BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017224
MASTHAHQNLRPIAASGLTSHQLSTTRPVRLYFPPRSFKSRSIAVKTNQNLKWAVRLSLV
DQSSPPQSTVDVEWLVGFLYDDLPHLFDDQGIDRTAYDEQVKFRDPITKHDTISGYLFNI
SMLKMVFRPAFQLHWVKQTGPYEITTRWTMVMKFMPLPWKPELVFTGTSVMGINPETGKF
CSHLDLWDSIKNNDYFSLEGFLDVLKQLRIYKTPDLETPKYQILKRTANYEVRRYSPFIV
VETNGDKLSGSTGFNDVAGYIFGKNSKTEKIPMTTPVFTQAYDNELKKVSIQIVLPQDKD
MSSLPDPNQETLDLRKVEGGIAAVLKFSGKPTEDIVHEKEKELHTSLIRDGLRPKIGCLL
ARYNDPGQTWSFIMV

High Scoring Gene Products

Symbol, full name Information P value
AT3G10130 protein from Arabidopsis thaliana 1.3e-14
SOUL-1 protein from Arabidopsis thaliana 5.2e-09
HBP1
AT1G17100
protein from Arabidopsis thaliana 7.7e-07
AT1G78460 protein from Arabidopsis thaliana 0.00034

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017224
        (375 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100043 - symbol:AT3G10130 "AT3G10130" species...   205  1.3e-14   1
TAIR|locus:2065578 - symbol:SOUL-1 species:3702 "Arabidop...   152  5.2e-09   1
TAIR|locus:2020307 - symbol:HBP1 "AT1G17100" species:3702...   136  7.7e-07   1
TAIR|locus:2032055 - symbol:AT1G78460 species:3702 "Arabi...   113  0.00034   1


>TAIR|locus:2100043 [details] [associations]
            symbol:AT3G10130 "AT3G10130" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009535 GO:GO:0010287
            EMBL:AC010927 EMBL:AY099746 EMBL:BT026078 EMBL:BT020479
            IPI:IPI00527808 RefSeq:NP_187624.1 UniGene:At.28203
            ProteinModelPortal:Q9SR77 SMR:Q9SR77 PaxDb:Q9SR77 PRIDE:Q9SR77
            EnsemblPlants:AT3G10130.1 GeneID:820176 KEGG:ath:AT3G10130
            TAIR:At3g10130 eggNOG:NOG86107 HOGENOM:HOG000240036
            InParanoid:Q9SR77 OMA:QYNPPFT PhylomeDB:Q9SR77
            ProtClustDB:CLSN2683999 Genevestigator:Q9SR77 InterPro:IPR011256
            InterPro:IPR006917 PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136
            Uniprot:Q9SR77
        Length = 309

 Score = 205 (77.2 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 54/159 (33%), Positives = 85/159 (53%)

Query:   214 PDLETPKYQILKRTANYEVRRYSPFIVVET-----NG-DKLSGSTGFNDVAGYIFGKNSK 267
             PDLET  +++L RT  YE+R+  P+ V ET      G D    S  FN +A Y+FGKN+ 
Sbjct:   112 PDLETMNFRVLFRTDKYEIRQVEPYFVAETIMPGETGFDSYGASKSFNVLAEYLFGKNTI 171

Query:   268 TEKIPMTTPVFTQAYDN--ELKKVSIQIVLPQDKDM--------------SSLPDPNQET 311
              EK+ MTTPV T+   +  E  +++  ++  + KD               S+LP P   +
Sbjct:   172 KEKMEMTTPVVTRKVQSVGEKMEMTTPVITSKAKDQNQWRMSFVMPSKYGSNLPLPKDPS 231

Query:   312 LDLRKVEGGIAAVLKFSGKPTEDIVHEKEKELHTSLIRD 350
             + +++V   I AV+ FSG  T++ +  +E+EL  +L  D
Sbjct:   232 VKIQQVPRKIVAVVAFSGYVTDEEIERRERELRRALQND 270


>TAIR|locus:2065578 [details] [associations]
            symbol:SOUL-1 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0010017 "red
            or far-red light signaling pathway" evidence=IMP] [GO:0005829
            "cytosol" evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0009744 "response to sucrose stimulus" evidence=RCA]
            [GO:0009813 "flavonoid biosynthetic process" evidence=RCA]
            [GO:0010224 "response to UV-B" evidence=RCA] GO:GO:0005886
            GO:GO:0005794 GO:GO:0005773 EMBL:CP002685 GO:GO:0010017
            InterPro:IPR011256 InterPro:IPR006917 PANTHER:PTHR11220
            Pfam:PF04832 SUPFAM:SSF55136 IPI:IPI00539344 RefSeq:NP_565876.2
            UniGene:At.24015 UniGene:At.66364 ProteinModelPortal:F4IRX7
            SMR:F4IRX7 PRIDE:F4IRX7 EnsemblPlants:AT2G37970.1 GeneID:818374
            KEGG:ath:AT2G37970 OMA:KPEKIAM Uniprot:F4IRX7
        Length = 225

 Score = 152 (58.6 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 39/103 (37%), Positives = 59/103 (57%)

Query:   267 KTEKIPMTTPVFTQAYDNELKK--VSIQIVLPQD-KDMSSLPDPNQETLDLRKVEGGIAA 323
             ++EKI MT+PV T+    E +K  V++Q +LP   K     P P  E + +++  G    
Sbjct:   107 ESEKIEMTSPVVTKEGGGEGRKKLVTMQFLLPSMYKKAEEAPRPTDERVVIKEEGGRKYG 166

Query:   324 VLKFSGKPTEDIVHEKEKELHTSLIRDGLRPKIGCLLARYNDP 366
             V+KFSG  +E +V EK K+L + L +DG +     +LARYN P
Sbjct:   167 VIKFSGIASESVVSEKVKKLSSHLEKDGFKITGDFVLARYNPP 209

 Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 36/101 (35%), Positives = 52/101 (51%)

Query:   216 LETPKYQILKRTANYEVRRYSPFIVVETNGD--KLSGST--GFNDVAGYI--FGK--NSK 267
             +ETPKY + K    YE+R Y P +  E   D  +  G    GF  +A YI  FGK  N K
Sbjct:    20 VETPKYTVTKSGDGYEIREYPPAVAAEVTYDASEFKGDKDGGFQLLAKYIGVFGKPENEK 79

Query:   268 TEKIPMTTPVFTQAYDNELKKVSIQI-VLPQDKDMSSLPDP 307
              EKI MT PV T+    E +K+++   V+ ++ +   +  P
Sbjct:    80 PEKIAMTAPVITK----EGEKIAMTAPVITKESEKIEMTSP 116


>TAIR|locus:2020307 [details] [associations]
            symbol:HBP1 "AT1G17100" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005774 EMBL:AC007651
            eggNOG:NOG86107 InterPro:IPR011256 InterPro:IPR006917
            PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136 HOGENOM:HOG000237638
            OMA:TVAQYNS EMBL:AY086962 EMBL:BT024615 IPI:IPI00517681 PIR:G86306
            RefSeq:NP_173153.1 UniGene:At.21016 UniGene:At.48199
            ProteinModelPortal:Q9SHG8 SMR:Q9SHG8 IntAct:Q9SHG8 STRING:Q9SHG8
            PaxDb:Q9SHG8 PRIDE:Q9SHG8 DNASU:838280 EnsemblPlants:AT1G17100.1
            GeneID:838280 KEGG:ath:AT1G17100 TAIR:At1g17100 InParanoid:Q9SHG8
            PhylomeDB:Q9SHG8 ProtClustDB:CLSN2681876 Genevestigator:Q9SHG8
            Uniprot:Q9SHG8
        Length = 232

 Score = 136 (52.9 bits), Expect = 7.7e-07, P = 7.7e-07
 Identities = 44/140 (31%), Positives = 66/140 (47%)

Query:   216 LETPKYQILKRTANYEVRRYSPFIVVETNG-DKLS----GSTGFNDVAGYIFGKNSKTEK 270
             +E P Y+++     YE+RRY+  + V T     +S      T F  +  YI GKN   +K
Sbjct:    45 IECPSYELVHSGNGYEIRRYNNTVWVSTEPIPDISLVDATRTAFFQLFAYIQGKNEYHQK 104

Query:   271 IPMTTPVFTQAY--DNELKKVSIQIVLPQDKDMSSLPDPN-QETLDLRKVEGGIAAVLKF 327
             I MT PV +Q    D    + S  +     K   + PDP   E L ++K      AV +F
Sbjct:   105 IEMTAPVISQVSPSDGPFCESSFTVSFYVPK--KNQPDPAPSENLHIQKWNSRYVAVRQF 162

Query:   328 SGKPTEDIVHEKEKELHTSL 347
             SG  ++D + E+   L +SL
Sbjct:   163 SGFVSDDSIGEQAAALDSSL 182


>TAIR|locus:2032055 [details] [associations]
            symbol:AT1G78460 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC013430
            EMBL:AC007260 InterPro:IPR011256 InterPro:IPR006917
            PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136 HOGENOM:HOG000237638
            EMBL:AK317161 IPI:IPI00530601 PIR:A96813 RefSeq:NP_177967.1
            UniGene:At.14786 ProteinModelPortal:Q9SYN5 SMR:Q9SYN5 PRIDE:Q9SYN5
            EnsemblPlants:AT1G78460.1 GeneID:844182 KEGG:ath:AT1G78460
            TAIR:At1g78460 InParanoid:Q9SYN5 OMA:WISTSPI PhylomeDB:Q9SYN5
            ProtClustDB:CLSN2912693 Genevestigator:Q9SYN5 Uniprot:Q9SYN5
        Length = 219

 Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
 Identities = 45/167 (26%), Positives = 73/167 (43%)

Query:   217 ETPKYQILKRTANYEVRRYSPFIVVETNG-DKLSGS----TGFNDVAGYIFGKNSKTEKI 271
             E P Y++++    +E+R Y   + + T+    LS +    TGF  +  YI G N    K+
Sbjct:    44 ECPTYKLVEAGYGFEIRMYDAALWISTSPIPSLSMTQATKTGFRRLNRYIEGDNKSNVKM 103

Query:   272 PMTTPVFTQAYDNELKKVSIQIVLPQDKDMSSLPDPNQETLDLRKVEGGIAAVLKFSGKP 331
              MT PV  QA        ++ + LP+    +  P P  + L +R  +    AV +  G  
Sbjct:   104 NMTAPVIAQATPGR-SVYTVSLYLPKKNQQN--P-PQADDLHVRSTKPTYVAVRQIGGYV 159

Query:   332 TEDIVHEKEKELHTSLIRDG--LRP------KIGC-LLARYNDPGQT 369
             + ++  ++   L  SL RD   + P      K+    LA YN P  T
Sbjct:   160 SNNVAKDEAAALMESL-RDSNWILPIEKSKGKLPAYFLAVYNPPSHT 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      375       375   0.00088  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  262 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.61u 0.15s 31.76t   Elapsed:  00:00:02
  Total cpu time:  31.61u 0.15s 31.76t   Elapsed:  00:00:02
  Start:  Tue May 21 05:34:03 2013   End:  Tue May 21 05:34:05 2013

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