BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017220
MKPQPDVQGHPGTMMAFQEDYVVNNELQGHCFQGFDKCEDSASGLHNPTVGISGLTTQLD
YSHLIFRQELENLLLDGVNGTEECEKDIGPNSLPIIHPPPSAFMGPKCALWDCTRPALGS
ELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGA
ATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKL
VMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKD
SLADLQKKMGRLTADVPVDNKSSFKGKIETNGKVDSANVNSSQNEMTSATEILHHGSSSP
YKYLADNSADYYHKY

High Scoring Gene Products

Symbol, full name Information P value
VOZ1
AT1G28520
protein from Arabidopsis thaliana 2.2e-96
VOZ2
AT2G42400
protein from Arabidopsis thaliana 1.7e-91

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017220
        (375 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018738 - symbol:VOZ1 "AT1G28520" species:3702...   958  2.2e-96   1
TAIR|locus:2053786 - symbol:VOZ2 "AT2G42400" species:3702...   912  1.7e-91   1


>TAIR|locus:2018738 [details] [associations]
            symbol:VOZ1 "AT1G28520" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0009610 "response to symbiotic fungus" evidence=RCA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0048574 "long-day
            photoperiodism, flowering" evidence=IMP] [GO:0048578 "positive
            regulation of long-day photoperiodism, flowering" evidence=IMP]
            PROSITE:PS50103 EMBL:CP002684 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC010155
            EMBL:AC007508 EMBL:AB125256 EMBL:BT020261 EMBL:AK227014
            EMBL:AK317006 IPI:IPI00545506 PIR:B86411 RefSeq:NP_001077618.1
            RefSeq:NP_174174.1 UniGene:At.40873 IntAct:Q9SGQ0
            EnsemblPlants:AT1G28520.1 EnsemblPlants:AT1G28520.2 GeneID:839752
            KEGG:ath:AT1G28520 TAIR:At1g28520 HOGENOM:HOG000030392
            InParanoid:Q9SGQ0 OMA:HLPHSEN PhylomeDB:Q9SGQ0
            ProtClustDB:CLSN2679633 Genevestigator:Q9SGQ0 Uniprot:Q9SGQ0
        Length = 486

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 206/388 (53%), Positives = 245/388 (63%)

Query:     2 KPQPDVQG-HPGTMMAFQEDYVVNNELQGHCFQGF---DKCEDSASGLHNPTVGISGLTT 57
             KP+P  Q    G    FQ  Y   N +QG    G    D C+D +    N   G + L  
Sbjct:   109 KPEPADQNLEAGKAAVFQRGY---NLVQGKSEHGLPLVDNCKDLSLAAGNNFDGTAPLEY 165

Query:    58 QLDYSHLIFRQELENLLLDGVNGTEECEKDIGP----NSLPIIHPPPSAFMGPKCALWDC 113
                Y     +QE E     G N         GP    N +P I PPPSAF+GPKCALWDC
Sbjct:   166 HQQYD---LQQEFEPNFNGGFNNCPSYGVVEGPIHISNFIPTICPPPSAFLGPKCALWDC 222

Query:   114 TRPALGSELFEDYCSNFHATLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVG 173
              RPA G + F+DYCS+FHA LA +E  PG+ PV+RPGGI LKD LLF A++A+A GK VG
Sbjct:   223 PRPAQGFDWFQDYCSSFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFAALSAKAGGKDVG 282

Query:   174 IPHCEGAATTKSPWNATELFDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRG 233
             IP CEGAAT KSPWNA ELFDL +LE ET+REWLFFDK R+AFESG RKQRSLPD++GRG
Sbjct:   283 IPECEGAATAKSPWNAPELFDLTVLESETLREWLFFDKPRRAFESGNRKQRSLPDYNGRG 342

Query:   234 WHESRKLVMKEFGGQKRSYYMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSP 293
             WHESRK +M EFGG KRSYYMDPQP    EWHLYEYEI   DA ALYRLE+KL   KK+ 
Sbjct:   343 WHESRKQIMVEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCDACALYRLELKLVDGKKTS 402

Query:   294 KVKVTKDSLADLQKKMGRLTADVPVDN---------KSSFKGKIETNGKVDSANVNSSQN 344
             K KV+ DS+ADLQK+MGRLTA+ P +N         K   KG+ + + KV + NV   QN
Sbjct:   403 KGKVSNDSVADLQKQMGRLTAEFPPENNTTNTTNNNKRCIKGRPKVSTKVATGNV---QN 459

Query:   345 EMTSATEILHHGSSSPYKYLADNSADYY 372
              +  A +   +G    + YL  N +DYY
Sbjct:   460 TVEQAND---YGVGEEFNYLVGNLSDYY 484


>TAIR|locus:2053786 [details] [associations]
            symbol:VOZ2 "AT2G42400" species:3702 "Arabidopsis
            thaliana" [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0048574 "long-day photoperiodism, flowering"
            evidence=IMP] [GO:0048578 "positive regulation of long-day
            photoperiodism, flowering" evidence=IMP] PROSITE:PS50103
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0006351
            GO:GO:0009585 GO:GO:0048578 GO:GO:0048574 EMBL:AC005956
            HOGENOM:HOG000030392 EMBL:AB125257 EMBL:AF361831 EMBL:AY078048
            IPI:IPI00519948 PIR:E84853 RefSeq:NP_565972.1 UniGene:At.28716
            IntAct:Q9SLB9 PaxDb:Q9SLB9 PRIDE:Q9SLB9 EnsemblPlants:AT2G42400.1
            GeneID:818841 KEGG:ath:AT2G42400 TAIR:At2g42400 eggNOG:NOG269595
            InParanoid:Q9SLB9 OMA:ITSQYDY PhylomeDB:Q9SLB9
            ProtClustDB:CLSN2917313 Genevestigator:Q9SLB9 Uniprot:Q9SLB9
        Length = 450

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 181/307 (58%), Positives = 224/307 (72%)

Query:    19 EDYVVNNELQG---HC-FQGFDKCEDSASGLHNPTVGIS-GLTTQLDYSHLIFRQELENL 73
             ED + + E  G   H  ++GFD   +SA   H+  +  +  +T+Q DY     RQEL+N 
Sbjct:   136 EDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDNS 195

Query:    74 LLDGVNGTEECEKDIGPNSLPI-IHPPPSAFMGPKCALWDCTRPALGSELFEDYCSNFHA 132
                 ++ +EE + +    S P  +  PPSAF+GPKCALWDCTRPA GSE + DYCSN+H 
Sbjct:   196 PSTKLDSSEEID-NFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLDYCSNYHG 254

Query:   133 TLAVSEDSPGLTPVLRPGGINLKDSLLFNAVNARAQGKRVGIPHCEGAATTKSPWNATEL 192
             TLA++EDSPG  PVLRPGGI+LKD+LL +A+ A+ QGK VGIP CEGA  TK PWNA EL
Sbjct:   255 TLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKCPWNAAEL 314

Query:   193 FDLALLEGETIREWLFFDKHRKAFESGTRKQRSLPDHSGRGWHESRKLVMKEFGGQKRSY 252
             F L L+EGETIREWLFFDK R+A++SG RKQRSLPD+SGRGWHESRK +MKE  GQKRSY
Sbjct:   315 FHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSY 374

Query:   253 YMDPQPSDGLEWHLYEYEIIGFDAYALYRLEVKLASEKKSPKVKVTKDSLADLQKKMG-- 310
             YMDPQP    EWHL+EY+I   DA ALYRLE+K+ + KKSPK K++KD LADLQKKMG  
Sbjct:   375 YMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADLQKKMGQF 434

Query:   311 RLTADVP 317
             ++ +D P
Sbjct:   435 KVASDKP 441


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      375       375   0.00088  117 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  269 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.48u 0.12s 33.60t   Elapsed:  00:00:01
  Total cpu time:  33.48u 0.12s 33.60t   Elapsed:  00:00:01
  Start:  Fri May 10 22:27:27 2013   End:  Fri May 10 22:27:28 2013

Back to top