE-eCCC-CCcCCcCC-----HHH----HHHHHHHHHcCCCEEEEEEEEEE
Confidence 9999998642 12567 666 9999 66887775 333 34455667788776555555543
No 6
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.67 E-value=2.7e-08 Score=93.46 Aligned_cols=107 Identities=21% Similarity=0.241 Sum_probs=70.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV 160 (375)
+++++|+||.||.+ ..++.+++.+.|. .+++. + . + +. ...+.|.||++|||||+
T Consensus 1 mki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~--------~-~--~-----~~------~~~~~D~vv~~GGDGTl 54 (258)
T 1yt5_A 1 MKIAILYREEREKE-GEFLKEKISKEHE---VIEFG--------E-A--N-----AP------GRVTADLIVVVGGDGTV 54 (258)
T ss_dssp CEEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEE--------E-S--S-----SC------SCBCCSEEEEEECHHHH
T ss_pred CEEEEEEeCCCchH-HHHHHHHHHHHhc---CCcee--------c-c--c-----cc------ccCCCCEEEEEeCcHHH
Confidence 36899999999976 6667677766654 23321 1 1 1 10 12457999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCc-EEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeEEEE
Q 017217 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (375)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~p-lgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w~v~~ 232 (375)
+++++.+.. .+| +|| ++||.+.|+ .+. |.+.. ++++.+.+|+.+.-++..+.+
T Consensus 55 l~~a~~~~~--------~~PilGI-n~G~~Gfl~-~~~-----~~~~~----~al~~i~~g~~~i~~r~~l~~ 108 (258)
T 1yt5_A 55 LKAAKKAAD--------GTPMVGF-KAGRLGFLT-SYT-----LDEID----RFLEDLRNWNFREETRWFIQI 108 (258)
T ss_dssp HHHHTTBCT--------TCEEEEE-ESSSCCSSC-CBC-----GGGHH----HHHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHhCC--------CCCEEEE-ECCCCCccC-cCC-----HHHHH----HHHHHHHcCCceEEEEEEEEE
Confidence 999987752 345 777 599996665 454 34444 445667788876555555544
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.60 E-value=1.4e-07 Score=90.78 Aligned_cols=129 Identities=15% Similarity=0.148 Sum_probs=73.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccc-eee--cc-h------h-HHHHHHhccchhhhccCCC
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHE-FVQ--YG-L------A-CLEKLAELGDFCAKDTRQK 148 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~-~~t--~~-~------~-~a~~la~~~~~~~~~~~~~ 148 (375)
++++++|+||.++. ..+..+++.+.|...+ +++....... ... .. . + +.+.+.+.. ....+.
T Consensus 4 m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ 76 (307)
T 1u0t_A 4 HRSVLLVVHTGRDE--ATETARRVEKVLGDNK-IALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQ----HAADGC 76 (307)
T ss_dssp -CEEEEEESSSGGG--GSHHHHHHHHHHHTTT-CEEEEEC---------------------------------------C
T ss_pred CCEEEEEEeCCCHH--HHHHHHHHHHHHHHCC-CEEEEecchhhhhhccccccccccccccccccccccc----ccccCC
Confidence 57899999999864 3467788888887765 3332211100 000 00 0 0 011111100 012457
Q ss_pred cEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeee
Q 017217 149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 228 (375)
Q Consensus 149 ~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~w 228 (375)
|.||++|||||++++++.+... ..|.+|| ++||.|.|+. +. +.++.+ +++.+.+|+...-++.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~------~~pvlgi-~~G~~gfl~~-~~-----~~~~~~----~~~~i~~g~~~~~~r~ 139 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNA------SIPVLGV-NLGRIGFLAE-AE-----AEAIDA----VLEHVVAQDYRVEDRL 139 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHH------TCCEEEE-ECSSCCSSCS-EE-----GGGHHH----HHHHHHHTCCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHhccC------CCCEEEE-eCCCCccCcc-cC-----HHHHHH----HHHHHHcCCcEEEEEE
Confidence 8999999999999999998752 2344775 8999998884 43 334444 4555667877665555
Q ss_pred EEEE
Q 017217 229 HAVI 232 (375)
Q Consensus 229 ~v~~ 232 (375)
.+.+
T Consensus 140 ~l~~ 143 (307)
T 1u0t_A 140 TLDV 143 (307)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 5443
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.00046 Score=68.27 Aligned_cols=127 Identities=17% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcC-eeEEeeecccceeecchhHHHHHHhcc----------c------hh
Q 017217 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELG----------D------FC 141 (375)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~-v~dl~~~~p~~~~t~~~~~a~~la~~~----------~------~~ 141 (375)
+++++++|.||.. ....+....+.+.|.... .+++... + ..+.++.... . ..
T Consensus 40 ~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve-------~--~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (388)
T 3afo_A 40 PLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQ-------P--DVAEEISQDFKSPLENDPNRPHILYTGPE 108 (388)
T ss_dssp CCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECC-------H--HHHHHHHTTCCSCGGGCTTSCEEEEECCH
T ss_pred CCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEe-------C--chhhhhhhhccccccccccccccccccch
Confidence 4688999999874 334556677777776651 2333211 0 1112221110 0 00
Q ss_pred hhccCCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCC
Q 017217 142 AKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGP 221 (375)
Q Consensus 142 ~~~~~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~ 221 (375)
.....+.|.||++|||||+..++..+... ...|-||| ++||-+-|+ .+.. . .++.+++.+.+|+
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~-----~vpPiLGI-N~G~lGFLt-~~~~-----~----~~~~al~~il~g~ 172 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNT-----QVPPVLAF-ALGTLGFLS-PFDF-----K----EHKKVFQEVISSR 172 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTS-----CCCCEEEE-ECSSCCSSC-CEEG-----G----GHHHHHHHHHTTC
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhccc-----CCCeEEEE-ECCCcccCC-cCCh-----H----HHHHHHHHHhcCC
Confidence 00012468999999999999999877541 11134665 899874443 3432 2 3445566777888
Q ss_pred eeEeeeeEEEE
Q 017217 222 ICRLDSWHAVI 232 (375)
Q Consensus 222 ~~~iD~w~v~~ 232 (375)
.....+-.+++
T Consensus 173 ~~~~~r~~L~~ 183 (388)
T 3afo_A 173 AKCLHRTRLEC 183 (388)
T ss_dssp CEEEEECCEEE
T ss_pred ceEEEeeEEEE
Confidence 76655555544
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.97 E-value=0.027 Score=53.13 Aligned_cols=93 Identities=19% Similarity=0.300 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV 160 (375)
+++.++.|+..- .+++.+.|...+ +++..... . + ....+.|.||+.|||||+
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~g-~~v~~~~~------~-------~-------~~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRLE-VEVELFNQ------P-------S-------EELENFDFIVSVGGDGTI 81 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHTT-CEEEEESS------C-------C-------GGGGGSSEEEEEECHHHH
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHCC-CEEEEccc------c-------c-------cccCCCCEEEEECCCHHH
Confidence 469999997654 556666776654 33322110 0 0 012356899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHH
Q 017217 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQ 215 (375)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~ 215 (375)
-.++..+.. . +|+-=|.+||-+=|+. +. +.+..++++++++
T Consensus 82 L~aa~~~~~-------~-~PilGIN~G~lGFLt~-~~-----~~~~~~~l~~l~~ 122 (278)
T 1z0s_A 82 LRILQKLKR-------C-PPIFGINTGRVGLLTH-AS-----PENFEVELKKAVE 122 (278)
T ss_dssp HHHHTTCSS-------C-CCEEEEECSSSCTTCC-BB-----TTBCHHHHHHHHH
T ss_pred HHHHHHhCC-------C-CcEEEECCCCCccccc-cC-----HHHHHHHHHHHHh
Confidence 777654432 3 6766667785433332 21 3344556655543
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=94.00 E-value=0.1 Score=50.97 Aligned_cols=70 Identities=26% Similarity=0.382 Sum_probs=43.6
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEe
Q 017217 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRL 225 (375)
Q Consensus 146 ~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg~~~~~~~~~~~al~~~l~~i~~g~~~~i 225 (375)
...|.||+.|||||+-.++..+.. ..+|+-=|-+| +||+=..+..+ .++..|+.+.+|+...-
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G-------~LGFLt~~~~~---~~~~~l~~vl~g~~~v~ 169 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG-------SLGFLTPFSFE---NFQSQVTQVIEGNAAVV 169 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS-------SCTTTCCEEST---THHHHHHHHHHSCCBEE
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC-------CCccceeecHH---HHHHHHHHHHcCCCeEE
Confidence 456899999999999888876543 45665444455 45654433322 34455666777876655
Q ss_pred eeeEEEE
Q 017217 226 DSWHAVI 232 (375)
Q Consensus 226 D~w~v~~ 232 (375)
.+-.+++
T Consensus 170 ~R~~L~~ 176 (365)
T 3pfn_A 170 LRSRLKV 176 (365)
T ss_dssp EECCEEE
T ss_pred EEeeEEE
Confidence 5554444
No 11
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=80.47 E-value=12 Score=35.99 Aligned_cols=102 Identities=22% Similarity=0.262 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
++++|+..+.+-... .+.+++...|..... + .+....|.. .....+++++.+. ..+.|.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 688999887543222 256777777765432 2 122222222 1233444444321 235789999988 7
Q ss_pred HHHHHHHHHhhcccC------------CCCCCCcEEEeeC--CCccchhh
Q 017217 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLSR 194 (375)
Q Consensus 159 TV~eVln~L~~~~~~------------~~~~~~plgiIPl--GTGNdlAr 194 (375)
++..+...+...... .....+|+..||. |||-....
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t~ 158 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP 158 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhcC
Confidence 777777766542110 0015789999996 67655443
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=77.67 E-value=5.7 Score=38.25 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=52.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
.++++|+..+.. ..+.+++...|....+.-+..+.|.. .....++.++.+. ..+.|.||++|| |+
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 100 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHV----PIESARDATARAR-----EAGADCAVAVGG-GS 100 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HHTCSEEEEEES-HH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-cH
Confidence 367888876642 23567888888764321122222221 1123344433221 235689999999 89
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC-CCc
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL-GTG 189 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl-GTG 189 (375)
+..+...+... ..+|+..||. +||
T Consensus 101 viD~aK~iA~~------~~~p~i~IPTT~tg 125 (358)
T 3jzd_A 101 TTGLGKAIALE------TGMPIVAIPTTYAG 125 (358)
T ss_dssp HHHHHHHHHHH------HCCCEEEEECSSCC
T ss_pred HHHHHHHHHhc------cCCCEEEEeCCccc
Confidence 98888877653 4688999996 444
No 13
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=76.85 E-value=6.9 Score=37.58 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
.++++|+..+.. ..+.+++...|....+.-+....|.. .....+++++.+. ..+.|.||++|| |+
T Consensus 34 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 98 (353)
T 3hl0_A 34 LSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHT----PVEVTKTAVEAYR-----AAGADCVVSLGG-GS 98 (353)
T ss_dssp CCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCC----cHHHHHHHHHHHh-----ccCCCEEEEeCC-cH
Confidence 367888876542 23567888888764321111222221 1123444433221 245689999999 89
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
+..+...+... ..+|+..||.
T Consensus 99 ~iD~aK~iA~~------~~~p~i~IPT 119 (353)
T 3hl0_A 99 TTGLGKAIALR------TDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHH------HCCEEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 98888877653 4689999996
No 14
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=74.62 E-value=30 Score=29.85 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=53.2
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC-cEEEEEcCchH
Q 017217 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDGT 159 (375)
Q Consensus 82 ~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~-~~Ivv~GGDGT 159 (375)
++.||. |+..-....++....|...++ ||+.+...+. .+....++++++. .+.. -.|.++||.|-
T Consensus 14 ~V~Iim----GS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~aah 80 (173)
T 4grd_A 14 LVGVLM----GSSSDWDVMKHAVAILQEFGVPYEAKVVSAHR----MPDEMFDYAEKAR-----ERGLRAIIAGAGGAAH 80 (173)
T ss_dssp SEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHT-----TTTCSEEEEEEESSCC
T ss_pred eEEEEe----CcHhHHHHHHHHHHHHHHcCCCEEEEEEcccc----CHHHHHHHHHHHH-----hcCCeEEEEecccccc
Confidence 355655 333333466777778877776 8888765432 3455677776542 1223 36777899999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
+--|+.++. ..|.||+ |.-
T Consensus 81 LpgvvA~~t--------~~PVIgV-Pv~ 99 (173)
T 4grd_A 81 LPGMLAAKT--------TVPVLGV-PVA 99 (173)
T ss_dssp HHHHHHHHC--------CSCEEEE-EEC
T ss_pred chhhheecC--------CCCEEEE-EcC
Confidence 999998885 3455565 643
No 15
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=69.94 E-value=18 Score=31.12 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=48.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCc
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGD 157 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGD 157 (375)
++|...|+ .|+..-....++....|...++ ||+.+...+. .+....++++++. .+. .-.|.++||.
T Consensus 10 ~~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~a 77 (170)
T 1xmp_A 10 MKSLVGVI---MGSTSDWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETAR-----ERGLKVIIAGAGGA 77 (170)
T ss_dssp -CCSEEEE---ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEEESS
T ss_pred CCCcEEEE---ECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccC----CHHHHHHHHHHHH-----hCCCcEEEEECCch
Confidence 55555554 3444334566777788877776 8888765432 3456777776542 112 2467778999
Q ss_pred hHHHHHHHHHh
Q 017217 158 GTVGWVLGSVG 168 (375)
Q Consensus 158 GTV~eVln~L~ 168 (375)
+-+--++.++.
T Consensus 78 a~LpgvvA~~t 88 (170)
T 1xmp_A 78 AHLPGMVAAKT 88 (170)
T ss_dssp CCHHHHHHTTC
T ss_pred hhhHHHHHhcc
Confidence 99999987764
No 16
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=68.93 E-value=24 Score=33.90 Aligned_cols=104 Identities=14% Similarity=0.191 Sum_probs=55.1
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGD 157 (375)
.++++|+..+..-... ..+.+++...|....+ + .+....|.. .....+++++.+. ..+.|.||++||
T Consensus 33 ~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 101 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG- 101 (387)
T ss_dssp CSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES-
T ss_pred CCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 3678888877554320 0145667777765432 2 122222222 1233444443321 235689999988
Q ss_pred hHHHHHHHHHhhcc----------c--CCCCCCCcEEEeeC--CCccchhh
Q 017217 158 GTVGWVLGSVGELN----------K--QGREPVPPVAIIPL--GTGNDLSR 194 (375)
Q Consensus 158 GTV~eVln~L~~~~----------~--~~~~~~~plgiIPl--GTGNdlAr 194 (375)
|++..+...+.... . ......+|+..||. |||-....
T Consensus 102 Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt~ 152 (387)
T 3bfj_A 102 GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTR 152 (387)
T ss_dssp HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGCS
T ss_pred cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccccC
Confidence 77777776664320 0 00125789999996 66654443
No 17
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=68.74 E-value=9.2 Score=37.24 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=50.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
++++||..+..- +.+.+++...|.. ++ +.+....+... ....+++++.+. ..+.|.||++|| |+
T Consensus 53 ~r~liVtd~~~~----~~~~~~v~~~L~~-g~~~~~~~~~~~p~----~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLF----DALSERIGKSCGD-SLDIRFERFGGECC----TSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTH----HHHHHHC-------CCEEEEEECCSSCS----HHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHH----HHHHHHHHHHHHc-CCCeEEEEcCCCCC----HHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 788888877553 2366777777876 42 22222222221 123444443221 235689999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CCccch
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDL 192 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl--GTGNdl 192 (375)
+..+...+.-. ..+|+..||. |||--.
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPTTagtgSev 146 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPTIASTDAPC 146 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCSSCCCSTTT
T ss_pred HHHHHHHHHHh------cCCCEEEecCcccCCccc
Confidence 88888877643 4689999997 554433
No 18
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=64.85 E-value=46 Score=29.00 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=49.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
-|+..|+ .|+..-....++....|...++ ||+.+...+. .+....++++++.. ..-.-.|.++||.+-
T Consensus 13 ~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGII---MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHR----TPDRMFEYAKNAEE----RGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEE---ESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEEESSCC
T ss_pred CCeEEEE---eccHHHHHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEecCcccc
Confidence 3444444 3444434566777888877775 8887765432 34567777765421 111246778899999
Q ss_pred HHHHHHHHh
Q 017217 160 VGWVLGSVG 168 (375)
Q Consensus 160 V~eVln~L~ 168 (375)
+--|+.++.
T Consensus 82 LpgvvA~~t 90 (183)
T 1o4v_A 82 LPGMVASIT 90 (183)
T ss_dssp HHHHHHHHC
T ss_pred cHHHHHhcc
Confidence 999998885
No 19
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=62.66 E-value=42 Score=28.59 Aligned_cols=69 Identities=10% Similarity=0.144 Sum_probs=44.7
Q ss_pred CCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017217 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (375)
Q Consensus 92 G~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGDGTV~eVln~L~ 168 (375)
|+..-....++....|...++ |++.+...+. .+....++++++. .... .-.|.++||.+-+--++.++.
T Consensus 10 gs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~~~~~~~~a~----~~~~~~ViIa~AG~aa~LpgvvA~~t 80 (159)
T 3rg8_A 10 GSSSDMGHAEKIASELKTFGIEYAIRIGSAHK----TAEHVVSMLKEYE----ALDRPKLYITIAGRSNALSGFVDGFV 80 (159)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHHH----TSCSCEEEEEECCSSCCHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHhh----hcCCCcEEEEECCchhhhHHHHHhcc
Confidence 433334566777788877776 8887765432 3556677776542 1112 336777799999999998885
No 20
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=62.46 E-value=12 Score=35.90 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhc-CeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE-QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~-~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
.++++|+.++.... ...+++...|... . +........+ .......+.++.+.+.+ ....+.+.||++|| |
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~-~~~~~~~~ge-~~k~~~~v~~~~~~~~~--~~~~r~d~iIalGG-G 104 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAP-VHILRFQGGE-EYKTLSTVTNLQERAIA--LGANRRTAIVAVGG-G 104 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSC-EEEEEECCSG-GGCSHHHHHHHHHHHHH--TTCCTTEEEEEEES-H
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccc-eeEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCcEEEEECC-h
Confidence 47899999886542 3567777777653 2 2211111111 01112233433332110 11244688888888 8
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 159 TV~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
++..+...+.... ...+|+..||.
T Consensus 105 sv~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 105 LTGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh----cCCCCEEEECC
Confidence 8888887776432 25689999997
No 21
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=62.43 E-value=8.5 Score=37.15 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=48.9
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
.++++|+..+.. ..+.+++.+.|....+|+ .+.|..- ....++.++.+. ..+.|.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~--~v~~~p~----~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHD--EVVMHVP----IEVAERARAVAT-----DNEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEEC--CCCTTCB----HHHHHHHHHHHH-----HTTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEc--ceecCCC----HHHHHHHHHHHH-----hcCCCEEEEeCC-cH
Confidence 356778776542 234566666665321232 2222221 223444433221 245789999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
+..+...+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEcC
Confidence 88888877653 4689999996
No 22
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=61.32 E-value=17 Score=35.53 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=54.2
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017217 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (375)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGD 157 (375)
..++++|+.++... +.+.+++...|...+. +........+. ......++++.+.+.+ ...++.+.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~-~kt~~~v~~~~~~l~~--~~~~R~d~IIAvGG- 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQ-YKTLETFNTVMSFLLE--HNYSRDVVVIALGG- 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGG-GCBHHHHHHHHHHHHH--TTCCTTCEEEEEES-
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcC-CchHHHHHHHHHHHHh--cCCCcCcEEEEECC-
Confidence 35789999988653 3366788888876542 22211111110 0112334444433211 11334578888888
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 158 GTV~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
|++..+...+.... ...+|+..||.
T Consensus 133 Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 88888887664321 25789999997
No 23
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=60.84 E-value=33 Score=29.14 Aligned_cols=61 Identities=16% Similarity=0.261 Sum_probs=42.2
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 017217 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (375)
Q Consensus 97 ~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV~eVln~L~ 168 (375)
....++....|...++ ||+.+...+. .+....++++++ ...-.|.++||.+-+--++.++.
T Consensus 12 ~~v~~~a~~~l~~~gi~~dv~V~saHR----~p~~~~~~~~~a-------~~~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 12 LKIAEKAVNILKEFGVEFEVRVASAHR----TPELVEEIVKNS-------KADVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHC-------CCSEEEEEEESSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHhc-------CCCEEEEEcCchhhhHHHHHhcc
Confidence 3456777777877765 8888765432 355677777653 22447788899999999987764
No 24
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=60.46 E-value=31 Score=33.43 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=54.3
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eE-EeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~d-l~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
++++|+..+.+-.. ..+.+++...|...++ +. +..+.|.. .....+++++.+. ..+.|.||++|| |
T Consensus 44 ~r~liVtd~~~~~~--~g~~~~v~~~L~~~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 111 (407)
T 1vlj_A 44 RKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG-G 111 (407)
T ss_dssp CEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-H
T ss_pred CeEEEEECchHHhh--ccHHHHHHHHHHHcCCeEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 67888876432111 1256777777765442 21 11122221 1233444443221 245689999988 7
Q ss_pred HHHHHHHHHhhcc------------cCCCCCCCcEEEeeC--CCccchhh
Q 017217 159 TVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLSR 194 (375)
Q Consensus 159 TV~eVln~L~~~~------------~~~~~~~~plgiIPl--GTGNdlAr 194 (375)
++..+...+.... .......+|+..||. |||--...
T Consensus 112 sviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt~ 161 (407)
T 1vlj_A 112 SVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNG 161 (407)
T ss_dssp HHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSS
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhcC
Confidence 8877777665421 001125789999996 66544443
No 25
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=59.63 E-value=18 Score=35.06 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=56.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhc------CeeEE--eeecccceeecchhHHHHHHhccchhhhc--cCCCc
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE------QVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKM 149 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~------~v~dl--~~~~p~~~~t~~~~~a~~la~~~~~~~~~--~~~~~ 149 (375)
.++++|+.++... +...+++...|... . +++ ....+.+. ........++.+.+.+ .. ..+.+
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g-~~~~~~~~~~gE~-~k~~~~v~~~~~~~~~--~~~~~~r~d 107 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPS-PRLLIYNRPPGEV-SKSRQTKADIEDWMLS--QNPPCGRDT 107 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSC-CEEEEEEECSSGG-GSSHHHHHHHHHHHHT--SSSCCCTTC
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCC-ceeEEEEeCCCCC-CCCHHHHHHHHHHHHH--cCCCCCCCC
Confidence 4678899886432 22556777777543 2 222 12222110 1112333444433210 11 23348
Q ss_pred EEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC--CCccchh
Q 017217 150 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (375)
Q Consensus 150 ~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPl--GTGNdlA 193 (375)
.||++|| |++..+...+.... ...+|+..||. ||+.|-+
T Consensus 108 ~iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 108 VVIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 8888887 78888877765422 15789999998 8888874
No 26
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=59.32 E-value=32 Score=33.14 Aligned_cols=102 Identities=11% Similarity=0.203 Sum_probs=56.5
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcC
Q 017217 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (375)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GG 156 (375)
..++++|+..+.- ....+.+++...|...++ + .+....|.. .....+++++.+. ..+.|.||++||
T Consensus 30 g~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG 97 (383)
T 3ox4_A 30 GFKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG 97 (383)
T ss_dssp CCCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES
T ss_pred CCCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC
Confidence 3467888877531 111256788888876542 2 222223322 1223444443321 235689999999
Q ss_pred chHHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccchh
Q 017217 157 DGTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (375)
Q Consensus 157 DGTV~eVln~L~~~~~------------~~~~~~~plgiIPl--GTGNdlA 193 (375)
|++..+...+..... ......+|+..||. |||-...
T Consensus 98 -Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 98 -GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp -HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred -cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 888887776643210 01124789999996 6654443
No 27
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=58.39 E-value=21 Score=34.67 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV 160 (375)
++++|+..+.+-.. ..+.+++...|....++.+..+.|.. ......++++.+. ..+.|.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 68888876542211 11567777777511111222222221 1223344433221 235589999998 788
Q ss_pred HHHHHHHhhccc---------------CCCCCCCcEEEeeC--CCccchhh
Q 017217 161 GWVLGSVGELNK---------------QGREPVPPVAIIPL--GTGNDLSR 194 (375)
Q Consensus 161 ~eVln~L~~~~~---------------~~~~~~~plgiIPl--GTGNdlAr 194 (375)
..+...+..... ......+|+..||. |||-....
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~ 169 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNA 169 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCC
Confidence 777776654211 00125689999996 77655443
No 28
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=57.78 E-value=53 Score=28.05 Aligned_cols=63 Identities=14% Similarity=0.204 Sum_probs=43.2
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017217 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (375)
Q Consensus 97 ~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGDGTV~eVln~L~ 168 (375)
....++....|...++ ||+.+...+. .+....++++++. .+. .-.|.++||.+-+--++.++.
T Consensus 16 ~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~LpgvvA~~t 80 (163)
T 3ors_A 16 WKIMQESCNMLDYFEIPYEKQVVSAHR----TPKMMVQFASEAR-----ERGINIIIAGAGGAAHLPGMVASLT 80 (163)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEEESSCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCcC----CHHHHHHHHHHHH-----hCCCcEEEEECCchhhhHHHHHhcc
Confidence 3456777778877765 8888765432 3556777776542 122 246778899999999998875
No 29
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=57.15 E-value=84 Score=26.88 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=44.1
Q ss_pred CCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017217 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (375)
Q Consensus 92 G~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGDGTV~eVln~L~ 168 (375)
|+..-....++....|...++ ||+.+...+. .+....++++++. .+. .-.|.++||.+-+--++.++.
T Consensus 13 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----tp~~l~~~~~~~~-----~~g~~ViIa~AG~aa~LpgvvA~~t 82 (166)
T 3oow_A 13 GSKSDWSTMKECCDILDNLGIGYECEVVSAHR----TPDKMFDYAETAK-----ERGLKVIIAGAGGAAHLPGMVAAKT 82 (166)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTT-----TTTCCEEEEEECSSCCHHHHHHHTC
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcC----CHHHHHHHHHHHH-----hCCCcEEEEECCcchhhHHHHHhcc
Confidence 433334566777788877775 8887765432 3455666766542 122 346777899999999998774
No 30
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=55.46 E-value=85 Score=27.03 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=48.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchH
Q 017217 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (375)
Q Consensus 82 ~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGDGT 159 (375)
++.||. |+..-....++....|...++ ||+.+...+. .+....++++++. .+. .-.|.++|+.+-
T Consensus 14 ~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR----~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 80 (174)
T 3kuu_A 14 KIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAHR----TPDRLFSFAEQAE-----ANGLHVIIAGNGGAAH 80 (174)
T ss_dssp CEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTT-----TTTCSEEEEEEESSCC
T ss_pred cEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHH-----hCCCcEEEEECChhhh
Confidence 355554 333334566777778877776 8888765432 4566777776542 122 346778899999
Q ss_pred HHHHHHHHh
Q 017217 160 VGWVLGSVG 168 (375)
Q Consensus 160 V~eVln~L~ 168 (375)
+--++.++.
T Consensus 81 LpgvvA~~t 89 (174)
T 3kuu_A 81 LPGMLAAKT 89 (174)
T ss_dssp HHHHHHHTC
T ss_pred hHHHHHhcc
Confidence 999998875
No 31
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=54.53 E-value=41 Score=31.77 Aligned_cols=87 Identities=9% Similarity=0.105 Sum_probs=52.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
++++|+..+..-. ...+++...|..... +.+....|.. .....+++ +.+. ..+.|.||++|| |+
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~~~~----~~~~v~~~-~~~~-----~~~~d~IIavGG-Gs 99 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVETVKNI----DFDEIGTN-AFKI-----PAEVDALIGIGG-GK 99 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEEECCC----BHHHHHHH-HTTS-----CTTCCEEEEEES-HH
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEecCCCC----CHHHHHHH-HHhh-----hcCCCEEEEECC-hH
Confidence 5888998775432 355777888865432 2211102222 12334444 3321 245688998887 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GT 188 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl--GT 188 (375)
+..+...+.-. ..+|+..||. ||
T Consensus 100 v~D~aK~vA~~------~~~p~i~IPTT~~t 124 (354)
T 3ce9_A 100 AIDAVKYMAFL------RKLPFISVPTSTSN 124 (354)
T ss_dssp HHHHHHHHHHH------HTCCEEEEESCCSS
T ss_pred HHHHHHHHHhh------cCCCEEEecCcccC
Confidence 88888777632 4689999996 55
No 32
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=52.59 E-value=54 Score=28.28 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=48.4
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017217 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (375)
Q Consensus 82 ~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGTV 160 (375)
++.||. |+..-....++....|...++ ||+.+...+. .+....++++++.. ..-.-.|.++||.+-+
T Consensus 9 ~V~Iim----gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIM----GSDSDWPVMADAAAALAEFDIPAEVRVVSAHR----TPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCC----CHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 355554 333334566777778877775 8888765432 35567777765421 1123577888999999
Q ss_pred HHHHHHHh
Q 017217 161 GWVLGSVG 168 (375)
Q Consensus 161 ~eVln~L~ 168 (375)
--++.++.
T Consensus 77 pgvvA~~t 84 (174)
T 3lp6_A 77 PGMVAAAT 84 (174)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99998875
No 33
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=52.16 E-value=69 Score=27.81 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=49.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCc
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGD 157 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGD 157 (375)
..++.||. |+..-....++....|...++ ||+.+...+. .+....++++++. .+. .-.|.++||.
T Consensus 21 ~~~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~a 87 (182)
T 1u11_A 21 APVVGIIM----GSQSDWETMRHADALLTELEIPHETLIVSAHR----TPDRLADYARTAA-----ERGLNVIIAGAGGA 87 (182)
T ss_dssp CCSEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTT-----TTTCCEEEEEEESS
T ss_pred CCEEEEEE----CcHHHHHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHH-----hCCCcEEEEecCch
Confidence 34566665 333333466777778877776 8888765432 3556777776542 112 2467778999
Q ss_pred hHHHHHHHHHh
Q 017217 158 GTVGWVLGSVG 168 (375)
Q Consensus 158 GTV~eVln~L~ 168 (375)
+-+--|+.++.
T Consensus 88 a~LpgvvA~~t 98 (182)
T 1u11_A 88 AHLPGMCAAWT 98 (182)
T ss_dssp CCHHHHHHHHC
T ss_pred hhhHHHHHhcc
Confidence 99999998885
No 34
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=51.41 E-value=73 Score=27.62 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=47.3
Q ss_pred CCCCcE-EEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC-cEEEEE
Q 017217 78 PPEAPM-VVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVA 154 (375)
Q Consensus 78 ~~~~~l-lviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~-~~Ivv~ 154 (375)
..++|+ .||. |+..-....+.....|.+.++ |++.+...+. .+....++++++. .++. -.|.++
T Consensus 19 ~~mkp~V~Iim----GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHR----tp~~l~~~~~~a~-----~~g~~ViIa~A 85 (181)
T 4b4k_A 19 SHMKSLVGVIM----GSTSDWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETAR-----ERGLKVIIAGA 85 (181)
T ss_dssp ---CCSEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEE
T ss_pred CCCCccEEEEE----CCHhHHHHHHHHHHHHHHcCCCeeEEEEcccc----ChHHHHHHHHHHH-----hcCceEEEEec
Confidence 445664 4554 333334566778888888776 8887765432 3455667776542 1233 366778
Q ss_pred cCchHHHHHHHHHh
Q 017217 155 GGDGTVGWVLGSVG 168 (375)
Q Consensus 155 GGDGTV~eVln~L~ 168 (375)
||.+-+--++.++.
T Consensus 86 G~aahLpGvvAa~T 99 (181)
T 4b4k_A 86 GGAAHLPGMVAAKT 99 (181)
T ss_dssp CSSCCHHHHHHTTC
T ss_pred cccccchhhHHhcC
Confidence 99999888886653
No 35
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=51.27 E-value=20 Score=34.58 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=51.7
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
++++|+.++... ++.+++...|...+. +........+ ........+++.+.+.+ ....+.+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~-----~~~~~v~~~L~~~g~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~--~~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLA-----ETAEEIRKRLAGKGVDAHRIEIPDAE-AGKDLPVVGFIWEVLGR--IGIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGH-----HHHHHHHHHHHHTTCEEEEEECCSGG-GGGBHHHHHHHHHHHHH--HTCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHH-----HHHHHHHHHHHhcCCcceEEEeCCCC-CCCCHHHHHHHHHHHHH--cCCCCCcEEEEECC-hH
Confidence 789999987643 245777778876542 2221111111 00112234444332210 11345688999988 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
+..+...+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 888887665322 14689999996
No 36
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=50.91 E-value=40 Score=32.26 Aligned_cols=100 Identities=13% Similarity=0.248 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eE-EeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~d-l~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGD 157 (375)
.++++|+..+..-. ..+.+++...|....+ +. +....|.. .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~livtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 97 (386)
T 1rrm_A 31 YQKALIVTDKTLVQ---CGVVAKVTDKMDAAGLAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG- 97 (386)
T ss_dssp CCEEEEECBHHHHH---TTHHHHHHHHHHHTTCEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECcchhh---chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 36788887654311 1256777777865442 21 22222222 1233444443321 235689999998
Q ss_pred hHHHHHHHHHhhcccC--------------CCCCCCcEEEeeC--CCccch
Q 017217 158 GTVGWVLGSVGELNKQ--------------GREPVPPVAIIPL--GTGNDL 192 (375)
Q Consensus 158 GTV~eVln~L~~~~~~--------------~~~~~~plgiIPl--GTGNdl 192 (375)
|++..+...+...... .....+|+..||. |||-..
T Consensus 98 Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 98 GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 7787777665432100 0124789999996 665443
No 37
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=49.96 E-value=82 Score=27.01 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=44.6
Q ss_pred CCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017217 92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (375)
Q Consensus 92 G~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~-~~~Ivv~GGDGTV~eVln~L~ 168 (375)
|+..-....++....|...++ |++.+...+. .+....++++++. .+. .-.|.++||.+-+--++.++.
T Consensus 14 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~LpgvvA~~t 83 (169)
T 3trh_A 14 GSDSDLSTMETAFTELKSLGIPFEAHILSAHR----TPKETVEFVENAD-----NRGCAVFIAAAGLAAHLAGTIAAHT 83 (169)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHH-----HTTEEEEEEEECSSCCHHHHHHHTC
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHH-----hCCCcEEEEECChhhhhHHHHHhcC
Confidence 433334566777788877776 8888765432 3556677766542 122 246777899999999998774
No 38
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=49.60 E-value=21 Score=33.86 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
.++++|+.++..... ..+++...|....+ +.......+ ........+++.+.+.+ ....+.+.||++|| |+
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~-~~~~~~~~e-~~k~~~~v~~~~~~~~~--~~~~r~d~iIavGG-Gs 96 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEV-RVCVIESGE-KYKNFHSLERILNNAFE--MQLNRHSLMIALGG-GV 96 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCE-EEEEECSSG-GGCSHHHHHHHHHHHHH--TTCCTTCEEEEEES-HH
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCc-EEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCceEEEECC-hH
Confidence 468889988654332 45677777754432 221111111 00012234444433211 11344588998887 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
+..+...+.... ...+|+..||.
T Consensus 97 v~D~ak~~A~~~----~rgip~i~IPT 119 (343)
T 3clh_A 97 ISDMVGFASSIY----FRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCCEEEeCC
Confidence 888877665322 25789999994
No 39
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=47.68 E-value=33 Score=32.67 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=53.1
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDGT 159 (375)
++++|+..+.+-. .+.+++...|....+ +.+....+.. + ....+++.+.+. ..+.|.||++|| |+
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~--~--~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 97 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEA--S--RNEVERIANIAR-----KAEAAIVIGVGG-GK 97 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSC--B--HHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCC--C--HHHHHHHHHHHH-----hcCCCEEEEeCC-hH
Confidence 7888888765432 356777777765442 2212211111 1 123344433221 234689999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC--CCccch
Q 017217 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDL 192 (375)
Q Consensus 160 V~eVln~L~~~~~~~~~~~~plgiIPl--GTGNdl 192 (375)
+..+...+.-. ..+|+..||. |||--.
T Consensus 98 v~D~aK~iA~~------~~~p~i~IPTTa~tgSev 126 (370)
T 1jq5_A 98 TLDTAKAVADE------LDAYIVIVPTAASTDAPT 126 (370)
T ss_dssp HHHHHHHHHHH------HTCEEEEEESSCCSSCTT
T ss_pred HHHHHHHHHHh------cCCCEEEeccccCCCccc
Confidence 88888777632 3689999996 555433
No 40
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=46.24 E-value=54 Score=32.41 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=54.5
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
.++++|+..+.+-. .+.+++...|....+ +.+....+.. .....+++.+.+ +. +.|.||++|| |
T Consensus 91 ~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~----~~~~v~~~~~~~----~~--~~D~IIAvGG-G 155 (450)
T 1ta9_A 91 TKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEA----SLVELDKLRKQC----PD--DTQVIIGVGG-G 155 (450)
T ss_dssp SSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCC----CHHHHHHHHTTS----CT--TCCEEEEEES-H
T ss_pred CCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCC----CHHHHHHHHHHH----hh--CCCEEEEeCC-c
Confidence 34888888765432 255677777765442 2212211111 112344544432 22 6789999988 7
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeC--CCccchh
Q 017217 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (375)
Q Consensus 159 TV~eVln~L~~~~~~~~~~~~plgiIPl--GTGNdlA 193 (375)
++..+...+.-. ..+|+..||. |||--..
T Consensus 156 SviD~AK~iA~~------~giP~I~IPTTAgtgSevt 186 (450)
T 1ta9_A 156 KTMDSAKYIAHS------MNLPSIICPTTASSDAATS 186 (450)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEESSCSCSCTTC
T ss_pred HHHHHHHHHHHh------cCCCEEEEeCCCccCcccC
Confidence 888888777642 4689999996 5554443
No 41
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=46.15 E-value=27 Score=33.19 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=50.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCee-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017217 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVF-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (375)
Q Consensus 80 ~~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~-dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGDG 158 (375)
.++++|+.++.. .+ +.+++...|. ..+. .+....|.. ......++.+.+.+ ...++.+.||++|| |
T Consensus 28 ~~kvliVtd~~v----~~-~~~~v~~~L~-~~~~~~~~~ge~~~----~~~~v~~~~~~~~~--~~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRV----EG-FAQEVAKALG-VRHLLGLPGGEAAK----SLEVYGKVLSWLAE--KGLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGG----HH-HHHHHHHHHT-CCCEEEECCSGGGS----SHHHHHHHHHHHHH--HTCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcH----HH-HHHHHHHHhc-cCeEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCCEEEEECC-c
Confidence 478999988643 23 6677777775 2221 111111111 12334444332210 11345688998887 7
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 159 TV~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
++..+...+.... ...+|+..||.
T Consensus 95 sv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh----ccCCCEEEecC
Confidence 8888887776421 25789999997
No 42
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=44.97 E-value=5.8 Score=32.34 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=27.5
Q ss_pred heehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
.++..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~ 106 (144)
T 3s4e_A 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNS 106 (144)
T ss_dssp HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 345666777788 999999999999999999874
No 43
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=44.93 E-value=6.7 Score=34.00 Aligned_cols=32 Identities=13% Similarity=-0.070 Sum_probs=27.0
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..| |||..|..|+..++.+||...
T Consensus 110 I~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 110 IHAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 35566677888 999999999999999999864
No 44
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=43.61 E-value=30 Score=32.80 Aligned_cols=41 Identities=29% Similarity=0.266 Sum_probs=31.9
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhh
Q 017217 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (375)
Q Consensus 146 ~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr 194 (375)
.+-+.++++|||||..-+ +.|.+ ..+++--||-==-||+.-
T Consensus 93 ~~Id~LvvIGGdgS~~~a-~~L~~-------~~i~vvgiPkTIDNDl~~ 133 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGA-MRLTE-------MGFPCIGLPGTIDNDIKG 133 (320)
T ss_dssp TTCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEBCTTCCCTT
T ss_pred cCCCEEEEECCCchHHHH-HHHHh-------hCCCEEEEeccccCCCCC
Confidence 356799999999998754 44544 367888899988999973
No 45
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=43.15 E-value=7.1 Score=32.76 Aligned_cols=32 Identities=6% Similarity=-0.198 Sum_probs=26.5
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..+ |||..|..|+..++.+||...
T Consensus 80 I~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 80 IIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 34555667777 999999999999999999864
No 46
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=42.66 E-value=7.7 Score=31.49 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.2
Q ss_pred heehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
.++..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 ~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 73 YIDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 345666677778 999999999999999999874
No 47
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=39.57 E-value=1.2e+02 Score=28.95 Aligned_cols=45 Identities=24% Similarity=0.279 Sum_probs=29.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccch
Q 017217 147 QKMRIVVAGGDGTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDL 192 (375)
Q Consensus 147 ~~~~Ivv~GGDGTV~eVln~L~~~~~------------~~~~~~~plgiIPl--GTGNdl 192 (375)
+.|.||++|| |++..+...+..... ....+.+|+..||. |||--.
T Consensus 109 ~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagtgSev 167 (375)
T 3rf7_A 109 LPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPTVSGTGAEA 167 (375)
T ss_dssp CCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEESSCSSCTTT
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcCCCccchhh
Confidence 3789999999 888887776643210 00124689999995 454433
No 48
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=37.96 E-value=8.8 Score=31.23 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=26.3
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..+ |||.-|..|+-.++.+||...
T Consensus 74 i~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 74 ISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 34555667778 999999999999999999864
No 49
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=36.69 E-value=30 Score=32.79 Aligned_cols=41 Identities=22% Similarity=0.152 Sum_probs=31.4
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhh
Q 017217 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (375)
Q Consensus 146 ~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr 194 (375)
.+-+.++++|||||..-+ +.|.+ ..+++--||-==-||+.-
T Consensus 92 ~~Id~LvvIGGdgS~~~a-~~L~~-------~~i~vvgiPkTIDNDl~~ 132 (319)
T 1zxx_A 92 HGIDAVVVIGGDGSYHGA-LQLTR-------HGFNSIGLPGTIDNDIPY 132 (319)
T ss_dssp TTCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEEETTCCCTT
T ss_pred hCCCEEEEECCchHHHHH-HHHHH-------hCCCEEEEeecccCCCCC
Confidence 356799999999998654 44544 357888899988899973
No 50
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=34.96 E-value=90 Score=31.33 Aligned_cols=44 Identities=27% Similarity=0.284 Sum_probs=30.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhc-ccCCCCCCCcEEEeeCCCccchh
Q 017217 147 QKMRIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 193 (375)
Q Consensus 147 ~~~~Ivv~GGDGTV~eVln~L~~~-~~~~~~~~~plgiIPlGTGNdlA 193 (375)
+-+.++++|||||..-+. .|.+. ... ...+++--||-==-||+.
T Consensus 189 ~Id~LvvIGGdgS~~~A~-~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGAL-VISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp TCSEEEEEECHHHHHHHH-HHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CCCEEEEeCCCchHHHHH-HHHHHHHHh--CCCceEEeccccccCCCC
Confidence 567999999999987443 23211 011 246889999998899996
No 51
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=34.07 E-value=11 Score=30.72 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=25.8
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..+ |||.-|..|+-.++.+||...
T Consensus 76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~~ 108 (149)
T 1zzw_A 76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKH 108 (149)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 34555567777 999999999999999999853
No 52
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=33.18 E-value=12 Score=31.21 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=25.3
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 83 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 83 EAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4455566777 999999999999999999864
No 53
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=33.09 E-value=11 Score=30.66 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=26.1
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..+ |||.-|..|+-.++.+||...
T Consensus 82 i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 82 ALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 34555666677 999999999999999999874
No 54
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=31.89 E-value=12 Score=31.28 Aligned_cols=31 Identities=16% Similarity=0.018 Sum_probs=25.4
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..+..+ |||.-|..|+-.++.+||...
T Consensus 77 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 77 HECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 4445567777 999999999999999999864
No 55
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=31.12 E-value=14 Score=31.80 Aligned_cols=31 Identities=13% Similarity=-0.078 Sum_probs=25.5
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 91 ~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 91 HSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4555567778 999999999999999999764
No 56
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=30.77 E-value=1.1e+02 Score=30.11 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=47.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC--cEEEEEcCc
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~--~~Ivv~GGD 157 (375)
.++.||. |+..-....+.....|...++ |++.+...+. .+....++++++. .... -.|.++||.
T Consensus 266 ~~V~Ii~----gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR----~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLM----GSTSDLGHCEKIKKACGNFGIPCELRVTSAHK----GPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEe----cCcccHHHHHHHHHHHHHcCCceEEeeeeccC----CHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 3455554 333334466777777877766 8887765332 3556777776542 1222 367777999
Q ss_pred hHHHHHHHHHh
Q 017217 158 GTVGWVLGSVG 168 (375)
Q Consensus 158 GTV~eVln~L~ 168 (375)
|.+--|+.++.
T Consensus 333 a~Lpgvva~~t 343 (425)
T 2h31_A 333 NGLGPVMSGNT 343 (425)
T ss_dssp CCHHHHHHHHC
T ss_pred cchHhHHhccC
Confidence 99999998885
No 57
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=30.39 E-value=14 Score=31.14 Aligned_cols=31 Identities=13% Similarity=0.012 Sum_probs=24.8
Q ss_pred ehhhhc-Ccce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGC-GLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~-~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..++. |..+ |||..|..|+-.++.+||...
T Consensus 108 ~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 108 DQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 344444 6677 999999999999999999864
No 58
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=30.21 E-value=12 Score=26.82 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.6
Q ss_pred cEEEEEcCchHH
Q 017217 149 MRIVVAGGDGTV 160 (375)
Q Consensus 149 ~~Ivv~GGDGTV 160 (375)
.-|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 469999999997
No 59
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=29.81 E-value=16 Score=32.33 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=26.3
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 76 I~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 76 IDCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 34555667778 999999999999999999864
No 60
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=29.66 E-value=1.6e+02 Score=26.88 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=22.5
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017217 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (375)
Q Consensus 146 ~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPl 186 (375)
...|.+|..|| +|+.|++. ...|.-++|.
T Consensus 224 ~~aDlvI~~gG-~T~~E~~~-----------~g~P~i~ip~ 252 (282)
T 3hbm_A 224 NESNKLIISAS-SLVNEALL-----------LKANFKAICY 252 (282)
T ss_dssp HTEEEEEEESS-HHHHHHHH-----------TTCCEEEECC
T ss_pred HHCCEEEECCc-HHHHHHHH-----------cCCCEEEEeC
Confidence 34578899999 99999973 4577778885
No 61
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=29.51 E-value=31 Score=32.76 Aligned_cols=93 Identities=11% Similarity=0.103 Sum_probs=47.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEe---eecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v~dl~---~~~p~~~~t~~~~~a~~la~~~~~~~~~~~~~~~Ivv~GGD 157 (375)
++++|+.++... +...+++...| ....+++. ...+.. .....+++.+.+.+ ...++.+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p----~~~~v~~~~~~~~~--~~~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTK----TFEQYQETLEYILS--HHVTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGC----SHHHHHHHHHHHHT--TCCCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCceEEEECC-
Confidence 678888876422 22556676666 43212211 121211 12233444332210 11233488998988
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeC--CCc
Q 017217 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL--GTG 189 (375)
Q Consensus 158 GTV~eVln~L~~~~~~~~~~~~plgiIPl--GTG 189 (375)
|++..+...+.... ...+|+..||. +|+
T Consensus 100 Gsv~D~ak~vA~~~----~rgip~i~IPTT~~a~ 129 (354)
T 1xah_A 100 GATGDFAGFVAATL----LRGVHFIQVPTTILAH 129 (354)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEECSTTHH
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEECCccccc
Confidence 78888887776432 25789999997 454
No 62
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=29.50 E-value=15 Score=29.95 Aligned_cols=31 Identities=13% Similarity=-0.006 Sum_probs=24.8
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 84 ~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~~ 115 (154)
T 2r0b_A 84 DGSLQMGGKVLVHGNAGISRSAAFVIAYIMET 115 (154)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCChHHHHHHHHHHHH
Confidence 3445566777 999999999999999998753
No 63
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=28.60 E-value=15 Score=31.07 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=26.5
Q ss_pred heehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
.++..+..+..+ |||.-|..|+-.++.+||...
T Consensus 100 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~ 133 (176)
T 3cm3_A 100 FLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSK 133 (176)
T ss_dssp HHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHH
Confidence 345555566677 999999999999999999864
No 64
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=27.92 E-value=16 Score=32.31 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=24.8
Q ss_pred ehhh-hcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIR-GCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~-~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+ ..|..| |||..|..|+-.++.+||...
T Consensus 132 ~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 132 DRALSDDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp HHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3444 456667 999999999999999999864
No 65
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=27.32 E-value=40 Score=31.86 Aligned_cols=40 Identities=28% Similarity=0.284 Sum_probs=30.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhh
Q 017217 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (375)
Q Consensus 147 ~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr 194 (375)
+-+.++++|||||..-+ +.|.+ ..+++--||-==-||+.-
T Consensus 93 ~Id~L~~IGGdgS~~~a-~~l~~-------~~i~vigiPkTIDNDl~~ 132 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGA-KKLTE-------HGFPCVGVPGTIDNDIPG 132 (319)
T ss_dssp TCCEEEEEECTTHHHHH-HHHHH-------TTCCEEEEEEETTCCCTT
T ss_pred CCCEEEEeCCcHHHHHH-HHHhc-------cCCcEEEeeccccCCCCC
Confidence 56789999999998754 34543 357888889888899963
No 66
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=27.15 E-value=19 Score=33.31 Aligned_cols=13 Identities=46% Similarity=0.917 Sum_probs=11.1
Q ss_pred cEEEEEcCchHHH
Q 017217 149 MRIVVAGGDGTVG 161 (375)
Q Consensus 149 ~~Ivv~GGDGTV~ 161 (375)
.++|+|||+||-+
T Consensus 47 q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 47 QRIIFCGGEGTSS 59 (275)
T ss_dssp CEEEEESSSSSST
T ss_pred cEEEEecCCCCCC
Confidence 5999999999854
No 67
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=26.89 E-value=17 Score=29.95 Aligned_cols=31 Identities=13% Similarity=-0.079 Sum_probs=25.1
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 79 ~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 79 DEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 4445567777 999999999999999999753
No 68
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=26.49 E-value=17 Score=29.53 Aligned_cols=26 Identities=15% Similarity=-0.008 Sum_probs=22.2
Q ss_pred cCcce-eEecccccccccchhhhhhHH
Q 017217 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 23 ~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
.+..+ |||.-|..|+-.++.+||...
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 56667 999999999998888998764
No 69
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=26.39 E-value=17 Score=30.78 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.4
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (375)
++..+..|..+ |||.-|..|+-.++.+||..
T Consensus 80 i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 80 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 34555567777 99999999999999999985
No 70
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=26.32 E-value=76 Score=27.43 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=23.8
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 148 ~~~Ivv~GGD-GTV~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
...||..||. |-...+..+..+. ....+||+|-+
T Consensus 33 g~~lV~GGg~~GiM~aa~~gA~~~------gG~~iGv~p~~ 67 (191)
T 1t35_A 33 GIGLVYGGSRVGLMGTIADAIMEN------GGTAIGVMPSG 67 (191)
T ss_dssp TCEEEECCCCSHHHHHHHHHHHTT------TCCEEEEEETT
T ss_pred CCEEEECCCcccHHHHHHHHHHHc------CCeEEEEeCch
Confidence 4455555666 8777777777652 45789999976
No 71
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=25.78 E-value=21 Score=29.37 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=24.6
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..+..+ |||.-|..|+-.++.+||...
T Consensus 78 ~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 4444557777 999999999998888998653
No 72
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=25.57 E-value=83 Score=26.94 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=25.3
Q ss_pred CCcEEEEEcC-chHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 147 QKMRIVVAGG-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 147 ~~~~Ivv~GG-DGTV~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
....||..|| -|-...+..+..+. ....+||||-.
T Consensus 44 ~g~~lVsGGg~~Gim~aa~~gAl~~------gG~tigVlP~~ 79 (176)
T 2iz6_A 44 HGWILLTGGRSLGVMHEAMKGAKEA------GGTTIGVLPGP 79 (176)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHT------TCCEEEEECC-
T ss_pred CCCEEEECCCccCHhHHHHHHHHHc------CCEEEEEeCch
Confidence 4567888888 78777777777653 35689999965
No 73
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.51 E-value=69 Score=27.86 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=22.9
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 148 ~~~Ivv~GGD-GTV~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
...||..||. |-...+..+..+. -...+||+|--
T Consensus 44 g~~lv~GGG~~GlM~a~~~ga~~~------GG~viGv~p~~ 78 (189)
T 3sbx_A 44 GWTLVWGGGHVSAMGAVSSAARAH------GGWTVGVIPKM 78 (189)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHTT------TCCEEEEEETT
T ss_pred CCEEEECCCccCHHHHHHHHHHHc------CCcEEEEcCch
Confidence 3455555567 8777777777652 45789999963
No 74
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=25.15 E-value=25 Score=27.92 Aligned_cols=55 Identities=11% Similarity=0.199 Sum_probs=29.3
Q ss_pred cceecccCCCchhhhhhhhheeEe-ccc--cCCccEEEEeCCCCc--------------------eEEEEeCCcccCC
Q 017217 320 GWFLTPCISDPNLRGLKNILRMHV-KKV--NCSEWEQVAVPKRWS--------------------SNIWCEGNSCFES 374 (375)
Q Consensus 320 ~~~~ap~~~~~~~~~l~~~~~l~~-~~v--~~~~~~~i~i~~~~~--------------------~iv~ldges~~~~ 374 (375)
-..||+|+..|+.+....-++--+ +|. ..+..+-|.|....+ =+|.+|||..+||
T Consensus 16 e~iCASCVnaPSSkeTyEWLqAal~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPlV~indeiVaEG 93 (111)
T 1xg8_A 16 DVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADG 93 (111)
T ss_dssp SSCCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSEEEETTEEEEES
T ss_pred cccchhccCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceEEEECCEEeecC
Confidence 348999999875544333222211 111 234445555543322 2788888877776
No 75
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=25.14 E-value=19 Score=28.85 Aligned_cols=31 Identities=16% Similarity=0.026 Sum_probs=24.7
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
+..+..+..+ |||.-|..|+-.++..||...
T Consensus 83 ~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~ 114 (151)
T 2img_A 83 DEANARGEAVGVHCALGFGRTGTMLACYLVKE 114 (151)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 3444456666 999999999999999998764
No 76
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.72 E-value=77 Score=28.11 Aligned_cols=33 Identities=33% Similarity=0.532 Sum_probs=23.4
Q ss_pred CCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEee
Q 017217 147 QKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIP 185 (375)
Q Consensus 147 ~~~~Ivv~GGD-GTV~eVln~L~~~~~~~~~~~~plgiIP 185 (375)
....||..||. |-...+..+..+. -...+||+|
T Consensus 40 ~g~~lV~GGg~~GlM~aa~~gA~~~------GG~~iGv~p 73 (216)
T 1ydh_A 40 RKIDLVYGGGSVGLMGLISRRVYEG------GLHVLGIIP 73 (216)
T ss_dssp TTCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEE
T ss_pred CCCEEEECCCcccHhHHHHHHHHHc------CCcEEEEec
Confidence 34567777777 7777777777653 457899999
No 77
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=23.91 E-value=61 Score=27.53 Aligned_cols=41 Identities=24% Similarity=0.242 Sum_probs=25.1
Q ss_pred EEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhC
Q 017217 152 VVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFG 197 (375)
Q Consensus 152 vv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~Lg 197 (375)
..+|||-|- +++.-+... -...+|-+-+|=+|| ||+++..+
T Consensus 56 ~Gi~G~tt~-~~l~r~~~~---v~~~~Pd~vvi~~G~-ND~~~~~~ 96 (209)
T 4hf7_A 56 RGISGQTSY-QFLLRFRED---VINLSPALVVINAGT-NDVAENTG 96 (209)
T ss_dssp EECTTCCHH-HHHHHHHHH---TGGGCCSEEEECCCH-HHHTTSSS
T ss_pred eccCcccHH-HHHHHHHHH---HHhcCCCEEEEEeCC-CcCccccc
Confidence 356888664 444444321 012457788888887 99887554
No 78
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=23.67 E-value=22 Score=30.89 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=22.5
Q ss_pred cCcce-eEecccccccccchhhhhhHH
Q 017217 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 23 ~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
.|..| |||..|..|+-.++.+||...
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~ 156 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIY 156 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 45667 999999999999999999863
No 79
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=23.17 E-value=20 Score=28.92 Aligned_cols=30 Identities=17% Similarity=0.027 Sum_probs=24.4
Q ss_pred ehhhhcCcce-eEecccccccccchhhhhhH
Q 017217 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (375)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (375)
+..+..+..+ |||.-|..|+-.++..||..
T Consensus 82 ~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 82 DEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 4444556666 99999999999999999876
No 80
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=22.40 E-value=48 Score=33.86 Aligned_cols=46 Identities=22% Similarity=0.201 Sum_probs=31.4
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017217 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (375)
Q Consensus 146 ~~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlA 193 (375)
.+-+.++++|||||..-+. .|.+... .....+++--||-==-||++
T Consensus 165 ~~Id~LvvIGGdgS~~~A~-~L~e~~~-~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 165 NNLNAIIIIGGDDSNTNAA-ILAEYFK-KNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp TTCSEEEEEESHHHHHHHH-HHHHHHH-HTTCCCEEEEEEEETTCCCC
T ss_pred cCCCEEEEeCCCcHHHHHH-HHHHHHH-HhCCCCcEEEeccccCCCCC
Confidence 3567999999999986543 3332110 01246889999988889996
No 81
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=22.33 E-value=25 Score=30.21 Aligned_cols=32 Identities=16% Similarity=-0.022 Sum_probs=25.3
Q ss_pred eehhhhcCcce-eEecccccccccchhhhhhHH
Q 017217 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (375)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (375)
++..+..+..+ |||..|..|+-.++.+||...
T Consensus 96 i~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~~ 128 (190)
T 2wgp_A 96 IHSVSRKHGATLVHCAAGVSRSATLCIAYLMKF 128 (190)
T ss_dssp HHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHH
Confidence 34444556677 999999999999989998864
No 82
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=22.16 E-value=2.8e+02 Score=22.75 Aligned_cols=28 Identities=25% Similarity=0.480 Sum_probs=20.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhc
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKE 110 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~ 110 (375)
++++||+=..+| ..+++.+.|.+.|...
T Consensus 1 Mki~IvY~S~tG--nT~~iA~~Ia~~l~~~ 28 (175)
T 1ag9_A 1 AITGIFFGSDTG--NTENIAKMIQKQLGKD 28 (175)
T ss_dssp CCEEEEECCSSS--HHHHHHHHHHHHHCTT
T ss_pred CEEEEEEECCCc--hHHHHHHHHHHHhccC
Confidence 357788766655 4568889998888654
No 83
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.53 E-value=91 Score=27.31 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=23.5
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 148 ~~~Ivv~GGD-GTV~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
...||..||. |-...+..+..+. -...+||+|-.
T Consensus 53 g~~lV~GGG~~GlM~a~~~gA~~~------GG~viGv~p~~ 87 (199)
T 3qua_A 53 GWTLVSGGGNVSAMGAVAQAARAK------GGHTVGVIPKA 87 (199)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHHT------TCCEEEEEEGG
T ss_pred CCEEEECCCccCHHHHHHHHHHHc------CCcEEEEeCch
Confidence 3456666676 8777777777652 45789999963
No 84
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=21.40 E-value=1.7e+02 Score=32.00 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=32.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhh
Q 017217 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR 194 (375)
Q Consensus 147 ~~~~Ivv~GGDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr 194 (375)
+-+.++++|||||..-+ ..|.+.........+|+--||-==-||+.-
T Consensus 688 ~Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~g 734 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVPG 734 (989)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCTT
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCCC
Confidence 56899999999998543 455432111111368888999988999963
No 85
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.89 E-value=1.1e+02 Score=27.13 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=23.6
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017217 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (375)
Q Consensus 148 ~~~Ivv~GGD-GTV~eVln~L~~~~~~~~~~~~plgiIPlG 187 (375)
...||..||. |-...+..+..+. ....+||||..
T Consensus 45 G~~vVsGGg~~GiM~aa~~gAl~~------GG~tiGVlP~~ 79 (215)
T 2a33_A 45 NIDLVYGGGSIGLMGLVSQAVHDG------GRHVIGIIPKT 79 (215)
T ss_dssp TCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEESS
T ss_pred CCEEEECCChhhHhHHHHHHHHHc------CCcEEEEcchH
Confidence 3456666776 8777777776652 45789999964
No 86
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=20.28 E-value=3.7e+02 Score=22.28 Aligned_cols=104 Identities=19% Similarity=0.103 Sum_probs=54.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecc---hhHHHHHHhccchhhhccCCCcEEEEEc-
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYG---LACLEKLAELGDFCAKDTRQKMRIVVAG- 155 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~---~~~a~~la~~~~~~~~~~~~~~~Ivv~G- 155 (375)
++-+.|..|-.|+.+.....+++.+.|.+.+. +... ..+.+....+ .+...++.+. ....+...|.||+..
T Consensus 2 ~mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G~Vl~~h-v~~~~l~~~g~~~~~~~~~i~~~---d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 2 RRSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEH-VADAELEPLGEEAAGGDQFIHEQ---NLNWLQQADVVVAEVT 77 (152)
T ss_dssp -CEEEEECCSTTCCTTHHHHHHHHHHHTTTSEECCCC--------------CCCHHHHHHH---HHHHHHHCSEEEEECS
T ss_pred CceEEEECCCCCcHHHHHHHHHHHHHHHHcCcccccc-cCchhhhhccccccCCHHHHHHH---HHHHHHHCCEEEEeCC
Confidence 44567888998876655677899999977652 2211 1111100000 0112222221 112355678888876
Q ss_pred --CchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhh
Q 017217 156 --GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRS 195 (375)
Q Consensus 156 --GDGTV~eVln~L~~~~~~~~~~~~plgiIPlGTGNdlAr~ 195 (375)
..||.-|+-=+... ..|.+++..--++++++.-
T Consensus 78 ~~d~Gt~~EiG~A~al-------gkPV~~l~~~~~~~~ls~m 112 (152)
T 4fyk_A 78 QPSLGVGYELGRAVAL-------GKPILCLFRPQSGRVLSAM 112 (152)
T ss_dssp SCCHHHHHHHHHHHHT-------TCCEEEEECGGGSCCCCHH
T ss_pred CCCCCHHHHHHHHHHc-------CCeEEEEEeCCccchhHHH
Confidence 45999888655542 3455666654455666533
No 87
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=20.13 E-value=2.6e+02 Score=22.49 Aligned_cols=28 Identities=25% Similarity=0.455 Sum_probs=19.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhc
Q 017217 81 APMVVFINSRSGGRHGPELKERLQELMGKE 110 (375)
Q Consensus 81 ~~llviiNP~SG~~~g~~~~~~l~~~L~~~ 110 (375)
++++|++=..+| ..+++.+.|.+.|...
T Consensus 1 ~kilIvY~S~tG--nT~~vA~~ia~~l~~~ 28 (169)
T 1czn_A 1 AKIGLFYGTQTG--VTQTIAESIQQEFGGE 28 (169)
T ss_dssp CCEEEEECCSSS--HHHHHHHHHHHHHTST
T ss_pred CeEEEEEECCCc--HHHHHHHHHHHHhCcc
Confidence 357777765554 5568888998888653
Done!