BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017223
(375 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 28 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 87
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 88 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 147
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 207
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 208 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 267
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 268 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 327
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 328 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 387
Query: 373 A 373
A
Sbjct: 388 A 388
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 38 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 97
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 98 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 157
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 217
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 218 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 277
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 278 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 337
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 338 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 397
Query: 373 A 373
A
Sbjct: 398 A 398
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 93
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 214 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 334 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 393
Query: 373 A 373
A
Sbjct: 394 A 394
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 79 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 138
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 139 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 198
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 199 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 258
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 259 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 318
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 319 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 378
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 379 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 438
Query: 373 A 373
A
Sbjct: 439 A 439
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 253/361 (70%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 36 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 95
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 96 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 155
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 215
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 216 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 275
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 276 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 335
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 336 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 395
Query: 373 A 373
A
Sbjct: 396 A 396
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/350 (57%), Positives = 248/350 (70%), Gaps = 44/350 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 16 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 75
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+SYICSRYYRA
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 195
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 255
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 256 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 315
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHSA 373
+PN +LPNGR P LFNF + ++P L LIP H R Q S P +A
Sbjct: 316 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNA 365
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 251/358 (70%), Gaps = 46/358 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 13 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 72
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 73 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 132
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 192
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 193 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 252
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 253 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 312
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 370
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 313 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 370
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 413 bits (1061), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/361 (55%), Positives = 252/361 (69%), Gaps = 46/361 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 93
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 213
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 214 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 334 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 393
Query: 373 A 373
A
Sbjct: 394 A 394
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 252/362 (69%), Gaps = 46/362 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 71
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 251
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 252 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 311
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHS 372
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P +
Sbjct: 312 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTN 371
Query: 373 AG 374
A
Sbjct: 372 AA 373
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/358 (56%), Positives = 250/358 (69%), Gaps = 46/358 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 8 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 67
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 68 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 127
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 187
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 188 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 247
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 248 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 307
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 370
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 308 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 365
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/358 (56%), Positives = 250/358 (69%), Gaps = 46/358 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 19 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 78
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 79 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 138
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 198
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 199 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 258
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 259 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 318
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 370
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 319 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 376
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/358 (56%), Positives = 250/358 (69%), Gaps = 46/358 (12%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 71
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 191
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 251
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 252 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 311
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 370
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 312 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 369
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 407 bits (1045), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/339 (58%), Positives = 243/339 (71%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+SYICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 243/341 (71%), Gaps = 44/341 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+S ICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQ 364
+PN +LPNGR P LFNF + ++P L LIP H R Q
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 247/350 (70%), Gaps = 46/350 (13%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 63
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 64 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 123
Query: 176 PLIYVKLYTYQ-------------------------------------------VKGEAN 192
P+IYVKLY YQ V+GE N
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 183
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 252
+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVL
Sbjct: 184 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 243
Query: 253 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
GTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LE
Sbjct: 244 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 303
Query: 313 ACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
ACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 304 ACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 353
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 403 bits (1036), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 242/339 (71%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+S ICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 403 bits (1036), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 242/339 (71%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 12 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 71
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+S ICSRYYRA
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 191
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 251
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 252 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 312 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 350
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 241/339 (71%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+SYICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 241/341 (70%), Gaps = 44/341 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+SYICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQ 364
+PN +LPNGR P LFNF + ++P L LIP H R Q
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 241/339 (71%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KD ++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+S ICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 238/339 (70%), Gaps = 44/339 (12%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVP T+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
V+GE N+S ICSRYYRA
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR M
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDELR
Sbjct: 251 NPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 362
+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/337 (56%), Positives = 238/337 (70%), Gaps = 46/337 (13%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
GK GE ++ I+Y +V+G GSFG+VFQAK +E+ E VAIKKVLQD+R+KNRELQ+MR++
Sbjct: 32 GKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIV 89
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
HPNV+ LK F+S KDE+FLNLV+EYVPET+YR +HY+ + Q MP++ +KLY YQ
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 187 -------------------------------------------VKGEANISYICSRYYRA 203
+ GE N+S ICSRYYRA
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFGAT YTT+IDIWS GCV+AEL+ GQPLFPGE+ +DQLVEIIKVLGTP+RE+I+ M
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NPNY + +FPQI+ HP+ KVF R PP+AIDL SRLL+Y+PS R TA+EA HPFFDELR
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329
Query: 324 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEH 360
AR+PNGR PPLFN+ +E P+LI+RL+P+H
Sbjct: 330 TGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQH 366
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 253 bits (647), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 202/368 (54%), Gaps = 86/368 (23%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHC 138
Y + +GTGSFGIV + +E+G+ A+KKVLQD RYKNREL +M+++DH N+I L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 139 FFSTTSKD---------------------------------ELFLNLVMEYVPETMYRVL 165
F++T ++ +LN++MEYVP+T+++VL
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 166 KHYSSMNQRMPLIYVKLYTYQ--------------------------------------- 186
K + + +P+ + +Y YQ
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 187 ----VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
+ E +++ ICSR+YRAPEL+ GATEYT SID+WS GCV EL+LG+PLF GE ++
Sbjct: 189 AKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
Query: 243 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY 302
DQLV II+++GTPT+E++ MNP+YT+ RFP +KA W K+ + P AIDL ++L+Y
Sbjct: 249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308
Query: 303 SPSLRCTALEACAHPFFDELREP-------NARLPNG--RPFPPLFNFK-QELAGASPEL 352
P LR EA AHPFFD LR N+ P+G + P LFNF EL+ +
Sbjct: 309 EPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGNV 368
Query: 353 INRLIPEH 360
+NR++P++
Sbjct: 369 LNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 183/322 (56%), Gaps = 54/322 (16%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMR---LMDHP 130
K+ + ER+ G G+FG V K TG +VAIKKV+QD R++NRELQ+M+ ++ HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 131 NVISLKHCFFSTTSKD--ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV- 187
N++ L+ F++ +D +++LN+VMEYVP+T++R ++Y P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 188 --------------------------------------------KGEANISYICSRYYRA 203
E N++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PELIFG YTT++DIWS GC+ AE++LG+P+F G+N+ QL EI++VLG P+RE +R +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 264 NPNYTDFRFPQIKAHPWHKVFHK---RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
NP++TD K PW VF + EA DL S LLQY P R EA HP+FD
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 321 ELREPNARLPNGRPFP-PLFNF 341
EL +P +LPN + P LF F
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRF 341
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDH 129
+Y++ VG+G++G V A +GE VAIKK + R Y REL L++ M H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQH 100
Query: 130 PNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIY--------- 179
NVI L F +S + LVM ++ + +++ S + L+Y
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 180 ----------------------VKLYTYQVKGEAN---ISYICSRYYRAPELIFGATEYT 214
+K+ + + A+ Y+ +R+YRAPE+I Y
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 220
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---R 271
++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E ++ +N
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN 331
PQ + ++F R P+A DL ++L+ R TA +A HPFF+ R+P
Sbjct: 281 LPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEA 339
Query: 332 GRPF 335
+PF
Sbjct: 340 QQPF 343
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 143/304 (47%), Gaps = 49/304 (16%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDH 129
+Y++ VG+G++G V A +GE VAIKK + R Y REL L++ M H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQH 82
Query: 130 PNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIY--------- 179
NVI L F +S + LVM ++ + +++ S + L+Y
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 180 ----------------------VKLYTYQVKGEAN---ISYICSRYYRAPELIFGATEYT 214
+K+ + + A+ Y+ +R+YRAPE+I Y
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---R 271
++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E ++ +N
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN 331
PQ + ++F R P+A DL ++L+ R TA +A HPFF+ R+P
Sbjct: 263 LPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEA 321
Query: 332 GRPF 335
+PF
Sbjct: 322 QQPF 325
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVI 133
Y + +G G++G+V A VAIKK+ + + Y R E+Q++ H NVI
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP-LIYVKLYTYQVKGEAN 192
++ ++T + + +V + + +Y++LK N + +Y L + AN
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 193 ISY-----------------IC-----------------------SRYYRAPELIFGATE 212
+ + IC +R+YRAPE++ +
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYT 268
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYL 284
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 328
P W K+F K +A+DL R+L ++P+ R T EA AHP+ ++ +P
Sbjct: 285 Q-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDE 342
Query: 329 LPNGRPFPPLFNFKQELAGASPELINRLI-PEHVRRQTGL 367
P F F EL E + LI E R Q G+
Sbjct: 343 PVAEEP----FTFAMELDDLPKERLKELIFQETARFQPGV 378
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 158/338 (46%), Gaps = 60/338 (17%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEA 191
I++ + + ++ + ++ E + ++RV+ S + IY L +V +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 192 NI-----------------------------------------------SYICSRYYRAP 204
N+ Y+ +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-TREEIRCM 263
E++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP + ++RC+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 264 -NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
+P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 321 ELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 357
+PN P G P PP F F + + + +LI
Sbjct: 311 TYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 68/313 (21%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------REL 121
G G P+ ++ +G G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVK 181
L++ ++HPN++ L + L LV E++ + + + + +S +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 182 LYTYQ------------------------VKGEANISY-------------------ICS 198
Y +Q + E I + +
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 199 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 258
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 232
Query: 259 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 312
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 233 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 313 ACAHPFFDELREP 325
A AHPFF ++ +P
Sbjct: 288 ALAHPFFQDVTKP 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 68/313 (21%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------REL 121
G G P+ ++ +G G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVK 181
L++ ++HPN++ L + L LV E++ + + + + +S +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 182 LYTYQ------------------------VKGEANISY-------------------ICS 198
Y +Q + E I + +
Sbjct: 114 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 173
Query: 199 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 258
+YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-E 232
Query: 259 EIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALE 312
+ + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 233 VVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 313 ACAHPFFDELREP 325
A AHPFF ++ +P
Sbjct: 288 ALAHPFFQDVTKP 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 68/305 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 75 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 188 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 246
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P L
Sbjct: 247 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 301
Query: 330 PNGRP 334
RP
Sbjct: 302 RLERP 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 61/295 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y VG G++G+V++AK G VA+K++ D + RE+ L++ + HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV-KGEA 191
+SL S E L LV E++ + + +VL + Q +K+Y YQ+ +G A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVA 133
Query: 192 NI---------------------------------------SY---ICSRYYRAPELIFG 209
+ SY + + +YRAP+++ G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNY 267
+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP E + P +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 322
F + PW + E IDL S +L + P+ R +A +A HP+F +L
Sbjct: 254 KQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 61/295 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y VG G++G+V++AK G VA+K++ D + RE+ L++ + HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV-KGEA 191
+SL S E L LV E++ + + +VL + Q +K+Y YQ+ +G A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVA 133
Query: 192 NI---------------------------------------SY---ICSRYYRAPELIFG 209
+ SY + + +YRAP+++ G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNY 267
+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP E + P +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 322
F + PW + E IDL S +L + P+ R +A +A HP+F +L
Sbjct: 254 KQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 60/338 (17%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEA 191
I++ + + ++ + ++ E + ++RV+ S + IY L +V +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 192 NI-----------------------------------------------SYICSRYYRAP 204
N+ ++ +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-TREEIRCM 263
E++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP + ++RC+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 264 -NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
+P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 321 ELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 357
+PN P G P PP F F + + + +LI
Sbjct: 311 TYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E+V + + + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEHVDQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 141/307 (45%), Gaps = 51/307 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---------RELQLMRLMDHPNVISL 135
+G G F V++A+ T + VAIKK+ R + RE++L++ + HPN+I L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 136 KHCFFSTTSKDELF---------------LNLVMEYVPETMYRVLKHYSSMNQRMPL--- 177
F ++ +F L L ++ M L+ ++Q L
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137
Query: 178 -----------IYVKLYTYQVK---GEANISY---ICSRYYRAPELIFGATEYTTSIDIW 220
+KL + + G N +Y + +R+YRAPEL+FGA Y +D+W
Sbjct: 138 LKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMW 197
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI--RCMNPNYTDFR-FPQIKA 277
+ GC+LAELLL P PG++ +DQL I + LGTPT E+ C P+Y F+ FP I
Sbjct: 198 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI-- 255
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPP 337
P H +F + +DL L ++P R TA +A +F P RP P
Sbjct: 256 -PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCP 313
Query: 338 LFNFKQE 344
+ K++
Sbjct: 314 VETLKEQ 320
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 243
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 244
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 244
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 243
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 158/338 (46%), Gaps = 60/338 (17%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEA 191
I++ + + ++ + ++ E + ++RV+ S + IY L +V +
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 192 NISY-----------------------------------------------ICSRYYRAP 204
N+ + + +R+YRAP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-TREEIRCM 263
E++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP + ++RC+
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 264 -NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
+P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA HP+
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
Query: 321 ELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 357
+PN P G P PP F F + + + +LI
Sbjct: 311 TYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 243
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 243
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 75 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 188 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 246
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 247 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 244
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 158
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 159 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 218
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 219 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 277
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 278 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 336
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 337 ----FKFDMELDDLPKEKLKELIFEETAR 361
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 269
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 270 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 329 ----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 269
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 270 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 329 ----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 171 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 231 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 289
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 290 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 348
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 349 ----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 271
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 272 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 330
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 331 ----FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + LV + +Y++LK + S + +Y L + AN+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 170
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 171 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 231 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 289
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 290 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 348
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 349 ----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 269
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 270 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 329 ----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E+V + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEHVHQDLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 148
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 209 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 267
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 268 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 326
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 327 ----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + +S +PL +K Y +Q
Sbjct: 72 IHTENK-----LYLVFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 185 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 243
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 155
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 215
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 216 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 274
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 275 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 333
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 334 ----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 156
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 157 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 216
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 217 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 275
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 276 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 334
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 335 ----FKFDMELDDLPKEKLKELIFEETAR 359
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 147
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 148 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 207
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 208 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 266
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 267 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 325
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 326 ----FKFDMELDDLPKEKLKELIFEETAR 350
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 64/333 (19%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R E++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 271
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP----FFDELREPNARLP 330
PW+++F +A+DL ++L ++P R +A AHP ++D EP A P
Sbjct: 272 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAP 330
Query: 331 NGRPFPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 331 --------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 56/324 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V + +++G +A+KK ++ +R R
Sbjct: 41 ELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYR 99
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F TS +E ++L L ++V
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 219
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + ++QL +I+++ GTP I M
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
NY + PQ+ + VF P A+DL ++L R TA EA AHP+F
Sbjct: 280 PSHEARNYIN-SLPQMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
Query: 320 DELREPNARLPNGRPFPPLFNFKQ 343
+ +P+ P P+ F +Q
Sbjct: 338 SQYHDPDDE-PESEPYDQSFESRQ 360
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 62/332 (18%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R E++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 152
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 153 KPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC-MNPNYTDF--RFPQI 275
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C +N ++ P
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHK 272
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP----FFDELREPNARLPN 331
PW+++F +A+DL ++L ++P R +A AHP ++D EP A P
Sbjct: 273 NKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAP- 330
Query: 332 GRPFPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 331 -------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 148
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P +E++ C+ NY P
Sbjct: 209 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL-LSLPH 267
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 268 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 326
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 327 ----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAI+K+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 52/288 (18%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ--------DRRYKNRELQLMRLMDHPNVISLK 136
VG+G++G V A TG VAIKK+ + R Y REL+L++ M H NVI L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY--RELRLLKHMRHENVIGLL 90
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMP-LIY--------------- 179
F + D+ LVM ++ + +++KH R+ L+Y
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 180 ----------------VKLYTYQVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIW 220
+K+ + + +A+ + +R+YRAPE+I YT ++DIW
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP----NYTDFRFPQIK 276
S GC++AE++ G+ LF G + +DQL EI+KV GTP E ++ + NY P+++
Sbjct: 211 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK-GLPELE 269
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
+ + P A++L ++L R TA EA AHP+F+ L +
Sbjct: 270 KKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 141/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + +S +PL +K Y +Q
Sbjct: 74 IHTENK-----LYLVFEFLSMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 187 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 245
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 246 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 141/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + +S +PL +K Y +Q
Sbjct: 73 IHTENK-----LYLVFEFLSMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 186 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 244
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+ K+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 142/296 (47%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+ K+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 241
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 45/297 (15%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 137 HCFFSTTSKD---ELFL----------NLVM------EYVPETMYRVLKHYS-------- 169
F TS + E++L N+V E+V +Y++L+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 170 ---------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIW 220
++N+ L + + E Y+ +R+YRAPE++ Y ++DIW
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ + + P
Sbjct: 214 SVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQ 273
Query: 281 HKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPF 335
+ + P AIDL R+L R +A EA AH +F + +P P P+
Sbjct: 274 KDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEPY 329
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 45/297 (15%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 137 HCFFSTTSKD---ELFL----------NLVM------EYVPETMYRVLKHYS-------- 169
F TS + E++L N+V E+V +Y++L+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 170 ---------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIW 220
++N+ L + + E Y+ +R+YRAPE++ Y ++DIW
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ + + P
Sbjct: 214 SVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQ 273
Query: 281 HKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPF 335
+ + P AIDL R+L R +A EA AH +F + +P P P+
Sbjct: 274 KDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEPY 329
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 68/292 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------ 186
+ L LV E++ + + + + +S +PL +K Y +Q
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 187 ------------VKGEANISY-------------------ICSRYYRAPELIFGATEYTT 215
+ E I + + +YRAPE++ G Y+T
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR--FP 273
++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++ FP
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPSFP 242
Query: 274 QIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+ W + F K +PP + L S++L Y P+ R +A A AHPFF +
Sbjct: 243 K-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 45/297 (15%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 137 HCFFSTTSKD---ELFL----------NLVM------EYVPETMYRVLKHYS-------- 169
F TS + E++L N+V E+V +Y++L+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 170 ---------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIW 220
++N+ L + + E Y+ +R+YRAPE++ Y ++DIW
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ + + P
Sbjct: 206 SVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQ 265
Query: 281 HKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPF 335
+ + P AIDL R+L R +A EA AH +F + +P P P+
Sbjct: 266 KDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEPY 321
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANISY--- 195
+ T + + +V + + +Y++LK + S + +Y L + AN+ +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 154
Query: 196 --------------IC-----------------------SRYYRAPELIFGATEYTTSID 218
IC +R+YRAPE++ + YT SID
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 214
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 273
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 274 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 332
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 333 ----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANISY--- 195
+ T + + +V + + +Y++LK + S + +Y L + AN+ +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 155
Query: 196 --------------IC-----------------------SRYYRAPELIFGATEYTTSID 218
IC +R+YRAPE++ + YT SID
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 215
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY P
Sbjct: 216 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPH 274
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 275 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 333
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 334 ----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 81/329 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLM-RLMDHPN 131
Y + +G G++GIV+++ TGE VA+KK+ D + RE+ ++ L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 132 VISLKHCFFSTTSKDELFLNLVME------------------YVPETMYRVLKHYSS--- 170
+++L + + +D + ME YV + +V+K+ S
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 171 MNQRM----------------------PLIYVKLYTYQVKGEAN-------------ISY 195
+++ M + ++ T + N Y
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 255
+ +R+YRAPE++ G+T+YT ID+WS GC+L E+L G+P+FPG + ++QL II V+ P
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFP 250
Query: 256 TREEIRCMNPNYTDFRFPQIKAH-------------PWHKVFHKRMPP-----EAIDLAS 297
+ E++ + + +K W + K P EA+DL
Sbjct: 251 SNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310
Query: 298 RLLQYSPSLRCTALEACAHPFFDELREPN 326
+LLQ++P+ R +A +A HPF PN
Sbjct: 311 KLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE----IRCMNPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+ I NY P
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPH 269
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 270 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 329 ----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 56/329 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQVKGEANI----- 193
+ T + + +V + + +Y++LK + S + +Y L + AN+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDL 150
Query: 194 -----------------------------------SYICSRYYRAPELIFGATEYTTSID 218
Y+ +R+YRAPE++ + YT SID
Sbjct: 151 KPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE----IRCMNPNYTDFRFPQ 274
IWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+ I NY P
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPH 269
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+ P
Sbjct: 270 KNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP 328
Query: 335 FPPLFNFKQELAGASPELINRLIPEHVRR 363
F F EL E + LI E R
Sbjct: 329 ----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + Y + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 53/284 (18%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQ---DRRYKN---RELQLMRLMDHPNVISLKH 137
+VG GS+G+V + + +TG VAIKK L+ D+ K RE++L++ + H N+++L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL-- 89
Query: 138 CFFSTTSKDELFLNLVMEYVPETM------------YRVLKHY----------------- 168
K + LV E+V T+ Y+V++ Y
Sbjct: 90 ---LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 169 -SSMNQRMPLI----YVKL------YTYQVKGEANISYICSRYYRAPELIFGATEYTTSI 217
+ L+ VKL T GE + +R+YRAPEL+ G +Y ++
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQI 275
D+W+ GC++ E+ +G+PLFPG++ +DQL I+ LG P +E+ NP + R P+I
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI 266
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
K + + ++ IDLA + L P R E H FF
Sbjct: 267 KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 64/317 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHC 138
+G G++G+V A+ TG+ VAIKK V+ + + REL++++ H N+I++K
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 139 FFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVK--------- 188
T E + +V++ + +++++ +Q + L +V+ + YQ+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 189 ----------------------GEANIS----------------YICSRYYRAPELIFGA 210
G+ ++ Y+ +R+YRAPEL+
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+ I+ +
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRA 297
Query: 271 ---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 327
P + PW V+ +A+ L R+L++ PS R +A A HPF + +P+
Sbjct: 298 YIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDD 356
Query: 328 RLPNGRPFPPLFNFKQE 344
PF F F +E
Sbjct: 357 EPDCAPPFD--FAFDRE 371
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 59/291 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHC 138
+G GS+G+VF+ + +TG+ VAIKK L+ ++ RE+++++ + HPN+++L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISY--- 195
F + + L+LV EY T+ L Y + +P VK T+Q N +
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 196 ----------------------------------------ICSRYYRAPELIFGATEYTT 215
+ +R+YR+PEL+ G T+Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG--TPTREEIRCMNPNYTDFRFP 273
+D+W+ GCV AELL G PL+PG++ VDQL I K LG P +++ N ++ + P
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP 242
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
+ ++ + A+ L L P+ R T + HP+F+ +RE
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 70/297 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G VF+AK ET E VA+K+V D + RE+ L++ + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV----------- 187
S L LV E+ + + K++ S N + VK + +Q+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 188 ---------------KGEANISY-----------------ICSRYYRAPELIFGATEYTT 215
GE ++ + + +YR P+++FGA Y+T
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 216 SIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
SID+WSAGC+ AEL G+PLFPG + DQL I ++LGTPT E+ M + P
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPD 235
Query: 275 IKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
K +P + ++ DL LL+ +P R +A EA HP+F + P
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 64/317 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHC 138
+G G++G+V A+ TG+ VAIKK V+ + + REL++++ H N+I++K
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 139 FFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVK--------- 188
T E + +V++ + +++++ +Q + L +V+ + YQ+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 189 ----------------------GEANIS----------------YICSRYYRAPELIFGA 210
G+ ++ Y+ +R+YRAPEL+
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+ I+ +
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRA 298
Query: 271 ---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 327
P + PW V+ +A+ L R+L++ PS R +A A HPF + +P+
Sbjct: 299 YIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDD 357
Query: 328 RLPNGRPFPPLFNFKQE 344
PF F F +E
Sbjct: 358 EPDCAPPFD--FAFDRE 372
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ A Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 143/295 (48%), Gaps = 64/295 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y +G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVL-------KHYSSMNQRMPLIYVKLYTY 185
+ L + L LV E++ + + ++L + ++ + + L+ Y +
Sbjct: 63 VKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 186 QVK----------------GEANIS-----------------YICSRYYRAPELIFGATE 212
+ GE I+ I + +YRAP+++ G+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPN 266
Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 267 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 238 FTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 257 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 315 AQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 64/295 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y +G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVL-------KHYSSMNQRMPLIYVKLYTY 185
+ L + L LV E++ + + ++L + ++ + + L+ Y +
Sbjct: 63 VKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 186 QVK----------------GEANIS-----------------YICSRYYRAPELIFGATE 212
+ GE I+ + + +YRAP+++ G+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPN 266
Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 267 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 238 FTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 64/295 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y +G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVL-------KHYSSMNQRMPLIYVKLYTY 185
+ L + L LV E++ + + ++L + ++ + + L+ Y +
Sbjct: 63 VKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 186 QVK----------------GEANIS-----------------YICSRYYRAPELIFGATE 212
+ GE I+ + + +YRAP+++ G+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPN 266
Y+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 267 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 238 FTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 271 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 329 AQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 31 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 89
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 270 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 328 AQYHDPDDE-PVADPYDQSFESRDLL 352
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 70/297 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G VF+AK ET E VA+K+V D + RE+ L++ + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV----------- 187
S L LV E+ + + K++ S N + VK + +Q+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 188 ---------------KGEANIS-----------------YICSRYYRAPELIFGATEYTT 215
GE ++ + + +YR P+++FGA Y+T
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 216 SIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
SID+WSAGC+ AEL +PLFPG + DQL I ++LGTPT E+ M + P
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPD 235
Query: 275 IKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
K +P + ++ DL LL+ +P R +A EA HP+F + P
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 22 ELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 80
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 141 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 200
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 261 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 319 AQYHDPDDE-PVADPYDQSFESRDLL 343
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P PF F + L
Sbjct: 309 AQYHDPDDE-PVADPFDQSFESRDLL 333
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 247 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 305 AQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 247 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 305 AQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 23 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 81
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 262 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 320 AQYHDPDDE-PVADPYDQSFESRDLL 344
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 256 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 314 AQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 258 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 316 AQYHDPDDE-PVADPYDQSFESRDLL 340
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 257 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 315 AQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 82
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 263 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 321 AQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 82
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 263 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 321 AQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 253 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 311 AQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 35 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 93
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 213
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 274 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 332 AQYHDPDDE-PVADPYDQSFESRDLL 356
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 23 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 81
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 262 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 320 AQYHDPDDE-PVADPYDQSFESRDLL 344
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 253 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 311 AQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 31 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 89
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 270 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 328 AQYHDPDDE-PVADPYDQSFESRDLL 352
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 257 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 315 AQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 256 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 314 AQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 271 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 329 AQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 257 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 315 AQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 58/327 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKKVLQ--------DRRYKN 118
E +TI + ER VG+G++G V A +TG VA+KK+ + R Y
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-- 81
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPE 159
REL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 160 TMYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYR 202
+Y++L+ ++N+ L + + + Y+ +R+YR
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 201
Query: 203 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 262
APE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 261
Query: 263 MNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
++ NY Q+ + VF P A+DL ++L R TA +A AH +
Sbjct: 262 ISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
Query: 319 FDELREPNARLPNGRPFPPLFNFKQEL 345
F + +P+ P P+ F + L
Sbjct: 320 FAQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER +G+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 256 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 314 AQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 35 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 93
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRA 213
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 274 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 332 AQYHDPDDE-PVADPYDQSFESRDLL 356
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 256 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 314 AQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 9 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 67
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 248 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 306 AQYHDPDDE-PVADPYDQSFESRDLL 330
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 11 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 69
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 189
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 250 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 308 AQYHDPDDE-PVADPYDQSFESRDLL 332
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 253 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 311 AQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 197
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 258 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 316 AQYHDPDDE-PVADPYDQSFESRDLL 340
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 10 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 68
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 188
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 249 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 307 AQYHDPDDE-PVADPYDQSFESRDLL 331
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 247 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 305 AQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 253 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 311 AQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 9 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 67
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 248 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 306 AQYHDPDDE-PVADPYDQSFESRDLL 330
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 258 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 320 DELREPNARLPNGRPF 335
+ +P+ P P+
Sbjct: 316 AQYHDPDDE-PVADPY 330
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 258 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
Query: 320 DELREPNARLPNGRPF 335
+ +P+ P P+
Sbjct: 316 AQYHDPDDE-PVADPY 330
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + ++ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + ++ +R+YRA
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 186
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 247 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 305 AQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + ++ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 55/307 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPN 326
+ +P+
Sbjct: 309 AQYHDPD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 55/307 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPN 326
+ +P+
Sbjct: 309 AQYHDPD 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 56/316 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPF 335
+ +P+ P P+
Sbjct: 309 AQYHDPDDE-PVADPY 323
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 55/307 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPN 326
+ +P+
Sbjct: 309 AQYHDPD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + Y+ +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + + +R+YRA
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRA 210
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 271 SSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 329 AQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNV 132
+Y+ +G G++ V++ K T VA+K++ + RE+ L++ + H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV----- 187
++L + S L LV EY+ + + + L ++ + + VKL+ +Q+
Sbjct: 63 VTLHDIIHTEKS-----LTLVFEYLDKDLKQYLDDCGNI---INMHNVKLFLFQLLRGLA 114
Query: 188 ---------------------KGEANIS-----------------YICSRYYRAPELIFG 209
+GE ++ + + +YR P+++ G
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNY 267
+T+Y+T ID+W GC+ E+ G+PLFPG +QL I ++LGTPT E + N +
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234
Query: 268 TDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 326
+ +P+ +A + H R+ + DL ++LLQ+ R +A +A HPFF L E
Sbjct: 235 KTYNYPKYRAEAL--LSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
Query: 327 ARLPN 331
+LP+
Sbjct: 293 HKLPD 297
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 56/326 (17%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDE---LFL----------------NLVMEYVPET 160
EL+L++ M H NVI L F S +E ++L L ++V
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 161 MYRVLKHYS-----------------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRA 203
+Y++L+ ++N+ L + + + + +R+YRA
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRA 190
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GTP E ++ +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 264 NP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ NY Q+ + VF P A+DL ++L R TA +A AH +F
Sbjct: 251 SSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
Query: 320 DELREPNARLPNGRPFPPLFNFKQEL 345
+ +P+ P P+ F + L
Sbjct: 309 AQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ--- 186
N+I L + F S +E + +VME + + +V++ + L+Y L +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 187 ---------------VKGEANIS------------------YICSRYYRAPELIFGATEY 213
VK +A + Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 --------VKLYTYQVKGEANIS------------------YICSRYYRAPELIFGATEY 213
+K VK +A + Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 141/301 (46%), Gaps = 63/301 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHPNVISLK 136
+G+G+ GIV A VAIKK+ R ++N REL LM++++H N+I L
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 137 HCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ--------- 186
+ F S +E + +VME + + +V++ + L+Y L +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 187 ---------VKGEANIS------------------YICSRYYRAPELIFGATEYTTSIDI 219
VK +A + Y+ +RYYRAPE+I G Y ++DI
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDFRFPQIK 276
WS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y + R P+
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYA 267
Query: 277 AHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
+ + K+F +K +A DL S++L S R + EA HP+ + +P
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
Query: 326 N 326
+
Sbjct: 328 S 328
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 --------VKLYTYQVKGEANIS------------------YICSRYYRAPELIFGATEY 213
+K VK +A + Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 321 ELREP 325
+P
Sbjct: 323 VWYDP 327
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 321 ELREP 325
+P
Sbjct: 323 VWYDP 327
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 321 ELREP 325
+P
Sbjct: 323 VWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 321 ELREP 325
+P
Sbjct: 316 VWYDP 320
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ--- 186
N+I L + F S +E + +VME + + +V++ + L+Y L +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 187 ---------------VKGEANIS------------------YICSRYYRAPELIFGATEY 213
VK +A + Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 321 ELREP 325
+P
Sbjct: 324 VWYDP 328
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 321 ELREP 325
+P
Sbjct: 361 VWYDP 365
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 321 ELREP 325
+P
Sbjct: 323 VWYDP 327
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 321 ELREP 325
+P
Sbjct: 361 VWYDP 365
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 321 ELREP 325
+P
Sbjct: 324 VWYDP 328
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 321 ELREP 325
+P
Sbjct: 323 VWYDP 327
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 263
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 264 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
Query: 320 DELREPN 326
+ +P+
Sbjct: 323 NVWYDPS 329
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 201
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 321 ELREP 325
+P
Sbjct: 322 VWYDP 326
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 321 ELREP 325
+P
Sbjct: 317 VWYDP 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 321 ELREP 325
+P
Sbjct: 317 VWYDP 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 61/305 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+ISL + F + +E + LVME + + +V++ + L+Y
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 271 R-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
R FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 321 ELREP 325
+P
Sbjct: 316 VWYDP 320
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 66/291 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G V++A T ETVAIK++ + + RE+ L++ + H N+I LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISY--- 195
L+L+ EY LK Y N + + +K + YQ+ N +
Sbjct: 102 IHHNHR-----LHLIFEYAEND----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 196 ---------------------------------------------ICSRYYRAPELIFGA 210
I + +YR PE++ G+
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYT 268
Y+TS+DIWS C+ AE+L+ PLFPG++ +DQL +I +VLG P + P++
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
FP+ + +V + E +DL + +L+ P R +A A HP+F
Sbjct: 273 Q-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 68/296 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVISLKHCF 139
+G G++ V++ TG VA+K+V D RE+ LM+ + H N++ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTYQV---------- 187
+ L LV E++ + + + + N + + L VK + +Q+
Sbjct: 73 HTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 188 ----------------KGEANI-----------------SYICSRYYRAPELIFGATEYT 214
+G+ + S + + +YRAP+++ G+ Y+
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDFRF 272
TSIDIWS GC+LAE++ G+PLFPG N +QL I ++GTP + P Y
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN---- 243
Query: 273 PQIKAHP---WHKVF--HKRMPPEA--IDLASRLLQYSPSLRCTALEACAHPFFDE 321
P I+ P +V H + P + +D LLQ +P +R +A +A HP+F E
Sbjct: 244 PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 180 ---------------------VKLYTYQVKGEANISY-----ICSRYYRAPELIFGATEY 213
+K+ + + A S+ + +RYYRAPE+I G Y
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG-Y 204
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 264
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 265 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
Query: 320 DELREPN 326
+ +P+
Sbjct: 324 NVWYDPS 330
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 61/294 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHPNVISLK 136
+G+G+ GIV A VAIKK+ R ++N REL LM+ ++H N+ISL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 137 HCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------------- 179
+ F + +E + LVME + + +V++ + L+Y
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 180 ---------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEYTTSIDI 219
+K+ + + A S Y+ +RYYRAPE+I G Y ++DI
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDFR----- 271
WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P NY + R
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 268
Query: 272 --FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
FP++ P +K +A DL S++L P+ R + +A HP+ +
Sbjct: 269 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANISY-----ICSRYYRAPELIFGATEY 213
+K+ + + A S+ + +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F + P +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 141/306 (46%), Gaps = 63/306 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A G VA+KK+ R ++N REL L++ ++H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL--SRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMP-LIYVKLYTYQ-- 186
N+ISL + F + +E + LVME + + +V+ H ++RM L+Y L +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYLLYQMLCGIKHL 142
Query: 187 ----------------VKGEANIS------------------YICSRYYRAPELIFGATE 212
VK + + Y+ +RYYRAPE+I G
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG- 201
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTD 269
Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E + + P NY +
Sbjct: 202 YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 261
Query: 270 FR--FPQIK--------AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R +P IK P K +A DL S++L P R + EA HP+
Sbjct: 262 NRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
Query: 320 DELREP 325
+P
Sbjct: 322 TVWYDP 327
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 70/310 (22%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV---LQDRRYKN------------RELQL 123
Y +R + +GS+G V A G VAIK+V + D R N RE++L
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVK 181
+ HPN++ L+ F L LV E + + +V+ +QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 182 LYTYQV-----------------------------------------KGEANIS-YICSR 199
+ Y + +AN + Y+ R
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+YRAPEL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP E+
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 260 IRCM-NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 315
+ +P+ D+ + A W V P A+DL +++L+++P R + +A
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALR 316
Query: 316 HPFFDELREP 325
HP+F+ L +P
Sbjct: 317 HPYFESLFDP 326
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 60/305 (19%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV---LQDRRYKN------------RELQL 123
Y +R + +GS+G V A G VAIK+V + D R N RE++L
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 124 MRLMDHPNVISLKHCF--FSTTSKDELFL----------------NLVM--EYVPETMYR 163
+ HPN++ L+ F F + +L+L +V+ +++ MY
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 164 VLK-----HYSSM--------------NQRMPLIYVKLYTYQVKGEANISYICSRYYRAP 204
+L H + + N + + L Y+ R+YRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM- 263
EL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP E++
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFS 262
Query: 264 NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
+P+ D+ + A W V P A+DL +++L+++P R + +A HP+F+
Sbjct: 263 SPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Query: 321 ELREP 325
L +P
Sbjct: 322 SLFDP 326
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 65/307 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A G VA+KK+ R ++N REL L++ ++H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL--SRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMP-LIY--------- 179
N+ISL + F + +E + LVME + + +V+ H ++RM L+Y
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYLLYQMLCGIKHL 140
Query: 180 ---------VKLYTYQVKGEANIS------------------YICSRYYRAPELIFGATE 212
+K VK + + Y+ +RYYRAPE+I G
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG- 199
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTD 269
Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E + + P NY +
Sbjct: 200 YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 259
Query: 270 FRFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSPSLRCTALEACAHPF 318
R P + ++F + P +A DL S++L P R + EA HP+
Sbjct: 260 NR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318
Query: 319 FDELREP 325
+P
Sbjct: 319 ITVWYDP 325
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 207
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 267
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 268 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
Query: 320 DELREPN 326
+ +P+
Sbjct: 327 NVWYDPS 333
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANISY-----ICSRYYRAPELIFGATEY 213
+K+ + + A S+ + +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP ++ + P NY +
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 ---------------------VKLYTYQVKGEANIS-----YICSRYYRAPELIFGATEY 213
+K+ + + A S Y+ +RYYRAPE+I G Y
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 256
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 257 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
Query: 320 DELREPN 326
+ +P+
Sbjct: 316 NVWYDPS 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 142/307 (46%), Gaps = 63/307 (20%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------- 179
N+I L + F S +E + +VME + + +V++ + L+Y
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 ---------------------VKLYTYQVKGEANISY-----ICSRYYRAPELIFGATEY 213
+K+ + + A S+ + +RYYRAPE+I G Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDF 270
++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P Y +
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 271 RFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
R P+ + + K+F +K +A DL S++L S R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 320 DELREPN 326
+ +P+
Sbjct: 322 NVWYDPS 328
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 80/309 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVIS 134
YM + +G G G+VF A + + VAIKK++ Q ++ RE++++R +DH N++
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 135 LKHCFFSTTSK--DELF----LN---LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
+ + S+ D++ LN +V EY+ + VL+ + + + +L+ Y
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE-----HARLFMY 127
Query: 186 QV-KG-----EANISY-----------------------------------------ICS 198
Q+ +G AN+ + + +
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 199 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL---VEIIKVLGTP 255
++YR+P L+ YT +ID+W+AGC+ AE+L G+ LF G + ++Q+ +E I V+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE 247
Query: 256 TREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMPP---EAIDLASRLLQYSPSLRCTA 310
R+E+ + P Y D P HK + +P EA+D ++L +SP R TA
Sbjct: 248 DRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 311 LEACAHPFF 319
EA +HP+
Sbjct: 301 EEALSHPYM 309
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 128/293 (43%), Gaps = 57/293 (19%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-NRELQLMR-LMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K RE++++ L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPET-----------------MYRVLK---HYSSM---- 171
S+ LV E+V T MY +LK + SM
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 172 -------------NQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSID 218
++++ LI L + G+ + SRY++ PEL+ Y S+D
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 219 IWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQ 274
+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y D RF
Sbjct: 215 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFND 271
Query: 275 I----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 85/327 (25%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G GSFG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQV--------------------------KGEANI----------------SYICSRYYR 202
+ + +G + I + I SR+YR
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR 266
Query: 203 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI-- 260
APE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P+++ +
Sbjct: 267 APEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325
Query: 261 --RCMN-------PNYTDF---------------RFPQIKAHP----WHKVFHKRMPPEA 292
R N P Y R +++ P W P
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 293 IDLASRLLQYSPSLRCTALEACAHPFF 319
+D + L++ P++R T +A HP+
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 85/327 (25%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G GSFG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQV--------------------------KGEANI----------------SYICSRYYR 202
+ + +G + I + I SR+YR
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR 266
Query: 203 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI-- 260
APE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P+++ +
Sbjct: 267 APEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325
Query: 261 --RCMN-------PNYTDF---------------RFPQIKAHP----WHKVFHKRMPPEA 292
R N P Y R +++ P W P
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 293 IDLASRLLQYSPSLRCTALEACAHPFF 319
+D + L++ P++R T +A HP+
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 197 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 255
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 256 QLVKIAKVLGTDG------LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 309
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 310 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 343
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 177 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 236 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 289
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 176 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 235 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 288
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 176 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 235 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 288
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 21/143 (14%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 254
+ SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 255 PTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLL 300
+N +R PQ++A PW K + + PEAID +LL
Sbjct: 246 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 301 QYSPSLRCTALEACAHPFFDELR 323
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 176 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 235 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 288
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 177 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 236 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 289
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 178 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 236
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 237 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 290
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 291 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 176 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 235 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 288
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ +Y S+D+WS GC+ A ++ +P F G + D
Sbjct: 176 YHPGKEYNVR-VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRF---PQIKA-------HPWHKVFHKR----MP 289
QLV+I KVLGT +N +R PQ++A PW K + +
Sbjct: 235 QLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS 288
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
PEAID +LL+Y R TALEA HP+F ++R
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 83/331 (25%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMRLMD---HPNVISL-KHCFFSTTSKDELFLNLVMEYV-----------PE------- 159
++R ++ HPNV+ L C S T + E L LV E+V PE
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 160 ---TMYRVLK-----------HYSSMNQRMPLI-----------YVKLYTYQVKGEANIS 194
M+++L+ H Q + + ++Y++Q+ A S
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTS 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 254
+ + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 179 VVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 255 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQYS 303
P E+ +P+ A P + FH + P E DL + L ++
Sbjct: 238 PGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 304 PSLRCTALEACAHPFFDELREPNARLPNGRP 334
P+ R +A A +HP+F +L L + P
Sbjct: 285 PAKRISAYSALSHPYFQDLERCKENLDSHLP 315
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 83/319 (26%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMRLMD---HPNVISL-KHCFFSTTSKDELFLNLVMEYV-------------------- 157
++R ++ HPNV+ L C S T + E L LV E+V
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 158 -PETMYRVLKHYSSMNQRMPL--------IYV--------------KLYTYQVKGEANIS 194
+ M+++L+ ++ + I V ++Y++Q+ A S
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTS 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 254
+ + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 179 VVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 255 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQYS 303
P E+ +P+ A P + FH + P E DL + L ++
Sbjct: 238 PGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 304 PSLRCTALEACAHPFFDEL 322
P+ R +A A +HP+F +L
Sbjct: 285 PAKRISAYSALSHPYFQDL 303
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 139/327 (42%), Gaps = 85/327 (25%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G G FG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQV--------------------------KGEANISYI-----C-----------SRYYR 202
+ + +G + I I C SR+YR
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR 266
Query: 203 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI-- 260
APE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P ++ +
Sbjct: 267 APEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDA 325
Query: 261 --RCMN-------PNYTDF---------------RFPQIKAHP----WHKVFHKRMPPEA 292
R N P Y R +++ P W P
Sbjct: 326 SKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLF 385
Query: 293 IDLASRLLQYSPSLRCTALEACAHPFF 319
+D + L++ P++R T +A HP+
Sbjct: 386 LDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P F G++ D
Sbjct: 188 YHPAQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYD 246
Query: 244 QLVEIIKVLGTPTREEIRC--------MNPNYTDFRFPQIKAHPWHKVFHKR----MPPE 291
QLV I KVLGT EE+ ++P++ D Q W H + PE
Sbjct: 247 QLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPE 302
Query: 292 AIDLASRLLQYSPSLRCTALEACAHPFF 319
A+DL +LL+Y R TA EA HP+F
Sbjct: 303 ALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P F G++ D
Sbjct: 183 YHPAQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYD 241
Query: 244 QLVEIIKVLGTPTREEIRC--------MNPNYTDFRFPQIKAHPWHKVFHKR----MPPE 291
QLV I KVLGT EE+ ++P++ D Q W H + PE
Sbjct: 242 QLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHLVSPE 297
Query: 292 AIDLASRLLQYSPSLRCTALEACAHPFF 319
A+DL +LL+Y R TA EA HP+F
Sbjct: 298 ALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 117 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 176
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 177 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 236
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 237 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 293
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 294 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 339
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 231 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 287
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 161 MYRVLKHYSSM----NQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTS 216
M+R +K ++ M ++++ LI L + G+ + SRY++ PEL+ Y S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 217 IDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRF 272
+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y D RF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRF 269
Query: 273 PQIKAHP----WHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
I W + H + PEA+D +LL+Y R TA EA HP+F + +
Sbjct: 270 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
Query: 325 PNARL 329
AR+
Sbjct: 330 DQARM 334
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQI----KAHPWHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+ PEA+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 83/316 (26%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMRLMD---HPNVISL-KHCFFSTTSKDELFLNLVMEYV-----------PE------- 159
++R ++ HPNV+ L C S T + E L LV E+V PE
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 160 ---TMYRVLKHYSSMNQRMPL--------IYV--------------KLYTYQVKGEANIS 194
M+++L+ ++ + I V ++Y++Q+ A S
Sbjct: 122 IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTS 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 254
+ + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 179 VVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 255 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQYS 303
P E+ +P+ A P + FH + P E DL + L ++
Sbjct: 238 PGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 304 PSLRCTALEACAHPFF 319
P+ R +A A +HP+F
Sbjct: 285 PAKRISAYSALSHPYF 300
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 243
Y E N+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P F G + D
Sbjct: 182 YHPGQEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 240
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR----MPPEA 292
QLV I KVLGT E++ Y D RF I W + H + PEA
Sbjct: 241 QLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEA 297
Query: 293 IDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
+D +LL+Y R TA EA HP+F + + AR+
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 328
+ PEA+D +LL+Y R TA EA HP+F + + AR
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQAR 333
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ PEA+D +LL+Y R TA EA HP+F
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 232 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ PEA+D +LL+Y R TA EA HP+F
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 169
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 170 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 230 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 286
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ PEA+D +LL+Y R TA EA HP+F
Sbjct: 287 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 126 LMDHPNVISLKHCFFSTTSKD------ELFLNLVMEYVPETMYRVLKHYSSM----NQRM 175
+ +H N K + + T D E+ L + M+R +K ++ M ++++
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170
Query: 176 PLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQP 234
LI L + G+ + SRY++ PEL+ Y S+D+WS GC+LA ++ +P
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 235 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT---DFRFPQIKAHP----WHKVFHKR 287
F G + DQLV I KVLGT E++ Y D RF I W + H
Sbjct: 231 FFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 287
Query: 288 ----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ PEA+D +LL+Y R TA EA HP+F
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-----------LGQPLFPGENAV- 242
++ +R+YRAPELI YT +ID+WS GC+ AELL PLFPG +
Sbjct: 243 HVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFP 302
Query: 243 -------------------DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKV 283
DQL I +LGTP+ E+I + R+ +I
Sbjct: 303 LSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK-RYIRIFPKREGTD 361
Query: 284 FHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR----EPNARLPNGRPFP 336
+R P +AI L R+L ++P+ R T E AHPFF E+R E NA PF
Sbjct: 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFN 421
Query: 337 PLFNFKQ-ELAGASPELINRLIPE 359
N + +L A + I R PE
Sbjct: 422 DWMNMDEPQLRYAFVKEIQRYHPE 445
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNV 132
Y ++GTGS+G V +A VAIKK+L+ D + RE+ ++ ++H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 133 ISL 135
+ +
Sbjct: 115 VKV 117
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 34/165 (20%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-----------PLFPGENAV 242
S++ +R+YRAPELI YT SIDIWS GC+ AELL PLFPG +
Sbjct: 215 SHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCF 274
Query: 243 -----------------DQLVEIIKVLGTPTREEIRCMNPN----YTDFRFPQIKAHPWH 281
DQL I V+GTP E+++C+ Y FP
Sbjct: 275 PLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKL-FPTRDGIDLS 333
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 326
K + + E IDL +L+++ R T +A +HP+ ++R+ N
Sbjct: 334 KKY-SSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPN 131
+Y + ++G GS+G V+ A + VAIKKV L D + RE+ ++ +
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 132 VISLKHCFF--STTSKDELFLNLVMEYVPETMYRVLK 166
+I L DEL+ +V+E + ++ K
Sbjct: 89 IIRLHDLIIPEDLLKFDELY--IVLEIADSDLKKLFK 123
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 38/165 (23%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQ----------PLFPGENAV 242
S++ +R+YRAPELI YT SIDIWS GC+ AELL + Q PLFPG +
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCF 269
Query: 243 -----------------DQLVEIIKVLGTPTREEIRCMN-PNYTDFRFPQIKAHPWHKVF 284
DQL I ++GTPT ++++ +N P + IK P K
Sbjct: 270 PLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY----IKLFPHRKPI 325
Query: 285 HKR-----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
+ + + + I+L +L+++P+ R T +A HP+ ++R+
Sbjct: 326 NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV 110
+Y+ + ++G GS+G V+ A T + VAIKKV
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV 59
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 58/292 (19%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS-----KDELFL--------------NLVMEYVPETMYRVLKH------------ 167
+ S K ++L N+++++ + RV++
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 168 --YSSMNQRMPLI----YVKLYTYQVKGEANISY----------ICSRYYRAPELIFGAT 211
+ M LI +KL + + +++ + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 271
+Y ID+W AGC++AE+ P+ G QL I ++ G+ T E ++ NY +
Sbjct: 206 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELYE 264
Query: 272 FPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLRCTALEACAHPFF 319
++ KV + P A+DL +LL P+ R + +A H FF
Sbjct: 265 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS-----KDELFL--------------NLVMEYVPETMYRVLKH------------ 167
+ S K ++L N+++++ + RV++
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 168 --YSSMNQRMPLI----YVKLYTYQVKGEANISY----------ICSRYYRAPELIFGAT 211
+ M LI +KL + + +++ + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF- 270
+Y ID+W AGC++AE+ P+ G QL I ++ G+ T E + PN ++
Sbjct: 206 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE----VWPNVDNYE 261
Query: 271 ---RFPQIKAHPWHKVFHKRMP-----PEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ +K + R+ P A+DL +LL P+ R + +A H FF
Sbjct: 262 LYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 120/294 (40%), Gaps = 82/294 (27%)
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY--SSMNQR-- 174
RE+ L+R + HPNVISL+ F S + + L+ +Y ++ ++K + S N++
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 175 -MPLIYVKLYTYQV------------------------------KGEANIS--------- 194
+P VK YQ+ +G I+
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 195 -----------YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV- 242
+ + +YRAPEL+ GA YT +IDIW+ GC+ AELL +P+F
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 243
Query: 243 --------DQLVEIIKVLGTPTR---EEIRCMNPNYT---DFR------FPQIKAHPWHK 282
DQL I V+G P E+I+ M + T DFR IK HK
Sbjct: 244 KTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK 303
Query: 283 VFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFP 336
V + +A L +LL P R T+ +A P+F E P + + G P
Sbjct: 304 V---KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIP 354
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 139 FFSTTS-----KDELFL--------------NLVMEYVPETMYRVLKH------------ 167
+ S K ++L N+++++ + RV++
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144
Query: 168 --YSSMNQRMPLI----YVKLYTYQVKGEANISY----------ICSRYYRAPELIFGAT 211
+ M LI +KL + + +++ + + +YR PEL+ G
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 204
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF- 270
+Y ID+W AGC++AE+ P+ G QL I ++ G+ T E + PN ++
Sbjct: 205 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE----VWPNVDNYE 260
Query: 271 ---RFPQIKAHPWHKVFHKRMP-----PEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ +K + R+ P A+DL +LL P+ R + +A H FF
Sbjct: 261 LYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 68/297 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS-----KDELFL--------------NLVMEYVPETMYRVLKH------------ 167
+ S K ++L N+++++ + RV++
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 168 --YSSMNQRMPLI----YVKLYTYQVKGEANISY----------ICSRYYRAPELIFGAT 211
+ M LI +KL + + +++ + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF- 270
+Y ID+W AGC++AE+ P+ G QL I ++ G+ T E + PN ++
Sbjct: 206 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE----VWPNVDNYE 261
Query: 271 ---RFPQIKAHPWHKVFHKRMP-----PEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ +K + R+ P A+DL +LL P+ R + +A H FF
Sbjct: 262 LYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 58/238 (24%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYS----SMN--- 172
LM+ + ++ LK F L LV E + +Y +L++ + S+N
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 141
Query: 173 ---QRMPLIYVKLYTYQVK--------------------------------GEANISYIC 197
Q+M + L T ++ G+ I
Sbjct: 142 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ 201
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 255
SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 202 SRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 58/238 (24%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYS----SMN--- 172
LM+ + ++ LK F L LV E + +Y +L++ + S+N
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 173 ---QRMPLIYVKLYTYQVK--------------------------------GEANISYIC 197
Q+M + L T ++ G+ I
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ 220
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 255
SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 221 SRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 58/238 (24%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYS----SMN--- 172
LM+ + ++ LK F L LV E + +Y +L++ + S+N
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 173 ---QRMPLIYVKLYTYQVK--------------------------------GEANISYIC 197
Q+M + L T ++ G+ I
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQ 220
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 255
SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG P
Sbjct: 221 SRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 75/287 (26%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 131 NVISLKHCFFSTT----------SKDELFLNLVME----------------------YVP 158
N++ L + FF + ELF ++ +
Sbjct: 111 NIMKL-YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 159 ETMYRVLK------HYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATE 212
+ ++R LK S + + +I L T+ + I + YY APE++ G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-- 227
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
Y D+WS G +L LL G P F G N D L ++ K YT F
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FEL 272
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 273 PQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 75/287 (26%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 131 NVISLKHCFFSTT----------SKDELFLNLVME----------------------YVP 158
N++ L + FF + ELF ++ +
Sbjct: 110 NIMKL-YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 159 ETMYRVLK------HYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATE 212
+ ++R LK S + + +I L T+ + I + YY APE++ G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-- 226
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
Y D+WS G +L LL G P F G N D L ++ K YT F
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FEL 271
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 272 PQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 66/291 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYV-----------------PETMYRVLKHY------ 168
V+ L ++ + E+ + LV E+V ET+ +++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 169 --------------------SSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIF 208
+ ++Y+YQ+ A + + +YRAPE++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALFPVVVTLWYRAPEVLL 184
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSLP 242
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
FP P V M L +L ++P R +A A H +
Sbjct: 243 RGAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 75/287 (26%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 131 NVISLKHCFFSTT----------SKDELFLNLVME----------------------YVP 158
N++ L + FF + ELF ++ +
Sbjct: 87 NIMKL-YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 159 ETMYRVLK------HYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATE 212
+ ++R LK S + + +I L T+ + I + YY APE++ G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-- 203
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
Y D+WS G +L LL G P F G N D L ++ K YT F
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FEL 248
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 249 PQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 66/291 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYV-----------------PETMYRVLKHY------ 168
V+ L ++ + E+ + LV E+V ET+ +++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 169 --------------------SSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIF 208
+ ++Y+YQ+ A + + +YRAPE++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALAPVVVTLWYRAPEVLL 184
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSLP 242
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
FP P V M L +L ++P R +A A H +
Sbjct: 243 RGAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 66/291 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYV-----------------PETMYRVLKHY------ 168
V+ L ++ + E+ + LV E+V ET+ +++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 169 --------------------SSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIF 208
+ ++Y+YQ+ A + + +YRAPE++
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALDPVVVTLWYRAPEVLL 184
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 185 QST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSLP 242
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
FP P V + M L +L ++P R +A A H +
Sbjct: 243 RGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 69/294 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------------RELQLMRLMD--- 128
+G G++G V++A+ +G VA+K V R N RE+ L+R ++
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 129 HPNVISLKHCFFSTTSKDELFLNLVMEYV-----------------PETMYRVLKHY--- 168
HPNV+ L ++ + E+ + LV E+V ET+ +++ +
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 169 -----------------------SSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPE 205
+ ++Y+YQ+ A + + +YRAPE
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPE 189
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ +
Sbjct: 190 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDV 247
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ FP P V + M L +L ++P R +A A H +
Sbjct: 248 SLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 118/285 (41%), Gaps = 73/285 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 131 NVISL------KHCFF---STTSKDELFLNLVME----------------------YVPE 159
N++ L K F+ + ELF ++ + +
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 160 TMYRVLK------HYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEY 213
++R LK S + + +I L T+ + I + YY APE++ G Y
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--Y 210
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
D+WS G +L LL G P F G N D L ++ K YT F P
Sbjct: 211 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 255
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
Q W KV A DL ++L Y PS+R +A +A H +
Sbjct: 256 Q-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 115/286 (40%), Gaps = 75/286 (26%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 131 NVISLKHCFFSTT----------SKDELFLNLVME----------------------YVP 158
N+ L + FF + ELF ++ +
Sbjct: 87 NIXKL-YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 159 ETMYRVLK------HYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATE 212
+ ++R LK S + + +I L T+ + I + YY APE++ G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-- 203
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
Y D+WS G +L LL G P F G N D L ++ K YT F
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FEL 248
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
PQ W KV A DL + L Y PS R +A +A H +
Sbjct: 249 PQ-----WKKV-----SESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 121/299 (40%), Gaps = 75/299 (25%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 137 HCFFSTTS---------KDELFLNLVME--YVPETMYRVLK---------HYSSMNQR-- 174
++S ELF ++ + R++K H ++ R
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 175 ---------------MPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDI 219
+ +I L T + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP 279
WSAG +L LL G P F G+N D I+K R Y F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-FDLPQ----- 245
Query: 280 WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPL 338
W + +A DL ++L + PSLR TA + HP+ +++ ++ P P L
Sbjct: 246 WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETPTISDLPSL 296
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 140/357 (39%), Gaps = 93/357 (26%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---KNRELQLM-RL 126
GEP + Y+ R +G G F V+ AK + VA+K V D+ Y E++L+ R+
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 127 MDHPNV----ISLKHCF-----FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
D N + H F+ + + + +V E + E + ++K Y ++ +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 178 IYVKLYTYQ------------------VKGE------------------ANISYIC---- 197
IYVK + Q +K E A++ C
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 198 -------SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV-----DQ 244
+R YR+PE++ GA + DIWS C++ EL+ G LF P E D
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 245 LVEIIKVLGTPTREEIRCMNPNYTDFRF---------PQIKAHPWHKV------FHKRMP 289
+ +II++LG +R N YT F ++K P V F K
Sbjct: 250 IAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFF------DELREPNARL-PNGRPFPPLF 339
E D S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 140/357 (39%), Gaps = 93/357 (26%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---KNRELQLM-RL 126
GEP + Y+ R +G G F V+ AK + VA+K V D+ Y E++L+ R+
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 127 MDHPNV----ISLKHCF-----FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
D N + H F+ + + + +V E + E + ++K Y ++ +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 178 IYVKLYTYQ------------------VKGE------------------ANISYIC---- 197
IYVK + Q +K E A++ C
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 198 -------SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV-----DQ 244
+R YR+PE++ GA + DIWS C++ EL+ G LF P E D
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 245 LVEIIKVLGTPTREEIRCMNPNYTDFRF---------PQIKAHPWHKV------FHKRMP 289
+ +II++LG +R N YT F ++K P V F K
Sbjct: 250 IAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 290 PEAIDLASRLLQYSPSLRCTALEACAHPFF------DELREPNARL-PNGRPFPPLF 339
E D S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 24/154 (15%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + +R+YRAPE+I A ++ D+WS GC+L E LG +FP ++ + L +
Sbjct: 189 EHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 250 KVLGTPTREEI------RCMNPNYTDF-------RFPQIKAHPW------HKVFHKRMPP 290
++LG + I + + + D+ R+ P V H+R+
Sbjct: 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL-- 305
Query: 291 EAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
DL ++L+Y P+ R T EA HPFFD L++
Sbjct: 306 --FDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 114/279 (40%), Gaps = 72/279 (25%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 137 HCFFSTTS---------KDELFLNLVME--YVPETMYRVLK---------HYSSMNQR-- 174
++S ELF ++ + R++K H ++ R
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 175 ---------------MPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDI 219
+ +I L T + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP 279
WSAG +L LL G P F G+N D I+K R Y F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-FDLPQ----- 245
Query: 280 WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
W + + +A DL ++L + PSLR TA + HP+
Sbjct: 246 W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 114/279 (40%), Gaps = 72/279 (25%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 137 HCFFSTTS---------KDELFLNLVME--YVPETMYRVLK---------HYSSMNQR-- 174
++S ELF ++ + R++K H ++ R
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 175 ---------------MPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTTSIDI 219
+ +I L T + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP 279
WSAG +L LL G P F G+N D I+K R Y F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-FDLPQ----- 245
Query: 280 WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
W + + +A DL ++L + PSLR TA + HP+
Sbjct: 246 W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + R+YRAPE+I A ++ D+WS GC+L E LG +FP ++ + L +
Sbjct: 189 EHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 250 KVLGTPTREEI------RCMNPNYTDF-------RFPQIKAHPW------HKVFHKRMPP 290
++LG + I + + + D+ R+ P V H+R+
Sbjct: 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL-- 305
Query: 291 EAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
DL ++L+Y P+ R T EA HPFFD L++
Sbjct: 306 --FDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK-- 136
+G G+F +V + + G+ A K + +D + RE ++ RL+ HPN++ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 137 -------HCFFSTTSKDELFLNLVM-EYVPET--------MYRVLKHYSSMN-------- 172
+ F + ELF ++V EY E + + H M
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 173 ------QRMPLIYVKLYTY----QVKGE--ANISYICSRYYRAPELIFGATEYTTSIDIW 220
++ VKL + +V+GE A + + Y +PE + Y +D+W
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDLW 208
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
+ G +L LL+G P F E+ +L + IK DF P+ W
Sbjct: 209 ACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------------GAYDFPSPE-----W 248
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPL-- 338
V PEA DL +++L +PS R TA EA HP+ + + L
Sbjct: 249 DTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKK 303
Query: 339 FNFKQELAGA 348
FN +++L GA
Sbjct: 304 FNARRKLKGA 313
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + +R+YRAPE+I ++ D+WS GC++ E +G LF + + L +
Sbjct: 208 EHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMME 266
Query: 250 KVLGTPTREEIRC-------------MNPNYTDFRFPQIKAHPWHKVFHKRMPP--EAID 294
++LG IR + N + R+ + P + + D
Sbjct: 267 RILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFD 326
Query: 295 LASRLLQYSPSLRCTALEACAHPFFDELR-EPNARL 329
L +L+Y P+ R T EA HPFF LR EP +L
Sbjct: 327 LIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKL 362
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 69/252 (27%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKN---RELQLMRLMDHP 130
++ E+ +G G F V++A CL G VA+KKV L D + + +E+ L++ ++HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQV-- 187
NVI F LN+V+E + R++KH+ + +P V Y Q+
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 188 -----------------------------------------KGEANISYICSRYYRAPEL 206
K A S + + YY +PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 207 IFGATEYTTSIDIWSAGCVLAEL-LLGQPLFPGENAVDQLVEIIKVLGTP------TREE 259
I Y DIWS GC+L E+ L P + + + L + I+ P EE
Sbjct: 208 IH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 260 IR-----CMNPN 266
+R C+NP+
Sbjct: 267 LRQLVNMCINPD 278
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 70/296 (23%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNRELQ 122
G G+ Q Y E +G GS+G V A T A KK+ ++D +E++
Sbjct: 18 GSTKGDINQY--YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 123 LMRLMDHPNVISLKHCFFSTT---------SKDELFLNLVMEYV--PETMYRVLK----- 166
+M+ +DHPN+I L F T + ELF +V + V R++K
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 167 ----HYSSMNQR-----------------MPLIYVKLYTYQVKGEANISYICSRYYRAPE 205
H ++ R + LI L G+ + + + YY +P+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
++ G Y D WSAG ++ LL G P F + +++I + GT
Sbjct: 196 VLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT----------- 240
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
F FP+ W V P+A L RLL SP R T+L+A H +F++
Sbjct: 241 ----FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 70/296 (23%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNRELQ 122
G G+ Q Y E +G GS+G V A T A KK+ ++D +E++
Sbjct: 1 GSTKGDINQY--YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 58
Query: 123 LMRLMDHPNVISLKHCFFSTT---------SKDELFLNLVMEYV--PETMYRVLK----- 166
+M+ +DHPN+I L F T + ELF +V + V R++K
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 167 ----HYSSMNQR-----------------MPLIYVKLYTYQVKGEANISYICSRYYRAPE 205
H ++ R + LI L G+ + + + YY +P+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
++ G Y D WSAG ++ LL G P F + +++I + GT
Sbjct: 179 VLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT----------- 223
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
F FP+ W V P+A L RLL SP R T+L+A H +F++
Sbjct: 224 ----FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F +T + L++EY P T+YR L+ S +++ Y+ K
Sbjct: 74 YGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F D I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 72/319 (22%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + + TG+ A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVM-EYVPET------------------- 160
PN++ L + F + ELF ++V EY E
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 161 --MYRVLKHYSSM-NQRMPLIYVKLYTY----QVKGE--ANISYICSRYYRAPELIFGAT 211
++R LK + + + VKL + +V+G+ A + + Y +PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRKD 181
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 271
Y +D+W+ G +L LL+G P F E+ +L + IK DF
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------------GAYDFP 226
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN 331
P+ W V PEA DL +++L +P+ R TA EA HP+ + + +
Sbjct: 227 SPE-----WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHR 276
Query: 332 GRPFPPL--FNFKQELAGA 348
L FN +++L GA
Sbjct: 277 QETVDCLKKFNARRKLKGA 295
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + +R+YR PE+I + D+WS GC+L E G LF + LV +
Sbjct: 226 EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
Query: 250 KVLG-------TPTREEIR------CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI--- 293
K+LG TR++ + N +D R+ + P K + + E +
Sbjct: 285 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLF 343
Query: 294 DLASRLLQYSPSLRCTALEACAHPFF 319
DL R+L++ P+ R T EA HPFF
Sbjct: 344 DLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 72/319 (22%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + + TG+ A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVM-EYVPET------------------- 160
PN++ L + F + ELF ++V EY E
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 161 --MYRVLKHYSSM-NQRMPLIYVKLYTY----QVKG--EANISYICSRYYRAPELIFGAT 211
++R LK + + + VKL + +V+G +A + + Y +PE +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRKD 181
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 271
Y +D+W+ G +L LL+G P F E+ +L + IK DF
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------------GAYDFP 226
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN 331
P+ W V PEA DL +++L +P+ R TA EA HP+ + + +
Sbjct: 227 SPE-----WDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHR 276
Query: 332 GRPFPPL--FNFKQELAGA 348
L FN +++L GA
Sbjct: 277 QETVDCLKKFNARRKLKGA 295
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 124/310 (40%), Gaps = 72/310 (23%)
Query: 85 VGTGSFGIVFQ-AKCLETGETVAI-----KKVLQDRRYKNRELQLMRLMDHPNVISLK-- 136
+G G+F +V + K L E A+ K +D + RE ++ RL+ HPN++ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 137 -------HCFFSTTSKDELFLNLVM-EYVPET--------MYRVLKHYSSMN-------- 172
+ F + ELF ++V EY E + + H M
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKP 138
Query: 173 ------QRMPLIYVKLYTY----QVKGE--ANISYICSRYYRAPELIFGATEYTTSIDIW 220
++ VKL + +V+GE A + + Y +PE + Y +D+W
Sbjct: 139 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDLW 197
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
+ G +L LL+G P F E+ +L + IK DF P+ W
Sbjct: 198 ACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------------GAYDFPSPE-----W 237
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPL-- 338
V PEA DL +++L +PS R TA EA HP+ + + L
Sbjct: 238 DTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKK 292
Query: 339 FNFKQELAGA 348
FN +++L GA
Sbjct: 293 FNARRKLKGA 302
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 182 LYTYQVKGE------------ANISYIC----SRY--------YRAPELIFGATEYTTSI 217
+ +K E A+ + C SR Y PE+I G + +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRM-HDEKV 188
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 229
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 230 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + +R+YR PE+I + D+WS GC+L E G LF + LV +
Sbjct: 203 EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
Query: 250 KVLG-------TPTREEIR------CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI--- 293
K+LG TR++ + N +D R+ + P K + + E +
Sbjct: 262 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLF 320
Query: 294 DLASRLLQYSPSLRCTALEACAHPFF 319
DL R+L++ P+ R T EA HPFF
Sbjct: 321 DLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 190 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E + + + +R+YR PE+I + D+WS GC+L E G LF + LV +
Sbjct: 194 EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 250 KVLG-------TPTREEIR------CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI--- 293
K+LG TR++ + N +D R+ + P K + + E +
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLF 311
Query: 294 DLASRLLQYSPSLRCTALEACAHPFF 319
DL R+L++ P+ R T EA HPFF
Sbjct: 312 DLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ VA+K + + + K RE+++ + HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRM----------PLIYV---K 181
+ F+ D + L++EY P +Y+ L+ + +++ L+Y K
Sbjct: 89 YNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 182 LYTYQVKGE------------ANISY-----------ICSRY-YRAPELIFGATEYTTSI 217
+ +K E A+ + +C Y PE+I G + +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRM-HNEKV 202
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+W G + ELL+G P F + + I+KV D +FP
Sbjct: 203 DLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-----------------DLKFPA--- 242
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+P A DL S+LL+++PS R + AHP+
Sbjct: 243 ---------SVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 116/300 (38%), Gaps = 86/300 (28%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------- 119
GK GE SY R +G+G++G V K AIK + + + K R
Sbjct: 32 GKIGE-----SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 120 ---------ELQLMRLMDHPNVISL------KHCFFSTTS---KDELFLNLVMEY----- 156
E+ L++ +DHPN+I L K F+ T ELF ++ +
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 157 -VPETMYRVL-------KHYSS----------MNQRMPLIYVKLYTYQVKGEANISY--- 195
M ++L KH + + L+ +K+ + + + Y
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 196 --ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
+ + YY APE++ +Y D+WS G ++ LL G P F G+N D + ++ K
Sbjct: 207 DRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK--- 261
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
Y DF + W K + EA +L +L Y + RCTA EA
Sbjct: 262 ----------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEEA 299
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 110/282 (39%), Gaps = 80/282 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 213
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 254
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A DL SRLL+++PS R E HP+
Sbjct: 255 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVKGE------------ANISY-----------ICSRY-YRAPELIFGATEYTTSI 217
+ +K E AN + +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 182 LYTYQVKGE------------ANISY-----------ICSRY-YRAPELIFGATEYTTSI 217
+ +K E AN + +C Y PE+I G + +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 189
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 230
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 231 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 27 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 82
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 83 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 137
Query: 173 QRMPLIY---------------------VKLYTY----QVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 138 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 197
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 198 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 241
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 242 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 290
Query: 326 NARLP 330
+ +P
Sbjct: 291 ASIVP 295
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 70 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 125
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 126 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 180
Query: 173 QRMPLIY---------------------VKLYTY----QVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 181 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 240
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 241 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 284
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 285 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333
Query: 326 NARLP 330
+ +P
Sbjct: 334 ASIVP 338
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 75
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 76 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 130
Query: 173 QRMPLIY---------------------VKL----YTYQVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 131 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 190
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 191 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 234
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 235 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 283
Query: 326 NARLP 330
+ +P
Sbjct: 284 ASIVP 288
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 71
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 72 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 126
Query: 173 QRMPLIY---------------------VKL----YTYQVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 127 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 186
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 187 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 230
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 231 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279
Query: 326 NARLP 330
+ +P
Sbjct: 280 ASIVP 284
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 147 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 202
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 203 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 257
Query: 173 QRMPLIY---------------------VKLYTY----QVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 258 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 317
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 318 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 361
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 362 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410
Query: 326 NARLP 330
+ +P
Sbjct: 411 ASIVP 415
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 110/282 (39%), Gaps = 80/282 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKV 213
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 254
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A DL SRLL+++PS R E HP+
Sbjct: 255 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 110/282 (39%), Gaps = 80/282 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 204
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 245
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A DL SRLL+++PS R E HP+
Sbjct: 246 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 81/305 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 25 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 80
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------ 172
R H NV+ + + + DEL+ +VME++ + ++ MN
Sbjct: 81 RDYQHENVVEMYNSYLVG---DELW--VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVL 135
Query: 173 QRMPLIY---------------------VKLYTY----QVKGEA--NISYICSRYYRAPE 205
Q + +++ VKL + QV E + + Y+ APE
Sbjct: 136 QALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 195
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
LI Y +DIWS G ++ E++ G+P + E P + ++ +
Sbjct: 196 LI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRD 239
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
N P K HK + P RLL P+ R TA E HPF + P
Sbjct: 240 NLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 288
Query: 326 NARLP 330
+ +P
Sbjct: 289 ASIVP 293
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 192
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 233
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 234 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 191
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 232
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 233 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKV 189
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 230
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 231 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKV 188
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 229
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 230 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 186
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 227
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 228 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKV 190
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 231
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 232 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKV 192
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 233
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 234 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKV 188
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 229
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 230 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 191
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G P F + I +V +F FP
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF-- 232
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++ S R T E HP+
Sbjct: 233 ----------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 131/320 (40%), Gaps = 74/320 (23%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + L TG A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVM-EYVPET-----MYRVLKHYSSMNQR 174
N++ L + F + ELF ++V EY E + ++L+ +Q
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 121
Query: 175 MPLIY------------------VKLYTY----QVKG--EANISYICSRYYRAPELIFGA 210
M +++ VKL + +V+G +A + + Y +PE +
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRK 180
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
Y +DIW+ G +L LL+G P F E+ +L + IK DF
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA--------------GAYDF 225
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 330
P+ W V PEA +L +++L +P+ R TA EA HP+ + + +
Sbjct: 226 PSPE-----WDTV-----TPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMH 275
Query: 331 NGRPFPPL--FNFKQELAGA 348
L FN +++L GA
Sbjct: 276 RQETVECLKKFNARRKLKGA 295
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 182 LYTYQVK---------GEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I+ +C Y PE+I G + +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKV 191
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G P F + I +V +F FP
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF-- 232
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++ S R T E HP+
Sbjct: 233 ----------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKV 187
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 228
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 229 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE I G + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRX-HDEKV 192
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 233
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 234 ----------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P T+YR L+ S +++ Y+ +
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 184
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 225
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 226 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 76/321 (23%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKV-LQDRRYKNRELQLMRLM 127
T Y +G G+F +V +C++ + + KK+ +D + RE ++ RL+
Sbjct: 30 TDDYQLFEELGKGAFSVV--RRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 128 DHPNVISLK---------HCFFSTTSKDELFLNLVM-EYVPET-----MYRVLKHYSSMN 172
HPN++ L + F + ELF ++V EY E ++++L+ + ++
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 173 Q-----------------RMPLIYVKLYTY----QVKGE--ANISYICSRYYRAPELIFG 209
Q + VKL + +V+GE A + + Y +PE +
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE-VLR 206
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 269
Y +DIW+ G +L LL+G P F E+ +L + IK D
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA--------------GAYD 251
Query: 270 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 329
F P+ W V PEA +L +++L +P+ R TA +A HP+ + + +
Sbjct: 252 FPSPE-----WDTV-----TPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMM 301
Query: 330 PNGRPFPPL--FNFKQELAGA 348
L FN +++L GA
Sbjct: 302 HRQETVECLRKFNARRKLKGA 322
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 50/213 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ + HPN I
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ--------- 186
+ C+ E LVMEY + +L+ + Q + + V Q
Sbjct: 120 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 187 -----VK-----------------GEANI-----SYICSRYYRAPELIFGATE--YTTSI 217
VK G A+I ++ + Y+ APE+I E Y +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 250
D+WS G EL +P NA+ L I +
Sbjct: 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 124/332 (37%), Gaps = 92/332 (27%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--------LMRLMDH 129
++ +++G GSFG VF A+ +T + AIK + +D + +++ L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMY-----------RVLKHYSSMNQRMP 176
P L H F + +K+ LF VMEY+ + MY R + + + +
Sbjct: 78 P---FLTHMFCTFQTKENLFF--VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 177 LIYVKLYTYQ--------------------------VKGEANISYICSR-YYRAPELIFG 209
++ K Y+ + G+A + C Y APE++ G
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 269
+Y S+D WS G +L E+L+GQ F G++ + IR NP Y
Sbjct: 193 -QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRMDNPFYP- 238
Query: 270 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDELR-EPNA 327
+ + EA DL +L P R + HP F E+ E
Sbjct: 239 ----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELE 282
Query: 328 RLPNGRPFPPLF-------NFKQELAGASPEL 352
R PF P NF +E P L
Sbjct: 283 RKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRL 314
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN S++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPELLTEKSAS 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 98 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN S++ + Y +PEL+ +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPELLTEKSAC 213
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 214 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 255
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 256 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 302
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 117/296 (39%), Gaps = 84/296 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 135 LKHCF---------FSTTSKDELFLNL--------------------VMEYV--PETMYR 163
L CF S EL + +EY+ ++R
Sbjct: 102 LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 164 VLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEYTTS 216
LK + + N+ M + T +V + AN ++ + Y +PEL+ + +S
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSACKSS 220
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+W+ GC++ +L+ G P F N +IIK+ ++ FP+
Sbjct: 221 -DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFPE-- 260
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 261 -----KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 306
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 50/211 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ + HPN I
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ--------- 186
+ C+ + LVMEY + +L+ + Q + + V Q
Sbjct: 81 RGCYLREHTA-----WLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 187 -----VK-----------------GEANI-----SYICSRYYRAPELIFGATE--YTTSI 217
VK G A+I ++ + Y+ APE+I E Y +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEI 248
D+WS G EL +P NA+ L I
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P +Y+ L+ S +++ Y+ +
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 182 LYTYQVK---------GEANI--------------SYICSRY-YRAPELIFGATEYTTSI 217
+ +K GE I + +C Y PE+I G + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKV 192
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 233
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 234 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 114/301 (37%), Gaps = 75/301 (24%)
Query: 66 IGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNREL 121
+ K G + ++G G FG V + + TG +A K + ++D+ E+
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY 179
+M +DH N+I L F SK+++ LVMEYV E R++ ++ + +++
Sbjct: 138 SVMNQLDHANLIQLYDAF---ESKNDIV--LVMEYVDGGELFDRIIDESYNLTELDTILF 192
Query: 180 VK-----------LYTYQ----------VKGEAN----ISYICSRYYRAPELI---FGAT 211
+K +Y V +A I + +R Y+ E + FG
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP 252
Query: 212 EY-----------TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
E+ + D+WS G + LL G F G+N + L I+ EE
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEF 312
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
+ + EA + S+LL S R +A EA HP+
Sbjct: 313 Q-------------------------DISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347
Query: 321 E 321
+
Sbjct: 348 D 348
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 134/348 (38%), Gaps = 89/348 (25%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYV-----------------PETMY---------RVLKHYSSMNQRMPL--------IY 179
+E PE Y + L + +++ + L +
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD 180
Query: 180 VKLYTY------QVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 233
VK+ + + GE + + Y APE + ++ +DIWS GC+L LL+G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 234 PLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI 293
P F E C+ Y +IK + + H + P A
Sbjct: 240 PPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--INPVAS 270
Query: 294 DLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 340
L R+L P+LR + E FF P RLP PP F+
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 94 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 161 MYRVLK-HYSSMNQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK +N+ M + T +V + AN S++ + Y +PEL+ +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPELLTEKSAC 209
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 210 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 251
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 252 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 298
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAX 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 133/348 (38%), Gaps = 89/348 (25%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYV-----------------PETMY---------RVLKHYSSMNQRMPL--------IY 179
+E PE Y + L + +++ + L +
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD 180
Query: 180 VKLYTY------QVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 233
VK+ + + GE + Y APE + ++ +DIWS GC+L LL+G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 234 PLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI 293
P F E C+ Y +IK + + H + P A
Sbjct: 240 PPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--INPVAS 270
Query: 294 DLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 340
L R+L P+LR + E FF P RLP PP F+
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 109/281 (38%), Gaps = 80/281 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYV-------------K 181
F T + L++EY P +Y+ L+ S +++ Y+ +
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 182 LYTYQVK---------GEANISYI-------CSRY--------YRAPELIFGATEYTTSI 217
+ +K GE I+ SR Y PE+I G + +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRM-HDEKV 192
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS G + E L+G+P F + I +V +F FP
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF-- 233
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
+ A DL SRLL+++PS R E HP+
Sbjct: 234 ----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 53/213 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLK 136
V+G GSFG V A T E AIK + +D ++ +++ ++ L+D P ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 137 HCFFSTTSKDELFLNLVMEYV--PETMYRVLK----------HYSS-------MNQRMPL 177
H F T + L VMEYV + MY + + Y++ + +
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 178 IY--VKLYTYQVKGEANISY----ICSRY---------------YRAPELIFGATEYTTS 216
IY +KL + E +I +C + Y APE+I Y S
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AYQPYGKS 200
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+D W+ G +L E+L GQP F GE+ D+L + I
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 30/150 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
+RAPE++ TT+ID+WSAG + LL G+ P + + + L +I+ + G +RE
Sbjct: 212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRG--SRET 269
Query: 260 IR-----------------------CMNPNYTDFRFPQ----IKAHPWHKVFHKRMPPEA 292
I+ C D P+ I+ H + +P EA
Sbjct: 270 IQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA 329
Query: 293 IDLASRLLQYSPSLRCTALEACAHPFFDEL 322
DL +LL +P+ R TA EA HPFF ++
Sbjct: 330 YDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN +++ + Y +PEL+ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-AFVGTAQYVSPELLTEKSAC 210
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 211 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 252
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 253 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 126/319 (39%), Gaps = 88/319 (27%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK--------KVLQDRRYKNRELQLMRLMDHPN 131
RV+G G +G VFQ + + TG+ A+K + +D + E ++ + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 132 VISLKHCF---------FSTTSKDELFLNLVME----------YVPET------------ 160
++ L + F S ELF+ L E Y+ E
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 161 MYRVLKHYSSMNQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+YR LK + M +VKL + + G ++ + Y APE++ + +
Sbjct: 143 IYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM-RSGHN 199
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
++D WS G ++ ++L G P F GEN + +I+K +
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC----------------------K 237
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDEL--REPNA 327
+ P+ + EA DL +LL+ + + R A E AHPFF + E A
Sbjct: 238 LNLPPY-------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA 290
Query: 328 RLPNGRPFPPLFNFKQELA 346
R PF PL +++++
Sbjct: 291 RKVE-PPFKPLLQSEEDVS 308
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 133/348 (38%), Gaps = 89/348 (25%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYV-----------------PETMY---------RVLKHYSSMNQRMPL--------IY 179
+E PE Y + L + +++ + L +
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD 180
Query: 180 VKLYTY------QVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 233
VK+ + + GE + Y APE + ++ +DIWS GC+L LL+G+
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGK 239
Query: 234 PLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI 293
P F E C+ Y +IK + + H + P A
Sbjct: 240 PPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--INPVAS 270
Query: 294 DLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 340
L R+L P+LR + E FF P RLP PP F+
Sbjct: 271 ALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 60/226 (26%)
Query: 73 PKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQLMR 125
P QT M ER+ GTG FG V + +TGE VAIK+ Q+ KNR E+Q+M+
Sbjct: 10 PTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 126 LMDHPNVISLKHC--FFSTTSKDELFLNLVMEYVP------------------------- 158
++HPNV+S + + ++L L L MEY
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 159 --------------ETMYRVLKHYSSMNQRMP--LIYVKLYTYQVKGEANISYICSRY-- 200
++R LK + + Q P LI+ K+ E + +C+ +
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAKELDQGELCTEFVG 186
Query: 201 ---YRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAV 242
Y APEL+ +YT ++D WS G + E + G +P P V
Sbjct: 187 TLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 231
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 60/226 (26%)
Query: 73 PKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQLMR 125
P QT M ER+ GTG FG V + +TGE VAIK+ Q+ KNR E+Q+M+
Sbjct: 9 PTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 126 LMDHPNVISLKHC--FFSTTSKDELFLNLVMEYVP------------------------- 158
++HPNV+S + + ++L L L MEY
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 159 --------------ETMYRVLKHYSSMNQRMP--LIYVKLYTYQVKGEANISYICSRY-- 200
++R LK + + Q P LI+ K+ E + +C+ +
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAKELDQGELCTEFVG 185
Query: 201 ---YRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAV 242
Y APEL+ +YT ++D WS G + E + G +P P V
Sbjct: 186 TLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 122/327 (37%), Gaps = 92/327 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--------LMRLMDHPNVIS 134
+++G GSFG VF A+ +T + AIK + +D + +++ L +HP
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP---F 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMY-----------RVLKHYSSMNQRMPLIYVK 181
L H F + +K+ LF VMEY+ + MY R + + + + ++ K
Sbjct: 81 LTHMFCTFQTKENLFF--VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 182 LYTYQ--------------------------VKGEANISYICSR-YYRAPELIFGATEYT 214
Y+ + G+A + C Y APE++ G +Y
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYN 197
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
S+D WS G +L E+L+GQ F G++ + IR NP Y
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRMDNPFYP------ 239
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDELR-EPNARLPNG 332
+ + EA DL +L P R + HP F E+ E R
Sbjct: 240 -----------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEID 288
Query: 333 RPFPPLF-------NFKQELAGASPEL 352
PF P NF +E P L
Sbjct: 289 PPFRPKVKSPFDCSNFDKEFLNEKPRL 315
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 98 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 213
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 214 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 255
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 256 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 302
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y ++ +G G+F V A+ + TG VA+K + D+ N RE+++M++++H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 128
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + G+ NI ++ S Y APEL G
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGK 188
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 210
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 211 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 252
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 253 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 210
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 211 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 252
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 253 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 212
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 213 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 254
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 255 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 121/317 (38%), Gaps = 84/317 (26%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLM 124
+P+ YM R +G G F ++ ++T E A K V + K + E+ +
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV-----------------PETMY----- 162
+ +D+P+V+ H FF +D+ F+ +V+E PE Y
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 163 ----RVLKHYSSMNQRMPL--------IYVKLYTY------QVKGEANISYICSRYYRAP 204
+ L + +++ + L + VK+ + + GE + Y AP
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 264
E + ++ +DIWS GC+L LL+G+P F E C+
Sbjct: 196 E-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSCLK 232
Query: 265 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 324
Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 233 ETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYA 285
Query: 325 PNARLPNG-RPFPPLFN 340
P RLP PP F+
Sbjct: 286 P-MRLPTSCLTVPPRFS 301
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 55/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 88/319 (27%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK--------KVLQDRRYKNRELQLMRLMDHPN 131
RV+G G +G VFQ + + TG+ A+K + +D + E ++ + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 132 VISLKHCF---------FSTTSKDELFLNLVME----------YVPET------------ 160
++ L + F S ELF+ L E Y+ E
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 161 MYRVLKHYSSMNQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+YR LK + M +VKL + + G + + Y APE++ + +
Sbjct: 143 IYRDLKPENIMLNHQG--HVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM-RSGHN 199
Query: 215 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
++D WS G ++ ++L G P F GEN + +I+K +
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC----------------------K 237
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDEL--REPNA 327
+ P+ + EA DL +LL+ + + R A E AHPFF + E A
Sbjct: 238 LNLPPY-------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA 290
Query: 328 RLPNGRPFPPLFNFKQELA 346
R PF PL +++++
Sbjct: 291 RKVE-PPFKPLLQSEEDVS 308
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 74 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 189
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 190 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 231
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 232 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 278
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 79 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 194
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 195 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 236
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 237 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 283
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 85/318 (26%)
Query: 73 PKQTISYMAERV--VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLM 124
K +S M +RV +G+G++G V + T AIK + + + E+ ++
Sbjct: 31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL 90
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVK-- 181
+L+DHPN++ L + FF +D+ LVME Y ++ + H N+ + +K
Sbjct: 91 KLLDHPNIMKL-YDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 182 ------LYTYQV---------------KGEANISYI------------------CSRYYR 202
L+ + + + +A I + + YY
Sbjct: 146 LSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 203 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 262
APE++ +Y D+WS G +L LL G P F G+ DQ EI++ +
Sbjct: 206 APEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQ--EILR----------KV 249
Query: 263 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 322
YT F P+ W K + A DL ++LQ+ R +A +A HP+ +
Sbjct: 250 EKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW---I 295
Query: 323 REPNARLPNGRPFPPLFN 340
+E ++ +G P L N
Sbjct: 296 KEMCSKKESGIELPSLAN 313
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 75/277 (27%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKK--VLQDRRYKNRELQLMRLMDHPNVISLKHCFFST 142
+G GS+G V++A ETG+ VAIK+ V D + +E+ +M+ D P+V+ +F
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 143 TSKDELFLNLVMEY------------------------VPETMYRVLKHYSSMNQRMPLI 178
T L +VMEY + ++ + L++ M + I
Sbjct: 97 TD-----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 179 -----------YVKLYTYQVKGEANI------SYICSRYYRAPELIFGATEYTTSIDIWS 221
+ KL + V G+ I + ++ APE+I Y DIWS
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-QEIGYNCVADIWS 210
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
G E+ G+P + + + + I PT NP T FR P++ W
Sbjct: 211 LGITAIEMAEGKPPYADIHPMRAIFMI------PT-------NPPPT-FRKPEL----WS 252
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
F D + L SP R TA + HPF
Sbjct: 253 DNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 127/310 (40%), Gaps = 81/310 (26%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P++ Y+A + +G GS GIV A TG+ VA+KK + R+ + REL +M
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKK-MDLRKQQRRELLFNEVVIM 96
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM--------- 175
R H NV+ + + S DEL+ +VME++ + ++ MN+
Sbjct: 97 RDYHHDNVVDM---YSSYLVGDELW--VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVL 151
Query: 176 -PLIY-----------------------VKL----YTYQVKGEA--NISYICSRYYRAPE 205
L Y +KL + QV E + + Y+ APE
Sbjct: 152 RALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE 211
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 265
+I Y T +DIWS G ++ E++ G+P + E + + IR P
Sbjct: 212 VI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM------------RRIRDSLP 258
Query: 266 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 325
P++K HKV + +DL +L PS R TA E HPF P
Sbjct: 259 -------PRVK--DLHKV--SSVLRGFLDL---MLVREPSQRATAQELLGHPFLKLAGPP 304
Query: 326 NARLPNGRPF 335
+ +P R +
Sbjct: 305 SCIVPLMRQY 314
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 75 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 190
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 191 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 232
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 233 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 279
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 73 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 188
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 189 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 230
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 231 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 72 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 187
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 188 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 229
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 230 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 135 LKHCFFSTTSKDELFLNL-------VMEYVPET--------------------------- 160
L +F+ ++L+ L +++Y+ +
Sbjct: 94 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 161 MYRVLK-HYSSMNQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK +N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 209
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 210 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 251
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ + P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 252 E------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L++ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 55/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L++ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L++ F KD L +VMEYVP
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 19 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 79 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 133
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAP 193
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 194 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY+P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY+P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 55/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 94/306 (30%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVI- 133
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 134 --------------------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
+L+ S DE L L EY P ++ R + +
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-NLKLQKEYNPISLLRQIASGVAHLH 150
Query: 174 RMPLIYVKL-------------YTYQVKGEANISYICSRY-------------------- 200
+ +I+ L Q G N+ + S +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 201 -----YRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
+RAPEL+ +T+ T SIDI+S GCV +L + P + + II+ G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR--G 267
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
+ +E++C++ + + EA DL S+++ + P R TA++
Sbjct: 268 IFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 314 CAHPFF 319
HP F
Sbjct: 308 LRHPLF 313
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 68/287 (23%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----RELQLMRLMDH 129
++T +M V+G+G+F VF K TG+ A+K + + +++ E+ +++ + H
Sbjct: 8 RKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 130 PNVISLKHCFFSTT---------SKDELFLNLV--------------------MEYVPET 160
N+++L+ + STT S ELF ++ ++Y+ E
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 161 --MYRVLK----HYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEY 213
++R LK Y + + ++ +++ +S C Y APE + Y
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPE-VLAQKPY 184
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+ ++D WS G + LL G P F E +L E IK Y +F P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK--------------EGYYEFESP 229
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
F + A D LL+ P+ R T +A +HP+ D
Sbjct: 230 ----------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 94/306 (30%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVI- 133
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 134 --------------------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
+L+ S DE L L EY P ++ R + +
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-NLKLQKEYNPISLLRQIASGVAHLH 150
Query: 174 RMPLIYVKL-------------YTYQVKGEANISYICSRY-------------------- 200
+ +I+ L Q G N+ + S +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 201 -----YRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
+RAPEL+ +T+ T SIDI+S GCV +L + P + + II+ G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR--G 267
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
+ +E++C++ + + EA DL S+++ + P R TA++
Sbjct: 268 IFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 314 CAHPFF 319
HP F
Sbjct: 308 LRHPLF 313
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 161 MYRVLKHYSSM-NQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + + N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 210
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 211 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 252
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
+ K F P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 253 E-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 106/291 (36%), Gaps = 67/291 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCF- 139
+GTG+FG+V + TG A K V+ D+ +E+Q M ++ HP +++L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 140 --------FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEA 191
+ S ELF + E+ + +++ + + + ++ Y +
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 192 NISYICSRYYRAPELIFGATEY---------TTS------------------IDIWSAGC 224
NI + R + FG T + TT D+WS G
Sbjct: 179 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 225 VLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVF 284
+ LL G F GEN + L ++ + N D F I
Sbjct: 239 LSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSGISE------- 279
Query: 285 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP--NARLPNGR 333
+ D +LL P+ R T +A HP+ P ++++P+ R
Sbjct: 280 ------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSR 324
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 114 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 168
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 228
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 229 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 106/291 (36%), Gaps = 67/291 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCF- 139
+GTG+FG+V + TG A K V+ D+ +E+Q M ++ HP +++L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 140 --------FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEA 191
+ S ELF + E+ + +++ + + + ++ Y +
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 192 NISYICSRYYRAPELIFGATEY---------TTS------------------IDIWSAGC 224
NI + R + FG T + TT D+WS G
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 225 VLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVF 284
+ LL G F GEN + L ++ + N D F I
Sbjct: 345 LSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSGISE------- 385
Query: 285 HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP--NARLPNGR 333
+ D +LL P+ R T +A HP+ P ++++P+ R
Sbjct: 386 ------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSR 430
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 26/126 (20%)
Query: 200 YYRAPELIFGATE-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 258
Y+ APE++ E Y D WSAG +L LL+G FPG N D + +++ +
Sbjct: 239 YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------K 291
Query: 259 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
++ NPNY + P A DL S LL + R A+ A HP+
Sbjct: 292 KLCFENPNYN------------------VLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333
Query: 319 FDELRE 324
+ +
Sbjct: 334 ISQFSD 339
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQ----DRRYKNRELQLMRLMDH 129
Y + +G GS+G+V A +T AIK K+ Q D E++LM+ + H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 130 PNVISLKHCFFSTTSKDELFLNLVME 155
PN+ L + +DE ++ LVME
Sbjct: 88 PNIARLYEVY-----EDEQYICLVME 108
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 88/306 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVK------LYTYQ-- 186
+ F D + L++E+ P +Y+ L+ + +++ +++ Y ++
Sbjct: 81 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 187 --------------VKGEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
KGE I+ +C Y PE+I G T + +
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKV 194
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+W AG + E L+G P F + + I+ V D +FP
Sbjct: 195 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF-- 235
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPP 337
+ + DL S+LL+Y P R HP+ + N+R R PP
Sbjct: 236 ----------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPP 277
Query: 338 LFNFKQ 343
++ Q
Sbjct: 278 VYQSTQ 283
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 88/306 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVK------LYTYQ-- 186
+ F D + L++E+ P +Y+ L+ + +++ +++ Y ++
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 187 --------------VKGEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
KGE I+ +C Y PE+I G T + +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKV 193
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+W AG + E L+G P F + + I+ V D +FP
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF-- 234
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPP 337
+ + DL S+LL+Y P R HP+ + N+R R PP
Sbjct: 235 ----------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPP 276
Query: 338 LFNFKQ 343
++ Q
Sbjct: 277 VYQSTQ 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 140
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 200
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 201 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P + L+ F KD L +VMEY P
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P + L+ F KD L +VMEY P
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P + L+ F KD L +VMEY P
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 90/299 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AI K+L+ R Y RE +M +DHP +
Sbjct: 41 KILGEGSFSTVVLARELATSREYAI-KILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 135 LKHCFFSTTSKDELFLNL--------------------------------VMEYV--PET 160
L +F+ ++L+ L +EY+
Sbjct: 100 L---YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 161 MYRVLKHYSS-MNQRMPLIYVKLYTYQV------KGEANISYICSRYYRAPELIFGATEY 213
++R LK + +N+ M + T +V + AN ++ + Y +PEL+ +
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPELLTEKSAC 215
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
+S D+W+ GC++ +L+ G P F N +IIK+ ++ FP
Sbjct: 216 KSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP 257
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFDELREPN 326
P+A DL +LL + R C +E AHPFF+ + N
Sbjct: 258 AA------------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 304
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYVP
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA 140
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 200
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 201 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 88/306 (28%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVK------LYTYQ-- 186
+ F D + L++E+ P +Y+ L+ + +++ +++ Y ++
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 187 --------------VKGEANIS--------------YICSRY-YRAPELIFGATEYTTSI 217
KGE I+ +C Y PE+I G T + +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKV 193
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+W AG + E L+G P F + + I+ V D +FP
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF-- 234
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPP 337
+ + DL S+LL+Y P R HP+ + N+R R PP
Sbjct: 235 ----------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPP 276
Query: 338 LFNFKQ 343
++ Q
Sbjct: 277 VYQSTQ 282
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 54/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEY P
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + M + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 118/306 (38%), Gaps = 77/306 (25%)
Query: 65 TIGGKNGEPKQTISYMAERV---------VGTGSFGIVFQAKCLETGETVAIK----KVL 111
++ +NGE + AE + +GTG+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 112 QDRRYK-NRELQLMRLMDHPNVISLKHCFFS---------TTSKDELFLNLV-------- 153
+ + E+ ++R + H N+++L+ + S S ELF +V
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK 120
Query: 154 -----MEYVPETMY---------RVLK----HYSSMNQRMPLIYVKLYTYQVKGEANI-S 194
+ V + +Y R LK Y S ++ ++ +++G+ ++ S
Sbjct: 121 DASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 195 YICSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
C Y APE + Y+ ++D WS G + LL G P F EN +I+K
Sbjct: 181 TACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA-- 237
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
E +P + D + A D L++ P+ R T +A
Sbjct: 238 -----EYEFDSPYWDD------------------ISDSAKDFIRNLMEKDPNKRYTCEQA 274
Query: 314 CAHPFF 319
HP+
Sbjct: 275 ARHPWI 280
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 111/285 (38%), Gaps = 67/285 (23%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDRRYKNRELQLMR-LMDHPNVIS 134
+S + R V + G F K +E T E ++ +++ + R RE ++R + HP++I+
Sbjct: 106 VSSVVRRCVHRAT-GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 135 LKHCF---------FSTTSKDELFLNL-----VMEYVPETMYRVLKHYSSMNQRMPLIYV 180
L + F K ELF L + E ++ R L S +++
Sbjct: 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 181 KLYTYQVKGEANISYICSRY--------------------YRAPELIFGATE-----YTT 215
L + + N+ S + Y APE++ + + Y
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI 275
+D+W+ G +L LL G P F + L I++ + + +P + D R +
Sbjct: 285 EVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME-------GQYQFSSPEWDD-RSSTV 336
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
K DL SRLLQ P R TA +A HPFF+
Sbjct: 337 K-----------------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+++ ++ P ++ L+ F KD L +VMEYV
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 208 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 111/289 (38%), Gaps = 74/289 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVI 133
++ +R +G+G+FG V + +G IK + +DR E+++++ +DHPN+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 134 SLKHCF---------FSTTSKDELFLNLVME----------YVPETMYRVLKHYSSMNQR 174
+ F T EL +V YV E M +++ + + +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 175 ----------------------MPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATE 212
+ +I L E + + + Y APE+ +
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF--KRD 201
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
T DIWSAG V+ LL G F G + + +V T +E PNY
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTS-------LEEVQQKATYKE-----PNYA---- 245
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
++ P + P+A+DL ++L P R +A + H +F +
Sbjct: 246 --VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 60/249 (24%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 9 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 62
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCF------------------FSTTSKDEL 148
DR E ++ ++HP ++ L + F F+ SK+ +
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------------VKLYTYQVKGEA-- 191
F +++ + L H S+ +IY +KL + + E+
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
Query: 192 ----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 247
S+ + Y APE++ +T S D WS G ++ E+L G F G++ + +
Sbjct: 179 HEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 248 IIKV-LGTP 255
I+K LG P
Sbjct: 238 ILKAKLGMP 246
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 109/286 (38%), Gaps = 73/286 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------ELQLMRLMDHPN 131
Y + +G+G++G V K TG AIK + + E+ +++ +DHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 132 VISLKHCFFSTTSK--------------DELFLN---------LVMEYVPETMYRVLKH- 167
++ L + FF DE+ L ++M+ V + KH
Sbjct: 66 IMKL-YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 168 --------------YSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEY 213
S + + ++ L + G + + YY APE++ +Y
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RKKY 182
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
D+WS G +L LL G P F G+ DQ EI+K R ++ F P
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQT--DQ--EILK----------RVEKGKFS-FDPP 227
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
W +V EA L +L Y PS R +A EA HP+
Sbjct: 228 -----DWTQV-----SDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAI----KKVLQDRRYKN---RELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+ KKVL + RE+ +RL+ HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR------MPLIYVKLYT 184
++I L + SKDE+ +V+EY ++ + M+++ +I Y
Sbjct: 69 HIIKL---YDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 185 YQVK------------------------GEANI--------SYICSRYYRAPELIFGATE 212
++ K G +NI + S Y APE+I G
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L +L + F E+
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG VAIK + D+ N RE+++M++++H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 70
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L L+MEY ++ L + M ++ ++
Sbjct: 71 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 125
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ S Y APEL G
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGK 185
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAI----KKVLQDRRYKN---RELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+ KKVL + RE+ +RL+ HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR------MPLIYVKLYT 184
++I L + SKDE+ +V+EY ++ + M+++ +I Y
Sbjct: 65 HIIKL---YDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 185 YQVK------------------------GEANI--------SYICSRYYRAPELIFGATE 212
++ K G +NI + S Y APE+I G
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L +L + F E+
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 123/330 (37%), Gaps = 98/330 (29%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRY-----KNRELQLMRLMDHPNV 132
RV+G GSFG V A+ ETG+ A+K +LQD + R L L R +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR--NHPFL 86
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLK--HYSSMNQRM------------- 175
L CF + D LF VME+V + M+ + K + R
Sbjct: 87 TQLFCCF---QTPDRLF--FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 176 --PLIYVKLYTYQV---------------------KGEANISYICSRYYRAPELIFGATE 212
+IY L V G ++ + Y APE I
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQEML 200
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
Y ++D W+ G +L E+L G F EN D L E I +E+
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI------LNDEV------------ 241
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA------HPFFDELREPN 326
V+ + +A + + +P++R +L HPFF E+
Sbjct: 242 ----------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW-- 289
Query: 327 ARLPNGR---PFPPLFNFKQELAGASPELI 353
A+L + + PF P +++++ P+ I
Sbjct: 290 AQLNHRQIEPPFRPRIKSREDVSNFDPDFI 319
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAI----KKVLQDRRYKN---RELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+ KKVL + RE+ +RL+ HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR------MPLIYVKLYT 184
++I L + SKDE+ +V+EY ++ + M+++ +I Y
Sbjct: 74 HIIKL---YDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 185 YQVK------------------------GEANI--------SYICSRYYRAPELIFGATE 212
++ K G +NI + S Y APE+I G
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L +L + F E+
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 60/249 (24%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 9 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 62
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCF------------------FSTTSKDEL 148
DR E ++ ++HP ++ L + F F+ SK+ +
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------------VKLYTYQVKGEA-- 191
F +++ + L H S+ +IY +KL + + E+
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
Query: 192 ----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 247
S+ + Y APE++ +T S D WS G ++ E+L G F G++ + +
Sbjct: 179 HEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
Query: 248 IIKV-LGTP 255
I+K LG P
Sbjct: 238 ILKAKLGMP 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAI----KKVLQDRRYKN---RELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+ KKVL + RE+ +RL+ HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR------MPLIYVKLYT 184
++I L + SKDE+ +V+EY ++ + M+++ +I Y
Sbjct: 75 HIIKL---YDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 185 YQVK------------------------GEANI--------SYICSRYYRAPELIFGATE 212
++ K G +NI + S Y APE+I G
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 213 YTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L +L + F E+
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 73/291 (25%)
Query: 75 QTISYMAERV--VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------ELQLMR 125
Q +S +RV +G+G++G V K TG AIK + + E+ +++
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 126 LMDHPNVISLKHCF---------FSTTSKDELFLNLVM--------------EYVPETMY 162
+DHPN++ L F ELF +++ + + T Y
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 163 --------------RVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIF 208
+L S + + ++ L + G + + YY APE++
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL- 195
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
+Y D+WS G +L LL G P F G+ DQ ++L + + P++T
Sbjct: 196 -RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKFSFDPPDWT 247
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
++ EA L +L Y PS R +A EA HP+
Sbjct: 248 ------------------QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 60/249 (24%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 10 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 63
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCF------------------FSTTSKDEL 148
DR E ++ ++HP ++ L + F F+ SK+ +
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM 123
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---------------VKLYTYQVKGEA-- 191
F +++ + L H S+ +IY +KL + + E+
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
Query: 192 ----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 247
S+ + Y APE++ +T S D WS G ++ E+L G F G++ + +
Sbjct: 180 HEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
Query: 248 IIKV-LGTP 255
I+K LG P
Sbjct: 239 ILKAKLGMP 247
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ S Y APEL G
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ S Y APEL G
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 188 KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 247
K + + S I +R YRAPE+I + S D+WS GCVLAEL G LF ++ L
Sbjct: 212 KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAM 270
Query: 248 IIKVL----------GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFH--KRMPPEAI-- 293
+ ++ T T + +N + +P+ A + + H K +P I
Sbjct: 271 MESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPE-NASSINSIKHVKKCLPLYKIIK 328
Query: 294 -----DLASRLLQYSPSLRCTALEACAHPFFD 320
D +LQ P+LR + E H F +
Sbjct: 329 HELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 55/244 (22%)
Query: 62 ISTTIGGKNGEPKQTISYMAE-RVVGTGSFGIVFQAKCL---ETGETVAIKKV------L 111
IS T K G K S+ +V+G GSFG VF + + ++G A+K + +
Sbjct: 12 ISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKV 71
Query: 112 QDRRYKNRELQLMRLMDHPNVISLKHCF------------------FSTTSKDELFLNLV 153
+DR E ++ ++HP V+ L + F F+ SK+ +F
Sbjct: 72 RDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 131
Query: 154 MEYVPETMYRVLKHYSSMNQRMPLIY---------------VKLYTYQVKGEA------N 192
+++ + L H S+ +IY +KL + + EA
Sbjct: 132 VKFYLAELALGLDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA 187
Query: 193 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV- 251
S+ + Y APE++ ++ S D WS G ++ E+L G F G++ + + I+K
Sbjct: 188 YSFCGTVEYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
Query: 252 LGTP 255
LG P
Sbjct: 247 LGMP 250
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 55/225 (24%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + R +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP----------------------- 158
+ + ++ P ++ L+ F KD L +V+EY P
Sbjct: 94 RIQQAVNFPFLVKLEFSF-----KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 159 -------------ETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAP 204
+ +YR LK + + + I V + + + + +C Y AP
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
E+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 110/289 (38%), Gaps = 78/289 (26%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVA-----IKKVLQDRRYKNRELQLMRLMDHPNVI 133
YM +G G FGIV +C+ET +K D+ +E+ ++ + H N++
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVK--------LY 183
L F S +EL + + E++ + R+ +N+R + YV L+
Sbjct: 65 HLHESF---ESMEELVM--IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 184 T--------------YQVKGEANISYICSRYYRAPE------LIFGATEY---------- 213
+ YQ + + I I R + L+F A EY
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 214 -TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 272
+T+ D+WS G ++ LL G F E Q++E I MN YT
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAEYT---- 221
Query: 273 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+ + K + EA+D RLL R TA EA HP+ +
Sbjct: 222 -------FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 120/310 (38%), Gaps = 98/310 (31%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVI- 133
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 134 --------------------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
+L+ S DE L L EY P ++ R + +
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-NLKLQKEYNPISLLRQIASGVAHLH 132
Query: 174 RMPLIYVKL-------------YTYQVKGEANISYICSRY-------------------- 200
+ +I+ L Q G N+ + S +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 201 -----YRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+RAPEL+ + T SIDI+S GCV +L + P + + II
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNII 251
Query: 250 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
+ G + +E++C++ + + EA DL S+++ + P R T
Sbjct: 252 R--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPT 289
Query: 310 ALEACAHPFF 319
A++ HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 66 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ S Y APEL G
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 180
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG VAIK + D+ N RE+++M++++H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L L+MEY ++ L + M ++ ++
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ + Y APEL G
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA++ + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ S Y APEL G
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 120/310 (38%), Gaps = 98/310 (31%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVI- 133
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 134 --------------------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
+L+ S DE L L EY P ++ R + +
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDE-NLKLQKEYNPISLLRQIASGVAHLH 132
Query: 174 RMPLIYVKL-------------YTYQVKGEANISYICSRY-------------------- 200
+ +I+ L Q G N+ + S +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 201 -----YRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+RAPEL+ + T SIDI+S GCV +L + P + + II
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNII 251
Query: 250 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
+ G + +E++C++ + + EA DL S+++ + P R T
Sbjct: 252 R--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPT 289
Query: 310 ALEACAHPFF 319
A++ HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 77 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 137 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 196
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 245
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 246 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 52/243 (21%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------QR 174
+PN+++ + DEL++ VMEY+ + + M+ Q
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 175 MPLIY---------------------VKLYTY----QVKGEAN--ISYICSRYYRAPELI 207
+ ++ VKL + Q+ E + + + + Y+ APE++
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 208 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
Y +DIWS G + E++ G+P + EN + L +I GTP + ++ +
Sbjct: 189 TRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIF 246
Query: 268 TDF 270
DF
Sbjct: 247 RDF 249
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 73/302 (24%)
Query: 70 NGEPKQTI-SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QL 123
G+P+ + SY+ +G GS GIV A+ +G VA+K ++ R+ + REL +
Sbjct: 40 QGDPRLLLDSYVK---IGEGSTGIVCLAREKHSGRQVAVK-MMDLRKQQRRELLFNEVVI 95
Query: 124 MRLMDHPNVISLKHCFF---------------------STTSKDELFLNLVMEYVPETM- 161
MR H NV+ + + S +E + V E V + +
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALA 155
Query: 162 --------YRVLKHYS---SMNQRMPLIYVKLYTYQVKGEA--NISYICSRYYRAPELIF 208
+R +K S +++ R+ L + Q+ + + + Y+ APE+I
Sbjct: 156 YLHAQGVIHRDIKSDSILLTLDGRVKLSDFG-FCAQISKDVPKRKXLVGTPYWMAPEVI- 213
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
+ Y T +DIWS G ++ E++ G+P + ++ V + + +R P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------KRLRDSPP--- 258
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 328
P++K HKV P D R+L P R TA E HPF + P
Sbjct: 259 ----PKLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECL 307
Query: 329 LP 330
+P
Sbjct: 308 VP 309
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 65/260 (25%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCF---------FSTTSKDELFLN 151
G + + ++V + R +E+ ++R + HPN+I LK + F K ELF
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 152 L-----VMEYVPETMYRVLKHYSSMNQRMPLIYVKL-------------------YTYQV 187
L + E + R L ++ +++ L ++ Q+
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 188 KGEANISYICSR-YYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENA 241
+ +C Y APE+I + Y +D+WS G ++ LL G P F
Sbjct: 175 DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
Query: 242 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 301
+ L I M+ NY Q + W DL SR L
Sbjct: 235 MLMLRMI--------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLV 269
Query: 302 YSPSLRCTALEACAHPFFDE 321
P R TA EA AHPFF +
Sbjct: 270 VQPQKRYTAEEALAHPFFQQ 289
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 183 YTYQ--------------VKGEANI------------------SYICSRYYRAPELIFGA 210
Y +Q + + NI ++ + Y APEL G
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGK 187
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 65/260 (25%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCF---------FSTTSKDELFLN 151
G + + ++V + R +E+ ++R + HPN+I LK + F K ELF
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 114
Query: 152 L-----VMEYVPETMYRVLKHYSSMNQRMPLIYVKL-------------------YTYQV 187
L + E + R L ++ +++ L ++ Q+
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 188 KGEANISYICSR-YYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENA 241
+ +C Y APE+I + Y +D+WS G ++ LL G P F
Sbjct: 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
Query: 242 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 301
+ L I M+ NY Q + W DL SR L
Sbjct: 235 MLMLRMI--------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLV 269
Query: 302 YSPSLRCTALEACAHPFFDE 321
P R TA EA AHPFF +
Sbjct: 270 VQPQKRYTAEEALAHPFFQQ 289
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 70 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 130 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 189
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 190 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 238
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 239 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 239
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 240 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 52/243 (21%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------QR 174
+PN+++ + DEL++ VMEY+ + + M+ Q
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 175 MPLIY---------------------VKLYTY----QVKGEAN--ISYICSRYYRAPELI 207
+ ++ VKL + Q+ E + + + + Y+ APE++
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 208 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
Y +DIWS G + E++ G+P + EN + L +I GTP + ++ +
Sbjct: 190 TRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIF 247
Query: 268 TDF 270
DF
Sbjct: 248 RDF 250
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 239
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 240 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 65/260 (25%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCF---------FSTTSKDELFLN 151
G + + ++V + R +E+ ++R + HPN+I LK + F K ELF
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 101
Query: 152 L-----VMEYVPETMYRVLKHYSSMNQRMPLIYVKL-------------------YTYQV 187
L + E + R L ++ +++ L ++ Q+
Sbjct: 102 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
Query: 188 KGEANISYICSR-YYRAPELIFGATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENA 241
+ +C Y APE+I + Y +D+WS G ++ LL G P F
Sbjct: 162 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 221
Query: 242 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 301
+ L I M+ NY Q + W DL SR L
Sbjct: 222 MLMLRMI--------------MSGNY------QFGSPEWDD-----YSDTVKDLVSRFLV 256
Query: 302 YSPSLRCTALEACAHPFFDE 321
P R TA EA AHPFF +
Sbjct: 257 VQPQKRYTAEEALAHPFFQQ 276
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 190
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 239
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 240 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 54/202 (26%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYK---NRELQLMRLMDHPNVISLKHCF 139
V+G G++GIV+ + L +AIK++ + D RY + E+ L + + H N++ F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------- 186
+ F+ + ME VP L + + YT Q
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 187 ----VKGE----------------------ANI-----SYICSRYYRAPELI-FGATEYT 214
+KG+ A I ++ + Y APE+I G Y
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 215 TSIDIWSAGCVLAELLLGQPLF 236
+ DIWS GC + E+ G+P F
Sbjct: 204 KAADIWSLGCTIIEMATGKPPF 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 69/293 (23%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQL 123
N K + +Y + +G G+F +V + TG A K K L R ++ RE ++
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 124 MRLMDHPNVI---------SLKHCFFSTTSKDELFLNLVM-EYVPET------------- 160
R + HPN++ S + F + ELF ++V E+ E
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 141
Query: 161 --------MYRVLKHYS-SMNQRMPLIYVKLYTYQVKGEANISYICSRY-----YRAPEL 206
++R LK + + + VKL + + E N S + Y +PE
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE- 200
Query: 207 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 266
+ Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---------------KAG 245
Query: 267 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
D+ P+ W V PEA L +L +P R TA +A P+
Sbjct: 246 AYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 52/243 (21%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------QR 174
+PN+++ + DEL++ VMEY+ + + M+ Q
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 175 MPLIY---------------------VKLYTY----QVKGEAN--ISYICSRYYRAPELI 207
+ ++ VKL + Q+ E + + + Y+ APE++
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 208 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
Y +DIWS G + E++ G+P + EN + L +I GTP + ++ +
Sbjct: 189 TRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIF 246
Query: 268 TDF 270
DF
Sbjct: 247 RDF 249
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 54/210 (25%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA++ + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQR------MPLIYVKL 182
PN++ L + E L LVMEY ++ L + M ++ ++
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 183 YTYQ--------------VKGEANIS------------------YICSRYYRAPELIFGA 210
Y +Q + + NI + S Y APEL G
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGK 187
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 110/290 (37%), Gaps = 82/290 (28%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-------------------ETMYRVLKHYSSM 171
++I L + ST S ++F+ VMEYV +++ +
Sbjct: 77 HIIKL-YQVISTPS--DIFM--VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 172 NQRMPLIYVKLYTYQVKGEANISYICSRY--------------------YRAPELIFGAT 211
R +++ L V +A+++ + + Y APE+I G
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 212 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 271
+DIWS+G +L LL G F ++ PT + C YT
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFKKICDGIFYT--- 235
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
PQ + P I L +LQ P R T + H +F +
Sbjct: 236 -PQY------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 54/202 (26%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYK---NRELQLMRLMDHPNVISLKHCF 139
V+G G++GIV+ + L +AIK++ + D RY + E+ L + + H N++ F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ------------- 186
+ F+ + ME VP L + + YT Q
Sbjct: 75 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 187 ----VKGE----------------------ANI-----SYICSRYYRAPELI-FGATEYT 214
+KG+ A I ++ + Y APE+I G Y
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 215 TSIDIWSAGCVLAELLLGQPLF 236
+ DIWS GC + E+ G+P F
Sbjct: 190 KAADIWSLGCTIIEMATGKPPF 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 52/243 (21%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVK----- 181
+PN+++ + DEL++ VMEY+ + + M++ +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 182 ---LYTYQV--------------KGEANIS-----------------YICSRYYRAPELI 207
L++ QV G ++ + + Y+ APE++
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 208 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
Y +DIWS G + E++ G+P + EN + L +I GTP + ++ +
Sbjct: 190 TRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIF 247
Query: 268 TDF 270
DF
Sbjct: 248 RDF 250
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 68/278 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYK-NRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK K L+ + E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFST---------TSKDELFLNLV--------------------MEYVPE--TMYRVLK- 166
+ S S ELF +V ++Y+ + ++R LK
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 167 ---HYSSMNQRMPLIYVKLYTYQVKGEANI-SYICSR-YYRAPELIFGATEYTTSIDIWS 221
Y S+++ ++ +++ ++ S C Y APE + Y+ ++D WS
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWS 203
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
G + LL G P F EN +I+K E +P + D
Sbjct: 204 IGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD------------ 244
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A D L++ P R T +A HP+
Sbjct: 245 ------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 52/243 (21%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN------------QR 174
+PN+++ + DEL++ VMEY+ + + M+ Q
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 175 MPLIY---------------------VKLYTY----QVKGEAN--ISYICSRYYRAPELI 207
+ ++ VKL + Q+ E + + + Y+ APE++
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 208 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
Y +DIWS G + E++ G+P + EN + L +I GTP + ++ +
Sbjct: 189 TRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIF 246
Query: 268 TDF 270
DF
Sbjct: 247 RDF 249
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 128 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 182
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 241
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 83/284 (29%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLK 136
++G GSF V++A+ + TG VAIK + + YK E+++ + HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPE-TMYRVLKH----YSSMNQR---MPLIYVKLYTY--- 185
+ F +D ++ LV+E M R LK+ +S R +I LY +
Sbjct: 78 NYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 186 ----------------------------QVK--GEANISYICSRYYRAPELIFGATEYTT 215
Q+K E + + + Y +PE I + +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSAHGL 191
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI 275
D+WS GC+ LL+G+P F + + L +++ D+ P
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-----------------LADYEMPSF 234
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ EA DL +LL+ +P+ R + HPF
Sbjct: 235 ------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 108 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 221
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 50/211 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + +I+
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 72/285 (25%)
Query: 73 PKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKKV---LQDRRYKNRELQL- 123
P+Q + AE + +G G++G V + +G+ +A+K++ + ++ K + L
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 124 --MRLMDHPNVISLKHCFFS-----------TTSKDELF---LNLVMEYVPETMY----- 162
MR D P ++ F +TS D+ + +++ + +PE +
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITL 132
Query: 163 RVLKHYSSMNQRMPLIY---------------VKLYTYQVKGE-----ANISYICSRYYR 202
+K + + + + +I+ +KL + + G+ A R Y
Sbjct: 133 ATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYM 192
Query: 203 APELIFGATE---YTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTP--- 255
APE I + Y D+WS G L EL G+ +P N+V DQL +++K G P
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQL 250
Query: 256 TREEIRCMNPNYTDF-------------RFPQIKAHPWHKVFHKR 287
+ E R +P++ +F ++ ++ HP+ ++ +R
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPI-QIYEKI 250
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 102 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 156
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 215
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 107/285 (37%), Gaps = 76/285 (26%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISL 135
R +GTGSFG V + G A+K + L+ + N E ++ ++ HP +I +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 136 KHCF------------------FSTTSKDELFLN-----------LVMEYV--PETMYRV 164
F FS K + F N L +EY+ + +YR
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131
Query: 165 LKHYSSMNQRMPLIYVKLYTYQVKGEANISY-ICSR-YYRAPELIFGATEYTTSIDIWSA 222
LK + + + I + + + K +++Y +C Y APE++ Y SID WS
Sbjct: 132 LKPENILLDKNGHIKITDFGF-AKYVPDVTYXLCGTPDYIAPEVV-STKPYNKSIDWWSF 189
Query: 223 GCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHK 282
G ++ E+L G F N + +I+ + RFP
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKILN-----------------AELRFPPF------- 225
Query: 283 VFHKRMPPEAIDLASRLLQYSPSLRCTALEACA-----HPFFDEL 322
+ DL SRL+ S R L+ HP+F E+
Sbjct: 226 -----FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 53/212 (25%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 128 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 182
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTY--QVKGEANISYICSRYYRAPELIFGATEYTTSI 217
+YR LK + + + I V + + +VKG A + + Y APE+I + Y ++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-ATWTLCGTPEYLAPEIIL-SKGYNKAV 240
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 241 DWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIII-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 65/206 (31%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCF 139
V+G G FG + ETGE + +K+++ + +R +E+++MR ++HPNV+ F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK----F 72
Query: 140 FSTTSKDELFLNLVMEYVP-ETMYRVLKHYSS---MNQR----------------MPLIY 179
KD+ LN + EY+ T+ ++K S +QR M +I+
Sbjct: 73 IGVLYKDKR-LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 180 VKLYTYQ--VKGEANI---------------------------------SYICSRYYRAP 204
L ++ V+ N+ + + + Y+ AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 205 ELIFGATEYTTSIDIWSAGCVLAELL 230
E+I G + Y +D++S G VL E++
Sbjct: 192 EMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 56/252 (22%)
Query: 48 AAVIQGNDA---VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGET 104
A + QG A T + IS N + + + V+G GSFG V ++ T E
Sbjct: 309 AKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDEL 368
Query: 105 VAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 157
A+K + +D ++ +++ ++ L P ++ H F T + L VMEYV
Sbjct: 369 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYV 424
Query: 158 --PETMYRVLK----------HYSS-------MNQRMPLIY--VKLYTYQVKGEANIS-- 194
+ MY + + Y++ Q +IY +KL + E +I
Sbjct: 425 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA 484
Query: 195 -----------------YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFP 237
+ + Y APE+I Y S+D W+ G +L E+L GQ F
Sbjct: 485 DFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
Query: 238 GENAVDQLVEII 249
GE+ D+L + I
Sbjct: 544 GEDE-DELFQSI 554
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 94 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 148
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 207
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAI+ ++ R++ E+++++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 196 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 364
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 365 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 195
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 196 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 253
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 254 SLVEMAVGRYPIPPPDA 270
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 68/278 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFS---------TTSKDELFLNLV--------------------MEYVPE--TMYRVLK- 166
+ S S ELF +V ++Y+ + ++R LK
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 167 ---HYSSMNQRMPLIYVKLYTYQVKGEANI-SYICSR-YYRAPELIFGATEYTTSIDIWS 221
Y S+++ ++ +++ ++ S C Y APE + Y+ ++D WS
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWS 203
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
G + LL G P F EN +I+K E +P + D
Sbjct: 204 IGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD------------ 244
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A D L++ P R T +A HP+
Sbjct: 245 ------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 68/278 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFS---------TTSKDELFLNLV--------------------MEYVPE--TMYRVLK- 166
+ S S ELF +V ++Y+ + ++R LK
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 167 ---HYSSMNQRMPLIYVKLYTYQVKGEANI-SYICSR-YYRAPELIFGATEYTTSIDIWS 221
Y S+++ ++ +++ ++ S C Y APE + Y+ ++D WS
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWS 203
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
G + LL G P F EN +I+K E +P + D
Sbjct: 204 IGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD------------ 244
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A D L++ P R T +A HP+
Sbjct: 245 ------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 68/278 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFS---------TTSKDELFLNLV--------------------MEYVPE--TMYRVLK- 166
+ S S ELF +V ++Y+ + ++R LK
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 144
Query: 167 ---HYSSMNQRMPLIYVKLYTYQVKGEANI-SYICSR-YYRAPELIFGATEYTTSIDIWS 221
Y S+++ ++ +++ ++ S C Y APE + Y+ ++D WS
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSKAVDCWS 203
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
G + LL G P F EN +I+K E +P + D
Sbjct: 204 IGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD------------ 244
Query: 282 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ A D L++ P R T +A HP+
Sbjct: 245 ------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 76/294 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAI+ ++ R++ E+++++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 126 LMDHPNVISLKHCF--------FSTTSKDELF--------------------LNLVMEYV 157
++HP +I +K+ F ELF + L ++Y+
Sbjct: 210 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 158 PET--MYRVLKHYS---SMNQRMPLIYVKLYTY-QVKGEANI-SYICSR-YYRAPELIF- 208
E ++R LK + S + LI + + + ++ GE ++ +C Y APE++
Sbjct: 270 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Query: 209 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 267
G Y ++D WS G +L L G P F L +++I N+
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------KDQITSGKYNF 378
Query: 268 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
P++ W +V K A+DL +LL P R T EA HP+ +
Sbjct: 379 ----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ ++ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPI-QIYEKI 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 192 SLVEMAVGRYPIPPPDA 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCF 139
++G+G FG VF+AK G+T IK+V + RE++ + +DH N++ C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCW 73
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 85 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 135
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 136 YLGTKRY 142
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 83 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 133
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 134 YLGTKRY 140
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 83 RVVGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVIS 134
R +G G+FG V + TGE VA+KK+ R RE+++++ + H N++
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEAN 192
K +S ++ L L+ME++P Y L+ Y +R+ I + YT Q+ KG
Sbjct: 79 YKGVCYSAGRRN---LKLIMEFLP---YGSLREYLQKHKERIDHIKLLQYTSQICKG--- 129
Query: 193 ISYICSRYY 201
+ Y+ ++ Y
Sbjct: 130 MEYLGTKRY 138
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVIS 134
Y+ + +G G F V + L G A+K++L QDR RE + RL +HPN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 135 L-KHCFFSTTSKDELFLNL 152
L +C +K E +L L
Sbjct: 91 LVAYCLRERGAKHEAWLLL 109
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 164 VLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT---SIDIW 220
VL SMNQ I+V+ + + + C+ YRAPEL F + D+W
Sbjct: 174 VLMDLGSMNQ--ACIHVEGSRQALTLQDWAAQRCTISYRAPEL-FSVQSHCVIDERTDVW 230
Query: 221 SAGCVLAELLLGQ 233
S GCVL ++ G+
Sbjct: 231 SLGCVLYAMMFGE 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 84 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 134
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 135 YLGTKRY 141
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 55/267 (20%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 210
Query: 225 VLAELLLGQ-PLFPGEN--AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
L E+ +G+ P+ G A+ +L++ I V P + + + DF + +P
Sbjct: 211 SLVEMAVGRYPIGSGSGSMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 269
Query: 282 K---------VFHKRMPPEAIDLASRL 299
+ F KR E +D A L
Sbjct: 270 RADLKQLMVHAFIKRSDAEEVDFAGWL 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y + +R+ I + YT Q+ KG +
Sbjct: 81 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQAHAERIDHIKLLQYTSQICKG---ME 131
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 132 YLGTKRY 138
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 81 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 131
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 132 YLGTKRY 138
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 103/292 (35%), Gaps = 74/292 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 134 SLKHCFFSTT------------------------SKDEL--FLNLVMEYVPETMYRVLKH 167
+L F + T ++DE FL +++ V + + H
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 131
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +KL + + + + PE I
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F GE + L I V NY DF
Sbjct: 192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAV--------------NY-DF------ 230
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 328
+ + A D RLL P R T ++ H + +R N R
Sbjct: 231 ----DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVR 278
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 109 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 159
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 160 YLGTKRY 166
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------- 118
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKH--------- 167
RE+Q ++L HP++I L + T +VMEYV E + KH
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 168 ------YSSMN--QRMPLIYVKLYTYQVKGEANISYICSRY------------------- 200
S+++ R +++ L V +A+++ + +
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSP 174
Query: 201 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 241
Y APE+I G +DIWS G +L LL G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 192 SLVEMAVGRYPIPPPDA 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 192 SLVEMAVGRYPIPPPDA 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 82 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 132
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 133 YLGTKRY 139
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 32/153 (20%)
Query: 189 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 248
GE + + Y APE + ++ +D+WS GC++ LL+G+P F
Sbjct: 171 GERKKTLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------ 217
Query: 249 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 308
E C+ Y +IK + + K + P A L ++LQ P+ R
Sbjct: 218 ----------ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARP 260
Query: 309 TALEACAHPFFDELREPNARLP-NGRPFPPLFN 340
T E FF P ARLP PP F+
Sbjct: 261 TINELLNDEFFTSGYIP-ARLPITCLTIPPXFS 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 128
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 129 YLGTKRY 135
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 76 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 126
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 127 YLGTKRY 133
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 96 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 146
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 147 YLGTKRY 153
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 128
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 129 YLGTKRY 135
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 128
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 129 YLGTKRY 135
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 77 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 127
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 128 YLGTKRY 134
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 53/222 (23%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------- 118
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKH--------- 167
RE+Q ++L HP++I L + T +VMEYV E + KH
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 168 ------YSSMN--QRMPLIYVKLYTYQVKGEANISYICSRY------------------- 200
S+++ R +++ L V +A+++ + +
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSP 174
Query: 201 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 241
Y APE+I G +DIWS G +L LL G F E+
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 96 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 146
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 147 YLGTKRY 153
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 161 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 218
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 219 SLVEMAVGRYPIPPPDA 235
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVM-EYVPET----------------- 160
HPN++ S + F + ELF ++V E+ E
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 161 ----MYRVLKHYSSM-NQRMPLIYVKLYTYQVKGEANISYICSRY-----YRAPELIFGA 210
++R LK + + + VKL + + E N S + Y +PE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VLKK 181
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
Y+ +DIW+ G +L LL+G P F E+ +I D+
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---------------KAGAYDY 226
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
P+ W V PEA L +L +P R TA +A P+
Sbjct: 227 PSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEII 249
I +R YR+ E++ GA Y+T DIWS C+ EL G LF GE+ D + II
Sbjct: 246 IQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHII 304
Query: 250 KVLGTPTR 257
++LG+ R
Sbjct: 305 ELLGSIPR 312
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQV-KGEANIS 194
+S ++ L L+MEY+P Y L+ Y +R+ I + YT Q+ KG +
Sbjct: 79 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG---ME 129
Query: 195 YICSRYY 201
Y+ ++ Y
Sbjct: 130 YLGTKRY 136
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVM-EYVPET----------------- 160
HPN++ S + F + ELF ++V E+ E
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 161 ----MYRVLKHYSSM-NQRMPLIYVKLYTYQVKGEANISYICSRY-----YRAPELIFGA 210
++R LK + + + VKL + + E N S + Y +PE +
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VLKK 180
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
Y+ +DIW+ G +L LL+G P F E+ +I D+
Sbjct: 181 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---------------KAGAYDY 225
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
P+ W V PEA L +L +P R TA +A P+
Sbjct: 226 PSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 69/289 (23%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVM-EYVPET----------------- 160
HPN++ S + F + ELF ++V E+ E
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 161 ----MYRVLKHYSSM-NQRMPLIYVKLYTYQVKGEANISYICSRY-----YRAPELIFGA 210
++R LK + + + VKL + + E N S + Y +PE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VLKK 181
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
Y+ +DIW+ G +L LL+G P F E+ +I D+
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---------------KAGAYDY 226
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
P+ W V PEA L +L +P R TA +A P+
Sbjct: 227 PSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C Y AP +I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 192 SLVEMAVGRYPIPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN S++ +R Y +PE + G T Y+ DIWS G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGL 191
Query: 225 VLAELLLGQPLFPGENA 241
L E+ +G+ P +A
Sbjct: 192 SLVEMAVGRYPIPPPDA 208
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLK 136
V+G GSFG V ++ T E A+K + +D ++ +++ ++ L P ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 137 HCFFSTTSKDELFLNLVMEYV--PETMYRVLK----------HYSS-------MNQRMPL 177
H F T + L VMEYV + MY + + Y++ Q +
Sbjct: 87 HSCFQTMDR----LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 178 IY--VKLYTYQVKGEANIS-------------------YICSRYYRAPELIFGATEYTTS 216
IY +KL + E +I + + Y APE+I Y S
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKS 201
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+D W+ G +L E+L GQ F GE+ D+L + I
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 32/153 (20%)
Query: 189 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 248
GE + + Y APE + ++ +D+WS GC++ LL+G+P F
Sbjct: 171 GERKKTLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------ 217
Query: 249 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 308
E C+ Y +IK + + K + P A L ++LQ P+ R
Sbjct: 218 ----------ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARP 260
Query: 309 TALEACAHPFFDELREPNARLP-NGRPFPPLFN 340
T E FF P ARLP PP F+
Sbjct: 261 TINELLNDEFFTSGYIP-ARLPITCLTIPPRFS 292
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 32/153 (20%)
Query: 189 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 248
GE + + Y APE + ++ +D+WS GC++ LL+G+P F
Sbjct: 175 GERKKTLCGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------ 221
Query: 249 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 308
E C+ Y +IK + + K + P A L ++LQ P+ R
Sbjct: 222 ----------ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARP 264
Query: 309 TALEACAHPFFDELREPNARLP-NGRPFPPLFN 340
T E FF P ARLP PP F+
Sbjct: 265 TINELLNDEFFTSGYIP-ARLPITCLTIPPRFS 296
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPN 131
Y+ +G GSFG V A +T + VA+K + + K+ RE+ ++L+ HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ------------------ 173
+I L + T + +V+EY ++ + M +
Sbjct: 71 IIKLYDVITTPTD-----IVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 174 RMPLIYVKLYTYQVKGEANISYICSRY--------------------YRAPELIFGATEY 213
R +++ L + + N++ + + Y APE+I G
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGE 239
+D+WS G VL +L+G+ F E
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCF 139
++G+G FG VF+AK G+T I++V + RE++ + +DH N++ C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCW 74
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEII 249
I +R YR+ E++ G+ Y T DIWS C+ EL G LF GE D + II
Sbjct: 254 IQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 312
Query: 250 KVLGTPTREEIRCMNPNYTDFRFPQ-------IKAHPWHKV--------FHKRMPPEAID 294
++LG R+ I + Y+ F + K PW + + D
Sbjct: 313 ELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 370
Query: 295 LASRLLQYSPSLRCTALEACAHPFFD 320
+L+ P R TA E HP+ +
Sbjct: 371 FLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 48/217 (22%)
Query: 82 ERV--VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVIS 134
ER+ +G G+ G+V + + +G +A K + + R RELQ++ + P ++
Sbjct: 19 ERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 78
Query: 135 LKHCFFSTTS-------KDELFLNLVME---YVPETMY-----RVLKHYSSMNQRMPLIY 179
F+S D L+ V++ +PE + VL+ + + ++ +++
Sbjct: 79 FYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMH 138
Query: 180 ---------------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDI 219
+KL + V G+ AN S++ +R Y APE + G T Y+ DI
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMAPERLQG-THYSVQSDI 196
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 256
WS G L EL +G+ P +A E+ + G P
Sbjct: 197 WSMGLSLVELAVGRYPIPPPDA----KELEAIFGRPV 229
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEII 249
I +R YR+ E++ G+ Y T DIWS C+ EL G LF GE D + II
Sbjct: 238 IQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALII 296
Query: 250 KVLGTPTREEIRCMNPNYTDFRFPQ-------IKAHPWHKV--------FHKRMPPEAID 294
++LG R+ I + Y+ F + K PW + + D
Sbjct: 297 ELLGKVPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 354
Query: 295 LASRLLQYSPSLRCTALEACAHPFFD 320
+L+ P R TA E HP+ +
Sbjct: 355 FLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 181 YIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ET 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 218 SCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 270
Query: 321 ELREPNARLP-NGRPFPPLFN 340
P ARLP PP F+
Sbjct: 271 SGYIP-ARLPITCLTIPPRFS 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 205 YIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ET 241
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 242 SCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 294
Query: 321 ELREPNARLP-NGRPFPPLFN 340
P ARLP PP F+
Sbjct: 295 SGYIP-ARLPITCLTIPPRFS 314
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 53/212 (25%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTY--QVKGEANISYICSRYYRAPELIFGATEYTTSI 217
+YR LK + + + I V + + +VKG + Y APE+I + Y ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-WXLXGTPEYLAPEIIL-SKGYNKAV 219
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 53/212 (25%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTY--QVKGEANISYICSRYYRAPELIFGATEYTTSI 217
+YR LK + + + I V + + +VKG + Y APE+I + Y ++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-WXLAGTPEYLAPEIIL-SKGYNKAV 219
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 54/219 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNV 132
Y+ + +G GSFG K E G IK++ ++R RE+ ++ M HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 133 ISLKHCFFSTTSKDELFLNLVMEY---------------------------------VPE 159
+ + F S L +VM+Y +
Sbjct: 86 VQYRESFEENGS-----LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 160 TMYRVLKHYSSMNQRMPLI---YVKLYTYQVKGEANISYICSR------YYRAPELIFGA 210
R + H +Q + L V+L + + N + +R YY +PE I
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE-ICEN 199
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
Y DIW+ GCVL EL + F + + +++II
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 31/130 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE + ++ +D+WS GC++ LL+G+P F E
Sbjct: 207 YIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF----------------------ET 243
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
C+ Y +IK + + K + P A L ++LQ P+ R T E FF
Sbjct: 244 SCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFT 296
Query: 321 ELREPNARLP 330
P ARLP
Sbjct: 297 SGYIP-ARLP 305
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 51/211 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP------------------------------------E 159
+ F KD L +VMEYV +
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
+YR LK + + + I V + + + + +C APE+I + Y ++D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIIL-SKGYNKAVD 220
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W+ G ++ E+ G P F + + Q+ E I
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF Y+T D+WS G +L E+ LG +PG V++ + + RE
Sbjct: 267 WMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCSRLREG 318
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
+R P Y+ QI WH+ +R P +L +L
Sbjct: 319 MRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 44/205 (21%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++ ++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 130 PNVISL---------KHCFFSTTSKDELFLNLVM--------------EYVPETMY---R 163
PN++ L + S E+F LV + V Y +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 164 VLKHYSSMNQRMPL---IYVKLYTYQVKGEANISYICSRY-----YRAPELIFGATEYTT 215
+ H + + L +K+ + E + Y APEL G
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 216 SIDIWSAGCVLAELLLGQPLFPGEN 240
+D+WS G +L L+ G F G+N
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
Y + V+G+G+ +V A C E VAIK++ ++ + +E+Q M HPN++
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 134 SLKHCFFSTTSKDELFL 150
S + S KDEL+L
Sbjct: 72 SY---YTSFVVKDELWL 85
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 113/290 (38%), Gaps = 66/290 (22%)
Query: 70 NGEPKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYKNRELQLMR 125
+G + +S + E +G G+ IV++ K T + A+K K D++ E+ ++
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 126 LMDHPNVISLKHCFFSTT---------SKDELFLNLV--------------------MEY 156
+ HPN+I LK F + T + ELF +V + Y
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 157 VPET--MYRVLK----HYSSMNQRMPLIYVKL-YTYQVKGEANISYICSR-YYRAPELIF 208
+ E ++R LK Y++ PL + V+ + + +C Y APE++
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 209 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 268
G Y +D+WS G + LL G F E DQ + R + C
Sbjct: 224 GCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------FRRILNC------ 266
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
++ F PW + A DL +L+ P R T +A HP+
Sbjct: 267 EYYF----ISPW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 42/189 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 140 FSTTS-------KDELFLNLVMEY---VPETMY-----RVLKHYSSMNQRMPLIY----- 179
+S D L+ V++ +PE + V+K + + ++ +++
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 180 ----------VKLYTYQVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGC 224
+KL + V G+ AN ++ +R Y +PE + G T Y+ DIWS G
Sbjct: 137 SNILVNSRGEIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQG-THYSVQSDIWSMGL 194
Query: 225 VLAELLLGQ 233
L E+ +G+
Sbjct: 195 SLVEMAVGR 203
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
Y + V+G+G+ +V A C E VAIK++ ++ + +E+Q M HPN++
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 134 SLKHCFFSTTSKDELFL 150
S + S KDEL+L
Sbjct: 77 SY---YTSFVVKDELWL 90
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 102/292 (34%), Gaps = 74/292 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 134 SLKHCFFSTT------------------------SKDEL--FLNLVMEYVPETMYRVLKH 167
+L F + T ++DE FL +++ V + + H
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 152
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +KL + + + + PE I
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F GE + L I V NY DF
Sbjct: 213 ADMWSIGVITYILLSGASPFLGETKQETLTNISAV--------------NY-DF------ 251
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 328
+ + A D RLL P R ++ H + +R N R
Sbjct: 252 ----DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNVR 299
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 33/143 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE++ YT S D W+ GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACA 315
+ +K P + + +R P+A L S+LL P+ R +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 316 HPFFDELREPNARLPNGRPFPPL 338
HP F +L RL G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 75/283 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL-----QDRRYKNRELQL-MRLMDHPNVISLKHC 138
+G G++G+V + + + +G+ +A+K++ Q+++ +L + MR +D P ++
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 139 FFS-----------TTSKDELFLNLV--MEYVPETM-----YRVLKHYSSMNQRMPLIY- 179
F TS D+ + ++ + +PE + ++K ++ ++ +I+
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 180 --------------VKLYTYQVKG------EANISYICSRYYRAPELI---FGATEYTTS 216
VK+ + + G +I C + Y APE I Y+
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC-KPYMAPERINPELNQKGYSVK 193
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
DIWS G + EL + + FP ++ GTP ++ Q+
Sbjct: 194 SDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------LKQVV 227
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
P ++ + E +D S+ L+ + R T E HPFF
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 33/143 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE++ YT S D W+ GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--C---TALEACA 315
+ +K P + + +R P+A L S+LL P+ R C +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 316 HPFFDELREPNARLPNGRPFPPL 338
HP F +L RL G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 198 SRYYRAPELI----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD---QLVEIIK 250
S Y APE++ AT Y D+WS G VL +L G P F G D E+ +
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 251 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 310
V E I+ + D + I + EA DL S+LL R +A
Sbjct: 244 VCQNKLFESIQEGKYEFPDKDWAHISS-------------EAKDLISKLLVRDAKQRLSA 290
Query: 311 LEACAHPF 318
+ HP+
Sbjct: 291 AQVLQHPW 298
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 123/304 (40%), Gaps = 78/304 (25%)
Query: 65 TIGGKNGEPK-QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVL-----QDRRYKN 118
+IG +N E K + + E +G G++G+V + + + +G+ +A+K++ Q+++
Sbjct: 40 SIGNQNFEVKADDLEPIME--LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLL 97
Query: 119 RELQL-MRLMDHPNVISLKHCFFS-----------TTSKDELFLNLV--MEYVPETM--- 161
+L + MR +D P ++ F TS D+ + ++ + +PE +
Sbjct: 98 MDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK 157
Query: 162 --YRVLKHYSSMNQRMPLIY---------------VKLYTYQVKG------EANISYICS 198
++K ++ ++ +I+ VK+ + + G I C
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC- 216
Query: 199 RYYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 255
+ Y APE I Y+ DIWS G + EL + + FP ++ GTP
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------WGTP 263
Query: 256 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 315
++ Q+ P ++ + E +D S+ L+ + R T E
Sbjct: 264 FQQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
Query: 316 HPFF 319
HPFF
Sbjct: 311 HPFF 314
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + D R +E+ ++R + H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVP 158
I K C + E L LVMEYVP
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVP 101
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + D R +E+ ++R + H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVP 158
I K C + E L LVMEYVP
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVP 101
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 55/235 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 F------------STTSKDELFLNL------------------VMEYVPET--MYRVLKH 167
+ + + D + L L + Y+ + ++R LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 168 YSSMNQRMPLIYVKLYTYQVKGEANI----SYICSRYYRAPELIFGATE----YTTSIDI 219
+ + I + + K I S+I + Y+ APE++ T Y D+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMNPNYTDF 270
WS G L E+ +P N + L++I K L P+R + N+ DF
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WSSNFKDF 273
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 57/200 (28%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVL-----QDRRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + Q R RE++++R + H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR------------VLKHYSSMNQRMPLIYV 180
+ K C + E + LVMEYVP R +L + + M ++
Sbjct: 73 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 181 KLYTYQVKGEANISYICSR------------------YYR------------APELIFGA 210
+ Y ++ N+ R YYR APE +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 211 TEYTTSIDIWSAGCVLAELL 230
Y S D+WS G L ELL
Sbjct: 190 KFYYAS-DVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 57/200 (28%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVL-----QDRRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + Q R RE++++R + H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR------------VLKHYSSMNQRMPLIYV 180
+ K C + E + LVMEYVP R +L + + M ++
Sbjct: 74 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 181 KLYTYQVKGEANISYICSR------------------YYR------------APELIFGA 210
+ Y ++ N+ R YYR APE +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 211 TEYTTSIDIWSAGCVLAELL 230
Y S D+WS G L ELL
Sbjct: 191 KFYYAS-DVWSFGVTLYELL 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-----LMRLMDHPNVISLKH 137
RV+ G F V++A+ + +G A+K++L + KNR + + +L HPN++
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF-- 91
Query: 138 CFFSTTSKDE 147
C ++ K+E
Sbjct: 92 CSAASIGKEE 101
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 62/223 (27%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 135 LKHCFFSTTSKDELFLNLVMEYV---------------PETMYRVLKHYSSMN----QRM 175
L CF T S+ L V+EYV PE R S+
Sbjct: 75 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 176 PLIY---------------VKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+IY +KL Y + G+ + + Y APE++ G +Y
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYG 188
Query: 215 TSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 249
S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 55/235 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 F------------STTSKDELFLNL------------------VMEYVPET--MYRVLKH 167
+ + + D + L L + Y+ + ++R LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 168 YSSMNQRMPLIYVKLYTYQVKGEANI----SYICSRYYRAPELIFGATE----YTTSIDI 219
+ + I + + K I S+I + Y+ APE++ T Y D+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMNPNYTDF 270
WS G L E+ +P N + L++I K L P+R + N+ DF
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WSSNFKDF 273
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 64/213 (30%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKN--RELQLMRLMDHPNVI 133
E ++G G FG V++A G+ VA+K D + +N +E +L ++ HPN+I
Sbjct: 12 EEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV-PETMYRVLK--------------------HYSSMN 172
+L+ + L LVME+ + RVL +Y
Sbjct: 70 ALRGVCLKEPN-----LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 173 QRMPLIYVKLYTYQV-------KGE--------------------ANISYICSRYYRAPE 205
+P+I+ L + + G+ +S + + APE
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE 184
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG 238
+I A+ ++ D+WS G +L ELL G+ F G
Sbjct: 185 VI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 51/214 (23%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQR---------M 175
D P ++ + + F + D+L L + + Y + +H +S + R +
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 176 PLIYVKLYTYQVKGEANI-------------------------SYICSRYYRAPELIFGA 210
++ + Y+ ANI + + + Y APE++
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 244
Y +S D +S GC+L +LL G F D+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 51/214 (23%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQR---------M 175
D P ++ + + F + D+L L + + Y + +H +S + R +
Sbjct: 248 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 176 PLIYVKLYTYQVKGEANI-------------------------SYICSRYYRAPELIFGA 210
++ + Y+ ANI + + + Y APE++
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 244
Y +S D +S GC+L +LL G F D+
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 62/223 (27%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 135 LKHCFFSTTSKDELFLNLVMEYV---------------PETMYRVLKHYSSMN----QRM 175
L CF T S+ L V+EYV PE R S+
Sbjct: 71 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 176 PLIY---------------VKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+IY +KL Y + G+ + + Y APE++ G +Y
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYG 184
Query: 215 TSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 249
S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGET---VAIKKV-----LQDRRYKNRELQLM 124
P + + ++RV+G G FG+V+ + ++ + AIK + +Q RE LM
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 125 RLMDHPNVISL 135
R ++HPNV++L
Sbjct: 77 RGLNHPNVLAL 87
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 51/214 (23%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQR---------M 175
D P ++ + + F + D+L L + + Y + +H +S + R +
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 176 PLIYVKLYTYQVKGEANI-------------------------SYICSRYYRAPELIFGA 210
++ + Y+ ANI + + + Y APE++
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 244
Y +S D +S GC+L +LL G F D+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 51/214 (23%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQR---------M 175
D P ++ + + F + D+L L + + Y + +H +S + R +
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 176 PLIYVKLYTYQVKGEANI-------------------------SYICSRYYRAPELIFGA 210
++ + Y+ ANI + + + Y APE++
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 211 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 244
Y +S D +S GC+L +LL G F D+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 62/223 (27%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 135 LKHCFFSTTSKDELFLNLVMEYV---------------PETMYRVLKHYSSMN----QRM 175
L CF T S+ L V+EYV PE R S+
Sbjct: 86 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 176 PLIY---------------VKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+IY +KL Y + G+ + + Y APE++ G +Y
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYG 199
Query: 215 TSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 249
S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 200 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 75/319 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP------------------------------------ETMYRVL 165
T L +VMEY + +R L
Sbjct: 87 PTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 166 KHYSSMNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSIDIW 220
K +++ P +K+ + + + S + + Y APE++ D+W
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S G L +L+G F + I R +N Y + I
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVHIS---- 247
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 340
PE L SR+ P+ R + E H +F L+ A L N F+
Sbjct: 248 ---------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFD 296
Query: 341 FKQELAGASPELINRLIPE 359
+ + G S E I ++I E
Sbjct: 297 -ESDQPGQSIEEIMQIIAE 314
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 61/245 (24%)
Query: 58 TGHIISTTIGGKNGEPK-QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
TG++ TIGG+ + + + + E +G+G+ G V++ + +TG +A+K++ RR
Sbjct: 10 TGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM---RRS 61
Query: 117 KNRELQLMRLMDHPNVIS------LKHCFFSTTSKDELFLNL-VMEYVPETMYR------ 163
N+E LMD V+ + CF + + ++F+ + +M E + +
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPI 121
Query: 164 -----------VLKHYSSMNQRMPLIY---------------VKLYTYQVKGE------A 191
++K + ++ +I+ +KL + + G
Sbjct: 122 PERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK 181
Query: 192 NISYICSRYYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 247
+ S C+ Y APE I +Y D+WS G L EL GQ FP +N
Sbjct: 182 DRSAGCAAYM-APERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEV 238
Query: 248 IIKVL 252
+ KVL
Sbjct: 239 LTKVL 243
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 62/223 (27%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A++ V ++ + ++ ++ +HP ++
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 135 LKHCFFSTTSKDELFLNLVMEYV---------------PETMYRVLKHYSSMN----QRM 175
L CF T S+ L V+EYV PE R S+
Sbjct: 118 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 176 PLIY---------------VKLYTYQV------KGEANISYICSRYYRAPELIFGATEYT 214
+IY +KL Y + G+ ++ + Y APE++ G +Y
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE-DYG 231
Query: 215 TSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 249
S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--MDHPNVISLKHCF 139
E VVG G+FG+V +AK + VAIK++ + K ++L +L ++HPN++ L
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 140 FSTTSKDELFLNLVMEYVP-ETMYRVL 165
+ LVMEY ++Y VL
Sbjct: 72 LNPVC-------LVMEYAEGGSLYNVL 91
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--MDHPNVISLKHCF 139
E VVG G+FG+V +AK + VAIK++ + K ++L +L ++HPN++ L
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 140 FSTTSKDELFLNLVMEYVP-ETMYRVL 165
+ LVMEY ++Y VL
Sbjct: 71 LNPVC-------LVMEYAEGGSLYNVL 90
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQL 123
++ +P + + E +G G+FG V++AK ETG +A KV++ + + E+++
Sbjct: 5 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 61
Query: 124 MRLMDHPNVISLKHCFFST------------TSKDELFLNL-------VMEYVPETMYRV 164
+ DHP ++ L ++ + D + L L ++ V M
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 121
Query: 165 LKHYSSM----------NQRMPLI-YVKLYTYQVKG------EANISYICSRYYRAPELI 207
L S N M L ++L + V + S+I + Y+ APE++
Sbjct: 122 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 208 ----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTR 257
T Y DIWS G L E+ +P N + L++I K L TP++
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 46/211 (21%)
Query: 83 RVVGTGSFGIVFQAK--------CLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVIS 134
+V+G GSFG V A+ ++ + AI K +++ + L++ + HP ++
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 135 LKHCFFSTTSK----------DELFLNLVME----------YVPET------------MY 162
L H F T K ELF +L E Y E +Y
Sbjct: 104 L-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY 162
Query: 163 RVLKHYSSM---NQRMPLIYVKLYTYQVKGEANISYICSR-YYRAPELIFGATEYTTSID 218
R LK + + + L L ++ + S C Y APE + Y ++D
Sbjct: 163 RDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLHKQPYDRTVD 221
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
W G VL E+L G P F N + I+
Sbjct: 222 WWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQL 123
++ +P + + E +G G+FG V++AK ETG +A KV++ + + E+++
Sbjct: 13 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 69
Query: 124 MRLMDHPNVISLKHCFFST------------TSKDELFLNL-------VMEYVPETMYRV 164
+ DHP ++ L ++ + D + L L ++ V M
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 165 LKHYSSM----------NQRMPLI-YVKLYTYQVKG------EANISYICSRYYRAPELI 207
L S N M L ++L + V + S+I + Y+ APE++
Sbjct: 130 LNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 208 ----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTR 257
T Y DIWS G L E+ +P N + L++I K L TP++
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 247
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 75/319 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP------------------------------------ETMYRVL 165
T L +VMEY + +R L
Sbjct: 87 PTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 166 KHYSSMNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSIDIW 220
K +++ P +K+ + + + S + + Y APE++ D+W
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S G L +L+G F + I R +N Y + I
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVHIS---- 247
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 340
PE L SR+ P+ R + E H +F L+ A L N F+
Sbjct: 248 ---------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFD 296
Query: 341 FKQELAGASPELINRLIPE 359
+ + G S E I ++I E
Sbjct: 297 -ESDQPGQSIEEIMQIIAE 314
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 111/298 (37%), Gaps = 82/298 (27%)
Query: 85 VGTGSFGIVFQAKCLE--TGETVAIKKVLQ----DRRYKNRELQLMRLMDHPNVISLKHC 138
+G+G+FG+V +C+E TG K + D+ E+ +M + HP +I+L
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 139 FFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY----------------- 179
F +D+ + L++E++ E R+ M++ + Y
Sbjct: 117 F-----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 180 ------------------VKLYTYQVKGEANISYI-----CSRYYRAPELIFGATEYTTS 216
VK+ + + + N I + + APE++
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DREPVGFY 230
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+W+ G + LL G F GE+ ++ L + RC D+ F +
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-----------RC------DWEFDE-- 271
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD-ELREPNARLPNGR 333
F + PEA D LLQ P R T +A HP+ + +R+P+ R
Sbjct: 272 -----DAF-SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSR 323
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKNRELQLMRLMDHPNVI 133
++ ++G G+ VF+ + +TG+ AIK L+ + RE ++++ ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSS 170
L TT++ ++ L+ME+ P ++Y VL+ S+
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSN 105
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 200 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 249
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 250 --VKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 63/284 (22%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVISL- 135
Y+ + +G GS+ + T A+K + + +R + E++ L+R HPN+I+L
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLK 87
Query: 136 ------KHCFFST-----------TSKDELFLNLVMEYVPETMYRVLKHYSSMN------ 172
KH + T + + F +V T+ + +++ S
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDL 147
Query: 173 QRMPLIYVKL-------------YTYQVKGEANISYI-C-SRYYRAPELIFGATEYTTSI 217
+ ++YV + Q++ E + C + + APE + Y
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLKRQGYDEGC 206
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
DIWS G +L +L G F D EI+ +G+ +F +
Sbjct: 207 DIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG---------------KF-TLSG 249
Query: 278 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
W+ V A DL S++L P R TA + HP+ +
Sbjct: 250 GNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 113/320 (35%), Gaps = 77/320 (24%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG+ + + E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP------------------------------------ETMYRVL 165
T L +VMEY + +R L
Sbjct: 87 PTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 166 KHYSSMNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSI-DI 219
K +++ P +K+ + + + S + + Y APE++ EY + D+
Sbjct: 142 KLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL-KKEYDGKVADV 200
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP 279
WS G L +L+G F + I R +N Y + I
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVHIS--- 247
Query: 280 WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLF 339
PE L SR+ P+ R + E H +F L+ A L N F
Sbjct: 248 ----------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQF 295
Query: 340 NFKQELAGASPELINRLIPE 359
+ + + G S E I ++I E
Sbjct: 296 D-ESDQPGQSIEEIMQIIAE 314
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 254 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 303
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 304 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 256 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 305
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 306 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 55/235 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 F------------STTSKDELFLNL------------------VMEYVPET--MYRVLKH 167
+ + + D + L L + Y+ + ++R LK
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 168 YSSMNQRMPLIYVKLYTYQVKGEANIS----YICSRYYRAPELIFGATE----YTTSIDI 219
+ + I + + K I +I + Y+ APE++ T Y D+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMNPNYTDF 270
WS G L E+ +P N + L++I K L P+R + N+ DF
Sbjct: 224 WSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WSSNFKDF 273
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKNRELQLMRLMDHPNVI 133
++ ++G G+ VF+ + +TG+ AIK L+ + RE ++++ ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLK 166
L TT++ ++ L+ME+ P ++Y VL+
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLE 101
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 247 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 296
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 297 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 249 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 298
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 299 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 206 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 255
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 256 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 204 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 253
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 254 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 200 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 249
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 250 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 195 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 244
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 245 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 195 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 244
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 245 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 185 YQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 243
Y KG+A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 241 YVRKGDARLPL----KWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG----- 290
Query: 244 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 281
V+I + +E R P+YT Q WH
Sbjct: 291 --VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 234 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 284
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 285 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 228 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 278
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 279 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 111/319 (34%), Gaps = 75/319 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP------------------------------------ETMYRVL 165
T L +VMEY + +R L
Sbjct: 87 PTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 166 KHYSSMNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSIDIW 220
K +++ P +K+ + + + + + Y APE++ D+W
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVW 201
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S G L +L+G F + I R +N Y + I
Sbjct: 202 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVHIS---- 247
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 340
PE L SR+ P+ R + E H +F L+ A L N F+
Sbjct: 248 ---------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFD 296
Query: 341 FKQELAGASPELINRLIPE 359
+ + G S E I ++I E
Sbjct: 297 -ESDQPGQSIEEIMQIIAE 314
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 106/283 (37%), Gaps = 63/283 (22%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVISL-- 135
Y+ + +G GS+ + T A+K + + +R + E++ L+R HPN+I+L
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 136 -----KHCFFST-----------TSKDELFLNLVMEYVPETMYRVLKHYSSMN------Q 173
KH + T + + F +V T+ + +++ S +
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 174 RMPLIYVKL-------------YTYQVKGEANISYI-C-SRYYRAPELIFGATEYTTSID 218
++YV + Q++ E + C + + APE + Y D
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLKRQGYDEGCD 207
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH 278
IWS G +L +L G F D EI+ +G+ +F +
Sbjct: 208 IWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG---------------KFT-LSGG 250
Query: 279 PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
W+ V A DL S++L P R TA + HP+ +
Sbjct: 251 NWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 216 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 267
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMD-HPNVIS 134
IS+ + V+G G+ G + + + VA+K++L + + +RE+QL+R D HPNVI
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETM 161
+ T KD F + +E T+
Sbjct: 83 -----YFCTEKDRQFQYIAIELCAATL 104
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 201 YRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
Y +PE G AT+ T DI+S G VL E+L+G+P F GE AV
Sbjct: 178 YFSPEQAKGEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 184 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 234
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 235 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 102/284 (35%), Gaps = 78/284 (27%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT----- 215
+ +++ +P +K+ + + + + + PE + A E
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV--APEIVNYEPLG 195
Query: 216 -SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSN 243
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 216 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 267
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 207 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 258
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWH 280
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 216 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 267
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 207 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 258
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREE 259
+ APE IF YT D+WS G +L E+ LG +PG V+I + +E
Sbjct: 216 WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRLKEG 267
Query: 260 IRCMNPNYTDFRFPQIKAHPWH 281
R P+YT Q WH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 189 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 239
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 240 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 110/319 (34%), Gaps = 75/319 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 142 TTSKDELFLNLVMEYVP------------------------------------ETMYRVL 165
T L +VMEY + +R L
Sbjct: 86 PTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 166 KHYSSMNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSIDIW 220
K +++ P +K+ + + + S + + Y APE++ D+W
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVW 200
Query: 221 SAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 280
S G L +L+G F + I R +N Y + I
Sbjct: 201 SCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVHIS---- 246
Query: 281 HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 340
PE L SR+ P+ R + E H +F L+ A L N F
Sbjct: 247 ---------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFA 295
Query: 341 FKQELAGASPELINRLIPE 359
+ G S E I ++I E
Sbjct: 296 ASDQ-PGQSIEEIMQIIAE 313
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 198 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 248
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 249 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 190 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 240
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 241 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 184 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 234
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 235 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 122/314 (38%), Gaps = 84/314 (26%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK-----KVLQDRRYKNRELQLMRLMDH----P 130
+V+GTG++G VF + + +TG+ A+K ++Q + ++++H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 131 NVISLKHCFFSTT---------SKDELFLNL----------VMEYVPET----------- 160
+++L + F + T + ELF +L V YV E
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 161 -MYRVLKHYSSM---NQRMPLIYVKLYTYQVKGEANISY-ICSRY-YRAPELIFGA-TEY 213
+YR +K + + N + L L V E +Y C Y AP+++ G + +
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 214 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 273
++D WS G ++ ELL G F + + EI +R ++ P +P
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILKSEPP------YP 286
Query: 274 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN-- 326
Q M A DL RLL P R A E H FF ++ +
Sbjct: 287 Q------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLA 334
Query: 327 -ARLPNGRPFPPLF 339
++P PF P+
Sbjct: 335 AKKVPA--PFKPVI 346
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 188 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 238
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 239 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 182 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 232
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 233 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 122/328 (37%), Gaps = 100/328 (30%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G+F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLK--------------HY--------- 168
L T S D + L +V E++ + + ++K HY
Sbjct: 90 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 169 -------------------SSMNQRMPLIYVKLYTYQVK---GEANI---SYICSRYYRA 203
+S P VKL + V GE+ + + + ++ A
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAP---VKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y +D+W G +L LL G F G ++L E I + G M
Sbjct: 202 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK------M 251
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NP W + A DL R+L P+ R T EA HP+ E R
Sbjct: 252 NPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-R 293
Query: 324 EPNA---RLPNGRPFPPLFNFKQELAGA 348
+ A LP FN +++L GA
Sbjct: 294 DRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 183 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 233
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 234 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 22/120 (18%)
Query: 200 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 259
YY APE + G +Y S D+WS G ++ LL G P F + + + +
Sbjct: 182 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTR 232
Query: 260 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
IR + FP + W +V E L LL+ P+ R T E HP+
Sbjct: 233 IR-----MGQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 49/215 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 134 SLKHCFFSTT------------------------SKDEL--FLNLVMEYVPETMYRVLKH 167
+L F + T ++DE FL +++ V + + H
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 138
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +KL + + + + PE I
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 251
D+WS G + LL G F GE + L I V
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 244
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 245 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 101/275 (36%), Gaps = 71/275 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK--------NRELQLMRLMDHP 130
Y+ ++G GS+G V + ET A+K + + + + +E+QL+R + H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV--- 187
NVI L ++ + + +VMEY M +L S +R P+ Y Q+
Sbjct: 67 NVIQLVDVLYNEEKQK---MYMVMEYCVCGMQEMLD--SVPEKRFPVCQAHGYFCQLIDG 121
Query: 188 -----------------------KGEANISYI--------------C-----SRYYRAPE 205
G IS + C S ++ PE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 206 LIFGATEYTT-SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-------LGTPTR 257
+ G ++ +DIWSAG L + G F G+N I K G P
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 258 EEIRCMNPNYTDFRFP--QIKAHPWHKVFHKRMPP 290
+ ++ M RF QI+ H W F K+ PP
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSW---FRKKHPP 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 244
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 245 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 50/194 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 140 FSTTSKDELFLNLVMEY-------------------VPETMYRVLKHYSSMNQRMPL--- 177
T L ++MEY + + +LK ++ +
Sbjct: 90 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 178 -----------IYVKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIW 220
VKL + V G+ + ++ + ++ APE+I + Y + DIW
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIW 203
Query: 221 SAGCVLAELLLGQP 234
S G EL G+P
Sbjct: 204 SLGITAIELARGEP 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 78/284 (27%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT----- 215
+ +++ +P +K+ + + + + + PE F A E
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPEIVNYEPLG 195
Query: 216 -SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSN 243
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 78/296 (26%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVIS 134
T Y + +G GS+ + + T A+K + + +R E++ L+R HPN+I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVL--KHYS---------SMNQRMPLIYVK 181
LK + D ++ +V E + E + ++L K +S ++ + + ++ +
Sbjct: 81 LKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 182 LYTYQVKGEANISY-----------IC--------------------SRYYRAPELIFGA 210
++ +NI Y IC + + APE +
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLER 194
Query: 211 TEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 269
Y + DIWS G +L +L G P G + D EI+ +G+
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSG-------------- 238
Query: 270 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF---FDEL 322
+F + W+ V A DL S++L P R TA HP+ +D+L
Sbjct: 239 -KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQL 287
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 78/284 (27%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT----- 215
+ +++ +P +K+ + + + + + PE F A E
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPEIVNYEPLG 195
Query: 216 -SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSN 243
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 76/283 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + HPN+I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 135 LKHCFFSTT---------SKDEL-----------------FLNLVMEYVPETMYRVLKHY 168
L + + T S EL F+ +++ V + + H+
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 169 S-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT------ 215
+++ +P+ ++KL + + E + PE F A E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGL 197
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI 275
D+WS G + LL G F G+ + L I V
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITAV------------------------ 233
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
++ + + F + A D +LL R T EA HP+
Sbjct: 234 -SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP 158
N++ L + +VME+VP
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVP 104
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 61/274 (22%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + T E VA+K + + RE+ R + HPN++ K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 142 TT------------------------SKDE--LFLNLVMEYVP-----ETMYRVLKHYSS 170
T S+DE F ++ V + +R LK ++
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 171 MNQRMPLIYVKLYTYQVKGEANI-----SYICSRYYRAPELIFGATEYTTSI-DIWSAGC 224
+ P +K+ + + + S + + Y APE++ EY I D+WS G
Sbjct: 148 LLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYDGKIADVWSCGV 206
Query: 225 VLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR--EEIRCMNPN-------------YT 268
L +L+G P E D I ++L ++IR ++P T
Sbjct: 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-ISPECCHLISRIFVADPAT 265
Query: 269 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY 302
P+IK H W F K +P + ++ ++ Q+
Sbjct: 266 RISIPEIKTHSW---FLKNLPADLMNESNTGSQF 296
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP 158
N++ L + +VME+VP
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVP 104
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 108/290 (37%), Gaps = 86/290 (29%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNV 132
Y +GTG F V A + TGE VAIK + ++ R K E++ ++ + H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT-EIEALKNLRHQHI 70
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVP---------------ETMYRVLKHYSSMNQRMPL 177
L H + +++F+ V+EY P E RV+ + + +
Sbjct: 71 CQLYHVL---ETANKIFM--VLEYCPGGELFDYIISQDRLSEEETRVV--FRQIVSAVAY 123
Query: 178 IYVKLYTYQVKGEANISY------------ICSR----------------YYRAPELIFG 209
++ + Y ++ N+ + +C++ Y APELI G
Sbjct: 124 VHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 269
+ + D+WS G +L L+ G F +N + +I++
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR-----------------GK 226
Query: 270 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
+ P K + P +I L ++LQ P R + HP+
Sbjct: 227 YDVP------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP 158
N++ L + +VME+VP
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVP 104
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------ELQLMRLMDHPNVISLKHC 138
+G GSFG V +A+ G VA+K +++ + R E+ +M+ + HPN++
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 139 FFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQ 173
F L++V EY+ ++YR+L + Q
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------ELQLMRLMDHPNVISLKHC 138
+G GSFG V +A+ G VA+K +++ + R E+ +M+ + HPN++
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 139 FFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQ 173
F L++V EY+ ++YR+L + Q
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 59/228 (25%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV-------------PETMYRV 164
RE Q ++HP ++++ + T L +VMEYV P T R
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LKHYSSMNQRMPLIYVKLYTYQVKGEANI------------------------------S 194
++ + Q + + ++ ANI +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 179 VIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 50/194 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 140 FSTTSKDELFLNLVMEY-------------------VPETMYRVLKHYSSMNQRMPL--- 177
T L ++MEY + + +LK ++ +
Sbjct: 75 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 178 -----------IYVKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIW 220
VKL + V G+ + ++ + ++ APE+I + Y + DIW
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIW 188
Query: 221 SAGCVLAELLLGQP 234
S G EL G+P
Sbjct: 189 SLGITAIELARGEP 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 74/282 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPEL----IFGATEYTTS 216
+ +++ +P +K+ + + + + + PE I
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNTS 245
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 246 AL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 113/291 (38%), Gaps = 70/291 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNL----------VMEYVPETMYRVLKHYSS-------- 170
++++ F S ELF + + + M V+ +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 171 -----MNQRMPLI-----YVKLYTYQVKGEANISYICSRY-YRAPELIFGATEYTTSIDI 219
+++R L ++ Y + E ++ +C Y APEL+ + +D+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 220 WSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP 279
WS G VL +L G+ P + D E Y+D++ + +P
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLNP 229
Query: 280 WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 330
W K++ + L ++L +PS R T + ++++ + A+ P
Sbjct: 230 W-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 50/194 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 140 FSTTSKDELFLNLVMEY-------------------VPETMYRVLKHYSSMNQRMPL--- 177
T L ++MEY + + +LK ++ +
Sbjct: 75 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 178 -----------IYVKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIW 220
VKL + V G+ + ++ + ++ APE+I + Y + DIW
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIW 188
Query: 221 SAGCVLAELLLGQP 234
S G EL G+P
Sbjct: 189 SLGITAIELARGEP 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 102/284 (35%), Gaps = 78/284 (27%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPELIFGATEYTT----- 215
+ +++ +P +K+ + + + + + PE F A E
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE--FVAPEIVNYEPLG 195
Query: 216 -SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 274
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSN 243
Query: 275 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 50/194 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 140 FSTTSKDELFLNLVMEY-------------------VPETMYRVLKHYSSMNQRMPL--- 177
T L ++MEY + + +LK ++ +
Sbjct: 95 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 178 -----------IYVKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIW 220
VKL + V G+ + ++ + ++ APE+I + Y + DIW
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIW 208
Query: 221 SAGCVLAELLLGQP 234
S G EL G+P
Sbjct: 209 SLGITAIELARGEP 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 59/228 (25%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV-------------PETMYRV 164
RE Q ++HP ++++ + T L +VMEYV P T R
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LKHYSSMNQRMPLIYVKLYTYQVKGEANI------------------------------S 194
++ + Q + + ++ ANI +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 179 VIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 265
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 266 KPLKKGAKRP 275
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 120/328 (36%), Gaps = 100/328 (30%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 91
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP------ETMYR----------VLKHY--------- 168
L T S D + L +V E++ E + R V HY
Sbjct: 92 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 169 -------------------SSMNQRMPLIYVKLYTYQVK---GEANI---SYICSRYYRA 203
+S P VKL + V GE+ + + + ++ A
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAP---VKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y +D+W G +L LL G F G ++L E I + G M
Sbjct: 204 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK------M 253
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NP W + A DL R+L P+ R T EA HP+ E R
Sbjct: 254 NPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-R 295
Query: 324 EPNA---RLPNGRPFPPLFNFKQELAGA 348
+ A LP FN +++L GA
Sbjct: 296 DRYAYKIHLPETVEQLRKFNARRKLKGA 323
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 215
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 216 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 265 KPLKKGAKRP 274
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 320
Y+D++ + +PW K++ + L ++L +PS R T + +++
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266
Query: 321 ELREPNARLP 330
+ + A+ P
Sbjct: 267 KPLKKGAKRP 276
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 121/328 (36%), Gaps = 100/328 (30%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLK--------------HY--------- 168
L T S D + L +V E++ + + ++K HY
Sbjct: 90 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 169 -------------------SSMNQRMPLIYVKLYTYQVK---GEANI---SYICSRYYRA 203
+S P VKL + V GE+ + + + ++ A
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAP---VKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 204 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 263
PE++ Y +D+W G +L LL G F G ++L E I + G M
Sbjct: 202 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK------M 251
Query: 264 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 323
NP W + A DL R+L P+ R T EA HP+ E R
Sbjct: 252 NPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-R 293
Query: 324 EPNA---RLPNGRPFPPLFNFKQELAGA 348
+ A LP FN +++L GA
Sbjct: 294 DRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 59/228 (25%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV-------------PETMYRV 164
RE Q ++HP ++++ + T L +VMEYV P T R
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LKHYSSMNQRMPLIYVKLYTYQVKGEANI------------------------------S 194
++ + Q + + ++ ANI +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 179 VIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 107/286 (37%), Gaps = 67/286 (23%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL----------MRLMD- 128
+ +V+G G G V Q T E A+K LQD RE++L +R++D
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-XLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 129 HPNVISLKHCF------------FSTTSK--DELFLNLVMEYVPETMYRVLKHYSSMN-- 172
+ N+ + + C FS D+ F + +++ +++ S+N
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 173 ------------QRMPLIYVKLYTYQVKGEA----NISYIC-SRYYRAPELIFGATEYTT 215
+ P +KL + E +++ C + YY APE + G +Y
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VLGPEKYDK 242
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI 275
S D WS G + LL G P F + + + + IR + FP
Sbjct: 243 SCDXWSLGVIXYILLCGYPPFYSNHGL--------AISPGXKTRIR-----XGQYEFPNP 289
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 321
+ W +V E L LL+ P+ R T E HP+ +
Sbjct: 290 E---WSEVSE-----EVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 242
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQV 187
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT +V
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEV 182
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQV 187
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT +V
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEV 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 56/233 (24%)
Query: 88 GSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCFF-- 140
G FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F+
Sbjct: 21 GDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 141 ----------STTSKDELFLNLVMEYVPETMYRVLKH-YSSMN--QRMPLIY-------- 179
+ + D + L L + V K ++N +I+
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 180 -------VKLYTYQVKG-------EANISYICSRYYRAPELIFGATE----YTTSIDIWS 221
+KL + V + S+I + Y+ APE++ T Y D+WS
Sbjct: 140 LFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 199
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMNPNYTDF 270
G L E+ +P N + L++I K L P+R + N+ DF
Sbjct: 200 LGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WSSNFKDF 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDRRYK-----NRELQ 122
P+ I Y+ R +G G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 123 LMRLMDHPNVISL 135
LM D+PN++ L
Sbjct: 103 LMAEFDNPNIVKL 115
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 72/284 (25%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKN--RELQLMRLMDHPNVISL 135
R +G GSFG V + +T + A+K K ++ +N +ELQ+M+ ++HP +++L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI----------------- 178
++S ++++F+ + + + Y + ++ + + L
Sbjct: 81 ---WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRII 137
Query: 179 ---------------YVKLYTYQVKG----EANISYIC-SRYYRAPELIFG--ATEYTTS 216
+V + + + E I+ + ++ Y APE+ Y+ +
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP--------TREEI----RCMN 264
+D WS G ELL G+ + ++ EI+ T ++E + + +
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEMVSLLKKLLE 256
Query: 265 PNYTDFRFPQ---IKAHP------WHKVFHKRMPPEAIDLASRL 299
PN D RF Q ++ P W VF KR+ P I RL
Sbjct: 257 PN-PDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGRL 299
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 217
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 218 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET-----VAIKKV----LQDRRYKNRELQLMRLMDHPNV 132
+R +G G+FG VF A+C T VA+K + L R+ RE +L+ + H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEAN 192
+ F D L +V EY+ + L + + +I V Q KGE
Sbjct: 80 VK-----FYGVCGDGDPLIMVFEYMK---HGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 193 IS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL 231
+S +I S+ A +++ A+++ D+ + C++ LL
Sbjct: 132 LSQMLHIASQI--ASGMVYLASQHFVHRDLATRNCLVGANLL 171
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------- 216
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 309
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 ------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 59/226 (26%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV-------------PETMYRV 164
RE Q ++HP ++++ + T L +VMEYV P T R
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LKHYSSMNQRMPLIYVKLYTYQVKGEANI------------------------------S 194
++ + Q + + ++ ANI +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
I + Y +PE G + S D++S GCVL E+L G+P F G++
Sbjct: 179 VIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQV 187
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT +V
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEV 182
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 75/283 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL-----QDRRYKNRELQL-MRLMDHPNVISLKHC 138
+G G++G+V + + + +G+ A+K++ Q+++ +L + R +D P ++
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 139 FF-----------STTSKDELFLNLV--MEYVPETM-----YRVLKHYSSMNQRMPLIY- 179
F TS D+ + ++ + +PE + ++K ++ ++ +I+
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 161
Query: 180 --------------VKLYTYQVKG------EANISYICSRYYRAPELI---FGATEYTTS 216
VK + + G +I C + Y APE I Y+
Sbjct: 162 DVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC-KPYXAPERINPELNQKGYSVK 220
Query: 217 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 276
DIWS G EL + + FP ++ GTP ++ Q+
Sbjct: 221 SDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------------LKQVV 254
Query: 277 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 319
P ++ + E +D S+ L+ + R T E HPFF
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 90/340 (26%)
Query: 84 VVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISL 135
V+G G V A+ TGE V ++++ + + EL + +L +HPN++
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 136 KHCFFST-------------TSKDEL---FLN----LVMEYVPETMYRVLKH-------Y 168
+ F + ++KD + F++ L + Y+ + + + L + +
Sbjct: 92 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVH 151
Query: 169 SSMNQRMPLIYVKLYTYQVKGEANISYICS-----------RY------YRAPELIFGAT 211
S+ LI V Y +N+S I +Y + +PE++
Sbjct: 152 RSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL 211
Query: 212 E-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT---------------- 254
+ Y DI+S G EL G F A L+E K+ GT
Sbjct: 212 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLNGTVPCLLDTSTIPAEELT 269
Query: 255 --PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 304
P+R + + P ++ P +HP+H+ F P + LQ +P
Sbjct: 270 MSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVEQCLQRNP 322
Query: 305 SLRCTALEACAHPFFDEL-REPNARLPN-GRPFPPLFNFK 342
R +A H FF ++ R + LP RP P+ NF+
Sbjct: 323 DARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 362
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 90/340 (26%)
Query: 84 VVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISL 135
V+G G V A+ TGE V ++++ + + EL + +L +HPN++
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 136 KHCFFST-------------TSKDEL---FLN----LVMEYVPETMYRVLKH-------Y 168
+ F + ++KD + F++ L + Y+ + + + L + +
Sbjct: 76 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVH 135
Query: 169 SSMNQRMPLIYVKLYTYQVKGEANISYICS-----------RY------YRAPELIFGAT 211
S+ LI V Y +N+S I +Y + +PE++
Sbjct: 136 RSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL 195
Query: 212 E-YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT---------------- 254
+ Y DI+S G EL G F A L+E K+ GT
Sbjct: 196 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLNGTVPCLLDTSTIPAEELT 253
Query: 255 --PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 304
P+R + + P ++ P +HP+H+ F P + LQ +P
Sbjct: 254 MSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVEQCLQRNP 306
Query: 305 SLRCTALEACAHPFFDEL-REPNARLPN-GRPFPPLFNFK 342
R +A H FF ++ R + LP RP P+ NF+
Sbjct: 307 DARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 346
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 282
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 283 PLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 283
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 284 PLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 323
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 324 PLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 256
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 257 PLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 265 PLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 265 PLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 259
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 260 PLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 265 PLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 262
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 263 PLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 263
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 264 PLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 261
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 262 PLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 263
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 264 PLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 269
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 270 PLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 265
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 266 PLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 264
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 265 PLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 265
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 266 PLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 212 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 270
++TT D+WS G +L EL+ G P +P N D V ++ + R + P Y
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QGRRLLQPEYCPD 262
Query: 271 RFPQIKAHPWHKVFHKRMPPEAIDLASRL 299
++ WH M P +L SR+
Sbjct: 263 PLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 50/194 (25%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG V++ T E VAIK + + +E+ ++ D P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 140 FSTTSKDELFLNLVMEY-------------------VPETMYRVLKHYSSMNQRMPLIY- 179
+T L ++MEY + + +LK ++ +
Sbjct: 87 LKSTK-----LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 180 -------------VKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIW 220
VKL + V G+ + ++ + ++ APE+I + Y DIW
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDFKADIW 200
Query: 221 SAGCVLAELLLGQP 234
S G EL G+P
Sbjct: 201 SLGITAIELAKGEP 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 116/308 (37%), Gaps = 74/308 (24%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKN------ 118
GE Q S M+ +G+G+FG V+ A E + V +K KVL+D ++
Sbjct: 19 EGEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76
Query: 119 -RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEY--------------------- 156
E+ ++ ++H N+I + F +++ F LVME
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF-----ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPL 131
Query: 157 ----------------VPETMYRVLKHYS---SMNQRMPLIYVKLYTYQVKGEANISYIC 197
+ + ++R +K + + + + LI Y +G+ ++
Sbjct: 132 ASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCG 191
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVD-----------QL 245
+ Y APE++ G +++WS G L L+ + P E V+ +L
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKEL 251
Query: 246 VEIIKVLGTPTREEIRCMNPNYTDFRFPQ---IKAHPWHKVFHKRMPPEAIDLASRLLQY 302
+ ++ L P E + TD Q + + W +VF P + A+ L
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMG 311
Query: 303 SPSLRCTA 310
+ SL A
Sbjct: 312 NRSLSDVA 319
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 112/296 (37%), Gaps = 78/296 (26%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVIS 134
T Y + +G GS+ + + T A+K + + +R E++ L+R HPN+I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVL--KHYS---------SMNQRMPLIYVK 181
LK + D ++ +V E E + ++L K +S ++ + + ++ +
Sbjct: 81 LKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 182 LYTYQVKGEANISY-----------IC--------------------SRYYRAPELIFGA 210
++ +NI Y IC + + APE +
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE-VLER 194
Query: 211 TEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 269
Y + DIWS G +L L G P G + D EI+ +G+
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILARIGSG-------------- 238
Query: 270 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF---FDEL 322
+F + W+ V A DL S+ L P R TA HP+ +D+L
Sbjct: 239 -KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQL 287
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 53/203 (26%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK-NRELQLMRLMDHPNVISLKHCFF 140
+VG G++G V++ + ++TG+ AIK V D + +E+ +++ H I+ + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 141 STTS----KDELFL--------------------NLVMEYVPETMYRVLKHYSSMNQRMP 176
+ D+L+L L E++ +L+ S ++Q
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV 150
Query: 177 L--------------IYVKLYTYQVKGEAN------ISYICSRYYRAPELIF-----GAT 211
+ VKL + V + + ++I + Y+ APE+I AT
Sbjct: 151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 212 EYTTSIDIWSAGCVLAELLLGQP 234
Y D+WS G E+ G P
Sbjct: 211 -YDFKSDLWSLGITAIEMAEGAP 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 198 SRYYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
S Y APE++ +E Y D+WS G +L LL G P F G D + +
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD--RGEA 241
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
P + + + + FP W + A DL S+LL R +A +
Sbjct: 242 CPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRLSAAQV 293
Query: 314 CAHPF 318
HP+
Sbjct: 294 LQHPW 298
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 198 SRYYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 253
S Y APE++ +E Y D+WS G +L LL G P F G D + +
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD--RGEA 241
Query: 254 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 313
P + + + + FP W + A DL S+LL R +A +
Sbjct: 242 CPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRLSAAQV 293
Query: 314 CAHPF 318
HP+
Sbjct: 294 LQHPW 298
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNRELQ------LMRLMDHPNVI 133
+V+G+G+FG V++ + GETV I K+L + ++ +M MDHP+++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L S T + LV + +P
Sbjct: 104 RLLGVCLSPT------IQLVTQLMP 122
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + + + A+K + + D + E +M + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQV 187
V+ L C F +D+ +L +VMEY+P + ++ +Y +P + K YT +V
Sbjct: 136 WVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEV 183
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 103/283 (36%), Gaps = 76/283 (26%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTT---------SKDELF------LNLVMEYVPETMYRVLK-----------H 167
+L + + T + ELF +L E E + ++L H
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 168 YS-------SMNQRMPLIYVKLYTYQVK-----GEANISYICSRYYRAPELIFGATEYTT 215
+ +++ +P +K+ + + G + + + APE++
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV-NYEPLGL 196
Query: 216 SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI 275
D+WS G + LL G F G+ + L + +N + D F
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNYEFEDEYFSNT 244
Query: 276 KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 318
A A D RLL P R T ++ HP+
Sbjct: 245 SAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 50/211 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVI---- 133
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 75
Query: 134 -----------------SLKHCFFSTTSKDEL--FLNLVMEYVPETMYRVLKHYSSMNQR 174
SL H ++ +K E+ +++ + Y K + +
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 135
Query: 175 MPLIYVKLYTYQVKGEANISYICSRY--------------YRAPELIF--GATEYTTSID 218
I++ G+ ++ + SR+ + APE+I + Y+ D
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 219 IWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+++ G VL EL+ GQ + N DQ++E++
Sbjct: 196 VYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNRELQ------LMRLMDHPNVI 133
+V+G+G+FG V++ + GETV I K+L + ++ +M MDHP+++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L S T + LV + +P
Sbjct: 81 RLLGVCLSPT------IQLVTQLMP 99
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 180 VKLYTYQVKGEANIS------YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 233
VKL + V G+ + ++ + ++ APE+I + Y + DIWS G EL G+
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKADIWSLGITAIELAKGE 217
Query: 234 P 234
P
Sbjct: 218 P 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
ERV+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 134 SLKHCFFSTTSKDELFLNLVME 155
L+ T SK + + ME
Sbjct: 87 HLEGVV--TKSKPVMIVTEYME 106
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 240
+ + YY APE F + T DI++ CVL E L G P + G+
Sbjct: 196 VGTLYYXAPER-FSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 201 YRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+ APE+I + Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
ERV+G G FG V + G+ VAIK + K R E +M DHPNV+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 134 SLK 136
L+
Sbjct: 108 HLE 110
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 85 RLLGICLTST------VQLIMQLMP 103
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 221 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 275
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 276 SKFYKLVK 283
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 201 YRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 249
+ APE+I + Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 219 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 274 SKFYKLVK 281
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 207 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 261
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 262 SKFYKLVK 269
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 219 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 274 SKFYKLVK 281
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIK 108
+ Y R +G GSFG++F+ L + VAIK
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 40
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 215 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 269
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 270 SKFYKLVK 277
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 82 RLLGICLTST------VQLIMQLMP 100
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIK 108
+ Y R +G GSFG++F+ L + VAIK
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 41
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 84 RLLGICLTST------VQLIMQLMP 102
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 83 RLLGICLTST------VQLIMQLMP 101
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 83 RLLGICLTST------VQLIMQLMP 101
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 82 RLLGICLTST------VQLIMQLMP 100
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 85 RLLGICLTST------VQLIMQLMP 103
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 83 RLLGICLTST------VQLIMQLMP 101
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 184 TYQVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 242
Y VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 213 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 267
Query: 243 DQLVEIIK 250
+ +++K
Sbjct: 268 SKFYKLVK 275
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
L ++T + L+M+ +P
Sbjct: 81 RLLGICLTST------VQLIMQLMP 99
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
+L + +L L +EY P
Sbjct: 90 NL-----LGACEHRGYLYLAIEYAP 109
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 236
+++ + YY +PE + Y DIWS GC+L EL P F
Sbjct: 175 TFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
+L + +L L +EY P
Sbjct: 80 NL-----LGACEHRGYLYLAIEYAP 99
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP 158
+L + +L L +EY P
Sbjct: 87 NL-----LGACEHRGYLYLAIEYAP 106
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK 108
EP+ + R +G+GSFG ++ ++T E VAIK
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM---------DHPNVI 133
+ +G G FG+VF+AK AIK++ R NREL ++M +HP ++
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 134 SLKHCFFST 142
+ + T
Sbjct: 68 RYFNAWLET 76
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 230
+ ++ Y +PE I G Y+ +DI+S G +L ELL
Sbjct: 237 VGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 194 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 236
+++ + YY +PE + Y DIWS GC+L EL P F
Sbjct: 175 AFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 71 GEPKQTIS---YMAERVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE---- 120
G P+ I+ + R++G G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 121 -LQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLI 178
+M+ +DHP+++ L +E ++ME P Y L HY N+ + ++
Sbjct: 75 EAVIMKNLDHPHIVKLIGII------EEEPTWIIMELYP---YGELGHYLERNKNSLKVL 125
Query: 179 YVKLYTYQV 187
+ LY+ Q+
Sbjct: 126 TLVLYSLQI 134
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM---------DHPNVI 133
+ +G G FG+VF+AK AIK++ R NREL ++M +HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 134 SLKHCFFSTTSKDEL 148
+ + + ++L
Sbjct: 67 RYFNAWLEKNTTEKL 81
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 196 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 230
+ ++ Y +PE I G + Y+ +DI+S G +L ELL
Sbjct: 191 VGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 195 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 236
++ + YY +PE + Y DIWS GC+L EL P F
Sbjct: 176 FVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 134 SLK 136
L+
Sbjct: 94 HLE 96
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 134 SLK 136
L+
Sbjct: 73 HLE 75
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 134 SLK 136
L+
Sbjct: 79 HLE 81
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 18/114 (15%)
Query: 83 RVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVIS 134
R++G G FG V++ GE VA+K +D N+E +M+ +DHP+++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLIYVKLYTYQV 187
L ++ + ++ME P Y L HY N+ + ++ + LY+ Q+
Sbjct: 78 L----IGIIEEEPTW--IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQI 122
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V G+ VAIK + K R E +M DHPNVI
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 134 SLKHCFFSTT 143
L+ +T
Sbjct: 98 HLEGVVTKST 107
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V G+ VAIK + K R E +M DHPNVI
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 134 SLKHCFFSTT 143
L+ +T
Sbjct: 72 HLEGVVTKST 81
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 18/114 (15%)
Query: 83 RVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVIS 134
R++G G FG V++ GE VA+K +D N+E +M+ +DHP+++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLIYVKLYTYQV 187
L ++ + ++ME P Y L HY N+ + ++ + LY+ Q+
Sbjct: 74 L----IGIIEEEPTW--IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQI 118
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 77 ISYMA-ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLM 127
+SY+ E V+G G FG V + + G+ VAIK + + RR E +M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVME 155
+HPN+I L+ T S + L ME
Sbjct: 75 EHPNIIRLEGVV--TNSMPVMILTEFME 100
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 77 ISYMA-ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLM 127
+SY+ E V+G G FG V + + G+ VAIK + + RR E +M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVME 155
+HPN+I L+ T S + L ME
Sbjct: 73 EHPNIIRLEGVV--TNSMPVMILTEFME 98
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK 108
Y R +G+GSFG ++ + +GE VAIK
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIK 40
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 87 RLLGICLTST 96
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 84 RLLGICLTST 93
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 84 RLLGICLTST 93
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 81 RLLGICLTST 90
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 84 RLLGICLTST 93
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 83 RLLGICLTST 92
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 88 RLLGICLTST 97
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 81 RLLGICLTST 90
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 106 RLLGICLTST 115
>pdb|1QNL|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Butyramide
Length = 385
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 271
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 321
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|1QO0|A Chain A, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1QO0|B Chain B, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1PEA|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Acetamide
Length = 385
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 222 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 271
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 272 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 321
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 88 RLLGICLTST 97
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 81 RLLGICLTST 90
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 83 RLLGICLTST 92
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 78 RLLGICLTST 87
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 91 RLLGICLTST 100
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMDHPNVISL 135
+G G FG V++ + TVA+K + +D +E +M+ + HPN++ L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM-------DHPNVISL 135
+V+G G+F V K +TG+ A+K + + K E+ R D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQV 187
F +DE +L LVMEY +L S +R+P + Y ++
Sbjct: 127 HFAF-----QDENYLYLVMEYY--VGGDLLTLLSKFGERIPAEMARFYLAEI 171
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 75 RLLGICLTST 84
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 207
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXME 129
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 28/137 (20%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 202 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 245
Query: 278 HPWHKVFHKRMPPEAI-DLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFP 336
P + + D+ L+ P R + E AHP+ P ++ G
Sbjct: 246 -----------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 294
Query: 337 PLFNFKQELAGASPELI 353
+ Q + SP I
Sbjct: 295 MKYVLGQLVGLNSPNSI 311
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 81 RLLGICLTST 90
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXME 129
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 206
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 153
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 213
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 274 IRWCLALRPSDRPTFEEIQNHPW 296
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 127
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 88
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 73
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 73
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 74
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------ 121
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 122 ---------------QLMRLMD---HPNVISL--------KHCFFSTTSKDEL------- 148
++RL+D P+ L + F T + L
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 149 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY----VKLYTYQ----VKGEANISYICSRY 200
F V+E V + H ++ + + +KL + +K + +R
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 193
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREE 259
Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 253
Query: 260 IR-CMNPNYTDF-RFPQIKAHPW 280
IR C+ +D F +I+ HPW
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 74
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 88
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 93
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 20/102 (19%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 155
R E +M DHPN+I L+ T SK + + ME
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYME 129
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 60
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK 108
Y R +G+GSFG ++ + GE VAIK
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 61
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 61
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR 114
GK EP ++ Y ++G+G FG V+ + VAIK V +DR
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 61
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK 108
Y R +G+GSFG ++ + GE VAIK
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 264
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNG 332
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 265 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 32/139 (23%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 292
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 293 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTT 339
Query: 335 FPPLFNFKQELAGASPELI 353
+ Q + SP I
Sbjct: 340 EEMKYVLGQLVGLNSPNSI 358
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 32/139 (23%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 292
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 293 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTT 339
Query: 335 FPPLFNFKQELAGASPELI 353
+ Q + SP I
Sbjct: 340 EEMKYVLGQLVGLNSPNSI 358
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I + + R N+E+ +M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 134 SLKHCFFSTT 143
L ++T
Sbjct: 115 RLLGICLTST 124
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 134 SLKHCFFSTTSKDELFLNLVME 155
L+ T SK + + ME
Sbjct: 81 RLEGVV--TKSKPVMIVTEXME 100
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPT 256
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC 236
Query: 257 REEIR-CMNPNYTDF-RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 312
+ IR C+ +D F +I+ HPW + +P E ++ L PS + ALE
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ--DVLLPQETAEIHLHSLSPGPS-KAAALE 291
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 264
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNG 332
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 265 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 32/139 (23%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 205 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 248
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 334
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 249 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTT 295
Query: 335 FPPLFNFKQELAGASPELI 353
+ Q + SP I
Sbjct: 296 EEMKYVLGQLVGLNSPNSI 314
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 134 SLKHCFFSTTSKDELFLNLVME 155
L+ T SK + + ME
Sbjct: 98 RLEGVV--TKSKPVMIVTEYME 117
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 260
Y APE I TT+ D+W+ G + LL F GE+ + + I +V + E
Sbjct: 199 YLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 261 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 301
++ TDF + +P ++ P I L+ LQ
Sbjct: 258 SSVSQLATDFIQSLLVKNP------EKRPTAEICLSHSWLQ 292
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 134 SLKHCFFSTTSKDELFLNLVME 155
L+ T SK + + ME
Sbjct: 81 RLEGVV--TKSKPVMIVTEYME 100
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 201 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 244
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNG 332
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 245 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 238
+ APE +F YT D+WS G +L E+ LG +PG
Sbjct: 240 WMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 66/205 (32%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---VKLYTYQVKG---- 189
FS+ D L LV Y+P +L S ++ PL + K+ G
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 190 -----------EANI------------------------SYICSRY-----YRAPELIFG 209
ANI + + SR Y APE + G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG 209
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQP 234
E T DI+S G VL E++ G P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---VKLYTYQVKG---- 189
FS+ D L LV Y+P +L S ++ PL + K+ G
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 190 -----------EANI-----------------------------SYICSRYYRAPELIFG 209
ANI + + Y APE + G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQP 234
E T DI+S G VL E++ G P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY---VKLYTYQVKG---- 189
FS+ D L LV Y+P +L S ++ PL + K+ G
Sbjct: 90 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 190 -----------EANI-----------------------------SYICSRYYRAPELIFG 209
ANI + + Y APE + G
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 210 ATEYTTSIDIWSAGCVLAELLLGQP 234
E T DI+S G VL E++ G P
Sbjct: 204 --EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 32/118 (27%)
Query: 218 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 277
D+WS GC+L + G+ P + ++Q+ ++ ++ +PN+ + FP I
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-----------DPNH-EIEFPDI-- 292
Query: 278 HPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCTALEACAHPFFDELREPNARLPNG 332
PE DL L L+ P R + E AHP+ P ++ G
Sbjct: 293 ------------PEK-DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 82 ERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
+R +G G+FG VF A+C E + + K L+D R+ +RE +L+ + H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 133 ISL 135
+
Sbjct: 78 VKF 80
>pdb|3H5D|A Chain A, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|B Chain B, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|C Chain C, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|D Chain D, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
Length = 311
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 123 LMRLMDHPNVISLKHC 138
++RL DHPN+I +K C
Sbjct: 155 MLRLADHPNIIGVKEC 170
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 136 KHCFFSTTSKDELFLNLVMEYV 157
FF ++ L +V EY+
Sbjct: 85 ---FFGVCTEGRPLL-MVFEYM 102
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 136 KHCFFSTTSKDELFLNLVMEYV 157
FF ++ L +V EY+
Sbjct: 108 ---FFGVCTEGRPLL-MVFEYM 125
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 136 KHCFFSTTSKDELFLNLVMEYV 157
FF ++ L +V EY+
Sbjct: 79 ---FFGVCTEGRPLL-MVFEYM 96
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 201 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 234
Y APE + G E T DI+S G VL E++ G P
Sbjct: 192 YXAPEALRG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPT 256
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC 278
Query: 257 REEIR-CMNPNYTDF-RFPQIKAHPW 280
+ IR C+ +D F +I+ HPW
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMDHPNV 132
+G GS+G VF+ + E G A+K+ + R K+R +L + H V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV 113
>pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 28 FDNDLLKRHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGT 87
DND L+R +P S AV+ G+ ++ K P++ + + E V
Sbjct: 88 MDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSI 147
Query: 88 GSFGIV 93
GS G+V
Sbjct: 148 GSEGLV 153
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 198 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPT 256
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC 235
Query: 257 REEIR-CMNPNYTDF-RFPQIKAHPW 280
+ IR C+ +D F +I+ HPW
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 72 EPKQTISYMAER-VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHP 130
E ++ + +M + VG GSFG V + K +TG A+KKV + ++ EL + P
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSSP 110
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
++ L ++ ++N+ ME + ++ +++K + + L Y+
Sbjct: 111 RIVPL-----YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYL 156
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 187 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQL 245
+K + +R Y PE I + S +WS G +L +++ G P E +
Sbjct: 166 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
Query: 246 VEIIKVLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 280
V + + + + IR C+ +D F +I+ HPW
Sbjct: 226 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 187 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQL 245
+K + +R Y PE I + S +WS G +L +++ G P E +
Sbjct: 166 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
Query: 246 VEIIKVLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 280
V + + + + IR C+ +D F +I+ HPW
Sbjct: 226 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 187 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQL 245
+K + +R Y PE I + S +WS G +L +++ G P E +
Sbjct: 165 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
Query: 246 VEIIKVLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 280
V + + + + IR C+ +D F +I+ HPW
Sbjct: 225 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|1JVJ|A Chain A, Crystal Structure Of N132a Mutant Of Tem-1 Beta-Lactamase
In Complex With A N-Formimidoyl-Thienamycine
Length = 263
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 30 NDLLK------RHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYM 80
NDL++ +H D + +E+ +A I +DA +++ TTIGG PK+ +++
Sbjct: 75 NDLVEYSPVTEKHLTDGMTVRELCSAAITMSDATAANLLLTTIGG----PKELTAFL 127
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 72 EPKQTISYMAER-VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHP 130
E ++ + +M + VG GSFG V + K +TG A+KKV + ++ EL + P
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRVEELVACAGLSSP 126
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
++ L ++ ++N+ ME + ++ +++K + + L Y+
Sbjct: 127 RIVPL-----YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYL 172
>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadph And Udp-Glcnac
pdb|2GN4|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadph And Udp-Glcnac
pdb|2GN6|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Glcnac
pdb|2GN6|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Glcnac
pdb|2GN8|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp
pdb|2GN8|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp
pdb|2GN9|A Chain A, Crystal Structure Of Udp-glcnac Inverting 4,6-dehydratase
In Complex With Nadp And Udp-glc
pdb|2GN9|B Chain B, Crystal Structure Of Udp-glcnac Inverting 4,6-dehydratase
In Complex With Nadp And Udp-glc
pdb|2GNA|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Gal
pdb|2GNA|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Gal
Length = 344
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 86 GTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSK 145
GTGSFG F K L+T KK++ R + ++ ++ + P + FF +
Sbjct: 29 GTGSFGKCFVRKVLDTTNA---KKIIVYSRDELKQSEMAMEFNDP-----RMRFFIGDVR 80
Query: 146 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQVKGEANISYICSRYYRAPE 205
D LN +E V ++ + + + PL +K + G +N+ C + +
Sbjct: 81 DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKT---NIMGASNVINACLKNAISQV 137
Query: 206 LIFGATEYTTSIDIWSAGCVLAELLL 231
+ + I+++ A + ++ L
Sbjct: 138 IALSTDKAANPINLYGATKLCSDKLF 163
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLMDHPNVI 133
E+++G+G G V + G+ VAIK + + RR E +M DHPN+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 134 SLK 136
L+
Sbjct: 114 RLE 116
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLMDHPNVI 133
E+++G+G G V + G+ VAIK + + RR E +M DHPN+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 134 SLK 136
L+
Sbjct: 114 RLE 116
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRYKN-RELQLMRLMDHPNVISLKHCF 139
+G G+FG VF + VA+K + D + K +E ++++ HPN++ L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 140 FSTTSKDELFLNLVMEYV 157
T K ++ +VME V
Sbjct: 179 GVCTQKQPIY--IVMELV 194
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRYKN-RELQLMRLMDHPNVISLKHCF 139
+G G+FG VF + VA+K + D + K +E ++++ HPN++ L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 140 FSTTSKDELFLNLVMEYV 157
T K ++ +VME V
Sbjct: 179 GVCTQKQPIY--IVMELV 194
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,987,544
Number of Sequences: 62578
Number of extensions: 467855
Number of successful extensions: 3403
Number of sequences better than 100.0: 827
Number of HSP's better than 100.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 348
Number of HSP's that attempted gapping in prelim test: 1684
Number of HSP's gapped (non-prelim): 1447
length of query: 375
length of database: 14,973,337
effective HSP length: 100
effective length of query: 275
effective length of database: 8,715,537
effective search space: 2396772675
effective search space used: 2396772675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)