Query 017221
Match_columns 375
No_of_seqs 318 out of 2302
Neff 11.7
Searched_HMMs 46136
Date Fri Mar 29 06:40:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017221.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017221hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 3.1E-44 6.7E-49 284.5 25.1 300 57-375 19-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 7.4E-37 1.6E-41 256.9 23.4 272 61-375 9-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 7.5E-36 1.6E-40 250.9 23.4 274 60-375 7-289 (295)
4 PRK00870 haloalkane dehalogena 100.0 1.2E-35 2.6E-40 250.3 23.8 263 60-375 19-301 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 1.1E-35 2.4E-40 254.9 23.6 283 62-374 63-356 (360)
6 PLN02578 hydrolase 100.0 2E-33 4.3E-38 240.8 27.4 121 62-187 68-188 (354)
7 TIGR02240 PHA_depoly_arom poly 100.0 2.3E-34 5E-39 239.4 18.7 258 62-374 4-265 (276)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 6.9E-33 1.5E-37 232.0 26.4 250 69-374 19-282 (282)
9 PRK03204 haloalkane dehalogena 100.0 7.1E-34 1.5E-38 236.6 20.1 268 60-373 14-286 (286)
10 PLN02965 Probable pheophorbida 100.0 4.8E-33 1E-37 228.6 22.2 245 82-374 5-252 (255)
11 PLN03087 BODYGUARD 1 domain co 100.0 7.2E-33 1.6E-37 239.9 22.0 278 60-374 176-478 (481)
12 PRK06489 hypothetical protein; 100.0 4.8E-32 1E-36 233.0 25.2 119 66-186 46-189 (360)
13 TIGR03056 bchO_mg_che_rel puta 100.0 1.3E-32 2.8E-37 230.2 20.4 266 62-373 8-278 (278)
14 PRK10349 carboxylesterase BioH 100.0 1.3E-32 2.8E-37 226.7 18.1 243 71-374 3-255 (256)
15 PLN02385 hydrolase; alpha/beta 100.0 5.5E-32 1.2E-36 232.0 20.7 124 63-187 65-198 (349)
16 PLN03084 alpha/beta hydrolase 100.0 5.7E-31 1.2E-35 224.2 24.6 264 64-374 109-383 (383)
17 PRK10749 lysophospholipase L2; 100.0 1.3E-30 2.9E-35 221.4 23.3 280 57-375 28-329 (330)
18 PRK10673 acyl-CoA esterase; Pr 100.0 1.5E-30 3.2E-35 214.6 22.5 239 79-375 15-255 (255)
19 TIGR03611 RutD pyrimidine util 100.0 8.2E-31 1.8E-35 216.7 19.2 252 73-374 2-257 (257)
20 PRK08775 homoserine O-acetyltr 100.0 1.6E-31 3.5E-36 228.4 15.0 122 60-187 36-174 (343)
21 PHA02857 monoglyceride lipase; 100.0 1.9E-30 4.2E-35 216.2 20.3 257 63-375 4-273 (276)
22 PRK11126 2-succinyl-6-hydroxy- 100.0 1.2E-30 2.7E-35 213.3 17.3 100 80-186 2-102 (242)
23 KOG4409 Predicted hydrolase/ac 100.0 2.4E-30 5.3E-35 206.1 17.7 287 49-374 54-363 (365)
24 PLN02298 hydrolase, alpha/beta 100.0 3.7E-30 7.9E-35 219.6 20.2 125 62-187 35-170 (330)
25 PLN02211 methyl indole-3-aceta 100.0 7.7E-30 1.7E-34 210.2 21.0 257 67-374 4-269 (273)
26 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.2E-30 4.7E-35 213.3 17.3 244 72-373 2-251 (251)
27 PRK07581 hypothetical protein; 100.0 3.9E-31 8.5E-36 226.3 13.0 281 66-375 22-336 (339)
28 KOG1454 Predicted hydrolase/ac 100.0 1.6E-30 3.5E-35 216.5 15.0 255 79-375 57-324 (326)
29 TIGR01738 bioH putative pimelo 100.0 6.2E-30 1.3E-34 209.8 15.8 234 78-372 1-245 (245)
30 TIGR03695 menH_SHCHC 2-succiny 100.0 1.4E-29 3E-34 208.4 17.1 250 80-373 1-251 (251)
31 TIGR01250 pro_imino_pep_2 prol 100.0 1.9E-28 4.1E-33 206.1 22.0 122 64-187 6-132 (288)
32 PLN02894 hydrolase, alpha/beta 100.0 7.9E-29 1.7E-33 214.5 19.9 106 79-188 104-213 (402)
33 TIGR01392 homoserO_Ac_trn homo 100.0 1.2E-29 2.6E-34 217.6 13.2 122 65-188 11-164 (351)
34 PRK14875 acetoin dehydrogenase 100.0 3.2E-28 6.9E-33 211.9 22.1 247 62-375 111-371 (371)
35 KOG1455 Lysophospholipase [Lip 100.0 2.2E-28 4.7E-33 191.3 18.5 267 62-375 30-312 (313)
36 PF12697 Abhydrolase_6: Alpha/ 100.0 5.1E-30 1.1E-34 207.8 9.9 102 83-187 1-102 (228)
37 COG2267 PldB Lysophospholipase 100.0 4E-28 8.6E-33 200.4 20.8 272 61-375 11-294 (298)
38 PRK00175 metX homoserine O-ace 100.0 5.2E-29 1.1E-33 215.0 14.1 122 65-188 28-184 (379)
39 PLN02652 hydrolase; alpha/beta 100.0 8E-28 1.7E-32 206.3 20.7 258 67-375 118-387 (395)
40 COG1647 Esterase/lipase [Gener 100.0 2.4E-28 5.1E-33 181.4 14.3 227 80-374 15-243 (243)
41 KOG2984 Predicted hydrolase [G 100.0 3E-28 6.5E-33 177.5 11.3 247 60-375 21-276 (277)
42 PLN02980 2-oxoglutarate decarb 100.0 4.2E-27 9.1E-32 233.4 20.3 112 72-186 1360-1480(1655)
43 TIGR01249 pro_imino_pep_1 prol 100.0 7.3E-27 1.6E-31 196.8 17.8 120 65-187 10-131 (306)
44 PRK05855 short chain dehydroge 99.9 8.8E-27 1.9E-31 215.1 19.1 120 62-183 5-128 (582)
45 PLN02511 hydrolase 99.9 2E-26 4.4E-31 198.8 19.1 249 79-374 99-364 (388)
46 KOG2382 Predicted alpha/beta h 99.9 2.5E-25 5.5E-30 177.4 19.0 258 79-375 51-313 (315)
47 TIGR01607 PST-A Plasmodium sub 99.9 3.4E-25 7.3E-30 187.5 20.3 122 66-187 4-186 (332)
48 PRK06765 homoserine O-acetyltr 99.9 2.2E-25 4.7E-30 190.5 15.2 284 66-374 37-387 (389)
49 PRK05077 frsA fermentation/res 99.9 1.7E-23 3.6E-28 181.3 23.7 218 79-375 193-412 (414)
50 PRK10985 putative hydrolase; P 99.9 5.2E-24 1.1E-28 180.5 17.7 246 80-374 58-319 (324)
51 PRK13604 luxD acyl transferase 99.9 6.6E-23 1.4E-27 165.8 20.0 122 63-188 13-143 (307)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 3.1E-22 6.8E-27 165.3 22.7 103 80-187 26-135 (274)
53 PLN02872 triacylglycerol lipas 99.9 2.7E-23 5.9E-28 177.6 15.9 304 58-375 42-389 (395)
54 PRK10566 esterase; Provisional 99.9 5.3E-22 1.2E-26 162.8 21.1 101 80-181 27-136 (249)
55 PRK11071 esterase YqiA; Provis 99.9 1E-21 2.2E-26 152.2 17.2 184 81-373 2-189 (190)
56 TIGR01836 PHA_synth_III_C poly 99.9 2.5E-21 5.4E-26 166.1 21.1 119 64-189 42-174 (350)
57 KOG2564 Predicted acetyltransf 99.9 3.6E-22 7.7E-27 153.7 12.7 122 62-185 50-181 (343)
58 TIGR01838 PHA_synth_I poly(R)- 99.9 8.8E-22 1.9E-26 172.8 16.7 270 66-362 170-462 (532)
59 PF12695 Abhydrolase_5: Alpha/ 99.9 2.6E-21 5.7E-26 145.0 13.0 93 82-184 1-93 (145)
60 PF00561 Abhydrolase_1: alpha/ 99.9 3.2E-22 6.9E-27 162.5 5.9 76 108-185 1-78 (230)
61 PRK11460 putative hydrolase; P 99.8 7.3E-20 1.6E-24 146.9 16.8 180 79-373 15-210 (232)
62 KOG4391 Predicted alpha/beta h 99.8 1.5E-20 3.2E-25 139.2 11.1 215 63-374 58-281 (300)
63 KOG1552 Predicted alpha/beta h 99.8 2.4E-19 5.3E-24 138.1 17.6 187 80-373 60-250 (258)
64 COG0596 MhpC Predicted hydrola 99.8 1.2E-18 2.6E-23 144.9 21.4 114 68-187 8-124 (282)
65 PRK07868 acyl-CoA synthetase; 99.8 2E-19 4.4E-24 173.5 18.4 273 79-375 66-361 (994)
66 PF00326 Peptidase_S9: Prolyl 99.8 1.3E-19 2.8E-24 144.6 13.6 197 96-375 3-209 (213)
67 PF06342 DUF1057: Alpha/beta h 99.8 2.8E-18 6.1E-23 134.0 19.9 112 81-196 36-147 (297)
68 COG1506 DAP2 Dipeptidyl aminop 99.8 2.8E-19 6E-24 163.4 15.6 230 63-375 369-616 (620)
69 COG3208 GrsT Predicted thioest 99.8 5.6E-19 1.2E-23 135.2 12.7 225 79-373 6-234 (244)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 1.4E-18 3E-23 140.4 15.6 106 80-187 25-135 (266)
71 KOG4667 Predicted esterase [Li 99.8 1.9E-18 4E-23 128.1 14.8 210 76-358 29-242 (269)
72 KOG2931 Differentiation-relate 99.8 2.1E-17 4.5E-22 128.8 20.4 266 62-373 24-304 (326)
73 PLN00021 chlorophyllase 99.8 6.3E-18 1.4E-22 140.4 17.5 108 78-187 50-167 (313)
74 PLN02442 S-formylglutathione h 99.8 2.8E-17 6.1E-22 136.1 20.9 109 80-188 47-180 (283)
75 COG2021 MET2 Homoserine acetyl 99.8 8.5E-19 1.8E-23 142.3 11.5 283 66-374 32-367 (368)
76 PF03096 Ndr: Ndr family; Int 99.8 1.7E-18 3.6E-23 137.3 12.3 263 64-374 3-278 (283)
77 TIGR02821 fghA_ester_D S-formy 99.8 6.5E-17 1.4E-21 133.8 21.9 110 79-188 41-175 (275)
78 COG0429 Predicted hydrolase of 99.8 1.3E-17 2.8E-22 133.1 15.8 245 80-374 75-339 (345)
79 KOG2565 Predicted hydrolases o 99.8 3.4E-18 7.4E-23 137.1 12.5 292 61-374 125-462 (469)
80 KOG1838 Alpha/beta hydrolase [ 99.8 1.8E-17 4E-22 137.3 16.8 251 79-374 124-387 (409)
81 PF01738 DLH: Dienelactone hyd 99.8 4.2E-17 9E-22 130.6 15.4 184 79-375 13-217 (218)
82 PRK10162 acetyl esterase; Prov 99.7 5.2E-16 1.1E-20 130.9 18.8 107 80-188 81-197 (318)
83 PF02230 Abhydrolase_2: Phosph 99.7 1.9E-16 4.1E-21 126.3 13.0 182 79-374 13-214 (216)
84 TIGR01840 esterase_phb esteras 99.7 8.8E-16 1.9E-20 122.1 16.4 110 78-187 11-131 (212)
85 COG2945 Predicted hydrolase of 99.7 1.7E-15 3.7E-20 110.8 14.7 170 80-373 28-205 (210)
86 PF05448 AXE1: Acetyl xylan es 99.7 3.4E-15 7.4E-20 124.3 17.7 230 62-375 59-320 (320)
87 TIGR01839 PHA_synth_II poly(R) 99.7 1.9E-15 4.1E-20 131.6 16.3 105 80-189 215-331 (560)
88 COG0412 Dienelactone hydrolase 99.7 1.2E-14 2.5E-19 116.1 19.1 181 80-374 27-232 (236)
89 TIGR03230 lipo_lipase lipoprot 99.7 2.4E-15 5.2E-20 128.7 14.0 107 79-187 40-155 (442)
90 COG0400 Predicted esterase [Ge 99.6 3.9E-15 8.4E-20 114.7 12.0 172 80-366 18-200 (207)
91 PF06500 DUF1100: Alpha/beta h 99.6 1.1E-14 2.5E-19 122.0 15.2 129 57-187 162-297 (411)
92 cd00707 Pancreat_lipase_like P 99.6 1.9E-15 4.2E-20 124.1 10.0 118 69-188 24-149 (275)
93 TIGR00976 /NonD putative hydro 99.6 3.5E-14 7.5E-19 129.0 16.5 118 67-187 4-133 (550)
94 PRK10115 protease 2; Provision 99.6 9.2E-14 2E-18 128.2 19.3 126 63-188 420-561 (686)
95 TIGR03502 lipase_Pla1_cef extr 99.6 2.5E-14 5.3E-19 130.2 15.0 115 58-172 416-576 (792)
96 PF06821 Ser_hydrolase: Serine 99.6 1.9E-14 4.1E-19 108.6 10.6 89 83-187 1-92 (171)
97 COG3458 Acetyl esterase (deace 99.6 1.1E-13 2.4E-18 106.9 14.7 125 62-188 59-212 (321)
98 TIGR01849 PHB_depoly_PhaZ poly 99.6 4.3E-13 9.3E-18 113.8 19.3 274 81-375 103-406 (406)
99 PF08538 DUF1749: Protein of u 99.6 8.4E-14 1.8E-18 111.9 13.9 117 71-192 22-154 (303)
100 COG4757 Predicted alpha/beta h 99.6 9.1E-14 2E-18 104.8 13.1 116 66-183 12-135 (281)
101 PF00975 Thioesterase: Thioest 99.6 1.7E-13 3.7E-18 110.9 15.6 102 81-187 1-105 (229)
102 PF12146 Hydrolase_4: Putative 99.6 2.5E-14 5.4E-19 92.5 8.5 75 69-144 1-79 (79)
103 KOG3043 Predicted hydrolase re 99.5 5.7E-14 1.2E-18 105.6 10.4 198 62-375 20-240 (242)
104 KOG2624 Triglyceride lipase-ch 99.5 2.7E-13 5.8E-18 114.7 15.3 302 62-374 51-397 (403)
105 PF12740 Chlorophyllase2: Chlo 99.5 4.6E-13 9.9E-18 105.7 14.4 108 78-187 15-132 (259)
106 COG3571 Predicted hydrolase of 99.5 1.5E-12 3.3E-17 92.2 14.9 111 76-188 9-126 (213)
107 PF05728 UPF0227: Uncharacteri 99.5 2.5E-12 5.4E-17 98.1 16.4 88 83-188 2-93 (187)
108 PF10230 DUF2305: Uncharacteri 99.5 2.7E-13 5.9E-18 110.7 11.4 109 80-188 2-124 (266)
109 PF07859 Abhydrolase_3: alpha/ 99.5 7E-13 1.5E-17 105.8 10.6 97 83-188 1-112 (211)
110 COG3243 PhaC Poly(3-hydroxyalk 99.4 7.7E-13 1.7E-17 109.4 10.5 253 80-360 107-375 (445)
111 PF02273 Acyl_transf_2: Acyl t 99.4 4.1E-12 8.9E-17 96.9 9.8 117 67-187 10-135 (294)
112 PTZ00472 serine carboxypeptida 99.4 1.9E-11 4E-16 107.6 15.2 127 62-189 49-219 (462)
113 PF08840 BAAT_C: BAAT / Acyl-C 99.4 9.4E-13 2E-17 103.9 6.4 53 136-189 6-59 (213)
114 PRK05371 x-prolyl-dipeptidyl a 99.4 7.9E-11 1.7E-15 109.7 18.9 87 98-187 270-374 (767)
115 KOG2100 Dipeptidyl aminopeptid 99.3 4E-11 8.7E-16 111.3 16.6 227 58-374 496-746 (755)
116 KOG1515 Arylacetamide deacetyl 99.3 1.2E-10 2.5E-15 96.8 17.6 109 80-193 90-214 (336)
117 COG0657 Aes Esterase/lipase [L 99.3 1.3E-10 2.7E-15 98.5 17.9 105 80-189 79-194 (312)
118 COG3545 Predicted esterase of 99.3 4.5E-11 9.9E-16 86.9 12.7 92 81-187 3-95 (181)
119 PF03403 PAF-AH_p_II: Platelet 99.3 1.1E-11 2.3E-16 106.1 10.9 110 78-188 98-264 (379)
120 PF07224 Chlorophyllase: Chlor 99.3 3.4E-11 7.4E-16 93.1 12.4 110 77-188 43-159 (307)
121 PRK10252 entF enterobactin syn 99.3 1.1E-10 2.4E-15 118.1 19.8 103 78-186 1066-1171(1296)
122 PF09752 DUF2048: Uncharacteri 99.3 3.8E-10 8.3E-15 92.5 18.6 240 80-373 92-347 (348)
123 PF06057 VirJ: Bacterial virul 99.3 5.7E-11 1.2E-15 88.6 12.5 100 82-188 4-109 (192)
124 PF10503 Esterase_phd: Esteras 99.3 2.5E-10 5.4E-15 89.3 16.7 109 79-187 15-133 (220)
125 KOG2551 Phospholipase/carboxyh 99.3 3.2E-10 6.9E-15 85.8 15.4 60 306-373 161-222 (230)
126 KOG2281 Dipeptidyl aminopeptid 99.3 1.5E-10 3.2E-15 100.3 15.3 211 80-375 642-867 (867)
127 PF05677 DUF818: Chlamydia CHL 99.3 1.1E-09 2.3E-14 88.8 18.9 108 60-172 112-236 (365)
128 PF02129 Peptidase_S15: X-Pro 99.3 7.2E-11 1.6E-15 97.8 11.9 107 80-189 20-139 (272)
129 COG3319 Thioesterase domains o 99.3 1.4E-09 3E-14 86.9 18.6 101 81-187 1-104 (257)
130 PF07819 PGAP1: PGAP1-like pro 99.3 1.3E-10 2.7E-15 92.4 12.2 105 79-188 3-125 (225)
131 PF06028 DUF915: Alpha/beta hy 99.2 5.8E-10 1.3E-14 89.4 15.8 110 80-189 11-146 (255)
132 COG4188 Predicted dienelactone 99.2 4.1E-11 8.9E-16 98.4 8.4 96 79-174 70-182 (365)
133 KOG3975 Uncharacterized conser 99.2 6.8E-10 1.5E-14 85.1 13.9 251 80-373 29-301 (301)
134 PF03959 FSH1: Serine hydrolas 99.2 6.5E-11 1.4E-15 93.7 8.3 106 79-187 3-146 (212)
135 PLN02733 phosphatidylcholine-s 99.2 1.9E-10 4.1E-15 99.7 11.5 120 62-188 70-203 (440)
136 KOG2112 Lysophospholipase [Lip 99.1 5.4E-10 1.2E-14 84.0 10.4 106 81-187 4-129 (206)
137 PRK04940 hypothetical protein; 99.1 5.4E-09 1.2E-13 78.1 15.5 91 83-188 2-94 (180)
138 smart00824 PKS_TE Thioesterase 99.1 6.9E-09 1.5E-13 82.8 17.4 96 85-186 2-102 (212)
139 KOG4627 Kynurenine formamidase 99.1 9.7E-10 2.1E-14 81.7 8.5 100 80-187 67-173 (270)
140 COG3509 LpqC Poly(3-hydroxybut 99.1 6.8E-09 1.5E-13 82.3 13.5 124 63-186 38-179 (312)
141 PF12048 DUF3530: Protein of u 99.0 2E-07 4.3E-12 77.9 22.6 126 62-187 64-230 (310)
142 PF03583 LIP: Secretory lipase 99.0 2.7E-09 5.8E-14 88.5 10.8 62 306-370 217-280 (290)
143 KOG3847 Phospholipase A2 (plat 99.0 2.6E-09 5.7E-14 84.8 9.2 108 80-188 118-277 (399)
144 PF01674 Lipase_2: Lipase (cla 99.0 1.1E-09 2.4E-14 85.6 5.8 90 81-172 2-96 (219)
145 COG4099 Predicted peptidase [G 99.0 8E-09 1.7E-13 81.5 10.5 118 67-187 169-305 (387)
146 PF12715 Abhydrolase_7: Abhydr 98.9 4.8E-09 1E-13 87.1 9.2 106 79-185 114-259 (390)
147 PF00151 Lipase: Lipase; Inte 98.9 2.2E-09 4.8E-14 90.1 6.1 107 80-188 71-189 (331)
148 PF11339 DUF3141: Protein of u 98.8 1.6E-07 3.5E-12 80.5 15.1 211 99-331 93-320 (581)
149 PF05990 DUF900: Alpha/beta hy 98.8 1.6E-07 3.4E-12 75.3 11.8 110 78-188 16-139 (233)
150 PLN03016 sinapoylglucose-malat 98.8 2.4E-06 5.3E-11 74.7 19.8 127 62-189 39-213 (433)
151 PRK10439 enterobactin/ferric e 98.7 1.6E-06 3.5E-11 75.5 18.3 105 80-186 209-323 (411)
152 PF00450 Peptidase_S10: Serine 98.7 5.7E-07 1.2E-11 79.8 15.6 126 62-188 13-183 (415)
153 KOG1282 Serine carboxypeptidas 98.7 6.1E-06 1.3E-10 71.6 21.0 127 63-190 47-217 (454)
154 PLN02209 serine carboxypeptida 98.7 2.7E-05 5.9E-10 68.3 24.0 125 63-188 42-214 (437)
155 COG4814 Uncharacterized protei 98.7 1.8E-06 3.9E-11 67.0 14.7 107 81-187 46-177 (288)
156 KOG3253 Predicted alpha/beta h 98.7 2.2E-07 4.7E-12 80.7 10.7 100 80-187 176-287 (784)
157 PF05057 DUF676: Putative seri 98.7 1.1E-07 2.4E-12 75.5 8.0 89 80-171 4-98 (217)
158 KOG4840 Predicted hydrolases o 98.6 1.4E-06 3E-11 66.1 12.4 105 80-189 36-147 (299)
159 KOG1553 Predicted alpha/beta h 98.6 1.7E-07 3.7E-12 75.7 7.7 103 81-187 244-346 (517)
160 COG2936 Predicted acyl esteras 98.6 2.4E-07 5.3E-12 81.4 9.2 125 62-187 22-160 (563)
161 PF05577 Peptidase_S28: Serine 98.6 8.4E-07 1.8E-11 78.9 12.2 109 80-189 29-151 (434)
162 PF05705 DUF829: Eukaryotic pr 98.6 9.5E-06 2.1E-10 66.0 16.8 64 306-372 176-240 (240)
163 COG1075 LipA Predicted acetylt 98.5 3.2E-07 7E-12 77.8 7.9 103 80-188 59-166 (336)
164 PF04301 DUF452: Protein of un 98.5 3.5E-06 7.7E-11 65.2 11.5 83 80-190 11-94 (213)
165 PF00756 Esterase: Putative es 98.5 6.2E-07 1.3E-11 73.7 7.9 109 80-188 24-152 (251)
166 PF02450 LCAT: Lecithin:choles 98.4 3E-06 6.5E-11 73.6 10.8 115 64-188 34-162 (389)
167 cd00312 Esterase_lipase Estera 98.3 1.8E-06 3.9E-11 78.3 8.0 107 80-188 95-215 (493)
168 KOG1551 Uncharacterized conser 98.3 5.7E-06 1.2E-10 64.6 9.1 56 311-374 309-365 (371)
169 PF10340 DUF2424: Protein of u 98.3 4.7E-05 1E-09 64.2 15.0 105 80-189 122-238 (374)
170 PF11144 DUF2920: Protein of u 98.3 1.1E-05 2.4E-10 68.1 10.9 38 151-188 184-221 (403)
171 KOG2237 Predicted serine prote 98.2 1.2E-05 2.6E-10 70.9 10.7 126 63-188 445-586 (712)
172 PF10142 PhoPQ_related: PhoPQ- 98.2 2.3E-05 5E-10 66.3 11.9 60 306-374 260-319 (367)
173 COG1770 PtrB Protease II [Amin 98.2 6E-05 1.3E-09 67.1 14.4 123 67-189 427-565 (682)
174 COG4782 Uncharacterized protei 98.2 1.1E-05 2.3E-10 66.6 8.9 107 80-187 116-235 (377)
175 PLN02606 palmitoyl-protein thi 98.2 2.2E-05 4.8E-10 63.8 10.5 103 80-187 26-133 (306)
176 KOG3724 Negative regulator of 98.2 1.4E-05 3E-10 72.2 9.9 102 80-186 89-220 (973)
177 KOG3101 Esterase D [General fu 98.2 1.2E-05 2.7E-10 60.6 7.9 110 80-189 44-179 (283)
178 KOG2183 Prolylcarboxypeptidase 98.1 5.2E-05 1.1E-09 63.5 11.9 119 69-187 64-203 (492)
179 KOG2541 Palmitoyl protein thio 98.1 3E-05 6.4E-10 61.0 10.0 100 81-187 24-129 (296)
180 COG2272 PnbA Carboxylesterase 98.1 6.9E-06 1.5E-10 70.6 7.0 122 65-187 75-218 (491)
181 COG3150 Predicted esterase [Ge 98.1 1.6E-05 3.5E-10 57.6 7.5 91 83-189 2-94 (191)
182 PLN02633 palmitoyl protein thi 98.1 6.5E-05 1.4E-09 61.2 10.6 102 81-187 26-132 (314)
183 COG1505 Serine proteases of th 98.0 4.4E-05 9.5E-10 67.1 10.2 126 62-187 397-536 (648)
184 PLN02213 sinapoylglucose-malat 97.9 0.0021 4.6E-08 54.5 18.0 65 308-374 233-316 (319)
185 PF00135 COesterase: Carboxyle 97.9 2.2E-05 4.8E-10 72.3 6.5 120 68-187 107-246 (535)
186 PF02089 Palm_thioest: Palmito 97.9 2.1E-05 4.6E-10 63.4 5.4 106 81-187 6-117 (279)
187 PF08386 Abhydrolase_4: TAP-li 97.9 1.6E-05 3.5E-10 54.7 4.2 60 308-374 34-93 (103)
188 COG1073 Hydrolases of the alph 97.9 0.00011 2.5E-09 61.8 10.3 65 306-375 229-297 (299)
189 COG0627 Predicted esterase [Ge 97.9 6.1E-05 1.3E-09 62.8 8.0 112 80-191 54-192 (316)
190 COG3946 VirJ Type IV secretory 97.8 0.00092 2E-08 56.2 13.3 86 82-174 262-349 (456)
191 PF07082 DUF1350: Protein of u 97.8 0.0018 3.9E-08 51.2 14.0 94 80-184 17-123 (250)
192 KOG2182 Hydrolytic enzymes of 97.7 0.0007 1.5E-08 58.5 11.7 111 79-189 85-210 (514)
193 COG2382 Fes Enterochelin ester 97.7 0.00019 4.2E-09 58.0 7.3 106 80-188 98-214 (299)
194 PLN02517 phosphatidylcholine-s 97.5 0.00022 4.8E-09 63.3 6.4 91 95-187 157-264 (642)
195 KOG3967 Uncharacterized conser 97.4 0.0023 5E-08 48.8 9.6 104 80-186 101-227 (297)
196 KOG2369 Lecithin:cholesterol a 97.4 0.00019 4.1E-09 61.6 4.2 86 95-187 125-226 (473)
197 cd00741 Lipase Lipase. Lipase 97.4 0.00053 1.1E-08 51.4 6.0 56 132-187 7-68 (153)
198 COG2819 Predicted hydrolase of 97.2 0.00088 1.9E-08 53.5 5.4 51 137-187 122-173 (264)
199 PF01764 Lipase_3: Lipase (cla 97.1 0.0016 3.4E-08 48.0 5.8 37 134-172 49-85 (140)
200 PF06259 Abhydrolase_8: Alpha/ 97.0 0.023 4.9E-07 43.2 11.3 56 132-187 87-145 (177)
201 COG2939 Carboxypeptidase C (ca 96.9 0.0063 1.4E-07 53.1 8.8 110 80-190 101-240 (498)
202 COG4553 DepA Poly-beta-hydroxy 96.9 0.16 3.4E-06 41.3 15.7 104 80-189 103-212 (415)
203 PF06441 EHN: Epoxide hydrolas 96.8 0.003 6.5E-08 43.8 5.1 42 59-100 67-112 (112)
204 PF11187 DUF2974: Protein of u 96.8 0.0047 1E-07 49.1 6.4 37 152-188 85-125 (224)
205 PF05576 Peptidase_S37: PS-10 96.7 0.0045 9.7E-08 52.6 6.2 107 79-187 62-170 (448)
206 KOG2521 Uncharacterized conser 96.7 0.13 2.8E-06 43.6 14.4 64 308-374 225-289 (350)
207 COG2830 Uncharacterized protei 96.7 0.024 5.2E-07 41.2 8.6 83 81-190 12-94 (214)
208 KOG1516 Carboxylesterase and r 96.6 0.0072 1.6E-07 55.9 7.3 118 67-187 94-233 (545)
209 cd00519 Lipase_3 Lipase (class 96.2 0.0096 2.1E-07 48.0 5.1 41 132-172 107-149 (229)
210 COG4287 PqaA PhoPQ-activated p 96.2 0.052 1.1E-06 45.4 9.0 59 306-373 327-385 (507)
211 PF01083 Cutinase: Cutinase; 96.0 0.033 7.1E-07 42.8 7.0 76 108-187 40-123 (179)
212 PLN00413 triacylglycerol lipas 96.0 0.025 5.5E-07 49.5 6.8 51 134-186 269-327 (479)
213 PLN02162 triacylglycerol lipas 95.9 0.026 5.6E-07 49.2 6.6 34 135-170 264-297 (475)
214 PLN02571 triacylglycerol lipas 95.8 0.018 3.8E-07 49.8 5.0 39 133-171 208-246 (413)
215 COG4947 Uncharacterized protei 95.8 0.029 6.2E-07 41.4 5.2 114 69-188 14-138 (227)
216 PLN02408 phospholipase A1 95.6 0.024 5.3E-07 48.2 5.0 38 135-172 184-221 (365)
217 PF11288 DUF3089: Protein of u 95.5 0.037 8.1E-07 43.0 5.4 69 102-172 41-116 (207)
218 TIGR03712 acc_sec_asp2 accesso 95.4 0.56 1.2E-05 41.3 12.7 107 73-186 280-390 (511)
219 PLN02454 triacylglycerol lipas 95.2 0.039 8.3E-07 47.7 5.3 20 152-171 229-248 (414)
220 PF05277 DUF726: Protein of un 95.1 0.081 1.7E-06 44.9 6.7 39 150-188 219-262 (345)
221 PLN02324 triacylglycerol lipas 95.1 0.042 9.1E-07 47.5 4.9 37 135-171 199-235 (415)
222 KOG4372 Predicted alpha/beta h 95.1 0.039 8.5E-07 47.0 4.7 88 80-171 80-170 (405)
223 PLN02310 triacylglycerol lipas 95.1 0.087 1.9E-06 45.5 6.8 39 133-171 189-229 (405)
224 PF07519 Tannase: Tannase and 95.0 0.28 6E-06 44.2 10.3 66 307-374 352-426 (474)
225 PF06850 PHB_depo_C: PHB de-po 94.9 0.031 6.7E-07 42.5 3.3 65 308-375 134-202 (202)
226 PLN02802 triacylglycerol lipas 94.8 0.052 1.1E-06 48.0 4.9 39 134-172 313-351 (509)
227 PLN02934 triacylglycerol lipas 94.4 0.074 1.6E-06 47.1 4.8 35 134-170 306-340 (515)
228 PLN03037 lipase class 3 family 94.3 0.086 1.9E-06 46.8 5.0 39 133-171 298-338 (525)
229 PF04083 Abhydro_lipase: Parti 94.1 0.091 2E-06 32.1 3.6 35 62-96 15-59 (63)
230 PLN02761 lipase class 3 family 94.0 0.1 2.2E-06 46.4 5.0 38 134-171 273-314 (527)
231 PF08237 PE-PPE: PE-PPE domain 94.0 0.36 7.8E-06 38.6 7.7 82 107-188 2-91 (225)
232 PLN02753 triacylglycerol lipas 93.8 0.12 2.6E-06 46.0 5.0 38 134-171 292-332 (531)
233 KOG1202 Animal-type fatty acid 93.7 0.36 7.7E-06 47.3 8.1 98 78-187 2121-2220(2376)
234 PLN02719 triacylglycerol lipas 93.3 0.16 3.4E-06 45.1 4.9 38 134-171 278-318 (518)
235 KOG4569 Predicted lipase [Lipi 92.1 0.27 5.8E-06 42.2 4.7 37 133-171 155-191 (336)
236 PF07519 Tannase: Tannase and 91.9 0.34 7.3E-06 43.7 5.3 82 105-187 57-151 (474)
237 PLN02847 triacylglycerol lipas 91.4 0.37 7.9E-06 43.7 4.9 20 152-171 252-271 (633)
238 TIGR01626 ytfJ_HI0045 conserve 90.5 1.1 2.4E-05 34.5 6.2 106 64-186 39-157 (184)
239 KOG2029 Uncharacterized conser 90.2 0.61 1.3E-05 42.1 5.1 57 130-186 504-572 (697)
240 KOG1283 Serine carboxypeptidas 90.0 0.98 2.1E-05 37.5 5.8 108 80-189 31-169 (414)
241 PF06792 UPF0261: Uncharacteri 88.9 9.4 0.0002 33.4 11.0 103 81-183 2-127 (403)
242 COG5153 CVT17 Putative lipase 87.6 1.5 3.3E-05 35.7 5.2 32 151-184 276-307 (425)
243 KOG4540 Putative lipase essent 87.6 1.5 3.3E-05 35.7 5.2 32 151-184 276-307 (425)
244 KOG4388 Hormone-sensitive lipa 87.5 1.1 2.3E-05 40.5 4.7 100 82-186 398-508 (880)
245 PF03283 PAE: Pectinacetyleste 86.9 3 6.5E-05 36.2 7.1 41 150-190 155-199 (361)
246 PRK02399 hypothetical protein; 86.6 22 0.00047 31.2 12.4 104 81-184 4-130 (406)
247 PF09949 DUF2183: Uncharacteri 84.9 10 0.00022 25.9 8.2 84 95-181 12-97 (100)
248 PF09994 DUF2235: Uncharacteri 83.8 9.4 0.0002 31.8 8.5 91 81-172 2-113 (277)
249 KOG2872 Uroporphyrinogen decar 78.7 10 0.00023 31.1 6.6 72 80-159 252-336 (359)
250 KOG2385 Uncharacterized conser 78.7 6.8 0.00015 35.1 6.0 40 150-189 446-490 (633)
251 cd01714 ETF_beta The electron 76.9 15 0.00033 28.9 7.2 72 99-182 68-145 (202)
252 COG3340 PepE Peptidase E [Amin 76.8 12 0.00027 29.3 6.3 39 78-116 30-71 (224)
253 COG3673 Uncharacterized conser 76.3 32 0.00069 29.1 8.8 92 80-171 31-142 (423)
254 PF06309 Torsin: Torsin; Inte 75.8 19 0.00042 25.7 6.6 29 79-107 51-81 (127)
255 KOG4389 Acetylcholinesterase/B 74.6 5.4 0.00012 35.5 4.4 106 81-188 136-257 (601)
256 PRK12467 peptide synthase; Pro 74.1 15 0.00034 43.2 8.9 97 81-183 3693-3792(3956)
257 PF05576 Peptidase_S37: PS-10 73.6 8 0.00017 33.8 5.1 58 306-372 349-411 (448)
258 COG3056 Uncharacterized lipopr 72.9 28 0.00061 26.5 7.0 73 80-162 77-151 (204)
259 COG2939 Carboxypeptidase C (ca 72.2 9 0.0002 34.4 5.2 65 308-373 425-489 (498)
260 PRK05579 bifunctional phosphop 70.2 68 0.0015 28.5 10.2 78 80-158 116-196 (399)
261 COG0529 CysC Adenylylsulfate k 69.2 16 0.00034 28.0 5.1 62 77-142 19-84 (197)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 67.7 8.7 0.00019 32.6 4.1 33 138-172 32-64 (306)
263 cd07198 Patatin Patatin-like p 66.6 11 0.00023 28.8 4.1 33 139-173 16-48 (172)
264 PF11713 Peptidase_C80: Peptid 66.1 4.1 8.9E-05 30.5 1.7 49 115-163 61-116 (157)
265 PRK13728 conjugal transfer pro 65.8 21 0.00046 27.4 5.5 53 64-119 58-111 (181)
266 PF00698 Acyl_transf_1: Acyl t 65.6 5.3 0.00011 34.1 2.5 32 138-171 73-104 (318)
267 smart00827 PKS_AT Acyl transfe 65.5 8.2 0.00018 32.5 3.7 31 139-171 72-102 (298)
268 PRK10279 hypothetical protein; 65.2 9.5 0.00021 32.2 3.9 33 139-173 23-55 (300)
269 cd07210 Pat_hypo_W_succinogene 64.6 13 0.00028 29.8 4.3 31 141-173 20-50 (221)
270 cd07207 Pat_ExoU_VipD_like Exo 64.2 12 0.00025 29.2 4.1 32 139-172 17-48 (194)
271 TIGR03131 malonate_mdcH malona 63.8 9.5 0.00021 32.2 3.7 31 139-171 66-96 (295)
272 cd07227 Pat_Fungal_NTE1 Fungal 63.7 12 0.00026 31.0 4.1 33 138-172 27-59 (269)
273 PF08484 Methyltransf_14: C-me 63.0 24 0.00051 26.6 5.2 53 132-184 50-102 (160)
274 TIGR02764 spore_ybaN_pdaB poly 61.4 9 0.00019 29.8 2.9 34 81-114 152-188 (191)
275 TIGR02873 spore_ylxY probable 60.9 13 0.00028 30.8 3.9 34 81-114 231-264 (268)
276 PRK14582 pgaB outer membrane N 60.3 17 0.00037 34.5 4.9 77 80-157 48-141 (671)
277 PRK05282 (alpha)-aspartyl dipe 59.1 57 0.0012 26.4 7.0 38 79-116 30-70 (233)
278 COG1752 RssA Predicted esteras 59.0 14 0.00031 31.3 4.0 33 139-173 29-61 (306)
279 TIGR00128 fabD malonyl CoA-acy 58.8 12 0.00026 31.4 3.5 31 140-172 73-104 (290)
280 COG1448 TyrB Aspartate/tyrosin 58.6 60 0.0013 28.3 7.3 86 80-184 171-263 (396)
281 TIGR02884 spore_pdaA delta-lac 58.5 15 0.00033 29.5 3.8 34 81-114 187-221 (224)
282 PF03610 EIIA-man: PTS system 58.4 61 0.0013 22.7 7.2 76 82-171 2-78 (116)
283 COG3065 Slp Starvation-inducib 57.5 46 0.00099 25.3 5.7 27 3-29 2-28 (191)
284 cd07228 Pat_NTE_like_bacteria 57.2 18 0.00039 27.7 3.9 31 141-173 20-50 (175)
285 PRK03147 thiol-disulfide oxido 55.4 84 0.0018 23.7 7.4 52 64-115 46-102 (173)
286 cd07209 Pat_hypo_Ecoli_Z1214_l 54.8 20 0.00044 28.5 4.0 33 139-173 16-48 (215)
287 cd05312 NAD_bind_1_malic_enz N 54.4 40 0.00087 28.1 5.6 82 83-170 27-125 (279)
288 cd07205 Pat_PNPLA6_PNPLA7_NTE1 53.0 27 0.00059 26.6 4.3 30 141-172 20-49 (175)
289 cd07224 Pat_like Patatin-like 52.0 28 0.0006 28.2 4.4 35 139-173 17-51 (233)
290 cd07230 Pat_TGL4-5_like Triacy 51.4 15 0.00033 32.8 2.9 36 141-178 93-128 (421)
291 PF04244 DPRP: Deoxyribodipyri 51.4 57 0.0012 26.2 5.9 49 95-156 50-98 (224)
292 PF05724 TPMT: Thiopurine S-me 51.2 20 0.00043 28.7 3.4 32 80-116 37-68 (218)
293 PF10081 Abhydrolase_9: Alpha/ 50.8 29 0.00063 28.8 4.2 53 136-188 93-149 (289)
294 COG3933 Transcriptional antite 50.7 1.2E+02 0.0026 27.2 7.9 75 80-169 109-183 (470)
295 PF13439 Glyco_transf_4: Glyco 50.7 80 0.0017 23.4 6.7 90 88-184 10-110 (177)
296 PRK13256 thiopurine S-methyltr 50.3 20 0.00043 28.8 3.2 30 82-116 45-74 (226)
297 PF14488 DUF4434: Domain of un 48.6 75 0.0016 24.1 5.9 59 91-149 17-80 (166)
298 COG1087 GalE UDP-glucose 4-epi 47.5 1.4E+02 0.0031 25.3 7.6 87 98-187 15-121 (329)
299 PRK13792 lysozyme inhibitor; P 47.1 92 0.002 22.4 5.7 7 107-113 104-110 (127)
300 PRK11613 folP dihydropteroate 47.0 1.7E+02 0.0038 24.5 8.2 58 97-165 166-225 (282)
301 PF12780 AAA_8: P-loop contain 46.8 1.5E+02 0.0033 24.7 7.9 62 82-156 33-94 (268)
302 TIGR00521 coaBC_dfp phosphopan 46.6 2.1E+02 0.0046 25.4 9.8 100 81-185 113-234 (390)
303 cd07229 Pat_TGL3_like Triacylg 46.3 23 0.00049 31.2 3.1 39 140-180 102-140 (391)
304 TIGR03127 RuMP_HxlB 6-phospho 46.2 63 0.0014 24.7 5.4 32 83-114 32-63 (179)
305 PF01583 APS_kinase: Adenylyls 45.5 49 0.0011 24.8 4.4 36 80-115 1-38 (156)
306 cd07232 Pat_PLPL Patain-like p 45.2 22 0.00047 31.7 3.0 35 143-179 89-123 (407)
307 COG0541 Ffh Signal recognition 44.9 1.2E+02 0.0026 27.1 7.2 71 101-183 176-248 (451)
308 cd07231 Pat_SDP1-like Sugar-De 44.6 23 0.0005 30.0 2.8 35 141-177 88-122 (323)
309 TIGR02816 pfaB_fam PfaB family 44.5 28 0.0006 32.2 3.6 31 140-172 255-286 (538)
310 TIGR03249 KdgD 5-dehydro-4-deo 44.4 2E+02 0.0042 24.4 12.2 88 91-187 23-111 (296)
311 PRK14581 hmsF outer membrane N 44.2 67 0.0014 30.8 6.0 78 80-158 48-142 (672)
312 PHA02114 hypothetical protein 44.2 39 0.00084 22.6 3.2 34 81-114 83-116 (127)
313 COG1073 Hydrolases of the alph 44.1 0.81 1.8E-05 38.3 -5.9 38 78-115 47-84 (299)
314 PF12242 Eno-Rase_NADH_b: NAD( 43.9 44 0.00095 21.4 3.3 24 150-173 39-62 (78)
315 KOG1200 Mitochondrial/plastidi 42.9 1.5E+02 0.0034 23.3 6.6 22 95-116 26-47 (256)
316 PF00326 Peptidase_S9: Prolyl 42.8 65 0.0014 25.4 5.2 63 79-145 143-208 (213)
317 PRK14729 miaA tRNA delta(2)-is 42.5 1.8E+02 0.0039 24.8 7.7 76 82-159 5-101 (300)
318 COG2230 Cfa Cyclopropane fatty 42.5 74 0.0016 26.6 5.4 50 133-183 55-105 (283)
319 cd07208 Pat_hypo_Ecoli_yjju_li 42.4 42 0.00092 27.8 4.2 21 154-174 30-50 (266)
320 PRK14457 ribosomal RNA large s 42.0 2.2E+02 0.0048 24.8 8.4 78 82-168 259-336 (345)
321 PF05643 DUF799: Putative bact 42.0 1.1E+02 0.0023 24.4 5.8 33 82-114 37-75 (215)
322 PF10605 3HBOH: 3HB-oligomer h 41.8 31 0.00068 32.0 3.4 48 306-356 552-604 (690)
323 cd07212 Pat_PNPLA9 Patatin-lik 41.6 24 0.00052 30.1 2.6 19 154-172 35-53 (312)
324 COG0482 TrmU Predicted tRNA(5- 41.5 76 0.0016 27.5 5.4 60 81-148 5-64 (356)
325 PRK09936 hypothetical protein; 41.0 1.1E+02 0.0025 25.6 6.1 52 92-149 36-87 (296)
326 cd03146 GAT1_Peptidase_E Type 40.8 1.8E+02 0.004 23.0 8.7 86 78-167 29-129 (212)
327 cd03818 GT1_ExpC_like This fam 40.3 67 0.0015 28.4 5.4 38 83-122 2-39 (396)
328 cd07206 Pat_TGL3-4-5_SDP1 Tria 40.1 39 0.00085 28.5 3.5 29 146-176 94-122 (298)
329 TIGR03709 PPK2_rel_1 polyphosp 39.7 49 0.0011 27.4 4.0 39 78-116 53-93 (264)
330 COG3727 Vsr DNA G:T-mismatch r 39.7 82 0.0018 22.6 4.4 15 99-113 100-114 (150)
331 COG1576 Uncharacterized conser 39.1 78 0.0017 23.6 4.5 49 107-168 67-115 (155)
332 COG4822 CbiK Cobalamin biosynt 38.9 2E+02 0.0043 22.9 7.1 36 81-116 139-176 (265)
333 KOG2805 tRNA (5-methylaminomet 38.8 1.1E+02 0.0023 26.0 5.6 63 81-149 7-69 (377)
334 PRK00726 murG undecaprenyldiph 38.7 2.1E+02 0.0045 24.8 8.1 35 83-117 5-39 (357)
335 KOG2316 Predicted ATPase (PP-l 38.7 59 0.0013 25.8 4.0 65 100-167 56-120 (277)
336 COG1506 DAP2 Dipeptidyl aminop 37.9 87 0.0019 29.9 5.9 42 80-121 551-595 (620)
337 COG0218 Predicted GTPase [Gene 37.7 58 0.0013 25.5 3.8 20 72-91 63-82 (200)
338 cd05005 SIS_PHI Hexulose-6-pho 37.1 1.1E+02 0.0025 23.3 5.6 31 84-114 36-66 (179)
339 PLN02748 tRNA dimethylallyltra 36.4 2.2E+02 0.0048 26.0 7.8 77 80-159 21-120 (468)
340 TIGR03707 PPK2_P_aer polyphosp 36.4 53 0.0012 26.5 3.6 70 80-164 30-102 (230)
341 PRK11627 hypothetical protein; 36.2 2.1E+02 0.0046 22.4 8.1 12 99-110 84-95 (192)
342 PRK14194 bifunctional 5,10-met 35.3 75 0.0016 26.9 4.4 36 136-171 143-182 (301)
343 PF00448 SRP54: SRP54-type pro 35.1 2.2E+02 0.0048 22.3 7.6 76 96-183 72-149 (196)
344 KOG4231 Intracellular membrane 35.0 49 0.0011 29.9 3.4 53 105-172 414-471 (763)
345 cd07204 Pat_PNPLA_like Patatin 34.9 70 0.0015 26.1 4.2 20 154-173 34-53 (243)
346 PF09314 DUF1972: Domain of un 34.6 2.2E+02 0.0048 22.1 9.9 89 82-170 5-113 (185)
347 TIGR03586 PseI pseudaminic aci 33.5 3.2E+02 0.0069 23.7 8.5 81 80-172 134-215 (327)
348 PRK13255 thiopurine S-methyltr 33.5 63 0.0014 25.8 3.7 17 100-116 52-68 (218)
349 PF03853 YjeF_N: YjeF-related 33.0 73 0.0016 24.2 3.8 36 78-113 23-58 (169)
350 PF02590 SPOUT_MTase: Predicte 32.8 84 0.0018 23.5 4.0 62 107-186 67-128 (155)
351 PRK14974 cell division protein 32.1 3.4E+02 0.0074 23.6 8.3 71 101-183 216-288 (336)
352 PF03976 PPK2: Polyphosphate k 31.9 25 0.00054 28.3 1.2 37 80-116 30-68 (228)
353 KOG0781 Signal recognition par 31.7 1.9E+02 0.0041 26.4 6.3 72 100-183 459-539 (587)
354 TIGR00752 slp outer membrane l 31.5 95 0.0021 24.0 4.1 21 61-81 47-67 (182)
355 cd07218 Pat_iPLA2 Calcium-inde 31.5 93 0.002 25.5 4.4 20 154-173 33-52 (245)
356 cd00951 KDGDH 5-dehydro-4-deox 31.5 3.2E+02 0.0069 23.0 12.2 87 92-187 19-106 (289)
357 COG0279 GmhA Phosphoheptose is 31.0 56 0.0012 24.7 2.7 72 85-162 45-120 (176)
358 PF02230 Abhydrolase_2: Phosph 31.0 1.5E+02 0.0032 23.5 5.5 57 80-145 155-214 (216)
359 PRK10449 heat-inducible protei 30.7 2.1E+02 0.0045 21.0 5.7 12 62-73 35-46 (140)
360 PRK03620 5-dehydro-4-deoxygluc 30.7 3.4E+02 0.0073 23.1 11.9 86 92-186 26-112 (303)
361 cd01819 Patatin_and_cPLA2 Pata 30.6 94 0.002 23.2 4.0 29 141-169 18-46 (155)
362 TIGR03607 patatin-related prot 30.4 1.6E+02 0.0035 28.7 6.2 19 152-170 67-85 (739)
363 TIGR03840 TMPT_Se_Te thiopurin 29.4 74 0.0016 25.3 3.5 17 100-116 49-65 (213)
364 PRK06171 sorbitol-6-phosphate 29.4 2E+02 0.0042 23.6 6.2 32 84-117 12-43 (266)
365 COG3946 VirJ Type IV secretory 29.3 2.4E+02 0.0052 25.1 6.4 103 82-184 50-155 (456)
366 TIGR02883 spore_cwlD N-acetylm 29.1 1.4E+02 0.0031 23.2 4.9 14 110-124 2-15 (189)
367 PF01580 FtsK_SpoIIIE: FtsK/Sp 28.6 2E+02 0.0044 22.4 5.9 44 79-122 37-85 (205)
368 PRK00091 miaA tRNA delta(2)-is 28.6 2.6E+02 0.0057 23.9 6.7 74 81-156 4-99 (307)
369 PRK00103 rRNA large subunit me 28.5 1.5E+02 0.0033 22.2 4.7 47 107-165 67-113 (157)
370 PLN03059 beta-galactosidase; P 28.2 6.2E+02 0.013 25.3 10.7 78 87-168 52-136 (840)
371 cd06292 PBP1_LacI_like_10 Liga 28.1 3.3E+02 0.0072 22.2 7.8 74 82-159 58-131 (273)
372 PF06289 FlbD: Flagellar prote 28.1 1E+02 0.0022 18.7 3.0 35 338-374 23-57 (60)
373 PF03054 tRNA_Me_trans: tRNA m 28.0 62 0.0013 28.2 3.0 48 100-149 17-64 (356)
374 PRK13398 3-deoxy-7-phosphohept 27.9 3.6E+02 0.0077 22.5 9.9 40 79-118 133-172 (266)
375 TIGR01425 SRP54_euk signal rec 27.9 4.6E+02 0.01 23.8 8.9 71 100-182 175-247 (429)
376 COG2185 Sbm Methylmalonyl-CoA 27.9 2.5E+02 0.0055 20.7 7.5 37 78-114 10-47 (143)
377 PLN02752 [acyl-carrier protein 27.7 80 0.0017 27.4 3.7 19 153-171 126-144 (343)
378 PRK14456 ribosomal RNA large s 27.7 4.3E+02 0.0093 23.3 8.0 77 83-168 283-359 (368)
379 PF05577 Peptidase_S28: Serine 27.5 97 0.0021 27.9 4.3 41 308-358 376-416 (434)
380 COG1856 Uncharacterized homolo 27.4 2.6E+02 0.0056 22.6 5.8 83 99-184 102-188 (275)
381 PF11191 DUF2782: Protein of u 27.4 2.1E+02 0.0046 19.7 6.8 24 65-88 44-68 (105)
382 PF03205 MobB: Molybdopterin g 27.2 1.2E+02 0.0026 22.2 3.9 41 83-123 2-44 (140)
383 PF14253 AbiH: Bacteriophage a 27.0 31 0.00068 28.5 1.0 13 151-163 235-247 (270)
384 PF03033 Glyco_transf_28: Glyc 26.8 56 0.0012 23.5 2.2 34 83-116 2-35 (139)
385 COG0859 RfaF ADP-heptose:LPS h 26.8 1.4E+02 0.0031 25.7 5.0 34 80-113 175-214 (334)
386 PTZ00445 p36-lilke protein; Pr 26.7 3E+02 0.0066 22.0 6.1 68 94-161 29-102 (219)
387 TIGR01361 DAHP_synth_Bsub phos 26.7 3.7E+02 0.0081 22.3 9.7 93 79-183 131-230 (260)
388 COG0324 MiaA tRNA delta(2)-iso 26.5 4.1E+02 0.0089 22.7 8.0 78 81-160 3-102 (308)
389 COG2240 PdxK Pyridoxal/pyridox 26.1 4E+02 0.0086 22.4 10.1 96 86-190 11-117 (281)
390 PRK06490 glutamine amidotransf 26.1 3.6E+02 0.0079 22.0 9.2 34 134-169 70-103 (239)
391 KOG1209 1-Acyl dihydroxyaceton 25.9 1.6E+02 0.0034 23.6 4.4 38 78-116 4-41 (289)
392 cd07217 Pat17_PNPLA8_PNPLA9_li 25.9 66 0.0014 27.9 2.8 18 154-171 44-61 (344)
393 PF13207 AAA_17: AAA domain; P 25.8 78 0.0017 22.0 2.8 37 83-121 1-40 (121)
394 PLN02840 tRNA dimethylallyltra 25.7 4.1E+02 0.0089 24.0 7.5 32 128-159 88-119 (421)
395 TIGR00632 vsr DNA mismatch end 25.4 1.5E+02 0.0032 21.0 3.9 14 100-113 100-113 (117)
396 COG0505 CarA Carbamoylphosphat 25.3 2.3E+02 0.0049 24.7 5.6 65 97-169 191-267 (368)
397 cd07213 Pat17_PNPLA8_PNPLA9_li 25.1 68 0.0015 27.0 2.7 19 154-172 37-55 (288)
398 cd03811 GT1_WabH_like This fam 24.8 4.1E+02 0.009 22.2 11.6 37 82-118 2-40 (353)
399 PLN02166 dTDP-glucose 4,6-dehy 24.7 5.3E+02 0.012 23.4 8.4 23 97-119 134-156 (436)
400 cd04951 GT1_WbdM_like This fam 24.5 4.4E+02 0.0096 22.4 9.9 36 82-117 2-39 (360)
401 PF01656 CbiA: CobQ/CobB/MinD/ 24.4 1.3E+02 0.0029 23.0 4.1 32 84-115 2-35 (195)
402 COG0331 FabD (acyl-carrier-pro 24.1 94 0.002 26.5 3.3 19 152-170 86-104 (310)
403 PLN02206 UDP-glucuronate decar 24.1 5.1E+02 0.011 23.6 8.1 36 81-119 120-155 (442)
404 PLN03050 pyridoxine (pyridoxam 24.0 1.8E+02 0.0039 23.9 4.8 34 81-114 61-94 (246)
405 PF01075 Glyco_transf_9: Glyco 24.0 1.3E+02 0.0028 24.4 4.1 35 79-113 104-143 (247)
406 PRK10319 N-acetylmuramoyl-l-al 23.9 2.1E+02 0.0045 24.2 5.2 15 108-123 56-70 (287)
407 TIGR00246 tRNA_RlmH_YbeA rRNA 23.8 1.5E+02 0.0033 22.2 3.9 46 108-166 66-111 (153)
408 KOG2170 ATPase of the AAA+ sup 23.6 2.1E+02 0.0045 24.4 4.9 17 80-96 109-125 (344)
409 COG1255 Uncharacterized protei 23.6 91 0.002 21.9 2.5 22 95-116 24-45 (129)
410 cd07025 Peptidase_S66 LD-Carbo 23.4 4.4E+02 0.0096 22.1 7.2 83 84-171 3-110 (282)
411 TIGR02069 cyanophycinase cyano 23.4 4.2E+02 0.0092 21.8 8.1 38 79-116 27-66 (250)
412 cd08185 Fe-ADH1 Iron-containin 23.2 5.1E+02 0.011 22.9 7.9 64 81-157 26-91 (380)
413 PF02882 THF_DHG_CYH_C: Tetrah 23.2 1.9E+02 0.0042 21.8 4.5 37 135-171 19-59 (160)
414 PF07302 AroM: AroM protein; 23.2 1.9E+02 0.004 23.3 4.5 40 81-120 152-191 (221)
415 COG2069 CdhD CO dehydrogenase/ 23.1 4.6E+02 0.01 22.2 9.3 91 61-160 100-208 (403)
416 KOG1411 Aspartate aminotransfe 23.0 1.5E+02 0.0033 25.6 4.1 85 81-183 198-289 (427)
417 PRK05723 flavodoxin; Provision 23.0 1.3E+02 0.0028 22.4 3.5 63 82-149 51-118 (151)
418 PF01734 Patatin: Patatin-like 22.9 81 0.0018 24.1 2.7 21 152-172 28-48 (204)
419 KOG1202 Animal-type fatty acid 22.6 1.4E+02 0.0031 30.8 4.5 25 137-163 570-594 (2376)
420 cd00382 beta_CA Carbonic anhyd 22.5 1.2E+02 0.0026 21.5 3.1 31 134-166 44-74 (119)
421 cd05014 SIS_Kpsf KpsF-like pro 22.4 2.8E+02 0.0061 19.4 5.2 31 84-114 3-33 (128)
422 PRK04148 hypothetical protein; 22.1 1.6E+02 0.0034 21.5 3.6 21 151-171 18-38 (134)
423 COG3621 Patatin [General funct 22.0 2E+02 0.0042 24.8 4.5 40 134-173 22-64 (394)
424 COG4850 Uncharacterized conser 22.0 3.4E+02 0.0074 23.4 5.9 46 138-185 267-314 (373)
425 cd01126 TraG_VirD4 The TraG/Tr 21.9 2.7E+02 0.0058 24.6 5.9 30 93-122 35-64 (384)
426 PRK07313 phosphopantothenoylcy 21.9 3.8E+02 0.0083 20.7 6.0 61 80-144 113-179 (182)
427 cd07211 Pat_PNPLA8 Patatin-lik 21.8 76 0.0016 27.0 2.4 17 154-170 44-60 (308)
428 cd00842 MPP_ASMase acid sphing 21.7 2.2E+02 0.0048 24.0 5.2 28 131-158 194-221 (296)
429 PRK15180 Vi polysaccharide bio 21.7 3E+02 0.0065 25.2 5.8 77 81-159 97-197 (831)
430 COG3887 Predicted signaling pr 21.6 2.5E+02 0.0055 26.4 5.5 53 134-187 321-379 (655)
431 cd01983 Fer4_NifH The Fer4_Nif 21.6 1.9E+02 0.0042 18.5 4.1 19 96-114 16-34 (99)
432 PRK14188 bifunctional 5,10-met 21.6 2E+02 0.0044 24.4 4.7 36 136-171 142-181 (296)
433 COG3054 Predicted transcriptio 21.5 2.5E+02 0.0053 20.9 4.4 43 63-105 38-86 (184)
434 PF01118 Semialdhyde_dh: Semia 21.4 1.6E+02 0.0034 20.7 3.6 32 152-184 1-33 (121)
435 PRK14179 bifunctional 5,10-met 21.4 1.8E+02 0.0039 24.5 4.3 37 136-172 142-182 (284)
436 PF03681 UPF0150: Uncharacteri 21.2 1.7E+02 0.0037 16.4 3.1 33 106-145 12-44 (48)
437 KOG1283 Serine carboxypeptidas 21.2 1.2E+02 0.0027 25.8 3.3 63 308-371 325-410 (414)
438 PRK07053 glutamine amidotransf 20.9 4.6E+02 0.01 21.3 8.6 83 81-169 4-100 (234)
439 PF09825 BPL_N: Biotin-protein 20.9 5.1E+02 0.011 22.9 7.0 32 83-114 3-37 (367)
440 PLN03019 carbonic anhydrase 20.8 1.5E+02 0.0032 25.5 3.7 31 134-166 200-230 (330)
441 cd03379 beta_CA_cladeD Carboni 20.6 1.5E+02 0.0032 21.8 3.4 28 134-163 41-68 (142)
442 PRK06523 short chain dehydroge 20.5 3E+02 0.0065 22.3 5.7 32 83-116 11-42 (260)
443 PLN02251 pyrophosphate-depende 20.5 6.6E+02 0.014 23.8 8.0 91 82-173 193-292 (568)
444 PF13200 DUF4015: Putative gly 20.5 1.7E+02 0.0037 25.1 4.1 72 84-157 2-79 (316)
445 COG1582 FlgEa Uncharacterized 20.5 1.9E+02 0.0041 17.7 3.1 35 338-374 23-57 (67)
446 COG0159 TrpA Tryptophan syntha 20.4 4.8E+02 0.01 21.8 6.4 73 80-170 95-168 (265)
447 cd03016 PRX_1cys Peroxiredoxin 20.2 4.4E+02 0.0095 20.7 8.0 93 78-186 24-127 (203)
448 PRK06193 hypothetical protein; 20.0 1.7E+02 0.0038 23.2 3.8 31 130-160 135-165 (206)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=284.49 Aligned_cols=300 Identities=53% Similarity=0.991 Sum_probs=266.4
Q ss_pred ccccceeEEEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 57 EEDIQHKVVNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 57 ~~~~~~~~~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
...+++.+++.+|.+++|.+.|+ +|.|+++||++.++.+|+..+..|+.+||+|+++|+||+|.|+.++....|++..
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 34456889999999999999885 8999999999999999999999999999999999999999999999878999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecC
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQE 214 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (375)
++.|+..++++++.+ +++++||+||+++|+.+|..+|++|+++|+++.+.. .+.....+.....+...++...++.
T Consensus 99 l~~di~~lld~Lg~~--k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLK--KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred HHHHHHHHHHHhccc--eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccc
Confidence 999999999999988 999999999999999999999999999999998776 6667777888889999999999999
Q ss_pred CcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeecccc
Q 017221 215 PGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIEL 294 (375)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (375)
+...+..+.....+.+...++....+.....+.. +...+.|+..++++.+...+...++....++++.+..
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r 245 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQ---------PNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRR 245 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCC---------CCCccchhhHHHHHHHHhccccccccccchhhHHHhh
Confidence 9999999999999888888888877766555441 2223778999999999999999999999999999999
Q ss_pred chhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 295 NWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 295 ~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
.++ ..++.+.++++|+++++|++|.+.+..... +..++.+++..+.++++|+||+++.|+|+++++.|.+|+++
T Consensus 246 ~w~-a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~-----~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 246 NWE-AAPWALAKITIPVLFIWGDLDPVLPYPIFG-----ELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred Cch-hccccccccccceEEEEecCcccccchhHH-----HHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 998 777777799999999999999999887322 23666777765788899999999999999999999999987
Q ss_pred C
Q 017221 375 F 375 (375)
Q Consensus 375 ~ 375 (375)
+
T Consensus 320 ~ 320 (322)
T KOG4178|consen 320 F 320 (322)
T ss_pred h
Confidence 4
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.4e-37 Score=256.91 Aligned_cols=272 Identities=21% Similarity=0.278 Sum_probs=178.8
Q ss_pred ceeEEEECCeEEEeeecCC-CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC-----CccccHhH
Q 017221 61 QHKVVNVNGINMHVAEKGQ-GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE-----VPSYTCLH 134 (375)
Q Consensus 61 ~~~~~~~~g~~l~~~~~g~-~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~-----~~~~~~~~ 134 (375)
+..+++++|.+++|...|+ +|+|||+||+++++..|..+++.|+++ |+|+++|+||||.|+.+.. ...+++++
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH
Confidence 4668899999999999984 899999999999999999999999987 8999999999999986531 13589999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCc--hhh----hHHhhcCCceE
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMK--PLQ----VFKAVYGDDYY 208 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~--~~~----~~~~~~~~~~~ 208 (375)
+++|+.++++.++.+ +++++||||||.+++.+|.++|++|+++|++++.......... ... .+...+..
T Consensus 88 ~a~~l~~~l~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 162 (294)
T PLN02824 88 WGEQLNDFCSDVVGD--PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE--- 162 (294)
T ss_pred HHHHHHHHHHHhcCC--CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc---
Confidence 999999999999988 9999999999999999999999999999999986532211100 000 01110000
Q ss_pred EEeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccce-ee
Q 017221 209 ICRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGG-IN 287 (375)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 287 (375)
.......+........++.++...... ...+..+....+.......+.... ..
T Consensus 163 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (294)
T PLN02824 163 ------TAVGKAFFKSVATPETVKNILCQCYHD--------------------DSAVTDELVEAILRPGLEPGAVDVFLD 216 (294)
T ss_pred ------hhHHHHHHHhhcCHHHHHHHHHHhccC--------------------hhhccHHHHHHHHhccCCchHHHHHHH
Confidence 000000001011111111111110000 001112222211111000000000 00
Q ss_pred eeeccc-cchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHH
Q 017221 288 YYRNIE-LNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNK 366 (375)
Q Consensus 288 ~~~~~~-~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 366 (375)
...... .... ..+.++++|+++|+|++|..+|.+..+. +.+..+++ ++++++++||++++|+|+++++
T Consensus 217 ~~~~~~~~~~~----~~l~~i~~P~lvi~G~~D~~~~~~~~~~------~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~ 285 (294)
T PLN02824 217 FISYSGGPLPE----ELLPAVKCPVLIAWGEKDPWEPVELGRA------YANFDAVE-DFIVLPGVGHCPQDEAPELVNP 285 (294)
T ss_pred HhccccccchH----HHHhhcCCCeEEEEecCCCCCChHHHHH------HHhcCCcc-ceEEeCCCCCChhhhCHHHHHH
Confidence 000000 0000 0122889999999999999999876654 56667777 9999999999999999999999
Q ss_pred HHHHHHhhC
Q 017221 367 HIYNFFQKF 375 (375)
Q Consensus 367 ~i~~fl~~~ 375 (375)
.|.+|++++
T Consensus 286 ~i~~fl~~~ 294 (294)
T PLN02824 286 LIESFVARH 294 (294)
T ss_pred HHHHHHhcC
Confidence 999999875
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.5e-36 Score=250.93 Aligned_cols=274 Identities=26% Similarity=0.423 Sum_probs=179.5
Q ss_pred cceeEEEECCeEEEeeecCCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHH
Q 017221 60 IQHKVVNVNGINMHVAEKGQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~~~g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
.+..+++.+|.+++|...|++|+|||+||++++...|+.+++.|.++ ++|+++|+||||.|+.+. ..++.+++++|+
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~dl 83 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARYL 83 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 34667889999999999999999999999999999999999999998 699999999999998765 468999999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchH
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIE 219 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
.+++++++.+ +++++||||||.+|+.++.++|++|+++|++++...+...... .......+.. +..+....
T Consensus 84 ~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~ 154 (295)
T PRK03592 84 DAWFDALGLD--DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF-PPAVRELFQA------LRSPGEGE 154 (295)
T ss_pred HHHHHHhCCC--CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc-chhHHHHHHH------HhCccccc
Confidence 9999999998 9999999999999999999999999999999985433111000 0000000000 00000000
Q ss_pred HHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCcc-ceeeeeeccccc---
Q 017221 220 AEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFT-GGINYYRNIELN--- 295 (375)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--- 295 (375)
..+ .....++..++. ......+.++....+...+...... ....+++.....
T Consensus 155 ~~~--~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (295)
T PRK03592 155 EMV--LEENVFIERVLP----------------------GSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEP 210 (295)
T ss_pred ccc--cchhhHHhhccc----------------------CcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcc
Confidence 000 000000110000 0001112333333333222111100 000011100000
Q ss_pred ---hhh--cccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHH
Q 017221 296 ---WEL--LAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYN 370 (375)
Q Consensus 296 ---~~~--~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 370 (375)
... .....+.++++|+++|+|++|.++++....++ +.+..+++ ++++++++||+++.|+|+++++.|.+
T Consensus 211 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~-----~~~~~~~~-~~~~i~~~gH~~~~e~p~~v~~~i~~ 284 (295)
T PRK03592 211 ADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDW-----CRSWPNQL-EITVFGAGLHFAQEDSPEEIGAAIAA 284 (295)
T ss_pred hhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHH-----HHHhhhhc-ceeeccCcchhhhhcCHHHHHHHHHH
Confidence 000 00011237899999999999999966555443 34556787 99999999999999999999999999
Q ss_pred HHhhC
Q 017221 371 FFQKF 375 (375)
Q Consensus 371 fl~~~ 375 (375)
|+++.
T Consensus 285 fl~~~ 289 (295)
T PRK03592 285 WLRRL 289 (295)
T ss_pred HHHHh
Confidence 99863
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.2e-35 Score=250.33 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=173.5
Q ss_pred cceeEEEECC-----eEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccH
Q 017221 60 IQHKVVNVNG-----INMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTC 132 (375)
Q Consensus 60 ~~~~~~~~~g-----~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~ 132 (375)
+...++++++ .+++|...|+ +|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+.....+++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 3467888998 8999999885 79999999999999999999999988899999999999999987653346789
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEee
Q 017221 133 LHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRF 212 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (375)
+++++|+.+++++++.+ +++++||||||.+++.+|.++|++|+++|++++........ .......+.. .. .
T Consensus 99 ~~~a~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~---~~--~ 169 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLT--DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP--MPDAFWAWRA---FS--Q 169 (302)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc--chHHHhhhhc---cc--c
Confidence 99999999999999988 99999999999999999999999999999998753221100 0000100000 00 0
Q ss_pred cCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceee----e
Q 017221 213 QEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGIN----Y 288 (375)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 288 (375)
..+. ..+..+..... ...+..+....+...+.......... .
T Consensus 170 ~~~~------------~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T PRK00870 170 YSPV------------LPVGRLVNGGT----------------------VRDLSDAVRAAYDAPFPDESYKAGARAFPLL 215 (302)
T ss_pred cCch------------hhHHHHhhccc----------------------cccCCHHHHHHhhcccCChhhhcchhhhhhc
Confidence 0000 00000000000 00001111111100000000000000 0
Q ss_pred e------eccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCcee---EEEecCCCCCCCcc
Q 017221 289 Y------RNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEE---VIVMEGVGHFINEE 359 (375)
Q Consensus 289 ~------~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~e 359 (375)
. ......... ...+.++++|+++|+|++|.++|... .. +.+..+++ + +++++++||++++|
T Consensus 216 ~~~~~~~~~~~~~~~~--~~~l~~i~~P~lii~G~~D~~~~~~~-~~------~~~~~~~~-~~~~~~~i~~~gH~~~~e 285 (302)
T PRK00870 216 VPTSPDDPAVAANRAA--WAVLERWDKPFLTAFSDSDPITGGGD-AI------LQKRIPGA-AGQPHPTIKGAGHFLQED 285 (302)
T ss_pred CCCCCCCcchHHHHHH--HHhhhcCCCceEEEecCCCCcccCch-HH------HHhhcccc-cccceeeecCCCccchhh
Confidence 0 000000000 01122889999999999999998754 43 56677766 5 88999999999999
Q ss_pred ChhHHHHHHHHHHhhC
Q 017221 360 KPDEVNKHIYNFFQKF 375 (375)
Q Consensus 360 ~p~~~~~~i~~fl~~~ 375 (375)
+|+++++.|.+|++++
T Consensus 286 ~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 286 SGEELAEAVLEFIRAT 301 (302)
T ss_pred ChHHHHHHHHHHHhcC
Confidence 9999999999999875
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-35 Score=254.86 Aligned_cols=283 Identities=23% Similarity=0.311 Sum_probs=177.2
Q ss_pred eeEEEECCe-EEEeeecCCC------CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 62 HKVVNVNGI-NMHVAEKGQG------PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 62 ~~~~~~~g~-~l~~~~~g~~------~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
..++..+|. +++|...|++ |+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+.. ..+++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~ 140 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMET 140 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHH
Confidence 356677787 9999998876 9999999999999999999999987 59999999999999987643 3678999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh-CCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEe-e
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF-RPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICR-F 212 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 212 (375)
+++++.++++.++.+ +++++||||||.+++.++.. +|++|+++|+++++..................+..++... .
T Consensus 141 ~a~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 141 WAELILDFLEEVVQK--PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHHHhcCC--CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 999999999999988 99999999999999998874 7999999999998653221110000000000000000000 0
Q ss_pred cCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccce-eeeeec
Q 017221 213 QEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGG-INYYRN 291 (375)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 291 (375)
..+......+........++.++...... ...+.++....+............ ......
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGN--------------------KEAVDDELVEIIRGPADDEGALDAFVSIVTG 278 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccC--------------------cccCCHHHHHHHHhhccCCChHHHHHHHHhc
Confidence 00111111112211222232222211000 001122222222111111000000 000000
Q ss_pred cccchhhcccCcCCcccccEEEEecCCCcCCCCCCc-hhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHH
Q 017221 292 IELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGT-KDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYN 370 (375)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 370 (375)
. ...... ..+.++++|+|+++|++|.++|++.. .+++ +.+.+.++++ ++++++++||++++|+|+++++.|.+
T Consensus 279 ~-~~~~~~--~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~--~~l~~~ip~~-~l~~i~~aGH~~~~E~Pe~~~~~I~~ 352 (360)
T PLN02679 279 P-PGPNPI--KLIPRISLPILVLWGDQDPFTPLDGPVGKYF--SSLPSQLPNV-TLYVLEGVGHCPHDDRPDLVHEKLLP 352 (360)
T ss_pred C-CCCCHH--HHhhhcCCCEEEEEeCCCCCcCchhhHHHHH--HhhhccCCce-EEEEcCCCCCCccccCHHHHHHHHHH
Confidence 0 000000 01127899999999999999988642 1111 2256778998 99999999999999999999999999
Q ss_pred HHhh
Q 017221 371 FFQK 374 (375)
Q Consensus 371 fl~~ 374 (375)
||++
T Consensus 353 FL~~ 356 (360)
T PLN02679 353 WLAQ 356 (360)
T ss_pred HHHh
Confidence 9986
No 6
>PLN02578 hydrolase
Probab=100.00 E-value=2e-33 Score=240.85 Aligned_cols=121 Identities=26% Similarity=0.406 Sum_probs=110.9
Q ss_pred eeEEEECCeEEEeeecCCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHH
Q 017221 62 HKVVNVNGINMHVAEKGQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIA 141 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~ 141 (375)
..+.+.+|.+++|...|++|+|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+. ..++.+++++++.+
T Consensus 68 ~~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred ceEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 356678899999999999999999999999999999999999875 999999999999998765 56889999999999
Q ss_pred HHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 142 LLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 142 ~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+++.+..+ +++++|||+||.+++.+|.++|++|+++|++++...
T Consensus 145 ~i~~~~~~--~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~ 188 (354)
T PLN02578 145 FVKEVVKE--PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQ 188 (354)
T ss_pred HHHHhccC--CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcc
Confidence 99999887 999999999999999999999999999999987654
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.3e-34 Score=239.43 Aligned_cols=258 Identities=18% Similarity=0.199 Sum_probs=169.8
Q ss_pred eeEEEECCeEEEeeec--CCC-CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHH
Q 017221 62 HKVVNVNGINMHVAEK--GQG-PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGD 138 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~--g~~-~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d 138 (375)
.++++++|.+++|... +++ ++|||+||++++...|.++++.|.+. |+|+++|+||||.|+.+. ..++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLAKL 80 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHHHH
Confidence 4577889999999764 334 79999999999999999999999875 999999999999998654 46789999999
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcch
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEI 218 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
+.+++++++++ +++|+||||||.+++.+|.++|++|+++|+++++.......... ..........
T Consensus 81 ~~~~i~~l~~~--~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~------------ 145 (276)
T TIGR02240 81 AARMLDYLDYG--QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP-KVLMMMASPR------------ 145 (276)
T ss_pred HHHHHHHhCcC--ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch-hHHHHhcCch------------
Confidence 99999999988 99999999999999999999999999999999876532111100 0000000000
Q ss_pred HHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCc-cceeeeeeccccchh
Q 017221 219 EAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGF-TGGINYYRNIELNWE 297 (375)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 297 (375)
..............++...... ..+....+......... ..............
T Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 199 (276)
T TIGR02240 146 -RYIQPSHGIHIAPDIYGGAFRR------------------------DPELAMAHASKVRSGGKLGYYWQLFAGLGWTS- 199 (276)
T ss_pred -hhhccccccchhhhhccceeec------------------------cchhhhhhhhhcccCCCchHHHHHHHHcCCch-
Confidence 0000000000000000000000 00000000000000000 00000000000000
Q ss_pred hcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 298 LLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 298 ~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
...+.++++|+++++|++|.++|++...+ +.+..+++ +++++++ ||+++.|+|+++++.|.+|+++
T Consensus 200 ---~~~l~~i~~P~lii~G~~D~~v~~~~~~~------l~~~~~~~-~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 200 ---IHWLHKIQQPTLVLAGDDDPIIPLINMRL------LAWRIPNA-ELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred ---hhHhhcCCCCEEEEEeCCCCcCCHHHHHH------HHHhCCCC-EEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 01122889999999999999999887665 66778888 9999986 9999999999999999999986
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=6.9e-33 Score=232.01 Aligned_cols=250 Identities=20% Similarity=0.241 Sum_probs=161.4
Q ss_pred CeEEEeeecCCCCEEEEEcCCCCChhhHHHH---HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 69 GINMHVAEKGQGPLILFIHGFPLLWYSWRHQ---ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 69 g~~l~~~~~g~~~~il~~hG~~~~~~~~~~~---~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
|.+++|...|++|+|||+||++++...|..+ +..+.+.||+|+++|+||||.|+........+ ...++|+.++++.
T Consensus 19 ~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-chhHHHHHHHHHH
Confidence 5779999999999999999999888777643 45666778999999999999998653211222 2568899999999
Q ss_pred hcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCC-CchhhhHHhhcCCceEEEeecCCcchHHHHHh
Q 017221 146 VAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPN-MKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQ 224 (375)
Q Consensus 146 l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
++.+ +++++||||||.+++.++.++|++|+++|++++........ ..........+ ..+ .
T Consensus 98 l~~~--~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~ 158 (282)
T TIGR03343 98 LDIE--KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLF----------------KLY-A 158 (282)
T ss_pred cCCC--CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHH----------------HHh-c
Confidence 9998 99999999999999999999999999999999764311100 00000000000 000 0
Q ss_pred cCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHH----------HHhhhcCccceeeeeecccc
Q 017221 225 MGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYA----------SKYEKAGFTGGINYYRNIEL 294 (375)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 294 (375)
.........++...... ......+...... ..+...... ..+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 215 (282)
T TIGR03343 159 EPSYETLKQMLNVFLFD--------------------QSLITEELLQGRWENIQRQPEHLKNFLISSQK---APLSTWDV 215 (282)
T ss_pred CCCHHHHHHHHhhCccC--------------------cccCcHHHHHhHHHHhhcCHHHHHHHHHhccc---cccccchH
Confidence 00011111111110000 0001111111000 000000000 00001111
Q ss_pred chhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 295 NWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 295 ~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
... +.++++|+++++|++|.+++++...+ +.+..|++ ++++++++||+++.|+|+++.+.|.+||+.
T Consensus 216 ~~~------l~~i~~Pvlli~G~~D~~v~~~~~~~------~~~~~~~~-~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 216 TAR------LGEIKAKTLVTWGRDDRFVPLDHGLK------LLWNMPDA-QLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred HHH------HhhCCCCEEEEEccCCCcCCchhHHH------HHHhCCCC-EEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 111 22889999999999999999887765 66778998 999999999999999999999999999963
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.1e-34 Score=236.60 Aligned_cols=268 Identities=22% Similarity=0.345 Sum_probs=172.1
Q ss_pred cceeEEEECCeEEEeeecCCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHH
Q 017221 60 IQHKVVNVNGINMHVAEKGQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~~~g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
++..+++++|.+++|...|++|+|||+||++.+...|+.+++.|.+. |+|+++|+||||.|+.+.+ ..++.+++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~ 91 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARVI 91 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHHH
Confidence 44678889999999999999999999999999999999999999875 9999999999999987653 357889999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchH
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIE 219 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
.+++++++.+ +++++||||||.+++.++..+|++|+++|++++...+... .....+...... .+ ...
T Consensus 92 ~~~~~~~~~~--~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~--------~~-~~~ 158 (286)
T PRK03204 92 GEFVDHLGLD--RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT--LAMKAFSRVMSS--------PP-VQY 158 (286)
T ss_pred HHHHHHhCCC--CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc--hhHHHHHHHhcc--------cc-chh
Confidence 9999999888 9999999999999999999999999999998875422111 000111110000 00 000
Q ss_pred HHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCcccee----eeeeccc-c
Q 017221 220 AEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGI----NYYRNIE-L 294 (375)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~ 294 (375)
..+ ....+..+++..... ...+.+....+............. ..+.... .
T Consensus 159 ~~~---~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (286)
T PRK03204 159 AIL---RRNFFVERLIPAGTE----------------------HRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPL 213 (286)
T ss_pred hhh---hhhHHHHHhcccccc----------------------CCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHH
Confidence 000 001111111111000 001111111111000000000000 0000000 0
Q ss_pred chhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 295 NWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 295 ~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
............+++|+++|+|++|.++++....+. +.+.+|+. ++++++++||++++|+|+++++.|.+||.
T Consensus 214 ~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~-----~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 214 LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPR-----LRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHH-----HHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 000000000002389999999999998876543221 67888998 99999999999999999999999999973
No 10
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=4.8e-33 Score=228.57 Aligned_cols=245 Identities=16% Similarity=0.188 Sum_probs=157.7
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChH
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWG 161 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~G 161 (375)
.|||+||++.+...|+.+++.|.+.||+|+++|+||||.|+.+.. ..++.+++++|+.++++.++.. ++++++|||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhSmG 82 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPD-HKVILVGHSIG 82 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCC-CCEEEEecCcc
Confidence 599999999999999999999987789999999999999976542 3578999999999999998762 28999999999
Q ss_pred HHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcC---CceEEEeecCCcchHHHHHhcCcHHHHHHHHhhc
Q 017221 162 ALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYG---DDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYR 238 (375)
Q Consensus 162 g~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (375)
|.+++.++.++|++|+++|++++......... ......... ..+............... .....+....+..
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~- 157 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSII--SPRLKNVMEGTEKIWDYTFGEGPDKPPTGI--MMKPEFVRHYYYN- 157 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCc--cHHHHhhhhccccceeeeeccCCCCCcchh--hcCHHHHHHHHhc-
Confidence 99999999999999999999998643211100 001100000 000000000000000000 0000011000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCC
Q 017221 239 NPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDL 318 (375)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~ 318 (375)
....+................ +.... ... ..+..+++|+++++|++
T Consensus 158 -------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~--~~~~~i~vP~lvi~g~~ 203 (255)
T PLN02965 158 -------------------------QSPLEDYTLSSKLLRPAPVRA----FQDLD---KLP--PNPEAEKVPRVYIKTAK 203 (255)
T ss_pred -------------------------CCCHHHHHHHHHhcCCCCCcc----hhhhh---hcc--chhhcCCCCEEEEEcCC
Confidence 000011111111111110100 00000 000 01126899999999999
Q ss_pred CcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 319 DLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 319 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
|..+|+...+. +.+..+++ ++++++++||++++|+|+++++.|.+|+++
T Consensus 204 D~~~~~~~~~~------~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 204 DNLFDPVRQDV------MVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCCCCHHHHHH------HHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 99999876655 77899998 999999999999999999999999999876
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=7.2e-33 Score=239.93 Aligned_cols=278 Identities=17% Similarity=0.238 Sum_probs=171.2
Q ss_pred cceeEEEECCeEEEeeecCC-----CCEEEEEcCCCCChhhHHH-HHHHHH---hCCcEEEEeCCCCCCCCCCCCCCccc
Q 017221 60 IQHKVVNVNGINMHVAEKGQ-----GPLILFIHGFPLLWYSWRH-QITALA---SLGYRAVAPDLRGYGDTDAPAEVPSY 130 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~~~~~-~~~~L~---~~g~~v~~~d~~G~G~S~~~~~~~~~ 130 (375)
....+.+.+|.+++|...++ +|+|||+||++++...|.. +++.|. +.+|+|+++|+||||.|+.+.+ ..+
T Consensus 176 ~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~y 254 (481)
T PLN03087 176 FCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLY 254 (481)
T ss_pred eeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcC
Confidence 44567888899999998875 4799999999999999975 446665 3579999999999999987643 458
Q ss_pred cHhHHHHHHH-HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhh-HHhhcCCceE
Q 017221 131 TCLHLVGDVI-ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQV-FKAVYGDDYY 208 (375)
Q Consensus 131 ~~~~~~~d~~-~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 208 (375)
+++++++++. .+++.++.+ +++++||||||.+++.+|.++|++|+++|+++++............. .........+
T Consensus 255 tl~~~a~~l~~~ll~~lg~~--k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVK--SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVW 332 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCC--CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccC
Confidence 9999999995 889999988 99999999999999999999999999999999865533221111111 1111000000
Q ss_pred EEeecCCcchHHHHHhcCc---------HHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhh
Q 017221 209 ICRFQEPGEIEAEFAQMGT---------ETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEK 279 (375)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (375)
............+..... ......+...... ..........+......
T Consensus 333 -~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~l~~~~~~~~~~ 389 (481)
T PLN03087 333 -PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTR----------------------NRMRTFLIEGFFCHTHN 389 (481)
T ss_pred -CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhh----------------------hhhhHHHHHHHHhccch
Confidence 000000000000000000 0000000000000 00000000000000000
Q ss_pred cCccce---e-eeeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCC
Q 017221 280 AGFTGG---I-NYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHF 355 (375)
Q Consensus 280 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 355 (375)
...... . ......+...... ..++++|+++++|++|.++|++..+. +++.+|++ ++++++++||+
T Consensus 390 ~~~~~l~~~i~~~~~~l~~~l~~l----~~~I~vPtLII~Ge~D~ivP~~~~~~------la~~iP~a-~l~vI~~aGH~ 458 (481)
T PLN03087 390 AAWHTLHNIICGSGSKLDGYLDHV----RDQLKCDVAIFHGGDDELIPVECSYA------VKAKVPRA-RVKVIDDKDHI 458 (481)
T ss_pred hhHHHHHHHHhchhhhhhhHHHHH----HHhCCCCEEEEEECCCCCCCHHHHHH------HHHhCCCC-EEEEeCCCCCc
Confidence 000000 0 0000000000000 01689999999999999999887765 67888999 99999999999
Q ss_pred CCc-cChhHHHHHHHHHHhh
Q 017221 356 INE-EKPDEVNKHIYNFFQK 374 (375)
Q Consensus 356 ~~~-e~p~~~~~~i~~fl~~ 374 (375)
++. |+|+++++.|.+|.+.
T Consensus 459 ~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 459 TIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred chhhcCHHHHHHHHHHHhhc
Confidence 975 9999999999999864
No 12
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-32 Score=233.05 Aligned_cols=119 Identities=21% Similarity=0.332 Sum_probs=100.2
Q ss_pred EECCeEEEeeecCC---------CCEEEEEcCCCCChhhHH--HHHHHH-------HhCCcEEEEeCCCCCCCCCCCCCC
Q 017221 66 NVNGINMHVAEKGQ---------GPLILFIHGFPLLWYSWR--HQITAL-------ASLGYRAVAPDLRGYGDTDAPAEV 127 (375)
Q Consensus 66 ~~~g~~l~~~~~g~---------~~~il~~hG~~~~~~~~~--~~~~~L-------~~~g~~v~~~d~~G~G~S~~~~~~ 127 (375)
+++|.+++|...|+ +|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+.+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 56899999999986 789999999999988875 555554 134699999999999999865421
Q ss_pred -----ccccHhHHHHHHHHHH-HHhcCCCCcEE-EEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 128 -----PSYTCLHLVGDVIALL-DAVAADQEKVF-VVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 128 -----~~~~~~~~~~d~~~~l-~~l~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
..++++++++++.+++ ++++++ +++ ++||||||++|+.+|.++|++|+++|++++..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~--~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK--HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC--ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 2478999999988855 888888 875 89999999999999999999999999998754
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.3e-32 Score=230.20 Aligned_cols=266 Identities=26% Similarity=0.378 Sum_probs=173.0
Q ss_pred eeEEEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHH
Q 017221 62 HKVVNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
.++++++|.+++|...|+ +|+|||+||++++...|..+++.|++. |+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l 85 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDL 85 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccc-cCCCHHHHHHHH
Confidence 567899999999999886 789999999999999999999999874 9999999999999987653 367999999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCc-hhhhHHhhcCCceEEEeecCCcch
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMK-PLQVFKAVYGDDYYICRFQEPGEI 218 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
.+++++++.+ +++++||||||.+++.++.++|++++++|++++.......... ....+...... .+. .
T Consensus 86 ~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~ 154 (278)
T TIGR03056 86 SALCAAEGLS--PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC--------NPF-T 154 (278)
T ss_pred HHHHHHcCCC--CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh--------ccc-c
Confidence 9999999887 8999999999999999999999999999999986543221000 00000000000 000 0
Q ss_pred HHHHHh-cCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcC-ccceeeeeeccccch
Q 017221 219 EAEFAQ-MGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAG-FTGGINYYRNIELNW 296 (375)
Q Consensus 219 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 296 (375)
...... ......+..+..... ..........+........ ..............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 210 (278)
T TIGR03056 155 PPMMSRGAADQQRVERLIRDTG-----------------------SLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLA- 210 (278)
T ss_pred hHHHHhhcccCcchhHHhhccc-----------------------cccccchhhHHHHhhcCchhhhHHHHHhhccccc-
Confidence 000000 000000011110000 0000011111111000000 00000000000000
Q ss_pred hhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 297 ELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 297 ~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
.. ...+.++++|+++++|++|.++|++..+. +.+..++. ++++++++||+++.|+|+++++.|.+|++
T Consensus 211 ~~--~~~~~~i~~P~lii~g~~D~~vp~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 211 PL--NRDLPRITIPLHLIAGEEDKAVPPDESKR------AATRVPTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ch--hhhcccCCCCEEEEEeCCCcccCHHHHHH------HHHhccCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 00 00122789999999999999999876655 56777888 99999999999999999999999999985
No 14
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.3e-32 Score=226.67 Aligned_cols=243 Identities=20% Similarity=0.283 Sum_probs=155.5
Q ss_pred EEEeeecCCCC-EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 71 NMHVAEKGQGP-LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 71 ~l~~~~~g~~~-~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
.++|...|+++ +|||+||+++++..|..+++.|.++ |+|+++|+||||.|+... .++.+++++++.+ +..+
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAPD 74 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCCC
Confidence 36788888875 6999999999999999999999876 999999999999997543 4677777776653 4555
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCC--c-hhhhHHhhcCCceEEEeecCCcchHHHHHhcC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNM--K-PLQVFKAVYGDDYYICRFQEPGEIEAEFAQMG 226 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (375)
+++++||||||.+++.+|.++|++|+++|++++......... . ........ ...+. ..
T Consensus 75 --~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~ 135 (256)
T PRK10349 75 --KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGF----------------QQQLS-DD 135 (256)
T ss_pred --CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHH----------------HHHHH-hc
Confidence 999999999999999999999999999999987543211100 0 00000000 00000 01
Q ss_pred cHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccc------eeeeeeccccchhhcc
Q 017221 227 TETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTG------GINYYRNIELNWELLA 300 (375)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 300 (375)
....++.++........ ........+........... ....+...+...
T Consensus 136 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 190 (256)
T PRK10349 136 FQRTVERFLALQTMGTE---------------------TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ---- 190 (256)
T ss_pred hHHHHHHHHHHHHccCc---------------------hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHH----
Confidence 11122222211000000 00000111111000000000 000001111111
Q ss_pred cCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 301 PWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 301 ~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
.+.++++|+++++|++|.++|.+.... +.+..+++ ++++++++||++++|+|++|++.+.+|-++
T Consensus 191 --~l~~i~~P~lii~G~~D~~~~~~~~~~------~~~~i~~~-~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 191 --PLQNVSMPFLRLYGYLDGLVPRKVVPM------LDKLWPHS-ESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred --HHhhcCCCeEEEecCCCccCCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 122889999999999999998876554 66778999 999999999999999999999999998653
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=5.5e-32 Score=232.04 Aligned_cols=124 Identities=20% Similarity=0.264 Sum_probs=105.4
Q ss_pred eEEEECCeEEEeeecCC-----CCEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHH
Q 017221 63 KVVNVNGINMHVAEKGQ-----GPLILFIHGFPLLWY-SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLV 136 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~-~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~ 136 (375)
..++.+|.+++|..+++ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. ...++++++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~ 143 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLV 143 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHH
Confidence 45667899999887653 468999999998865 46889999998899999999999999986542 235889999
Q ss_pred HHHHHHHHHhcCC----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 137 GDVIALLDAVAAD----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 137 ~d~~~~l~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+|+.++++.++.+ ..+++|+||||||.+++.++.++|++++++|+++|...
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 9999999888643 34799999999999999999999999999999998664
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=5.7e-31 Score=224.16 Aligned_cols=264 Identities=24% Similarity=0.314 Sum_probs=169.6
Q ss_pred EEEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCC--ccccHhHHHHHH
Q 017221 64 VVNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEV--PSYTCLHLVGDV 139 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~--~~~~~~~~~~d~ 139 (375)
.++.+|.+++|...|+ +|+|||+||++++...|+.+++.|++ +|+|+++|+||||.|+.+... ..++++++++++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 4568899999999885 68999999999999999999999986 599999999999999876531 257999999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchH
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIE 219 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
.+++++++++ +++++|||+||.+++.++.++|++|+++|+++++........ ...+...... ...
T Consensus 188 ~~~i~~l~~~--~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~--p~~l~~~~~~-----------l~~ 252 (383)
T PLN03084 188 ESLIDELKSD--KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKL--PSTLSEFSNF-----------LLG 252 (383)
T ss_pred HHHHHHhCCC--CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccc--hHHHHHHHHH-----------Hhh
Confidence 9999999998 999999999999999999999999999999998754221000 0000000000 000
Q ss_pred HHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCcc-----ceeeeee-ccc
Q 017221 220 AEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFT-----GGINYYR-NIE 293 (375)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~ 293 (375)
..+.. .........+... ....+.++....+...+...+.. .....+. ...
T Consensus 253 ~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~ 309 (383)
T PLN03084 253 EIFSQ-DPLRASDKALTSC----------------------GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELK 309 (383)
T ss_pred hhhhc-chHHHHhhhhccc----------------------CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccc
Confidence 00000 0000000000000 00001112211111111110000 0000000 000
Q ss_pred c-chhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHH
Q 017221 294 L-NWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFF 372 (375)
Q Consensus 294 ~-~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 372 (375)
. ...........++++|+++++|++|.+++.+..++ +.+. ++. ++++++++||++++|+|+++++.|.+||
T Consensus 310 ~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~------~a~~-~~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl 381 (383)
T PLN03084 310 KYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED------FCKS-SQH-KLIELPMAGHHVQEDCGEELGGIISGIL 381 (383)
T ss_pred hhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH------HHHh-cCC-eEEEECCCCCCcchhCHHHHHHHHHHHh
Confidence 0 00000000001679999999999999998876655 3333 477 9999999999999999999999999999
Q ss_pred hh
Q 017221 373 QK 374 (375)
Q Consensus 373 ~~ 374 (375)
++
T Consensus 382 ~~ 383 (383)
T PLN03084 382 SK 383 (383)
T ss_pred hC
Confidence 74
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=1.3e-30 Score=221.41 Aligned_cols=280 Identities=15% Similarity=0.130 Sum_probs=172.9
Q ss_pred ccccceeEEEECCeEEEeeecCC---CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCC----cc
Q 017221 57 EEDIQHKVVNVNGINMHVAEKGQ---GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEV----PS 129 (375)
Q Consensus 57 ~~~~~~~~~~~~g~~l~~~~~g~---~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~----~~ 129 (375)
....+..++..+|.+++|...++ +++||++||++++...|..++..|.++||+|+++|+||||.|+.+... ..
T Consensus 28 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 28 RQREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred hhccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 33445677888999999998753 579999999999999999999999999999999999999999764311 12
Q ss_pred ccHhHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCce
Q 017221 130 YTCLHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDY 207 (375)
Q Consensus 130 ~~~~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (375)
.+++++++|+.++++.+.. +..+++++||||||.+++.++.++|+.++++|+++|............ ...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~--~~~------ 179 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWM--ARR------ 179 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHH--HHH------
Confidence 5889999999999988722 123899999999999999999999999999999998654321110000 000
Q ss_pred EEEeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCC--CHHHHHHHHHHhhhcCccc-
Q 017221 208 YICRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWL--SEEDVKYYASKYEKAGFTG- 284 (375)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 284 (375)
+. ...... ...... .......+.. ......++ ..+....+.+.+.......
T Consensus 180 --------------~~-----~~~~~~-~~~~~~-~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (330)
T PRK10749 180 --------------IL-----NWAEGH-PRIRDG-YAIGTGRWRP-----LPFAINVLTHSRERYRRNLRFYADDPELRV 233 (330)
T ss_pred --------------HH-----HHHHHh-cCCCCc-CCCCCCCCCC-----CCcCCCCCCCCHHHHHHHHHHHHhCCCccc
Confidence 00 000000 000000 0000000000 00001111 1222222222222111100
Q ss_pred ---eeeeeeccccc-hhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCcccc---ccCCceeEEEecCCCCCCC
Q 017221 285 ---GINYYRNIELN-WELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKK---AVPLLEEVIVMEGVGHFIN 357 (375)
Q Consensus 285 ---~~~~~~~~~~~-~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~gH~~~ 357 (375)
...+....... .... ..+.++++|+|+++|++|.+++++....+.+. +.+ ..+++ +++++||+||.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~--~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~--l~~~~~~~~~~-~l~~~~gagH~~~ 308 (330)
T PRK10749 234 GGPTYHWVRESILAGEQVL--AGAGDITTPLLLLQAEEERVVDNRMHDRFCEA--RTAAGHPCEGG-KPLVIKGAYHEIL 308 (330)
T ss_pred CCCcHHHHHHHHHHHHHHH--hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHH--HhhcCCCCCCc-eEEEeCCCcchhh
Confidence 00000000000 0000 11227899999999999999999876654321 211 12455 8999999999999
Q ss_pred ccCh---hHHHHHHHHHHhhC
Q 017221 358 EEKP---DEVNKHIYNFFQKF 375 (375)
Q Consensus 358 ~e~p---~~~~~~i~~fl~~~ 375 (375)
.|.+ +++.+.|.+||+++
T Consensus 309 ~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 309 FEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hCCcHHHHHHHHHHHHHHhhc
Confidence 8875 67889999999874
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.98 E-value=1.5e-30 Score=214.65 Aligned_cols=239 Identities=19% Similarity=0.258 Sum_probs=155.8
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
++|+|||+||++++...|..++..|.+. |+|+++|+||||.|..+. .++++++++|+.++++.++.+ +++++||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~--~~~lvGh 88 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIE--KATFIGH 88 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCC--ceEEEEE
Confidence 3689999999999999999999999775 999999999999998654 478999999999999999888 8999999
Q ss_pred ChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHhhc
Q 017221 159 DWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYR 238 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (375)
||||.+++.+|.++|++|+++|++++........ ......... ... .... ..........+...
T Consensus 89 S~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~-~~~~~~~~~-~~~---~~~~-----------~~~~~~~~~~~~~~ 152 (255)
T PRK10673 89 SMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR-RHDEIFAAI-NAV---SEAG-----------ATTRQQAAAIMRQH 152 (255)
T ss_pred CHHHHHHHHHHHhCHhhcceEEEEecCCCCccch-hhHHHHHHH-HHh---hhcc-----------cccHHHHHHHHHHh
Confidence 9999999999999999999999998643321110 000000000 000 0000 00000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHH-hhhcCccceee-eeeccccchhhcccCcCCcccccEEEEec
Q 017221 239 NPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASK-YEKAGFTGGIN-YYRNIELNWELLAPWTGAQIKVPVKFIVG 316 (375)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~lii~g 316 (375)
+..+....+... +.......... ...... .......+.++++|+++|+|
T Consensus 153 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~G 203 (255)
T PRK10673 153 --------------------------LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYP---HIVGWEKIPAWPHPALFIRG 203 (255)
T ss_pred --------------------------cCCHHHHHHHHhcCCcceeEeeHHHHHHhHH---HHhCCcccCCCCCCeEEEEC
Confidence 000000000000 00000000000 000000 00000011277899999999
Q ss_pred CCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhhC
Q 017221 317 DLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 317 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 375 (375)
++|..++++.... +.+..+++ ++++++++||++++++|+++++.|.+||+++
T Consensus 204 ~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 204 GNSPYVTEAYRDD------LLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCCCHHHHHH------HHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 9999998776655 67788998 9999999999999999999999999999864
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=8.2e-31 Score=216.71 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=159.0
Q ss_pred EeeecCC----CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC
Q 017221 73 HVAEKGQ----GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 73 ~~~~~g~----~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
+|...|+ +|+|||+||+++++..|..+++.|.+ ||+|+++|+||||.|..+.. ..++++++++++.++++.++.
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhCC
Confidence 4555552 68999999999999999999988876 59999999999999986543 567999999999999999988
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcH
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTE 228 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
+ +++++||||||.+++.++.++|++|+++|++++.................... .....
T Consensus 80 ~--~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 138 (257)
T TIGR03611 80 E--RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQ-------------------HAGPE 138 (257)
T ss_pred C--cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHh-------------------ccCcc
Confidence 8 99999999999999999999999999999998755432111000000000000 00000
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCccc
Q 017221 229 TVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIK 308 (375)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (375)
.+............ ...... ........................... ...+... .+.+++
T Consensus 139 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~------~~~~i~ 198 (257)
T TIGR03611 139 AYVHAQALFLYPAD-WISENA-ARLAADEAHALAHFPGKANVLRRINAL------------EAFDVSA------RLDRIQ 198 (257)
T ss_pred hhhhhhhhhhcccc-Hhhccc-hhhhhhhhhcccccCccHHHHHHHHHH------------HcCCcHH------HhcccC
Confidence 00000000000000 000000 000000000000000000000000000 0000001 112789
Q ss_pred ccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 309 VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 309 ~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
+|+++++|++|..+|++...+ +.+..++. +++.++++||++++++|+++.+.|.+||++
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLR------LAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred ccEEEEecCcCcccCHHHHHH------HHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999887665 55667888 999999999999999999999999999964
No 20
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.6e-31 Score=228.43 Aligned_cols=122 Identities=21% Similarity=0.313 Sum_probs=100.4
Q ss_pred cceeEEEECCeEEEeeecCC-CCEEEEEcCCCCChh------------hHHHHHH---HHHhCCcEEEEeCCCCCCCCCC
Q 017221 60 IQHKVVNVNGINMHVAEKGQ-GPLILFIHGFPLLWY------------SWRHQIT---ALASLGYRAVAPDLRGYGDTDA 123 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~~~g~-~~~il~~hG~~~~~~------------~~~~~~~---~L~~~g~~v~~~d~~G~G~S~~ 123 (375)
..-...+.+|.+++|...|+ ++++||+||+.++.. .|..++. .|...+|+|+++|+||||.|..
T Consensus 36 ~~~~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~ 115 (343)
T PRK08775 36 LSMRHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD 115 (343)
T ss_pred eeecCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC
Confidence 33445566899999999995 666777777766655 6888886 5643459999999999998842
Q ss_pred CCCCccccHhHHHHHHHHHHHHhcCCCCc-EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 124 PAEVPSYTCLHLVGDVIALLDAVAADQEK-VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 124 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
..++.+++++|+.+++++++++ + ++++||||||++|+.+|.++|++|+++|++++...
T Consensus 116 ----~~~~~~~~a~dl~~ll~~l~l~--~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 116 ----VPIDTADQADAIALLLDALGIA--RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred ----CCCCHHHHHHHHHHHHHHcCCC--cceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 2467889999999999999997 6 47999999999999999999999999999998654
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=1.9e-30 Score=216.21 Aligned_cols=257 Identities=18% Similarity=0.214 Sum_probs=158.9
Q ss_pred eEEEECCeEEEeeecCC----CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHH
Q 017221 63 KVVNVNGINMHVAEKGQ----GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGD 138 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g~----~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d 138 (375)
.++..||.+++|..+.+ .+.|+++||+++++..|..+++.|+++||+|+++|+||||.|+.... ...++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-MIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-CcCCHHHHHHH
Confidence 35677999999876533 45677779999999999999999999999999999999999975431 23466677777
Q ss_pred HHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCc
Q 017221 139 VIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPG 216 (375)
Q Consensus 139 ~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
+.+.++.+.. ...+++++||||||.+|+.+|.++|+.++++|+++|....... .....+...
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~--~~~~~~~~~-------------- 146 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV--PRLNLLAAK-------------- 146 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc--cHHHHHHHH--------------
Confidence 7777766532 2248999999999999999999999999999999986542111 000000000
Q ss_pred chHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccc--eeeeeecc-c
Q 017221 217 EIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTG--GINYYRNI-E 293 (375)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~ 293 (375)
..... .+.... .. . ...++................... ...+.... .
T Consensus 147 --------------~~~~~---~~~~~~-~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (276)
T PHA02857 147 --------------LMGIF---YPNKIV-GK-L-----------CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLK 196 (276)
T ss_pred --------------HHHHh---CCCCcc-CC-C-----------CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHH
Confidence 00000 000000 00 0 000000000000000000000000 00000000 0
Q ss_pred cchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCcccccc-CCceeEEEecCCCCCCCccCh---hHHHHHHH
Q 017221 294 LNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAV-PLLEEVIVMEGVGHFINEEKP---DEVNKHIY 369 (375)
Q Consensus 294 ~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~ 369 (375)
...... ..+.++++|+++++|++|.++|++...++ .+.. ++. ++++++++||.++.|.+ +++.+.+.
T Consensus 197 ~~~~~~--~~l~~i~~Pvliv~G~~D~i~~~~~~~~l------~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~~~~~~ 267 (276)
T PHA02857 197 ATNKVR--KIIPKIKTPILILQGTNNEISDVSGAYYF------MQHANCNR-EIKIYEGAKHHLHKETDEVKKSVMKEIE 267 (276)
T ss_pred HHHHHH--HhcccCCCCEEEEecCCCCcCChHHHHHH------HHHccCCc-eEEEeCCCcccccCCchhHHHHHHHHHH
Confidence 000000 01127899999999999999999887764 3333 456 99999999999998866 67999999
Q ss_pred HHHhhC
Q 017221 370 NFFQKF 375 (375)
Q Consensus 370 ~fl~~~ 375 (375)
+||+++
T Consensus 268 ~~l~~~ 273 (276)
T PHA02857 268 TWIFNR 273 (276)
T ss_pred HHHHHh
Confidence 999863
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=1.2e-30 Score=213.31 Aligned_cols=100 Identities=21% Similarity=0.198 Sum_probs=90.7
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
+|+|||+||+++++..|..+++.| + +|+|+++|+||||.|+.+. ..+++++++|+.++++.++.+ +++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~--~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNIL--PYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCC--CeEEEEEC
Confidence 578999999999999999999988 4 5999999999999998755 348999999999999999888 99999999
Q ss_pred hHHHHHHHHHHhCCCc-cceEEEEccCC
Q 017221 160 WGALIAWYLCLFRPDR-VKALVNLSVVF 186 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~~-v~~lil~~~~~ 186 (375)
|||.+|+.+|.++|+. |++++++++..
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999999765 99999988654
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=2.4e-30 Score=206.08 Aligned_cols=287 Identities=22% Similarity=0.324 Sum_probs=173.4
Q ss_pred hhccCCCcccccceeEEEEC-CeEEEeeecC----CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCC
Q 017221 49 EKNIGSSMEEDIQHKVVNVN-GINMHVAEKG----QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDA 123 (375)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~g----~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~ 123 (375)
+.++.+.........++.+. +..+...... .++++|++||+|++...|..-++.|++. ++|+++|++|+|.|++
T Consensus 54 e~ril~~~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSR 132 (365)
T KOG4409|consen 54 EKRILSSVPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSR 132 (365)
T ss_pred HHhhhhhcCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCC
Confidence 34455555555556666654 3344433322 2689999999999999999999999985 9999999999999998
Q ss_pred CCCC--ccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCC-Cch-----
Q 017221 124 PAEV--PSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPN-MKP----- 195 (375)
Q Consensus 124 ~~~~--~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~----- 195 (375)
+.-. .......+++-+++.....+++ +.+|+|||+||++|..||.+||++|+.+||++|...+..+. ...
T Consensus 133 P~F~~d~~~~e~~fvesiE~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 133 PKFSIDPTTAEKEFVESIEQWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCCCCcccchHHHHHHHHHHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 8722 2334557888999999999999 99999999999999999999999999999999998876542 110
Q ss_pred hhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHH
Q 017221 196 LQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYAS 275 (375)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (375)
...++.... +.....|...-+.+... ...++.++.... ....+....++.+..|.-
T Consensus 211 ~~w~~~~~~----~~~~~nPl~~LR~~Gp~-Gp~Lv~~~~~d~-------------------~~k~~~~~~ed~l~~YiY 266 (365)
T KOG4409|consen 211 PEWYKALFL----VATNFNPLALLRLMGPL-GPKLVSRLRPDR-------------------FRKFPSLIEEDFLHEYIY 266 (365)
T ss_pred hHHHhhhhh----hhhcCCHHHHHHhcccc-chHHHhhhhHHH-------------------HHhccccchhHHHHHHHH
Confidence 011100000 00011111111111111 111222221111 011111122233233332
Q ss_pred HhhhcCcccee--ee------eeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCcccc--ccCCcee
Q 017221 276 KYEKAGFTGGI--NY------YRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKK--AVPLLEE 345 (375)
Q Consensus 276 ~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~ 345 (375)
........... .. +.......++... +-+||+++|+|++|.+-...... +.+ ....+ +
T Consensus 267 ~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l----~~~~pv~fiyG~~dWmD~~~g~~-------~~~~~~~~~~-~ 334 (365)
T KOG4409|consen 267 HCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL----KKDVPVTFIYGDRDWMDKNAGLE-------VTKSLMKEYV-E 334 (365)
T ss_pred HhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh----ccCCCEEEEecCcccccchhHHH-------HHHHhhcccc-e
Confidence 22211111000 00 0000111111111 34699999999999886543322 222 22234 9
Q ss_pred EEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 346 VIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 346 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
.+++|++||.+++++|+.|++.+.+++++
T Consensus 335 ~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 335 IIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred EEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999875
No 24
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3.7e-30 Score=219.64 Aligned_cols=125 Identities=18% Similarity=0.292 Sum_probs=103.2
Q ss_pred eeEEEECCeEEEeeecC------CCCEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 62 HKVVNVNGINMHVAEKG------QGPLILFIHGFPLLWY-SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g------~~~~il~~hG~~~~~~-~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
..+...||.+++|..++ ++++|||+||++.+.. .|..++..|.++||+|+++|+||||.|+.... ...+.++
T Consensus 35 ~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~ 113 (330)
T PLN02298 35 SFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDL 113 (330)
T ss_pred ceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHH
Confidence 34566799999997653 2457999999986643 56677888999999999999999999975432 2457889
Q ss_pred HHHHHHHHHHHhcCC----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 135 LVGDVIALLDAVAAD----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+++|+.++++.++.. ..+++|+||||||.+++.++.++|++|+++|+++|...
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 999999999998653 24799999999999999999999999999999998754
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=7.7e-30 Score=210.23 Aligned_cols=257 Identities=20% Similarity=0.185 Sum_probs=164.1
Q ss_pred ECCeEEEeeec-CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 67 VNGINMHVAEK-GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 67 ~~g~~l~~~~~-g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
-+|.+++|... +++|+|||+||++++...|..++..|.++||+|+++|+||||.|..... ...+++++++++.++++.
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHh
Confidence 36888888776 5579999999999999999999999998899999999999998854432 347999999999999998
Q ss_pred hc-CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCC-----ceEEEeecC-Ccch
Q 017221 146 VA-ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGD-----DYYICRFQE-PGEI 218 (375)
Q Consensus 146 l~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~ 218 (375)
+. .+ +++++||||||.++..++.++|++|+++|++++........ ....+...++. ..+...+.. +...
T Consensus 83 l~~~~--~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
T PLN02211 83 LPENE--KVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ--TDEDMKDGVPDLSEFGDVYELGFGLGPDQP 158 (273)
T ss_pred cCCCC--CEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC--HHHHHhccccchhhhccceeeeeccCCCCC
Confidence 85 35 99999999999999999999999999999998754321110 11111000000 000000000 0000
Q ss_pred HHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhh
Q 017221 219 EAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWEL 298 (375)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
.. .......+...++... ...+........ ....... .+...... ..
T Consensus 159 ~~--~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~ 205 (273)
T PLN02211 159 PT--SAIIKKEFRRKILYQM--------------------------SPQEDSTLAAML-LRPGPIL---ALRSARFE-EE 205 (273)
T ss_pred Cc--eeeeCHHHHHHHHhcC--------------------------CCHHHHHHHHHh-cCCcCcc---cccccccc-cc
Confidence 00 0000111111111110 111221111111 1110000 01110000 00
Q ss_pred cccCcCCcc-cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 299 LAPWTGAQI-KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 299 ~~~~~~~~~-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
. .++ ++|+++|.|++|..+|++..+. +.+..++. +++.++ +||.+++++|+++++.|.++.+.
T Consensus 206 ~-----~~~~~vP~l~I~g~~D~~ip~~~~~~------m~~~~~~~-~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 206 T-----GDIDKVPRVYIKTLHDHVVKPEQQEA------MIKRWPPS-QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred c-----cccCccceEEEEeCCCCCCCHHHHHH------HHHhCCcc-EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 0 034 7899999999999999987665 56777888 899996 79999999999999999988653
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=2.2e-30 Score=213.32 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=159.8
Q ss_pred EEeeecCC---CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC
Q 017221 72 MHVAEKGQ---GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 72 l~~~~~g~---~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
++|...|+ +|+|||+||++++...|.++++.|.+ ||+|+++|+||||.|+.+. ..++++++++|+.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 45655553 57899999999999999999998865 7999999999999997654 467999999999999999988
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcH
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTE 228 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
+ +++++|||+||.+++.+|.++|++|+++|+++++....... ......... ......
T Consensus 79 ~--~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-~~~~~~~~~--------------------~~~~~~ 135 (251)
T TIGR02427 79 E--RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-SWNARIAAV--------------------RAEGLA 135 (251)
T ss_pred C--ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh-hHHHHHhhh--------------------hhccHH
Confidence 7 99999999999999999999999999999998764422110 000000000 000000
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccc---eeeeeeccccchhhcccCcCC
Q 017221 229 TVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTG---GINYYRNIELNWELLAPWTGA 305 (375)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 305 (375)
................ .........+...+....... ....+...+.... +.
T Consensus 136 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 190 (251)
T TIGR02427 136 ALADAVLERWFTPGFR-------------------EAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDR------LG 190 (251)
T ss_pred HHHHHHHHHHcccccc-------------------cCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHH------hh
Confidence 1111111100000000 000011111111111111000 0000000000011 12
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
++++|+++++|++|..+|.+.... +.+..++. ++++++++||+.++++|+++.+.|.+|++
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVRE------IADLVPGA-RFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHH------HHHhCCCc-eEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 789999999999999999886655 55667887 99999999999999999999999999984
No 27
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=3.9e-31 Score=226.31 Aligned_cols=281 Identities=15% Similarity=0.112 Sum_probs=158.6
Q ss_pred EECCeEEEeeecCC----C-CEEEEEcCCCCChhhHHHHH---HHHHhCCcEEEEeCCCCCCCCCCCCCC-ccccHhH--
Q 017221 66 NVNGINMHVAEKGQ----G-PLILFIHGFPLLWYSWRHQI---TALASLGYRAVAPDLRGYGDTDAPAEV-PSYTCLH-- 134 (375)
Q Consensus 66 ~~~g~~l~~~~~g~----~-~~il~~hG~~~~~~~~~~~~---~~L~~~g~~v~~~d~~G~G~S~~~~~~-~~~~~~~-- 134 (375)
+++|.+++|...|+ + |+||++||++++...|..++ +.|...+|+|+++|+||||.|+.+... ..++.++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 45789999998875 2 56777777777777776544 366655799999999999999865421 1234332
Q ss_pred ---HHHHHHH----HHHHhcCCCCc-EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhc-CC
Q 017221 135 ---LVGDVIA----LLDAVAADQEK-VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVY-GD 205 (375)
Q Consensus 135 ---~~~d~~~----~l~~l~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~-~~ 205 (375)
+++|+.+ ++++++++ + ++|+||||||++|+.+|.++|++|+++|++++..................+ ..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~--~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~ 179 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIE--RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTAD 179 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCC--ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhC
Confidence 4566655 66789998 8 579999999999999999999999999999876542111000000010000 00
Q ss_pred ceEEEeecCCcchHHHHHhc----CcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCC-HHHHHHHHHHh-hh
Q 017221 206 DYYICRFQEPGEIEAEFAQM----GTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLS-EEDVKYYASKY-EK 279 (375)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~ 279 (375)
..+...+.. ......+... ....+...++...... ...... ++....+.... ..
T Consensus 180 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~ 239 (339)
T PRK07581 180 PAFNGGWYA-EPPERGLRAHARVYAGWGFSQAFYRQELWR-------------------AMGYASLEDFLVGFWEGNFLP 239 (339)
T ss_pred CCCCCCCCC-CcHHHHHHHHHHHHHHHHhHHHHHHhhhcc-------------------ccChhhHHHHHHHHHHHhhcc
Confidence 000000000 0000011000 0000001111100000 000000 11111111111 00
Q ss_pred cCccceeee---eeccc--cch--hhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecC-
Q 017221 280 AGFTGGINY---YRNIE--LNW--ELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEG- 351 (375)
Q Consensus 280 ~~~~~~~~~---~~~~~--~~~--~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 351 (375)
......... ..... ... .......+.++++|+|+|+|++|..+|++.... +.+.++++ +++++++
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~------l~~~ip~a-~l~~i~~~ 312 (339)
T PRK07581 240 RDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEA------EAALIPNA-ELRPIESI 312 (339)
T ss_pred cCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEeCCC
Confidence 000000000 00000 000 000001122789999999999999999876655 66778998 9999998
Q ss_pred CCCCCCccChhHHHHHHHHHHhhC
Q 017221 352 VGHFINEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 352 ~gH~~~~e~p~~~~~~i~~fl~~~ 375 (375)
+||+.++|+|+++.+.|.+||+++
T Consensus 313 ~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 313 WGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CCccccccCcHHHHHHHHHHHHHH
Confidence 999999999999999999999874
No 28
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.6e-30 Score=216.48 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=159.5
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
++++||++|||+++...|+..+..|.+. |+.|+++|++|+|.++..+....++..+.++.+..+....+.. +++++|
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~--~~~lvg 134 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE--PVSLVG 134 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc--ceEEEE
Confidence 5799999999999999999999999876 6999999999999665555445699999999999999999998 899999
Q ss_pred eChHHHHHHHHHHhCCCccceEE---EEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHH
Q 017221 158 HDWGALIAWYLCLFRPDRVKALV---NLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEF 234 (375)
Q Consensus 158 ~S~Gg~~a~~~a~~~p~~v~~li---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (375)
||+||.+|+.+|+.+|+.|+++| +++++................-+.. .............. ..
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~p~~~~~~~-~~ 201 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLS------------ALELLIPLSLTEPV-RL 201 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhcc------------HhhhcCccccccch-hh
Confidence 99999999999999999999999 5555444322211110000000000 00000000000000 00
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHH-----HHhhhcCccceeeeeecccc---chhhcccCcCCc
Q 017221 235 LTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYA-----SKYEKAGFTGGINYYRNIEL---NWELLAPWTGAQ 306 (375)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 306 (375)
+... ....... ......... +...... ..+.+... ..++..... ...... .+
T Consensus 202 ~~~~----------~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~ 261 (326)
T KOG1454|consen 202 VSEG----------LLRCLKV--VYTDPSRLL-EKLLHLLSRPVKEHFHRDAR---LSLFLELLGFDENLLSLI----KK 261 (326)
T ss_pred eeHh----------hhcceee--eccccccch-hhhhhheecccccchhhhhe---eeEEEeccCccchHHHhh----cc
Confidence 0000 0000000 000000000 0000000 00111111 112222221 111111 15
Q ss_pred cc-ccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhhC
Q 017221 307 IK-VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 307 ~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 375 (375)
+. ||+++++|++|.++|.+.+.. +.+..|++ ++++++++||.+++|.|+++++.|..|++.+
T Consensus 262 i~~~pvlii~G~~D~~~p~~~~~~------~~~~~pn~-~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 262 IWKCPVLIIWGDKDQIVPLELAEE------LKKKLPNA-ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ccCCceEEEEcCcCCccCHHHHHH------HHhhCCCc-eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 55 999999999999999986655 56667999 9999999999999999999999999999863
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=6.2e-30 Score=209.84 Aligned_cols=234 Identities=19% Similarity=0.244 Sum_probs=147.0
Q ss_pred CCC-CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 78 GQG-PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 78 g~~-~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|+... ..+++++++++.+.+ .+ +++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~--~~~lv 70 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PD--PAIWL 70 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CC--CeEEE
Confidence 345 8999999999999999999999986 5999999999999987543 457777777766543 24 89999
Q ss_pred EeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCch----hhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHH
Q 017221 157 GHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKP----LQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLK 232 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
||||||.+++.++.++|++++++|++++........... ...+... ...+. ......+.
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~~~~~~~ 133 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGF----------------QQQLS-DDYQRTIE 133 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHH----------------HHHhh-hhHHHHHH
Confidence 999999999999999999999999998765422110000 0000000 00000 00011111
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCcc------ceeeeeeccccchhhcccCcCCc
Q 017221 233 EFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFT------GGINYYRNIELNWELLAPWTGAQ 306 (375)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 306 (375)
.+......... ............+...... .....+...+.... +.+
T Consensus 134 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~ 186 (245)
T TIGR01738 134 RFLALQTLGTP---------------------TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQP------LQN 186 (245)
T ss_pred HHHHHHHhcCC---------------------ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHH------Hhc
Confidence 11111000000 0001111111111000000 00000000111111 128
Q ss_pred ccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHH
Q 017221 307 IKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFF 372 (375)
Q Consensus 307 ~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 372 (375)
+++|+++++|++|.++|++..+. +.+..+++ ++++++++||++++|+|+++++.|.+|+
T Consensus 187 i~~Pvlii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 187 ISVPFLRLYGYLDGLVPAKVVPY------LDKLAPHS-ELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCEEEEeecCCcccCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 89999999999999999876655 56678888 9999999999999999999999999996
No 30
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.4e-29 Score=208.42 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=153.9
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHH-HHHHHHHhcCCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGD-VIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~l~G~ 158 (375)
+|+||++||++++...|..+++.|+ +||+|+++|+||+|.|+.+......++++.+++ +..+++.++.+ +++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE--PFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC--eEEEEEe
Confidence 4789999999999999999999998 689999999999999987654456788999999 77888888777 9999999
Q ss_pred ChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHhhc
Q 017221 159 DWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYR 238 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (375)
|+||.+++.++.++|+.|++++++++........... ..... .......+.......+...+....
T Consensus 78 S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 143 (251)
T TIGR03695 78 SMGGRIALYYALQYPERVQGLILESGSPGLATEEERA----ARRQN----------DEQLAQRFEQEGLEAFLDDWYQQP 143 (251)
T ss_pred ccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhh----hhhhc----------chhhhhHHHhcCccHHHHHHhcCc
Confidence 9999999999999999999999999765432211000 00000 000001111111111222111100
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCC
Q 017221 239 NPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDL 318 (375)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~ 318 (375)
... . ...+.......+...............+..............+.++++|+++++|++
T Consensus 144 ~~~----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 204 (251)
T TIGR03695 144 LFA----S---------------QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEK 204 (251)
T ss_pred eee----e---------------cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCc
Confidence 000 0 000111111111110000000000000000000000000001127899999999999
Q ss_pred CcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 319 DLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 319 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
|..++ +..+. +.+..++. ++++++++||++++++|+++++.|.+||+
T Consensus 205 D~~~~-~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 205 DEKFV-QIAKE------MQKLLPNL-TLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred chHHH-HHHHH------HHhcCCCC-cEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 98764 22222 56677888 99999999999999999999999999984
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=1.9e-28 Score=206.08 Aligned_cols=122 Identities=22% Similarity=0.352 Sum_probs=101.2
Q ss_pred EEEECCeEEEeeecC---CCCEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCc-cccHhHHHHH
Q 017221 64 VVNVNGINMHVAEKG---QGPLILFIHGFPLLWY-SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVP-SYTCLHLVGD 138 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g---~~~~il~~hG~~~~~~-~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~-~~~~~~~~~d 138 (375)
+++.++.++.|...+ ++++|||+||++++.. .|..+...+.+.||+|+++|+||+|.|..+.... .++.+++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 567778888887765 2689999999865554 4566666666668999999999999998654312 4789999999
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+.+++++++.+ +++++||||||.+++.++.++|++++++|++++...
T Consensus 86 ~~~~~~~~~~~--~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 86 LEEVREKLGLD--KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred HHHHHHHcCCC--cEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 99999999888 899999999999999999999999999999987553
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=7.9e-29 Score=214.52 Aligned_cols=106 Identities=21% Similarity=0.333 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCcccc----HhHHHHHHHHHHHHhcCCCCcEE
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYT----CLHLVGDVIALLDAVAADQEKVF 154 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~----~~~~~~d~~~~l~~l~~~~~~~~ 154 (375)
++|+|||+||++++...|...++.|.++ |+|+++|+||||.|+.+.. ...+ .+.+++++.++++.++.+ +++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~--~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDF-TCKSTEETEAWFIDSFEEWRKAKNLS--NFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHHHHcCCC--CeE
Confidence 4689999999999999998888999875 9999999999999986542 1111 224567788888888887 999
Q ss_pred EEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 155 VVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
++||||||.+++.+|.++|++|+++|+++|....
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 9999999999999999999999999999987654
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.2e-29 Score=217.60 Aligned_cols=122 Identities=24% Similarity=0.313 Sum_probs=100.3
Q ss_pred EEECCeEEEeeecCC-----CCEEEEEcCCCCChh-----------hHHHHH---HHHHhCCcEEEEeCCCC--CCCCCC
Q 017221 65 VNVNGINMHVAEKGQ-----GPLILFIHGFPLLWY-----------SWRHQI---TALASLGYRAVAPDLRG--YGDTDA 123 (375)
Q Consensus 65 ~~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~-----------~~~~~~---~~L~~~g~~v~~~d~~G--~G~S~~ 123 (375)
..++|.+++|...|+ +++|||+||++++.. .|..++ ..|...+|+|+++|+|| ||.|..
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 356899999999884 579999999999763 377775 25555679999999999 555532
Q ss_pred CC----------CCccccHhHHHHHHHHHHHHhcCCCCc-EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 124 PA----------EVPSYTCLHLVGDVIALLDAVAADQEK-VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 124 ~~----------~~~~~~~~~~~~d~~~~l~~l~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
.. +...++++++++|+.+++++++++ + ++++||||||++++.+|.++|++|+++|++++....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE--QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 11 012578999999999999999998 8 999999999999999999999999999999987643
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=3.2e-28 Score=211.87 Aligned_cols=247 Identities=25% Similarity=0.342 Sum_probs=165.0
Q ss_pred eeEEEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHH
Q 017221 62 HKVVNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
......++.+++|...|+ +|+|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...+++++++++
T Consensus 111 ~~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~ 187 (371)
T PRK14875 111 PRKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAV 187 (371)
T ss_pred CCcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 345677888999988774 689999999999999999999999875 999999999999996554 457899999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchH
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIE 219 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
.++++.++.+ +++++|||+||.+++.+|.++|+++.++|++++..............+.. ...+..
T Consensus 188 ~~~~~~~~~~--~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-- 253 (371)
T PRK14875 188 LAFLDALGIE--RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVA----------AESRRE-- 253 (371)
T ss_pred HHHHHhcCCc--cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhc----------ccchhH--
Confidence 9999999887 99999999999999999999999999999998764322111000000000 000000
Q ss_pred HHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHH------------HHhhhcCccceee
Q 017221 220 AEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYA------------SKYEKAGFTGGIN 287 (375)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 287 (375)
....+...+.. . ..+......... .......+...
T Consensus 254 -------~~~~~~~~~~~----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (371)
T PRK14875 254 -------LKPVLELLFAD----P--------------------ALVTRQMVEDLLKYKRLDGVDDALRALADALFAGG-- 300 (371)
T ss_pred -------HHHHHHHHhcC----h--------------------hhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCc--
Confidence 00011111000 0 000000000000 00000000000
Q ss_pred eeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHH
Q 017221 288 YYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKH 367 (375)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 367 (375)
....+.... +.++++|+++++|++|.++|++.... ..++. ++.+++++||++++++|+++++.
T Consensus 301 -~~~~~~~~~------l~~i~~Pvlii~g~~D~~vp~~~~~~---------l~~~~-~~~~~~~~gH~~~~e~p~~~~~~ 363 (371)
T PRK14875 301 -RQRVDLRDR------LASLAIPVLVIWGEQDRIIPAAHAQG---------LPDGV-AVHVLPGAGHMPQMEAAADVNRL 363 (371)
T ss_pred -ccchhHHHH------HhcCCCCEEEEEECCCCccCHHHHhh---------ccCCC-eEEEeCCCCCChhhhCHHHHHHH
Confidence 000000011 12789999999999999998765432 22356 89999999999999999999999
Q ss_pred HHHHHhhC
Q 017221 368 IYNFFQKF 375 (375)
Q Consensus 368 i~~fl~~~ 375 (375)
|.+||+++
T Consensus 364 i~~fl~~~ 371 (371)
T PRK14875 364 LAEFLGKA 371 (371)
T ss_pred HHHHhccC
Confidence 99999864
No 35
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=191.33 Aligned_cols=267 Identities=17% Similarity=0.195 Sum_probs=169.5
Q ss_pred eeEEEECCeEEEeeecCC------CCEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 62 HKVVNVNGINMHVAEKGQ------GPLILFIHGFPLLW-YSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~------~~~il~~hG~~~~~-~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
..+...+|.++++..+.+ ...|+++||+++.. ..|+.++..|+..||.|+++|++|||.|++... ...+++.
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~ 108 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDL 108 (313)
T ss_pred eeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHH
Confidence 456677899998776643 23799999999865 678889999999999999999999999996653 4568999
Q ss_pred HHHHHHHHHHHhcCC----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEE
Q 017221 135 LVGDVIALLDAVAAD----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYIC 210 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (375)
.++|+...++..... ..+..++||||||.+++.++.++|+..+|+|+++|.+..........-.
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v------------ 176 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV------------ 176 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH------------
Confidence 999999999875432 4589999999999999999999999999999999988754332111100
Q ss_pred eecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHH-HhhhcCccceeeee
Q 017221 211 RFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYAS-KYEKAGFTGGINYY 289 (375)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 289 (375)
..+...+....+.-...+........ .-..+....... ...-.+..+....+
T Consensus 177 ------------------~~~l~~l~~liP~wk~vp~~d~~~~~---------~kdp~~r~~~~~npl~y~g~pRl~T~~ 229 (313)
T KOG1455|consen 177 ------------------ISILTLLSKLIPTWKIVPTKDIIDVA---------FKDPEKRKILRSDPLCYTGKPRLKTAY 229 (313)
T ss_pred ------------------HHHHHHHHHhCCceeecCCccccccc---------cCCHHHHHHhhcCCceecCCccHHHHH
Confidence 00111111111110000000000000 000000000000 00000000000011
Q ss_pred eccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc----cChhHHH
Q 017221 290 RNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE----EKPDEVN 365 (375)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~ 365 (375)
.-+....++.... .++++|.+|+||++|.++.+..++.+++. ....+ |++.+|||.-|.+.. |+.+.+.
T Consensus 230 ElLr~~~~le~~l--~~vtvPflilHG~dD~VTDp~~Sk~Lye~----A~S~D-KTlKlYpGm~H~Ll~gE~~en~e~Vf 302 (313)
T KOG1455|consen 230 ELLRVTADLEKNL--NEVTVPFLILHGTDDKVTDPKVSKELYEK----ASSSD-KTLKLYPGMWHSLLSGEPDENVEIVF 302 (313)
T ss_pred HHHHHHHHHHHhc--ccccccEEEEecCCCcccCcHHHHHHHHh----ccCCC-CceeccccHHHHhhcCCCchhHHHHH
Confidence 1111111111111 18899999999999999999999887532 22233 599999999999864 3457888
Q ss_pred HHHHHHHhhC
Q 017221 366 KHIYNFFQKF 375 (375)
Q Consensus 366 ~~i~~fl~~~ 375 (375)
..|.+||+++
T Consensus 303 ~DI~~Wl~~r 312 (313)
T KOG1455|consen 303 GDIISWLDER 312 (313)
T ss_pred HHHHHHHHhc
Confidence 9999999874
No 36
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=5.1e-30 Score=207.84 Aligned_cols=102 Identities=42% Similarity=0.611 Sum_probs=93.9
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHH
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGA 162 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg 162 (375)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.+.....++++++++|+.++++.++.+ +++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK--KVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS--SEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc--ccccccccccc
Confidence 7999999999999999999995 68999999999999998766434688999999999999999997 99999999999
Q ss_pred HHHHHHHHhCCCccceEEEEccCCC
Q 017221 163 LIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 163 ~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
.+++.++.++|++|+++|+++|+..
T Consensus 78 ~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 78 MIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccceeeccccc
Confidence 9999999999999999999998875
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=4e-28 Score=200.36 Aligned_cols=272 Identities=20% Similarity=0.205 Sum_probs=174.3
Q ss_pred ceeEEEECCeEEEeeecCC----CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHH
Q 017221 61 QHKVVNVNGINMHVAEKGQ----GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLV 136 (375)
Q Consensus 61 ~~~~~~~~g~~l~~~~~g~----~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~ 136 (375)
+..+...+|..++|..+.. ..+||++||++.+..-|..++..|..+||.|+++|+||||.|.........++.++.
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 3567888999999988753 268999999999999999999999999999999999999999732222445699999
Q ss_pred HHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecC
Q 017221 137 GDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQE 214 (375)
Q Consensus 137 ~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (375)
+|+.++++.... ...+++++||||||.+++.++.+++..|+++|+.+|........ ......
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~-~~~~~~--------------- 154 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAI-LRLILA--------------- 154 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhH-HHHHHH---------------
Confidence 999999999875 25699999999999999999999999999999999988764300 000000
Q ss_pred CcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCC--HHHHHHHHHHhhhcCccceeeeeecc
Q 017221 215 PGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLS--EEDVKYYASKYEKAGFTGGINYYRNI 292 (375)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (375)
...........+...... .. .......+++ .+....+...-....-.....++...
T Consensus 155 --------------~~~~~~~~~~~p~~~~~~-~~-------~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~ 212 (298)
T COG2267 155 --------------RLALKLLGRIRPKLPVDS-NL-------LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLA 212 (298)
T ss_pred --------------HHhcccccccccccccCc-cc-------ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHH
Confidence 000000000000000000 00 0001111111 11222222111000000000111111
Q ss_pred ccchhhcccCcCCcccccEEEEecCCCcCCC-CCCchhhhhcCccccccCCceeEEEecCCCCCCCcc-Ch--hHHHHHH
Q 017221 293 ELNWELLAPWTGAQIKVPVKFIVGDLDLTYN-APGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEE-KP--DEVNKHI 368 (375)
Q Consensus 293 ~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p--~~~~~~i 368 (375)
..............+++|+|+++|++|.+++ .+...+++ -....++. ++++++|+.|..+.| .. +++.+.+
T Consensus 213 ~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~----~~~~~~~~-~~~~~~g~~He~~~E~~~~r~~~~~~~ 287 (298)
T COG2267 213 LLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFF----ERAGSPDK-ELKVIPGAYHELLNEPDRAREEVLKDI 287 (298)
T ss_pred HHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHH----HhcCCCCc-eEEecCCcchhhhcCcchHHHHHHHHH
Confidence 1111100011112789999999999999999 67777665 23445666 999999999999666 44 8899999
Q ss_pred HHHHhhC
Q 017221 369 YNFFQKF 375 (375)
Q Consensus 369 ~~fl~~~ 375 (375)
.+|+.++
T Consensus 288 ~~~l~~~ 294 (298)
T COG2267 288 LAWLAEA 294 (298)
T ss_pred HHHHHhh
Confidence 9999763
No 38
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=5.2e-29 Score=215.05 Aligned_cols=122 Identities=19% Similarity=0.282 Sum_probs=98.9
Q ss_pred EEECCeEEEeeecCC-----CCEEEEEcCCCCChhh-------------HHHHHH---HHHhCCcEEEEeCCCCC-CCCC
Q 017221 65 VNVNGINMHVAEKGQ-----GPLILFIHGFPLLWYS-------------WRHQIT---ALASLGYRAVAPDLRGY-GDTD 122 (375)
Q Consensus 65 ~~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~~-------------~~~~~~---~L~~~g~~v~~~d~~G~-G~S~ 122 (375)
.+++|.+++|...|+ +|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|+
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 345788899999874 5899999999999875 555552 34344699999999983 5454
Q ss_pred CCCC------------CccccHhHHHHHHHHHHHHhcCCCCc-EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 123 APAE------------VPSYTCLHLVGDVIALLDAVAADQEK-VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 123 ~~~~------------~~~~~~~~~~~d~~~~l~~l~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
.+.+ ...++++++++++.+++++++++ + ++++||||||.+++.+|.++|++|+++|++++....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT--RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC--CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 3211 12579999999999999999998 8 589999999999999999999999999999976643
No 39
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=8e-28 Score=206.31 Aligned_cols=258 Identities=17% Similarity=0.184 Sum_probs=156.9
Q ss_pred ECCeEEEeeecCC-----CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHH
Q 017221 67 VNGINMHVAEKGQ-----GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIA 141 (375)
Q Consensus 67 ~~g~~l~~~~~g~-----~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~ 141 (375)
.++..+++..+.+ .++|||+||++++...|..+++.|+++||+|+++|+||||.|+.... ...+.+++++|+.+
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~ 196 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEA 196 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHH
Confidence 3567777776543 36899999999999999999999999999999999999999987542 34578889999999
Q ss_pred HHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCC---ccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCc
Q 017221 142 LLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPD---RVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPG 216 (375)
Q Consensus 142 ~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (375)
+++.+..+ ..+++++||||||.+++.++. +|+ +++++|+.+|........ .....
T Consensus 197 ~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~-~~~~~------------------ 256 (395)
T PLN02652 197 FLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH-PIVGA------------------ 256 (395)
T ss_pred HHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-HHHHH------------------
Confidence 99998754 247999999999999998765 554 799999998865422110 00000
Q ss_pred chHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHH-HhhhcCccceeeeeeccccc
Q 017221 217 EIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYAS-KYEKAGFTGGINYYRNIELN 295 (375)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (375)
...+.....+......... ......-..+....... .....+.......+......
T Consensus 257 --------------~~~l~~~~~p~~~~~~~~~---------~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~ 313 (395)
T PLN02652 257 --------------VAPIFSLVAPRFQFKGANK---------RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS 313 (395)
T ss_pred --------------HHHHHHHhCCCCcccCccc---------ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH
Confidence 0000000000000000000 00000000011000000 00000000000000000000
Q ss_pred hhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCcc-ChhHHHHHHHHHHhh
Q 017221 296 WELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEE-KPDEVNKHIYNFFQK 374 (375)
Q Consensus 296 ~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 374 (375)
... ...+.++++|+|+++|++|.++|++.++++++. . ..++. +++++++++|.++.| .++++.+.|.+||++
T Consensus 314 ~~l--~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~--~--~~~~k-~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 314 SYL--TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNE--A--ASRHK-DIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred HHH--HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHh--c--CCCCc-eEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 000 011127899999999999999999888775321 1 12334 899999999998666 799999999999986
Q ss_pred C
Q 017221 375 F 375 (375)
Q Consensus 375 ~ 375 (375)
+
T Consensus 387 ~ 387 (395)
T PLN02652 387 R 387 (395)
T ss_pred H
Confidence 3
No 40
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=2.4e-28 Score=181.43 Aligned_cols=227 Identities=21% Similarity=0.230 Sum_probs=154.5
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhc-CCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVA-ADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~-~~~~~~~l~G~ 158 (375)
+.+|||+||+.|+..+.+.+.+.|.++||.|.+|.+||||..... .-..+.+++.+++.+..++|. ...+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~--fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED--FLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH--HhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 489999999999999999999999999999999999999977422 245688888888888888876 44569999999
Q ss_pred ChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHhhc
Q 017221 159 DWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYR 238 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (375)
||||.+++.+|.++| ++++|.++++....+.... . +.+++-+-...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~i-i-------------------------------e~~l~y~~~~k 138 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRII-I-------------------------------EGLLEYFRNAK 138 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhh-h-------------------------------HHHHHHHHHhh
Confidence 999999999999998 9999999988775432100 0 00111000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCC
Q 017221 239 NPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDL 318 (375)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~ 318 (375)
.....+.+........+..........++........ .+..|..|+++++|.+
T Consensus 139 ----------------------k~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~I~~pt~vvq~~~ 191 (243)
T COG1647 139 ----------------------KYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARR-----SLDKIYSPTLVVQGRQ 191 (243)
T ss_pred ----------------------hccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHh-----hhhhcccchhheeccc
Confidence 0001122222222222211111100000000000000 0118899999999999
Q ss_pred CcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCC-CccChhHHHHHHHHHHhh
Q 017221 319 DLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFI-NEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 319 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 374 (375)
|.++|.+.+.-.+ ....++.+++..++++||.. .-++.+++.+.+..||++
T Consensus 192 D~mv~~~sA~~Iy-----~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 192 DEMVPAESANFIY-----DHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCCHHHHHHHH-----HhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999998776543 34445556999999999998 556789999999999974
No 41
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=3e-28 Score=177.51 Aligned_cols=247 Identities=18% Similarity=0.231 Sum_probs=169.7
Q ss_pred cceeEEEECCeEEEeeecCCCC-EEEEEcCCCCC-hhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCC-CccccHhHH
Q 017221 60 IQHKVVNVNGINMHVAEKGQGP-LILFIHGFPLL-WYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAE-VPSYTCLHL 135 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~~~g~~~-~il~~hG~~~~-~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~-~~~~~~~~~ 135 (375)
.+...+.++|.+|+|..+|.+| .|++++|.-|+ ..+|.+.+..|.+. .+.|+++|.||+|.|..+.. ....-+...
T Consensus 21 ~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred hhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 3455788999999999999986 78889997654 45787777766553 48999999999999987762 122344556
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCC
Q 017221 136 VGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEP 215 (375)
Q Consensus 136 ~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (375)
+++..++++.++.+ ++.++|+|-||..|+..|+++++.|..+|+.++..............++..
T Consensus 101 a~~avdLM~aLk~~--~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv------------- 165 (277)
T KOG2984|consen 101 AEYAVDLMEALKLE--PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDV------------- 165 (277)
T ss_pred HHHHHHHHHHhCCC--CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHH-------------
Confidence 67777888899888 999999999999999999999999999999988766544332222222211
Q ss_pred cchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHH----HHHHHHhhhcCccceeeeeec
Q 017221 216 GEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDV----KYYASKYEKAGFTGGINYYRN 291 (375)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 291 (375)
.++.... +.........+.. ..+....++- +..
T Consensus 166 ----------------~kWs~r~-------------------R~P~e~~Yg~e~f~~~wa~wvD~v~qf--------~~~ 202 (277)
T KOG2984|consen 166 ----------------NKWSARG-------------------RQPYEDHYGPETFRTQWAAWVDVVDQF--------HSF 202 (277)
T ss_pred ----------------hhhhhhh-------------------cchHHHhcCHHHHHHHHHHHHHHHHHH--------hhc
Confidence 0010000 0000000111111 1111111110 000
Q ss_pred cccch-hhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHH
Q 017221 292 IELNW-ELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYN 370 (375)
Q Consensus 292 ~~~~~-~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 370 (375)
-+.+. +...+ +++||++|++|++|++++....- | +....+.+ ++.++|.++|.+++..+++|++.+.+
T Consensus 203 ~dG~fCr~~lp----~vkcPtli~hG~kDp~~~~~hv~-f-----i~~~~~~a-~~~~~peGkHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 203 CDGRFCRLVLP----QVKCPTLIMHGGKDPFCGDPHVC-F-----IPVLKSLA-KVEIHPEGKHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred CCCchHhhhcc----cccCCeeEeeCCcCCCCCCCCcc-c-----hhhhcccc-eEEEccCCCcceeeechHHHHHHHHH
Confidence 01111 11122 89999999999999999877653 2 66778888 99999999999999999999999999
Q ss_pred HHhhC
Q 017221 371 FFQKF 375 (375)
Q Consensus 371 fl~~~ 375 (375)
||++.
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 99874
No 42
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=4.2e-27 Score=233.39 Aligned_cols=112 Identities=29% Similarity=0.441 Sum_probs=97.8
Q ss_pred EEeeecCC---CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC------CccccHhHHHHHHHHH
Q 017221 72 MHVAEKGQ---GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE------VPSYTCLHLVGDVIAL 142 (375)
Q Consensus 72 l~~~~~g~---~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~------~~~~~~~~~~~d~~~~ 142 (375)
++|...|+ +|+|||+||++++...|..+++.|.+. |+|+++|+||||.|+.... ...++++++++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 44555564 689999999999999999999999875 9999999999999975431 1356899999999999
Q ss_pred HHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 143 LDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 143 l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
+++++.+ +++++||||||.+++.++.++|++|+++|++++..
T Consensus 1439 l~~l~~~--~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1439 IEHITPG--KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred HHHhCCC--CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 9999888 99999999999999999999999999999998754
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.95 E-value=7.3e-27 Score=196.81 Aligned_cols=120 Identities=23% Similarity=0.303 Sum_probs=100.0
Q ss_pred EEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHH
Q 017221 65 VNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIAL 142 (375)
Q Consensus 65 ~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~ 142 (375)
...+|.+++|...|+ +++|||+||++++...+ .....+...+|+|+++|+||||.|+.+.....++.+++++|+..+
T Consensus 10 ~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l 88 (306)
T TIGR01249 10 NVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKL 88 (306)
T ss_pred EcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 334688999999886 78999999988776543 344445456799999999999999865432356788999999999
Q ss_pred HHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 143 LDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 143 l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+++++.+ +++++||||||.+++.++.++|++|+++|++++...
T Consensus 89 ~~~l~~~--~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 89 REKLGIK--NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHcCCC--CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 9999888 999999999999999999999999999999987654
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=8.8e-27 Score=215.10 Aligned_cols=120 Identities=33% Similarity=0.611 Sum_probs=100.9
Q ss_pred eeEEEECCeEEEeeecCC--CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHH
Q 017221 62 HKVVNVNGINMHVAEKGQ--GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~--~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
..+++.+|.+++|...|+ +|+|||+||++++...|.++++.|. .||+|+++|+||||.|+.+.....++.+++++|+
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 456788999999998885 7899999999999999999999994 5799999999999999876543568999999999
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC--CCccceEEEEc
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFR--PDRVKALVNLS 183 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~lil~~ 183 (375)
.++++.++.+ ++++++||||||.+++.++.+. ++++..++.++
T Consensus 84 ~~~i~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 84 AAVIDAVSPD-RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHhCCC-CcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999875 2499999999999999888762 34455555444
No 45
>PLN02511 hydrolase
Probab=99.95 E-value=2e-26 Score=198.84 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=148.5
Q ss_pred CCCEEEEEcCCCCChhh-H-HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEE
Q 017221 79 QGPLILFIHGFPLLWYS-W-RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVF 154 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~-~-~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~ 154 (375)
.+|+||++||+++++.. | ..++..+.++||+|+++|+||||.|.... ........++|+.+++++++.. ..+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 36899999999876643 4 56777777889999999999999997643 2333457788999999988763 24899
Q ss_pred EEEeChHHHHHHHHHHhCCCc--cceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHH
Q 017221 155 VVGHDWGALIAWYLCLFRPDR--VKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLK 232 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
++||||||.+++.++.++|++ |.++++++++...... ...+... +. ......+... ......
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~----~~~~~~~---------~~--~~y~~~~~~~-l~~~~~ 240 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA----DEDFHKG---------FN--NVYDKALAKA-LRKIFA 240 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH----HHHHhcc---------HH--HHHHHHHHHH-HHHHHH
Confidence 999999999999999999987 8898888765532100 0000000 00 0000000000 011111
Q ss_pred H---HHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhh--cCccceeeeeeccccchhhcccCcCCcc
Q 017221 233 E---FLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEK--AGFTGGINYYRNIELNWELLAPWTGAQI 307 (375)
Q Consensus 233 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (375)
. .+... .... .. .. .... ..+..+.+.+.. .++.....+|...+... .+.++
T Consensus 241 ~~~~~~~~~-~~~~-----------~~-~~-~~~~---~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~------~L~~I 297 (388)
T PLN02511 241 KHALLFEGL-GGEY-----------NI-PL-VANA---KTVRDFDDGLTRVSFGFKSVDAYYSNSSSSD------SIKHV 297 (388)
T ss_pred HHHHHHhhC-CCcc-----------CH-HH-HHhC---CCHHHHHHhhhhhcCCCCCHHHHHHHcCchh------hhccC
Confidence 0 00000 0000 00 00 0000 001111111111 11211112222212111 12389
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhH------HHHHHHHHHhh
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDE------VNKHIYNFFQK 374 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~------~~~~i~~fl~~ 374 (375)
++|+|+|+|++|+++|....... ..+..+++ ++++++++||+.++|+|+. +.+.+.+||+.
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~-----~~~~~p~~-~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPRE-----DIKANPNC-LLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHh-----HHhcCCCE-EEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 99999999999999998754221 44567888 9999999999999999976 47899999864
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=2.5e-25 Score=177.37 Aligned_cols=258 Identities=20% Similarity=0.260 Sum_probs=171.8
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC--CCCcEEE
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA--DQEKVFV 155 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~~~~l 155 (375)
+.|+++++||.-|+.+.|+.+...|+.. |-.|+++|.|.||.|.... .++...+++|+..+++..+. ...++++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4799999999999999999999999876 7899999999999997765 56799999999999999863 2348999
Q ss_pred EEeChHH-HHHHHHHHhCCCccceEEEEccCCC-CCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHH
Q 017221 156 VGHDWGA-LIAWYLCLFRPDRVKALVNLSVVFN-PRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKE 233 (375)
Q Consensus 156 ~G~S~Gg-~~a~~~a~~~p~~v~~lil~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (375)
+|||||| .+++..+...|+.+..+|.++-++. .........+.+..+.....-...-..+....+.+........+..
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 8888888889999999999985553 2222223333333321111111111222233344444444444444
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEE
Q 017221 234 FLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKF 313 (375)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li 313 (375)
++...... ...... ..-......+..........++.. ++.. .....||++
T Consensus 208 fi~~nl~~-~~~~~s------------~~w~~nl~~i~~~~~~~~~~s~~~------------~l~~----~~~~~pvlf 258 (315)
T KOG2382|consen 208 FILTNLKK-SPSDGS------------FLWRVNLDSIASLLDEYEILSYWA------------DLED----GPYTGPVLF 258 (315)
T ss_pred HHHHhcCc-CCCCCc------------eEEEeCHHHHHHHHHHHHhhcccc------------cccc----cccccceeE
Confidence 43332211 000000 000112222322222211111100 0000 166899999
Q ss_pred EecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhhC
Q 017221 314 IVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 314 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 375 (375)
+.|.++..++.+...+ +.+.+|++ +++.++++||+.++|+|+++.+.|.+|+.++
T Consensus 259 i~g~~S~fv~~~~~~~------~~~~fp~~-e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 259 IKGLQSKFVPDEHYPR------MEKIFPNV-EVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred EecCCCCCcChhHHHH------HHHhccch-heeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999887665 77889998 9999999999999999999999999999763
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=3.4e-25 Score=187.55 Aligned_cols=122 Identities=22% Similarity=0.325 Sum_probs=96.4
Q ss_pred EECCeEEEeeecC---CCCEEEEEcCCCCChh-hH-------------------------HHHHHHHHhCCcEEEEeCCC
Q 017221 66 NVNGINMHVAEKG---QGPLILFIHGFPLLWY-SW-------------------------RHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 66 ~~~g~~l~~~~~g---~~~~il~~hG~~~~~~-~~-------------------------~~~~~~L~~~g~~v~~~d~~ 116 (375)
..+|.+|++..+. ++.+|+++||++++.. .+ ..+++.|.++||.|+++|+|
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 3478888877664 3569999999998875 21 45789999999999999999
Q ss_pred CCCCCCCCCCC--ccccHhHHHHHHHHHHHHhcC---------------------C-CCcEEEEEeChHHHHHHHHHHhC
Q 017221 117 GYGDTDAPAEV--PSYTCLHLVGDVIALLDAVAA---------------------D-QEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 117 G~G~S~~~~~~--~~~~~~~~~~d~~~~l~~l~~---------------------~-~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
|||.|+..... ...+++++++|+.++++.+.. . ..+++++||||||.+++.++.++
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 99999864321 124889999999999987642 1 34799999999999999999765
Q ss_pred CC--------ccceEEEEccCCC
Q 017221 173 PD--------RVKALVNLSVVFN 187 (375)
Q Consensus 173 p~--------~v~~lil~~~~~~ 187 (375)
++ .++|+|+++|...
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccccccccccccceEEEeccceE
Confidence 42 5899999998764
No 48
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=2.2e-25 Score=190.50 Aligned_cols=284 Identities=15% Similarity=0.134 Sum_probs=164.7
Q ss_pred EECCeEEEeeecCC-----CCEEEEEcCCCCChh-------------hHHHHHH---HHHhCCcEEEEeCCCCCCCCCCC
Q 017221 66 NVNGINMHVAEKGQ-----GPLILFIHGFPLLWY-------------SWRHQIT---ALASLGYRAVAPDLRGYGDTDAP 124 (375)
Q Consensus 66 ~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~-------------~~~~~~~---~L~~~g~~v~~~d~~G~G~S~~~ 124 (375)
++...+|.|+.+|+ .++||++|++.+++. .|..++- .|....|.|+++|..|.|.|+.|
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 34678899999986 479999999988642 3665553 34444599999999998764322
Q ss_pred -----------C--------CCccccHhHHHHHHHHHHHHhcCCCCcEE-EEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 125 -----------A--------EVPSYTCLHLVGDVIALLDAVAADQEKVF-VVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 125 -----------~--------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
+ +++.+++.++++++.+++++++++ +++ ++||||||++++.+|.++|++|+++|++++
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~--~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA--RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 1 234579999999999999999998 886 999999999999999999999999999987
Q ss_pred CCCCCCCC-CchhhhHHhh------cCCceEEEeecCCcchHHHH-----HhcCcHHHHHHHHhhcCCCCCCCCCCCCCC
Q 017221 185 VFNPRNPN-MKPLQVFKAV------YGDDYYICRFQEPGEIEAEF-----AQMGTETVLKEFLTYRNPGPLFLPKGKGFG 252 (375)
Q Consensus 185 ~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (375)
........ ....+..+.. +..+.|.. ...|....... ........+..-+..... . .
T Consensus 195 ~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~-~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~---~-~------ 263 (389)
T PRK06765 195 NPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYG-EEQPMKGLTLALRMMTMNAFDEHFYETTFPRNAS---I-E------ 263 (389)
T ss_pred CCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCC-CCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcc---c-c------
Confidence 65533221 1111111111 11111110 00110000000 001111111111110000 0 0
Q ss_pred CCCCCcccCCCCCCHHHHHHHHHHhh--------hcCccceeeeeeccccchhh-cccCcCCcccccEEEEecCCCcCCC
Q 017221 253 HPPDAQIALPSWLSEEDVKYYASKYE--------KAGFTGGINYYRNIELNWEL-LAPWTGAQIKVPVKFIVGDLDLTYN 323 (375)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~lii~g~~D~~~~ 323 (375)
............++.|..... ...+......+...+..... .....+.++++|+++|+|++|.++|
T Consensus 264 -----~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 264 -----VDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred -----ccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 000000011112223222211 11111111111111110000 0011123789999999999999999
Q ss_pred CCCchhhhhcCccccccC----CceeEEEecC-CCCCCCccChhHHHHHHHHHHhh
Q 017221 324 APGTKDYINKGGFKKAVP----LLEEVIVMEG-VGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
++..++ +.+.++ ++ +++++++ +||+.++|+|+++.+.|.+||++
T Consensus 339 ~~~~~~------la~~lp~~~~~a-~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 339 PRYNYK------MVDILQKQGKYA-EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHH------HHHHhhhcCCCe-EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 877665 344443 66 9999985 89999999999999999999974
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=1.7e-23 Score=181.33 Aligned_cols=218 Identities=18% Similarity=0.133 Sum_probs=139.2
Q ss_pred CCCEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhc-CCCCcEEEE
Q 017221 79 QGPLILFIHGFPLLW-YSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVA-ADQEKVFVV 156 (375)
Q Consensus 79 ~~~~il~~hG~~~~~-~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~-~~~~~~~l~ 156 (375)
+.|+||++||+++.. +.|..+++.|+++||.|+++|+||+|.|.... ...+......++.+.+.... ++.+++.++
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~ 270 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAF 270 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEE
Confidence 357777777777654 56888889999999999999999999996543 12233344445555554442 244599999
Q ss_pred EeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHh
Q 017221 157 GHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLT 236 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (375)
||||||.+++++|..+|++|+++|+++|+....... .... .. ........+.
T Consensus 271 G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~---~~~~-----------------------~~--~p~~~~~~la 322 (414)
T PRK05077 271 GFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD---PKRQ-----------------------QQ--VPEMYLDVLA 322 (414)
T ss_pred EEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc---hhhh-----------------------hh--chHHHHHHHH
Confidence 999999999999999999999999999876421100 0000 00 0000111111
Q ss_pred hcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEec
Q 017221 237 YRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVG 316 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g 316 (375)
..... .....+.+......+. ... . .... .++++|+|+++|
T Consensus 323 ~~lg~---------------------~~~~~~~l~~~l~~~s---l~~----------~-~~l~----~~i~~PvLiI~G 363 (414)
T PRK05077 323 SRLGM---------------------HDASDEALRVELNRYS---LKV----------Q-GLLG----RRCPTPMLSGYW 363 (414)
T ss_pred HHhCC---------------------CCCChHHHHHHhhhcc---chh----------h-hhhc----cCCCCcEEEEec
Confidence 10000 0011111111111110 000 0 0000 178999999999
Q ss_pred CCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhhC
Q 017221 317 DLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 317 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 375 (375)
++|.++|++..+. +.+..++. +++++|++ ++.+.++++.+.|.+||+++
T Consensus 364 ~~D~ivP~~~a~~------l~~~~~~~-~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSRL------IASSSADG-KLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHHH------HHHhCCCC-eEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999988775 56677888 99999985 55679999999999999864
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.92 E-value=5.2e-24 Score=180.48 Aligned_cols=246 Identities=18% Similarity=0.153 Sum_probs=137.0
Q ss_pred CCEEEEEcCCCCChhh--HHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC--CCCcEEE
Q 017221 80 GPLILFIHGFPLLWYS--WRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA--DQEKVFV 155 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~--~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~~~~l 155 (375)
+|+||++||++++... +..+++.|.++||+|+++|+||||.+..... ..+. ....+|+..+++.+.. ...++++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~-~~~~~D~~~~i~~l~~~~~~~~~~~ 135 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYH-SGETEDARFFLRWLQREFGHVPTAA 135 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceEC-CCchHHHHHHHHHHHHhCCCCCEEE
Confidence 6899999999876443 4668899999999999999999997753221 1111 1224555554444431 1238999
Q ss_pred EEeChHHHHHHHHHHhCCCc--cceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHH---
Q 017221 156 VGHDWGALIAWYLCLFRPDR--VKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETV--- 230 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 230 (375)
+||||||.+++.++.++++. +.++|+++++....... ..+... ....+.......+
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~----~~~~~~---------------~~~~~~~~l~~~l~~~ 196 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS----YRMEQG---------------FSRVYQRYLLNLLKAN 196 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH----HHHhhh---------------HHHHHHHHHHHHHHHH
Confidence 99999999998888887654 89999999876532110 000000 0000000000000
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhh--cCccceeeeeeccccchhhcccCcCCccc
Q 017221 231 LKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEK--AGFTGGINYYRNIELNWELLAPWTGAQIK 308 (375)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (375)
+........ +.. ... .... .....+..+.+.+.. .++.....+|...+....+ .+++
T Consensus 197 ~~~~~~~~~-~~~--~~~---------~~~~---~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l------~~i~ 255 (324)
T PRK10985 197 AARKLAAYP-GTL--PIN---------LAQL---KSVRRLREFDDLITARIHGFADAIDYYRQCSALPLL------NQIR 255 (324)
T ss_pred HHHHHHhcc-ccc--cCC---------HHHH---hcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHH------hCCC
Confidence 111111100 000 000 0000 000011112111111 1333333333333322112 2889
Q ss_pred ccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccCh-----hHHHHHHHHHHhh
Q 017221 309 VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKP-----DEVNKHIYNFFQK 374 (375)
Q Consensus 309 ~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~ 374 (375)
+|+++|+|++|.+++++.... +.+..++. ++++++++||+.++|.. ...-+.+.+|++.
T Consensus 256 ~P~lii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHEVIPK------PESLPPNV-EYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CCEEEEecCCCCCCChhhChH------HHHhCCCe-EEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 999999999999998876654 44566787 99999999999988742 2444666777653
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=6.6e-23 Score=165.79 Aligned_cols=122 Identities=17% Similarity=0.141 Sum_probs=93.6
Q ss_pred eEEEECCeEEEeeecC-------CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCC-CCCCCCCCCccccHhH
Q 017221 63 KVVNVNGINMHVAEKG-------QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGY-GDTDAPAEVPSYTCLH 134 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g-------~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~-G~S~~~~~~~~~~~~~ 134 (375)
..-..+|.+|+-+..- +.++||++||++++...+..+++.|.++||.|+.+|+||+ |.|+..- ...+...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~ 90 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSI 90 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccc
Confidence 3445578888743322 2479999999999887899999999999999999999988 9996543 3344444
Q ss_pred HHHHHHHHHHHhcCC-CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 135 LVGDVIALLDAVAAD-QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
...|+..+++.+... .+++.|+||||||.+|+..|... .++++|+.+|....
T Consensus 91 g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l 143 (307)
T PRK13604 91 GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL 143 (307)
T ss_pred cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH
Confidence 577887777777532 34899999999999997777643 39999999987753
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=3.1e-22 Score=165.32 Aligned_cols=103 Identities=22% Similarity=0.201 Sum_probs=82.2
Q ss_pred CCEEEEEcCCC----CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC---CCc
Q 017221 80 GPLILFIHGFP----LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD---QEK 152 (375)
Q Consensus 80 ~~~il~~hG~~----~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~ 152 (375)
++.+|++||++ ++...|..+++.|+++||+|+++|+||||.|.... .+++++.+|+.++++.+... .++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 56788888765 34445677889999999999999999999987432 46677888888888887421 237
Q ss_pred EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
++++|||+||.+++.++.. +++|+++|+++|...
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 9999999999999999875 468999999998754
No 53
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=2.7e-23 Score=177.57 Aligned_cols=304 Identities=15% Similarity=0.175 Sum_probs=171.7
Q ss_pred ccccee-EEEECCeEEEeeec---------CCCCEEEEEcCCCCChhhHH------HHHHHHHhCCcEEEEeCCCCCCCC
Q 017221 58 EDIQHK-VVNVNGINMHVAEK---------GQGPLILFIHGFPLLWYSWR------HQITALASLGYRAVAPDLRGYGDT 121 (375)
Q Consensus 58 ~~~~~~-~~~~~g~~l~~~~~---------g~~~~il~~hG~~~~~~~~~------~~~~~L~~~g~~v~~~d~~G~G~S 121 (375)
.+.+.+ ..+.||..|..... .++|+|+++||+++++..|. .++..|+++||+|+++|+||+|.|
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s 121 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWS 121 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccc
Confidence 333444 45678998875542 12579999999998888873 355678899999999999998866
Q ss_pred CC-------CCCCccccHhHHH-HHHHHHHHHhcC-CCCcEEEEEeChHHHHHHHHHHhCCC---ccceEEEEccCCCCC
Q 017221 122 DA-------PAEVPSYTCLHLV-GDVIALLDAVAA-DQEKVFVVGHDWGALIAWYLCLFRPD---RVKALVNLSVVFNPR 189 (375)
Q Consensus 122 ~~-------~~~~~~~~~~~~~-~d~~~~l~~l~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~ 189 (375)
.. ......+++++++ .|+.++++++.. ..++++++|||+||.+++.++ .+|+ +|+++++++|.....
T Consensus 122 ~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~ 200 (395)
T PLN02872 122 YGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLD 200 (395)
T ss_pred cCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhc
Confidence 32 1111246888888 799999998732 234999999999999998555 5676 688999999887653
Q ss_pred CCCCchhhhHHh--------hcCCceEEEeecCCcchHHHHHhcC-cHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCccc
Q 017221 190 NPNMKPLQVFKA--------VYGDDYYICRFQEPGEIEAEFAQMG-TETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIA 260 (375)
Q Consensus 190 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (375)
.........+.. .++...+. .............- ........+..........+...+... ...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~----~~~ 273 (395)
T PLN02872 201 HVTAPLVLRMVFMHLDQMVVAMGIHQLN---FRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYY----LEY 273 (395)
T ss_pred cCCCHHHHHHHHHhHHHHHHHhcCceec---CCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHH----Hhc
Confidence 322222111111 11111110 00000000000000 000011111111100001111111111 111
Q ss_pred CCCCCCHHHHHHHHHHhhhcCccceeee-eeccc-cchhhcccCcCCcc--cccEEEEecCCCcCCCCCCchhhhhcCcc
Q 017221 261 LPSWLSEEDVKYYASKYEKAGFTGGINY-YRNIE-LNWELLAPWTGAQI--KVPVKFIVGDLDLTYNAPGTKDYINKGGF 336 (375)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 336 (375)
.+...+-..+..+.+......+.....- ..... ..........++++ ++|+++++|++|.+++++...+ +
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~------l 347 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH------T 347 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH------H
Confidence 2334455566666655443322211000 00000 00001112233466 6899999999999999877665 4
Q ss_pred ccccCCceeEEEecCCCCC---CCccChhHHHHHHHHHHhhC
Q 017221 337 KKAVPLLEEVIVMEGVGHF---INEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 337 ~~~~~~~~~~~~~~~~gH~---~~~e~p~~~~~~i~~fl~~~ 375 (375)
.+..++..+++.++++||. ...+.|+++.+.|.+|++++
T Consensus 348 ~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 348 LAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 4555653388899999996 45588999999999999863
No 54
>PRK10566 esterase; Provisional
Probab=99.90 E-value=5.3e-22 Score=162.81 Aligned_cols=101 Identities=24% Similarity=0.294 Sum_probs=74.1
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccc-----cHhHHHHHHHHHHHHhc----CCC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSY-----TCLHLVGDVIALLDAVA----ADQ 150 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~-----~~~~~~~d~~~~l~~l~----~~~ 150 (375)
.|+||++||++++...|..++..|+++||.|+++|+||||.+......... ...+..+|+.++++.+. ++.
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLD 106 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 589999999999998999999999999999999999999986432210111 11123344444454432 345
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCccceEEE
Q 017221 151 EKVFVVGHDWGALIAWYLCLFRPDRVKALVN 181 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil 181 (375)
++++++|||+||.+++.++.++|+ +.+.+.
T Consensus 107 ~~i~v~G~S~Gg~~al~~~~~~~~-~~~~~~ 136 (249)
T PRK10566 107 DRLAVGGASMGGMTALGIMARHPW-VKCVAS 136 (249)
T ss_pred cceeEEeecccHHHHHHHHHhCCC-eeEEEE
Confidence 699999999999999999999886 444433
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=1e-21 Score=152.20 Aligned_cols=184 Identities=17% Similarity=0.141 Sum_probs=124.7
Q ss_pred CEEEEEcCCCCChhhHHH--HHHHHHhC--CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 81 PLILFIHGFPLLWYSWRH--QITALASL--GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~--~~~~L~~~--g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
|+||++||++++...|.. +.+.+.+. +|+|+++|+||+| ++.++++.++++.++.+ +++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~--~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGD--PLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCC--CeEEE
Confidence 689999999999999874 44566552 6999999999874 35788999999998888 99999
Q ss_pred EeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHh
Q 017221 157 GHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLT 236 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (375)
||||||.+++.+|.++|. .+|+++|+..+. ..+..+..
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~---------------------------------------~~~~~~~~ 104 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRPF---------------------------------------ELLTDYLG 104 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCHH---------------------------------------HHHHHhcC
Confidence 999999999999999983 468888865421 01111111
Q ss_pred hcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEec
Q 017221 237 YRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVG 316 (375)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g 316 (375)
... ... ......++.+.+..... .. .. .+ ...+|+++++|
T Consensus 105 ~~~-~~~---------------~~~~~~~~~~~~~d~~~----~~----------------~~---~i-~~~~~v~iihg 144 (190)
T PRK11071 105 ENE-NPY---------------TGQQYVLESRHIYDLKV----MQ----------------ID---PL-ESPDLIWLLQQ 144 (190)
T ss_pred Ccc-ccc---------------CCCcEEEcHHHHHHHHh----cC----------------Cc---cC-CChhhEEEEEe
Confidence 000 000 00000011121111110 00 00 00 46788999999
Q ss_pred CCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 317 DLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 317 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
++|.++|.+.+.+.+ + +. ++++++|++|.+ +..++..+.+.+|++
T Consensus 145 ~~De~V~~~~a~~~~------~---~~-~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 145 TGDEVLDYRQAVAYY------A---AC-RQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCCCcCCHHHHHHHH------H---hc-ceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999998887643 2 34 677889999998 445889999999985
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=2.5e-21 Score=166.09 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=88.4
Q ss_pred EEEECCeEEEeeecC----CCCEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 64 VVNVNGINMHVAEKG----QGPLILFIHGFPLLWYSW-----RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g----~~~~il~~hG~~~~~~~~-----~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
..+.++..++..... .+++||++||...+...+ +.+++.|.++||+|+++|++|+|.|+.. .++++
T Consensus 42 v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d 116 (350)
T TIGR01836 42 VYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDD 116 (350)
T ss_pred EEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHH
Confidence 344456666543321 245799999986555443 5799999999999999999999987543 34555
Q ss_pred HHHH-HHHHH----HHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 135 LVGD-VIALL----DAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 135 ~~~d-~~~~l----~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
++.+ +.+.+ +..+.+ +++++||||||.+++.+++.+|++|+++|+++++....
T Consensus 117 ~~~~~~~~~v~~l~~~~~~~--~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 117 YINGYIDKCVDYICRTSKLD--QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHHHHhCCC--cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 5432 44444 444555 99999999999999999999999999999999887643
No 57
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.88 E-value=3.6e-22 Score=153.67 Aligned_cols=122 Identities=27% Similarity=0.409 Sum_probs=97.6
Q ss_pred eeEEEECCeE--EEe-eecC---CCCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhH
Q 017221 62 HKVVNVNGIN--MHV-AEKG---QGPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLH 134 (375)
Q Consensus 62 ~~~~~~~g~~--l~~-~~~g---~~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~ 134 (375)
.+.++++|.. ++. .... .+|.++++||+|.+...|..++.+|... ..+|+++|+||||.+...+. ...+.+.
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT 128 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLET 128 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHH
Confidence 3445555554 332 2222 4899999999999999999999998765 46788999999999977654 5689999
Q ss_pred HHHHHHHHHHHhcCC-CCcEEEEEeChHHHHHHHHHHhC--CCccceEEEEccC
Q 017221 135 LVGDVIALLDAVAAD-QEKVFVVGHDWGALIAWYLCLFR--PDRVKALVNLSVV 185 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~-~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~lil~~~~ 185 (375)
++.|+.++++.+-.+ ..+++|+||||||.+|.+.|... |. +.|++.++..
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999998643 55899999999999998888663 55 8899988864
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.88 E-value=8.8e-22 Score=172.82 Aligned_cols=270 Identities=12% Similarity=0.096 Sum_probs=157.5
Q ss_pred EECCeEE-EeeecCC---CCEEEEEcCCCCChhhHH-----HHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHH
Q 017221 66 NVNGINM-HVAEKGQ---GPLILFIHGFPLLWYSWR-----HQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLV 136 (375)
Q Consensus 66 ~~~g~~l-~~~~~g~---~~~il~~hG~~~~~~~~~-----~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~ 136 (375)
+.+-.++ +|....+ +++||++||+......|+ .+++.|.++||+|+++|++|+|.|........+..+.+.
T Consensus 170 ~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~ 249 (532)
T TIGR01838 170 ENELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVI 249 (532)
T ss_pred ECCcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHH
Confidence 3344443 4544432 589999999988777774 699999999999999999999988665433445555666
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChHHHHHH----HHHHhC-CCccceEEEEccCCCCCCCCCc-------hhhhHHhhcC
Q 017221 137 GDVIALLDAVAADQEKVFVVGHDWGALIAW----YLCLFR-PDRVKALVNLSVVFNPRNPNMK-------PLQVFKAVYG 204 (375)
Q Consensus 137 ~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~-------~~~~~~~~~~ 204 (375)
+.+..+.+.++.+ +++++||||||.++. .+++.+ |++|+++++++++......... ....+.....
T Consensus 250 ~al~~v~~~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~ 327 (532)
T TIGR01838 250 AALEVVEAITGEK--QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNG 327 (532)
T ss_pred HHHHHHHHhcCCC--CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHH
Confidence 6777777777777 999999999999852 345555 7889999999988764432110 0001111110
Q ss_pred CceEEEeecCCc-chHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCc
Q 017221 205 DDYYICRFQEPG-EIEAEFAQMGTETVL-KEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGF 282 (375)
Q Consensus 205 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (375)
... ..++ .....+........+ ..+......+..... ..+..+ ......+.......+.+.+-..+.
T Consensus 328 ~~G-----~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~-fdll~W-----n~D~t~lP~~~~~~~lr~ly~~N~ 396 (532)
T TIGR01838 328 GGG-----YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVP-FDLLFW-----NSDSTNLPGKMHNFYLRNLYLQNA 396 (532)
T ss_pred hcC-----CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccc-hhHHHH-----hccCccchHHHHHHHHHHHHhcCC
Confidence 000 0010 111122222222221 111111101100000 000000 011223445555555554444333
Q ss_pred cceeeeeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChh
Q 017221 283 TGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPD 362 (375)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 362 (375)
... ..+...+... .+.++++|++++.|++|.++|++.... +.+.+++. +..+++++||.+++++|.
T Consensus 397 L~~-G~~~v~g~~~------dL~~I~vPvLvV~G~~D~IvP~~sa~~------l~~~i~~~-~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 397 LTT-GGLEVCGVRL------DLSKVKVPVYIIATREDHIAPWQSAYR------GAALLGGP-KTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CcC-CeeEECCEec------chhhCCCCEEEEeeCCCCcCCHHHHHH------HHHHCCCC-EEEEECCCCCchHhhCCC
Confidence 221 1122222222 233899999999999999999887765 55667787 888999999999988774
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=2.6e-21 Score=144.99 Aligned_cols=93 Identities=32% Similarity=0.464 Sum_probs=75.0
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChH
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWG 161 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~G 161 (375)
+||++||++++...|..+++.|+++||.|+.+|+||+|.+... ....++.+++. ....+.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR----AGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH----HHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH----hhcCCCCcEEEEEEccC
Confidence 6899999999999999999999999999999999999987221 12222222222 21224459999999999
Q ss_pred HHHHHHHHHhCCCccceEEEEcc
Q 017221 162 ALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 162 g~~a~~~a~~~p~~v~~lil~~~ 184 (375)
|.+++.++.+. .+++++|++++
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESE
T ss_pred cHHHHHHhhhc-cceeEEEEecC
Confidence 99999999998 68999999998
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=3.2e-22 Score=162.46 Aligned_cols=76 Identities=34% Similarity=0.548 Sum_probs=70.6
Q ss_pred cEEEEeCCCCCCCCCC--CCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccC
Q 017221 108 YRAVAPDLRGYGDTDA--PAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVV 185 (375)
Q Consensus 108 ~~v~~~d~~G~G~S~~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 185 (375)
|+|+++|+||+|.|+. ......++.+++++++..+++.++.+ +++++||||||.+++.+++.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999994 14447889999999999999999999 8999999999999999999999999999999986
No 61
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=7.3e-20 Score=146.86 Aligned_cols=180 Identities=14% Similarity=0.110 Sum_probs=121.2
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC---------Ccccc---HhHHHHHHHHHH---
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE---------VPSYT---CLHLVGDVIALL--- 143 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~---------~~~~~---~~~~~~d~~~~l--- 143 (375)
+.|+||++||+|++...|..+++.|...++.+..++.+|...+..... ..... ..+..+.+.+.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999987765556666666532211100 00111 122222233333
Q ss_pred -HHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHH
Q 017221 144 -DAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEF 222 (375)
Q Consensus 144 -~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
+..+++.++++++|||+||.+++.++.++|+.+.+++.+++.... .+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-~~------------------------------- 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-LP------------------------------- 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-cc-------------------------------
Confidence 333455568999999999999999999999888888877653210 00
Q ss_pred HhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccC
Q 017221 223 AQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPW 302 (375)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (375)
..
T Consensus 143 --------------------------------------------~~---------------------------------- 144 (232)
T PRK11460 143 --------------------------------------------ET---------------------------------- 144 (232)
T ss_pred --------------------------------------------cc----------------------------------
Confidence 00
Q ss_pred cCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 303 TGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 303 ~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
...+.|+++++|++|.++|.+...+..+. +.+...+. ++++++++||.+..+..+.+.+.+.++|.
T Consensus 145 --~~~~~pvli~hG~~D~vvp~~~~~~~~~~--L~~~g~~~-~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 145 --APTATTIHLIHGGEDPVIDVAHAVAAQEA--LISLGGDV-TLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred --ccCCCcEEEEecCCCCccCHHHHHHHHHH--HHHCCCCe-EEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 03467999999999999999888765432 44444455 88999999999976666666666666553
No 62
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.85 E-value=1.5e-20 Score=139.24 Aligned_cols=215 Identities=16% Similarity=0.164 Sum_probs=143.9
Q ss_pred eEEEECCeEEE-eeec--CCCCEEEEEcCCCCChhhHHHHHHHHHh-CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHH
Q 017221 63 KVVNVNGINMH-VAEK--GQGPLILFIHGFPLLWYSWRHQITALAS-LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGD 138 (375)
Q Consensus 63 ~~~~~~g~~l~-~~~~--g~~~~il~~hG~~~~~~~~~~~~~~L~~-~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d 138 (375)
+..+.|.++++ |... .+.|+++++||..|+....-+.+.-+-. -+.+|+.+++||+|.|.+.+. .+.+.-|
T Consensus 58 ~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-----E~GL~lD 132 (300)
T KOG4391|consen 58 ELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-----EEGLKLD 132 (300)
T ss_pred EEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc-----ccceecc
Confidence 34455677775 3333 3589999999999998877776665543 479999999999999988763 3344456
Q ss_pred HHHHHHHhc----CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecC
Q 017221 139 VIALLDAVA----ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQE 214 (375)
Q Consensus 139 ~~~~l~~l~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (375)
.+++++++- .++.++++.|.|.||.+|..+|++..+++.++|+-++........
T Consensus 133 s~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~---------------------- 190 (300)
T KOG4391|consen 133 SEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA---------------------- 190 (300)
T ss_pred HHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhh----------------------
Confidence 666676664 335699999999999999999999999999999998776531100
Q ss_pred CcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeecccc
Q 017221 215 PGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIEL 294 (375)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (375)
-..+-... ...+..+ .+.+.+...+.
T Consensus 191 ----i~~v~p~~-~k~i~~l-------------------------------------c~kn~~~S~~k------------ 216 (300)
T KOG4391|consen 191 ----IPLVFPFP-MKYIPLL-------------------------------------CYKNKWLSYRK------------ 216 (300)
T ss_pred ----hheeccch-hhHHHHH-------------------------------------HHHhhhcchhh------------
Confidence 00000000 0000000 00101100000
Q ss_pred chhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCc-eeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 295 NWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLL-EEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 295 ~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
. .+.+.|.|++.|.+|.++||...++.+ +..|.. |++.+||++.|.-..- -+-..+.|.+||.
T Consensus 217 ---i------~~~~~P~LFiSGlkDelVPP~~Mr~Ly------~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFla 280 (300)
T KOG4391|consen 217 ---I------GQCRMPFLFISGLKDELVPPVMMRQLY------ELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLA 280 (300)
T ss_pred ---h------ccccCceEEeecCccccCCcHHHHHHH------HhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHH
Confidence 0 055789999999999999999887743 444544 5899999999986332 2456688888887
Q ss_pred h
Q 017221 374 K 374 (375)
Q Consensus 374 ~ 374 (375)
+
T Consensus 281 E 281 (300)
T KOG4391|consen 281 E 281 (300)
T ss_pred H
Confidence 5
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.84 E-value=2.4e-19 Score=138.06 Aligned_cols=187 Identities=20% Similarity=0.208 Sum_probs=129.4
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC---CCCcEEE
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA---DQEKVFV 155 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~---~~~~~~l 155 (375)
.++++++||..........+...|..+ +++++.+|+.|+|.|.+.+. .....+|+.++.+.+.. +.++++|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps-----E~n~y~Di~avye~Lr~~~g~~~~Iil 134 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS-----ERNLYADIKAVYEWLRNRYGSPERIIL 134 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc-----cccchhhHHHHHHHHHhhcCCCceEEE
Confidence 589999999977666555666666653 69999999999999998773 22455566666555543 3369999
Q ss_pred EEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHH
Q 017221 156 VGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFL 235 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (375)
+|+|+|+..++.+|.+.| +.++||.+|......- ++
T Consensus 135 ~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv------------------------------------------~~ 170 (258)
T KOG1552|consen 135 YGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV------------------------------------------AF 170 (258)
T ss_pred EEecCCchhhhhHhhcCC--cceEEEeccchhhhhh------------------------------------------hc
Confidence 999999999999999998 9999999997653110 00
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEe
Q 017221 236 TYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIV 315 (375)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 315 (375)
.... . ..++..+... ...+.++||+|++|
T Consensus 171 ~~~~--------------------------------------------~-~~~~d~f~~i------~kI~~i~~PVLiiH 199 (258)
T KOG1552|consen 171 PDTK--------------------------------------------T-TYCFDAFPNI------EKISKITCPVLIIH 199 (258)
T ss_pred cCcc--------------------------------------------e-EEeecccccc------CcceeccCCEEEEe
Confidence 0000 0 0000000000 01117899999999
Q ss_pred cCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 316 GDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 316 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
|++|.+++.....+.+ +..++..+-.+++|+||.-..-.| ++.+.+..|+.
T Consensus 200 gtdDevv~~sHg~~Ly------e~~k~~~epl~v~g~gH~~~~~~~-~yi~~l~~f~~ 250 (258)
T KOG1552|consen 200 GTDDEVVDFSHGKALY------ERCKEKVEPLWVKGAGHNDIELYP-EYIEHLRRFIS 250 (258)
T ss_pred cccCceecccccHHHH------HhccccCCCcEEecCCCcccccCH-HHHHHHHHHHH
Confidence 9999999998887744 444554467788899999865554 45577777765
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=1.2e-18 Score=144.91 Aligned_cols=114 Identities=39% Similarity=0.688 Sum_probs=92.3
Q ss_pred CCeEEEeeecCC-CCEEEEEcCCCCChhhHHHHHHHHHhC--CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHH
Q 017221 68 NGINMHVAEKGQ-GPLILFIHGFPLLWYSWRHQITALASL--GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLD 144 (375)
Q Consensus 68 ~g~~l~~~~~g~-~~~il~~hG~~~~~~~~~~~~~~L~~~--g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~ 144 (375)
.+..+.|...+. +|+++++||++++...|......+... .|+++.+|+||||.|. . ...+....++++..+++
T Consensus 8 ~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~--~--~~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 8 DGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--P--AGYSLSAYADDLAALLD 83 (282)
T ss_pred CCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC--c--ccccHHHHHHHHHHHHH
Confidence 455556665554 679999999999999988843444332 1899999999999997 1 13344555999999999
Q ss_pred HhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 145 AVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 145 ~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
.++.. +++++|||+||.+++.++.++|++++++|++++...
T Consensus 84 ~~~~~--~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 84 ALGLE--KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HhCCC--ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 99988 799999999999999999999999999999998765
No 65
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.83 E-value=2e-19 Score=173.48 Aligned_cols=273 Identities=18% Similarity=0.228 Sum_probs=147.8
Q ss_pred CCCEEEEEcCCCCChhhHHHH-----HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh---cCCC
Q 017221 79 QGPLILFIHGFPLLWYSWRHQ-----ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV---AADQ 150 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~-----~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l---~~~~ 150 (375)
.+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.|+.+......++.+++..+.+.++.+ ..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~- 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR- 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC-
Confidence 368999999999999999864 8899999999999994 6666543212356666666666555542 334
Q ss_pred CcEEEEEeChHHHHHHHHHHhC-CCccceEEEEccCCCCCCC-CCchhhhHHh---hcCCceEEEeecCCcch-HHHHHh
Q 017221 151 EKVFVVGHDWGALIAWYLCLFR-PDRVKALVNLSVVFNPRNP-NMKPLQVFKA---VYGDDYYICRFQEPGEI-EAEFAQ 224 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~ 224 (375)
+++++||||||.+++.+++.+ +++|+++|+++++...... .......... .+...........|.+. ...+..
T Consensus 142 -~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 142 -DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred -ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 899999999999999998755 5589999999988653221 0000000000 00000000111112111 111111
Q ss_pred cCcHHHHHH---HHhhcCCCCCCCCCCCCCCCCCCCcccCCCC--CCHHHHHHHHHHhhhcCccceeeeeeccccchhhc
Q 017221 225 MGTETVLKE---FLTYRNPGPLFLPKGKGFGHPPDAQIALPSW--LSEEDVKYYASKYEKAGFTGGINYYRNIELNWELL 299 (375)
Q Consensus 225 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
......... ++.................+.. ...| ........+...+...+.... .-+....
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~-----~~~w~~~~g~~~~~~~~~~~~~n~~~~-g~~~~~~------ 288 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLE-----SEGWIAWSGPAISELLKQFIAHNRMMT-GGFAING------ 288 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHH-----HhhccccchHHHHHHHHHHHHhCcccC-ceEEECC------
Confidence 111111211 1111111000000000000000 0000 000111222222211110000 0000000
Q ss_pred ccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeE-EEecCCCCCCCc---cChhHHHHHHHHHHhhC
Q 017221 300 APWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEV-IVMEGVGHFINE---EKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 300 ~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---e~p~~~~~~i~~fl~~~ 375 (375)
....++++++|+|+++|++|.++|++.... +.+..++. ++ .+++++||+.++ ..++++...|.+||+++
T Consensus 289 ~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~------l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 289 QMVTLADITCPVLAFVGEVDDIGQPASVRG------IRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EEcchhhCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 011223899999999999999999987766 56778888 77 678999999755 35789999999999864
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.83 E-value=1.3e-19 Score=144.64 Aligned_cols=197 Identities=25% Similarity=0.344 Sum_probs=122.4
Q ss_pred HHHHHHHHHhCCcEEEEeCCCCCCCCCCCC--CCccccHhHHHHHHHHHHHHh----cCCCCcEEEEEeChHHHHHHHHH
Q 017221 96 WRHQITALASLGYRAVAPDLRGYGDTDAPA--EVPSYTCLHLVGDVIALLDAV----AADQEKVFVVGHDWGALIAWYLC 169 (375)
Q Consensus 96 ~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~--~~~~~~~~~~~~d~~~~l~~l----~~~~~~~~l~G~S~Gg~~a~~~a 169 (375)
|......|+++||.|+.+|+||.+.....- ......-....+|+.+.++.+ .++++++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 345567888999999999999987432110 001111223344555555444 44566999999999999999999
Q ss_pred HhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHH-HHHhhcCCCCCCCCCC
Q 017221 170 LFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLK-EFLTYRNPGPLFLPKG 248 (375)
Q Consensus 170 ~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 248 (375)
.++|+.+++++..+|........... .. +.. .......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~------------------------------~~--~~~~~~~~~~~--------- 121 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTT------------------------------DI--YTKAEYLEYGD--------- 121 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHT------------------------------CC--HHHGHHHHHSS---------
T ss_pred cccceeeeeeeccceecchhcccccc------------------------------cc--cccccccccCc---------
Confidence 99999999999999887654321000 00 000 0111000
Q ss_pred CCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCc--ccccEEEEecCCCcCCCCCC
Q 017221 249 KGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQ--IKVPVKFIVGDLDLTYNAPG 326 (375)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~lii~g~~D~~~~~~~ 326 (375)
.+...+........ .... + +++|+|+++|++|..||+..
T Consensus 122 --------------~~~~~~~~~~~s~~-------------------~~~~------~~~~~~P~li~hG~~D~~Vp~~~ 162 (213)
T PF00326_consen 122 --------------PWDNPEFYRELSPI-------------------SPAD------NVQIKPPVLIIHGENDPRVPPSQ 162 (213)
T ss_dssp --------------TTTSHHHHHHHHHG-------------------GGGG------GCGGGSEEEEEEETTBSSSTTHH
T ss_pred --------------cchhhhhhhhhccc-------------------cccc------cccCCCCEEEEccCCCCccCHHH
Confidence 00011111111110 0000 4 78999999999999999998
Q ss_pred chhhhhcCccccccCCceeEEEecCCCCCCC-ccChhHHHHHHHHHHhhC
Q 017221 327 TKDYINKGGFKKAVPLLEEVIVMEGVGHFIN-EEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 375 (375)
+.++++. +.+...+. +++++|++||.+. .+...++.+.+.+|++++
T Consensus 163 s~~~~~~--L~~~g~~~-~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 163 SLRLYNA--LRKAGKPV-ELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHHHHH--HHHTTSSE-EEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHhcCCCE-EEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 8887744 66666666 9999999999663 455678889999998863
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=2.8e-18 Score=133.96 Aligned_cols=112 Identities=24% Similarity=0.308 Sum_probs=101.2
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
.+||-+||.+|+..+|.++.+.|.+.|.+++.+++||+|.++.+++ ..++-.+...-+.++++.++++ ++++.+|||.
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSr 113 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIK-GKLIFLGHSR 113 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCC-CceEEEEecc
Confidence 4899999999999999999999999999999999999999998775 6789999999999999999997 5899999999
Q ss_pred HHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchh
Q 017221 161 GALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPL 196 (375)
Q Consensus 161 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 196 (375)
||-.|+.++..+| ..|+++++|+.........+.
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~ 147 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPL 147 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCccccccCcCHH
Confidence 9999999999996 789999999988665554443
No 68
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=2.8e-19 Score=163.38 Aligned_cols=230 Identities=23% Similarity=0.261 Sum_probs=148.3
Q ss_pred eEEEECCeEEEeeecCC--------CCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCC---CCCC--C-C
Q 017221 63 KVVNVNGINMHVAEKGQ--------GPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGD---TDAP--A-E 126 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g~--------~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~---S~~~--~-~ 126 (375)
.+...||.+++.+...+ -|+||++||++.... .|....+.|+.+||.|+.+|+||.+. .... . +
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~ 448 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGD 448 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhc
Confidence 34445788888665432 179999999985444 46778889999999999999997644 2111 1 2
Q ss_pred CccccHhHHHHHHHHHHHHhc-CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCC
Q 017221 127 VPSYTCLHLVGDVIALLDAVA-ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGD 205 (375)
Q Consensus 127 ~~~~~~~~~~~d~~~~l~~l~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 205 (375)
......+|+.+.+. +++..+ ++.+++.++|||+||++++..+.+.| .+++.+...+..............
T Consensus 449 ~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~------- 519 (620)
T COG1506 449 WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEG------- 519 (620)
T ss_pred cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchh-------
Confidence 23345666666666 443333 45679999999999999999999988 788888777755421110000000
Q ss_pred ceEEEeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccce
Q 017221 206 DYYICRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGG 285 (375)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (375)
+........ ....+ ..+ .+.
T Consensus 520 ------------------------~~~~~~~~~---------------------~~~~~-~~~---~~~----------- 539 (620)
T COG1506 520 ------------------------LRFDPEENG---------------------GGPPE-DRE---KYE----------- 539 (620)
T ss_pred ------------------------hcCCHHHhC---------------------CCccc-ChH---HHH-----------
Confidence 000000000 00000 000 000
Q ss_pred eeeeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc-cChhHH
Q 017221 286 INYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE-EKPDEV 364 (375)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~ 364 (375)
........ .++++|+|+|||++|..||.+.+.++++. ++....+. +++++|+.||.+.- ++..++
T Consensus 540 -----~~sp~~~~------~~i~~P~LliHG~~D~~v~~~q~~~~~~a--L~~~g~~~-~~~~~p~e~H~~~~~~~~~~~ 605 (620)
T COG1506 540 -----DRSPIFYA------DNIKTPLLLIHGEEDDRVPIEQAEQLVDA--LKRKGKPV-ELVVFPDEGHGFSRPENRVKV 605 (620)
T ss_pred -----hcChhhhh------cccCCCEEEEeecCCccCChHHHHHHHHH--HHHcCceE-EEEEeCCCCcCCCCchhHHHH
Confidence 00000001 18999999999999999999999888744 77777777 99999999999855 567778
Q ss_pred HHHHHHHHhhC
Q 017221 365 NKHIYNFFQKF 375 (375)
Q Consensus 365 ~~~i~~fl~~~ 375 (375)
.+.+.+|++++
T Consensus 606 ~~~~~~~~~~~ 616 (620)
T COG1506 606 LKEILDWFKRH 616 (620)
T ss_pred HHHHHHHHHHH
Confidence 88888888764
No 69
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=5.6e-19 Score=135.17 Aligned_cols=225 Identities=15% Similarity=0.159 Sum_probs=151.4
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
.+..++++|=.||++..|+.+...|... ..++++++||.|.-...+ ...+++++++.+...+.. -...+++.++||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~-~~~d~P~alfGH 81 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLP-PLLDAPFALFGH 81 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhcc-ccCCCCeeeccc
Confidence 3568999999999999999999988875 999999999999775544 567888888888887774 122348999999
Q ss_pred ChHHHHHHHHHHhCCC---ccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHH
Q 017221 159 DWGALIAWYLCLFRPD---RVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFL 235 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (375)
||||++|.++|.+... ...++.+.+........ ...+.......+++.+.
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~---------------------------~~~i~~~~D~~~l~~l~ 134 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR---------------------------GKQIHHLDDADFLADLV 134 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc---------------------------cCCccCCCHHHHHHHHH
Confidence 9999999999988521 25666666543331110 01122223345555554
Q ss_pred hhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEe
Q 017221 236 TYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIV 315 (375)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 315 (375)
......+ ..+.+.++.......-++.+.....+ +... . ..++||+.++.
T Consensus 135 ~lgG~p~--------------------e~led~El~~l~LPilRAD~~~~e~Y-~~~~---~-------~pl~~pi~~~~ 183 (244)
T COG3208 135 DLGGTPP--------------------ELLEDPELMALFLPILRADFRALESY-RYPP---P-------APLACPIHAFG 183 (244)
T ss_pred HhCCCCh--------------------HHhcCHHHHHHHHHHHHHHHHHhccc-ccCC---C-------CCcCcceEEec
Confidence 4332211 11233444444444434333222221 1111 1 17899999999
Q ss_pred cCCCcCCCCCCchhhhhcCccccccC-CceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 316 GDLDLTYNAPGTKDYINKGGFKKAVP-LLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 316 g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
|++|..++.+....| ++... .. +++.++| ||+...++.+++...|.+.+.
T Consensus 184 G~~D~~vs~~~~~~W------~~~t~~~f-~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 184 GEKDHEVSRDELGAW------REHTKGDF-TLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred cCcchhccHHHHHHH------HHhhcCCc-eEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999999998877665 23333 45 9999988 999999999999999998874
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.81 E-value=1.4e-18 Score=140.37 Aligned_cols=106 Identities=21% Similarity=0.172 Sum_probs=87.7
Q ss_pred CCEEEEEcCCCCC----hhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC-CCcEE
Q 017221 80 GPLILFIHGFPLL----WYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD-QEKVF 154 (375)
Q Consensus 80 ~~~il~~hG~~~~----~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~ 154 (375)
.++|||+||+++. ...|..+++.|+++||+|+++|+||||.|.... ...+++++++|+.++++.+... .++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 345677889999999999999999999997654 3457778888888876655321 23899
Q ss_pred EEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 155 VVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
++||||||.+++.++.++|++++++|+++|...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999998765
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=1.9e-18 Score=128.09 Aligned_cols=210 Identities=17% Similarity=0.214 Sum_probs=138.6
Q ss_pred ecCCCCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCC-c
Q 017221 76 EKGQGPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQE-K 152 (375)
Q Consensus 76 ~~g~~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~-~ 152 (375)
..|+...+|++||+-.+.. ....++..|.+.|+.++.+|++|.|.|...-.+ -.....++|+..+++++.-... -
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~--Gn~~~eadDL~sV~q~~s~~nr~v 106 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY--GNYNTEADDLHSVIQYFSNSNRVV 106 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc--CcccchHHHHHHHHHHhccCceEE
Confidence 3466789999999987654 456678889999999999999999999876632 3445566999999999865311 2
Q ss_pred EEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHH
Q 017221 153 VFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLK 232 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
-+++|||-||.+++.+|.++++ ++-+|.+++-......- ...+. ...++
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I--------------------------~eRlg----~~~l~ 155 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGI--------------------------NERLG----EDYLE 155 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcch--------------------------hhhhc----ccHHH
Confidence 3578999999999999999987 88888888766543210 00011 11111
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHh-hhcCccceeeeeeccccchhhcccCcCCcccccE
Q 017221 233 EFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKY-EKAGFTGGINYYRNIELNWELLAPWTGAQIKVPV 311 (375)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 311 (375)
+..... ++....+ .-.....+.++.+......- ...... -..+||+
T Consensus 156 ~ike~G-----------fid~~~r-kG~y~~rvt~eSlmdrLntd~h~aclk---------------------Id~~C~V 202 (269)
T KOG4667|consen 156 RIKEQG-----------FIDVGPR-KGKYGYRVTEESLMDRLNTDIHEACLK---------------------IDKQCRV 202 (269)
T ss_pred HHHhCC-----------ceecCcc-cCCcCceecHHHHHHHHhchhhhhhcC---------------------cCccCce
Confidence 111110 1111110 11112223333333222211 111000 0568999
Q ss_pred EEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc
Q 017221 312 KFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE 358 (375)
Q Consensus 312 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 358 (375)
|-+||..|.++|.+.+.+ +++..|+. ++.++||+.|....
T Consensus 203 LTvhGs~D~IVPve~Ake------fAk~i~nH-~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 203 LTVHGSEDEIVPVEDAKE------FAKIIPNH-KLEIIEGADHNYTG 242 (269)
T ss_pred EEEeccCCceeechhHHH------HHHhccCC-ceEEecCCCcCccc
Confidence 999999999999999988 67889997 99999999999854
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.80 E-value=2.1e-17 Score=128.81 Aligned_cols=266 Identities=20% Similarity=0.213 Sum_probs=173.1
Q ss_pred eeEEEECCeEEEeeecCC----CCEEEEEcCCCCChhh-HHHHH-----HHHHhCCcEEEEeCCCCC--CCCCCCCCCcc
Q 017221 62 HKVVNVNGINMHVAEKGQ----GPLILFIHGFPLLWYS-WRHQI-----TALASLGYRAVAPDLRGY--GDTDAPAEVPS 129 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~----~~~il~~hG~~~~~~~-~~~~~-----~~L~~~g~~v~~~d~~G~--G~S~~~~~~~~ 129 (375)
.+.++..-..+++...|. +|+||-.|..|.+... |+.+. ..+.++ |.++-+|.||+ |...-+.+...
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCC
Confidence 444444445666666653 7899999999987765 66543 466677 99999999998 44444555567
Q ss_pred ccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEE
Q 017221 130 YTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYI 209 (375)
Q Consensus 130 ~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (375)
.|.+++++++..++++++.+ .++-+|.-.|++|..++|..||++|.|+||+++.....+...+....+.
T Consensus 103 Psmd~LAd~l~~VL~~f~lk--~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~--------- 171 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLK--SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVS--------- 171 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcc--eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHH---------
Confidence 89999999999999999999 9999999999999999999999999999999988765443211111111
Q ss_pred EeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcC-ccceeee
Q 017221 210 CRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAG-FTGGINY 288 (375)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 288 (375)
...+........+..++.....+. .... -..+.+..|.+.+.+.- ..+...+
T Consensus 172 ---------s~~l~~~Gmt~~~~d~ll~H~Fg~----------------e~~~--~~~diVq~Yr~~l~~~~N~~Nl~~f 224 (326)
T KOG2931|consen 172 ---------SNLLYYYGMTQGVKDYLLAHHFGK----------------EELG--NNSDIVQEYRQHLGERLNPKNLALF 224 (326)
T ss_pred ---------HHHHHhhchhhhHHHHHHHHHhcc----------------cccc--ccHHHHHHHHHHHHhcCChhHHHHH
Confidence 011111122222222222211110 0000 13355566666554432 2344444
Q ss_pred eeccccchhhcccCc--CCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHH
Q 017221 289 YRNIELNWELLAPWT--GAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNK 366 (375)
Q Consensus 289 ~~~~~~~~~~~~~~~--~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 366 (375)
+.++..+.++..... ...++||++++.|++.+.+... .+. ..+.-|...++..+.++|-.+..++|..+++
T Consensus 225 l~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~v--v~~-----n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~e 297 (326)
T KOG2931|consen 225 LNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAV--VEC-----NSKLDPTYTTLLKMADCGGLVQEEQPGKLAE 297 (326)
T ss_pred HHHhcCCCCccccCCCcCccccccEEEEecCCCchhhhh--hhh-----hcccCcccceEEEEcccCCcccccCchHHHH
Confidence 555544444432221 1156799999999998876432 111 2222333347888899999999999999999
Q ss_pred HHHHHHh
Q 017221 367 HIYNFFQ 373 (375)
Q Consensus 367 ~i~~fl~ 373 (375)
.+.-|++
T Consensus 298 a~~~Flq 304 (326)
T KOG2931|consen 298 AFKYFLQ 304 (326)
T ss_pred HHHHHHc
Confidence 9999986
No 73
>PLN00021 chlorophyllase
Probab=99.79 E-value=6.3e-18 Score=140.43 Aligned_cols=108 Identities=28% Similarity=0.401 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh-----cCCCCc
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV-----AADQEK 152 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l-----~~~~~~ 152 (375)
++.|+|||+||++++...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++.+ ..+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 456999999999999999999999999999999999999875432111 1112222233333322221 122348
Q ss_pred EEEEEeChHHHHHHHHHHhCCC-----ccceEEEEccCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFRPD-----RVKALVNLSVVFN 187 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 187 (375)
++++|||+||.+++.+|.++++ +++++|+++|...
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999999874 5899999998654
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.79 E-value=2.8e-17 Score=136.11 Aligned_cols=109 Identities=24% Similarity=0.309 Sum_probs=74.3
Q ss_pred CCEEEEEcCCCCChhhHHH---HHHHHHhCCcEEEEeCCCCCCC-----CCC-----CCC-----C-c---c-ccHhHHH
Q 017221 80 GPLILFIHGFPLLWYSWRH---QITALASLGYRAVAPDLRGYGD-----TDA-----PAE-----V-P---S-YTCLHLV 136 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~---~~~~L~~~g~~v~~~d~~G~G~-----S~~-----~~~-----~-~---~-~~~~~~~ 136 (375)
.|+|+|+||++++...|.. +...+...|+.|+.+|..++|. +.. ... . . . ...+.+.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 5899999999998877744 3355666799999999887662 110 000 0 0 0 0112233
Q ss_pred HHHHHHHHHh--cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 137 GDVIALLDAV--AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 137 ~d~~~~l~~l--~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
+++...++.. ..+.++++++||||||..|+.++.++|+.+++++.+++...+
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCc
Confidence 4444444332 123348999999999999999999999999999999987653
No 75
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=8.5e-19 Score=142.27 Aligned_cols=283 Identities=17% Similarity=0.151 Sum_probs=166.7
Q ss_pred EECCeEEEeeecCC-----CCEEEEEcCCCCChh-----------hHHHHHH---HHHhCCcEEEEeCCCCCC-CCCCCC
Q 017221 66 NVNGINMHVAEKGQ-----GPLILFIHGFPLLWY-----------SWRHQIT---ALASLGYRAVAPDLRGYG-DTDAPA 125 (375)
Q Consensus 66 ~~~g~~l~~~~~g~-----~~~il~~hG~~~~~~-----------~~~~~~~---~L~~~g~~v~~~d~~G~G-~S~~~~ 125 (375)
.+.+..|.|+.+|. ..+||++||+.+++. .|+.++. .+....|.|++.|..|.+ .|+.|.
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 34677889999985 468999999988544 3444431 233334999999999986 444332
Q ss_pred -----------CCccccHhHHHHHHHHHHHHhcCCCCcEE-EEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCC
Q 017221 126 -----------EVPSYTCLHLVGDVIALLDAVAADQEKVF-VVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNM 193 (375)
Q Consensus 126 -----------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~ 193 (375)
.++..++.|++.--..+++++|++ ++. ++|.||||+.|+.++..||++|+.+|.++++........
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNI 189 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHH
Confidence 234578889999889999999999 876 899999999999999999999999999998665433222
Q ss_pred chhhhHHhhcC------CceEEEeecCCcchHH---HHH--hcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCC
Q 017221 194 KPLQVFKAVYG------DDYYICRFQEPGEIEA---EFA--QMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALP 262 (375)
Q Consensus 194 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (375)
......+.... .+-|.. -..|...-+ .+. ..-....+..-+........ ..
T Consensus 190 a~~~~~r~AI~~DP~~n~G~Y~~-~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~-----------------~~ 251 (368)
T COG2021 190 AFNEVQRQAIEADPDWNGGDYYE-GTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADP-----------------LR 251 (368)
T ss_pred HHHHHHHHHHHhCCCccCCCccC-CCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccc-----------------cC
Confidence 22222222111 111111 111211111 111 11112222222221110000 00
Q ss_pred CCCCHHHHHHHHHHhh--------hcCccceeeeeeccccchhh-cccCcCCcccccEEEEecCCCcCCCCCCchhhhhc
Q 017221 263 SWLSEEDVKYYASKYE--------KAGFTGGINYYRNIELNWEL-LAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINK 333 (375)
Q Consensus 263 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~ 333 (375)
..-....++.|.+..- ...+..........+..... .....++++++|++++.-+.|.+.|++..+.
T Consensus 252 ~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~---- 327 (368)
T COG2021 252 GGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA---- 327 (368)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH----
Confidence 0011223333333221 11111111112222222110 0011123899999999999999999998876
Q ss_pred CccccccCCceeEEEec-CCCCCCCccChhHHHHHHHHHHhh
Q 017221 334 GGFKKAVPLLEEVIVME-GVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 334 ~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
+.+.++....+++++ ..||..++...+.+...|..||+.
T Consensus 328 --~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 328 --LAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred --HHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 666777762265554 569999999999999999999975
No 76
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.79 E-value=1.7e-18 Score=137.27 Aligned_cols=263 Identities=17% Similarity=0.185 Sum_probs=146.1
Q ss_pred EEEECCeEEEeeecCC----CCEEEEEcCCCCChhh-HHHHH-----HHHHhCCcEEEEeCCCCCCCC--CCCCCCcccc
Q 017221 64 VVNVNGINMHVAEKGQ----GPLILFIHGFPLLWYS-WRHQI-----TALASLGYRAVAPDLRGYGDT--DAPAEVPSYT 131 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~----~~~il~~hG~~~~~~~-~~~~~-----~~L~~~g~~v~~~d~~G~G~S--~~~~~~~~~~ 131 (375)
.++..-..+++...|+ +|+||-.|-.|.|... |..+. ..+.++ |.++-+|.||+..- .-+.+....|
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccC
Confidence 3445555677666663 7999999999988776 66654 456565 99999999999553 3444545779
Q ss_pred HhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEe
Q 017221 132 CLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICR 211 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (375)
.+++++++..++++++++ .++.+|...|+.|..++|.++|++|.|+||+++.....+......+.+.. ++...
T Consensus 82 md~LAe~l~~Vl~~f~lk--~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~-----~~L~~ 154 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLK--SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSS-----WLLYS 154 (283)
T ss_dssp HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-----------
T ss_pred HHHHHHHHHHHHHhCCcc--EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhc-----ccccc
Confidence 999999999999999999 99999999999999999999999999999999988764432111111110 00000
Q ss_pred ecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhh-cCccceeeeee
Q 017221 212 FQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEK-AGFTGGINYYR 290 (375)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 290 (375)
......... .++.+.+..... . -..+.+..|...+.+ .+......++.
T Consensus 155 ~gmt~~~~d--------~Ll~h~Fg~~~~---------------------~--~n~Dlv~~yr~~l~~~~Np~Nl~~f~~ 203 (283)
T PF03096_consen 155 YGMTSSVKD--------YLLWHYFGKEEE---------------------E--NNSDLVQTYRQHLDERINPKNLALFLN 203 (283)
T ss_dssp -CTTS-HHH--------HHHHHHS-HHHH---------------------H--CT-HHHHHHHHHHHT-TTHHHHHHHHH
T ss_pred cccccchHH--------hhhhcccccccc---------------------c--ccHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 111111111 111111111000 0 022344455554443 22234444455
Q ss_pred ccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHH
Q 017221 291 NIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYN 370 (375)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 370 (375)
.+..+.++..... ...||+|++.|+..+.... ..+. ..+..|...++..++++|=++..|+|+.+++.+.-
T Consensus 204 sy~~R~DL~~~~~--~~~c~vLlvvG~~Sp~~~~--vv~~-----ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 204 SYNSRTDLSIERP--SLGCPVLLVVGDNSPHVDD--VVEM-----NSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp HHHT-----SECT--TCCS-EEEEEETTSTTHHH--HHHH-----HHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred HHhccccchhhcC--CCCCCeEEEEecCCcchhh--HHHH-----HhhcCcccceEEEecccCCcccccCcHHHHHHHHH
Confidence 5544444433322 6679999999998876532 2221 22333444589999999999999999999999999
Q ss_pred HHhh
Q 017221 371 FFQK 374 (375)
Q Consensus 371 fl~~ 374 (375)
||+-
T Consensus 275 FlQG 278 (283)
T PF03096_consen 275 FLQG 278 (283)
T ss_dssp HHHH
T ss_pred HHcc
Confidence 9974
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.78 E-value=6.5e-17 Score=133.79 Aligned_cols=110 Identities=25% Similarity=0.383 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCCCChhhHHHH--HHHHH-hCCcEEEEeCC--CCCCCCCCCC------------------CCccccH-hH
Q 017221 79 QGPLILFIHGFPLLWYSWRHQ--ITALA-SLGYRAVAPDL--RGYGDTDAPA------------------EVPSYTC-LH 134 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~--~~~L~-~~g~~v~~~d~--~G~G~S~~~~------------------~~~~~~~-~~ 134 (375)
+.|+|+++||++++...|... +..++ +.|+.|+++|. +|+|.+.... ....+.. ..
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 368999999999988887542 34454 46899999998 5555332100 0001222 33
Q ss_pred HHHHHHHHHHH-hcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 135 LVGDVIALLDA-VAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 135 ~~~d~~~~l~~-l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
+++++..+++. .+++.++++++||||||.+++.++.++|+.++++++++|...+
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 46777777776 3445458999999999999999999999999999999987653
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.78 E-value=1.3e-17 Score=133.14 Aligned_cols=245 Identities=20% Similarity=0.225 Sum_probs=137.5
Q ss_pred CCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC--CCCcEEE
Q 017221 80 GPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA--DQEKVFV 155 (375)
Q Consensus 80 ~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~~~~l 155 (375)
+|.||++||+.|++. .-+.+.+.+.++||.|+++++||++.+.... +...-.-..+|+..+++.+.. .+.++..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~--p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS--PRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC--cceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 689999999876554 3366788899999999999999999886533 222222333677777777643 2459999
Q ss_pred EEeChHH-HHHHHHHHhCCC-ccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHH
Q 017221 156 VGHDWGA-LIAWYLCLFRPD-RVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKE 233 (375)
Q Consensus 156 ~G~S~Gg-~~a~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (375)
+|.|+|| +++..++.+-.+ .+.+.+.++.+....... ..+. . ..+. ..+.+. ....+.+
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~----~~l~----~---------~~s~-~ly~r~-l~~~L~~ 213 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACA----YRLD----S---------GFSL-RLYSRY-LLRNLKR 213 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHH----HHhc----C---------chhh-hhhHHH-HHHHHHH
Confidence 9999999 555555544322 366666666554421100 0000 0 0000 001110 0011111
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHH--HHHh------hhcCccceeeeeeccccchhhcccCcCC
Q 017221 234 FLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYY--ASKY------EKAGFTGGINYYRNIELNWELLAPWTGA 305 (375)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (375)
......... . ...+..+ .+.++.. ...+ ..-++.+...+|+.-.....+.
T Consensus 214 ~~~~kl~~l---~------------~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~------ 271 (345)
T COG0429 214 NAARKLKEL---E------------PSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLP------ 271 (345)
T ss_pred HHHHHHHhc---C------------cccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccc------
Confidence 111100000 0 0000000 1111111 1111 1234445555565555555444
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCcccc-ccCCceeEEEecCCCCCCCcc----Chh-HHHHHHHHHHhh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKK-AVPLLEEVIVMEGVGHFINEE----KPD-EVNKHIYNFFQK 374 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gH~~~~e----~p~-~~~~~i~~fl~~ 374 (375)
+|.+|+|||++.+|++++++..-+ ... ..|+. .+.+-+.+||.-++. +|. ...+.+.+|++.
T Consensus 272 ~Ir~PtLii~A~DDP~~~~~~iP~------~~~~~np~v-~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 272 KIRKPTLIINAKDDPFMPPEVIPK------LQEMLNPNV-LLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred ccccceEEEecCCCCCCChhhCCc------chhcCCCce-EEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 899999999999999999976654 223 66777 899999999998877 343 445667777754
No 79
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.78 E-value=3.4e-18 Score=137.12 Aligned_cols=292 Identities=20% Similarity=0.337 Sum_probs=183.6
Q ss_pred ceeEEEECCeEEEeeecCC--------CCEEEEEcCCCCChhhHHHHHHHHHhC---------CcEEEEeCCCCCCCCCC
Q 017221 61 QHKVVNVNGINMHVAEKGQ--------GPLILFIHGFPLLWYSWRHQITALASL---------GYRAVAPDLRGYGDTDA 123 (375)
Q Consensus 61 ~~~~~~~~g~~l~~~~~g~--------~~~il~~hG~~~~~~~~~~~~~~L~~~---------g~~v~~~d~~G~G~S~~ 123 (375)
.+..+++.|.+||+....+ -.+++++|||+|+-.++..+++.|.+. -|.|+++.+||+|-|+.
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~ 204 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDA 204 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcC
Confidence 4556788999999876532 148999999999999999999999753 28999999999999998
Q ss_pred CCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCc---------
Q 017221 124 PAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMK--------- 194 (375)
Q Consensus 124 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~--------- 194 (375)
+.. ........|.-+..++-.+|.+ ++.+-|..+|+.|+..+|..+|++|.|+=+-.+...+......
T Consensus 205 ~sk-~GFn~~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~s~l~~~~~a~~~~ 281 (469)
T KOG2565|consen 205 PSK-TGFNAAATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPFSTLKLLYYAGFFP 281 (469)
T ss_pred Ccc-CCccHHHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcHHHHHHHHHHHhcc
Confidence 775 5778889999999999999999 9999999999999999999999999988655444332111000
Q ss_pred -------hhhh--------HHhhc-CCceEEEeecCCcchHHHHHhcC---cHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q 017221 195 -------PLQV--------FKAVY-GDDYYICRFQEPGEIEAEFAQMG---TETVLKEFLTYRNPGPLFLPKGKGFGHPP 255 (375)
Q Consensus 195 -------~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (375)
..+. +..+. ..+++......|......+.... ..-+++++.+...+.....+...+
T Consensus 282 ~~~l~sre~~d~~~p~~~~~~~lmeesgYfhiqaTkpdTiGaAl~dsPvGlAaYIleKfstwTn~~~r~l~dggL----- 356 (469)
T KOG2565|consen 282 GQFLPSREFQDFHFPVGKKFDQLMEESGYFHIQATKPDTIGAALNDSPVGLAAYILEKFSTWTNTEFRSLPDGGL----- 356 (469)
T ss_pred cccCcchhHHHhhchhHHHHHHHHHhcCceEEecCCcchhhhhhccCchHHHHHHHHHHhhccChhhhhCCCCch-----
Confidence 0000 11111 12333334444444444443322 122333333332222222211111
Q ss_pred CCcccCCCCCCHHHH-HHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcC
Q 017221 256 DAQIALPSWLSEEDV-KYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKG 334 (375)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~ 334 (375)
...++-+++ ....-.+..........+|............++..++.+|+-+-.+..|..-.++..
T Consensus 357 ------~krFt~D~lltnvmiYwlT~si~ss~r~y~e~~~~~~r~~~~~r~~v~vPtg~a~f~~el~~~~~~~------- 423 (469)
T KOG2565|consen 357 ------NKRFTMDELLTNVMIYWLTNSITSSQRFYDESFNQRQRDLALDRVQVRVPTGCARFKFELWHTSDDV------- 423 (469)
T ss_pred ------heeecHHHHhhhhhhheecCcchhhHHHHHHHHhHHHHHHHhhccccccchhhhccccchhhCcHHH-------
Confidence 111122222 222222222223333333333222211122222227788999988888876544322
Q ss_pred ccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 335 GFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
++...+|-+.....+++||+..+|.|+.+++.+.+|+++
T Consensus 424 -lrdky~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~ 462 (469)
T KOG2565|consen 424 -LRDKYPNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEK 462 (469)
T ss_pred -HhhhcccceeeEeccCCcchhhhhCcHHHHHHHHHHHHH
Confidence 667888875667778889999999999999999999875
No 80
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=1.8e-17 Score=137.35 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=146.3
Q ss_pred CCCEEEEEcCCCCChh-h-HHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEE
Q 017221 79 QGPLILFIHGFPLLWY-S-WRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVF 154 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~-~-~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~ 154 (375)
..|.||++||..+++. . .+.++....+.||+|++++.||+|.|.-.. +..-.....+|+.++++++... ..+..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT--pr~f~ag~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT--PRLFTAGWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC--CceeecCCHHHHHHHHHHHHHhCCCCceE
Confidence 3599999999876554 3 356777788889999999999999987544 2333445567788888877654 34799
Q ss_pred EEEeChHHHHHHHHHHhCCCc--cceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHH
Q 017221 155 VVGHDWGALIAWYLCLFRPDR--VKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLK 232 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
.+|.||||.+.+.|..+..++ +.+.+.++.+.+.-. ....+.......+..
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~---------------------------~~~~~~~~~~~~~y~ 254 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLA---------------------------ASRSIETPLYRRFYN 254 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhh---------------------------hhhHHhcccchHHHH
Confidence 999999999999999886543 455555554443210 000111111111111
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhh--cCccceeeeeeccccchhhcccCcCCccccc
Q 017221 233 EFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEK--AGFTGGINYYRNIELNWELLAPWTGAQIKVP 310 (375)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 310 (375)
+++..............+.+. ............+..+.+.+.. .++.....+|+.......+. +|++|
T Consensus 255 ~~l~~~l~~~~~~~r~~~~~~----~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~------~I~VP 324 (409)
T KOG1838|consen 255 RALTLNLKRIVLRHRHTLFED----PVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVD------KIKVP 324 (409)
T ss_pred HHHHHhHHHHHhhhhhhhhhc----cchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcc------ccccc
Confidence 111111000000000000000 0000011111334444444332 34455555666665555554 89999
Q ss_pred EEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccC----hhHHHHH-HHHHHhh
Q 017221 311 VKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEK----PDEVNKH-IYNFFQK 374 (375)
Q Consensus 311 ~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~-i~~fl~~ 374 (375)
+++|++.+|+++|+...-.- ..+..|+. -+++-..+||..++|. +..+.+. +.+|+.+
T Consensus 325 ~L~ina~DDPv~p~~~ip~~-----~~~~np~v-~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 325 LLCINAADDPVVPEEAIPID-----DIKSNPNV-LLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred EEEEecCCCCCCCcccCCHH-----HHhcCCcE-EEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 99999999999998654321 44566776 7777777899998886 3344444 6666653
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=4.2e-17 Score=130.56 Aligned_cols=184 Identities=28% Similarity=0.351 Sum_probs=119.6
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCC-CCCCCCCccc--------cHhHHHHHHHHHHHHhcCC
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGD-TDAPAEVPSY--------TCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~-S~~~~~~~~~--------~~~~~~~d~~~~l~~l~~~ 149 (375)
+.|.||++|++.|-....+.+++.|+++||.|+++|+-+-.. .......... ..+...+++.+.++.+...
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 578999999998877778889999999999999999864433 1111100000 1245667777777777543
Q ss_pred ----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhc
Q 017221 150 ----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQM 225 (375)
Q Consensus 150 ----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
.+++.++|+|+||.+++.++.+. +.+++.+..-|.......
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~---------------------------------- 137 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPP---------------------------------- 137 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGH----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcc----------------------------------
Confidence 35999999999999999999887 579999988872111000
Q ss_pred CcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCC
Q 017221 226 GTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGA 305 (375)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (375)
. +.. .
T Consensus 138 -----~------------------------------------~~~----------------------------------~ 142 (218)
T PF01738_consen 138 -----L------------------------------------EDA----------------------------------P 142 (218)
T ss_dssp -----H------------------------------------HHG----------------------------------G
T ss_pred -----h------------------------------------hhh----------------------------------c
Confidence 0 000 0
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccCh--------hHHHHHHHHHHhhC
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKP--------DEVNKHIYNFFQKF 375 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 375 (375)
++++|+++++|++|..++.+....+.+ .+.+..... ++++|+|++|.+..... ++-.+.+.+||+++
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~--~l~~~~~~~-~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEE--ALKAAGVDV-EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHH--HHHCTTTTE-EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHH--HHHhcCCcE-EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999886555432 254555666 99999999999865432 45667788888775
No 82
>PRK10162 acetyl esterase; Provisional
Probab=99.73 E-value=5.2e-16 Score=130.88 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=77.8
Q ss_pred CCEEEEEcCCC---CChhhHHHHHHHHHh-CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEE
Q 017221 80 GPLILFIHGFP---LLWYSWRHQITALAS-LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFV 155 (375)
Q Consensus 80 ~~~il~~hG~~---~~~~~~~~~~~~L~~-~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l 155 (375)
.|+||++||+| ++...|..++..|++ .|+.|+.+|+|.......+. ...+..+..+.+.+..+.++++.+++++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 68999999987 566778888888887 49999999999755432222 1122333334444444556666669999
Q ss_pred EEeChHHHHHHHHHHhC------CCccceEEEEccCCCC
Q 017221 156 VGHDWGALIAWYLCLFR------PDRVKALVNLSVVFNP 188 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~~ 188 (375)
+|+|+||.+++.++... +..+.++|++.|....
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 99999999999998753 3578999999887653
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.71 E-value=1.9e-16 Score=126.29 Aligned_cols=182 Identities=24% Similarity=0.245 Sum_probs=107.7
Q ss_pred CCCEEEEEcCCCCChhhHHHHHH-HHHhCCcEEEEeCCCC------CCC---CCC-----CCCC--ccccHhHHHHHHHH
Q 017221 79 QGPLILFIHGFPLLWYSWRHQIT-ALASLGYRAVAPDLRG------YGD---TDA-----PAEV--PSYTCLHLVGDVIA 141 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~-~L~~~g~~v~~~d~~G------~G~---S~~-----~~~~--~~~~~~~~~~d~~~ 141 (375)
..++|||+||.|.+...+..... .+......++.++-|. .|. +-. .... ....+.+.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 36899999999999976665554 2222357777776542 232 111 0100 11233344445555
Q ss_pred HHHHh---cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcch
Q 017221 142 LLDAV---AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEI 218 (375)
Q Consensus 142 ~l~~l---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
+++.. +++.+++++.|+|.||.+|+.++.++|+.+.++|.+++.........
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~------------------------- 147 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE------------------------- 147 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-------------------------
Confidence 55543 34556999999999999999999999999999999998654321100
Q ss_pred HHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhh
Q 017221 219 EAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWEL 298 (375)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
. ..
T Consensus 148 -------------------------------------------------~----------------------------~~ 150 (216)
T PF02230_consen 148 -------------------------------------------------D----------------------------RP 150 (216)
T ss_dssp -------------------------------------------------C----------------------------CH
T ss_pred -------------------------------------------------c----------------------------cc
Confidence 0 00
Q ss_pred cccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 299 LAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 299 ~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
. ..-++|++++||++|.++|.+..++.. +.+.+...+. +++.|+|.||... .+..+.+.+||++
T Consensus 151 ~-----~~~~~pi~~~hG~~D~vvp~~~~~~~~--~~L~~~~~~v-~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 151 E-----ALAKTPILIIHGDEDPVVPFEWAEKTA--EFLKAAGANV-EFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp C-----CCCTS-EEEEEETT-SSSTHHHHHHHH--HHHHCTT-GE-EEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred c-----ccCCCcEEEEecCCCCcccHHHHHHHH--HHHHhcCCCE-EEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 0 022689999999999999988776644 2366666666 9999999999885 3444677888775
No 84
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.71 E-value=8.8e-16 Score=122.14 Aligned_cols=110 Identities=20% Similarity=0.200 Sum_probs=76.6
Q ss_pred CCCCEEEEEcCCCCChhhHH---HHHHHHHhCCcEEEEeCCCCCCCCCCCCCC---cc-ccHhHHHHHHHHHHH----Hh
Q 017221 78 GQGPLILFIHGFPLLWYSWR---HQITALASLGYRAVAPDLRGYGDTDAPAEV---PS-YTCLHLVGDVIALLD----AV 146 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~---~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~---~~-~~~~~~~~d~~~~l~----~l 146 (375)
++.|+||++||.+++...+. .+...+.+.||.|+++|++|++.+....+. .. ........++.++++ ..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 35799999999998887765 244455557999999999998754321000 00 000112333333333 33
Q ss_pred cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 147 AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 147 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+++.++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 45556999999999999999999999999999998887653
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.69 E-value=1.7e-15 Score=110.85 Aligned_cols=170 Identities=23% Similarity=0.330 Sum_probs=119.8
Q ss_pred CCEEEEEcCC-----CCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC---CCC
Q 017221 80 GPLILFIHGF-----PLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA---DQE 151 (375)
Q Consensus 80 ~~~il~~hG~-----~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~---~~~ 151 (375)
.|..|++|.- ..+...-..++..|.+.||.++.+|+||.|.|...-+ ... -..+|..+.++.+.. +..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD-~Gi---GE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD-NGI---GELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc-CCc---chHHHHHHHHHHHHhhCCCch
Confidence 6788888853 2333445678888999999999999999999987654 122 223455555555543 322
Q ss_pred cEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHH
Q 017221 152 KVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVL 231 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (375)
...+.|+|+|+++++.+|.+.|+ ....|.+.|+....+-
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~df---------------------------------------- 142 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYDF---------------------------------------- 142 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchhh----------------------------------------
Confidence 44689999999999999999875 6666666665431100
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccE
Q 017221 232 KEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPV 311 (375)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 311 (375)
. .+....+|.
T Consensus 143 ---s-------------------------------------------------------------------~l~P~P~~~ 152 (210)
T COG2945 143 ---S-------------------------------------------------------------------FLAPCPSPG 152 (210)
T ss_pred ---h-------------------------------------------------------------------hccCCCCCc
Confidence 0 000567899
Q ss_pred EEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 312 KFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 312 lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
++|+|+.|.+++.....+|. +. ... +++.+++++|+++. +-..+.+.|.+||.
T Consensus 153 lvi~g~~Ddvv~l~~~l~~~------~~-~~~-~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 153 LVIQGDADDVVDLVAVLKWQ------ES-IKI-TVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred eeEecChhhhhcHHHHHHhh------cC-CCC-ceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 99999999998887666542 22 233 78899999999974 56678889999884
No 86
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.68 E-value=3.4e-15 Score=124.31 Aligned_cols=230 Identities=22% Similarity=0.285 Sum_probs=126.9
Q ss_pred eeEEEECCeEEEe---eec---CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCC-CCCCC---------
Q 017221 62 HKVVNVNGINMHV---AEK---GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGD-TDAPA--------- 125 (375)
Q Consensus 62 ~~~~~~~g~~l~~---~~~---g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~-S~~~~--------- 125 (375)
..+...+|..|+- ... ++-|+||.+||.++....|.... .++..||.|+.+|.||+|. +....
T Consensus 59 v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred EEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 4455567877762 222 23479999999999877776554 4678899999999999993 31110
Q ss_pred -------C-CccccHhHHHHHHHHHHHHhc----CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCC
Q 017221 126 -------E-VPSYTCLHLVGDVIALLDAVA----ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNM 193 (375)
Q Consensus 126 -------~-~~~~~~~~~~~d~~~~l~~l~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~ 193 (375)
+ ...+-+..+..|....++.+. ++.+++.+.|.|+||.+++.+|+..| +|++++...|......
T Consensus 138 ~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~--- 213 (320)
T PF05448_consen 138 HITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFR--- 213 (320)
T ss_dssp STTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHH---
T ss_pred HHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchh---
Confidence 0 122233445677777777664 23569999999999999999999985 6999999998765311
Q ss_pred chhhhHHhhcCCceEEEeecCCcchHHHHHh---cCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHH
Q 017221 194 KPLQVFKAVYGDDYYICRFQEPGEIEAEFAQ---MGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDV 270 (375)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (375)
..+.. .....-+..++...... ....+.+
T Consensus 214 --------------------------~~~~~~~~~~~y~~~~~~~~~~d~~----------------------~~~~~~v 245 (320)
T PF05448_consen 214 --------------------------RALELRADEGPYPEIRRYFRWRDPH----------------------HEREPEV 245 (320)
T ss_dssp --------------------------HHHHHT--STTTHHHHHHHHHHSCT----------------------HCHHHHH
T ss_pred --------------------------hhhhcCCccccHHHHHHHHhccCCC----------------------cccHHHH
Confidence 00000 00111122222211000 0011111
Q ss_pred HHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEec
Q 017221 271 KYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVME 350 (375)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (375)
......++..++.. +|+||+++-.|-.|..|||......+ +.++..|++.++|
T Consensus 246 ~~~L~Y~D~~nfA~---------------------ri~~pvl~~~gl~D~~cPP~t~fA~y------N~i~~~K~l~vyp 298 (320)
T PF05448_consen 246 FETLSYFDAVNFAR---------------------RIKCPVLFSVGLQDPVCPPSTQFAAY------NAIPGPKELVVYP 298 (320)
T ss_dssp HHHHHTT-HHHHGG---------------------G--SEEEEEEETT-SSS-HHHHHHHH------CC--SSEEEEEET
T ss_pred HHHHhhhhHHHHHH---------------------HcCCCEEEEEecCCCCCCchhHHHHH------hccCCCeeEEecc
Confidence 11111111111111 89999999999999999998876643 4444446999999
Q ss_pred CCCCCCCccChhHH-HHHHHHHHhhC
Q 017221 351 GVGHFINEEKPDEV-NKHIYNFFQKF 375 (375)
Q Consensus 351 ~~gH~~~~e~p~~~-~~~i~~fl~~~ 375 (375)
..||.... +. .+...+||++|
T Consensus 299 ~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 299 EYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp T--SSTTH----HHHHHHHHHHHHH-
T ss_pred CcCCCchh----hHHHHHHHHHHhcC
Confidence 99997643 33 56777787765
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.68 E-value=1.9e-15 Score=131.59 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=85.4
Q ss_pred CCEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCc
Q 017221 80 GPLILFIHGFPLLWYSW-----RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEK 152 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~-----~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~ 152 (375)
+++||+++.+-.....+ +.+++.|.++||.|+.+|+++-+.++ ...+++++++.+.+.++.+... .++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57999999987555555 46899999999999999999876553 3567888888888888776421 348
Q ss_pred EEEEEeChHHHHHHH----HHHhCCC-ccceEEEEccCCCCC
Q 017221 153 VFVVGHDWGALIAWY----LCLFRPD-RVKALVNLSVVFNPR 189 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~----~a~~~p~-~v~~lil~~~~~~~~ 189 (375)
+.++|+|+||.+++. +++++++ +|++++++.++.+..
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999999997 8888886 799999999887754
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=1.2e-14 Score=116.12 Aligned_cols=181 Identities=25% Similarity=0.326 Sum_probs=134.2
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCC-CCCCCCCCC----c-----cccHhHHHHHHHHHHHHhcC-
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGY-GDTDAPAEV----P-----SYTCLHLVGDVIALLDAVAA- 148 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~-G~S~~~~~~----~-----~~~~~~~~~d~~~~l~~l~~- 148 (375)
.|.||++|+..+-....+.+++.|+..||.|+++|+-+. |.+....+. . ..+..+...|+.+.++.+..
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 489999999998888999999999999999999998763 333222110 0 12336788889988888862
Q ss_pred ---CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhc
Q 017221 149 ---DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQM 225 (375)
Q Consensus 149 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
+.++|.++|+||||.+++.++.+.| .+++.+..-+........
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~--------------------------------- 152 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA--------------------------------- 152 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc---------------------------------
Confidence 3468999999999999999999887 699999888765432210
Q ss_pred CcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCC
Q 017221 226 GTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGA 305 (375)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (375)
. . .
T Consensus 153 -----------------------------------------~--------------------------------~----~ 155 (236)
T COG0412 153 -----------------------------------------D--------------------------------A----P 155 (236)
T ss_pred -----------------------------------------c--------------------------------c----c
Confidence 0 0 0
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccC-----------hhHHHHHHHHHHhh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEK-----------PDEVNKHIYNFFQK 374 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-----------p~~~~~~i~~fl~~ 374 (375)
++++|++++.|+.|..+|......+. +.+.+..... ++.+++++.|.++.+. .++-.+.+.+|+++
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~--~~~~~~~~~~-~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALA--AALEDAGVKV-DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHH--HHHHhcCCCe-eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999988666543 1233333355 8999999999987442 14566777778765
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.66 E-value=2.4e-15 Score=128.72 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCCCh--hhHHH-HHHHHHh--CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh----cCC
Q 017221 79 QGPLILFIHGFPLLW--YSWRH-QITALAS--LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV----AAD 149 (375)
Q Consensus 79 ~~~~il~~hG~~~~~--~~~~~-~~~~L~~--~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l----~~~ 149 (375)
++|++|++||++++. ..|.. +.+.|.. ..|+|+++|++|+|.|..+.. .......++++.++++.+ +.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCCC
Confidence 479999999998653 45655 5555542 259999999999998876542 233466777777777765 333
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
.++++|+||||||.+|..++.++|++|.++++++|+..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 34999999999999999999999999999999998754
No 90
>COG0400 Predicted esterase [General function prediction only]
Probab=99.64 E-value=3.9e-15 Score=114.73 Aligned_cols=172 Identities=17% Similarity=0.125 Sum_probs=116.9
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCC--CCCCCC--CCCCccc-------cHhHHHHHHHHHHHHhcC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRG--YGDTDA--PAEVPSY-------TCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G--~G~S~~--~~~~~~~-------~~~~~~~d~~~~l~~l~~ 148 (375)
.|+||++||+|++..++-++...+..+ +.++.+-=+- .|.-.. -.+...+ ....+++.+..+.+..++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999988888866666554 5655542110 000000 0001122 233444455555566677
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhcCcH
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTE 228 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
+.++++++|+|.|+.+++.+..++|+.++++|+++|........
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~------------------------------------ 140 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL------------------------------------ 140 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc------------------------------------
Confidence 66799999999999999999999999999999999876543210
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCccc
Q 017221 229 TVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIK 308 (375)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (375)
. . ..-.
T Consensus 141 -------------------------------------~-~------------------------------------~~~~ 146 (207)
T COG0400 141 -------------------------------------L-P------------------------------------DLAG 146 (207)
T ss_pred -------------------------------------c-c------------------------------------ccCC
Confidence 0 0 0346
Q ss_pred ccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHH
Q 017221 309 VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNK 366 (375)
Q Consensus 309 ~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 366 (375)
.|+++++|+.|++||.....+.. +.+.+..-++ +...++ .||....+.-+...+
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~--~~l~~~g~~v-~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALA--EYLTASGADV-EVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHH--HHHHHcCCCE-EEEEec-CCCcCCHHHHHHHHH
Confidence 89999999999999998877654 2355656666 889998 699986554444444
No 91
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.63 E-value=1.1e-14 Score=121.96 Aligned_cols=129 Identities=20% Similarity=0.249 Sum_probs=83.1
Q ss_pred ccccceeEEEECCeEEE-eee--cCC--CCEEEEEcCCCCChhhHHH-HHHHHHhCCcEEEEeCCCCCCCCCCCCCCccc
Q 017221 57 EEDIQHKVVNVNGINMH-VAE--KGQ--GPLILFIHGFPLLWYSWRH-QITALASLGYRAVAPDLRGYGDTDAPAEVPSY 130 (375)
Q Consensus 57 ~~~~~~~~~~~~g~~l~-~~~--~g~--~~~il~~hG~~~~~~~~~~-~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~ 130 (375)
...++...+...|..|. |.. .+. .|+||++.|..+-.+++.. +.+.|..+|+.++++|.||.|.|...+- ..
T Consensus 162 ~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~ 239 (411)
T PF06500_consen 162 DYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQ 239 (411)
T ss_dssp SSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S
T ss_pred CCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--Cc
Confidence 33445556677777765 222 222 4788888888887766544 4567899999999999999999865441 22
Q ss_pred cHhHHHHHHHHHHHHhc-CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 131 TCLHLVGDVIALLDAVA-ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 131 ~~~~~~~d~~~~l~~l~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+.+.+...+.+.+.... ++..+|.++|.|+||.+|.++|..++++++++|..+++..
T Consensus 240 D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 240 DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp -CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 33445555555554432 3456999999999999999999988899999999998865
No 92
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.63 E-value=1.9e-15 Score=124.09 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=85.6
Q ss_pred CeEEEeeecCC-CCEEEEEcCCCCCh-hhHHH-HHHHHH-hCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHH
Q 017221 69 GINMHVAEKGQ-GPLILFIHGFPLLW-YSWRH-QITALA-SLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLD 144 (375)
Q Consensus 69 g~~l~~~~~g~-~~~il~~hG~~~~~-~~~~~-~~~~L~-~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~ 144 (375)
+..+.+....+ +|++|++||++++. ..|.. +.+.+. ..+|+|+++|++|++.+..+. ...+.....+++.++++
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHH
Confidence 44555555544 79999999999887 56654 444444 457999999999984432221 22345555666666666
Q ss_pred Hh----cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 145 AV----AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 145 ~l----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
.+ +.+.++++++||||||.+|..++.++|++|.++++++|+...
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 65 333458999999999999999999999999999999987653
No 93
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.60 E-value=3.5e-14 Score=128.96 Aligned_cols=118 Identities=19% Similarity=0.258 Sum_probs=91.7
Q ss_pred ECCeEEEeeec-----CCCCEEEEEcCCCCChh---hH-HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHH
Q 017221 67 VNGINMHVAEK-----GQGPLILFIHGFPLLWY---SW-RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVG 137 (375)
Q Consensus 67 ~~g~~l~~~~~-----g~~~~il~~hG~~~~~~---~~-~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~ 137 (375)
.||.+|++... ++.|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|..... ..+ .+.++
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~ 80 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAA 80 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccch
Confidence 36777774332 24689999999997653 12 234567888999999999999999986542 233 56788
Q ss_pred HHHHHHHHhcCC---CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 138 DVIALLDAVAAD---QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 138 d~~~~l~~l~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
|+.++++.+... ..++.++|||+||.+++.+|..+|+.++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 888888887542 34899999999999999999999999999998887654
No 94
>PRK10115 protease 2; Provisional
Probab=99.60 E-value=9.2e-14 Score=128.18 Aligned_cols=126 Identities=16% Similarity=0.180 Sum_probs=94.6
Q ss_pred eEEEECCeEEEee-e-------cCCCCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCC---CC---C
Q 017221 63 KVVNVNGINMHVA-E-------KGQGPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDA---PA---E 126 (375)
Q Consensus 63 ~~~~~~g~~l~~~-~-------~g~~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~---~~---~ 126 (375)
.+...||.+|.+. . .++.|+||++||..+.+. .|......|.++||.|+.++.||-|.=.. .. .
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~ 499 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL 499 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh
Confidence 3456789998752 1 234699999999877653 46666778899999999999999654321 11 1
Q ss_pred CccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 127 VPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 127 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
....+++|+++-+..+++.--.+++++.+.|.|.||+++..++.++|+.++++|...|..+.
T Consensus 500 ~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 500 KKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred cCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 12356777777777776653345679999999999999999999999999999999988764
No 95
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.60 E-value=2.5e-14 Score=130.19 Aligned_cols=115 Identities=21% Similarity=0.255 Sum_probs=93.6
Q ss_pred cccceeEEEECCeEEEeeecCCC-----------CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCC--
Q 017221 58 EDIQHKVVNVNGINMHVAEKGQG-----------PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAP-- 124 (375)
Q Consensus 58 ~~~~~~~~~~~g~~l~~~~~g~~-----------~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~-- 124 (375)
...+.++...++.+++|...+.+ |+||++||++++...|..+++.|.++||+|+++|+||||.|...
T Consensus 416 ~~vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~ 495 (792)
T TIGR03502 416 ENVPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDAN 495 (792)
T ss_pred cccceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccc
Confidence 33556778888988887765432 58999999999999999999999989999999999999999443
Q ss_pred --------CCCc-----------cccHhHHHHHHHHHHHHhc--------------CCCCcEEEEEeChHHHHHHHHHHh
Q 017221 125 --------AEVP-----------SYTCLHLVGDVIALLDAVA--------------ADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 125 --------~~~~-----------~~~~~~~~~d~~~~l~~l~--------------~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
.... ...+.+.+.|+..+...++ .+..+++++||||||+++..++..
T Consensus 496 ~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 496 ASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1101 1277899999999999887 224589999999999999999986
Q ss_pred C
Q 017221 172 R 172 (375)
Q Consensus 172 ~ 172 (375)
.
T Consensus 576 a 576 (792)
T TIGR03502 576 A 576 (792)
T ss_pred c
Confidence 3
No 96
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.58 E-value=1.9e-14 Score=108.58 Aligned_cols=89 Identities=20% Similarity=0.245 Sum_probs=60.1
Q ss_pred EEEEcCCCCCh-hhHHHHH-HHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 83 ILFIHGFPLLW-YSWRHQI-TALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 83 il~~hG~~~~~-~~~~~~~-~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
|+++||++++. ..|.+.. +.|... ++|-.+|+ ...+.+++...+.+.+... .+++++||||+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------~~P~~~~W~~~l~~~i~~~---~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------------DNPDLDEWVQALDQAIDAI---DEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------TS--HHHHHHHHHHCCHC----TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------------CCCCHHHHHHHHHHHHhhc---CCCeEEEEeCH
Confidence 68999998764 4566544 556665 78777665 1235666666666665543 23699999999
Q ss_pred HHHHHHHHH-HhCCCccceEEEEccCCC
Q 017221 161 GALIAWYLC-LFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 161 Gg~~a~~~a-~~~p~~v~~lil~~~~~~ 187 (375)
|+..+++++ ...+.+|.|++|++|+..
T Consensus 65 Gc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 65 GCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 999999999 777889999999998754
No 97
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=1.1e-13 Score=106.91 Aligned_cols=125 Identities=23% Similarity=0.348 Sum_probs=89.9
Q ss_pred eeEEEECCeEEEeee------cCCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCC----CCC-----
Q 017221 62 HKVVNVNGINMHVAE------KGQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDA----PAE----- 126 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~------~g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~----~~~----- 126 (375)
..+...+|.+|.-+- .++.|.||-.||.+++...|..+. .++..||.|+.+|.||.|.|+. ++.
T Consensus 59 vTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred EEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 445556777776321 244689999999999888776554 3456699999999999998843 111
Q ss_pred ----------CccccHhHHHHHHHHHHHHhc----CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 127 ----------VPSYTCLHLVGDVIALLDAVA----ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 127 ----------~~~~~~~~~~~d~~~~l~~l~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
...+-+.....|+..+++.+- ++.+++.+.|.|.||.+++.+++..| +|++++.+-|..+.
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d 212 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD 212 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc
Confidence 112333445566666666552 34669999999999999999999875 79999988887763
No 98
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.57 E-value=4.3e-13 Score=113.76 Aligned_cols=274 Identities=13% Similarity=0.064 Sum_probs=151.2
Q ss_pred CEEEEEcCCCCChhhH-HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 81 PLILFIHGFPLLWYSW-RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~-~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
|+||++..+.+..... +.+++.|.+ |+.|+..|+..-+..+... ...+++|+++-+.++++++|. +++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~---~v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGP---DIHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCC---CCcEEEEc
Confidence 7999999988765544 567888888 9999999999777554333 567899999999999988854 48999999
Q ss_pred hHHHHHHHHHHhC-----CCccceEEEEccCCCCCCCCCchh--------hhHHhhc-CC--ceEE--EeecCCcc-hHH
Q 017221 160 WGALIAWYLCLFR-----PDRVKALVNLSVVFNPRNPNMKPL--------QVFKAVY-GD--DYYI--CRFQEPGE-IEA 220 (375)
Q Consensus 160 ~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~--------~~~~~~~-~~--~~~~--~~~~~~~~-~~~ 220 (375)
+||..++.+++.+ |.+++++++++++.+......... +.+.... .. ..|. -+-..|+. ...
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~ 256 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLA 256 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHH
Confidence 9999977766665 667999999999888654211111 1111100 00 0000 00001111 111
Q ss_pred HHHhcCcHHH---HHHHHhhcCCCC-CCC-CCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccc
Q 017221 221 EFAQMGTETV---LKEFLTYRNPGP-LFL-PKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELN 295 (375)
Q Consensus 221 ~~~~~~~~~~---~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
.+...+.... ...++.....+. ... ....+++.+. ..-.+..+....+.+.+-+.+.... ..+.-.
T Consensus 257 ~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~-----d~~dlpge~y~~~v~~vf~~n~L~~-G~l~v~--- 327 (406)
T TIGR01849 257 GFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYL-----AVMDMTAEFYLQTIDVVFQQFLLPQ-GKFIVE--- 327 (406)
T ss_pred HHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhh-----hccCCcHHHHHHHHHHHHHhCCccC-CcEEEC---
Confidence 1211121111 111111111000 000 0000011000 0111222333333322222111111 011111
Q ss_pred hhhcccCcCCccc-ccEEEEecCCCcCCCCCCchhhhhcCccccccCCc-eeEEEecCCCCCCCcc---ChhHHHHHHHH
Q 017221 296 WELLAPWTGAQIK-VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLL-EEVIVMEGVGHFINEE---KPDEVNKHIYN 370 (375)
Q Consensus 296 ~~~~~~~~~~~~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e---~p~~~~~~i~~ 370 (375)
....++++|+ +|++.+.|++|.++|+.......+ +...++.. ++.+..+++||+-.+. -++++...|.+
T Consensus 328 ---G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~---l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~ 401 (406)
T TIGR01849 328 ---GKRVDPGAITRVALLTVEGENDDISGLGQTKAALR---LCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVRE 401 (406)
T ss_pred ---CEEecHHHCcccceEEEeccCCCcCCHHHhHHHHH---HhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHH
Confidence 1223344898 999999999999999998876422 22223433 3567777889997553 35889999999
Q ss_pred HHhhC
Q 017221 371 FFQKF 375 (375)
Q Consensus 371 fl~~~ 375 (375)
||.++
T Consensus 402 wl~~~ 406 (406)
T TIGR01849 402 FIRRN 406 (406)
T ss_pred HHHhC
Confidence 99875
No 99
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.57 E-value=8.4e-14 Score=111.92 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=73.5
Q ss_pred EEEeeecC--CCCEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 71 NMHVAEKG--QGPLILFIHGFPLLWY---SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 71 ~l~~~~~g--~~~~il~~hG~~~~~~---~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
.+.|...+ +...|||+.|.+.+.. ....+++.|.+.||.|+-+-++-. . ......++++-++|+.+++++
T Consensus 22 afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSS----y-~G~G~~SL~~D~~eI~~~v~y 96 (303)
T PF08538_consen 22 AFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSS----Y-SGWGTSSLDRDVEEIAQLVEY 96 (303)
T ss_dssp EEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGG----B-TTS-S--HHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCc----c-CCcCcchhhhHHHHHHHHHHH
Confidence 33444444 3458999999886443 456788888777999999987521 1 111234788888999988887
Q ss_pred hcCC------CCcEEEEEeChHHHHHHHHHHhCC-----CccceEEEEccCCCCCCCC
Q 017221 146 VAAD------QEKVFVVGHDWGALIAWYLCLFRP-----DRVKALVNLSVVFNPRNPN 192 (375)
Q Consensus 146 l~~~------~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~~~~~ 192 (375)
+... .++|+|+|||.|+.-+++|+.+.. ..|+|+|+-+|..+.+...
T Consensus 97 lr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 97 LRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp HHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred HHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 7432 458999999999999999998863 5699999999988766543
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=9.1e-14 Score=104.80 Aligned_cols=116 Identities=20% Similarity=0.300 Sum_probs=82.2
Q ss_pred EECCeEEEeeec---CCCC-EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC-CccccHhHHHH-HH
Q 017221 66 NVNGINMHVAEK---GQGP-LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE-VPSYTCLHLVG-DV 139 (375)
Q Consensus 66 ~~~g~~l~~~~~---g~~~-~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~-~~~~~~~~~~~-d~ 139 (375)
-.||+.+..... ++.+ .++.-.+.+.....|+.++...+++||.|.++|+||.|.|+.... ...+.+.|++. |+
T Consensus 12 ~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~ 91 (281)
T COG4757 12 APDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDF 91 (281)
T ss_pred cCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcch
Confidence 346777764444 3334 566566677777788999999999999999999999999986552 13456666654 77
Q ss_pred HHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEc
Q 017221 140 IALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLS 183 (375)
Q Consensus 140 ~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~ 183 (375)
.+.++.++. ...+.+.+|||+||.+.-.+.. ++ ++.+....+
T Consensus 92 ~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG 135 (281)
T COG4757 92 PAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFG 135 (281)
T ss_pred HHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEec
Confidence 777777765 4558999999999998766554 34 455554444
No 101
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.56 E-value=1.7e-13 Score=110.89 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=84.4
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
++|+++|+.+|+...|..+++.|...++.|+.++.+|.+.... ...+++++++...+.+.....+. ++.|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~g-p~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEG-PYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSS-SEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCC-CeeehccCc
Confidence 4799999999999999999999987458999999999983222 35689999999988888766553 999999999
Q ss_pred HHHHHHHHHHhC---CCccceEEEEccCCC
Q 017221 161 GALIAWYLCLFR---PDRVKALVNLSVVFN 187 (375)
Q Consensus 161 Gg~~a~~~a~~~---p~~v~~lil~~~~~~ 187 (375)
||.+|.++|.+- ...+..++++++...
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999999774 345999999996544
No 102
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.56 E-value=2.5e-14 Score=92.48 Aligned_cols=75 Identities=21% Similarity=0.303 Sum_probs=64.3
Q ss_pred CeEEEeeecCC----CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHH
Q 017221 69 GINMHVAEKGQ----GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLD 144 (375)
Q Consensus 69 g~~l~~~~~g~----~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~ 144 (375)
|.+|++..+.+ +.+|+++||++.++..|..+++.|+++||.|+++|+||||.|+.... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 56777776643 56899999999999999999999999999999999999999986543 45689999999998864
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.55 E-value=5.7e-14 Score=105.58 Aligned_cols=198 Identities=22% Similarity=0.344 Sum_probs=138.3
Q ss_pred eeEEEECCeEEEeeecCCCC-EEEEEcCCCC-ChhhHHHHHHHHHhCCcEEEEeCCC-CCCCCCC-CC-----CCccccH
Q 017221 62 HKVVNVNGINMHVAEKGQGP-LILFIHGFPL-LWYSWRHQITALASLGYRAVAPDLR-GYGDTDA-PA-----EVPSYTC 132 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g~~~-~il~~hG~~~-~~~~~~~~~~~L~~~g~~v~~~d~~-G~G~S~~-~~-----~~~~~~~ 132 (375)
.+..+++|.+-++....+.+ .||++.-.-| ....-+..++.++..||.|++||+- |--.|.. .. -....+.
T Consensus 20 g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~ 99 (242)
T KOG3043|consen 20 GREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSP 99 (242)
T ss_pred CceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCc
Confidence 45677888887777665544 6666665444 4444788899999999999999975 3111211 11 0123455
Q ss_pred hHHHHHHHHHHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEE
Q 017221 133 LHLVGDVIALLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYIC 210 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (375)
+-...++..+++.++.. .++|.++|++|||-++..+....| .+.+.+..-|.....
T Consensus 100 ~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~--------------------- 157 (242)
T KOG3043|consen 100 PKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS--------------------- 157 (242)
T ss_pred ccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh---------------------
Confidence 66667778888777643 468999999999999999999887 688888777755321
Q ss_pred eecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeee
Q 017221 211 RFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYR 290 (375)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (375)
++..
T Consensus 158 ---------------------------------------------------------~D~~------------------- 161 (242)
T KOG3043|consen 158 ---------------------------------------------------------ADIA------------------- 161 (242)
T ss_pred ---------------------------------------------------------hHHh-------------------
Confidence 1110
Q ss_pred ccccchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCc-eeEEEecCCCCCCCc-----cCh---
Q 017221 291 NIELNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLL-EEVIVMEGVGHFINE-----EKP--- 361 (375)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~-----e~p--- 361 (375)
++++|++++.|+.|.++|+.....+-+. + +..+.. .++.+|+|.+|.+.. +.|
T Consensus 162 ---------------~vk~Pilfl~ae~D~~~p~~~v~~~ee~--l-k~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~ 223 (242)
T KOG3043|consen 162 ---------------NVKAPILFLFAELDEDVPPKDVKAWEEK--L-KENPAVGSQVKTFSGVGHGFVARRANISSPEDK 223 (242)
T ss_pred ---------------cCCCCEEEEeecccccCCHHHHHHHHHH--H-hcCcccceeEEEcCCccchhhhhccCCCChhHH
Confidence 7899999999999999999888775432 2 222222 279999999998763 333
Q ss_pred ---hHHHHHHHHHHhhC
Q 017221 362 ---DEVNKHIYNFFQKF 375 (375)
Q Consensus 362 ---~~~~~~i~~fl~~~ 375 (375)
|+..+.+.+|+++|
T Consensus 224 ~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 224 KAAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 56777788888764
No 104
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.54 E-value=2.7e-13 Score=114.71 Aligned_cols=302 Identities=17% Similarity=0.176 Sum_probs=166.8
Q ss_pred eeEEEECCeEEEeee---c-CCCCEEEEEcCCCCChhhHH------HHHHHHHhCCcEEEEeCCCCCCCCCCCC------
Q 017221 62 HKVVNVNGINMHVAE---K-GQGPLILFIHGFPLLWYSWR------HQITALASLGYRAVAPDLRGYGDTDAPA------ 125 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~---~-g~~~~il~~hG~~~~~~~~~------~~~~~L~~~g~~v~~~d~~G~G~S~~~~------ 125 (375)
+...+.||+.+.... . +++|+|++.||.-+++..|- .++-.|+++||.|+.-+.||...|....
T Consensus 51 h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~ 130 (403)
T KOG2624|consen 51 HEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSS 130 (403)
T ss_pred EEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcC
Confidence 455667888654322 1 55799999999999999883 3555688999999999999987775321
Q ss_pred --CCccccHhHHHH-HHHHHHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCC---ccceEEEEccCCCCCCCCCchhh
Q 017221 126 --EVPSYTCLHLVG-DVIALLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPD---RVKALVNLSVVFNPRNPNMKPLQ 197 (375)
Q Consensus 126 --~~~~~~~~~~~~-d~~~~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~ 197 (375)
.+..+++.+++. |+-+.+++.-.. .++++.+|||.|+.....++...|+ +|+..++++|+....... ....
T Consensus 131 ~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~-~~~~ 209 (403)
T KOG2624|consen 131 DKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIK-SLLN 209 (403)
T ss_pred CcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccc-cHHH
Confidence 133456666543 566666554321 2499999999999999999998876 799999999998654211 1111
Q ss_pred h-----------HHhhcCCceEEEeecCCcchHHHHHh-c-CcHHHHHHHHhhcC-CCCCCCCCCCCCCCCCCCcccCCC
Q 017221 198 V-----------FKAVYGDDYYICRFQEPGEIEAEFAQ-M-GTETVLKEFLTYRN-PGPLFLPKGKGFGHPPDAQIALPS 263 (375)
Q Consensus 198 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (375)
. +...++...+.............+-. . ....+...++.... .............. ....+.
T Consensus 210 ~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~----~~h~pa 285 (403)
T KOG2624|consen 210 KFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVY----LAHLPA 285 (403)
T ss_pred HhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchh----hccCCC
Confidence 1 11111111111000000000000000 0 11111111111111 11100000000001 122334
Q ss_pred CCCHHHHHHHHHHhhhcCccceeeeeeccc--cchhhcccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccC
Q 017221 264 WLSEEDVKYYASKYEKAGFTGGINYYRNIE--LNWELLAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVP 341 (375)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 341 (375)
..+.+.+..+.+......+...-....... ..........+.++++|+.+.+|++|.++.++.....+ ...+
T Consensus 286 gtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~------~~~~ 359 (403)
T KOG2624|consen 286 GTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL------LVLP 359 (403)
T ss_pred CccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH------Hhcc
Confidence 456667777776655443322110000000 00111112233488999999999999999998887633 3344
Q ss_pred Cc--eeEEEecCCCCCCCc---cChhHHHHHHHHHHhh
Q 017221 342 LL--EEVIVMEGVGHFINE---EKPDEVNKHIYNFFQK 374 (375)
Q Consensus 342 ~~--~~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 374 (375)
++ +..+.+++-.|+-++ +.++++.+.|.+.+++
T Consensus 360 ~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 360 NSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred cccccccccCCCccceeeeeccCcHHHHHHHHHHHHHh
Confidence 43 123337888997533 5689999999988874
No 105
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.52 E-value=4.6e-13 Score=105.71 Aligned_cols=108 Identities=30% Similarity=0.427 Sum_probs=77.5
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh-----cCCCCc
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV-----AADQEK 152 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l-----~~~~~~ 152 (375)
|+-|++||+||+......|..+.++++++||.|+.+|+...+...... ...+..+.++.+.+-++.. ..+-.+
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhccccccccccc
Confidence 456999999999988888999999999999999999966544321111 1222333333322212111 123348
Q ss_pred EEEEEeChHHHHHHHHHHhC-----CCccceEEEEccCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFR-----PDRVKALVNLSVVFN 187 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~ 187 (375)
+.+.|||-||-+|..++..+ +.+++++|+++|.-.
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 99999999999999999987 558999999999763
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.52 E-value=1.5e-12 Score=92.19 Aligned_cols=111 Identities=20% Similarity=0.214 Sum_probs=79.6
Q ss_pred ecCCCC-EEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCC----CCCCCCccccHhHHHHHHHHHHHHhcC
Q 017221 76 EKGQGP-LILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDT----DAPAEVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 76 ~~g~~~-~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S----~~~~~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
..|+.| +||+.||.|++.+ .....+..|+.+|+.|..++++..-.. .+++.....-...+...+.++-+.+..
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~ 88 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE 88 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC
Confidence 334444 7899999886544 567888999999999999998764222 112221223334556666666666655
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
. +.++-|+||||-++.+.+......|+++++++=++.+
T Consensus 89 g--pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 89 G--PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred C--ceeeccccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 5 8999999999999999998866669999999865554
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.50 E-value=2.5e-12 Score=98.12 Aligned_cols=88 Identities=24% Similarity=0.351 Sum_probs=67.8
Q ss_pred EEEEcCCCCChhhHH--HHHHHHHhCC--cEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 83 ILFIHGFPLLWYSWR--HQITALASLG--YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 83 il~~hG~~~~~~~~~--~~~~~L~~~g--~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
|+++||+.++..... .+.+.+.+.+ ..+.++|++ .+..+..+.+.++++....+ .+.|+|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~--~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPE--NVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCC--CeEEEEE
Confidence 799999998877654 3445566654 456666655 35666777888888888776 7999999
Q ss_pred ChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 159 DWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
||||+.|..+|.+++ +++ |+++|+..+
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 999999999999986 555 889998865
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.49 E-value=2.7e-13 Score=110.66 Aligned_cols=109 Identities=22% Similarity=0.292 Sum_probs=94.3
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhC---CcEEEEeCCCCCCCCCCC----CCCccccHhHHHHHHHHHHHHhcC----
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASL---GYRAVAPDLRGYGDTDAP----AEVPSYTCLHLVGDVIALLDAVAA---- 148 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~---g~~v~~~d~~G~G~S~~~----~~~~~~~~~~~~~d~~~~l~~l~~---- 148 (375)
++.|+|++|++|-.+.|..+.+.|.+. .+.|+++.+.||-.++.. .+...++++++++-..++++.+-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999988744 699999999999877665 133678999999998888888765
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCC---CccceEEEEccCCCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRP---DRVKALVNLSVVFNP 188 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~ 188 (375)
...+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 4568999999999999999999999 789999999998763
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.45 E-value=7e-13 Score=105.84 Aligned_cols=97 Identities=24% Similarity=0.223 Sum_probs=65.6
Q ss_pred EEEEcCCC---CChhhHHHHHHHHHh-CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh-------cCCCC
Q 017221 83 ILFIHGFP---LLWYSWRHQITALAS-LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV-------AADQE 151 (375)
Q Consensus 83 il~~hG~~---~~~~~~~~~~~~L~~-~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l-------~~~~~ 151 (375)
||++||++ ++......++..+++ .|+.|+.+|+|=.. ...+.+..+|+.+.++.+ +.+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p---------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP---------EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT---------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc---------cccccccccccccceeeecccccccccccc
Confidence 78999987 444555667777775 79999999999322 223444555555444443 34456
Q ss_pred cEEEEEeChHHHHHHHHHHhCCC----ccceEEEEccCCCC
Q 017221 152 KVFVVGHDWGALIAWYLCLFRPD----RVKALVNLSVVFNP 188 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~~ 188 (375)
+++++|+|.||.+++.++.+..+ .++++++++|....
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999986533 38999999997644
No 110
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.44 E-value=7.7e-13 Score=109.40 Aligned_cols=253 Identities=12% Similarity=0.051 Sum_probs=138.0
Q ss_pred CCEEEEEcCCCCChhhH-----HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEE
Q 017221 80 GPLILFIHGFPLLWYSW-----RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVF 154 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~-----~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 154 (375)
+++++++|.+-.....| ..++..|.++|..|+.+++++-..+....+...|-.+.+.+.+..+.+..+.+ +|.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~--~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQK--DIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcc--ccc
Confidence 56899999876544433 45788899999999999999877776533222333333444455555555666 999
Q ss_pred EEEeChHHHHHHHHHHhCCCc-cceEEEEccCCCCCCCCC-chh--h-hHHhhcCCceEEEeecCCc-chHHHHHhcCcH
Q 017221 155 VVGHDWGALIAWYLCLFRPDR-VKALVNLSVVFNPRNPNM-KPL--Q-VFKAVYGDDYYICRFQEPG-EIEAEFAQMGTE 228 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (375)
++|+|.||.++..+++.++.+ |++++++.++.+...... ..+ + .+... ........ ..++ .....|......
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~-~~~i~~~g-~lpg~~ma~~F~mLrpn 262 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEAL-DADIVQKG-ILPGWYMAIVFFLLRPN 262 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHH-Hhhhhhcc-CCChHHHHHHHHhcCcc
Confidence 999999999999999999888 999999987776433211 000 0 01110 11111111 1111 111222222211
Q ss_pred -----HHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCc
Q 017221 229 -----TVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWT 303 (375)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (375)
.++..++....+-+ .. +.. .......++......+.+.+-..+.... ..+.-. ....+
T Consensus 263 dliw~~fV~nyl~ge~pl~----fd-lly-----Wn~dst~~~~~~~~~~Lrn~y~~N~l~~-g~~~v~------G~~Vd 325 (445)
T COG3243 263 DLIWNYFVNNYLDGEQPLP----FD-LLY-----WNADSTRLPGAAHSEYLRNFYLENRLIR-GGLEVS------GTMVD 325 (445)
T ss_pred ccchHHHHHHhcCCCCCCc----hh-HHH-----hhCCCccCchHHHHHHHHHHHHhChhhc-cceEEC------CEEec
Confidence 22222222111111 00 000 0011223444444455543332222111 111111 12233
Q ss_pred CCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccC
Q 017221 304 GAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEK 360 (375)
Q Consensus 304 ~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 360 (375)
+.+|+||++++.|++|.++|...... .++..++.++++.. ++||....-+
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~------g~~l~~g~~~f~l~-~sGHIa~vVN 375 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYL------GARLLGGEVTFVLS-RSGHIAGVVN 375 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHH------HHHhcCCceEEEEe-cCceEEEEeC
Confidence 44999999999999999999887765 55666664366655 5699875443
No 111
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.38 E-value=4.1e-12 Score=96.92 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=75.6
Q ss_pred ECCeEEEeeecCC-------CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCC-CCCCCCCCCccccHhHHHHH
Q 017221 67 VNGINMHVAEKGQ-------GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGY-GDTDAPAEVPSYTCLHLVGD 138 (375)
Q Consensus 67 ~~g~~l~~~~~g~-------~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~-G~S~~~~~~~~~~~~~~~~d 138 (375)
-+|.+|++++.-+ .++||+.+|++.....|..++..|+..||+|+.+|.-.| |.|++.- ..++......+
T Consensus 10 ~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~g~~s 87 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSIGKAS 87 (294)
T ss_dssp TTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHHHHHH
T ss_pred CCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHHhHHH
Confidence 3688898877643 479999999999999999999999999999999999877 8888765 57888888889
Q ss_pred HHHHHHHhcCC-CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 139 VIALLDAVAAD-QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 139 ~~~~l~~l~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+..+++.+... ..++.++.-|+.|-+|...|.+- .+.-+|...+...
T Consensus 88 L~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVn 135 (294)
T PF02273_consen 88 LLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVN 135 (294)
T ss_dssp HHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-
T ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeee
Confidence 88888887532 34899999999999999999853 4777777776554
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.37 E-value=1.9e-11 Score=107.64 Aligned_cols=127 Identities=16% Similarity=0.109 Sum_probs=87.8
Q ss_pred eeEEEEC----CeEEEeeecC------CCCEEEEEcCCCCChhhHHHHHH------------------HHHhCCcEEEEe
Q 017221 62 HKVVNVN----GINMHVAEKG------QGPLILFIHGFPLLWYSWRHQIT------------------ALASLGYRAVAP 113 (375)
Q Consensus 62 ~~~~~~~----g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~~------------------~L~~~g~~v~~~ 113 (375)
..+++++ +..++|+-.. +.|+||+++|++|.+..+..+.+ .+.+. .+++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEE
Confidence 4466664 3567665432 26999999999988865533221 12233 789999
Q ss_pred CCC-CCCCCCCCCCCccccHhHHHHHHHHHHHHhc-----CCCCcEEEEEeChHHHHHHHHHHhC----------CCccc
Q 017221 114 DLR-GYGDTDAPAEVPSYTCLHLVGDVIALLDAVA-----ADQEKVFVVGHDWGALIAWYLCLFR----------PDRVK 177 (375)
Q Consensus 114 d~~-G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~-----~~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~ 177 (375)
|.| |+|.|.........+.++.++|+.++++..- ....+++|+|||+||.++..+|.+. +-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 975 8898876442234566788999999888652 2235899999999999998888763 11478
Q ss_pred eEEEEccCCCCC
Q 017221 178 ALVNLSVVFNPR 189 (375)
Q Consensus 178 ~lil~~~~~~~~ 189 (375)
|+++.+|...+.
T Consensus 208 Gi~IGNg~~dp~ 219 (462)
T PTZ00472 208 GLAVGNGLTDPY 219 (462)
T ss_pred EEEEeccccChh
Confidence 999888877654
No 113
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.37 E-value=9.4e-13 Score=103.89 Aligned_cols=53 Identities=25% Similarity=0.273 Sum_probs=37.7
Q ss_pred HHHHHHHHHHh-cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 136 VGDVIALLDAV-AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 136 ~~d~~~~l~~l-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
.++..++++.. .++.++|.|+|.|.||.+|+.+|..+| .|+++|.++|+....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEe
Confidence 33444444443 344569999999999999999999998 799999999887654
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.36 E-value=7.9e-11 Score=109.72 Aligned_cols=87 Identities=10% Similarity=0.096 Sum_probs=68.7
Q ss_pred HHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC------------------CCcEEEEEeC
Q 017221 98 HQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD------------------QEKVFVVGHD 159 (375)
Q Consensus 98 ~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~------------------~~~~~l~G~S 159 (375)
.+.+.+..+||.|+..|.||.|.|++... .. ..+..+|..++++.+..+ ..+|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~-~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT--TG-DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc--cC-CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 34577889999999999999999987542 11 144566777777776511 3599999999
Q ss_pred hHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 160 WGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+||.+++.+|...|..++++|..++...
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCCc
Confidence 9999999999998889999998877643
No 115
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=4e-11 Score=111.29 Aligned_cols=227 Identities=17% Similarity=0.202 Sum_probs=147.5
Q ss_pred cccceeEEEECCeEEEeeecCC--------CCEEEEEcCCCCChh-------hHHHHHHHHHhCCcEEEEeCCCCCCCCC
Q 017221 58 EDIQHKVVNVNGINMHVAEKGQ--------GPLILFIHGFPLLWY-------SWRHQITALASLGYRAVAPDLRGYGDTD 122 (375)
Q Consensus 58 ~~~~~~~~~~~g~~l~~~~~g~--------~~~il~~hG~~~~~~-------~~~~~~~~L~~~g~~v~~~d~~G~G~S~ 122 (375)
...+...+..+|...++...-+ -|.++.+||++++.. .|... .....|+.|+.+|.||.|...
T Consensus 496 p~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G 573 (755)
T KOG2100|consen 496 PIVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYG 573 (755)
T ss_pred CcceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcc
Confidence 3445666777999998765432 378999999987322 23322 355679999999999987654
Q ss_pred CC------CCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCc-cceEEEEccCCCCCCCCCch
Q 017221 123 AP------AEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDR-VKALVNLSVVFNPRNPNMKP 195 (375)
Q Consensus 123 ~~------~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~ 195 (375)
.. ........+|+..-+..+++...++.+++.+.|+|.||++++..+..+|+. +++.+.++|.....-..
T Consensus 574 ~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yd--- 650 (755)
T KOG2100|consen 574 WDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYD--- 650 (755)
T ss_pred hhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeec---
Confidence 32 122345677777777778777777778999999999999999999999855 55559999887532100
Q ss_pred hhhHHhhcCCceEEEeecCCcchHHHHHhcCcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHH
Q 017221 196 LQVFKAVYGDDYYICRFQEPGEIEAEFAQMGTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYAS 275 (375)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (375)
.. ...+++.. ..+....|.+
T Consensus 651 ----------s~----------------------~terymg~----------------------------p~~~~~~y~e 670 (755)
T KOG2100|consen 651 ----------ST----------------------YTERYMGL----------------------------PSENDKGYEE 670 (755)
T ss_pred ----------cc----------------------ccHhhcCC----------------------------Cccccchhhh
Confidence 00 00000000 0000000111
Q ss_pred HhhhcCccceeeeeeccccchhhcccCcCCcccccE-EEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCC
Q 017221 276 KYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPV-KFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGH 354 (375)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 354 (375)
.... ... ..++.|. |++||+.|..++.+.+..+++ .+..+.-.. ++.++|+.+|
T Consensus 671 ~~~~----------------~~~------~~~~~~~~LliHGt~DdnVh~q~s~~~~~--aL~~~gv~~-~~~vypde~H 725 (755)
T KOG2100|consen 671 SSVS----------------SPA------NNIKTPKLLLIHGTEDDNVHFQQSAILIK--ALQNAGVPF-RLLVYPDENH 725 (755)
T ss_pred cccc----------------chh------hhhccCCEEEEEcCCcCCcCHHHHHHHHH--HHHHCCCce-EEEEeCCCCc
Confidence 0000 000 0455555 999999999999888777663 355555556 9999999999
Q ss_pred CCCccCh-hHHHHHHHHHHhh
Q 017221 355 FINEEKP-DEVNKHIYNFFQK 374 (375)
Q Consensus 355 ~~~~e~p-~~~~~~i~~fl~~ 374 (375)
.+..-.. ..+...+..|++.
T Consensus 726 ~is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 726 GISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred ccccccchHHHHHHHHHHHHH
Confidence 9966443 6777888888763
No 116
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.35 E-value=1.2e-10 Score=96.85 Aligned_cols=109 Identities=18% Similarity=0.156 Sum_probs=80.7
Q ss_pred CCEEEEEcCCC---C--ChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH----hcCC
Q 017221 80 GPLILFIHGFP---L--LWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA----VAAD 149 (375)
Q Consensus 80 ~~~il~~hG~~---~--~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~----l~~~ 149 (375)
.|.||++||+| + +...|+.+...++++ +..|+.+|+|=--+.. ....++|-.+.+..+.++ .+.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCCC
Confidence 58999999987 2 356788888888554 8899999999333222 233566666666666653 3556
Q ss_pred CCcEEEEEeChHHHHHHHHHHhC------CCccceEEEEccCCCCCCCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFR------PDRVKALVNLSVVFNPRNPNM 193 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~~~~~~~ 193 (375)
.++++|+|-|.||.+|..+|.+. +-+++|.|++.|.........
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~ 214 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTE 214 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCC
Confidence 77999999999999999888763 357999999999988665543
No 117
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.34 E-value=1.3e-10 Score=98.55 Aligned_cols=105 Identities=21% Similarity=0.196 Sum_probs=71.5
Q ss_pred CCEEEEEcCCC---CChhhHHHHHH-HHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHH---HHhcCCCCc
Q 017221 80 GPLILFIHGFP---LLWYSWRHQIT-ALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALL---DAVAADQEK 152 (375)
Q Consensus 80 ~~~il~~hG~~---~~~~~~~~~~~-~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l---~~l~~~~~~ 152 (375)
.|+||++||++ ++.......+. .+...|+.|+.+|+|-.-+-..+ ..++|..+-+..+. ..++.++++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p-----~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP-----AALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC-----chHHHHHHHHHHHHhhhHhhCCCccc
Confidence 69999999987 45555534444 45567999999999944333222 23333222222222 334566779
Q ss_pred EEEEEeChHHHHHHHHHHhCCC----ccceEEEEccCCCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFRPD----RVKALVNLSVVFNPR 189 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~~~ 189 (375)
+.++|+|.||.+++.++..-.+ ...+.+++.|.....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 9999999999999999987543 478889999887654
No 118
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.34 E-value=4.5e-11 Score=86.89 Aligned_cols=92 Identities=12% Similarity=0.071 Sum_probs=63.8
Q ss_pred CEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 81 PLILFIHGFPLLWY-SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 81 ~~il~~hG~~~~~~-~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
+.+|++||+.++.. .|+...+.= . -.+-.+++. +......+++++.+.+.+... +++++|++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~--l-~~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESA--L-PNARRVEQD---------DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhh--C-ccchhcccC---------CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEec
Confidence 57899999987653 555443321 1 112222222 113456777777777777665 2369999999
Q ss_pred hHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 160 WGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+|+.++++++.+....|.|+++++|+..
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 9999999999998779999999998764
No 119
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.33 E-value=1.1e-11 Score=106.12 Aligned_cols=110 Identities=25% Similarity=0.298 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCC-CCC-CC--------------------Cccc-----
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDT-DAP-AE--------------------VPSY----- 130 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S-~~~-~~--------------------~~~~----- 130 (375)
++-|+|||-||++++...|..++..|+++||-|+++|+|..-.+ ... .+ ....
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34599999999999999999999999999999999999953111 000 00 0000
Q ss_pred ------cHhHHHHHHHHHHHHhc------------------------CCCCcEEEEEeChHHHHHHHHHHhCCCccceEE
Q 017221 131 ------TCLHLVGDVIALLDAVA------------------------ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALV 180 (375)
Q Consensus 131 ------~~~~~~~d~~~~l~~l~------------------------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~li 180 (375)
-++.-+.|+..+++.+. ++-.++.++|||+||..++..+.+. .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 01112334444443331 0123799999999999999988886 6799999
Q ss_pred EEccCCCC
Q 017221 181 NLSVVFNP 188 (375)
Q Consensus 181 l~~~~~~~ 188 (375)
+++|...+
T Consensus 257 ~LD~W~~P 264 (379)
T PF03403_consen 257 LLDPWMFP 264 (379)
T ss_dssp EES---TT
T ss_pred EeCCcccC
Confidence 99986543
No 120
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.33 E-value=3.4e-11 Score=93.09 Aligned_cols=110 Identities=26% Similarity=0.348 Sum_probs=77.7
Q ss_pred cCCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC-----CCC
Q 017221 77 KGQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA-----DQE 151 (375)
Q Consensus 77 ~g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~-----~~~ 151 (375)
.|.-|+|+|+||+.-....|..+..+++++||-|+++++-..-.-+... +..+....++++..-+.++-. +-.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~--Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~ 120 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQD--EIKSAASVINWLPEGLQHVLPENVEANLS 120 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchH--HHHHHHHHHHHHHhhhhhhCCCCcccccc
Confidence 4556999999999998899999999999999999999987421111110 112233333333333333311 124
Q ss_pred cEEEEEeChHHHHHHHHHHhCC--CccceEEEEccCCCC
Q 017221 152 KVFVVGHDWGALIAWYLCLFRP--DRVKALVNLSVVFNP 188 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~ 188 (375)
++.++|||.||..|..+|..+. -++.++|.++|....
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 8999999999999999999873 258999999987654
No 121
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.33 E-value=1.1e-10 Score=118.09 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
+++++++++||++++...|..+.+.|... +.|+++|.+|+|.+.. ..++++++++++.+.++.+... .+++++|
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~-~p~~l~G 1139 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPH-GPYHLLG 1139 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCC-CCEEEEE
Confidence 45688999999999999999999999765 9999999999986532 3579999999999999876543 3899999
Q ss_pred eChHHHHHHHHHHh---CCCccceEEEEccCC
Q 017221 158 HDWGALIAWYLCLF---RPDRVKALVNLSVVF 186 (375)
Q Consensus 158 ~S~Gg~~a~~~a~~---~p~~v~~lil~~~~~ 186 (375)
||+||.+|.++|.+ .++++..++++++..
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999999986 578899999998643
No 122
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.32 E-value=3.8e-10 Score=92.48 Aligned_cols=240 Identities=14% Similarity=0.106 Sum_probs=131.4
Q ss_pred CCEEEEEcCCCCChhhHHH-H-HHHHHhCCcEEEEeCCCCCCCCCCCCCC--ccccHhH-------HHHHHHHHHHHhcC
Q 017221 80 GPLILFIHGFPLLWYSWRH-Q-ITALASLGYRAVAPDLRGYGDTDAPAEV--PSYTCLH-------LVGDVIALLDAVAA 148 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~-~-~~~L~~~g~~v~~~d~~G~G~S~~~~~~--~~~~~~~-------~~~d~~~~l~~l~~ 148 (375)
+|.+|.++|.|.+....+. + +..|.++|+..+.+..|-||.-.+.... ...+..| .+.+...++..+..
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 7889999999986654433 3 6778888999999999999976543310 1112222 22333334433322
Q ss_pred C-CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHh-cC
Q 017221 149 D-QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQ-MG 226 (375)
Q Consensus 149 ~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 226 (375)
+ ..++.+.|.||||.+|...|+.+|..+..+-.+++......- ..-.+.. ..
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vF--------------------------t~Gvls~~i~ 225 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVF--------------------------TEGVLSNSIN 225 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcch--------------------------hhhhhhcCCC
Confidence 2 339999999999999999999999877666555543321100 0000000 01
Q ss_pred cHHHHHHHHhhcCCC--CCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcC
Q 017221 227 TETVLKEFLTYRNPG--PLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTG 304 (375)
Q Consensus 227 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (375)
+..+.+. +...... ............. ..........+.+......+..... .. ....+
T Consensus 226 W~~L~~q-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ea~~~m~~~md~~T~------l~------nf~~P--- 286 (348)
T PF09752_consen 226 WDALEKQ-FEDTVYEEEISDIPAQNKSLPL---DSMEERRRDREALRFMRGVMDSFTH------LT------NFPVP--- 286 (348)
T ss_pred HHHHHHH-hcccchhhhhcccccCcccccc---hhhccccchHHHHHHHHHHHHhhcc------cc------ccCCC---
Confidence 1111111 0000000 0000000000000 0001111222332222222111100 00 01111
Q ss_pred CcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCC-CccChhHHHHHHHHHHh
Q 017221 305 AQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFI-NEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 305 ~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 373 (375)
.-.-.+.++.+++|..+|...... +.+..|++ ++..++| ||.- ++-+.+.+.+.|.+-++
T Consensus 287 -~dp~~ii~V~A~~DaYVPr~~v~~------Lq~~WPGs-EvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 287 -VDPSAIIFVAAKNDAYVPRHGVLS------LQEIWPGS-EVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred -CCCCcEEEEEecCceEechhhcch------HHHhCCCC-eEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 223458999999999999877765 88999999 9999988 9986 77888999999988765
No 123
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.32 E-value=5.7e-11 Score=88.58 Aligned_cols=100 Identities=23% Similarity=0.203 Sum_probs=75.1
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEEEEEeC
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVFVVGHD 159 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~l~G~S 159 (375)
.+||+-|=||-...=..+++.|+++|+.|+.+|-+-+=.+. .+.++.+.|+.+++++.... .++++|+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-------RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh-------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 56777876664444456889999999999999976444432 35667777887777665432 3499999999
Q ss_pred hHHHHHHHHHHhCCC----ccceEEEEccCCCC
Q 017221 160 WGALIAWYLCLFRPD----RVKALVNLSVVFNP 188 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~----~v~~lil~~~~~~~ 188 (375)
+|+-+.-....+.|. +|..+++++|....
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 999888888877764 69999999987653
No 124
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.31 E-value=2.5e-10 Score=89.31 Aligned_cols=109 Identities=21% Similarity=0.211 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCCCChhhHHHH--HHHHHhC-CcEEEEeCCCCCCCC----CC--CC-CCccccHhHHHHHHHHHHHHhcC
Q 017221 79 QGPLILFIHGFPLLWYSWRHQ--ITALASL-GYRAVAPDLRGYGDT----DA--PA-EVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~--~~~L~~~-g~~v~~~d~~G~G~S----~~--~~-~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
+.|.||++||.+++...+... +..|+++ ||-|+.++....... .. .. .....+...++..+.++.+...+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 358999999999998876542 2456654 899999986421110 00 00 00111233344445555566677
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+..+|++.|+|.||+++..++..+|+.+.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 888999999999999999999999999999988887654
No 125
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.29 E-value=3.2e-10 Score=85.76 Aligned_cols=60 Identities=18% Similarity=0.386 Sum_probs=47.3
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccCh--hHHHHHHHHHHh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKP--DEVNKHIYNFFQ 373 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~ 373 (375)
.+++|.|.|.|+.|.++|.+.+.. +.+.++++ .+..-+| ||++.-..+ +.+.+.|..+++
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~------L~~~~~~a-~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQ------LAESFKDA-TVLEHPG-GHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCCeeEEecccceeecchHHHH------HHHhcCCC-eEEecCC-CccCCCchHHHHHHHHHHHHHHH
Confidence 789999999999999999987766 77888998 7777776 999976654 455555555544
No 126
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=1.5e-10 Score=100.29 Aligned_cols=211 Identities=18% Similarity=0.167 Sum_probs=137.4
Q ss_pred CCEEEEEcCCCCChhh---H--HH--HHHHHHhCCcEEEEeCCCCCCCCCC------CCCCccccHhHHHHHHHHHHHHh
Q 017221 80 GPLILFIHGFPLLWYS---W--RH--QITALASLGYRAVAPDLRGYGDTDA------PAEVPSYTCLHLVGDVIALLDAV 146 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~---~--~~--~~~~L~~~g~~v~~~d~~G~G~S~~------~~~~~~~~~~~~~~d~~~~l~~l 146 (375)
-|+++++-|+++-... | -. -...|++.||.|+++|.||.-.... .........+|+++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 4899999999853322 2 11 2356888999999999998643321 11223457889999999999888
Q ss_pred c-CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCCCCchhhhHHhhcCCceEEEeecCCcchHHHHHhc
Q 017221 147 A-ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNPNMKPLQVFKAVYGDDYYICRFQEPGEIEAEFAQM 225 (375)
Q Consensus 147 ~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
| ++.+++.+-|+|+||+++++...++|+-++..|.-+|...-..-
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y---------------------------------- 767 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY---------------------------------- 767 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee----------------------------------
Confidence 5 44559999999999999999999999988887766554421100
Q ss_pred CcHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCC
Q 017221 226 GTETVLKEFLTYRNPGPLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGA 305 (375)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (375)
.....++++.. +...........+......+.
T Consensus 768 -DTgYTERYMg~--------------------P~~nE~gY~agSV~~~Veklp--------------------------- 799 (867)
T KOG2281|consen 768 -DTGYTERYMGY--------------------PDNNEHGYGAGSVAGHVEKLP--------------------------- 799 (867)
T ss_pred -cccchhhhcCC--------------------CccchhcccchhHHHHHhhCC---------------------------
Confidence 00011111111 000000011111111111110
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCC-CccChhHHHHHHHHHHhhC
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFI-NEEKPDEVNKHIYNFFQKF 375 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 375 (375)
.-.-..+++||--|..|........+.. +.+..+.- ++.+||+-.|.+ ..|...-.-..+..||+++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~--lvkagKpy-eL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSA--LVKAGKPY-ELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHH--HHhCCCce-EEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 2234589999999999988777666533 66666776 999999999998 6677777888899999874
No 127
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.28 E-value=1.1e-09 Score=88.80 Aligned_cols=108 Identities=18% Similarity=0.245 Sum_probs=78.5
Q ss_pred cceeEEEECCeEEEee-----ecCCCCEEEEEcCCCCChhhH------HHHHHHHH-hCCcEEEEeCCCCCCCCCCCCCC
Q 017221 60 IQHKVVNVNGINMHVA-----EKGQGPLILFIHGFPLLWYSW------RHQITALA-SLGYRAVAPDLRGYGDTDAPAEV 127 (375)
Q Consensus 60 ~~~~~~~~~g~~l~~~-----~~g~~~~il~~hG~~~~~~~~------~~~~~~L~-~~g~~v~~~d~~G~G~S~~~~~~ 127 (375)
.....++.|++.|--. ...+...||++-|.++.-+.. +..+..++ ..|.+|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 3445566677766532 223467999999988766551 12233333 348999999999999997655
Q ss_pred ccccHhHHHHHHHHHHHHhc-----CCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 128 PSYTCLHLVGDVIALLDAVA-----ADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 128 ~~~~~~~~~~d~~~~l~~l~-----~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
+.++++.|..+.++++. ++.++|++.|||+||.++..++.++
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 46889999888888884 3356899999999999999877665
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.26 E-value=7.2e-11 Score=97.75 Aligned_cols=107 Identities=23% Similarity=0.243 Sum_probs=76.3
Q ss_pred CCEEEEEcCCCCCh-hhHHHH---------HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 80 GPLILFIHGFPLLW-YSWRHQ---------ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 80 ~~~il~~hG~~~~~-~~~~~~---------~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
-|+||..|+++.+. ...... ...++++||.|+..|.||.|.|....... ..+.++|..+.++.+...
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Q 96 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQ 96 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHC
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhC
Confidence 47999999998653 111111 11288999999999999999998765321 556677777777776433
Q ss_pred ---CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 150 ---QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 150 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
..+|.++|.|++|..++.+|...|..+++++...+.....
T Consensus 97 pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 97 PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 4589999999999999999998888999999998876643
No 129
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=1.4e-09 Score=86.88 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=87.3
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
|++.++|+.+|....|.++...|... ..|+..+.||+|.-.. ...+++++++...+.|.....+ .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~-GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPE-GPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCC-CCEEEEeecc
Confidence 57899999999999999999999988 9999999999986332 3458999999988888887654 4999999999
Q ss_pred HHHHHHHHHHhC---CCccceEEEEccCCC
Q 017221 161 GALIAWYLCLFR---PDRVKALVNLSVVFN 187 (375)
Q Consensus 161 Gg~~a~~~a~~~---p~~v~~lil~~~~~~ 187 (375)
||.+|..+|.+- .+.|..++++++...
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999873 457999999998776
No 130
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.25 E-value=1.3e-10 Score=92.38 Aligned_cols=105 Identities=20% Similarity=0.213 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHh--------CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHH----HHh
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALAS--------LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALL----DAV 146 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~--------~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l----~~l 146 (375)
++.+|||+||.+|+...++.+...+.+ ..++++++|+......-. ...+.+.++.+.+.+ +..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 368999999999999988888766632 248899999876432221 123333333333333 333
Q ss_pred ---cCCCCcEEEEEeChHHHHHHHHHHhCC---CccceEEEEccCCCC
Q 017221 147 ---AADQEKVFVVGHDWGALIAWYLCLFRP---DRVKALVNLSVVFNP 188 (375)
Q Consensus 147 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~ 188 (375)
....++++++||||||.+|..++...+ +.|+.+|.+++|...
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 223569999999999999988887643 479999999977653
No 131
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.25 E-value=5.8e-10 Score=89.41 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=74.8
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHH-hCCcE----EEEeCCCCC----CCCC---CCC-------CCccccHhHHHHHHH
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALA-SLGYR----AVAPDLRGY----GDTD---APA-------EVPSYTCLHLVGDVI 140 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~-~~g~~----v~~~d~~G~----G~S~---~~~-------~~~~~~~~~~~~d~~ 140 (375)
..+.||+||++++...+..++..+. ++|.. ++.++.-|. |.=. ..+ +-...++...+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4589999999999999999999997 65432 344444443 2211 111 101246888999999
Q ss_pred HHHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCC-----ccceEEEEccCCCCC
Q 017221 141 ALLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPD-----RVKALVNLSVVFNPR 189 (375)
Q Consensus 141 ~~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~~~ 189 (375)
.++..|... -+++.+|||||||..++.++..+.. ++..+|.+++++...
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 999888543 2499999999999999999988632 589999999887643
No 132
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.23 E-value=4.1e-11 Score=98.37 Aligned_cols=96 Identities=30% Similarity=0.338 Sum_probs=69.9
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCC--CCCCCCCCC----ccccHhHHHHHHHHHHHHhc-----
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGY--GDTDAPAEV----PSYTCLHLVGDVIALLDAVA----- 147 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~--G~S~~~~~~----~~~~~~~~~~d~~~~l~~l~----- 147 (375)
.-|.|++-||.|+....+.++++.|++.||.|.++|++|. |........ ...-+.+...|+..+++.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 3589999999999999999999999999999999999994 333222111 11123344555555554442
Q ss_pred ------CCCCcEEEEEeChHHHHHHHHHHhCCC
Q 017221 148 ------ADQEKVFVVGHDWGALIAWYLCLFRPD 174 (375)
Q Consensus 148 ------~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 174 (375)
++..+|.++|||+||+.++..+....+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccccc
Confidence 224699999999999999999876543
No 133
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=6.8e-10 Score=85.12 Aligned_cols=251 Identities=14% Similarity=0.079 Sum_probs=144.5
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhC-C--cEEEEeCCCCCCCCC---CC----CCCccccHhHHHHHHHHHHHHhcCC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASL-G--YRAVAPDLRGYGDTD---AP----AEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~-g--~~v~~~d~~G~G~S~---~~----~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
++.|++++|.+|....|..++..|... + ..++.+-..||-.-. .. ...+.++++++++--.++++..-.+
T Consensus 29 ~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk 108 (301)
T KOG3975|consen 29 KPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPK 108 (301)
T ss_pred ceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCC
Confidence 678999999999999999999887653 1 568999888885543 11 1124578888888888888887777
Q ss_pred CCcEEEEEeChHHHHHHHHHHhC-C-CccceEEEEccCCC--CCCCCCchhhhHHhhc----CCceEEEeecCCcchHHH
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFR-P-DRVKALVNLSVVFN--PRNPNMKPLQVFKAVY----GDDYYICRFQEPGEIEAE 221 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~-p-~~v~~lil~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 221 (375)
..+++++|||-|+++.+...... + -.|.+++++-|... .+++...........+ ....+.....
T Consensus 109 ~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~-------- 180 (301)
T KOG3975|consen 109 DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWIL-------- 180 (301)
T ss_pred CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeec--------
Confidence 77999999999999999998743 2 25888888877654 2232222221111111 1111111111
Q ss_pred HHhcCcHHHHHHHHhhcCCCCCCCCCCCCC---CCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhh
Q 017221 222 FAQMGTETVLKEFLTYRNPGPLFLPKGKGF---GHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWEL 298 (375)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
...+++.++..........+..... .+...........++.+++........ +.
T Consensus 181 -----lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~------------------e~ 237 (301)
T KOG3975|consen 181 -----LPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDI------------------EY 237 (301)
T ss_pred -----ChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHH------------------HH
Confidence 1223333332221111000000000 000000000011122222222211100 00
Q ss_pred cccCcCCcccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEe-cCCCCCCCccChhHHHHHHHHHHh
Q 017221 299 LAPWTGAQIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVM-EGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 299 ~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
- ++-.+-+.+.+|..|..||.+.... +++.+|.. ++.+= ++..|.+...+.+..++.+.+.++
T Consensus 238 ~-----een~d~l~Fyygt~DgW~p~~~~d~------~kdd~~ee-d~~Ldedki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 238 C-----EENLDSLWFYYGTNDGWVPSHYYDY------YKDDVPEE-DLKLDEDKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred H-----HhcCcEEEEEccCCCCCcchHHHHH------Hhhhcchh-ceeeccccCCcceeecccHHHHHHHHHhhC
Confidence 0 1345778999999999999776544 77888876 55432 678999999999988888887653
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.20 E-value=6.5e-11 Score=93.73 Aligned_cols=106 Identities=21% Similarity=0.112 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCCChhhHHHHHH----HHHhCCcEEEEeCCCCC-----CCCCC-----------CC-------C---Cc
Q 017221 79 QGPLILFIHGFPLLWYSWRHQIT----ALASLGYRAVAPDLRGY-----GDTDA-----------PA-------E---VP 128 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~----~L~~~g~~v~~~d~~G~-----G~S~~-----------~~-------~---~~ 128 (375)
+++.||++||++.|...++.... .|.+.++..+.+|-|-- |-... .+ . ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999998876544 44442599999886521 11110 00 0 01
Q ss_pred cccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC--------CCccceEEEEccCCC
Q 017221 129 SYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR--------PDRVKALVNLSVVFN 187 (375)
Q Consensus 129 ~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~lil~~~~~~ 187 (375)
...+++..+.+.+.++..+. -..|+|+|.||.+|..++... ...++.+|++++...
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 12334444455555555432 247999999999999888652 124788898887653
No 135
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.20 E-value=1.9e-10 Score=99.71 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=82.5
Q ss_pred eeEEEE-CCeEEEeeec-CCCCEEEE-EcCC---CCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHH
Q 017221 62 HKVVNV-NGINMHVAEK-GQGPLILF-IHGF---PLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHL 135 (375)
Q Consensus 62 ~~~~~~-~g~~l~~~~~-g~~~~il~-~hG~---~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~ 135 (375)
..+... +|+.+.+... +.-..+-. -+.. ......|..+++.|.+.||.+ ..|++|+|.+.+... ..++.
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~----~~~~~ 144 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN----RLPET 144 (440)
T ss_pred CceecCCCCceEEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccc----cHHHH
Confidence 344555 5777776642 22111112 1211 345678999999999999866 889999999877542 23344
Q ss_pred HHHHHHHHH----HhcCCCCcEEEEEeChHHHHHHHHHHhCCCc----cceEEEEccCCCC
Q 017221 136 VGDVIALLD----AVAADQEKVFVVGHDWGALIAWYLCLFRPDR----VKALVNLSVVFNP 188 (375)
Q Consensus 136 ~~d~~~~l~----~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~lil~~~~~~~ 188 (375)
.+++.++++ ..+.+ +++|+||||||.++..++..+|+. |+++|.++++...
T Consensus 145 ~~~Lk~lIe~~~~~~g~~--kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 145 MDGLKKKLETVYKASGGK--KVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHHHHHcCCC--CEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 445555444 44455 999999999999999999988864 7899999887653
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.15 E-value=5.4e-10 Score=83.99 Aligned_cols=106 Identities=18% Similarity=0.262 Sum_probs=75.0
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCC-----------------CCCCCCccccHhHHHHHHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDT-----------------DAPAEVPSYTCLHLVGDVIALL 143 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S-----------------~~~~~~~~~~~~~~~~d~~~~l 143 (375)
.+||++||.+.+...|..+.+.|.-.....+++.-|-.-.+ ....+ ........++.+..++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANLI 82 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHHH
Confidence 48999999999999998888887766677777754421111 00011 2234555666666666
Q ss_pred HHh---cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 144 DAV---AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 144 ~~l---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
++. +++..+|.+-|.|+||.+++..+..+|..+.+++...+...
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 654 44456899999999999999999999888888876665443
No 137
>PRK04940 hypothetical protein; Provisional
Probab=99.14 E-value=5.4e-09 Score=78.07 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=53.9
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEEEEEeCh
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVFVVGHDW 160 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~l~G~S~ 160 (375)
||++||+.+++..-..=+..+. .+.+|.+-+-.+ ..+..+.++.+.+.+..+... .+++.++|.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-----~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-----FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-----eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7999999988776111122221 112222212111 123333344455555432211 13799999999
Q ss_pred HHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 161 GALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 161 Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
||+.|..++.++. + ..|+++|+..+
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 9999999999985 4 56779998876
No 138
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.14 E-value=6.9e-09 Score=82.85 Aligned_cols=96 Identities=20% Similarity=0.110 Sum_probs=70.5
Q ss_pred EEcCCC--CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHH
Q 017221 85 FIHGFP--LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGA 162 (375)
Q Consensus 85 ~~hG~~--~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg 162 (375)
++|+.+ ++...|..+...|... +.|+++|.+|+|.+.... .+.+++++.+...+..... ..+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~-~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAG-GRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcC-CCCeEEEEECHHH
Confidence 345443 6777899999999775 999999999998765433 3566666665555443321 2389999999999
Q ss_pred HHHHHHHHh---CCCccceEEEEccCC
Q 017221 163 LIAWYLCLF---RPDRVKALVNLSVVF 186 (375)
Q Consensus 163 ~~a~~~a~~---~p~~v~~lil~~~~~ 186 (375)
.++..++.+ .++.+.+++++++..
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 999988886 356789999887644
No 139
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.06 E-value=9.7e-10 Score=81.72 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=66.4
Q ss_pred CCEEEEEcCCC---CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhc---CCCCcE
Q 017221 80 GPLILFIHGFP---LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVA---ADQEKV 153 (375)
Q Consensus 80 ~~~il~~hG~~---~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~---~~~~~~ 153 (375)
.|..||+||+- ++...-...+....++||+|..++ +|.+.. ..++++...++...++..- ..-+++
T Consensus 67 ~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q-----~htL~qt~~~~~~gv~filk~~~n~k~l 138 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQ-----VHTLEQTMTQFTHGVNFILKYTENTKVL 138 (270)
T ss_pred ccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCcc-----cccHHHHHHHHHHHHHHHHHhcccceeE
Confidence 68999999963 222222334555667799999875 445432 3456555555555444431 112367
Q ss_pred EEEEeChHHHHHHHHHHhC-CCccceEEEEccCCC
Q 017221 154 FVVGHDWGALIAWYLCLFR-PDRVKALVNLSVVFN 187 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~-p~~v~~lil~~~~~~ 187 (375)
.+-|||.|+.+|+.+..+. ..+|.|++++++...
T Consensus 139 ~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 139 TFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred EEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 7779999999999988774 447999999998764
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.06 E-value=6.8e-09 Score=82.34 Aligned_cols=124 Identities=25% Similarity=0.266 Sum_probs=86.4
Q ss_pred eEEEECCeEEEeeecC------CCCEEEEEcCCCCChhhHHHHH--HHHHhC-CcEEEEeCC-C------CCCCCCCCCC
Q 017221 63 KVVNVNGINMHVAEKG------QGPLILFIHGFPLLWYSWRHQI--TALASL-GYRAVAPDL-R------GYGDTDAPAE 126 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~--~~L~~~-g~~v~~~d~-~------G~G~S~~~~~ 126 (375)
..+..+|.+..|.-.- +.|.||.+||..++...++... +.|+++ ||-|+.+|- + +.|.+..+.+
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 3455666666554432 1479999999999888776655 666654 999999952 2 1233322221
Q ss_pred --CccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 127 --VPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 127 --~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
....+...+.+-+..++.+.++++++|++.|.|-||.++..++..+|+.+.++-.+++..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 112234445555556666667888899999999999999999999999999998888665
No 141
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.04 E-value=2e-07 Score=77.89 Aligned_cols=126 Identities=11% Similarity=0.071 Sum_probs=78.5
Q ss_pred eeEEEECCeEEE--eeecCC---CCEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEeCCCCC--CCCC---------
Q 017221 62 HKVVNVNGINMH--VAEKGQ---GPLILFIHGFPLLWY---SWRHQITALASLGYRAVAPDLRGY--GDTD--------- 122 (375)
Q Consensus 62 ~~~~~~~g~~l~--~~~~g~---~~~il~~hG~~~~~~---~~~~~~~~L~~~g~~v~~~d~~G~--G~S~--------- 122 (375)
...++.++.++- |..... ...||++||.+.+.. ...++-..|.+.|+..+.+.+|.- ....
T Consensus 64 ~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 64 VQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred cEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 445555655543 333322 349999999997754 345666778889999999998871 1000
Q ss_pred -CCCC--Ccc-------------ccH----hHHHHHHHHHHHHhcCCCC-cEEEEEeChHHHHHHHHHHhCCC-ccceEE
Q 017221 123 -APAE--VPS-------------YTC----LHLVGDVIALLDAVAADQE-KVFVVGHDWGALIAWYLCLFRPD-RVKALV 180 (375)
Q Consensus 123 -~~~~--~~~-------------~~~----~~~~~d~~~~l~~l~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~-~v~~li 180 (375)
.... ... ... ..+..-+.+++..+...+. +++|+||+.|+..++.+....+. .++++|
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 0000 000 011 1223333344444433322 59999999999999999998864 589999
Q ss_pred EEccCCC
Q 017221 181 NLSVVFN 187 (375)
Q Consensus 181 l~~~~~~ 187 (375)
++++...
T Consensus 224 ~I~a~~p 230 (310)
T PF12048_consen 224 LINAYWP 230 (310)
T ss_pred EEeCCCC
Confidence 9998654
No 142
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.03 E-value=2.7e-09 Score=88.46 Aligned_cols=62 Identities=19% Similarity=0.182 Sum_probs=44.9
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCcccccc-CCceeEEEecCCCCCCC-ccChhHHHHHHHH
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAV-PLLEEVIVMEGVGHFIN-EEKPDEVNKHIYN 370 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~ 370 (375)
..+.|++|.+|..|.++|.....+..++ +.+.. .+. +++.+++.+|... ...-....+.|.+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~--~c~~G~a~V-~~~~~~~~~H~~~~~~~~~~a~~Wl~~ 280 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAK--WCAAGGADV-EYVRYPGGGHLGAAFASAPDALAWLDD 280 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHH--HHHcCCCCE-EEEecCCCChhhhhhcCcHHHHHHHHH
Confidence 4579999999999999999988877643 55666 566 8999999999863 2333333344443
No 143
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.00 E-value=2.6e-09 Score=84.78 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCC------CCCC----------------Cc-----cccH
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTD------APAE----------------VP-----SYTC 132 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~------~~~~----------------~~-----~~~~ 132 (375)
-|.+||-||.|++...|..++-.|+++||.|.++++|-+-.+. .+.+ .. ..-.
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 4899999999999999999999999999999999998654331 0000 00 0001
Q ss_pred hHHHHHHHH---HHHHhc----------------------CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 133 LHLVGDVIA---LLDAVA----------------------ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 133 ~~~~~d~~~---~l~~l~----------------------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
-.-+.+... +++.+. ++..++.++|||+||..++...+.+ ..+++.|++++...
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeeec
Confidence 112222222 222221 1123688999999999998888876 45999999987654
Q ss_pred C
Q 017221 188 P 188 (375)
Q Consensus 188 ~ 188 (375)
+
T Consensus 277 P 277 (399)
T KOG3847|consen 277 P 277 (399)
T ss_pred c
Confidence 4
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.96 E-value=1.1e-09 Score=85.57 Aligned_cols=90 Identities=23% Similarity=0.266 Sum_probs=53.7
Q ss_pred CEEEEEcCCCC-ChhhHHHHHHHHHhCCcE---EEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC-CCcEEE
Q 017221 81 PLILFIHGFPL-LWYSWRHQITALASLGYR---AVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD-QEKVFV 155 (375)
Q Consensus 81 ~~il~~hG~~~-~~~~~~~~~~~L~~~g~~---v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~l 155 (375)
.+|||+||.++ ....|..+.+.|.++||. |+++++-....+.... ......+.+..+.++++.+... ..++.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~--~~~~~~~~~~~l~~fI~~Vl~~TGakVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ--NAHMSCESAKQLRAFIDAVLAYTGAKVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH--HHHB-HHHHHHHHHHHHHHHHHHT--EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc--ccccchhhHHHHHHHHHHHHHhhCCEEEE
Confidence 58999999998 667899999999999999 8999985443322111 0111223345555555554321 228999
Q ss_pred EEeChHHHHHHHHHHhC
Q 017221 156 VGHDWGALIAWYLCLFR 172 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~ 172 (375)
+||||||.++..+....
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999998887643
No 145
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.96 E-value=8e-09 Score=81.55 Aligned_cols=118 Identities=19% Similarity=0.223 Sum_probs=71.0
Q ss_pred ECCeEEEeeecCC---------CCEEEEEcCCCCChhhHHH-HHH-------HHHhCCcEEEEeCCC-CCCCCCCCCCCc
Q 017221 67 VNGINMHVAEKGQ---------GPLILFIHGFPLLWYSWRH-QIT-------ALASLGYRAVAPDLR-GYGDTDAPAEVP 128 (375)
Q Consensus 67 ~~g~~l~~~~~g~---------~~~il~~hG~~~~~~~~~~-~~~-------~L~~~g~~v~~~d~~-G~G~S~~~~~~~ 128 (375)
.-|.++.|.-.-+ -|.+||+||.|..+.+-.. +.. ...+.++-|+++.+- =+..++...
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t--- 245 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT--- 245 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccccc---
Confidence 3466676654322 2899999999865554322 211 111222334444311 111122111
Q ss_pred cccHhHHHHHHH-HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 129 SYTCLHLVGDVI-ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 129 ~~~~~~~~~d~~-~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
..-.....+-+. .+.++..++..+|+++|.|+||+-++.++.++|+.+.+.+++++...
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 112233333344 34455677778999999999999999999999999999999998653
No 146
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.95 E-value=4.8e-09 Score=87.06 Aligned_cols=106 Identities=29% Similarity=0.468 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCCCChhh--------------H----HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCC---ccccHhHHH-
Q 017221 79 QGPLILFIHGFPLLWYS--------------W----RHQITALASLGYRAVAPDLRGYGDTDAPAEV---PSYTCLHLV- 136 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~--------------~----~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~---~~~~~~~~~- 136 (375)
+.|+||++||-++..+. + ..+...|+++||.|+++|.+|+|+....... ..++...++
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 35899999997766532 1 2357789999999999999999987554311 112222222
Q ss_pred --------------HHHHHHHHHhc----CCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccC
Q 017221 137 --------------GDVIALLDAVA----ADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVV 185 (375)
Q Consensus 137 --------------~d~~~~l~~l~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 185 (375)
-|....++.+. +++++|.++|+||||..++.+++.. ++|++.|..+-.
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 23334555553 2356999999999999999999987 689888877644
No 147
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.91 E-value=2.2e-09 Score=90.06 Aligned_cols=107 Identities=19% Similarity=0.295 Sum_probs=64.6
Q ss_pred CCEEEEEcCCCCCh--hhH-HHHHHHHHh---CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHH----HhcCC
Q 017221 80 GPLILFIHGFPLLW--YSW-RHQITALAS---LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLD----AVAAD 149 (375)
Q Consensus 80 ~~~il~~hG~~~~~--~~~-~~~~~~L~~---~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~----~l~~~ 149 (375)
+|+++++|||.++. ..| ..+.+.+.. .+++|+++|+...-...... .........+.+..++. ..+.+
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 78999999999877 344 455555544 47999999996322111000 11122333444444444 34566
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCC--ccceEEEEccCCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRPD--RVKALVNLSVVFNP 188 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~ 188 (375)
.+++++||||+||++|-.++..... +|..++.++|+...
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 6799999999999999999999877 89999999988764
No 148
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.85 E-value=1.6e-07 Score=80.47 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=115.5
Q ss_pred HHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC---CCCcEEEEEeChHHHHHHHHHHhCCCc
Q 017221 99 QITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA---DQEKVFVVGHDWGALIAWYLCLFRPDR 175 (375)
Q Consensus 99 ~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 175 (375)
+.-.|.. |+.|+.+.+. ..+. +.-++++......++++.+.. +..+.+|+|-|.||+.++.+|+.+|+.
T Consensus 93 vG~AL~~-GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHc-CCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 3444544 8898888765 1111 345888888877777777643 223899999999999999999999999
Q ss_pred cceEEEEccCCCCCCC--CCchhhhHHhhcCCceEEEeec-------CCcchHHHHHhcCcH-HHHHHHHhhcCCC----
Q 017221 176 VKALVNLSVVFNPRNP--NMKPLQVFKAVYGDDYYICRFQ-------EPGEIEAEFAQMGTE-TVLKEFLTYRNPG---- 241 (375)
Q Consensus 176 v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 241 (375)
+.-+|+-+++.+.+.. ...+......+++..|+..... .....-..+...+.. .+..+.+.....-
T Consensus 165 ~gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~e~ 244 (581)
T PF11339_consen 165 VGPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDTER 244 (581)
T ss_pred cCceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCCch
Confidence 9999888877775542 2223333333333322211110 000111222222222 2233332221111
Q ss_pred CCCCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHhhhcCccceeeeeeccccchhhcccCcCCcccccEEEEecCCCcC
Q 017221 242 PLFLPKGKGFGHPPDAQIALPSWLSEEDVKYYASKYEKAGFTGGINYYRNIELNWELLAPWTGAQIKVPVKFIVGDLDLT 321 (375)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~ 321 (375)
..+....+||.. ...++.+++......+-..+....-... .......++++|++|+.++.|..|.+
T Consensus 245 ~Rfl~FErWwgg--------~~~l~~~ei~~Iv~nLFvgNrL~~g~~~------~~~G~~~DLr~Ir~Piivfas~gDnI 310 (581)
T PF11339_consen 245 ERFLEFERWWGG--------FYDLNGEEILWIVENLFVGNRLAKGEFR------VSDGRRVDLRNIRSPIIVFASYGDNI 310 (581)
T ss_pred hhhhHHHHHhCC--------ccCCCHHHHHHHHHHHhccchhccCcee------ccCCcEeehhhCCCCEEEEeccCCCC
Confidence 111111112222 2235666666655544332221111111 11122344559999999999999999
Q ss_pred CCCCCchhhh
Q 017221 322 YNAPGTKDYI 331 (375)
Q Consensus 322 ~~~~~~~~~~ 331 (375)
+|++.+..|+
T Consensus 311 TPP~QaL~WI 320 (581)
T PF11339_consen 311 TPPQQALNWI 320 (581)
T ss_pred CChhHhccch
Confidence 9999886664
No 149
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.76 E-value=1.6e-07 Score=75.26 Aligned_cols=110 Identities=12% Similarity=0.130 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHh-CCc--EEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCc
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALAS-LGY--RAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEK 152 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~-~g~--~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~ 152 (375)
.++..+||+||+..+.+.-..-+..+.. -|+ .++.+.||..|.-..... ...+...-...+.++++.+... .++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 3478999999999876654332333322 223 799999998876322111 1224444555666666666432 459
Q ss_pred EEEEEeChHHHHHHHHHHhC----C-----CccceEEEEccCCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFR----P-----DRVKALVNLSVVFNP 188 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~----p-----~~v~~lil~~~~~~~ 188 (375)
|++++||||+.+.+.+.... + .++..+|+.+|-...
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999887552 1 257889999876643
No 150
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.75 E-value=2.4e-06 Score=74.73 Aligned_cols=127 Identities=13% Similarity=0.110 Sum_probs=76.5
Q ss_pred eeEEEEC---CeEEEeeecC------CCCEEEEEcCCCCChhhHHHHHH----------------HH-------HhCCcE
Q 017221 62 HKVVNVN---GINMHVAEKG------QGPLILFIHGFPLLWYSWRHQIT----------------AL-------ASLGYR 109 (375)
Q Consensus 62 ~~~~~~~---g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~~----------------~L-------~~~g~~ 109 (375)
..+++++ +..++|+-.. +.|.|+++.|++|.+..+..+.+ .| .+. .+
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-an 117 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-AN 117 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-Cc
Confidence 3455553 4566655321 26999999999987764322111 11 122 78
Q ss_pred EEEeC-CCCCCCCCCCCCCccccHhHHHHHHHHHHHHhc----C-CCCcEEEEEeChHHHHHHHHHHhC----------C
Q 017221 110 AVAPD-LRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVA----A-DQEKVFVVGHDWGALIAWYLCLFR----------P 173 (375)
Q Consensus 110 v~~~d-~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~----~-~~~~~~l~G~S~Gg~~a~~~a~~~----------p 173 (375)
++.+| ..|.|.|.........+-++.++++.+++...- . ...+++|.|.|+||..+-.+|..- +
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 99999 678999965432111111233355555555431 1 234899999999998777766542 1
Q ss_pred CccceEEEEccCCCCC
Q 017221 174 DRVKALVNLSVVFNPR 189 (375)
Q Consensus 174 ~~v~~lil~~~~~~~~ 189 (375)
-.++|+++-+|...+.
T Consensus 198 inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 198 INLQGYMLGNPVTYMD 213 (433)
T ss_pred ccceeeEecCCCcCch
Confidence 2578999888765543
No 151
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.74 E-value=1.6e-06 Score=75.52 Aligned_cols=105 Identities=21% Similarity=0.301 Sum_probs=66.7
Q ss_pred CCEEEEEcCCCCCh-hhHHHHHHHHHhCC----cEEEEeCCCCCCCCCCCCCC--ccccHhHHHHHHHHHHHHh-c--CC
Q 017221 80 GPLILFIHGFPLLW-YSWRHQITALASLG----YRAVAPDLRGYGDTDAPAEV--PSYTCLHLVGDVIALLDAV-A--AD 149 (375)
Q Consensus 80 ~~~il~~hG~~~~~-~~~~~~~~~L~~~g----~~v~~~d~~G~G~S~~~~~~--~~~~~~~~~~d~~~~l~~l-~--~~ 149 (375)
.|+|+++||..... ......++.|.++| ..++.+|..+. ..+..+. .......+++++.-.++.. . .+
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~--~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT--THRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc--ccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 58999999954211 11233455565555 34677775321 1111110 1112334556666666654 2 23
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
.++.+|.|+||||..|+.++.++|+.+.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 4578999999999999999999999999999999864
No 152
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.73 E-value=5.7e-07 Score=79.81 Aligned_cols=126 Identities=15% Similarity=0.154 Sum_probs=83.3
Q ss_pred eeEEEEC---CeEEEeeecC------CCCEEEEEcCCCCChhhHHHHHH-------------------HHHhCCcEEEEe
Q 017221 62 HKVVNVN---GINMHVAEKG------QGPLILFIHGFPLLWYSWRHQIT-------------------ALASLGYRAVAP 113 (375)
Q Consensus 62 ~~~~~~~---g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~~-------------------~L~~~g~~v~~~ 113 (375)
..+++++ +..++|+-.. +.|.||++.|++|.+..+..+.+ .+.+. .+++.+
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 3455665 6778765432 36999999999998887754432 11223 789999
Q ss_pred CCC-CCCCCCCCCCC-ccccHhHHHHHHHHHHHHhc-----CCCCcEEEEEeChHHHHHHHHHHh----C------CCcc
Q 017221 114 DLR-GYGDTDAPAEV-PSYTCLHLVGDVIALLDAVA-----ADQEKVFVVGHDWGALIAWYLCLF----R------PDRV 176 (375)
Q Consensus 114 d~~-G~G~S~~~~~~-~~~~~~~~~~d~~~~l~~l~-----~~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v 176 (375)
|.| |.|.|...... ...+.++.++|+.++++..- ....+++|.|-|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 954 99999765532 23477888888888887762 224489999999999988777755 2 2348
Q ss_pred ceEEEEccCCCC
Q 017221 177 KALVNLSVVFNP 188 (375)
Q Consensus 177 ~~lil~~~~~~~ 188 (375)
+|+++.+|...+
T Consensus 172 kGi~IGng~~dp 183 (415)
T PF00450_consen 172 KGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEESE-SBH
T ss_pred ccceecCccccc
Confidence 999999988765
No 153
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.72 E-value=6.1e-06 Score=71.63 Aligned_cols=127 Identities=14% Similarity=0.035 Sum_probs=81.4
Q ss_pred eEEEEC---CeEEEeeecC------CCCEEEEEcCCCCChhhHHHHHHHHH-----hC-------------CcEEEEeCC
Q 017221 63 KVVNVN---GINMHVAEKG------QGPLILFIHGFPLLWYSWRHQITALA-----SL-------------GYRAVAPDL 115 (375)
Q Consensus 63 ~~~~~~---g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~~~L~-----~~-------------g~~v~~~d~ 115 (375)
.++.++ +..++|+-.. ..|.||++.|++|.+..- .+..++- .. -.+++.+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 466665 7888876432 268999999999876543 3222221 01 146888887
Q ss_pred C-CCCCCCCCCCC-ccccHhHHHHHHHHHHHHhcC-----CCCcEEEEEeChHHHHHHHHHHh----C------CCccce
Q 017221 116 R-GYGDTDAPAEV-PSYTCLHLVGDVIALLDAVAA-----DQEKVFVVGHDWGALIAWYLCLF----R------PDRVKA 178 (375)
Q Consensus 116 ~-G~G~S~~~~~~-~~~~~~~~~~d~~~~l~~l~~-----~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~ 178 (375)
| |.|.|-..... ...+-+..++|...++...-. ..++++|.|-|++|+..-.+|.. . +-.++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 77887644321 123555667777776655422 24589999999999777666654 2 125789
Q ss_pred EEEEccCCCCCC
Q 017221 179 LVNLSVVFNPRN 190 (375)
Q Consensus 179 lil~~~~~~~~~ 190 (375)
+++-+|...+..
T Consensus 206 ~~IGNg~td~~~ 217 (454)
T KOG1282|consen 206 YAIGNGLTDPEI 217 (454)
T ss_pred EEecCcccCccc
Confidence 888888777543
No 154
>PLN02209 serine carboxypeptidase
Probab=98.68 E-value=2.7e-05 Score=68.30 Aligned_cols=125 Identities=14% Similarity=0.117 Sum_probs=78.0
Q ss_pred eEEEEC---CeEEEeeecC------CCCEEEEEcCCCCChhhHHHHHH----------------HH-------HhCCcEE
Q 017221 63 KVVNVN---GINMHVAEKG------QGPLILFIHGFPLLWYSWRHQIT----------------AL-------ASLGYRA 110 (375)
Q Consensus 63 ~~~~~~---g~~l~~~~~g------~~~~il~~hG~~~~~~~~~~~~~----------------~L-------~~~g~~v 110 (375)
.+++++ +..++|.-.. +.|+|+++.|++|.+..+..+.+ .| .+. .++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anl 120 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANI 120 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcE
Confidence 355553 4556654322 26999999999988776533221 11 122 689
Q ss_pred EEeC-CCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC-----CCCcEEEEEeChHHHHHHHHHHhC----------CC
Q 017221 111 VAPD-LRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA-----DQEKVFVVGHDWGALIAWYLCLFR----------PD 174 (375)
Q Consensus 111 ~~~d-~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~-----~~~~~~l~G~S~Gg~~a~~~a~~~----------p~ 174 (375)
+.+| ..|.|.|.........+-++.++|+.+++...-. ...+++|.|.|+||..+-.+|..- +-
T Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~i 200 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPI 200 (437)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCce
Confidence 9999 6688998644321222333455677776665421 134899999999998777666542 11
Q ss_pred ccceEEEEccCCCC
Q 017221 175 RVKALVNLSVVFNP 188 (375)
Q Consensus 175 ~v~~lil~~~~~~~ 188 (375)
.++|+++.++...+
T Consensus 201 nl~Gi~igng~td~ 214 (437)
T PLN02209 201 NLQGYVLGNPITHI 214 (437)
T ss_pred eeeeEEecCcccCh
Confidence 47888888886654
No 155
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.68 E-value=1.8e-06 Score=67.01 Aligned_cols=107 Identities=23% Similarity=0.178 Sum_probs=77.1
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCC-----cEEEEeCCCCC----CCCCCCC---------CCccccHhHHHHHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLG-----YRAVAPDLRGY----GDTDAPA---------EVPSYTCLHLVGDVIAL 142 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g-----~~v~~~d~~G~----G~S~~~~---------~~~~~~~~~~~~d~~~~ 142 (375)
-+.||+||.+|+......++..|...+ --+..+|--|. |.=+... .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378899999999999999999998763 13556665552 1111111 01234566778888888
Q ss_pred HHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCC-----ccceEEEEccCCC
Q 017221 143 LDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPD-----RVKALVNLSVVFN 187 (375)
Q Consensus 143 l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 187 (375)
+.+|+.. -.++.++||||||.-...|+..+.. .+..+|.++++..
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 8887543 2399999999999999999988632 3899999998876
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.67 E-value=2.2e-07 Score=80.66 Aligned_cols=100 Identities=17% Similarity=0.121 Sum_probs=60.1
Q ss_pred CCEEEEEcCCC--CChhhHHHHH-HHHHhCC--cEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC------
Q 017221 80 GPLILFIHGFP--LLWYSWRHQI-TALASLG--YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA------ 148 (375)
Q Consensus 80 ~~~il~~hG~~--~~~~~~~~~~-~~L~~~g--~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~------ 148 (375)
.|.++++||.+ ....+|...+ ..|...| ..|.++|++.-- ....+...++-+..+.+....
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 58899999987 2222232222 2232222 566777776321 123455555555555553221
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCC-CccceEEEEccCCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRP-DRVKALVNLSVVFN 187 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~lil~~~~~~ 187 (375)
...+|+|+|.|||+.++++...... ..|+++|.++=+..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~ 287 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLD 287 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEeccccc
Confidence 2458999999999988888876643 34889888875544
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.66 E-value=1.1e-07 Score=75.48 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=51.5
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhC--CcEEEEeCCCCCCCCCCCCCCccccHhH----HHHHHHHHHHHhcCCCCcE
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASL--GYRAVAPDLRGYGDTDAPAEVPSYTCLH----LVGDVIALLDAVAADQEKV 153 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~--g~~v~~~d~~G~G~S~~~~~~~~~~~~~----~~~d~~~~l~~l~~~~~~~ 153 (375)
.-.|||+||+.|+..+|..+...+... .+.-..+...++...... ...+++. +++++.+.++.......++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccc
Confidence 347999999999999998887777661 122112222222111111 1123333 3344444443333323489
Q ss_pred EEEEeChHHHHHHHHHHh
Q 017221 154 FVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~ 171 (375)
.++||||||.++-.+...
T Consensus 81 sfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALGL 98 (217)
T ss_pred eEEEecccHHHHHHHHHH
Confidence 999999999999766653
No 158
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.62 E-value=1.4e-06 Score=66.11 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=79.6
Q ss_pred CCEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEE
Q 017221 80 GPLILFIHGFPLLWY---SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVF 154 (375)
Q Consensus 80 ~~~il~~hG~~~~~~---~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~ 154 (375)
+-.|||+-|.+..-. .-..+...|.+.+|..+-+-++.+ .......++++-++|+..++++++.. ...++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss-----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS-----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc-----ccccccccccccHHHHHHHHHHhhccCcccceE
Confidence 457888988876543 235667788888999999987622 11223457888899999999988754 45899
Q ss_pred EEEeChHHHHHHHHHHh--CCCccceEEEEccCCCCC
Q 017221 155 VVGHDWGALIAWYLCLF--RPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~~ 189 (375)
++|||.|+.=.+.|... .|..+++.|+.+|....+
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999999988843 366789999999887653
No 159
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.61 E-value=1.7e-07 Score=75.72 Aligned_cols=103 Identities=19% Similarity=0.223 Sum_probs=73.2
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
..||++-|..|--+. .....-.+.||.|+.+++||++.|...+- +..+....-.-+.-.+..++-..+.|++.|+|.
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~-p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPY-PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCC-cccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 467777787653321 11222234589999999999999988763 222333333334445677777777999999999
Q ss_pred HHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 161 GALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 161 Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
||.-++.+|..||+ |+++|+-++.-+
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecchhh
Confidence 99999999999997 999998876544
No 160
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.60 E-value=2.4e-07 Score=81.39 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=86.9
Q ss_pred eeEEEECCeEEEeee---c--CCCCEEEEEcCCCCChh-----hHHHHHH---HHHhCCcEEEEeCCCCCCCCCCCCCCc
Q 017221 62 HKVVNVNGINMHVAE---K--GQGPLILFIHGFPLLWY-----SWRHQIT---ALASLGYRAVAPDLRGYGDTDAPAEVP 128 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~---~--g~~~~il~~hG~~~~~~-----~~~~~~~---~L~~~g~~v~~~d~~G~G~S~~~~~~~ 128 (375)
......||++|+-.. . |+.|+++..+-++-... .-....+ .++.+||.|+..|.||.|.|+..-+.
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~- 100 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP- 100 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-
Confidence 345667999998443 3 34688888882221111 1122233 57788999999999999999886642
Q ss_pred ccc-HhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 129 SYT-CLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 129 ~~~-~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
..+ ..+-.-|+.+.+...-....++..+|.|++|...+.+|+..|..+++++...+...
T Consensus 101 ~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 101 ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 223 23333455555555444466999999999999999999999888999988877665
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.58 E-value=8.4e-07 Score=78.86 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=74.3
Q ss_pred CCEEEEEcCCCCChhh-H--HHHHHHHHhC-CcEEEEeCCCCCCCCCCCC-----CCccccHhHHHHHHHHHHHHhcC--
Q 017221 80 GPLILFIHGFPLLWYS-W--RHQITALASL-GYRAVAPDLRGYGDTDAPA-----EVPSYTCLHLVGDVIALLDAVAA-- 148 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~-~--~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~-----~~~~~~~~~~~~d~~~~l~~l~~-- 148 (375)
+|++|++-|=+ .... + ..++..|+++ |-.++++++|-+|.|.+.. .....+.++..+|+..+++++..
T Consensus 29 gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 56666665433 3322 1 2355566654 8899999999999997543 23567899999999999988862
Q ss_pred ---CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 149 ---DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 149 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
+..|++++|.|+||.+|..+-.+||+.|.|.+..+++....
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAK 151 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeee
Confidence 24589999999999999999999999999999999887753
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.55 E-value=9.5e-06 Score=65.99 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=51.5
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc-cChhHHHHHHHHHH
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE-EKPDEVNKHIYNFF 372 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 372 (375)
...+|-++++++.|.+++.+..++..+. .++..-++ +...+++++|..++ ++|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~--~~~~G~~V-~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEE--ARRKGWDV-RAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHH--HHHcCCeE-EEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 5578999999999999999988876643 33334444 88889999999855 68999999999885
No 163
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=3.2e-07 Score=77.83 Aligned_cols=103 Identities=25% Similarity=0.255 Sum_probs=81.5
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcE---EEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYR---AVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~---v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
.-+++++||++.+...|..+...+...|+. ++.+++++. ....+ .....+++..-+.+.+...+.+ ++.++
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~~~V~~~l~~~ga~--~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS---LAVRGEQLFAYVDEVLAKTGAK--KVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc---ccccHHHHHHHHHHHHhhcCCC--ceEEE
Confidence 448999999988888888887777777777 888888865 11111 2345667777777777777777 99999
Q ss_pred EeChHHHHHHHHHHhCC--CccceEEEEccCCCC
Q 017221 157 GHDWGALIAWYLCLFRP--DRVKALVNLSVVFNP 188 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~ 188 (375)
||||||..+..++...+ .+|+.++.++++-..
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999999887 789999999987653
No 164
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.47 E-value=3.5e-06 Score=65.23 Aligned_cols=83 Identities=22% Similarity=0.283 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcE-EEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYR-AVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~-v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
...|||+.|+|++...+.++. + ..++. ++++|+|..- .+. |+ -+ .+++.|+|+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~-~~~~D~l~~yDYr~l~------------~d~---~~------~~--y~~i~lvAW 64 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--L-PENYDVLICYDYRDLD------------FDF---DL------SG--YREIYLVAW 64 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--C-CCCccEEEEecCcccc------------ccc---cc------cc--CceEEEEEE
Confidence 479999999999987766543 1 22344 5678887221 110 10 12 349999999
Q ss_pred ChHHHHHHHHHHhCCCccceEEEEccCCCCCC
Q 017221 159 DWGALIAWYLCLFRPDRVKALVNLSVVFNPRN 190 (375)
Q Consensus 159 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 190 (375)
|||-.+|.++....| ++..|.+++...+.+
T Consensus 65 SmGVw~A~~~l~~~~--~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP--FKRAIAINGTPYPID 94 (213)
T ss_pred eHHHHHHHHHhccCC--cceeEEEECCCCCcC
Confidence 999999998876554 778888887776544
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.47 E-value=6.2e-07 Score=73.67 Aligned_cols=109 Identities=19% Similarity=0.249 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCCChhhH--HHHHHHHHhCC----cEEEEeCCCCCCCC--CCC---------C-CCcccc-HhHHHHHHH
Q 017221 80 GPLILFIHGFPLLWYSW--RHQITALASLG----YRAVAPDLRGYGDT--DAP---------A-EVPSYT-CLHLVGDVI 140 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~--~~~~~~L~~~g----~~v~~~d~~G~G~S--~~~---------~-~~~~~~-~~~~~~d~~ 140 (375)
-|+|+++||.......+ ...++.+.+.| ..+++++..+.+.. ... . ...... ...+.+++.
T Consensus 24 ~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~ 103 (251)
T PF00756_consen 24 YPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELI 103 (251)
T ss_dssp EEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHH
T ss_pred CEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccch
Confidence 48999999972222222 22333343432 45666666555411 100 0 001112 233455666
Q ss_pred HHHHHh-cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 141 ALLDAV-AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 141 ~~l~~l-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
..++.- .....+..++|+||||..|+.++.++|+.+.+++.++|...+
T Consensus 104 p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 104 PYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 666554 233224899999999999999999999999999999987654
No 166
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.40 E-value=3e-06 Score=73.64 Aligned_cols=115 Identities=22% Similarity=0.368 Sum_probs=75.7
Q ss_pred EEEECCeEEEeeecCCCCEEEEEc-CCCCChhhHHHHHHHHHhCCcEE-----EE-eCCCCCCCCCCCCCCccccHhHHH
Q 017221 64 VVNVNGINMHVAEKGQGPLILFIH-GFPLLWYSWRHQITALASLGYRA-----VA-PDLRGYGDTDAPAEVPSYTCLHLV 136 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~~~~il~~h-G~~~~~~~~~~~~~~L~~~g~~v-----~~-~d~~G~G~S~~~~~~~~~~~~~~~ 136 (375)
+...+|+.+.+...|....|-.+- ........|..+++.|.+.||.. .+ +|+|- | ....+++.
T Consensus 34 ~~~~~gv~i~~~~~g~~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~-------~~~~~~~~ 103 (389)
T PF02450_consen 34 YSNDPGVEIRVPGFGGTSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRL---S-------PAERDEYF 103 (389)
T ss_pred eecCCCceeecCCCCceeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhh---c-------hhhHHHHH
Confidence 334567777766665322333322 22222228999999999877752 22 67771 1 11344666
Q ss_pred HHHHHHHHHhcC-CCCcEEEEEeChHHHHHHHHHHhCCC------ccceEEEEccCCCC
Q 017221 137 GDVIALLDAVAA-DQEKVFVVGHDWGALIAWYLCLFRPD------RVKALVNLSVVFNP 188 (375)
Q Consensus 137 ~d~~~~l~~l~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~lil~~~~~~~ 188 (375)
..+.++++.... ..++++|+||||||.++..+....+. .|+++|.++++...
T Consensus 104 ~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 104 TKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 677777766532 25699999999999999999988753 49999999987653
No 167
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.32 E-value=1.8e-06 Score=78.33 Aligned_cols=107 Identities=18% Similarity=0.066 Sum_probs=69.4
Q ss_pred CCEEEEEcCCC---CChhhHHHHHHHHHhC--CcEEEEeCCC-C---CCCCCCCCCCcc---ccHhHHHHHHHHHHHHhc
Q 017221 80 GPLILFIHGFP---LLWYSWRHQITALASL--GYRAVAPDLR-G---YGDTDAPAEVPS---YTCLHLVGDVIALLDAVA 147 (375)
Q Consensus 80 ~~~il~~hG~~---~~~~~~~~~~~~L~~~--g~~v~~~d~~-G---~G~S~~~~~~~~---~~~~~~~~d~~~~l~~l~ 147 (375)
.|+||++||++ ++...+ ....|... |+.|+.+++| | +..+........ .+.....+.+.+.++..+
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 58999999975 222222 22334433 3899999999 3 332221111112 233344455556666677
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhC--CCccceEEEEccCCCC
Q 017221 148 ADQEKVFVVGHDWGALIAWYLCLFR--PDRVKALVNLSVVFNP 188 (375)
Q Consensus 148 ~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~lil~~~~~~~ 188 (375)
.++++|.|+|+|.||..+..++... +..++++|+.++....
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 7888999999999999998888762 3468999999876653
No 168
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=5.7e-06 Score=64.61 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=48.5
Q ss_pred EEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCC-CccChhHHHHHHHHHHhh
Q 017221 311 VKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFI-NEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 311 ~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 374 (375)
+.++.+++|..+|...... +++..|++ ++..+++ ||.. ++.+.+.+.+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~------lQ~~WPg~-eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS------LQEIWPGC-EVRYLEG-GHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHH------HHHhCCCC-EEEEeec-CceeeeehhchHHHHHHHHHHHh
Confidence 6788899999999987766 78999999 9999985 9986 778889999999888765
No 169
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.30 E-value=4.7e-05 Score=64.21 Aligned_cols=105 Identities=13% Similarity=0.125 Sum_probs=65.8
Q ss_pred CCEEEEEcCCCCChhhH-------HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCc
Q 017221 80 GPLILFIHGFPLLWYSW-------RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEK 152 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~-------~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 152 (375)
.|+||++||+|-.-... ..+...|. ...+++.|+.-...-.... .-..-+.+.++-...+++..|-+ +
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~-~yPtQL~qlv~~Y~~Lv~~~G~~--n 196 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGH-KYPTQLRQLVATYDYLVESEGNK--N 196 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCC-cCchHHHHHHHHHHHHHhccCCC--e
Confidence 58999999988432211 22223333 3688999986433000000 01234455555555666555555 9
Q ss_pred EEEEEeChHHHHHHHHHHhCC-----CccceEEEEccCCCCC
Q 017221 153 VFVVGHDWGALIAWYLCLFRP-----DRVKALVNLSVVFNPR 189 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~~ 189 (375)
|+|+|-|.||.+++.+..... ..-+++|+++|-..+.
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999988876521 1257999999988764
No 170
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.28 E-value=1.1e-05 Score=68.08 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=32.6
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 151 EKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
-+++++|+|.||++|...|.-.|..++++|=-++...+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 38999999999999999999999999999866655543
No 171
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.24 E-value=1.2e-05 Score=70.87 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=85.0
Q ss_pred eEEEECCeEEEeee--------cCCCCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCC---CCC---C
Q 017221 63 KVVNVNGINMHVAE--------KGQGPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTD---APA---E 126 (375)
Q Consensus 63 ~~~~~~g~~l~~~~--------~g~~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~---~~~---~ 126 (375)
.+.+.||..+...+ .|+.|.+|..+|.-+-+. .|..--..|.++|+.....|.||-|.-. ... .
T Consensus 445 ~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~la 524 (712)
T KOG2237|consen 445 EVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLA 524 (712)
T ss_pred EEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchh
Confidence 34455777765322 134677776666433221 2322222355689999999999976432 111 1
Q ss_pred CccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 127 VPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 127 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
-...+++|+..-++.+++.--..+.+..+.|.|.||.++..++-.+|+.+.++|+-.|....
T Consensus 525 kKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 525 KKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred hhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 13457777777777777664445668999999999999999999999999999988887764
No 172
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.23 E-value=2.3e-05 Score=66.30 Aligned_cols=60 Identities=15% Similarity=0.267 Sum_probs=48.9
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
++++|.++|.|..|.+..++...-++ ..+|+.+.+..+|+++|..-. .++.+.+..|++.
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~------d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYY------DKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHH------hhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 78999999999999999999887654 556666689999999999865 6666777777653
No 173
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.21 E-value=6e-05 Score=67.08 Aligned_cols=123 Identities=15% Similarity=0.224 Sum_probs=87.5
Q ss_pred ECCeEEE----eee----cCCCCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCC------CCCCccc
Q 017221 67 VNGINMH----VAE----KGQGPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDA------PAEVPSY 130 (375)
Q Consensus 67 ~~g~~l~----~~~----~g~~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~------~~~~~~~ 130 (375)
.||+++. |.. .|++|.+|..-|.=|.+. .|....-.|.++|+-....-.||-|.-.. ....+..
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~N 506 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKN 506 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccc
Confidence 5777765 332 245678877777543322 33333445778898777777788664321 1111456
Q ss_pred cHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 131 TCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 131 ~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
++.|+++-...+++.--..+++++++|-|.||++.-..+...|+.++++|+-.|..++.
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVL 565 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchh
Confidence 88888888888887755556799999999999999999999999999999999887753
No 174
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.20 E-value=1.1e-05 Score=66.58 Aligned_cols=107 Identities=14% Similarity=0.164 Sum_probs=69.4
Q ss_pred CCEEEEEcCCCCChhh-HHHHHHHHHhCC--cEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC--CCcEE
Q 017221 80 GPLILFIHGFPLLWYS-WRHQITALASLG--YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD--QEKVF 154 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~-~~~~~~~L~~~g--~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~ 154 (375)
+..+||+||+..+-++ -...++-..+.| ...+.+.||..|.--... ....+...-..+++.+++.+..+ -++|+
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn-~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYN-YDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecc-cchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 5689999999865442 233444444433 567888899766532221 12234445555666666666433 23899
Q ss_pred EEEeChHHHHHHHHHHh--------CCCccceEEEEccCCC
Q 017221 155 VVGHDWGALIAWYLCLF--------RPDRVKALVNLSVVFN 187 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~--------~p~~v~~lil~~~~~~ 187 (375)
|++||||.+++++.... .+.+|+-+|+-+|-..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999988765 2346888888887654
No 175
>PLN02606 palmitoyl-protein thioesterase
Probab=98.19 E-value=2.2e-05 Score=63.83 Aligned_cols=103 Identities=17% Similarity=0.116 Sum_probs=69.0
Q ss_pred CCEEEEEcCCC--CChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 80 GPLILFIHGFP--LLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 80 ~~~il~~hG~~--~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
..+||+.||+| ++...+..+.+.+.+. |+.+.++. .|-|.. .. -.....++++.+-+.++....-.+-++++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s-~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DS-LFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cc-cccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 35888899999 5555777787777533 55555554 332221 11 11244555665555555422223479999
Q ss_pred EeChHHHHHHHHHHhCCC--ccceEEEEccCCC
Q 017221 157 GHDWGALIAWYLCLFRPD--RVKALVNLSVVFN 187 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 187 (375)
|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999987 4999999997654
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.18 E-value=1.4e-05 Score=72.16 Aligned_cols=102 Identities=19% Similarity=0.232 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHh----------------CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHH
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALAS----------------LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALL 143 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~----------------~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l 143 (375)
|-+|+|++|..|+-..-+.++..... ..|+.+++|+-+ .-......+..++++-+.+.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHHH
Confidence 55999999999988777666654431 125666666542 111112345666666666665
Q ss_pred HHh----cC-------CCCcEEEEEeChHHHHHHHHHHhC---CCccceEEEEccCC
Q 017221 144 DAV----AA-------DQEKVFVVGHDWGALIAWYLCLFR---PDRVKALVNLSVVF 186 (375)
Q Consensus 144 ~~l----~~-------~~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~lil~~~~~ 186 (375)
+.. +. .++.++++||||||++|..++..- ++.|.-+|..+++-
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 543 11 134699999999999998777542 34466666666544
No 177
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.17 E-value=1.2e-05 Score=60.63 Aligned_cols=110 Identities=25% Similarity=0.390 Sum_probs=71.2
Q ss_pred CCEEEEEcCCCCChhhHHH---HHHHHHhCCcEEEEeCC--CCC---CCCCCCC-------------CC--ccc-cHhHH
Q 017221 80 GPLILFIHGFPLLWYSWRH---QITALASLGYRAVAPDL--RGY---GDTDAPA-------------EV--PSY-TCLHL 135 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~---~~~~L~~~g~~v~~~d~--~G~---G~S~~~~-------------~~--~~~-~~~~~ 135 (375)
-|++.++.|..++.+.+-. +-..-.++|+.|+.+|- ||. |.++.-. ++ ..+ -++-.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4899999999988776522 22233456999999995 443 2221100 00 001 11223
Q ss_pred HHHHHHHHHHh--cCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 136 VGDVIALLDAV--AADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 136 ~~d~~~~l~~l--~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
.+++.+++..- .++..++.+.||||||.=|+..+.+.|++.+++-..+|...+.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 33444444421 2345689999999999999999999999999998888877654
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.15 E-value=5.2e-05 Score=63.46 Aligned_cols=119 Identities=20% Similarity=0.191 Sum_probs=85.4
Q ss_pred CeEEEeeecC----CC-CEEEEEcCCCCChhhHHH---HHHHHHh-CCcEEEEeCCCCCCCCCCCCC--------Ccccc
Q 017221 69 GINMHVAEKG----QG-PLILFIHGFPLLWYSWRH---QITALAS-LGYRAVAPDLRGYGDTDAPAE--------VPSYT 131 (375)
Q Consensus 69 g~~l~~~~~g----~~-~~il~~hG~~~~~~~~~~---~~~~L~~-~g~~v~~~d~~G~G~S~~~~~--------~~~~~ 131 (375)
....+|.... ++ .+|+|.-|.-|+.+.+.. ++-.++. .+.-++..++|-+|+|-+-.+ ....+
T Consensus 64 tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLt 143 (492)
T KOG2183|consen 64 TFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLT 143 (492)
T ss_pred ceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhcccc
Confidence 3345555443 23 688889998888776643 3333433 367899999999999964331 12346
Q ss_pred HhHHHHHHHHHHHHhcCC----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 132 CLHLVGDVIALLDAVAAD----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
.++..+|...++..++.+ ..+++.+|.|+||++|..+=.+||..+.|.+.-+++..
T Consensus 144 seQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 144 SEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 677777888888877643 45899999999999999999999998888876665543
No 179
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.15 E-value=3e-05 Score=61.02 Aligned_cols=100 Identities=20% Similarity=0.206 Sum_probs=72.2
Q ss_pred CEEEEEcCCCCChhh--HHHHHHHHHhC-CcEEEEeCCCCCC--CCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEE
Q 017221 81 PLILFIHGFPLLWYS--WRHQITALASL-GYRAVAPDLRGYG--DTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFV 155 (375)
Q Consensus 81 ~~il~~hG~~~~~~~--~~~~~~~L~~~-g~~v~~~d~~G~G--~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l 155 (375)
.++|++||.+.+... ...+.+.+.+. |..|++.|. |-| .| ......++++.+.+.++....-++-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s------~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDS------SLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchh------hhccHHHHHHHHHHHHhcchhccCceEE
Confidence 578889999977665 67777777765 888999884 444 22 2234556666666666543333568999
Q ss_pred EEeChHHHHHHHHHHhCCC-ccceEEEEccCCC
Q 017221 156 VGHDWGALIAWYLCLFRPD-RVKALVNLSVVFN 187 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~ 187 (375)
+|.|.||.++-.++...++ .|+.+|.++++-.
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999999988654 5999999887644
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.14 E-value=6.9e-06 Score=70.64 Aligned_cols=122 Identities=20% Similarity=0.147 Sum_probs=80.8
Q ss_pred EEECCeEEEeeecC----CCCEEEEEcCCC---CChhhHHHHHHHHHhCC-cEEEEeCCCC--CCC---C-----CCCC-
Q 017221 65 VNVNGINMHVAEKG----QGPLILFIHGFP---LLWYSWRHQITALASLG-YRAVAPDLRG--YGD---T-----DAPA- 125 (375)
Q Consensus 65 ~~~~g~~l~~~~~g----~~~~il~~hG~~---~~~~~~~~~~~~L~~~g-~~v~~~d~~G--~G~---S-----~~~~- 125 (375)
-+-|-..|+.+... +.|++|++||++ |+.....+--..|+++| +-|+.+++|= +|. | +...
T Consensus 75 ~sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 75 GSEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred ccccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccc
Confidence 34466666655433 259999999975 33333233345788887 9999999872 111 1 1100
Q ss_pred CCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCC---ccceEEEEccCCC
Q 017221 126 EVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPD---RVKALVNLSVVFN 187 (375)
Q Consensus 126 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~ 187 (375)
+....+.---.+.+.+-|++.|.++++|.|+|+|.||+.++.+.+. |. .++++|+.++...
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 1112233334457778888889998999999999999988887764 53 4788888888775
No 181
>COG3150 Predicted esterase [General function prediction only]
Probab=98.12 E-value=1.6e-05 Score=57.64 Aligned_cols=91 Identities=15% Similarity=0.239 Sum_probs=65.3
Q ss_pred EEEEcCCCCChhhHHHHH--HHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 83 ILFIHGFPLLWYSWRHQI--TALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~--~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
||.+||+.++..+..... +.+... .|-.+.|... ...+..+.++.++.++...+.+ ...++|-|+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~---l~h~p~~a~~ele~~i~~~~~~--~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPH---LPHDPQQALKELEKAVQELGDE--SPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCC---CCCCHHHHHHHHHHHHHHcCCC--CceEEeecc
Confidence 899999999888765432 223332 2222333222 2357888999999999998877 799999999
Q ss_pred HHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 161 GALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 161 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
||+.|.+++.++. ++++ +++|...+.
T Consensus 69 GGY~At~l~~~~G--irav-~~NPav~P~ 94 (191)
T COG3150 69 GGYYATWLGFLCG--IRAV-VFNPAVRPY 94 (191)
T ss_pred hHHHHHHHHHHhC--Chhh-hcCCCcCch
Confidence 9999999999985 5554 478777653
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.05 E-value=6.5e-05 Score=61.22 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=68.4
Q ss_pred CEEEEEcCCCCChh--hHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 81 PLILFIHGFPLLWY--SWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 81 ~~il~~hG~~~~~~--~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
.++|+.||+|.+.. ....+.+.+.+. |..+.++.. |.+.... ......++++.+-+.++....-.+-++++|
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s--~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDS--WLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcccc--ceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 47888999996543 445555555442 666666643 3332111 233556666666666555322234799999
Q ss_pred eChHHHHHHHHHHhCCC--ccceEEEEccCCC
Q 017221 158 HDWGALIAWYLCLFRPD--RVKALVNLSVVFN 187 (375)
Q Consensus 158 ~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 187 (375)
+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999987 5999999997654
No 183
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.05 E-value=4.4e-05 Score=67.08 Aligned_cols=126 Identities=16% Similarity=0.115 Sum_probs=84.2
Q ss_pred eeEEEECCeEEEeeecC------CCCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCC------CCCC
Q 017221 62 HKVVNVNGINMHVAEKG------QGPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDA------PAEV 127 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~g------~~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~------~~~~ 127 (375)
...++-||.+|.|...+ +.|++|+--|+-.-+. .|......+.++|...+..+.||-|+=.. ....
T Consensus 397 ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~n 476 (648)
T COG1505 397 FFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKEN 476 (648)
T ss_pred EEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhc
Confidence 34456799999987763 2577776665432222 34555566677888888889999775321 0111
Q ss_pred ccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 128 PSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 128 ~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
....++|++.-.+++++.---.++++.+.|-|-||.+.-.+..++|+.+.++|.-.|..+
T Consensus 477 rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 334555555555555554222366899999999999999999999999988886666543
No 184
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.92 E-value=0.0021 Score=54.54 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=49.0
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCcc------------------ccccCC-ceeEEEecCCCCCCCccChhHHHHHH
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGF------------------KKAVPL-LEEVIVMEGVGHFINEEKPDEVNKHI 368 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i 368 (375)
.++||+..|+.|.+|+....+.|+..-.. .+...+ . ++..+.+|||+.. .+|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~l-tf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKM-TFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcc-eEEEEcCCCCCCC-cCHHHHHHHH
Confidence 47999999999999998777776654221 111122 4 6677779999996 5999999999
Q ss_pred HHHHhh
Q 017221 369 YNFFQK 374 (375)
Q Consensus 369 ~~fl~~ 374 (375)
..|++.
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999864
No 185
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.91 E-value=2.2e-05 Score=72.29 Aligned_cols=120 Identities=18% Similarity=0.118 Sum_probs=67.7
Q ss_pred CCeEEEeeecC------CCCEEEEEcCCC---CCh-hhHHHHHHHHHhCCcEEEEeCCC----CCCCCCCCCCC-ccccH
Q 017221 68 NGINMHVAEKG------QGPLILFIHGFP---LLW-YSWRHQITALASLGYRAVAPDLR----GYGDTDAPAEV-PSYTC 132 (375)
Q Consensus 68 ~g~~l~~~~~g------~~~~il~~hG~~---~~~-~~~~~~~~~L~~~g~~v~~~d~~----G~G~S~~~~~~-~~~~~ 132 (375)
|=..|.+.... +.|++|++||++ |+. .....-...+.+++.-||++++| |+-.+...... ..+-+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 44555544432 138999999976 223 12222334455678999999998 33222111111 23333
Q ss_pred hH---HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC--CCccceEEEEccCCC
Q 017221 133 LH---LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR--PDRVKALVNLSVVFN 187 (375)
Q Consensus 133 ~~---~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~lil~~~~~~ 187 (375)
.| ..+.+.+-|...|.++++|.|+|||.||..+......- ...++++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 33 34456666666777778999999999998887777662 246999999998554
No 186
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.91 E-value=2.1e-05 Score=63.40 Aligned_cols=106 Identities=13% Similarity=0.020 Sum_probs=54.8
Q ss_pred CEEEEEcCCCCCh---hhHHHHHHHHHhC--CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEE
Q 017221 81 PLILFIHGFPLLW---YSWRHQITALASL--GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFV 155 (375)
Q Consensus 81 ~~il~~hG~~~~~---~~~~~~~~~L~~~--g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l 155 (375)
.+||+.||+|.+. ..+..+.+.+.+. |..|..++.- -+.++.....-.....+.++.+.+.++.-..-.+-+++
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~ 84 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNA 84 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceee
Confidence 4899999999643 3455554444432 7778888753 22111000000123445555555555442211247999
Q ss_pred EEeChHHHHHHHHHHhCCC-ccceEEEEccCCC
Q 017221 156 VGHDWGALIAWYLCLFRPD-RVKALVNLSVVFN 187 (375)
Q Consensus 156 ~G~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~ 187 (375)
+|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 85 IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 85 IGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999865 6999999997654
No 187
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.91 E-value=1.6e-05 Score=54.68 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=52.5
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
..|+|++.++.|+.+|.+.... +++.++++ +++..++.||......-.-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~------~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARA------MAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHH------HHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5899999999999999988876 78889998 999999999999865557778888899863
No 188
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=0.00011 Score=61.84 Aligned_cols=65 Identities=17% Similarity=0.325 Sum_probs=47.9
Q ss_pred ccc-ccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChh---HHHHHHHHHHhhC
Q 017221 306 QIK-VPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPD---EVNKHIYNFFQKF 375 (375)
Q Consensus 306 ~~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~~~ 375 (375)
++. +|+++++|.+|..+|.......+.. .... .. +...+++++|......+. +..+.+.+|+.++
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~--~~~~--~~-~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEA--ARER--PK-KLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhh--hccC--Cc-eEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 455 7999999999999999988876532 1111 33 778888889998754433 7788888888763
No 189
>COG0627 Predicted esterase [General function prediction only]
Probab=97.89 E-value=6.1e-05 Score=62.79 Aligned_cols=112 Identities=24% Similarity=0.315 Sum_probs=70.5
Q ss_pred CCEEEEEcCCCCChhhH---HHHHHHHHhCCcEEEEeCC--------------CCCCCCCCCCCCc------cccHhH-H
Q 017221 80 GPLILFIHGFPLLWYSW---RHQITALASLGYRAVAPDL--------------RGYGDTDAPAEVP------SYTCLH-L 135 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~---~~~~~~L~~~g~~v~~~d~--------------~G~G~S~~~~~~~------~~~~~~-~ 135 (375)
-|+++++||..++...+ ..+-......|+.++++|- .|-+.|-..+... .+.+++ +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 47888888888765333 1222333445777777632 3444443222111 144443 3
Q ss_pred HHHHHHHHHHhcC-CC--CcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCCCC
Q 017221 136 VGDVIALLDAVAA-DQ--EKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPRNP 191 (375)
Q Consensus 136 ~~d~~~~l~~l~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~ 191 (375)
..++-+.+++... .. ++..++||||||.=|+.+|+++|++++.+..++|...+...
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~ 192 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSP 192 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccc
Confidence 3455544443332 32 27899999999999999999999999999999998887543
No 190
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.80 E-value=0.00092 Score=56.16 Aligned_cols=86 Identities=20% Similarity=0.150 Sum_probs=61.2
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC--CCCcEEEEEeC
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA--DQEKVFVVGHD 159 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~~~~l~G~S 159 (375)
.-||+.|-||-...=..+.+.|.++|+.|+.+|-.-|-.| ..+.++.++|+..+++.... +..++.|+|+|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS-------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc-------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4566666665333335678889999999999995533333 23667888888888877643 23499999999
Q ss_pred hHHHHHHHHHHhCCC
Q 017221 160 WGALIAWYLCLFRPD 174 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~ 174 (375)
+|+-+.-....+.|.
T Consensus 335 fGADvlP~~~n~L~~ 349 (456)
T COG3946 335 FGADVLPFAYNRLPP 349 (456)
T ss_pred ccchhhHHHHHhCCH
Confidence 999887766666553
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.78 E-value=0.0018 Score=51.20 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=60.0
Q ss_pred CCEEEEEcCCC---CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHH----HHHHHHHHhc----C
Q 017221 80 GPLILFIHGFP---LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVG----DVIALLDAVA----A 148 (375)
Q Consensus 80 ~~~il~~hG~~---~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~----d~~~~l~~l~----~ 148 (375)
.-+|=|+-|.. ...-.|+.+.+.|+++||.|++.-+.- ..+-...++ .....++.+. .
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33566666632 233478999999999999999987641 111112222 2222222222 2
Q ss_pred C--CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 149 D--QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 149 ~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
. .-+++-+|||+|+.+-+.+...++..-++-|+++-
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2 23678899999999999988887666677777764
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.71 E-value=0.0007 Score=58.51 Aligned_cols=111 Identities=17% Similarity=0.252 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCCCChhhHH-----HHHHHHHhCCcEEEEeCCCCCCCCCCCCC-----CccccHhHHHHHHHHHHHHhcC
Q 017221 79 QGPLILFIHGFPLLWYSWR-----HQITALASLGYRAVAPDLRGYGDTDAPAE-----VPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~-----~~~~~L~~~g~~v~~~d~~G~G~S~~~~~-----~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
.+|..|++-|=|.-...|- .+...-.+.|-.|+..++|-+|.|....+ ....+..+...|+.++++.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 3788888888554333331 12222233489999999999999865442 2446788999999999999875
Q ss_pred C-----CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 149 D-----QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 149 ~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
+ +.+.+..|.|+-|.++..+=.++|+.+.|.|..+++....
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAK 210 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEE
Confidence 4 2389999999999999999999999999999888877643
No 193
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.67 E-value=0.00019 Score=58.03 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=61.1
Q ss_pred CCEEEEEcCCC--CChhhHHHHHHHHHhC----CcEEEEeCCCCCCCCCCCCCC--ccccHhHHHHHHHHHHHHhcC---
Q 017221 80 GPLILFIHGFP--LLWYSWRHQITALASL----GYRAVAPDLRGYGDTDAPAEV--PSYTCLHLVGDVIALLDAVAA--- 148 (375)
Q Consensus 80 ~~~il~~hG~~--~~~~~~~~~~~~L~~~----g~~v~~~d~~G~G~S~~~~~~--~~~~~~~~~~d~~~~l~~l~~--- 148 (375)
-|++++.||-. .+...+ ...+.|... ...++.+|.----. +.... .......++.++.=.++..-.
T Consensus 98 ~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~--R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKK--RREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred ccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHH--HHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 58999999832 122222 233444433 35566666542000 00000 112233333344334433211
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
....-+|.|-|+||.+++..+.+||+.+-.++..+|....
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 1335689999999999999999999999999999887653
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.53 E-value=0.00022 Score=63.30 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=59.5
Q ss_pred hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC-C-CCcEEEEEeChHHHHHHHHHHhC
Q 017221 95 SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA-D-QEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~-~-~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
.|..+++.|.+.||. -.|+.|..+--+........-+++...+..+++.... . .++++|+||||||.+++.+....
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 568999999999986 3444443332221100112335566667777766532 2 35999999999999999987632
Q ss_pred C---------------CccceEEEEccCCC
Q 017221 173 P---------------DRVKALVNLSVVFN 187 (375)
Q Consensus 173 p---------------~~v~~lil~~~~~~ 187 (375)
. ..|++.|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 1 24899999998754
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.42 E-value=0.0023 Score=48.76 Aligned_cols=104 Identities=20% Similarity=0.258 Sum_probs=61.6
Q ss_pred CCEEEEEcCCCC-ChhhHH---------------HHHHHHHhCCcEEEEeCCCC---CCCCCCCCCCccccHhHHHHHHH
Q 017221 80 GPLILFIHGFPL-LWYSWR---------------HQITALASLGYRAVAPDLRG---YGDTDAPAEVPSYTCLHLVGDVI 140 (375)
Q Consensus 80 ~~~il~~hG~~~-~~~~~~---------------~~~~~L~~~g~~v~~~d~~G---~G~S~~~~~~~~~~~~~~~~d~~ 140 (375)
.+.+|++||.|- -...|. ++++.-.+.||.|++.+.-- +-.+...+ . .....-++.+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np--~-kyirt~veh~~ 177 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNP--Q-KYIRTPVEHAK 177 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCc--c-hhccchHHHHH
Confidence 568999999873 223342 23444456699999987431 11121111 1 11112222222
Q ss_pred HHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCC--ccceEEEEccCC
Q 017221 141 ALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPD--RVKALVNLSVVF 186 (375)
Q Consensus 141 ~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 186 (375)
.+...+-. ..+.+.++.||+||...+.+..++|+ +|.++.+.+.+.
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 22222221 23489999999999999999999875 677777777653
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.39 E-value=0.00019 Score=61.56 Aligned_cols=86 Identities=19% Similarity=0.346 Sum_probs=57.5
Q ss_pred hHHHHHHHHHhCCcE------EEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC-C-CCcEEEEEeChHHHHHH
Q 017221 95 SWRHQITALASLGYR------AVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA-D-QEKVFVVGHDWGALIAW 166 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~------v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~-~-~~~~~l~G~S~Gg~~a~ 166 (375)
.|..+++.|..-||. -..+|+| .|.... .-.+++...+...++.... . .+|++|++|||||.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~----e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNS----EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchh---hccCCh----hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 678889999888887 4567777 222212 2233444455555544322 1 24999999999999999
Q ss_pred HHHHhCCC--------ccceEEEEccCCC
Q 017221 167 YLCLFRPD--------RVKALVNLSVVFN 187 (375)
Q Consensus 167 ~~a~~~p~--------~v~~lil~~~~~~ 187 (375)
.+...+++ .|++++.++++..
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhc
Confidence 99998876 3777777776543
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.37 E-value=0.00053 Score=51.42 Aligned_cols=56 Identities=23% Similarity=0.208 Sum_probs=39.6
Q ss_pred HhHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhCCC----ccceEEEEccCCC
Q 017221 132 CLHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFRPD----RVKALVNLSVVFN 187 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 187 (375)
...+...+...++.... ...+++++|||+||.+|..++..... ....++.++++..
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34455555666655432 23489999999999999999988754 5677777777654
No 198
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.17 E-value=0.00088 Score=53.53 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=40.7
Q ss_pred HHHHHHHHH-hcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 137 GDVIALLDA-VAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 137 ~d~~~~l~~-l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
+.+.-+++. ...+.++-.++|||+||.+++.....+|+.+...++++|...
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 334444444 334456799999999999999999999999999999999764
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.07 E-value=0.0016 Score=47.98 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
...+.+.++++.... .++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~--~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPD--YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTT--SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC--ccchhhccchHHHHHHHHHHhh
Confidence 334444444444333 4899999999999999988773
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.99 E-value=0.023 Score=43.19 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=43.0
Q ss_pred HhHHHHHHHHHHHHhcCC---CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 132 CLHLVGDVIALLDAVAAD---QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
-+.-+.++..+++.+... ..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 445566677777666432 34899999999999999988886678999999987654
No 201
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0063 Score=53.13 Aligned_cols=110 Identities=18% Similarity=0.082 Sum_probs=76.1
Q ss_pred CCEEEEEcCCCCChhhHHHHHHH-------------------HHhCCcEEEEeC-CCCCCCCCCCCCCccccHhHHHHHH
Q 017221 80 GPLILFIHGFPLLWYSWRHQITA-------------------LASLGYRAVAPD-LRGYGDTDAPAEVPSYTCLHLVGDV 139 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~-------------------L~~~g~~v~~~d-~~G~G~S~~~~~~~~~~~~~~~~d~ 139 (375)
.|.|+++.|++|.+..+-.+.+. +.+. -.++.+| .-|-|.|....+....+.....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchhH
Confidence 68999999999998887665321 1122 4789999 6789999863332455666666676
Q ss_pred HHHHHHhc-------CCCCcEEEEEeChHHHHHHHHHHhCCC---ccceEEEEccCCCCCC
Q 017221 140 IALLDAVA-------ADQEKVFVVGHDWGALIAWYLCLFRPD---RVKALVNLSVVFNPRN 190 (375)
Q Consensus 140 ~~~l~~l~-------~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~ 190 (375)
..+.+..- ....+.+|+|-|+||.-+..+|...-+ ..++++++.+......
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 66665542 112389999999999999888876544 3677777776655433
No 202
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.92 E-value=0.16 Score=41.26 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=74.1
Q ss_pred CCEEEEEcCCCCChh-hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWY-SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~-~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
.|.|+++-.+.|+.. ..+...+.|... ..|+.-|+-..-.-.-.. ..++++|+++-+.+.+..+|.+ .++++.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~---~hv~aV 176 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD---AHVMAV 176 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC---CcEEEE
Confidence 467888887777654 345666777665 789999987543333222 5789999999999999999886 667777
Q ss_pred ChHH-----HHHHHHHHhCCCccceEEEEccCCCCC
Q 017221 159 DWGA-----LIAWYLCLFRPDRVKALVNLSVVFNPR 189 (375)
Q Consensus 159 S~Gg-----~~a~~~a~~~p~~v~~lil~~~~~~~~ 189 (375)
|.-+ .++++.+...|..-..+++++++....
T Consensus 177 CQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 177 CQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred ecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 6544 445555555677788899999887743
No 203
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.84 E-value=0.003 Score=43.83 Aligned_cols=42 Identities=19% Similarity=0.466 Sum_probs=28.1
Q ss_pred ccceeEEEECCeEEEeeecCC----CCEEEEEcCCCCChhhHHHHH
Q 017221 59 DIQHKVVNVNGINMHVAEKGQ----GPLILFIHGFPLLWYSWRHQI 100 (375)
Q Consensus 59 ~~~~~~~~~~g~~l~~~~~g~----~~~il~~hG~~~~~~~~~~~~ 100 (375)
..++..++++|..||+....+ ..+|||+||++|+-..|..++
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 566888999999999876532 359999999999988876653
No 204
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.77 E-value=0.0047 Score=49.15 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=31.6
Q ss_pred cEEEEEeChHHHHHHHHHHhC----CCccceEEEEccCCCC
Q 017221 152 KVFVVGHDWGALIAWYLCLFR----PDRVKALVNLSVVFNP 188 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~----p~~v~~lil~~~~~~~ 188 (375)
++.+.|||.||.+|..++... .++|.+++..+++...
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 699999999999999999884 3578899988887654
No 205
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.72 E-value=0.0045 Score=52.58 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=82.4
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC-CCccccHhHHHHHHHHHHHHhcCC-CCcEEEE
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPA-EVPSYTCLHLVGDVIALLDAVAAD-QEKVFVV 156 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~-~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~l~ 156 (375)
+.|+|+..-|.+.+..-.+.-...|.+ -+-+.+++|-+|.|...+ +....++.+-+.|.+++++.++.- +++.+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 368999999988654322221222333 477899999999997655 445679999999999999998642 4588999
Q ss_pred EeChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 157 GHDWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
|.|=||+.++.+=.-||+.|++.|.-.++.+
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999888889999999998776654
No 206
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.67 E-value=0.13 Score=43.57 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=49.9
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc-cChhHHHHHHHHHHhh
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE-EKPDEVNKHIYNFFQK 374 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 374 (375)
..+.+.+.+..|.++|.+..+++++. ..+..-+. ..+-+.++-|..++ ..|....+...+|+++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~--~~~~g~~v-~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIAL--RREKGVNV-KSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHH--HHhcCceE-EEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 56889999999999999998887533 44444454 55667788999855 5789999999999975
No 207
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.65 E-value=0.024 Score=41.24 Aligned_cols=83 Identities=16% Similarity=0.096 Sum_probs=55.8
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
..||.+-|+|..+.....++ +.+..--++++|++..... .++. . .+.+.++.+||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld--------fDfs-------------A--y~hirlvAwSM 66 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD--------FDFS-------------A--YRHIRLVAWSM 66 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc--------cchh-------------h--hhhhhhhhhhH
Confidence 37888899998887765554 2233124678888743321 1110 0 12678999999
Q ss_pred HHHHHHHHHHhCCCccceEEEEccCCCCCC
Q 017221 161 GALIAWYLCLFRPDRVKALVNLSVVFNPRN 190 (375)
Q Consensus 161 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 190 (375)
|-.+|-++....+ +++.+.+++...+-+
T Consensus 67 GVwvAeR~lqg~~--lksatAiNGTgLpcD 94 (214)
T COG2830 67 GVWVAERVLQGIR--LKSATAINGTGLPCD 94 (214)
T ss_pred HHHHHHHHHhhcc--ccceeeecCCCCCcc
Confidence 9999999998775 788888887665433
No 208
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.58 E-value=0.0072 Score=55.88 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=70.3
Q ss_pred ECCeEEEeeecC-C----CCEEEEEcCCCC---ChhhH--HHHHHHHHhCCcEEEEeCCC----CC---CCCCCCCCCcc
Q 017221 67 VNGINMHVAEKG-Q----GPLILFIHGFPL---LWYSW--RHQITALASLGYRAVAPDLR----GY---GDTDAPAEVPS 129 (375)
Q Consensus 67 ~~g~~l~~~~~g-~----~~~il~~hG~~~---~~~~~--~~~~~~L~~~g~~v~~~d~~----G~---G~S~~~~~~~~ 129 (375)
-|-..+++.... . -|++|++||++. +...+ ......+..+..-|+.+.+| |+ |.+..+ ..
T Consensus 94 EDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~---gN 170 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAP---GN 170 (545)
T ss_pred CCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCC---Cc
Confidence 455556544332 1 489999999873 22222 11222333445778888887 22 222222 33
Q ss_pred ccHhHH---HHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC--CCccceEEEEccCCC
Q 017221 130 YTCLHL---VGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR--PDRVKALVNLSVVFN 187 (375)
Q Consensus 130 ~~~~~~---~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~lil~~~~~~ 187 (375)
+.+.|+ .+.+.+-+...|.++++|.++|||.||..+..+...- ...+.++|..++...
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 334333 4456666677777788999999999999987766542 134677777766544
No 209
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.19 E-value=0.0096 Score=48.04 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=27.0
Q ss_pred HhHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHhC
Q 017221 132 CLHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
+..+..++...++.+.. ...++++.|||+||.+|..++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 33444444444443322 234899999999999999888764
No 210
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.17 E-value=0.052 Score=45.45 Aligned_cols=59 Identities=8% Similarity=0.149 Sum_probs=44.7
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
++..|-.++.+..|.+.+++.+.- .-..+|+.+-+..+|+..|...- .-+.+.+..|+.
T Consensus 327 RLalpKyivnaSgDdff~pDsa~l------Yyd~LPG~kaLrmvPN~~H~~~n---~~i~esl~~fln 385 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANL------YYDDLPGEKALRMVPNDPHNLIN---QFIKESLEPFLN 385 (507)
T ss_pred hccccceeecccCCcccCCCccce------eeccCCCceeeeeCCCCcchhhH---HHHHHHHHHHHH
Confidence 778999999999999999988765 45778888789999999998743 233344444443
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.00 E-value=0.033 Score=42.78 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=45.9
Q ss_pred cEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHh--C----CCccceE
Q 017221 108 YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLF--R----PDRVKAL 179 (375)
Q Consensus 108 ~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~--~----p~~v~~l 179 (375)
..+..+++|-..... . ...+...=+.++...++.... ...+++|+|+|.|+.++..++.. . .++|.++
T Consensus 40 ~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 556666776322111 0 123455555566666655432 24589999999999999999877 2 3579999
Q ss_pred EEEccCCC
Q 017221 180 VNLSVVFN 187 (375)
Q Consensus 180 il~~~~~~ 187 (375)
++++-+..
T Consensus 116 vlfGdP~~ 123 (179)
T PF01083_consen 116 VLFGDPRR 123 (179)
T ss_dssp EEES-TTT
T ss_pred EEecCCcc
Confidence 99986654
No 212
>PLN00413 triacylglycerol lipase
Probab=95.97 E-value=0.025 Score=49.45 Aligned_cols=51 Identities=14% Similarity=0.298 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh---C-----CCccceEEEEccCC
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF---R-----PDRVKALVNLSVVF 186 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~---~-----p~~v~~lil~~~~~ 186 (375)
++.+.+.++++..... ++++.|||+||.+|..+|.. + ..++.+++..+.+-
T Consensus 269 ~i~~~Lk~ll~~~p~~--kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTS--KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCC--eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 4555666666554333 89999999999999998853 1 12345566666543
No 213
>PLN02162 triacylglycerol lipase
Probab=95.93 E-value=0.026 Score=49.25 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHH
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~ 170 (375)
+.+.+.++++... ..++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 3344444444432 238999999999999998765
No 214
>PLN02571 triacylglycerol lipase
Probab=95.77 E-value=0.018 Score=49.80 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 133 LHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+++..++..+++.......++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 455566666666543332368999999999999998875
No 215
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.75 E-value=0.029 Score=41.43 Aligned_cols=114 Identities=16% Similarity=0.200 Sum_probs=64.2
Q ss_pred CeEEEeeecCC-CCEEEEEcCCCCChhhHHH--HHHHHH---hCC-cEEEEeCCCCCCCCCCCCCCccccHhHHHHH---
Q 017221 69 GINMHVAEKGQ-GPLILFIHGFPLLWYSWRH--QITALA---SLG-YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGD--- 138 (375)
Q Consensus 69 g~~l~~~~~g~-~~~il~~hG~~~~~~~~~~--~~~~L~---~~g-~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d--- 138 (375)
+..+.+...|. +.+||+++-.++.-..|.. .+..|+ +.| ...++++ |...-+.-. ......+.++-
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a--~h~~~adr~~rH~A 89 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLA--THKNAADRAERHRA 89 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhh--hcCCHHHHHHHHHH
Confidence 44555666665 5556666666655555543 223332 333 3445544 322111111 11122222222
Q ss_pred HHH-HHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCCCC
Q 017221 139 VIA-LLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVFNP 188 (375)
Q Consensus 139 ~~~-~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 188 (375)
..+ ++++.-.. +..+-|.||||..|..+.-++|+.+.++|.+++....
T Consensus 90 yerYv~eEalpg--s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPG--STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCC--CccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 222 22222223 6778899999999999999999999999999987754
No 216
>PLN02408 phospholipase A1
Probab=95.56 E-value=0.024 Score=48.18 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
..+++..+++.......+|++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 44555555555443333699999999999999988764
No 217
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.48 E-value=0.037 Score=43.01 Aligned_cols=69 Identities=13% Similarity=0.065 Sum_probs=42.0
Q ss_pred HHHhCCcEEEEeCCCCCCCCCCC----CC---CccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 102 ALASLGYRAVAPDLRGYGDTDAP----AE---VPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 102 ~L~~~g~~v~~~d~~G~G~S~~~----~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
.+... .+|++|=+|=....... .+ .....+.|..+....++++.+. .++++|+|||.|+.+..++...+
T Consensus 41 ~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~-GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNN-GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCC-CCCEEEEEeChHHHHHHHHHHHH
Confidence 34444 68888888754322211 00 0122344444455555555533 35899999999999999999875
No 218
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.42 E-value=0.56 Score=41.33 Aligned_cols=107 Identities=15% Similarity=0.136 Sum_probs=71.5
Q ss_pred EeeecCC--CCEEEEEcCCCCChhhH--HHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC
Q 017221 73 HVAEKGQ--GPLILFIHGFPLLWYSW--RHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 73 ~~~~~g~--~~~il~~hG~~~~~~~~--~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
+|...|+ .|..|.+-|+-. .+-+ ..+++.|..- -.+.-|.|=-|.+-.... ..-...+.+-+.+.++.|+-
T Consensus 280 yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P--fLL~~DpRleGGaFYlGs--~eyE~~I~~~I~~~L~~LgF 354 (511)
T TIGR03712 280 YYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGAP--FLLIGDPRLEGGAFYLGS--DEYEQGIINVIQEKLDYLGF 354 (511)
T ss_pred EecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCCC--eEEeeccccccceeeeCc--HHHHHHHHHHHHHHHHHhCC
Confidence 3455565 467888888764 3333 2345555332 345568887777765442 22255677788889999998
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 149 DQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 149 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
+.+..++-|-|||..-|+.+++... -.++|+--|-.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 8778999999999999999999863 34555444443
No 219
>PLN02454 triacylglycerol lipase
Probab=95.25 E-value=0.039 Score=47.73 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=18.0
Q ss_pred cEEEEEeChHHHHHHHHHHh
Q 017221 152 KVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++++.|||+||.+|+.+|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999999865
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.10 E-value=0.081 Score=44.91 Aligned_cols=39 Identities=28% Similarity=0.441 Sum_probs=31.4
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCCc-----cceEEEEccCCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRPDR-----VKALVNLSVVFNP 188 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p~~-----v~~lil~~~~~~~ 188 (375)
.+++.|+|||+|+.+...+.....++ |+.+++++++...
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 44899999999999998887765443 8999999877654
No 221
>PLN02324 triacylglycerol lipase
Probab=95.06 E-value=0.042 Score=47.46 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 135 LVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+..++..+++.......+|.+.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4445555555443322369999999999999998864
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.05 E-value=0.039 Score=46.97 Aligned_cols=88 Identities=19% Similarity=0.239 Sum_probs=50.5
Q ss_pred CCEEEEEcCCCC-ChhhHHHHHHHHHhC--CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 80 GPLILFIHGFPL-LWYSWRHQITALASL--GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 80 ~~~il~~hG~~~-~~~~~~~~~~~L~~~--g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
+-.+|+.||.-+ +...|...+...... +..++.-...| ......+.-..--...++++.+.+....++ ++-.+
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~--~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~--kISfv 155 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMN--NMCQTFDGVDVLGERLAEEVKETLYDYSIE--KISFV 155 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeecccc--chhhccccceeeecccHHHHhhhhhccccc--eeeee
Confidence 458999999887 566777666666554 33333333332 221111111122233444555554444566 99999
Q ss_pred EeChHHHHHHHHHHh
Q 017221 157 GHDWGALIAWYLCLF 171 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~ 171 (375)
|||+||.++..+...
T Consensus 156 ghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 156 GHSLGGLVARYAIGY 170 (405)
T ss_pred eeecCCeeeeEEEEe
Confidence 999999887655443
No 223
>PLN02310 triacylglycerol lipase
Probab=95.05 E-value=0.087 Score=45.54 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHh
Q 017221 133 LHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++..+++..+++.... +..++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 4455666677765532 12379999999999999988854
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.04 E-value=0.28 Score=44.21 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=51.7
Q ss_pred ccccEEEEecCCCcCCCCCCchhhhhcCccccccC-------CceeEEEecCCCCCCCcc--ChhHHHHHHHHHHhh
Q 017221 307 IKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVP-------LLEEVIVMEGVGHFINEE--KPDEVNKHIYNFFQK 374 (375)
Q Consensus 307 ~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 374 (375)
-...+++.||..|.++|+....+++++ +.+... +..++..+||.+|+.--. .+-+....|.+|+++
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~--V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYER--VVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHH--HHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 356899999999999999999988865 444432 335889999999998443 556778899999875
No 225
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.91 E-value=0.031 Score=42.47 Aligned_cols=65 Identities=17% Similarity=0.226 Sum_probs=49.1
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCc-eeEEEecCCCCCCCccCh---hHHHHHHHHHHhhC
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLL-EEVIVMEGVGHFINEEKP---DEVNKHIYNFFQKF 375 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 375 (375)
+++++-|-|++|.++.+....... .+...+|.. +..++.+|+||+-.+.-+ +++...|.+|+.+|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~---~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAH---DLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHH---HHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 567888999999999987765432 244555554 466788999999866543 88999999999875
No 226
>PLN02802 triacylglycerol lipase
Probab=94.81 E-value=0.052 Score=48.01 Aligned_cols=39 Identities=26% Similarity=0.392 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
+..+++..+++....+..+|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344455555554432223789999999999999888653
No 227
>PLN02934 triacylglycerol lipase
Probab=94.37 E-value=0.074 Score=47.08 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHH
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~ 170 (375)
.....+.++++..... ++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~--kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA--KFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCC--eEEEeccccHHHHHHHHHH
Confidence 4455555555553333 8999999999999999874
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.25 E-value=0.086 Score=46.81 Aligned_cols=39 Identities=15% Similarity=0.268 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHhcC--CCCcEEEEEeChHHHHHHHHHHh
Q 017221 133 LHLVGDVIALLDAVAA--DQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~--~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++..+++..+++.... +..++.+.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3455677777766542 22379999999999999988854
No 229
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.12 E-value=0.091 Score=32.12 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=19.8
Q ss_pred eeEEEECCeEEEeeec---C-------CCCEEEEEcCCCCChhhH
Q 017221 62 HKVVNVNGINMHVAEK---G-------QGPLILFIHGFPLLWYSW 96 (375)
Q Consensus 62 ~~~~~~~g~~l~~~~~---g-------~~~~il~~hG~~~~~~~~ 96 (375)
...++.||+-|....- . ++|+|++.||+.+++..|
T Consensus 15 h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 15 HEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 4556778888764321 1 268999999999999887
No 230
>PLN02761 lipase class 3 family protein
Probab=94.03 E-value=0.1 Score=46.36 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcC----CCCcEEEEEeChHHHHHHHHHHh
Q 017221 134 HLVGDVIALLDAVAA----DQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~----~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++..++..+++.... ..-+|.+.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 445566666655421 22379999999999999988853
No 231
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.97 E-value=0.36 Score=38.58 Aligned_cols=82 Identities=22% Similarity=0.137 Sum_probs=47.7
Q ss_pred CcEEEEeCCCCC-CC-CCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCC------ccce
Q 017221 107 GYRAVAPDLRGY-GD-TDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPD------RVKA 178 (375)
Q Consensus 107 g~~v~~~d~~G~-G~-S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~ 178 (375)
|+.+..+++|.. +- +.........+..+=++.+.+.++......++++++|+|+|+.++...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 577778888761 10 000010023355555556666665533345689999999999999888776411 2334
Q ss_pred EEEEccCCCC
Q 017221 179 LVNLSVVFNP 188 (375)
Q Consensus 179 lil~~~~~~~ 188 (375)
+|+++-+..+
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 6666644433
No 232
>PLN02753 triacylglycerol lipase
Probab=93.77 E-value=0.12 Score=45.95 Aligned_cols=38 Identities=21% Similarity=0.331 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhcCC---CCcEEEEEeChHHHHHHHHHHh
Q 017221 134 HLVGDVIALLDAVAAD---QEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~---~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++...+..+++....+ .-+|.+.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4445555666554321 3489999999999999998854
No 233
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.69 E-value=0.36 Score=47.33 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
.+.|++.|+|..-|.......++..| ..|-+|.-....- +..++++.+.-...-++.+... .++.++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~-GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPE-GPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccC-CcchHHHHHHHHHHHHHhcCCC-CCeeeec
Confidence 34799999998877665555554443 2344443322221 3457888887777777776554 4899999
Q ss_pred eChHHHHHHHHHHhCC--CccceEEEEccCCC
Q 017221 158 HDWGALIAWYLCLFRP--DRVKALVNLSVVFN 187 (375)
Q Consensus 158 ~S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~ 187 (375)
+|+|+.++..+|.... +....+|++++...
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999997642 34667999987653
No 234
>PLN02719 triacylglycerol lipase
Probab=93.27 E-value=0.16 Score=45.11 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEEEeChHHHHHHHHHHh
Q 017221 134 HLVGDVIALLDAVAA---DQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~---~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
++..++..+++.... +..+|.+.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344455555554432 12379999999999999998854
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.07 E-value=0.27 Score=42.16 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 133 LHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
..+.+++..+++....- ++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~--~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY--SIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCc--EEEEecCChHHHHHHHHHHH
Confidence 56677777777776644 89999999999999988866
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.86 E-value=0.34 Score=43.71 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=54.6
Q ss_pred hCCcEEEEeCCCCCCCCCC--CCCCc--c--------ccHhHHHHHHHHHHHHh-cCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 105 SLGYRAVAPDLRGYGDTDA--PAEVP--S--------YTCLHLVGDVIALLDAV-AADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 105 ~~g~~v~~~d~~G~G~S~~--~~~~~--~--------~~~~~~~~d~~~~l~~l-~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
.+||.++.=| -||..+.. ..... . .++.+.+.--+++++.. +..++.-+..|.|-||.-++..|++
T Consensus 57 ~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQr 135 (474)
T PF07519_consen 57 ARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQR 135 (474)
T ss_pred hcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHh
Confidence 4589999988 45654432 11111 1 11222222333344333 3345688999999999999999999
Q ss_pred CCCccceEEEEccCCC
Q 017221 172 RPDRVKALVNLSVVFN 187 (375)
Q Consensus 172 ~p~~v~~lil~~~~~~ 187 (375)
||+.++|+|.-+|...
T Consensus 136 yP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 136 YPEDFDGILAGAPAIN 151 (474)
T ss_pred ChhhcCeEEeCCchHH
Confidence 9999999999998865
No 237
>PLN02847 triacylglycerol lipase
Probab=91.43 E-value=0.37 Score=43.72 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=18.1
Q ss_pred cEEEEEeChHHHHHHHHHHh
Q 017221 152 KVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+++++|||+||.+|..++..
T Consensus 252 kLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 79999999999999888765
No 238
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=90.55 E-value=1.1 Score=34.45 Aligned_cols=106 Identities=12% Similarity=-0.049 Sum_probs=61.1
Q ss_pred EEEECCeEEEeeecCC----CCEEE--EEcCCCCChhhHHHHHHHHHhCCcEE------EEeCCCCCCCCCCCCCCcccc
Q 017221 64 VVNVNGINMHVAEKGQ----GPLIL--FIHGFPLLWYSWRHQITALASLGYRA------VAPDLRGYGDTDAPAEVPSYT 131 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~----~~~il--~~hG~~~~~~~~~~~~~~L~~~g~~v------~~~d~~G~G~S~~~~~~~~~~ 131 (375)
.+..+|..+.|..+.. |++.| +.-|+....+.-.+++..|.++|+.+ +.++.. ..
T Consensus 39 e~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-------------d~ 105 (184)
T TIGR01626 39 EIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-------------DA 105 (184)
T ss_pred eEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-------------cc
Confidence 4556778888888764 55444 44577777888889999999888888 777522 12
Q ss_pred HhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCcc-ceEEEEccCC
Q 017221 132 CLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRV-KALVNLSVVF 186 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v-~~lil~~~~~ 186 (375)
.......+..+++..+... ++..+...-.|.++..+... .+ ...++++.-.
T Consensus 106 ~~~~~~fVk~fie~~~~~~-P~~~vllD~~g~v~~~~gv~---~~P~T~fVIDk~G 157 (184)
T TIGR01626 106 IVGTGMFVKSSAKKGKKEN-PWSQVVLDDKGAVKNAWQLN---SEDSAIIVLDKTG 157 (184)
T ss_pred hhhHHHHHHHHHHHhcccC-CcceEEECCcchHHHhcCCC---CCCceEEEECCCC
Confidence 2233445666666665541 22233333355454443322 12 2335666543
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.23 E-value=0.61 Score=42.08 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=38.8
Q ss_pred ccHhHHHHHHHHHHHHhcCC-CCcEEEEEeChHHHHHHHHHHh-----CCC------ccceEEEEccCC
Q 017221 130 YTCLHLVGDVIALLDAVAAD-QEKVFVVGHDWGALIAWYLCLF-----RPD------RVKALVNLSVVF 186 (375)
Q Consensus 130 ~~~~~~~~d~~~~l~~l~~~-~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~lil~~~~~ 186 (375)
.++..-...+.+.+...++. .++++.+||||||.++=.+... .|+ ..+|+|.++.+-
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 35555556666666666665 5689999999999888665543 232 367788777653
No 240
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.05 E-value=0.98 Score=37.47 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=72.4
Q ss_pred CCEEEEEcCCCCChhh----HHHHHH-----------HHHhCCcEEEEeCCC-CCCCCCCCCC-CccccHhHHHHHHHHH
Q 017221 80 GPLILFIHGFPLLWYS----WRHQIT-----------ALASLGYRAVAPDLR-GYGDTDAPAE-VPSYTCLHLVGDVIAL 142 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~----~~~~~~-----------~L~~~g~~v~~~d~~-G~G~S~~~~~-~~~~~~~~~~~d~~~~ 142 (375)
.|..+.+.|.++.+.. |+.+-+ .|.+ ..++.+|.| |.|.|.-... ....+..+.+.|+.++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 6889999998765442 222211 2222 567777776 7787754332 1234678899999999
Q ss_pred HHHhcCC-----CCcEEEEEeChHHHHHHHHHHhCC---------CccceEEEEccCCCCC
Q 017221 143 LDAVAAD-----QEKVFVVGHDWGALIAWYLCLFRP---------DRVKALVNLSVVFNPR 189 (375)
Q Consensus 143 l~~l~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p---------~~v~~lil~~~~~~~~ 189 (375)
++.+-.. ..+++++..|+||-+|..++...- -.+.+++|-++-..+.
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 9887432 348999999999999988886532 2467777777766554
No 241
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=88.90 E-value=9.4 Score=33.40 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=69.2
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCC---------------------ccccHhHHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEV---------------------PSYTCLHLVGDV 139 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~---------------------~~~~~~~~~~d~ 139 (375)
|+|+++--+-.-.+.+.++.+.+.+.|..|+.+|.-=.|.+....+. .....+.+.+-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 45666665666667888888999999999999997544444332210 112233344445
Q ss_pred HHHHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEc
Q 017221 140 IALLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLS 183 (375)
Q Consensus 140 ~~~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~ 183 (375)
..++..+..+ -+-++-+|-|.|..++.......|=-+-+++..-
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 5555555332 1267889999999999999999998888887554
No 242
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.61 E-value=1.5 Score=35.70 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=24.4
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 151 EKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
.++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred ceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 48999999999999999988874 444444443
No 243
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.61 E-value=1.5 Score=35.70 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=24.4
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 151 EKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
.++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred ceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 48999999999999999988874 444444443
No 244
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=87.47 E-value=1.1 Score=40.52 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=56.5
Q ss_pred EEEEEcCCCC---ChhhHHHHHHHHHh-CCcEEEEeCCCCCCCCCCCCCCccccHhHHHH---HHHHHHHHhcCCCCcEE
Q 017221 82 LILFIHGFPL---LWYSWRHQITALAS-LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVG---DVIALLDAVAADQEKVF 154 (375)
Q Consensus 82 ~il~~hG~~~---~~~~~~~~~~~L~~-~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~---d~~~~l~~l~~~~~~~~ 154 (375)
.|+=+||+|. ++.......+.++. -|.-|+.+|+-=.-+.. .....++..- ++..--+.+|...++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP-----FPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP-----FPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC-----CCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 6777899873 33333334444433 27899999974222221 1222222221 22222345666677999
Q ss_pred EEEeChHHHHHHHHHHhC----CCccceEEEEccCC
Q 017221 155 VVGHDWGALIAWYLCLFR----PDRVKALVNLSVVF 186 (375)
Q Consensus 155 l~G~S~Gg~~a~~~a~~~----p~~v~~lil~~~~~ 186 (375)
++|-|.||.+.+..+.+. =..-+|+++.-++.
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 999999998766665542 11236777766554
No 245
>PF03283 PAE: Pectinacetylesterase
Probab=86.86 E-value=3 Score=36.21 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=27.7
Q ss_pred CCcEEEEEeChHHHHHHHHHHh----CCCccceEEEEccCCCCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLF----RPDRVKALVNLSVVFNPRN 190 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~lil~~~~~~~~~ 190 (375)
.++++|.|.|.||.-++..+.. .|..++-..+.++......
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 4589999999999988776644 5654555555555555433
No 246
>PRK02399 hypothetical protein; Provisional
Probab=86.56 E-value=22 Score=31.25 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=65.4
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC---------------------CccccHhHHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE---------------------VPSYTCLHLVGDV 139 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~---------------------~~~~~~~~~~~d~ 139 (375)
+.|+++--+-.-.+.+.++.+.+.++|..|+.+|.-..|....+.+ ......+.+.+-+
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4555554454555677778888888899999999844442211110 0111223344444
Q ss_pred HHHHHHhcCC--CCcEEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 140 IALLDAVAAD--QEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 140 ~~~l~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
..+++.+..+ -.-++-+|-|.|..++.......|--+-+++..--
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTm 130 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVSTM 130 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEcc
Confidence 5555543221 12688899999999999999999988888875543
No 247
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=84.88 E-value=10 Score=25.88 Aligned_cols=84 Identities=19% Similarity=0.117 Sum_probs=53.1
Q ss_pred hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHH--HHHHHHHHhC
Q 017221 95 SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGA--LIAWYLCLFR 172 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg--~~a~~~a~~~ 172 (375)
.|..+.+.+..+|+-.=.+.++.+|.+...-- .....+.-...+..+++..-.. +++++|-|--. -+-..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~~--kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPER--KFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCCC--cEEEEeeCCCcCHHHHHHHHHHC
Confidence 44555666666677766677777755532210 0111134455666777766556 99999988544 4556678889
Q ss_pred CCccceEEE
Q 017221 173 PDRVKALVN 181 (375)
Q Consensus 173 p~~v~~lil 181 (375)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998864
No 248
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.82 E-value=9.4 Score=31.85 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=48.6
Q ss_pred CEEEEEcCCCCChh------hHHHHHHHH-HhCCcEEEEeCCCCCCCC--------CCCC-----CCccccHhHHHHHHH
Q 017221 81 PLILFIHGFPLLWY------SWRHQITAL-ASLGYRAVAPDLRGYGDT--------DAPA-----EVPSYTCLHLVGDVI 140 (375)
Q Consensus 81 ~~il~~hG~~~~~~------~~~~~~~~L-~~~g~~v~~~d~~G~G~S--------~~~~-----~~~~~~~~~~~~d~~ 140 (375)
..|||+-|.+.+.. .-..+.+.+ ...+-..+++=.+|-|.. .... ......+++.+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 46788888764332 123444555 222324444456777761 1100 001123344444333
Q ss_pred HHH-HHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 141 ALL-DAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 141 ~~l-~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
..+ +.. ...++|.++|+|-|+..|-.++..-
T Consensus 82 ~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 333 333 2245899999999999999888653
No 249
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=78.69 E-value=10 Score=31.12 Aligned_cols=72 Identities=22% Similarity=0.249 Sum_probs=46.3
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCC--------CCCCCCC-----CCCccccHhHHHHHHHHHHHHh
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRG--------YGDTDAP-----AEVPSYTCLHLVGDVIALLDAV 146 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G--------~G~S~~~-----~~~~~~~~~~~~~d~~~~l~~l 146 (375)
-|.|+|..|.++ ..+.|+..||.|+..|+-= .|..-.. +..-.-+.+.+.+-+.+.++..
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 488999998764 4678888999999999731 1211100 0001236677888888888888
Q ss_pred cCCCCcEEEEEeC
Q 017221 147 AADQEKVFVVGHD 159 (375)
Q Consensus 147 ~~~~~~~~l~G~S 159 (375)
|.+ +-|.=+||.
T Consensus 325 G~~-ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKS-RYIANLGHG 336 (359)
T ss_pred Ccc-ceEEecCCC
Confidence 865 223336774
No 250
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.66 E-value=6.8 Score=35.10 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=31.2
Q ss_pred CCcEEEEEeChHHHHHHHHHHhC-----CCccceEEEEccCCCCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFR-----PDRVKALVNLSVVFNPR 189 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~ 189 (375)
.+++.|+|+|+|+-+...+.... -..|..++++++|....
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 34999999999999998777642 23588999999877653
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=76.92 E-value=15 Score=28.93 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=50.0
Q ss_pred HHHHHHhCCc-EEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh----HHHHHHHHHHhCC
Q 017221 99 QITALASLGY-RAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW----GALIAWYLCLFRP 173 (375)
Q Consensus 99 ~~~~L~~~g~-~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~----Gg~~a~~~a~~~p 173 (375)
..+.+...|. +|+..|.++. ..++.+.+++.+.++++..+ . .++++|+|. |..++.++|.+..
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p--~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-V--DLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-C--CEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 3444555565 6777775532 34577888888989888866 3 699999998 8899999998852
Q ss_pred -CccceEEEE
Q 017221 174 -DRVKALVNL 182 (375)
Q Consensus 174 -~~v~~lil~ 182 (375)
..+..++-+
T Consensus 136 a~lvsdv~~l 145 (202)
T cd01714 136 WPQITYVSKI 145 (202)
T ss_pred CCccceEEEE
Confidence 234455444
No 252
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=76.79 E-value=12 Score=29.35 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCCChhh--H-HHHHHHHHhCCcEEEEeCCC
Q 017221 78 GQGPLILFIHGFPLLWYS--W-RHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~--~-~~~~~~L~~~g~~v~~~d~~ 116 (375)
|.++.|.|++-.+...+. | +...+.|.+.|..+.-+++-
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 346799999988776654 3 44566788889998887753
No 253
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=76.31 E-value=32 Score=29.07 Aligned_cols=92 Identities=15% Similarity=0.065 Sum_probs=52.6
Q ss_pred CCEEEEEcCCC----CCh-hhHHHHHHHHHh-CCcEEEEeCCCCCCCCCCCCC--------------CccccHhHHHHHH
Q 017221 80 GPLILFIHGFP----LLW-YSWRHQITALAS-LGYRAVAPDLRGYGDTDAPAE--------------VPSYTCLHLVGDV 139 (375)
Q Consensus 80 ~~~il~~hG~~----~~~-~~~~~~~~~L~~-~g~~v~~~d~~G~G~S~~~~~--------------~~~~~~~~~~~d~ 139 (375)
+..|+++-|.. ... ...-.+...|.. .+.+++++-.+|.|.-.-... .....+.+-+...
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 34666666642 221 233445566665 578888888888875421110 0112233333333
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
..++..--...++|+++|+|-|+..|-.+|..
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 33333322234599999999999999888765
No 254
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=75.78 E-value=19 Score=25.74 Aligned_cols=29 Identities=28% Similarity=0.368 Sum_probs=20.9
Q ss_pred CCCEEEEEcCCCCChhhH--HHHHHHHHhCC
Q 017221 79 QGPLILFIHGFPLLWYSW--RHQITALASLG 107 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~--~~~~~~L~~~g 107 (375)
++|.|+-+||+.|..-.| +-+++.|-..|
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 478999999999988766 34556655444
No 255
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=74.59 E-value=5.4 Score=35.52 Aligned_cols=106 Identities=18% Similarity=0.130 Sum_probs=60.2
Q ss_pred CEEEEEcCCCC---Chh--hHHHHHHHHHhC-CcEEEEeCCC----C---C-CCCCCCCCCccccHhHHHHHHHHHHHHh
Q 017221 81 PLILFIHGFPL---LWY--SWRHQITALASL-GYRAVAPDLR----G---Y-GDTDAPAEVPSYTCLHLVGDVIALLDAV 146 (375)
Q Consensus 81 ~~il~~hG~~~---~~~--~~~~~~~~L~~~-g~~v~~~d~~----G---~-G~S~~~~~~~~~~~~~~~~d~~~~l~~l 146 (375)
.++|++-|+|. ++. .|+ .+.|+.. ..-|+.+++| | . |.++.+.+..-.+-.-....+++-+...
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aF 213 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAF 213 (601)
T ss_pred eEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHh
Confidence 47888888763 221 222 3345443 2445555554 1 2 4444444333334444455777778888
Q ss_pred cCCCCcEEEEEeChHHHH-HHHHHHhC-CCccceEEEEccCCCC
Q 017221 147 AADQEKVFVVGHDWGALI-AWYLCLFR-PDRVKALVNLSVVFNP 188 (375)
Q Consensus 147 ~~~~~~~~l~G~S~Gg~~-a~~~a~~~-p~~v~~lil~~~~~~~ 188 (375)
|.++.++.|+|.|.|+.- .+++.+=- -..++..|+-++....
T Consensus 214 GGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 214 GGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred CCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCC
Confidence 888889999999999843 33322211 1247777777766653
No 256
>PRK12467 peptide synthase; Provisional
Probab=74.09 E-value=15 Score=43.24 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=66.8
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
+.++..|...++...+..+...|... ..++.+..++.-.-.. ...+++.++....+.+...... .+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~-~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAK-GPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccC-CCeeeeeeec
Confidence 56999999988887787777777554 7888887765432221 2345666777777766655432 3789999999
Q ss_pred HHHHHHHHHHh---CCCccceEEEEc
Q 017221 161 GALIAWYLCLF---RPDRVKALVNLS 183 (375)
Q Consensus 161 Gg~~a~~~a~~---~p~~v~~lil~~ 183 (375)
||.++..++.. ..+.+..+.+++
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999888765 334566555554
No 257
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=73.65 E-value=8 Score=33.78 Aligned_cols=58 Identities=16% Similarity=0.074 Sum_probs=38.3
Q ss_pred cccccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCcc-----ChhHHHHHHHHHH
Q 017221 306 QIKVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEE-----KPDEVNKHIYNFF 372 (375)
Q Consensus 306 ~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl 372 (375)
+-.-.+++|+|++|+..-.... +.+...++ .+.+.||++|...+. +.++....|.+|-
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~f~--------l~~g~~ds-~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEPFR--------LGKGKRDS-YVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred hCCCeEEEEeCCCCCcccCccc--------cCCCCcce-EEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3456799999999998643321 22334455 778889999987543 3355666666664
No 258
>COG3056 Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=72.90 E-value=28 Score=26.50 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=37.8
Q ss_pred CCEEEEEcCCCCChhhHHHH-HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC-CCcEEEEE
Q 017221 80 GPLILFIHGFPLLWYSWRHQ-ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD-QEKVFVVG 157 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~-~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~l~G 157 (375)
..-|+-+|.-..-...++.. .+.+..+||++ |+. .... -....+++..|+.+-.-...++ +-.+.+..
T Consensus 77 ~~~lv~L~as~~vr~llq~vl~~q~~srGfri------g~n--~~~n--~~i~V~qlya~V~qgnlryni~tkv~i~I~A 146 (204)
T COG3056 77 DNQLVKLTASRDVRFLLQEVLEKQMTSRGFRV------GPN--GEVN--LQITVDQLYADVEQGNLRYNIDTKVDITITA 146 (204)
T ss_pred CCCEEEecCCccHHHHHHHHHHHHhhhcceEe------ccC--CCce--EEEEhHHhhhhhhhcceeecccceEEEEEEE
Confidence 45677788777665555553 45677889986 111 1111 2345556666665543333333 11344455
Q ss_pred eChHH
Q 017221 158 HDWGA 162 (375)
Q Consensus 158 ~S~Gg 162 (375)
.+--|
T Consensus 147 ~~~~G 151 (204)
T COG3056 147 TAANG 151 (204)
T ss_pred EcCCC
Confidence 54444
No 259
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=72.25 E-value=9 Score=34.36 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=41.8
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCccChhHHHHHHHHHHh
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQ 373 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 373 (375)
+.+++...|-.|..+++-....-.+.-......++...+.+++ +|||+.+++|+...+.+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 4566777777777777655543222222223333442455665 6999999999999999988875
No 260
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=70.22 E-value=68 Score=28.54 Aligned_cols=78 Identities=12% Similarity=0.068 Sum_probs=43.4
Q ss_pred CCEEEEEcCCCCC---hhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 80 GPLILFIHGFPLL---WYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 80 ~~~il~~hG~~~~---~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
+.++|+++.+... .-....-+..|.+.|+.|+-++ +|+=.........-.+.++++..+...+.......+++.+.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlIT 194 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLIT 194 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEEe
Confidence 3566667654321 1123556678888899987554 44311111111134567777777777775433344477777
Q ss_pred Ee
Q 017221 157 GH 158 (375)
Q Consensus 157 G~ 158 (375)
|-
T Consensus 195 gG 196 (399)
T PRK05579 195 AG 196 (399)
T ss_pred CC
Confidence 77
No 261
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=69.22 E-value=16 Score=27.99 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=39.6
Q ss_pred cCCCCEEEEEcCCCCChhhH--HHHHHHHHhCCcEEEEeCCCC--CCCCCCCCCCccccHhHHHHHHHHH
Q 017221 77 KGQGPLILFIHGFPLLWYSW--RHQITALASLGYRAVAPDLRG--YGDTDAPAEVPSYTCLHLVGDVIAL 142 (375)
Q Consensus 77 ~g~~~~il~~hG~~~~~~~~--~~~~~~L~~~g~~v~~~d~~G--~G~S~~~~~~~~~~~~~~~~d~~~~ 142 (375)
.+.++.+|++-|..|+.-+- ..+.+.|.++|++++..|==. ||.+.. -.++-++-.+.+..+
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniRRv 84 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIRRV 84 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHHHH
Confidence 34578999999998765532 446677888999999998321 344422 234555555555443
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=67.67 E-value=8.7 Score=32.57 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 138 DVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 138 d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
-+.+.+++.++. .-.++|.|+|+.++..++..+
T Consensus 32 GvL~aLee~gi~--~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIP--VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC
Confidence 445555565776 668899999999999999875
No 263
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=66.64 E-value=11 Score=28.81 Aligned_cols=33 Identities=24% Similarity=0.172 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.+.++..++. .-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~--~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPL--IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCCC
Confidence 34444455666 6689999999999999998754
No 264
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=66.09 E-value=4.1 Score=30.50 Aligned_cols=49 Identities=18% Similarity=0.277 Sum_probs=28.8
Q ss_pred CCCCCCCCCC-CCCccccHhHHHHHH----HHHHHHhcCC--CCcEEEEEeChHHH
Q 017221 115 LRGYGDTDAP-AEVPSYTCLHLVGDV----IALLDAVAAD--QEKVFVVGHDWGAL 163 (375)
Q Consensus 115 ~~G~G~S~~~-~~~~~~~~~~~~~d~----~~~l~~l~~~--~~~~~l~G~S~Gg~ 163 (375)
+-|||..... .....++.++++.-+ ..+.+..+.. +++|.|+|.|+++.
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4578766221 122467888888888 4444444332 56999999999887
No 265
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=65.76 E-value=21 Score=27.45 Aligned_cols=53 Identities=23% Similarity=0.367 Sum_probs=34.5
Q ss_pred EEEECCeEEEeeecCCCCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCC
Q 017221 64 VVNVNGINMHVAEKGQGPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYG 119 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G 119 (375)
+...+|..+.....+ .|+|...+........+.+..+.++ |+.|+.+..-|.+
T Consensus 58 f~l~dG~~v~lsd~~---lV~FwaswCp~C~~e~P~L~~l~~~~g~~Vi~Vs~D~~~ 111 (181)
T PRK13728 58 FRLSNGRQVNLADWK---VVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQG 111 (181)
T ss_pred cCCCCCCEeehhHce---EEEEECCCCHhHHHHHHHHHHHHHHcCCEEEEEEeCCCC
Confidence 333467666554443 7777777766666666667777655 8999998865443
No 266
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=65.60 E-value=5.3 Score=34.14 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 138 DVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 138 d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
-+.++++..|+. +-.++|||+|=+.|+.++..
T Consensus 73 al~~~l~~~Gi~--P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGIK--PDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTHC--ESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhcccccc--cceeeccchhhHHHHHHCCc
Confidence 344566777777 88999999999888766643
No 267
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=65.52 E-value=8.2 Score=32.54 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=23.8
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+.++++..|++ +-.++|||+|-+.|+.++..
T Consensus 72 ~~~~l~~~Gi~--p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVR--PDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCc--ccEEEecCHHHHHHHHHhCC
Confidence 33455677887 78999999999998877643
No 268
>PRK10279 hypothetical protein; Provisional
Probab=65.23 E-value=9.5 Score=32.20 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.+.+++.++. .-.+.|.|+|+.++..||....
T Consensus 23 VL~aL~E~gi~--~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIE--IDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCC--cCEEEEEcHHHHHHHHHHcCCh
Confidence 44555556776 6789999999999999997654
No 269
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=64.58 E-value=13 Score=29.85 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=23.2
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.++..+++ .-.+.|.|.|+.++..++...+
T Consensus 20 ~aL~e~gi~--~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEMGLE--PSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHcCCC--ceEEEEeCHHHHHHHHHHcCCC
Confidence 334444665 5579999999999999997653
No 270
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=64.22 E-value=12 Score=29.19 Aligned_cols=32 Identities=28% Similarity=0.213 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
+.+.++..++. .-.+.|.|.||.+|..++...
T Consensus 17 vl~~L~e~~~~--~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGIL--KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCC--cceEEEECHHHHHHHHHHcCC
Confidence 33344444555 568899999999999999764
No 271
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=63.81 E-value=9.5 Score=32.15 Aligned_cols=31 Identities=19% Similarity=0.034 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+.++++..++. +..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~--P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPR--PSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCC--CcEEeecCHHHHHHHHHhCC
Confidence 34455666776 88999999999888877643
No 272
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=63.69 E-value=12 Score=31.04 Aligned_cols=33 Identities=9% Similarity=0.113 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 138 DVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 138 d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
-+.+.+++.++. .=.+.|.|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~--~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIP--IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCC--ccEEEEECHHHHHHHHHHcCC
Confidence 344555666776 557899999999999999874
No 273
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=62.97 E-value=24 Score=26.61 Aligned_cols=53 Identities=9% Similarity=0.053 Sum_probs=30.8
Q ss_pred HhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 132 CLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 132 ~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
.++..+++.++++.+..+.+++.++|-|..|..-+.++...++.|..++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 33445556666666665566899999999999988888776777887775554
No 274
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=61.42 E-value=9 Score=29.81 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=25.4
Q ss_pred CEEEEEcCC---CCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 81 PLILFIHGF---PLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 81 ~~il~~hG~---~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
..||++|.. ..+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 368999942 2345566788899999999998874
No 275
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=60.94 E-value=13 Score=30.80 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=28.6
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
..||++|....+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999877777778889999999999998875
No 276
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=60.31 E-value=17 Score=34.51 Aligned_cols=77 Identities=21% Similarity=0.165 Sum_probs=43.0
Q ss_pred CCEEEEEcCCC----------CChhhHHHHHHHHHhCCcEEEEeCCCC---CCCCCCCCCCccccHh----HHHHHHHHH
Q 017221 80 GPLILFIHGFP----------LLWYSWRHQITALASLGYRAVAPDLRG---YGDTDAPAEVPSYTCL----HLVGDVIAL 142 (375)
Q Consensus 80 ~~~il~~hG~~----------~~~~~~~~~~~~L~~~g~~v~~~d~~G---~G~S~~~~~~~~~~~~----~~~~d~~~~ 142 (375)
+-+||+.|... -+.+.+...++.|.++||+++.+|--- .|...-+...-..|++ +....+.-+
T Consensus 48 ~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~PI 127 (671)
T PRK14582 48 GFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFPI 127 (671)
T ss_pred ceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHHH
Confidence 34566666543 234578888999999999999988321 1221111111122332 233456677
Q ss_pred HHHhcCCCCcEEEEE
Q 017221 143 LDAVAADQEKVFVVG 157 (375)
Q Consensus 143 l~~l~~~~~~~~l~G 157 (375)
++..+.. .-+.++|
T Consensus 128 Lkkygvp-ATfFlvg 141 (671)
T PRK14582 128 LQAFQWP-AVWAPVG 141 (671)
T ss_pred HHHcCCC-EEEEEec
Confidence 7777775 2344554
No 277
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=59.07 E-value=57 Score=26.44 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=26.7
Q ss_pred CCCEEEEEcCCCC--ChhhH-HHHHHHHHhCCcEEEEeCCC
Q 017221 79 QGPLILFIHGFPL--LWYSW-RHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 79 ~~~~il~~hG~~~--~~~~~-~~~~~~L~~~g~~v~~~d~~ 116 (375)
.+|.|+|++-.+. ....| +.+.+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4688999998763 33443 33556677789998888765
No 278
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=58.96 E-value=14 Score=31.30 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.+.++..++. .-.+.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~--~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIP--IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCC--ccEEEecCHHHHHHHHHHcCCC
Confidence 34445555565 6789999999999999998753
No 279
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.78 E-value=12 Score=31.35 Aligned_cols=31 Identities=19% Similarity=0.117 Sum_probs=23.1
Q ss_pred HHHHHHhc-CCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 140 IALLDAVA-ADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 140 ~~~l~~l~-~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
.++++..+ +. +-.++|||+|=+.|+.++...
T Consensus 73 ~~~l~~~g~i~--p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 73 YLKLKEQGGLK--PDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHcCCCC--CCEEeecCHHHHHHHHHhCCC
Confidence 34445556 77 789999999999888777543
No 280
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=58.60 E-value=60 Score=28.28 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=57.9
Q ss_pred CCEEEEEcCCC-------CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCc
Q 017221 80 GPLILFIHGFP-------LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEK 152 (375)
Q Consensus 80 ~~~il~~hG~~-------~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 152 (375)
...||++||-. .+.+.|..+++.+.++| -+-.+|....|..++ +++-+.-+..+++. . +
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~---~--~ 236 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEV---G--P 236 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHh---C--C
Confidence 35799999854 34678999999999985 456678776665432 33334344444333 3 3
Q ss_pred EEEEEeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 153 VFVVGHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
-.++..|+.=.+++ |.+||-++++++.
T Consensus 237 ~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 237 ELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred cEEEEehhhhhhhh-----hhhccceeEEEeC
Confidence 37888888776665 6789999988864
No 281
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=58.46 E-value=15 Score=29.50 Aligned_cols=34 Identities=24% Similarity=0.210 Sum_probs=27.4
Q ss_pred CEEEEEcCC-CCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 81 PLILFIHGF-PLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 81 ~~il~~hG~-~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
..||++|.. ..+.+....+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 478889974 4456677889999999999998875
No 282
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=58.42 E-value=61 Score=22.67 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=49.4
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 82 LILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
.||..|| .-.......++.+... --.+.++++. ...+.+++.+.+.+.++.+... +.+.++--=.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~-~~vlil~Dl~ 67 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEG-DGVLILTDLG 67 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTT-SEEEEEESST
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCC-CcEEEEeeCC
Confidence 4788899 3445566667776655 2466666655 3457888999999999777533 3677776666
Q ss_pred HHHHHHHHHHh
Q 017221 161 GALIAWYLCLF 171 (375)
Q Consensus 161 Gg~~a~~~a~~ 171 (375)
||.....++..
T Consensus 68 ggsp~n~a~~~ 78 (116)
T PF03610_consen 68 GGSPFNEAARL 78 (116)
T ss_dssp TSHHHHHHHHH
T ss_pred CCccchHHHHH
Confidence 66555444433
No 283
>COG3065 Slp Starvation-inducible outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=57.48 E-value=46 Score=25.31 Aligned_cols=27 Identities=15% Similarity=0.097 Sum_probs=17.5
Q ss_pred ccCCChHHHHHHHHHHHHHhhcccCCC
Q 017221 3 SCNFPGTFSACLLVFLLAFSVNKQIPQ 29 (375)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (375)
.++|+|++.+++..+++++++|...+.
T Consensus 2 ~~~m~~~~~~l~~~laflLsgC~tiPk 28 (191)
T COG3065 2 ASQMNMKKGALIGTLAFLLSGCVTIPK 28 (191)
T ss_pred chHhhhHHHHHHHHHHHHHhhcccCCh
Confidence 456667777777766666666665554
No 284
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=57.17 E-value=18 Score=27.67 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=23.1
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.++..++. .-.+.|.|.|+.++..++...+
T Consensus 20 ~~L~e~g~~--~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIE--IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCC--eeEEEEeCHHHHHHHHHHcCCC
Confidence 333444554 5678999999999999998764
No 285
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=55.40 E-value=84 Score=23.67 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=27.8
Q ss_pred EEEECCeEEEeeecCCCCEEEEEcCCCC-Chh----hHHHHHHHHHhCCcEEEEeCC
Q 017221 64 VVNVNGINMHVAEKGQGPLILFIHGFPL-LWY----SWRHQITALASLGYRAVAPDL 115 (375)
Q Consensus 64 ~~~~~g~~l~~~~~g~~~~il~~hG~~~-~~~----~~~~~~~~L~~~g~~v~~~d~ 115 (375)
....+|..+.......++++|.+....+ ... .+..+.+.+.+.+..++.++.
T Consensus 46 ~~~~~g~~~~l~~~~~k~~~l~f~a~~C~~C~~~~~~l~~~~~~~~~~~~~vi~i~~ 102 (173)
T PRK03147 46 LTDLEGKKIELKDLKGKGVFLNFWGTWCKPCEKEMPYMNELYPKYKEKGVEIIAVNV 102 (173)
T ss_pred eecCCCCEEeHHHcCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEEc
Confidence 4456777666555444566555543222 222 223344455555688888864
No 286
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=54.77 E-value=20 Score=28.51 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.+.+.+.+.. .-.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~--~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIE--PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCCc
Confidence 33444445655 5588999999999999999875
No 287
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=54.38 E-value=40 Score=28.08 Aligned_cols=82 Identities=12% Similarity=0.067 Sum_probs=45.7
Q ss_pred EEEEcCCCCC-hhhHHHHHHHHHhCCc-------EEEEeCCCCCCCCCCCCCCccccHhHHH--------HHHHHHHHHh
Q 017221 83 ILFIHGFPLL-WYSWRHQITALASLGY-------RAVAPDLRGYGDTDAPAEVPSYTCLHLV--------GDVIALLDAV 146 (375)
Q Consensus 83 il~~hG~~~~-~~~~~~~~~~L~~~g~-------~v~~~d~~G~G~S~~~~~~~~~~~~~~~--------~d~~~~l~~l 146 (375)
-+++.|.|.. ...-+.+...+.++|. +++.+|..|.=..++... ...-..++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l--~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDL--TPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcc--hHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 3445566543 3344455556666676 899999998533332210 01111122 3566666666
Q ss_pred cCCCCcEEEEEeCh-HHHHHHHHHH
Q 017221 147 AADQEKVFVVGHDW-GALIAWYLCL 170 (375)
Q Consensus 147 ~~~~~~~~l~G~S~-Gg~~a~~~a~ 170 (375)
+.+ +++|.|- ||.+.-.+..
T Consensus 105 ~pt----vlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 105 KPT----VLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred CCC----EEEEeCCCCCCCCHHHHH
Confidence 555 9999995 6755544443
No 288
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=53.00 E-value=27 Score=26.60 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=22.1
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
+.++..+.. .-.+.|.|.|+.+|..++...
T Consensus 20 ~~L~~~~~~--~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIP--IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCC--eeEEEEECHHHHHHHHHHcCC
Confidence 333444554 557899999999999999754
No 289
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.98 E-value=28 Score=28.21 Aligned_cols=35 Identities=23% Similarity=0.117 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC
Q 017221 139 VIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
+.+.+...++..+.-.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 33444444554224479999999999999998764
No 290
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=51.37 E-value=15 Score=32.79 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=25.6
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccce
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKA 178 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 178 (375)
+.+...++. +-++.|.|.|+.+|..++...++++..
T Consensus 93 kaL~E~gl~--p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 93 KALFEANLL--PRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHcCCC--CCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 333333555 448999999999999999976665433
No 291
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=51.35 E-value=57 Score=26.24 Aligned_cols=49 Identities=18% Similarity=0.254 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 95 SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
.++.+++.|.++|+.|..+.+.- ......+.+.+.+.++..+.+ .+.++
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~-----------~~~~~s~~~~L~~~~~~~~~~--~~~~~ 98 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDD-----------PENTQSFEDALARALKQHGID--RLHVM 98 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH------EEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCC-----------ccccccHHHHHHHHHHHcCCC--EEEEE
Confidence 56788999999999999998661 122335667777888888777 66555
No 292
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=51.23 E-value=20 Score=28.66 Aligned_cols=32 Identities=22% Similarity=0.129 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.+.=+|++|-|-+.+ +..|+++||+|+.+|+-
T Consensus 37 ~~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 37 PGGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp TSEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 345678899887654 56788899999999954
No 293
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.77 E-value=29 Score=28.76 Aligned_cols=53 Identities=21% Similarity=0.163 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCC-CCcEEEEEeChHHHHHHHHHHh---CCCccceEEEEccCCCC
Q 017221 136 VGDVIALLDAVAAD-QEKVFVVGHDWGALIAWYLCLF---RPDRVKALVNLSVVFNP 188 (375)
Q Consensus 136 ~~d~~~~l~~l~~~-~~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~lil~~~~~~~ 188 (375)
.+.+.+.++.+-.+ ..|++|.|.|+|++-+...-.. .-++++|.+..+|+...
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 33333334444222 3479999999998776554332 23569999999987653
No 294
>COG3933 Transcriptional antiterminator [Transcription]
Probab=50.70 E-value=1.2e+02 Score=27.20 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
-.+||+.||....+ +....+..|... --+.++|+| -..+..+..+.+.+.+++.... +=.++=..
T Consensus 109 v~vIiiAHG~sTAS-SmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~--~GlllLVD 173 (470)
T COG3933 109 VKVIIIAHGYSTAS-SMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYR--SGLLLLVD 173 (470)
T ss_pred eeEEEEecCcchHH-HHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCcc--CceEEEEe
Confidence 35899999987644 345667777666 468899999 4567788888888888887665 43556678
Q ss_pred hHHHHHHHHH
Q 017221 160 WGALIAWYLC 169 (375)
Q Consensus 160 ~Gg~~a~~~a 169 (375)
||...+..=.
T Consensus 174 MGSL~~f~~~ 183 (470)
T COG3933 174 MGSLTSFGSI 183 (470)
T ss_pred cchHHHHHHH
Confidence 8887665433
No 295
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=50.67 E-value=80 Score=23.43 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=43.6
Q ss_pred CCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCC-----------CCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 88 GFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAP-----------AEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 88 G~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~-----------~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
+.||.......+++.|.++|++|..+-...-+..... ..............+..+++....+ ++.
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D----iVh 85 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPD----IVH 85 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-S----EEE
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCC----eEE
Confidence 3445555667889999999999988854433322222 0001111222334444555554444 335
Q ss_pred EeChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 157 GHDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 157 G~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
.|+.........+.. .+.-+...-.
T Consensus 86 ~~~~~~~~~~~~~~~---~~~~v~~~H~ 110 (177)
T PF13439_consen 86 IHGPPAFWIALLACR---KVPIVYTIHG 110 (177)
T ss_dssp CCTTHCCCHHHHHHH---CSCEEEEE-H
T ss_pred ecccchhHHHHHhcc---CCCEEEEeCC
Confidence 666665544444443 3555555543
No 296
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=50.30 E-value=20 Score=28.81 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=22.5
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.=||++|-|-+.+ +..|+++||+|+.+|+-
T Consensus 45 ~rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 45 SVCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred CeEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 3567788776544 55788899999999964
No 297
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=48.56 E-value=75 Score=24.13 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=41.7
Q ss_pred CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCC-C----ccccHhHHHHHHHHHHHHhcCC
Q 017221 91 LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAE-V----PSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 91 ~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~-~----~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
-+...|+..+..+.+.|++.+++-.-|++.....+. . ......+.++.+.+..+..|.+
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 356689999999999999999888888776543221 0 1123456777777777777776
No 298
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.50 E-value=1.4e+02 Score=25.29 Aligned_cols=87 Identities=21% Similarity=0.121 Sum_probs=50.2
Q ss_pred HHHHHHHhCCcEEEEeCCCCCCCCCCCCCC----ccccHhHHHHHHHHHHHHhcCC----CCcEEEEEeCh---------
Q 017221 98 HQITALASLGYRAVAPDLRGYGDTDAPAEV----PSYTCLHLVGDVIALLDAVAAD----QEKVFVVGHDW--------- 160 (375)
Q Consensus 98 ~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~----~~~~~~~~~~d~~~~l~~l~~~----~~~~~l~G~S~--------- 160 (375)
..+..|.+.||.|+++|..-.|........ ..-++.| .+-+.++++...++ -.-...+|-|+
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 557778889999999999877766543321 1112221 12344555555544 01123566664
Q ss_pred ---HHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 161 ---GALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 161 ---Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
|....+..+.++ .|+.+|..+++..
T Consensus 94 Nv~gTl~Ll~am~~~--gv~~~vFSStAav 121 (329)
T COG1087 94 NVVGTLNLIEAMLQT--GVKKFIFSSTAAV 121 (329)
T ss_pred chHhHHHHHHHHHHh--CCCEEEEecchhh
Confidence 444445555554 3999999887654
No 299
>PRK13792 lysozyme inhibitor; Provisional
Probab=47.13 E-value=92 Score=22.38 Aligned_cols=7 Identities=29% Similarity=0.116 Sum_probs=2.8
Q ss_pred CcEEEEe
Q 017221 107 GYRAVAP 113 (375)
Q Consensus 107 g~~v~~~ 113 (375)
|-....+
T Consensus 104 G~eA~L~ 110 (127)
T PRK13792 104 GEEATLY 110 (127)
T ss_pred CCcEEEE
Confidence 3344444
No 300
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=47.01 E-value=1.7e+02 Score=24.55 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCcE--EEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHH
Q 017221 97 RHQITALASLGYR--AVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIA 165 (375)
Q Consensus 97 ~~~~~~L~~~g~~--v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a 165 (375)
...++.+.+.|.. =+.+|. |.|.+.... .++ +..+.+..+ +.++ ...++|+|-=.++.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n~-~ll~~l~~l-~~lg----~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HNY-QLLARLAEF-HHFN----LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HHH-HHHHHHHHH-HhCC----CCEEEEecccHHHH
Confidence 3344556667875 677784 777543211 111 122222222 2233 45899999655554
No 301
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=46.78 E-value=1.5e+02 Score=24.68 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=38.7
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEE
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~ 156 (375)
-.+++--.|.+...-..++..+. ++.++-++.. ..++..++-+|+..++...|++.++++++
T Consensus 33 h~LLvG~~GsGr~sl~rLaa~i~--~~~~~~i~~~-----------~~y~~~~f~~dLk~~~~~ag~~~~~~vfl 94 (268)
T PF12780_consen 33 HALLVGVGGSGRQSLARLAAFIC--GYEVFQIEIT-----------KGYSIKDFKEDLKKALQKAGIKGKPTVFL 94 (268)
T ss_dssp EEEEECTTTSCHHHHHHHHHHHT--TEEEE-TTTS-----------TTTHHHHHHHHHHHHHHHHHCS-S-EEEE
T ss_pred CeEEecCCCccHHHHHHHHHHHh--ccceEEEEee-----------CCcCHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 44444333334444455555554 5899888743 45789999999999999998875555443
No 302
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=46.61 E-value=2.1e+02 Score=25.43 Aligned_cols=100 Identities=12% Similarity=0.049 Sum_probs=54.5
Q ss_pred CEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh-cCCCCcEEEE
Q 017221 81 PLILFIHGFPL---LWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV-AADQEKVFVV 156 (375)
Q Consensus 81 ~~il~~hG~~~---~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l-~~~~~~~~l~ 156 (375)
.++|+++-+.. .......-+..|.+.|+.|+-+. +|+=.+.........+.+++.+.+.+.+... ..+.+++.+.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vlit 191 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLIT 191 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEEe
Confidence 46666665432 22244566778888888876654 3321111111113456777777777776541 2333477777
Q ss_pred Ee------------------ChHHHHHHHHHHhCCCccceEEEEccC
Q 017221 157 GH------------------DWGALIAWYLCLFRPDRVKALVNLSVV 185 (375)
Q Consensus 157 G~------------------S~Gg~~a~~~a~~~p~~v~~lil~~~~ 185 (375)
|- .+|..+|..++.+- ..++++.+.
T Consensus 192 ~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g~ 234 (390)
T TIGR00521 192 AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITGP 234 (390)
T ss_pred cCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCCC
Confidence 66 36667776666653 344555543
No 303
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=46.25 E-value=23 Score=31.19 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=27.7
Q ss_pred HHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEE
Q 017221 140 IALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALV 180 (375)
Q Consensus 140 ~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~li 180 (375)
.+.+...++. +-++.|-|.|+.+|..+|...++.+..++
T Consensus 102 ~kaL~e~gl~--p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 102 VKALWLRGLL--PRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHcCCC--CceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444565 55799999999999999997665554443
No 304
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=46.18 E-value=63 Score=24.73 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=23.4
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
-|++.|.|.+...-..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 47778888776655667777777788888774
No 305
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=45.51 E-value=49 Score=24.78 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCCChhhH--HHHHHHHHhCCcEEEEeCC
Q 017221 80 GPLILFIHGFPLLWYSW--RHQITALASLGYRAVAPDL 115 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~--~~~~~~L~~~g~~v~~~d~ 115 (375)
++.+|++-|..++.-.- ..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 36899999998765532 4456678888999999984
No 306
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.20 E-value=22 Score=31.65 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=25.7
Q ss_pred HHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceE
Q 017221 143 LDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKAL 179 (375)
Q Consensus 143 l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~l 179 (375)
+...++. +-++.|.|.|+.+|..++...++++..+
T Consensus 89 L~e~gll--p~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 89 LLDADLL--PNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHhCCCC--CCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3333554 4579999999999999999766665444
No 307
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.95 E-value=1.2e+02 Score=27.12 Aligned_cols=71 Identities=13% Similarity=0.081 Sum_probs=49.6
Q ss_pred HHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCC--ccce
Q 017221 101 TALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPD--RVKA 178 (375)
Q Consensus 101 ~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~ 178 (375)
+.+.+.+|.|+.+|=.|- ..--+++.+++.++-+.+..+ .+.++--+|=|.-|...|..+-+ .+.|
T Consensus 176 ~~ak~~~~DvvIvDTAGR----------l~ide~Lm~El~~Ik~~~~P~--E~llVvDam~GQdA~~~A~aF~e~l~itG 243 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGR----------LHIDEELMDELKEIKEVINPD--ETLLVVDAMIGQDAVNTAKAFNEALGITG 243 (451)
T ss_pred HHHHHcCCCEEEEeCCCc----------ccccHHHHHHHHHHHhhcCCC--eEEEEEecccchHHHHHHHHHhhhcCCce
Confidence 344445566666665431 122346677777777777776 89999999999999999988755 3788
Q ss_pred EEEEc
Q 017221 179 LVNLS 183 (375)
Q Consensus 179 lil~~ 183 (375)
+|+.-
T Consensus 244 vIlTK 248 (451)
T COG0541 244 VILTK 248 (451)
T ss_pred EEEEc
Confidence 88764
No 308
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.64 E-value=23 Score=30.04 Aligned_cols=35 Identities=9% Similarity=0.106 Sum_probs=24.5
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccc
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVK 177 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~ 177 (375)
+.+...++. +-++.|-|.|+.+|..++...++.+.
T Consensus 88 kaL~e~gl~--p~~i~GsSaGAivaa~~~~~t~~El~ 122 (323)
T cd07231 88 RTLVEHQLL--PRVIAGSSVGSIVCAIIATRTDEELQ 122 (323)
T ss_pred HHHHHcCCC--CCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 333334555 55799999999999999986544443
No 309
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=44.48 E-value=28 Score=32.24 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=24.5
Q ss_pred HHHH-HHhcCCCCcEEEEEeChHHHHHHHHHHhC
Q 017221 140 IALL-DAVAADQEKVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 140 ~~~l-~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
.+++ +..|+. +-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~--Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIK--PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCC--CCEEeecCHHHHHHHHHhCCC
Confidence 3445 467788 779999999999998888655
No 310
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=44.38 E-value=2e+02 Score=24.39 Aligned_cols=88 Identities=14% Similarity=0.010 Sum_probs=53.7
Q ss_pred CChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHH
Q 017221 91 LLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 91 ~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~ 170 (375)
-+...++.+++.+.+.|.+-+.+- | |.... ...|.++..+-++.+++..+.+ -.+++|.+..-.-+.+.+.
T Consensus 23 iD~~~l~~li~~l~~~Gv~gi~v~--G---stGE~--~~Lt~eEr~~v~~~~~~~~~g~--~pvi~gv~~~t~~ai~~a~ 93 (296)
T TIGR03249 23 FDEAAYRENIEWLLGYGLEALFAA--G---GTGEF--FSLTPAEYEQVVEIAVSTAKGK--VPVYTGVGGNTSDAIEIAR 93 (296)
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEC--C---CCcCc--ccCCHHHHHHHHHHHHHHhCCC--CcEEEecCccHHHHHHHHH
Confidence 345567888899989888877652 2 11111 4567888887777788876544 4455665533444555554
Q ss_pred hCC-CccceEEEEccCCC
Q 017221 171 FRP-DRVKALVNLSVVFN 187 (375)
Q Consensus 171 ~~p-~~v~~lil~~~~~~ 187 (375)
..- -.+++++++.|...
T Consensus 94 ~a~~~Gadav~~~pP~y~ 111 (296)
T TIGR03249 94 LAEKAGADGYLLLPPYLI 111 (296)
T ss_pred HHHHhCCCEEEECCCCCC
Confidence 432 23788877666543
No 311
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=44.23 E-value=67 Score=30.76 Aligned_cols=78 Identities=21% Similarity=0.136 Sum_probs=45.9
Q ss_pred CCEEEEEcCCCC----------ChhhHHHHHHHHHhCCcEEEEeCCCC---CCCCCCCCCCccccHh----HHHHHHHHH
Q 017221 80 GPLILFIHGFPL----------LWYSWRHQITALASLGYRAVAPDLRG---YGDTDAPAEVPSYTCL----HLVGDVIAL 142 (375)
Q Consensus 80 ~~~il~~hG~~~----------~~~~~~~~~~~L~~~g~~v~~~d~~G---~G~S~~~~~~~~~~~~----~~~~d~~~~ 142 (375)
+-+||+.|.... +.+.+...++.|.++||+++.+|--= .|....+...-..|++ +....+..+
T Consensus 48 ~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlPI 127 (672)
T PRK14581 48 TFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYPL 127 (672)
T ss_pred ceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHHH
Confidence 456666776542 34568888999999999999998321 1222212211122333 355667778
Q ss_pred HHHhcCCCCcEEEEEe
Q 017221 143 LDAVAADQEKVFVVGH 158 (375)
Q Consensus 143 l~~l~~~~~~~~l~G~ 158 (375)
++..+.. .-+.++|.
T Consensus 128 LKkyg~p-ATfFvVg~ 142 (672)
T PRK14581 128 LKAYKWS-AVLAPVGT 142 (672)
T ss_pred HHHcCCC-EEEEEech
Confidence 8888775 24555553
No 312
>PHA02114 hypothetical protein
Probab=44.22 E-value=39 Score=22.58 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=28.6
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
.+||+=--+..+..-|-.++..|.+.||+|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 4777777788888899999999999999998753
No 313
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=44.15 E-value=0.81 Score=38.30 Aligned_cols=38 Identities=32% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCC
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDL 115 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~ 115 (375)
++-|.+++.||+++..+........++..++.+...+.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 35789999999998887766678888888888777764
No 314
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=43.88 E-value=44 Score=21.40 Aligned_cols=24 Identities=25% Similarity=0.196 Sum_probs=19.0
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCC
Q 017221 150 QEKVFVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 150 ~~~~~l~G~S~Gg~~a~~~a~~~p 173 (375)
++++-++|-|-|=.+|.+.++.+.
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CceEEEEecCCcccHHHHHHHHhc
Confidence 458999999999999988888763
No 315
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=42.94 E-value=1.5e+02 Score=23.28 Aligned_cols=22 Identities=32% Similarity=0.255 Sum_probs=18.2
Q ss_pred hHHHHHHHHHhCCcEEEEeCCC
Q 017221 95 SWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.=+.+...|+++|++|.+.|+.
T Consensus 26 IGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 26 IGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred HHHHHHHHHHhcCcEEEEeecc
Confidence 3467788899999999999875
No 316
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=42.79 E-value=65 Score=25.36 Aligned_cols=63 Identities=17% Similarity=0.070 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCCCC---hhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 79 QGPLILFIHGFPLL---WYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 79 ~~~~il~~hG~~~~---~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
..++++++||.... ...-..+...|.+.|..+...-++|-|..... .....+..+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN----PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC----chhHHHHHHHHHHHHHH
Confidence 36899999997643 23445677888887765555555544432111 11223455555555543
No 317
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=42.52 E-value=1.8e+02 Score=24.75 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=45.0
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeC----CCCCCCCC-CC----------------CCCccccHhHHHHHHH
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPD----LRGYGDTD-AP----------------AEVPSYTCLHLVGDVI 140 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d----~~G~G~S~-~~----------------~~~~~~~~~~~~~d~~ 140 (375)
.||++-|-.++.-+ .++-.|++++-.++..| ++|..--. .+ .....++..++.++..
T Consensus 5 ~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 5 KIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred cEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 36666665544432 34445555545788888 34432111 11 0125688999999999
Q ss_pred HHHHHhcCCCCcEEEEEeC
Q 017221 141 ALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S 159 (375)
+.++.+....+..+++|.|
T Consensus 83 ~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 83 KIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHCCCCEEEEeCc
Confidence 9999875544456777755
No 318
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=42.49 E-value=74 Score=26.63 Aligned_cols=50 Identities=14% Similarity=0.162 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHhcCCCCc-EEEEEeChHHHHHHHHHHhCCCccceEEEEc
Q 017221 133 LHLVGDVIALLDAVAADQEK-VFVVGHDWGALIAWYLCLFRPDRVKALVNLS 183 (375)
Q Consensus 133 ~~~~~d~~~~l~~l~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~ 183 (375)
+....-+..+++.+++++.. +-=+|..+||.. ..+|.++..+|.|+-+..
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCH
Confidence 34555667778888887444 444899999864 556666666677765433
No 319
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.37 E-value=42 Score=27.76 Aligned_cols=21 Identities=29% Similarity=0.145 Sum_probs=18.6
Q ss_pred EEEEeChHHHHHHHHHHhCCC
Q 017221 154 FVVGHDWGALIAWYLCLFRPD 174 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~p~ 174 (375)
.+.|.|.|+.++..++...+.
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred EEEEECHHHHhHHHHHhCCcc
Confidence 789999999999999988654
No 320
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=42.05 E-value=2.2e+02 Score=24.81 Aligned_cols=78 Identities=8% Similarity=-0.059 Sum_probs=47.5
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChH
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWG 161 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~G 161 (375)
-.++++|.-.+.+....+++.+...+..|=.+.+--.|.+... ..+ ++..+.+.+.++..|+. +.+..|.|
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~----~ps-~e~i~~f~~~L~~~Gi~----vtvR~~~G 329 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQ----RPS-PKRIQAFQRVLEQRGVA----VSVRASRG 329 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCC----CCC-HHHHHHHHHHHHHCCCe----EEEeCCCC
Confidence 4678999999999888888877654344433333223333221 122 23344555666666665 56789999
Q ss_pred HHHHHHH
Q 017221 162 ALIAWYL 168 (375)
Q Consensus 162 g~~a~~~ 168 (375)
.-+....
T Consensus 330 ~di~aaC 336 (345)
T PRK14457 330 LDANAAC 336 (345)
T ss_pred Cchhhcc
Confidence 7666543
No 321
>PF05643 DUF799: Putative bacterial lipoprotein (DUF799); InterPro: IPR008517 This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.
Probab=41.98 E-value=1.1e+02 Score=24.41 Aligned_cols=33 Identities=18% Similarity=0.025 Sum_probs=22.0
Q ss_pred EEEEEcCCCCChh------hHHHHHHHHHhCCcEEEEeC
Q 017221 82 LILFIHGFPLLWY------SWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 82 ~il~~hG~~~~~~------~~~~~~~~L~~~g~~v~~~d 114 (375)
.|+.++-.-.+.+ ....+...|+++||-|+=+.
T Consensus 37 SILVlPp~N~S~dV~A~~~~ls~~~~PLAe~GYYV~Pv~ 75 (215)
T PF05643_consen 37 SILVLPPVNESPDVKAAYYVLSTVTYPLAEKGYYVFPVA 75 (215)
T ss_pred eEEEeCCCCCCcccchHHHHHHHHHHHHHhCCceecCHH
Confidence 5777776543332 34556778999999997654
No 322
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=41.83 E-value=31 Score=31.96 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=34.6
Q ss_pred cc-cccEEEEecCCCcCCCCCCchhhhhcCccccc--c--CCceeEEEecCCCCCC
Q 017221 306 QI-KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKA--V--PLLEEVIVMEGVGHFI 356 (375)
Q Consensus 306 ~~-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~gH~~ 356 (375)
++ ..|.+++||..|.++|.....+-+.. +.+. . ... .+++++++-|+-
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~--ln~~~eG~~s~l-rYyeV~naqHfD 604 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLG--LNRQVEGRASRL-RYYEVTNAQHFD 604 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHH--Hhhhhcccccce-eEEEecCCeech
Confidence 45 67999999999999999888765533 2221 1 233 677888988875
No 323
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=41.64 E-value=24 Score=30.07 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=16.5
Q ss_pred EEEEeChHHHHHHHHHHhC
Q 017221 154 FVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~ 172 (375)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4679999999999999754
No 324
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=41.51 E-value=76 Score=27.52 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=35.6
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAA 148 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~ 148 (375)
.+++.+-|+-.|+- .+..|.++||.|+.+-+..+..... ...+..+...|+..+.+.+|+
T Consensus 5 kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 5 KVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred EEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCC
Confidence 45555555544432 3556778899999999887765111 123344455566666666655
No 325
>PRK09936 hypothetical protein; Provisional
Probab=40.95 E-value=1.1e+02 Score=25.57 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=37.2
Q ss_pred ChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 92 LWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 92 ~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
+...|+.+...+...|++.+++-+-++|.|+... -+-+.....+.....|++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl~ 87 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGLK 87 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCCE
Confidence 5678999999999999999999999999885433 133344444444444543
No 326
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=40.76 E-value=1.8e+02 Score=23.05 Aligned_cols=86 Identities=21% Similarity=0.195 Sum_probs=48.3
Q ss_pred CCCCEEEEEcCCCCChhhH-HHHHHHHHhC-CcEEEEeCCCCCCCCCCCC---C-----CccccHhHHHHH-----HHHH
Q 017221 78 GQGPLILFIHGFPLLWYSW-RHQITALASL-GYRAVAPDLRGYGDTDAPA---E-----VPSYTCLHLVGD-----VIAL 142 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~-~~~~~~L~~~-g~~v~~~d~~G~G~S~~~~---~-----~~~~~~~~~~~d-----~~~~ 142 (375)
++.+.|++++-.......| ..+...+.+. |+.+..++... ..+... . ...-+...+.+. +.+.
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 3467899998877654443 4566677888 89988887643 111000 0 000111122221 2233
Q ss_pred HHHhcCCCCcEEEEEeChHHHHHHH
Q 017221 143 LDAVAADQEKVFVVGHDWGALIAWY 167 (375)
Q Consensus 143 l~~l~~~~~~~~l~G~S~Gg~~a~~ 167 (375)
++..-.+ ...++|.|.|+++...
T Consensus 107 l~~~~~~--g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAALER--GVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHC--CCEEEEECHhHHhhCC
Confidence 3332223 5789999999998876
No 327
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=40.28 E-value=67 Score=28.39 Aligned_cols=38 Identities=29% Similarity=0.246 Sum_probs=29.5
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTD 122 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~ 122 (375)
|||+|+..- ..|+.+++.|.++|+.|.++-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788987543 24788999999999999998877765543
No 328
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=40.07 E-value=39 Score=28.48 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=22.4
Q ss_pred hcCCCCcEEEEEeChHHHHHHHHHHhCCCcc
Q 017221 146 VAADQEKVFVVGHDWGALIAWYLCLFRPDRV 176 (375)
Q Consensus 146 l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 176 (375)
.++. +-++.|.|.|+.+|..++....+++
T Consensus 94 ~~l~--~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 94 QDLL--PRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred cCCC--CCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3444 4479999999999999998765544
No 329
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=39.74 E-value=49 Score=27.36 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCCCCC--hhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 78 GQGPLILFIHGFPLL--WYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 78 g~~~~il~~hG~~~~--~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
+..|+||++.|+.++ ...-..++..|..+|++|+++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 346999999998754 445677888888899999998655
No 330
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=39.74 E-value=82 Score=22.63 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=11.4
Q ss_pred HHHHHHhCCcEEEEe
Q 017221 99 QITALASLGYRAVAP 113 (375)
Q Consensus 99 ~~~~L~~~g~~v~~~ 113 (375)
.+..|.+.|++|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 456788889998775
No 331
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=39.06 E-value=78 Score=23.58 Aligned_cols=49 Identities=24% Similarity=0.233 Sum_probs=31.7
Q ss_pred CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHH
Q 017221 107 GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYL 168 (375)
Q Consensus 107 g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~ 168 (375)
|-.|++.|.+| ...+.+++++.+..+-.. |-+ =.+++|.|.|=.=++..
T Consensus 67 ~~~vi~Ld~~G----------k~~sSe~fA~~l~~~~~~-G~~--i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRG----------KALSSEEFADFLERLRDD-GRD--ISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCC----------CcCChHHHHHHHHHHHhc-CCe--EEEEEeCcccCCHHHHH
Confidence 67899999986 345566666665554433 322 46778999986555544
No 332
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=38.91 E-value=2e+02 Score=22.92 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=22.4
Q ss_pred CEEEEEcCCCCChhhHHH-HHHHHHhCCc-EEEEeCCC
Q 017221 81 PLILFIHGFPLLWYSWRH-QITALASLGY-RAVAPDLR 116 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~-~~~~L~~~g~-~v~~~d~~ 116 (375)
.+|++.||...++..... +-..|.++|| .|++...-
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve 176 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVE 176 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 378888998876654433 3344667788 56555443
No 333
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=38.75 E-value=1.1e+02 Score=26.01 Aligned_cols=63 Identities=11% Similarity=0.060 Sum_probs=38.0
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
.++|.+.|+-.++- -+..|+++||.|..+-++.+-.-+... .....+.-.+|+..+.++|++.
T Consensus 7 ~VvvamSgGVDSsV----aa~Ll~~~g~~v~gv~M~nWd~~de~~--s~cp~e~D~~da~~Vc~~LnI~ 69 (377)
T KOG2805|consen 7 RVVVAMSGGVDSSV----AARLLAARGYNVTGVFMKNWDSLDEFG--SQCPAERDWKDAKRVCKQLNIP 69 (377)
T ss_pred eEEEEecCCchHHH----HHHHHHhcCCCeeEEeeeccccccccc--cCCCchhhHHHHHHHHHHhCCe
Confidence 35665665544432 245677889999999888773222222 2445556666777777777653
No 334
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=38.73 E-value=2.1e+02 Score=24.81 Aligned_cols=35 Identities=11% Similarity=-0.035 Sum_probs=24.9
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRG 117 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G 117 (375)
++...|.|++-..+..+++.|.+.|+.|..+-..+
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 34445677666666688999999999988875543
No 335
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=38.70 E-value=59 Score=25.76 Aligned_cols=65 Identities=22% Similarity=0.043 Sum_probs=41.8
Q ss_pred HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHH
Q 017221 100 ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWY 167 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~ 167 (375)
++.+++. ..+=.+-.+=-|.|.........+-.|-++|+-++++..+.+ -.-+=|.|.|+.++-.
T Consensus 56 i~lyaec-m~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~--~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 56 IDLYAEC-MGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEK--IPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHHH-hcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhh--CCCceeeehhhhHhHH
Confidence 4445554 333333333336665444224457778999999999998765 4478899999987743
No 336
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=37.93 E-value=87 Score=29.91 Aligned_cols=42 Identities=19% Similarity=0.073 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCCC---hhhHHHHHHHHHhCCcEEEEeCCCCCCCC
Q 017221 80 GPLILFIHGFPLL---WYSWRHQITALASLGYRAVAPDLRGYGDT 121 (375)
Q Consensus 80 ~~~il~~hG~~~~---~~~~~~~~~~L~~~g~~v~~~d~~G~G~S 121 (375)
+.+++++||.... .+.-..+...|...|..|-..-+|+-|.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 5789999998643 33455678888888887766666654444
No 337
>COG0218 Predicted GTPase [General function prediction only]
Probab=37.66 E-value=58 Score=25.52 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=10.7
Q ss_pred EEeeecCCCCEEEEEcCCCC
Q 017221 72 MHVAEKGQGPLILFIHGFPL 91 (375)
Q Consensus 72 l~~~~~g~~~~il~~hG~~~ 91 (375)
++|...++.-.+|=++|+|.
T Consensus 63 iNff~~~~~~~lVDlPGYGy 82 (200)
T COG0218 63 INFFEVDDELRLVDLPGYGY 82 (200)
T ss_pred eEEEEecCcEEEEeCCCccc
Confidence 44444444445555666663
No 338
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=37.09 E-value=1.1e+02 Score=23.32 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=21.6
Q ss_pred EEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 84 LFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 84 l~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
|++-|.|.+...-..+...|...|..+..++
T Consensus 36 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 66 (179)
T cd05005 36 IFVYGAGRSGLVAKAFAMRLMHLGLNVYVVG 66 (179)
T ss_pred EEEEecChhHHHHHHHHHHHHhCCCeEEEeC
Confidence 5666777776555666677777788888764
No 339
>PLN02748 tRNA dimethylallyltransferase
Probab=36.37 E-value=2.2e+02 Score=26.02 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=46.4
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeC----CCCCC------------------CCCCCCCCccccHhHHH
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASL-GYRAVAPD----LRGYG------------------DTDAPAEVPSYTCLHLV 136 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d----~~G~G------------------~S~~~~~~~~~~~~~~~ 136 (375)
.+.+|++-|-.++.-. .++..|+.+ +..++..| |+|.. ..-..+ ...++..++.
T Consensus 21 ~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p-~e~ysv~~F~ 97 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISP-SVEFTAKDFR 97 (468)
T ss_pred CCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCC-CCcCcHHHHH
Confidence 4456667775554432 344455554 56778777 34321 111111 1568999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeC
Q 017221 137 GDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 137 ~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
++....++.+....+-.+|+|.|
T Consensus 98 ~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 98 DHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHhcCCCeEEEcCh
Confidence 99999999876554456777755
No 340
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=36.35 E-value=53 Score=26.51 Aligned_cols=70 Identities=11% Similarity=0.095 Sum_probs=44.9
Q ss_pred CCEEEEEcCCCCC--hhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHH-HHHHHHHHhcCCCCcEEEE
Q 017221 80 GPLILFIHGFPLL--WYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVG-DVIALLDAVAADQEKVFVV 156 (375)
Q Consensus 80 ~~~il~~hG~~~~--~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~-d~~~~l~~l~~~~~~~~l~ 156 (375)
.|+||++.|+.++ ...-..+...|..+|++|.++..| +.++... -+-.+-+.+-.. .+|.++
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p--------------t~eE~~~p~lwRfw~~lP~~-G~i~IF 94 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP--------------SDRERTQWYFQRYVQHLPAA-GEIVLF 94 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC--------------CHHHHcChHHHHHHHhCCCC-CeEEEE
Confidence 5899999998754 345677888888899999998755 1222222 233444544332 377777
Q ss_pred EeChHHHH
Q 017221 157 GHDWGALI 164 (375)
Q Consensus 157 G~S~Gg~~ 164 (375)
=-|+=+-+
T Consensus 95 ~rSwY~~~ 102 (230)
T TIGR03707 95 DRSWYNRA 102 (230)
T ss_pred eCchhhhH
Confidence 77754443
No 341
>PRK11627 hypothetical protein; Provisional
Probab=36.25 E-value=2.1e+02 Score=22.41 Aligned_cols=12 Identities=17% Similarity=0.274 Sum_probs=9.5
Q ss_pred HHHHHHhCCcEE
Q 017221 99 QITALASLGYRA 110 (375)
Q Consensus 99 ~~~~L~~~g~~v 110 (375)
+.+.|..+||.+
T Consensus 84 l~~~l~~~G~~i 95 (192)
T PRK11627 84 LEKQMTARGYMI 95 (192)
T ss_pred HHHHHHHCCccc
Confidence 556788899988
No 342
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.29 E-value=75 Score=26.91 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhcCC--CCcEEEEEeC--hHHHHHHHHHHh
Q 017221 136 VGDVIALLDAVAAD--QEKVFVVGHD--WGALIAWYLCLF 171 (375)
Q Consensus 136 ~~d~~~~l~~l~~~--~~~~~l~G~S--~Gg~~a~~~a~~ 171 (375)
+..+.+++++.+++ .+++.++|.| ||-.++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 45677788887754 6799999987 999999998865
No 343
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=35.06 E-value=2.2e+02 Score=22.30 Aligned_cols=76 Identities=20% Similarity=0.147 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhC--C
Q 017221 96 WRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFR--P 173 (375)
Q Consensus 96 ~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~--p 173 (375)
.....+.+.++++.++.+|-+|... .-.+..+++.++++..... .++++=-+..+.-.+..+..+ .
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~--~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPD--EVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSS--EEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCc--cceEEEecccChHHHHHHHHHhhc
Confidence 3445566677789999999886542 2345667777788777555 677665555555554444433 1
Q ss_pred CccceEEEEc
Q 017221 174 DRVKALVNLS 183 (375)
Q Consensus 174 ~~v~~lil~~ 183 (375)
-.+.++|+--
T Consensus 140 ~~~~~lIlTK 149 (196)
T PF00448_consen 140 FGIDGLILTK 149 (196)
T ss_dssp SSTCEEEEES
T ss_pred ccCceEEEEe
Confidence 2478888653
No 344
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=35.03 E-value=49 Score=29.95 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=32.6
Q ss_pred hCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEE-----EEEeChHHHHHHHHHHhC
Q 017221 105 SLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVF-----VVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 105 ~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~-----l~G~S~Gg~~a~~~a~~~ 172 (375)
.+|.+++.+|--|.- + -.+-.+..-++.+..+ +|+ +.|.|.||++|..+...+
T Consensus 414 g~G~rILSiDGGGtr---G----------~~~lqiL~kieklsgK--pIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 414 GQGLRILSIDGGGTR---G----------LATLQILKKIEKLSGK--PIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCceEEEEecCCCcc---c----------hhHHHHHHHHHHhcCC--cHHHHHHHHhccCchHHHHHHHHhcC
Confidence 468888888843321 0 1122333334444443 543 789999999999988764
No 345
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=34.94 E-value=70 Score=26.11 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=18.2
Q ss_pred EEEEeChHHHHHHHHHHhCC
Q 017221 154 FVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~p 173 (375)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998764
No 346
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=34.60 E-value=2.2e+02 Score=22.14 Aligned_cols=89 Identities=16% Similarity=0.204 Sum_probs=51.0
Q ss_pred EEEEEcCCCCChhhHHHHHHH----HHhCCcEEEEeCCCCCC-CCCCC---------CCCccccHhHHHHHHHHHHHHhc
Q 017221 82 LILFIHGFPLLWYSWRHQITA----LASLGYRAVAPDLRGYG-DTDAP---------AEVPSYTCLHLVGDVIALLDAVA 147 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~----L~~~g~~v~~~d~~G~G-~S~~~---------~~~~~~~~~~~~~d~~~~l~~l~ 147 (375)
.||=..|.+..-.-|+.+++. |.++|+.|.++-..... ..... +....-+...+.-|+..++..+.
T Consensus 5 aIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~ 84 (185)
T PF09314_consen 5 AIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALR 84 (185)
T ss_pred EEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHH
Confidence 345556777655556555555 45567777666544322 22110 01122246778888888887773
Q ss_pred C------CCCcEEEEEeChHHHHHHHHHH
Q 017221 148 A------DQEKVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 148 ~------~~~~~~l~G~S~Gg~~a~~~a~ 170 (375)
. +..-++++|.+.|+.+....-.
T Consensus 85 ~~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 85 FIKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred HHhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 2 1224677899989887765544
No 347
>TIGR03586 PseI pseudaminic acid synthase.
Probab=33.51 E-value=3.2e+02 Score=23.65 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGY-RAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~-~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
+.+|++--|+ .+...|...++.+.+.|. .++... +-|..+......++. . ...++..-.- +|.+..|
T Consensus 134 gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~----~-i~~lk~~f~~--pVG~SDH 201 (327)
T TIGR03586 134 GKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR----T-IPDLAERFNV--PVGLSDH 201 (327)
T ss_pred CCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH----H-HHHHHHHhCC--CEEeeCC
Confidence 6788889998 588899999999988776 455543 233333311222222 1 2223322222 6778899
Q ss_pred ChHHHHHHHHHHhC
Q 017221 159 DWGALIAWYLCLFR 172 (375)
Q Consensus 159 S~Gg~~a~~~a~~~ 172 (375)
+.|-.+++...+.-
T Consensus 202 t~G~~~~~aAva~G 215 (327)
T TIGR03586 202 TLGILAPVAAVALG 215 (327)
T ss_pred CCchHHHHHHHHcC
Confidence 99976665555543
No 348
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=33.46 E-value=63 Score=25.85 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=13.4
Q ss_pred HHHHHhCCcEEEEeCCC
Q 017221 100 ITALASLGYRAVAPDLR 116 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~ 116 (375)
+..|+++|+.|+++|.-
T Consensus 52 a~~LA~~G~~V~avD~s 68 (218)
T PRK13255 52 MLWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHHhCCCeEEEEccC
Confidence 44577899999999953
No 349
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=33.00 E-value=73 Score=24.22 Aligned_cols=36 Identities=22% Similarity=0.149 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEe
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAP 113 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~ 113 (375)
.+.+.|+++-|-|.|..+=.-.+..|..+|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 346788888898887777777889999999998883
No 350
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=32.84 E-value=84 Score=23.54 Aligned_cols=62 Identities=16% Similarity=0.128 Sum_probs=33.7
Q ss_pred CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCCccceEEEEccCC
Q 017221 107 GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPDRVKALVNLSVVF 186 (375)
Q Consensus 107 g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 186 (375)
+-.+++.|-.| ...+..++++.+..+...-..+ =++++|.+.|=.-.+ -.+ .+..+.+++..
T Consensus 67 ~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~--i~F~IGG~~G~~~~~--~~~----a~~~lSLS~mT 128 (155)
T PF02590_consen 67 NDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSD--IVFIIGGADGLSEEV--RKR----ADEKLSLSKMT 128 (155)
T ss_dssp TSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-E--EEEEE-BTTB--HHH--HHH-----SEEEES-SS-
T ss_pred CCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCce--EEEEEecCCCCCHHH--Hhh----cCceEEEecCC
Confidence 57889999875 4567778888777776652223 577899999843322 222 33556566544
No 351
>PRK14974 cell division protein FtsY; Provisional
Probab=32.05 E-value=3.4e+02 Score=23.58 Aligned_cols=71 Identities=15% Similarity=0.072 Sum_probs=44.9
Q ss_pred HHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCC--Cccce
Q 017221 101 TALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRP--DRVKA 178 (375)
Q Consensus 101 ~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~ 178 (375)
+.....|+.++.+|-.|.... -.++.+.+..+.+....+ .++++.-+.-|.=+..-+..+. -.+.+
T Consensus 216 ~~~~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd--~~iLVl~a~~g~d~~~~a~~f~~~~~~~g 283 (336)
T PRK14974 216 EHAKARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPD--LVIFVGDALAGNDAVEQAREFNEAVGIDG 283 (336)
T ss_pred HHHHhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCc--eEEEeeccccchhHHHHHHHHHhcCCCCE
Confidence 334456799999998865532 234556666666666555 6777776666766666555442 24777
Q ss_pred EEEEc
Q 017221 179 LVNLS 183 (375)
Q Consensus 179 lil~~ 183 (375)
+|+.-
T Consensus 284 iIlTK 288 (336)
T PRK14974 284 VILTK 288 (336)
T ss_pred EEEee
Confidence 77653
No 352
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.85 E-value=25 Score=28.31 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCC
Q 017221 80 GPLILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 80 ~~~il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.|+||++.|+.+++- .-..+...|..+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 479999999987654 4456666677789999999865
No 353
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.70 E-value=1.9e+02 Score=26.43 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=45.0
Q ss_pred HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh--------
Q 017221 100 ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF-------- 171 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~-------- 171 (375)
+++-..+||.|+.+|-.|.-. +-..+...+..+++.-..+ .|..+|.-+=|.=++.-+.+
T Consensus 459 I~~a~~~gfDVvLiDTAGR~~----------~~~~lm~~l~k~~~~~~pd--~i~~vgealvg~dsv~q~~~fn~al~~~ 526 (587)
T KOG0781|consen 459 IQEARNQGFDVVLIDTAGRMH----------NNAPLMTSLAKLIKVNKPD--LILFVGEALVGNDSVDQLKKFNRALADH 526 (587)
T ss_pred HHHHHhcCCCEEEEecccccc----------CChhHHHHHHHHHhcCCCc--eEEEehhhhhCcHHHHHHHHHHHHHhcC
Confidence 334445699999999776332 2223455666666665556 89999987777655544332
Q ss_pred -CCCccceEEEEc
Q 017221 172 -RPDRVKALVNLS 183 (375)
Q Consensus 172 -~p~~v~~lil~~ 183 (375)
.|..++++++.-
T Consensus 527 ~~~r~id~~~ltk 539 (587)
T KOG0781|consen 527 STPRLIDGILLTK 539 (587)
T ss_pred CCccccceEEEEe
Confidence 244577777653
No 354
>TIGR00752 slp outer membrane lipoprotein, Slp family. Slp superfamily members are present in the Gram-negative gamma proteobacteria Escherichia coli, which also contains a close paralog, Haemophilus influenzae and Pasteurella multocida and Vibrio cholera. The known members of the family to date share a motif LX[GA]C near the N-terminus, which is compatible with the possibility that the protein is modified into a lipoprotein with Cys as the new N-terminus. Slp from Escherichia coli is known to be a lipoprotein of the outer membrane and to be expressed in response to carbon starvation.
Probab=31.55 E-value=95 Score=24.01 Aligned_cols=21 Identities=10% Similarity=0.124 Sum_probs=14.0
Q ss_pred ceeEEEECCeEEEeeecCCCC
Q 017221 61 QHKVVNVNGINMHVAEKGQGP 81 (375)
Q Consensus 61 ~~~~~~~~g~~l~~~~~g~~~ 81 (375)
..+.+..+|.-+......++.
T Consensus 47 ~G~~Vr~GG~I~~v~N~~~~T 67 (182)
T TIGR00752 47 VGQTARFGGKVVNVTNLANQT 67 (182)
T ss_pred CCCEEEECCEEEEEEECCCce
Confidence 356778888877777655433
No 355
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=31.51 E-value=93 Score=25.48 Aligned_cols=20 Identities=35% Similarity=0.276 Sum_probs=17.6
Q ss_pred EEEEeChHHHHHHHHHHhCC
Q 017221 154 FVVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~p 173 (375)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999998754
No 356
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=31.50 E-value=3.2e+02 Score=23.04 Aligned_cols=87 Identities=17% Similarity=0.100 Sum_probs=53.0
Q ss_pred ChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 92 LWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 92 ~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+.+..+.+++.+.+.|..-+.+- | |.... ...+.++..+-++..++....+ -.+++|.+.+..-+..++..
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~--G---stGE~--~~Ls~eEr~~l~~~~~~~~~~~--~pvi~gv~~~t~~~i~~a~~ 89 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAA--G---GTGEF--FSLTPDEYAQVVRAAVEETAGR--VPVLAGAGYGTATAIAYAQA 89 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--c---CCcCc--ccCCHHHHHHHHHHHHHHhCCC--CCEEEecCCCHHHHHHHHHH
Confidence 44556778888888888777652 2 11111 4567788887888888876533 33445555455556665554
Q ss_pred CC-CccceEEEEccCCC
Q 017221 172 RP-DRVKALVNLSVVFN 187 (375)
Q Consensus 172 ~p-~~v~~lil~~~~~~ 187 (375)
.- -.+++++++.|...
T Consensus 90 a~~~Gad~v~~~pP~y~ 106 (289)
T cd00951 90 AEKAGADGILLLPPYLT 106 (289)
T ss_pred HHHhCCCEEEECCCCCC
Confidence 32 24788877666543
No 357
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.02 E-value=56 Score=24.67 Aligned_cols=72 Identities=11% Similarity=0.075 Sum_probs=42.9
Q ss_pred EEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC----CCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 85 FIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPA----EVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 85 ~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
++-|.|++..+-+.++.+|..+ |+--.+-+|.--.|.... -..+|.++.. ....++.++.. -=+++|.|-
T Consensus 45 l~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~--GDvLigIST 118 (176)
T COG0279 45 LACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQP--GDVLIGIST 118 (176)
T ss_pred EEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCC--CCEEEEEeC
Confidence 3558888888888999998876 665555555444342111 0023344332 34556666766 447888887
Q ss_pred HH
Q 017221 161 GA 162 (375)
Q Consensus 161 Gg 162 (375)
.|
T Consensus 119 SG 120 (176)
T COG0279 119 SG 120 (176)
T ss_pred CC
Confidence 66
No 358
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=31.01 E-value=1.5e+02 Score=23.51 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCCChh---hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 80 GPLILFIHGFPLLWY---SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 80 ~~~il~~hG~~~~~~---~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
+.+|+++||-....- ..+...+.|.+.|.+|-.-.++|.|.+- ..+...++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhh
Confidence 357999999875533 3355677788888777777777666442 23455566666654
No 359
>PRK10449 heat-inducible protein; Provisional
Probab=30.75 E-value=2.1e+02 Score=20.98 Aligned_cols=12 Identities=25% Similarity=0.310 Sum_probs=6.9
Q ss_pred eeEEEECCeEEE
Q 017221 62 HKVVNVNGINMH 73 (375)
Q Consensus 62 ~~~~~~~g~~l~ 73 (375)
...++++|..+.
T Consensus 35 W~L~~i~G~~~~ 46 (140)
T PRK10449 35 FVLESVNGKPVT 46 (140)
T ss_pred EEEEEECCEEcC
Confidence 344556776664
No 360
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=30.67 E-value=3.4e+02 Score=23.09 Aligned_cols=86 Identities=17% Similarity=0.076 Sum_probs=52.4
Q ss_pred ChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHh
Q 017221 92 LWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 92 ~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
+.+.+..+++.+.+.|.+-+.+. | |.... ...+.++..+-+..+++..+.+ -.+++|.+.+-.-+..++..
T Consensus 26 D~~~l~~li~~l~~~Gv~Gi~~~----G-stGE~--~~Lt~eEr~~~~~~~~~~~~~~--~pvi~gv~~~t~~~i~~~~~ 96 (303)
T PRK03620 26 DEAAYREHLEWLAPYGAAALFAA----G-GTGEF--FSLTPDEYSQVVRAAVETTAGR--VPVIAGAGGGTAQAIEYAQA 96 (303)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC----c-CCcCc--ccCCHHHHHHHHHHHHHHhCCC--CcEEEecCCCHHHHHHHHHH
Confidence 44566778888888888777652 2 11111 4567888888888888876543 33455665444455555544
Q ss_pred CC-CccceEEEEccCC
Q 017221 172 RP-DRVKALVNLSVVF 186 (375)
Q Consensus 172 ~p-~~v~~lil~~~~~ 186 (375)
.- -.+++++++.|..
T Consensus 97 a~~~Gadav~~~pP~y 112 (303)
T PRK03620 97 AERAGADGILLLPPYL 112 (303)
T ss_pred HHHhCCCEEEECCCCC
Confidence 32 2478887766644
No 361
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=30.55 E-value=94 Score=23.17 Aligned_cols=29 Identities=21% Similarity=0.171 Sum_probs=20.0
Q ss_pred HHHHHhcCCCCcEEEEEeChHHHHHHHHH
Q 017221 141 ALLDAVAADQEKVFVVGHDWGALIAWYLC 169 (375)
Q Consensus 141 ~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a 169 (375)
+.++..+.....-.+.|.|.|+.++..++
T Consensus 18 ~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 18 SALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 33344444212557889999999999998
No 362
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=30.39 E-value=1.6e+02 Score=28.69 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=16.6
Q ss_pred cEEEEEeChHHHHHHHHHH
Q 017221 152 KVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~ 170 (375)
--++.|.|+||.++..+|.
T Consensus 67 ~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 67 VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CceEEeeCHHHHHHHHHHc
Confidence 4478899999999999987
No 363
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=29.38 E-value=74 Score=25.34 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=13.6
Q ss_pred HHHHHhCCcEEEEeCCC
Q 017221 100 ITALASLGYRAVAPDLR 116 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~ 116 (375)
+..|+++|+.|+++|.-
T Consensus 49 a~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 49 LAWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHHhCCCeEEEEeCC
Confidence 45677899999999953
No 364
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=29.36 E-value=2e+02 Score=23.59 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=21.8
Q ss_pred EEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCC
Q 017221 84 LFIHGFPLLWYSWRHQITALASLGYRAVAPDLRG 117 (375)
Q Consensus 84 l~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G 117 (375)
+++-|..+. .-..+++.|.++|++|+..+...
T Consensus 12 vlItG~s~g--IG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 12 IIVTGGSSG--IGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEeCCCCh--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 445554432 33567888999999999988653
No 365
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=29.30 E-value=2.4e+02 Score=25.14 Aligned_cols=103 Identities=17% Similarity=0.111 Sum_probs=56.2
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC-CCccccHhHHHHHHHHHHHHhcCC-CCcEEEEEeC
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPA-EVPSYTCLHLVGDVIALLDAVAAD-QEKVFVVGHD 159 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~-~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~l~G~S 159 (375)
.++++---.+-.+.-....+.+.+.|+-|.-.|..++=.--... +...+...++.....+.....+.. +.--+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 44444332222233334567777778999999987763221111 112333333333333333333322 3356788999
Q ss_pred hHHHHHHHHHHhCCC-ccceEEEEcc
Q 017221 160 WGALIAWYLCLFRPD-RVKALVNLSV 184 (375)
Q Consensus 160 ~Gg~~a~~~a~~~p~-~v~~lil~~~ 184 (375)
-||.++...++.-|+ .+.+.+.+++
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCC
Confidence 999999998888765 3455554443
No 366
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=29.05 E-value=1.4e+02 Score=23.16 Aligned_cols=14 Identities=29% Similarity=0.423 Sum_probs=10.3
Q ss_pred EEEeCCCCCCCCCCC
Q 017221 110 AVAPDLRGYGDTDAP 124 (375)
Q Consensus 110 v~~~d~~G~G~S~~~ 124 (375)
+|++| ||||..+.-
T Consensus 2 ~I~iD-pGHGg~d~G 15 (189)
T TIGR02883 2 IIVID-PGHGGIDGG 15 (189)
T ss_pred EEEEe-CCCCCCCCC
Confidence 56777 899987643
No 367
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=28.61 E-value=2e+02 Score=22.45 Aligned_cols=44 Identities=16% Similarity=0.041 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCCChhhH-HHHHHHHHh----CCcEEEEeCCCCCCCCC
Q 017221 79 QGPLILFIHGFPLLWYSW-RHQITALAS----LGYRAVAPDLRGYGDTD 122 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~-~~~~~~L~~----~g~~v~~~d~~G~G~S~ 122 (375)
..|.+++.-..|+....+ ..++..+.. ...+++.+|..|.+...
T Consensus 37 ~~~h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~ 85 (205)
T PF01580_consen 37 KNPHLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAP 85 (205)
T ss_dssp GS-SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGG
T ss_pred CCceEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccch
Confidence 345555555455444443 445666665 57999999999765443
No 368
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=28.56 E-value=2.6e+02 Score=23.85 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=39.6
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCCC----CC--CCCCCC---------------CCCccccHhHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASL-GYRAVAPDLR----GY--GDTDAP---------------AEVPSYTCLHLVGD 138 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~~----G~--G~S~~~---------------~~~~~~~~~~~~~d 138 (375)
+.++++-|-.++.-. .++..|++. +..++..|-. |. |-.... .....++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 456677776655432 345555554 5566766652 11 111000 00134677888888
Q ss_pred HHHHHHHhcCCCCcEEEE
Q 017221 139 VIALLDAVAADQEKVFVV 156 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~ 156 (375)
....++.....++..+++
T Consensus 82 a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 82 ALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHhCCCCEEEE
Confidence 888888764443344555
No 369
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=28.47 E-value=1.5e+02 Score=22.24 Aligned_cols=47 Identities=26% Similarity=0.328 Sum_probs=29.8
Q ss_pred CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHH
Q 017221 107 GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIA 165 (375)
Q Consensus 107 g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a 165 (375)
+-.+++.|-+| ...+..++++.+...... +.. +-.+++|-+.|=.-.
T Consensus 67 ~~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~-g~~-~i~F~IGGa~G~~~~ 113 (157)
T PRK00103 67 GARVIALDERG----------KQLSSEEFAQELERWRDD-GRS-DVAFVIGGADGLSPA 113 (157)
T ss_pred CCEEEEEcCCC----------CcCCHHHHHHHHHHHHhc-CCc-cEEEEEcCccccCHH
Confidence 35689999886 345666777777665332 221 256788988775433
No 370
>PLN03059 beta-galactosidase; Provisional
Probab=28.20 E-value=6.2e+02 Score=25.35 Aligned_cols=78 Identities=13% Similarity=0.152 Sum_probs=46.8
Q ss_pred cCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh---cC----CCCcEEEEEeC
Q 017221 87 HGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV---AA----DQEKVFVVGHD 159 (375)
Q Consensus 87 hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l---~~----~~~~~~l~G~S 159 (375)
|=+-...+.|+..+..+.+.|++++..=.+=...... + ..++++. ..|+.++++.. |+ ++.+.+-.=+.
T Consensus 52 HY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~-~--G~~dF~G-~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~ 127 (840)
T PLN03059 52 HYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPS-P--GNYYFED-RYDLVKFIKVVQAAGLYVHLRIGPYICAEWN 127 (840)
T ss_pred ccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCC-C--Ceeeccc-hHHHHHHHHHHHHcCCEEEecCCcceeeeec
Confidence 3344667899999999999999887733221111111 1 2344433 45666666554 31 23466566689
Q ss_pred hHHHHHHHH
Q 017221 160 WGALIAWYL 168 (375)
Q Consensus 160 ~Gg~~a~~~ 168 (375)
+||.-++..
T Consensus 128 ~GGlP~WL~ 136 (840)
T PLN03059 128 FGGFPVWLK 136 (840)
T ss_pred CCCCchhhh
Confidence 998877743
No 371
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=28.09 E-value=3.3e+02 Score=22.17 Aligned_cols=74 Identities=15% Similarity=0.021 Sum_probs=37.1
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
.|++++............+..+.+.|..|+.+|....+....+. -..+....+..+.+.+-..|.+ ++.+++..
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~~--V~~d~~~~~~~~~~~l~~~g~~--~i~~i~~~ 131 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVPH--VSTDDALAMRLAVRHLVALGHR--RIGFASGP 131 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCCE--EEECcHHHHHHHHHHHHHCCCc--eEEEEeCC
Confidence 45555543333223344566677778999999864333111111 1223334444444444444444 77777643
No 372
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=28.06 E-value=1e+02 Score=18.74 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=25.7
Q ss_pred cccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 338 KAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 338 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
+..|+ +++.+-++.++.-.|.++++.+.|.+|-++
T Consensus 23 e~~PD--TvItL~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 23 EETPD--TVITLTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EEcCC--eEEEEeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 45666 444454546777889999999999998764
No 373
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=27.96 E-value=62 Score=28.19 Aligned_cols=48 Identities=15% Similarity=0.274 Sum_probs=29.6
Q ss_pred HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 100 ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
+..|.++||.|+.+-++-+...+... ......+..+|+..+.+.|+++
T Consensus 17 A~LLk~~G~~V~Gv~m~~~~~~~~~~--~~c~~~~d~~~a~~va~~LgIp 64 (356)
T PF03054_consen 17 AALLKEQGYDVIGVTMRNWDEEDESG--KSCCSEEDIEDARRVAEKLGIP 64 (356)
T ss_dssp HHHHHHCT-EEEEEEEE-SS-SSSHH---HHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHhhcccceEEEEEEeccccccC--CCCCchhhHHHHHHHHHhcCCC
Confidence 45677889999999888766533222 1234556678888888888874
No 374
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.95 E-value=3.6e+02 Score=22.50 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCC
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGY 118 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~ 118 (375)
.+.+|++--|..++.+.|...++.+...|-.=+.+=.||.
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~ 172 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI 172 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3789999999999999999999999887763334445653
No 375
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=27.93 E-value=4.6e+02 Score=23.77 Aligned_cols=71 Identities=13% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHHHhCCC--ccc
Q 017221 100 ITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLCLFRPD--RVK 177 (375)
Q Consensus 100 ~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~ 177 (375)
++.+.+.+|.++.+|-+|.-. .-+.+.+.+..+.+....+ .++++--++-|.-+...+..+-+ .+.
T Consensus 175 l~~~~~~~~DvViIDTaGr~~----------~d~~lm~El~~i~~~~~p~--e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK----------QEDSLFEEMLQVAEAIQPD--NIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc----------chHHHHHHHHHHhhhcCCc--EEEEEeccccChhHHHHHHHHHhccCCc
Confidence 445555689999999997432 1223455555555554444 67777777767666666655532 367
Q ss_pred eEEEE
Q 017221 178 ALVNL 182 (375)
Q Consensus 178 ~lil~ 182 (375)
++|+-
T Consensus 243 g~IlT 247 (429)
T TIGR01425 243 SVIIT 247 (429)
T ss_pred EEEEE
Confidence 77764
No 376
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=27.89 E-value=2.5e+02 Score=20.73 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=25.8
Q ss_pred CCCCEEEEE-cCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 78 GQGPLILFI-HGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 78 g~~~~il~~-hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
|.+|.|++. .|..++..--.-+...|++.||.|+..-
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g 47 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLG 47 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecC
Confidence 566755555 5766666555556778889999998754
No 377
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=27.69 E-value=80 Score=27.39 Aligned_cols=19 Identities=16% Similarity=0.076 Sum_probs=15.4
Q ss_pred EEEEEeChHHHHHHHHHHh
Q 017221 153 VFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 153 ~~l~G~S~Gg~~a~~~a~~ 171 (375)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3689999999988887744
No 378
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=27.69 E-value=4.3e+02 Score=23.35 Aligned_cols=77 Identities=12% Similarity=0.010 Sum_probs=47.1
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHH
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGA 162 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg 162 (375)
.+++.|...+.++...+++.+......|=.+.+=-.+.+... ....+..+.+.+.++..|+. +.+..|.|.
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~~~~~~~~-----~ps~e~i~~F~~~L~~~Gi~----vtvR~~~G~ 353 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNSIVNIKFE-----PVCSSTRERFRDRLLDAGLQ----VTVRKSYGT 353 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeeccCCCCCCC-----CCCHHHHHHHHHHHHHCCCc----EEeeCCCCc
Confidence 578899998888888888887664333333322223333221 12334455666777766666 788899998
Q ss_pred HHHHHH
Q 017221 163 LIAWYL 168 (375)
Q Consensus 163 ~~a~~~ 168 (375)
-+...+
T Consensus 354 di~aAC 359 (368)
T PRK14456 354 TINAAC 359 (368)
T ss_pred chhhcC
Confidence 665443
No 379
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=27.54 E-value=97 Score=27.92 Aligned_cols=41 Identities=24% Similarity=0.213 Sum_probs=23.8
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCccccccCCceeEEEecCCCCCCCc
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGGFKKAVPLLEEVIVMEGVGHFINE 358 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 358 (375)
...|++.+|+.|+....... ....... ..+++||++|+.-+
T Consensus 376 ~tnviFtNG~~DPW~~lgv~---------~~~~~~~-~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVT---------SDSSDSV-PAIVIPGGAHCSDL 416 (434)
T ss_dssp --SEEEEEETT-CCGGGS-----------S-SSSSE-EEEEETT--TTGGG
T ss_pred CCeEEeeCCCCCCcccccCC---------CCCCCCc-ccEEECCCeeeccc
Confidence 35899999999998665421 1222333 56789999999743
No 380
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=27.43 E-value=2.6e+02 Score=22.56 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=46.3
Q ss_pred HHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHH----HHHHHHHhCCC
Q 017221 99 QITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGAL----IAWYLCLFRPD 174 (375)
Q Consensus 99 ~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~----~a~~~a~~~p~ 174 (375)
.++.|.+.+..|+..|+-|-...-..--....+.+++.+.+ .++++.+++--+-+.+|-+.|+. =|+.+...++
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l-~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~- 179 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSL-LLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE- 179 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHH-HHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC-
Confidence 35667777789999998864322110000112333333332 23344444433567899999875 4677777665
Q ss_pred ccceEEEEcc
Q 017221 175 RVKALVNLSV 184 (375)
Q Consensus 175 ~v~~lil~~~ 184 (375)
.+++|+..-
T Consensus 180 -~DalVl~vl 188 (275)
T COG1856 180 -PDALVLVVL 188 (275)
T ss_pred -CCeEEEEEE
Confidence 567776653
No 381
>PF11191 DUF2782: Protein of unknown function (DUF2782); InterPro: IPR021357 This is a bacterial family of proteins whose function is unknown.
Probab=27.40 E-value=2.1e+02 Score=19.67 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=11.3
Q ss_pred EEECCeEEE-eeecCCCCEEEEEcC
Q 017221 65 VNVNGINMH-VAEKGQGPLILFIHG 88 (375)
Q Consensus 65 ~~~~g~~l~-~~~~g~~~~il~~hG 88 (375)
++-++.++. |+..|.-..|-+.+.
T Consensus 44 ~~~~~~~ieEyRv~G~l~~IkV~P~ 68 (105)
T PF11191_consen 44 IEDGGSTIEEYRVNGQLYMIKVQPK 68 (105)
T ss_pred EecCCcEEEEEEECCeEeeEEEEeC
Confidence 333444443 555665444444443
No 382
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=27.23 E-value=1.2e+02 Score=22.23 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=25.4
Q ss_pred EEEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCCCCCCCCCC
Q 017221 83 ILFIHGFPLLWY--SWRHQITALASLGYRAVAPDLRGYGDTDA 123 (375)
Q Consensus 83 il~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~~G~G~S~~ 123 (375)
+|.+-|..++.- .-..++..|.++||+|.++=.-+||...-
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 455556554433 33678899999999998777777766543
No 383
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.95 E-value=31 Score=28.53 Aligned_cols=13 Identities=23% Similarity=0.790 Sum_probs=11.2
Q ss_pred CcEEEEEeChHHH
Q 017221 151 EKVFVVGHDWGAL 163 (375)
Q Consensus 151 ~~~~l~G~S~Gg~ 163 (375)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 4899999999964
No 384
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=26.79 E-value=56 Score=23.49 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=24.4
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
++...|.+|+-.-+-.++..|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555676777777778889999999999765444
No 385
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=26.75 E-value=1.4e+02 Score=25.73 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=26.4
Q ss_pred CCEEEEEcC-CCC-----ChhhHHHHHHHHHhCCcEEEEe
Q 017221 80 GPLILFIHG-FPL-----LWYSWRHQITALASLGYRAVAP 113 (375)
Q Consensus 80 ~~~il~~hG-~~~-----~~~~~~~~~~~L~~~g~~v~~~ 113 (375)
+|.|++.|| ..+ ..+.|..+++.|.++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 488999999 332 3457888999999999888876
No 386
>PTZ00445 p36-lilke protein; Provisional
Probab=26.73 E-value=3e+02 Score=22.02 Aligned_cols=68 Identities=18% Similarity=0.080 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHhCCcEEEEeCCCCC------CCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChH
Q 017221 94 YSWRHQITALASLGYRAVAPDLRGY------GDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWG 161 (375)
Q Consensus 94 ~~~~~~~~~L~~~g~~v~~~d~~G~------G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~G 161 (375)
+.-+.+.+.|.+.|..+++.|+=.- |.-..+......-......++..+++.+....-++.|+-+|--
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 3446678889999999999997321 2111111001111112233455555555433336888888854
No 387
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=26.66 E-value=3.7e+02 Score=22.28 Aligned_cols=93 Identities=17% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEeCCCCCCCCCC-CCCCccccHhHHHHHHHHHHHHhcCCCCcEEE-
Q 017221 79 QGPLILFIHGFPLLWYSWRHQITALASLGY-RAVAPDLRGYGDTDA-PAEVPSYTCLHLVGDVIALLDAVAADQEKVFV- 155 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~~~~~~~~L~~~g~-~v~~~d~~G~G~S~~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l- 155 (375)
.+.+|++--|..++.++|...++.+.+.|- +++.. .+| -|.. +......++.. +..+-+..+. ++.+
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~-~rG--~s~y~~~~~~~~dl~~----i~~lk~~~~~---pV~~d 200 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILC-ERG--IRTFEKATRNTLDLSA----VPVLKKETHL---PIIVD 200 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-ECC--CCCCCCCCcCCcCHHH----HHHHHHhhCC---CEEEc
Confidence 378999999999999999999999988776 44444 343 3332 21111222222 1122222232 6777
Q ss_pred EEeChH----HHHHHHHHHhCCCccceEEEEc
Q 017221 156 VGHDWG----ALIAWYLCLFRPDRVKALVNLS 183 (375)
Q Consensus 156 ~G~S~G----g~~a~~~a~~~p~~v~~lil~~ 183 (375)
-+||.| ...+...|.... .+|+++--
T Consensus 201 s~Hs~G~r~~~~~~~~aAva~G--a~gl~iE~ 230 (260)
T TIGR01361 201 PSHAAGRRDLVIPLAKAAIAAG--ADGLMIEV 230 (260)
T ss_pred CCCCCCccchHHHHHHHHHHcC--CCEEEEEe
Confidence 799988 133333333332 56765443
No 388
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=26.49 E-value=4.1e+02 Score=22.74 Aligned_cols=78 Identities=26% Similarity=0.312 Sum_probs=46.7
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeC----CCCCCC-CCCCC----------------CCccccHhHHHHH
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASL-GYRAVAPD----LRGYGD-TDAPA----------------EVPSYTCLHLVGD 138 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d----~~G~G~-S~~~~----------------~~~~~~~~~~~~d 138 (375)
+.++++-|-.++.-+ .++-.|+++ |-.|+..| ++|..- |.++. ....++..++.++
T Consensus 3 ~~~i~I~GPTAsGKT--~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~ 80 (308)
T COG0324 3 PKLIVIAGPTASGKT--ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRD 80 (308)
T ss_pred ccEEEEECCCCcCHH--HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHH
Confidence 455666665444332 334445544 66788888 344321 11110 0246788899999
Q ss_pred HHHHHHHhcCCCCcEEEEEeCh
Q 017221 139 VIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 139 ~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
+.+.++.....++-.+++|.|+
T Consensus 81 a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 81 ALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHhCCCCcEEEccHH
Confidence 9999988876555677888653
No 389
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=26.10 E-value=4e+02 Score=22.42 Aligned_cols=96 Identities=19% Similarity=0.095 Sum_probs=49.3
Q ss_pred EcCCCCChhhHHHHHHHHHhCCcEEEEe------CCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC-CCcEEEEEe
Q 017221 86 IHGFPLLWYSWRHQITALASLGYRAVAP------DLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD-QEKVFVVGH 158 (375)
Q Consensus 86 ~hG~~~~~~~~~~~~~~L~~~g~~v~~~------d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~l~G~ 158 (375)
+||.-|++.. +..|...|++|+++ +++|||...+.. ...+..+++.+-++..+.. .=..++-|+
T Consensus 11 v~G~vGn~AA----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v-----~~~e~l~~~l~~l~~~~~~~~~davltGY 81 (281)
T COG2240 11 VYGSVGNSAA----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV-----MPPEQLADLLNGLEAIDKLGECDAVLTGY 81 (281)
T ss_pred eecccccHhH----HHHHHHcCCceeeeceEEecCCCCCCCCCCcC-----CCHHHHHHHHHHHHhcccccccCEEEEcc
Confidence 5676666543 34566668876554 588999865543 2333333333333332211 114566674
Q ss_pred C----hHHHHHHHHHHhCCCccceEEEEccCCCCCC
Q 017221 159 D----WGALIAWYLCLFRPDRVKALVNLSVVFNPRN 190 (375)
Q Consensus 159 S----~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 190 (375)
= .+-.++-.+..-..+.-+.+++++|......
T Consensus 82 lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 82 LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 2 2222222222222233458899999887655
No 390
>PRK06490 glutamine amidotransferase; Provisional
Probab=26.09 E-value=3.6e+02 Score=21.96 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHHHHH
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAWYLC 169 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~~~a 169 (375)
.+...+.++++..-.. ++-++|.|+|..+...+.
T Consensus 70 ~wi~~~~~~i~~~~~~--~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 70 DFIRREIDWISVPLKE--NKPFLGICLGAQMLARHL 103 (239)
T ss_pred hHHHHHHHHHHHHHHC--CCCEEEECHhHHHHHHHc
Confidence 4455556666654434 567999999999887764
No 391
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.90 E-value=1.6e+02 Score=23.61 Aligned_cols=38 Identities=21% Similarity=0.148 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 78 GQGPLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
++.|..|++-|.....-. ..++.+|.+.||.|++--.+
T Consensus 4 ~~~~k~VlItgcs~GGIG-~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIG-YALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcchh-HHHHHHHHhCCeEEEEEccc
Confidence 445666667665543332 36788999999999997655
No 392
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.88 E-value=66 Score=27.92 Aligned_cols=18 Identities=39% Similarity=0.469 Sum_probs=15.7
Q ss_pred EEEEeChHHHHHHHHHHh
Q 017221 154 FVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~ 171 (375)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 567999999999999864
No 393
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.82 E-value=78 Score=22.01 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=26.1
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhC-CcEEEEeCC--CCCCCC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASL-GYRAVAPDL--RGYGDT 121 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~-g~~v~~~d~--~G~G~S 121 (375)
+|++.|.+++.-+ .+++.|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecceEEecccc
Confidence 5788888876653 456777776 899998887 444444
No 394
>PLN02840 tRNA dimethylallyltransferase
Probab=25.67 E-value=4.1e+02 Score=23.99 Aligned_cols=32 Identities=13% Similarity=0.136 Sum_probs=24.0
Q ss_pred ccccHhHHHHHHHHHHHHhcCCCCcEEEEEeC
Q 017221 128 PSYTCLHLVGDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 128 ~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
..++..++.++..+.++.+...++..+|+|.+
T Consensus 88 e~ySv~~F~~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 88 DDYSVGAFFDDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 46788999999999998876554455667654
No 395
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=25.42 E-value=1.5e+02 Score=21.00 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=11.0
Q ss_pred HHHHHhCCcEEEEe
Q 017221 100 ITALASLGYRAVAP 113 (375)
Q Consensus 100 ~~~L~~~g~~v~~~ 113 (375)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 35678889999876
No 396
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=25.28 E-value=2.3e+02 Score=24.69 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=38.0
Q ss_pred HHHHHHHHhCCcEEEEeCCCC------------CCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHH
Q 017221 97 RHQITALASLGYRAVAPDLRG------------YGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALI 164 (375)
Q Consensus 97 ~~~~~~L~~~g~~v~~~d~~G------------~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~ 164 (375)
+.+++.|.++|++|.++-+-- -=.|..|.+ ....+. ....++.+-.. ++-++|.|+|=.+
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGD--P~~~~~----~i~~ik~l~~~--~iPifGICLGHQl 262 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGD--PAPLDY----AIETIKELLGT--KIPIFGICLGHQL 262 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCC--hhHHHH----HHHHHHHHhcc--CCCeEEEcHHHHH
Confidence 367888999999988876431 112333332 123333 33333333333 5579999999987
Q ss_pred HHHHH
Q 017221 165 AWYLC 169 (375)
Q Consensus 165 a~~~a 169 (375)
...+.
T Consensus 263 lalA~ 267 (368)
T COG0505 263 LALAL 267 (368)
T ss_pred HHHhc
Confidence 66544
No 397
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.11 E-value=68 Score=27.00 Aligned_cols=19 Identities=37% Similarity=0.357 Sum_probs=16.6
Q ss_pred EEEEeChHHHHHHHHHHhC
Q 017221 154 FVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~ 172 (375)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5789999999999998754
No 398
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=24.79 E-value=4.1e+02 Score=22.17 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=25.7
Q ss_pred EEEEEcCC--CCChhhHHHHHHHHHhCCcEEEEeCCCCC
Q 017221 82 LILFIHGF--PLLWYSWRHQITALASLGYRAVAPDLRGY 118 (375)
Q Consensus 82 ~il~~hG~--~~~~~~~~~~~~~L~~~g~~v~~~d~~G~ 118 (375)
.+++.+++ ||.......+++.|.+.|+.|..+.....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 35555654 45555677889999888999888765443
No 399
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=24.66 E-value=5.3e+02 Score=23.39 Aligned_cols=23 Identities=22% Similarity=0.164 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCcEEEEeCCCCCC
Q 017221 97 RHQITALASLGYRAVAPDLRGYG 119 (375)
Q Consensus 97 ~~~~~~L~~~g~~v~~~d~~G~G 119 (375)
..+++.|.++|++|+++|....+
T Consensus 134 s~Lv~~Ll~~G~~V~~ldr~~~~ 156 (436)
T PLN02166 134 SHLVDKLIGRGDEVIVIDNFFTG 156 (436)
T ss_pred HHHHHHHHHCCCEEEEEeCCCCc
Confidence 46788898899999999975433
No 400
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=24.53 E-value=4.4e+02 Score=22.42 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=24.0
Q ss_pred EEEEEcCC--CCChhhHHHHHHHHHhCCcEEEEeCCCC
Q 017221 82 LILFIHGF--PLLWYSWRHQITALASLGYRAVAPDLRG 117 (375)
Q Consensus 82 ~il~~hG~--~~~~~~~~~~~~~L~~~g~~v~~~d~~G 117 (375)
.+++++|. ||.......+++.|.++|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 34455554 4444555678899988899988776544
No 401
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=24.40 E-value=1.3e+02 Score=23.05 Aligned_cols=32 Identities=22% Similarity=0.048 Sum_probs=20.8
Q ss_pred EEEcCCCCChh--hHHHHHHHHHhCCcEEEEeCC
Q 017221 84 LFIHGFPLLWY--SWRHQITALASLGYRAVAPDL 115 (375)
Q Consensus 84 l~~hG~~~~~~--~~~~~~~~L~~~g~~v~~~d~ 115 (375)
.+.++-||..- .-..++..|+++|++|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 34444443333 335678888899999999997
No 402
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.10 E-value=94 Score=26.53 Aligned_cols=19 Identities=32% Similarity=0.328 Sum_probs=16.8
Q ss_pred cEEEEEeChHHHHHHHHHH
Q 017221 152 KVFVVGHDWGALIAWYLCL 170 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~ 170 (375)
+..+.|||+|=+-|+.++.
T Consensus 86 p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 86 PDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CceeecccHhHHHHHHHcc
Confidence 7899999999999887775
No 403
>PLN02206 UDP-glucuronate decarboxylase
Probab=24.05 E-value=5.1e+02 Score=23.57 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYG 119 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G 119 (375)
..|++.-|.|. . =..+++.|.++|+.|+++|....+
T Consensus 120 ~kILVTGatGf-I--Gs~Lv~~Ll~~G~~V~~ld~~~~~ 155 (442)
T PLN02206 120 LRVVVTGGAGF-V--GSHLVDRLMARGDSVIVVDNFFTG 155 (442)
T ss_pred CEEEEECcccH-H--HHHHHHHHHHCcCEEEEEeCCCcc
Confidence 34554444332 2 246788899999999999865444
No 404
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=24.04 E-value=1.8e+02 Score=23.85 Aligned_cols=34 Identities=21% Similarity=0.111 Sum_probs=26.9
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
+.|+++-|-|.|..+=.-.+..|..+||+|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4577777877777776678889998999988775
No 405
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=23.97 E-value=1.3e+02 Score=24.39 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=22.0
Q ss_pred CCCEEEEEcCCCCCh-----hhHHHHHHHHHhCCcEEEEe
Q 017221 79 QGPLILFIHGFPLLW-----YSWRHQITALASLGYRAVAP 113 (375)
Q Consensus 79 ~~~~il~~hG~~~~~-----~~~~~~~~~L~~~g~~v~~~ 113 (375)
+++.|++.+|.+... +.|..+++.|.++|+.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 357888888887643 35677888898888787765
No 406
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=23.91 E-value=2.1e+02 Score=24.21 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=8.8
Q ss_pred cEEEEeCCCCCCCCCC
Q 017221 108 YRAVAPDLRGYGDTDA 123 (375)
Q Consensus 108 ~~v~~~d~~G~G~S~~ 123 (375)
-.+|++| ||||..+.
T Consensus 56 ~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 56 KRVVMLD-PGHGGIDT 70 (287)
T ss_pred CeEEEEE-CCCCCCCC
Confidence 4556666 66666543
No 407
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=23.83 E-value=1.5e+02 Score=22.18 Aligned_cols=46 Identities=17% Similarity=0.207 Sum_probs=29.3
Q ss_pred cEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHH
Q 017221 108 YRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDWGALIAW 166 (375)
Q Consensus 108 ~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~ 166 (375)
-.|++.|-+| ...+..++++.+.+.... +.+ -+.++|-+.|=.-.+
T Consensus 66 ~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~-g~~--i~FvIGGa~G~~~~v 111 (153)
T TIGR00246 66 AHVVTLDIPG----------KPWTTPQLADTLEKWKTD-GRD--VTLLIGGPEGLSPTC 111 (153)
T ss_pred CeEEEEcCCC----------CcCCHHHHHHHHHHHhcc-CCe--EEEEEcCCCcCCHHH
Confidence 4688889876 345666777777666332 222 567888887754443
No 408
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.64 E-value=2.1e+02 Score=24.41 Aligned_cols=17 Identities=29% Similarity=0.497 Sum_probs=14.8
Q ss_pred CCEEEEEcCCCCChhhH
Q 017221 80 GPLILFIHGFPLLWYSW 96 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~ 96 (375)
+|.++=+||+.|+.-.|
T Consensus 109 KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 109 KPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCeEEEecCCCCCchhH
Confidence 78999999999988766
No 409
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.55 E-value=91 Score=21.91 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=19.0
Q ss_pred hHHHHHHHHHhCCcEEEEeCCC
Q 017221 95 SWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 95 ~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.+..+++.|+++|+.|++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4667899999999999999964
No 410
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=23.45 E-value=4.4e+02 Score=22.12 Aligned_cols=83 Identities=17% Similarity=-0.003 Sum_probs=48.2
Q ss_pred EEEcCCCCCh-hhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHh----------------
Q 017221 84 LFIHGFPLLW-YSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAV---------------- 146 (375)
Q Consensus 84 l~~hG~~~~~-~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l---------------- 146 (375)
|+.+..+... ..+....+.|.+.||.|+..+.-...... ...+.++-++|+.++++.-
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~-----~a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga~r 77 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVLARDGY-----LAGTDEERAADLNAAFADPEIKAIWCARGGYGANR 77 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchhhhcCc-----cCCCHHHHHHHHHHHhhCCCCCEEEEcCCcCCHHH
Confidence 3445555444 66777788898889999988765433211 1234555666666554332
Q ss_pred -----c---CCCCcEEEEEeChHHHHHHHHHHh
Q 017221 147 -----A---ADQEKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 147 -----~---~~~~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
. ++..+-.++|+|==..+-+.+..+
T Consensus 78 lL~~ld~~~~~~~pK~~iGySDiTaL~~~l~~~ 110 (282)
T cd07025 78 LLPYLDYDLIRANPKIFVGYSDITALHLALYAK 110 (282)
T ss_pred hhhhCCHHHHhhCCeEEEEecHHHHHHHHHHHh
Confidence 1 112356788999766555444433
No 411
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=23.43 E-value=4.2e+02 Score=21.80 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCCChhh-HHHHHHHHHhCCc-EEEEeCCC
Q 017221 79 QGPLILFIHGFPLLWYS-WRHQITALASLGY-RAVAPDLR 116 (375)
Q Consensus 79 ~~~~il~~hG~~~~~~~-~~~~~~~L~~~g~-~v~~~d~~ 116 (375)
+.|.|++++-.++.... .+.+.+.|.+.|+ .|-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 46789999976655443 3455667777787 45566654
No 412
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=23.23 E-value=5.1e+02 Score=22.89 Aligned_cols=64 Identities=23% Similarity=0.109 Sum_probs=38.0
Q ss_pred CEEEEEcCCCC--ChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 81 PLILFIHGFPL--LWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 81 ~~il~~hG~~~--~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
..++++.|-.. ....+..+.+.|.+.|..+..+|-- . ...+. +.++.+.+.++..+.+ -|+-+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v----~------~~p~~-~~v~~~~~~~~~~~~D--~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV----E------PNPTT-TTVMEGAALAREEGCD--FVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc----c------CCCCH-HHHHHHHHHHHHcCCC--EEEEeC
Confidence 45666776543 4456778888898888888777511 1 11222 3445555566666666 555454
No 413
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=23.22 E-value=1.9e+02 Score=21.81 Aligned_cols=37 Identities=32% Similarity=0.310 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCC--CCcEEEEEeC--hHHHHHHHHHHh
Q 017221 135 LVGDVIALLDAVAAD--QEKVFVVGHD--WGALIAWYLCLF 171 (375)
Q Consensus 135 ~~~d~~~~l~~l~~~--~~~~~l~G~S--~Gg~~a~~~a~~ 171 (375)
-+..+.+++++.+.+ .+++.++|.| .|-.++..+..+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 455677777776643 6799999999 688888877776
No 414
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=23.19 E-value=1.9e+02 Score=23.30 Aligned_cols=40 Identities=15% Similarity=0.066 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCC
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGD 120 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~ 120 (375)
+.......+.++......-+..|.++|..+++.|.-||..
T Consensus 152 ~~~a~asPy~~~~~~l~~Aa~~L~~~gadlIvLDCmGYt~ 191 (221)
T PF07302_consen 152 VVVAAASPYEGDEEELAAAARELAEQGADLIVLDCMGYTQ 191 (221)
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 3444444444567777888899999999999999998763
No 415
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=23.12 E-value=4.6e+02 Score=22.16 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=54.9
Q ss_pred ceeEEEECCeEEEeeecC--CCCEEEEEc-------CCCCCh-hhHHHH-------HHHHH-hCCcEEEEeCCCCCCCCC
Q 017221 61 QHKVVNVNGINMHVAEKG--QGPLILFIH-------GFPLLW-YSWRHQ-------ITALA-SLGYRAVAPDLRGYGDTD 122 (375)
Q Consensus 61 ~~~~~~~~g~~l~~~~~g--~~~~il~~h-------G~~~~~-~~~~~~-------~~~L~-~~g~~v~~~d~~G~G~S~ 122 (375)
....+.++|.+-+|.-.. +.|++|-+- |.+... +.|..+ ++... +-|...+++.+-+.+
T Consensus 100 R~k~V~lGGera~y~FeePqPnppvVtfDVFD~p~pglpkpire~~~dVmedP~eWArk~Vk~fgadmvTiHlIsTd--- 176 (403)
T COG2069 100 RGKVVMLGGERAFYRFEEPQPNPPVVTFDVFDIPRPGLPKPIREHYDDVMEDPGEWARKCVKKFGADMVTIHLISTD--- 176 (403)
T ss_pred cceEEEecCcccccccCCCCCCCCeeEEEeccCCCCCCchhHHHHHHHHhhCHHHHHHHHHHHhCCceEEEEeecCC---
Confidence 346677888886664443 355555443 443322 233322 23332 337788888776433
Q ss_pred CCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 123 APAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 123 ~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
+. ....+..+.++.++++++.++.. +++|.|-
T Consensus 177 -Pk-i~D~p~~EAak~lEdvLqAVdvP----iiiGGSG 208 (403)
T COG2069 177 -PK-IKDTPAKEAAKTLEDVLQAVDVP----IIIGGSG 208 (403)
T ss_pred -cc-ccCCCHHHHHHHHHHHHHhcCcC----EEecCCC
Confidence 22 24557788999999999998876 6777774
No 416
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=23.04 E-value=1.5e+02 Score=25.62 Aligned_cols=85 Identities=12% Similarity=0.103 Sum_probs=51.9
Q ss_pred CEEEEEcCCCCC-------hhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcE
Q 017221 81 PLILFIHGFPLL-------WYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKV 153 (375)
Q Consensus 81 ~~il~~hG~~~~-------~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 153 (375)
..+|++|+-..+ .+.|..+.+.+.+. -.+-.+|....|..++.. +..+..+.-+++. +.+
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~-------d~DA~avR~F~~~-g~~---- 264 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDL-------DKDAQAVRLFVED-GHE---- 264 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCc-------hhhHHHHHHHHHc-CCc----
Confidence 478999976544 45898888888776 455667877777655433 3333344444433 333
Q ss_pred EEEEeChHHHHHHHHHHhCCCccceEEEEc
Q 017221 154 FVVGHDWGALIAWYLCLFRPDRVKALVNLS 183 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~~~p~~v~~lil~~ 183 (375)
+++..|+.=.+.+ |.++|.++-.++
T Consensus 265 ~~laQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 265 ILLAQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred eEeehhhhhhcch-----hhhccceeEEEe
Confidence 6667776555543 567777775555
No 417
>PRK05723 flavodoxin; Provisional
Probab=23.00 E-value=1.3e+02 Score=22.38 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=36.6
Q ss_pred EEEEEc--CCCCChhhHHHHHHHHHhC---CcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCC
Q 017221 82 LILFIH--GFPLLWYSWRHQITALASL---GYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAAD 149 (375)
Q Consensus 82 ~il~~h--G~~~~~~~~~~~~~~L~~~---g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~ 149 (375)
.|+++. |-|.-...|..+.+.|.+. ...=+.+-..|.|.|..+ ..+...++.+.+.++.+|.+
T Consensus 51 li~~~sT~G~Ge~Pd~~~~f~~~L~~~~~~~l~~~~~aVfGLGDs~Y~-----~~Fc~a~~~ld~~L~~lGA~ 118 (151)
T PRK05723 51 LLAVTSTTGMGELPDNLMPLYSAIRDQLPAAWRGLPGAVIALGDSSYG-----DTFCGGGEQMRELFAELGVR 118 (151)
T ss_pred EEEEECCCCCCCCchhHHHHHHHHHhcCccCCCCCEEEEEeEeCCcch-----HHHhHHHHHHHHHHHHCCCc
Confidence 344443 4555667888888777653 111111222355665321 24667788888888888876
No 418
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=22.93 E-value=81 Score=24.05 Aligned_cols=21 Identities=33% Similarity=0.156 Sum_probs=16.5
Q ss_pred cEEEEEeChHHHHHHHHHHhC
Q 017221 152 KVFVVGHDWGALIAWYLCLFR 172 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~ 172 (375)
--.+.|-|.||.+|+.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 446889999999998888763
No 419
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=22.56 E-value=1.4e+02 Score=30.82 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeChHHH
Q 017221 137 GDVIALLDAVAADQEKVFVVGHDWGAL 163 (375)
Q Consensus 137 ~d~~~~l~~l~~~~~~~~l~G~S~Gg~ 163 (375)
-.+.+++..+++. +=.++|||.|-+
T Consensus 570 iaLtDlLs~lgi~--PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 570 IALTDLLSCLGIR--PDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHhcCCC--CCcccccccchh
Confidence 3556677788888 778999998743
No 420
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.48 E-value=1.2e+02 Score=21.48 Aligned_cols=31 Identities=10% Similarity=0.218 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHH
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAW 166 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~ 166 (375)
+....+.-.+..++.+ .++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~--~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVK--HIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCC--EEEEEccCCCcHHHH
Confidence 4566777778888999 999999976665543
No 421
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=22.44 E-value=2.8e+02 Score=19.43 Aligned_cols=31 Identities=19% Similarity=0.066 Sum_probs=22.4
Q ss_pred EEEcCCCCChhhHHHHHHHHHhCCcEEEEeC
Q 017221 84 LFIHGFPLLWYSWRHQITALASLGYRAVAPD 114 (375)
Q Consensus 84 l~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d 114 (375)
|++-|.|.+...-..+...|...|..+...+
T Consensus 3 I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 33 (128)
T cd05014 3 VVVTGVGKSGHIARKIAATLSSTGTPAFFLH 33 (128)
T ss_pred EEEEeCcHhHHHHHHHHHHhhcCCCceEEcc
Confidence 5677888777666677777777788887764
No 422
>PRK04148 hypothetical protein; Provisional
Probab=22.13 E-value=1.6e+02 Score=21.52 Aligned_cols=21 Identities=19% Similarity=0.045 Sum_probs=17.3
Q ss_pred CcEEEEEeChHHHHHHHHHHh
Q 017221 151 EKVFVVGHDWGALIAWYLCLF 171 (375)
Q Consensus 151 ~~~~l~G~S~Gg~~a~~~a~~ 171 (375)
.++..+|...|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 479999999888888887754
No 423
>COG3621 Patatin [General function prediction only]
Probab=22.04 E-value=2e+02 Score=24.77 Aligned_cols=40 Identities=15% Similarity=0.302 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCC--CCcEEEE-EeChHHHHHHHHHHhCC
Q 017221 134 HLVGDVIALLDAVAAD--QEKVFVV-GHDWGALIAWYLCLFRP 173 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~--~~~~~l~-G~S~Gg~~a~~~a~~~p 173 (375)
.+-.++...+++...+ .+.+.++ |.|.||.+++.+|...+
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 3445566666664322 3356665 89999999999997654
No 424
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=22.00 E-value=3.4e+02 Score=23.37 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCCcEEEEEeChH--HHHHHHHHHhCCCccceEEEEccC
Q 017221 138 DVIALLDAVAADQEKVFVVGHDWG--ALIAWYLCLFRPDRVKALVNLSVV 185 (375)
Q Consensus 138 d~~~~l~~l~~~~~~~~l~G~S~G--g~~a~~~a~~~p~~v~~lil~~~~ 185 (375)
.+..++..+... +++|+|-|-= =.+=..++..+|++|.++.+=+..
T Consensus 267 ~l~nil~~~p~~--kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 267 SLRNILRRYPDR--KFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHhCCCc--eEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 344455555555 9999998732 244456677899999999776654
No 425
>cd01126 TraG_VirD4 The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.
Probab=21.93 E-value=2.7e+02 Score=24.62 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHhCCcEEEEeCCCCCCCCC
Q 017221 93 WYSWRHQITALASLGYRAVAPDLRGYGDTD 122 (375)
Q Consensus 93 ~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~ 122 (375)
.+.|......+.+.|+.|+++|..+...+.
T Consensus 35 ge~~~~t~~~r~~~G~~V~v~nP~~~~~~~ 64 (384)
T cd01126 35 GENFELTSEHRRALGRKVFVFDPTNPRGRT 64 (384)
T ss_pred hhHHHHHHHHHHHcCCeEEEEcCCCCCCCc
Confidence 345666677777789999999987765543
No 426
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=21.89 E-value=3.8e+02 Score=20.73 Aligned_cols=61 Identities=13% Similarity=0.130 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCC---ChhhHHHHHHHHHhCCcEEEEeCCCCC---CCCCCCCCCccccHhHHHHHHHHHHH
Q 017221 80 GPLILFIHGFPL---LWYSWRHQITALASLGYRAVAPDLRGY---GDTDAPAEVPSYTCLHLVGDVIALLD 144 (375)
Q Consensus 80 ~~~il~~hG~~~---~~~~~~~~~~~L~~~g~~v~~~d~~G~---G~S~~~~~~~~~~~~~~~~d~~~~l~ 144 (375)
+.++|+++-+.. .+-....-+..|.+.|+.|+-+. +|+ |..... ...+++++++.+...++
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHhc
Confidence 456666764321 12234556778888898887776 554 332211 24467777776666543
No 427
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=21.79 E-value=76 Score=27.00 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=15.1
Q ss_pred EEEEeChHHHHHHHHHH
Q 017221 154 FVVGHDWGALIAWYLCL 170 (375)
Q Consensus 154 ~l~G~S~Gg~~a~~~a~ 170 (375)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47799999999999886
No 428
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=21.74 E-value=2.2e+02 Score=23.95 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=20.0
Q ss_pred cHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 131 TCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 131 ~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
....+.+.+++.++....+.++++|+||
T Consensus 194 ~~~~Ql~WL~~~L~~a~~~~~~v~I~~H 221 (296)
T cd00842 194 DPAGQLQWLEDELQEAEQAGEKVWIIGH 221 (296)
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 3456777788888776544458889998
No 429
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=21.67 E-value=3e+02 Score=25.16 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=53.3
Q ss_pred CEEEEEcCCCCCh-hhHHHHHHHHHhCCcEEEEeCCCCCCCCCC--------CC------C---------CccccHhHHH
Q 017221 81 PLILFIHGFPLLW-YSWRHQITALASLGYRAVAPDLRGYGDTDA--------PA------E---------VPSYTCLHLV 136 (375)
Q Consensus 81 ~~il~~hG~~~~~-~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~--------~~------~---------~~~~~~~~~~ 136 (375)
.-.+.+-|+.-.. ...+++.+.|...+.+.+.+++++.|+-.. |. + ....+-+.+-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 4566777866443 345678888888888888889988876532 11 0 0123555667
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeC
Q 017221 137 GDVIALLDAVAADQEKVFVVGHD 159 (375)
Q Consensus 137 ~d~~~~l~~l~~~~~~~~l~G~S 159 (375)
+|+.+++..+|.+ ++.++-|.
T Consensus 177 eDmmeIVqLLGk~--rVvfVTHV 197 (831)
T PRK15180 177 QDMMEIVQLLGRD--RVMFMTHV 197 (831)
T ss_pred HHHHHHHHHhCCC--cEEEEEee
Confidence 7888888888888 99999886
No 430
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=21.63 E-value=2.5e+02 Score=26.37 Aligned_cols=53 Identities=17% Similarity=0.211 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEe------ChHHHHHHHHHHhCCCccceEEEEccCCC
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGH------DWGALIAWYLCLFRPDRVKALVNLSVVFN 187 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 187 (375)
.-++++-..++.+-...++++++|| +.|+.+++..-+..-.+ .+.+.++|.-.
T Consensus 321 vRaRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~ 379 (655)
T COG3887 321 VRARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDM 379 (655)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcccc
Confidence 3455555555544333459999999 78999998777665444 66777776443
No 431
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=21.61 E-value=1.9e+02 Score=18.55 Aligned_cols=19 Identities=32% Similarity=0.246 Sum_probs=15.9
Q ss_pred HHHHHHHHHhCCcEEEEeC
Q 017221 96 WRHQITALASLGYRAVAPD 114 (375)
Q Consensus 96 ~~~~~~~L~~~g~~v~~~d 114 (375)
-..++..|++.|++|..+|
T Consensus 16 ~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 16 AANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHCCCeEEEEC
Confidence 3567788888899999999
No 432
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.57 E-value=2e+02 Score=24.37 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCC--CCcEEEEEeC--hHHHHHHHHHHh
Q 017221 136 VGDVIALLDAVAAD--QEKVFVVGHD--WGALIAWYLCLF 171 (375)
Q Consensus 136 ~~d~~~~l~~l~~~--~~~~~l~G~S--~Gg~~a~~~a~~ 171 (375)
+..+.+++++.+++ .+++.++|.| ||..+|.++...
T Consensus 142 p~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~ 181 (296)
T PRK14188 142 PLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA 181 (296)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC
Confidence 45667777877653 6799999966 899999998865
No 433
>COG3054 Predicted transcriptional regulator [General function prediction only]
Probab=21.49 E-value=2.5e+02 Score=20.93 Aligned_cols=43 Identities=12% Similarity=-0.034 Sum_probs=28.0
Q ss_pred eEEEECCeEEEeeecCC----CCEEEEEcCC--CCChhhHHHHHHHHHh
Q 017221 63 KVVNVNGINMHVAEKGQ----GPLILFIHGF--PLLWYSWRHQITALAS 105 (375)
Q Consensus 63 ~~~~~~g~~l~~~~~g~----~~~il~~hG~--~~~~~~~~~~~~~L~~ 105 (375)
..+.+++..+.|..+++ |++=|+-|=. ....+.-.++++.+..
T Consensus 38 GEl~l~~~~~~y~~W~SAqL~GKvRV~~hiAGRtsaKE~Na~lieaIk~ 86 (184)
T COG3054 38 GELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKS 86 (184)
T ss_pred ceEEecCcceeecccchhhccchhhhhhhhhcccchhhhchHHHHHHHh
Confidence 45677888899999886 5555556643 3445555667776654
No 434
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=21.42 E-value=1.6e+02 Score=20.75 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=24.3
Q ss_pred cEEEEE-eChHHHHHHHHHHhCCCccceEEEEcc
Q 017221 152 KVFVVG-HDWGALIAWYLCLFRPDRVKALVNLSV 184 (375)
Q Consensus 152 ~~~l~G-~S~Gg~~a~~~a~~~p~~v~~lil~~~ 184 (375)
|+.|+| ..+.|.-.+++...||+ +.-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578999 88999999999999875 555544443
No 435
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.41 E-value=1.8e+02 Score=24.51 Aligned_cols=37 Identities=14% Similarity=0.222 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhcCC--CCcEEEEEeC--hHHHHHHHHHHhC
Q 017221 136 VGDVIALLDAVAAD--QEKVFVVGHD--WGALIAWYLCLFR 172 (375)
Q Consensus 136 ~~d~~~~l~~l~~~--~~~~~l~G~S--~Gg~~a~~~a~~~ 172 (375)
+..+.+++++.+++ .+++.++|.| +|..++..+..+.
T Consensus 142 p~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~g 182 (284)
T PRK14179 142 PAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKN 182 (284)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCC
Confidence 34567777877754 6799999986 8999999988653
No 436
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=21.16 E-value=1.7e+02 Score=16.37 Aligned_cols=33 Identities=27% Similarity=0.240 Sum_probs=22.8
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHH
Q 017221 106 LGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDA 145 (375)
Q Consensus 106 ~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~ 145 (375)
.||.+.++|+||.-. ...+.++..+.+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT-------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHHH
Confidence 479999999997541 234677777777766653
No 437
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=21.15 E-value=1.2e+02 Score=25.81 Aligned_cols=63 Identities=22% Similarity=0.382 Sum_probs=45.2
Q ss_pred cccEEEEecCCCcCCCCCCchhhhhcCc-----------------------cccccCCceeEEEecCCCCCCCccChhHH
Q 017221 308 KVPVKFIVGDLDLTYNAPGTKDYINKGG-----------------------FKKAVPLLEEVIVMEGVGHFINEEKPDEV 364 (375)
Q Consensus 308 ~~P~lii~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 364 (375)
.+.+.|..|..|.+|.......|++.-. ..+...|. .+..++.+||+...++|+..
T Consensus 325 Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl-~f~wilraghmvp~Dnp~~a 403 (414)
T KOG1283|consen 325 GVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNL-SFFWILRAGHMVPADNPAAA 403 (414)
T ss_pred CceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccc-eeEEeecccCcccCCCHHHH
Confidence 4788899999999888877777665311 11333455 67778889999999999887
Q ss_pred HHHHHHH
Q 017221 365 NKHIYNF 371 (375)
Q Consensus 365 ~~~i~~f 371 (375)
...+..+
T Consensus 404 ~hmlr~v 410 (414)
T KOG1283|consen 404 SHMLRHV 410 (414)
T ss_pred hhheeec
Confidence 6665544
No 438
>PRK07053 glutamine amidotransferase; Provisional
Probab=20.90 E-value=4.6e+02 Score=21.28 Aligned_cols=83 Identities=20% Similarity=0.085 Sum_probs=43.3
Q ss_pred CEEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCC--CCCC---------C-Ccccc--HhHHHHHHHHHHHHh
Q 017221 81 PLILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDT--DAPA---------E-VPSYT--CLHLVGDVIALLDAV 146 (375)
Q Consensus 81 ~~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S--~~~~---------~-~~~~~--~~~~~~d~~~~l~~l 146 (375)
+.+|+-|--..+... +.+.|.+.|+.+-.++.- .|.. .... . ...++ ...+..+..++++..
T Consensus 4 ~ilviqh~~~e~~g~---i~~~L~~~g~~~~v~~~~-~~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~~ 79 (234)
T PRK07053 4 TAVAIRHVAFEDLGS---FEQVLGARGYRVRYVDVG-VDDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQR 79 (234)
T ss_pred eEEEEECCCCCCChH---HHHHHHHCCCeEEEEecC-CCccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHHH
Confidence 456777765555443 456666777666555321 1100 0000 0 00111 112344555666655
Q ss_pred cCCCCcEEEEEeChHHHHHHHHH
Q 017221 147 AADQEKVFVVGHDWGALIAWYLC 169 (375)
Q Consensus 147 ~~~~~~~~l~G~S~Gg~~a~~~a 169 (375)
-.. .+-++|.|+|..+...+.
T Consensus 80 ~~~--~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 80 LAA--GLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHC--CCCEEEECccHHHHHHHc
Confidence 433 456999999999887665
No 439
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=20.85 E-value=5.1e+02 Score=22.91 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=22.6
Q ss_pred EEEEcCCCCChhhHHHHHHHHHh---CCcEEEEeC
Q 017221 83 ILFIHGFPLLWYSWRHQITALAS---LGYRAVAPD 114 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~---~g~~v~~~d 114 (375)
|++..|-|.+..+.+..+..|.. -.|.|..++
T Consensus 3 VlVY~G~G~~~~sv~~~~~~Lr~~l~p~y~V~~v~ 37 (367)
T PF09825_consen 3 VLVYNGPGTSPESVRHTLESLRRLLSPHYAVIPVT 37 (367)
T ss_pred EEEEecCCCCHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 66778888888877777766542 248887776
No 440
>PLN03019 carbonic anhydrase
Probab=20.78 E-value=1.5e+02 Score=25.52 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHHHHH
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGALIAW 166 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~~a~ 166 (375)
.....++-.+..++++ .|+|+|||-=|.+..
T Consensus 200 ~v~aSIEYAV~~L~V~--~IVV~GHs~CGaVkA 230 (330)
T PLN03019 200 GVGAAIEYAVLHLKVE--NIVVIGHSACGGIKG 230 (330)
T ss_pred ccchhHHHHHHHhCCC--EEEEecCCCchHHHH
Confidence 3456788888999999 999999996554444
No 441
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.61 E-value=1.5e+02 Score=21.76 Aligned_cols=28 Identities=7% Similarity=0.211 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeChHHH
Q 017221 134 HLVGDVIALLDAVAADQEKVFVVGHDWGAL 163 (375)
Q Consensus 134 ~~~~d~~~~l~~l~~~~~~~~l~G~S~Gg~ 163 (375)
+....+.-.+..++.+ .++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l~~~--~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLLGTR--EIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHhCCC--EEEEEeecCCcc
Confidence 4556677777888998 999999974433
No 442
>PRK06523 short chain dehydrogenase; Provisional
Probab=20.54 E-value=3e+02 Score=22.34 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=21.5
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCC
Q 017221 83 ILFIHGFPLLWYSWRHQITALASLGYRAVAPDLR 116 (375)
Q Consensus 83 il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~ 116 (375)
.+++-|..+... ..+++.|.++|++|+..+..
T Consensus 11 ~vlItGas~gIG--~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG--AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh--HHHHHHHHHCCCEEEEEeCC
Confidence 345555443322 46788888899999998764
No 443
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=20.52 E-value=6.6e+02 Score=23.83 Aligned_cols=91 Identities=11% Similarity=-0.009 Sum_probs=42.1
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCC--ccccHhHHHHHHHHHHHHhcCC---CCcEE--
Q 017221 82 LILFIHGFPLLWYSWRHQITALASLGYRAVAPDLRGYGDTDAPAEV--PSYTCLHLVGDVIALLDAVAAD---QEKVF-- 154 (375)
Q Consensus 82 ~il~~hG~~~~~~~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~--~~~~~~~~~~d~~~~l~~l~~~---~~~~~-- 154 (375)
.+|++-|.+ +...-..+.+.+.++|+.+-++-.|..=..+-.... ...-++..++-+.+.+..+..+ ..+.+
T Consensus 193 ~LViIGGdd-S~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~~da~S~~k~~~~ 271 (568)
T PLN02251 193 GLVVIGGDD-SNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHF 271 (568)
T ss_pred EEEEeCCch-HHHHHHHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCEEEE
Confidence 455555444 334445666777777855444433433222211110 1234455555555555544322 22332
Q ss_pred --EEEeChHHHHHHHHHHhCC
Q 017221 155 --VVGHDWGALIAWYLCLFRP 173 (375)
Q Consensus 155 --l~G~S~Gg~~a~~~a~~~p 173 (375)
++|-+.|=..+....+.+|
T Consensus 272 VevMGR~aG~LAL~~aLat~p 292 (568)
T PLN02251 272 VRLMGRAASHITLECALQTHP 292 (568)
T ss_pred EEeCCCchHHHHHHHHHhhCC
Confidence 5677776544444444445
No 444
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=20.50 E-value=1.7e+02 Score=25.06 Aligned_cols=72 Identities=11% Similarity=0.206 Sum_probs=44.4
Q ss_pred EEEcCCCC-ChhhHHHHHHHHHhCCcEEEEeCCCCC-CCCC----CCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEE
Q 017221 84 LFIHGFPL-LWYSWRHQITALASLGYRAVAPDLRGY-GDTD----APAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVG 157 (375)
Q Consensus 84 l~~hG~~~-~~~~~~~~~~~L~~~g~~v~~~d~~G~-G~S~----~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G 157 (375)
|.+.|... +....+.+++.+.+.+.+.+++|.-+- |.-. .+...........+.|+.++++.++.+ .|.+++
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~--gIY~IA 79 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEH--GIYPIA 79 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHC--CCEEEE
Confidence 34555443 346688899999999999999999753 3221 111101112223357888888888776 566555
No 445
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=20.50 E-value=1.9e+02 Score=17.71 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=26.9
Q ss_pred cccCCceeEEEecCCCCCCCccChhHHHHHHHHHHhh
Q 017221 338 KAVPLLEEVIVMEGVGHFINEEKPDEVNKHIYNFFQK 374 (375)
Q Consensus 338 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 374 (375)
+..|+. ++..+.| .-+...|.-+++.+.|.+|-++
T Consensus 23 e~~PDt-tItLinG-kkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 23 EAFPDT-TITLING-KKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred hccCCc-EEEEEcC-cEEEEcccHHHHHHHHHHHHHH
Confidence 557886 7777754 6677778889999999988764
No 446
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=20.37 E-value=4.8e+02 Score=21.76 Aligned_cols=73 Identities=15% Similarity=0.198 Sum_probs=46.5
Q ss_pred CCEEEEEcCCCCChhhHHHHHHHHHhCCc-EEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCCcEEEEEe
Q 017221 80 GPLILFIHGFPLLWYSWRHQITALASLGY-RAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQEKVFVVGH 158 (375)
Q Consensus 80 ~~~il~~hG~~~~~~~~~~~~~~L~~~g~-~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~l~G~ 158 (375)
-|.+++.--++--......+.+.+.+.|. .++.+|+| . +..+++....+..+++ .+.++.-
T Consensus 95 ~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP--------~--------ee~~~~~~~~~~~gi~--~I~lvaP 156 (265)
T COG0159 95 VPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP--------P--------EESDELLKAAEKHGID--PIFLVAP 156 (265)
T ss_pred CCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC--------h--------HHHHHHHHHHHHcCCc--EEEEeCC
Confidence 36777766655444445667778887775 48888887 1 3445666777777787 7777766
Q ss_pred ChHHHHHHHHHH
Q 017221 159 DWGALIAWYLCL 170 (375)
Q Consensus 159 S~Gg~~a~~~a~ 170 (375)
+..---.-..+.
T Consensus 157 tt~~~rl~~i~~ 168 (265)
T COG0159 157 TTPDERLKKIAE 168 (265)
T ss_pred CCCHHHHHHHHH
Confidence 655444444443
No 447
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=20.16 E-value=4.4e+02 Score=20.73 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCCCChh------hHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCCccccHhHHHHHHHHHHHHhcCCCC
Q 017221 78 GQGPLILFIHGFPLLWY------SWRHQITALASLGYRAVAPDLRGYGDTDAPAEVPSYTCLHLVGDVIALLDAVAADQE 151 (375)
Q Consensus 78 g~~~~il~~hG~~~~~~------~~~~~~~~L~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 151 (375)
|.+++|||.|....... .+..+.+.+.++|..|+++..- ...+...+.+++.+..+ .++
T Consensus 24 g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D-----------~~~~~~~~~~~i~~~~~-~~~--- 88 (203)
T cd03016 24 GDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVD-----------SVESHIKWIEDIEEYTG-VEI--- 88 (203)
T ss_pred CCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECC-----------CHHHHHHHHhhHHHhcC-CCC---
Confidence 33457777775442222 3445666778889999888421 11223334444444332 233
Q ss_pred cEEEEEeChHHHHHHHHHHhCC-----CccceEEEEccCC
Q 017221 152 KVFVVGHDWGALIAWYLCLFRP-----DRVKALVNLSVVF 186 (375)
Q Consensus 152 ~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~ 186 (375)
++-++ ....+.++-.+....+ .-+++.+++++-.
T Consensus 89 ~fpil-~D~~~~ia~~yg~~~~~~~~~~~~r~~fiID~~G 127 (203)
T cd03016 89 PFPII-ADPDREVAKLLGMIDPDAGSTLTVRAVFIIDPDK 127 (203)
T ss_pred ceeEE-ECchHHHHHHcCCccccCCCCceeeEEEEECCCC
Confidence 33333 3344566655554432 2356677787653
No 448
>PRK06193 hypothetical protein; Provisional
Probab=20.05 E-value=1.7e+02 Score=23.18 Aligned_cols=31 Identities=23% Similarity=0.196 Sum_probs=23.8
Q ss_pred ccHhHHHHHHHHHHHHhcCCCCcEEEEEeCh
Q 017221 130 YTCLHLVGDVIALLDAVAADQEKVFVVGHDW 160 (375)
Q Consensus 130 ~~~~~~~~d~~~~l~~l~~~~~~~~l~G~S~ 160 (375)
.+.+.+.+++..+++.+..+.+++.+|||..
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp 165 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDPGTNTVLVGHDD 165 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCCCCeEEEEeCch
Confidence 4556667888888888865455899999995
Done!