BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017235
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/366 (71%), Positives = 301/366 (82%), Gaps = 7/366 (1%)
Query: 1 MELAFAHFSSLRISAVTS--FRSTYPHQTKTPIKPNCISSEHLSKTSNKFPSFGLYRHRT 58
MEL+ + +R S++ +++ H+ + IS +F S R R+
Sbjct: 1 MELSISQSPRVRFSSLAPRFLAASHHHRPSVHLAGKFISLPR----DVRFTSLSTSRMRS 56
Query: 59 GFKHASKQRNFIWASSQIGAAGSD-PLLNKVSAFRDACWRFLRPHTIRGTALGSVALVAR 117
F + ++ I A SQ+GAA SD P+L++++ F++ACWRFLRPHTIRGTALGS ALV R
Sbjct: 57 KFVSTNYRKISIRACSQVGAAESDDPVLDRIARFQNACWRFLRPHTIRGTALGSTALVTR 116
Query: 118 ALIENPNLIKWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQ 177
ALIEN +LIKWSL+LKA SGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQ
Sbjct: 117 ALIENTHLIKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQ 176
Query: 178 SAWFLVIFFAVTGLLIVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATV 237
SAW LVIFFA+ GLL+V FNFGPFITSLY LGLFLGTIYSVPP RMKRF VAAFLIIATV
Sbjct: 177 SAWLLVIFFAIAGLLVVGFNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLIIATV 236
Query: 238 RGFLLNFGVYYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKIST 297
RGFLLNFGVY+ATRAALGL F+W+APVAFIT+FVTLFALVIA+TKDLPDVEGDRKF+IST
Sbjct: 237 RGFLLNFGVYHATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQIST 296
Query: 298 LATKLGVKNIAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWLLE 357
LATKLGV+NIAFLGSGLLL+NYV+AI A YMPQ FR +LMIPAHVILAS L+FQTW+LE
Sbjct: 297 LATKLGVRNIAFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLE 356
Query: 358 RANYTK 363
+ANYTK
Sbjct: 357 KANYTK 362
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/299 (76%), Positives = 258/299 (86%)
Query: 65 KQRNFIWASSQIGAAGSDPLLNKVSAFRDACWRFLRPHTIRGTALGSVALVARALIENPN 124
+R+ + SQ GAAG PL +S +D+CWRFLRPHTIRGTALGS+ALVARALIENP
Sbjct: 57 SRRDAVRVCSQAGAAGPAPLSKTLSDLKDSCWRFLRPHTIRGTALGSIALVARALIENPQ 116
Query: 125 LIKWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVI 184
LI W L+ KAF GL+ALICGNGYIVGINQIYDI IDKVNKPYLPIAAGDLSVQ+AW LV+
Sbjct: 117 LINWWLVFKAFYGLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVV 176
Query: 185 FFAVTGLLIVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNF 244
FA G IV NFGPFITSLYCLGLFLGTIYSVPPFR+KR+ VAAFLIIATVRGFLLNF
Sbjct: 177 LFAAAGFSIVVTNFGPFITSLYCLGLFLGTIYSVPPFRLKRYPVAAFLIIATVRGFLLNF 236
Query: 245 GVYYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGV 304
GVYYATRAALGL+F+W++PVAFIT FVTLFALVIA+TKDLPDVEGDRK++ISTLATKLGV
Sbjct: 237 GVYYATRAALGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGV 296
Query: 305 KNIAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWLLERANYTK 363
+NIAFLGSGLL+ NYVAAI A MPQAFRR +M+P H LA ++FQTW+LE+A YTK
Sbjct: 297 RNIAFLGSGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTK 355
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 195/380 (51%), Gaps = 35/380 (9%)
Query: 9 SSLRISAVTSFRSTYPHQTKTPIKPNCISSEHLSKTSNKFPSFGLY-RHRTGFKHASKQR 67
+L++ +++ R +K KP +L + + S LY +H++ F+ +
Sbjct: 22 QNLKLHSLSEIRVLRCDSSKVVAKPKF--RNNLVRPDGQGSSLLLYPKHKSRFRVNA--- 76
Query: 68 NFIWASSQIGAAGSDPLLNKVSAFRD---ACWRFLRPHTIRGTALGSVALVARALIENPN 124
+ Q A S+ +K +FRD A +RF RPHT+ GT L S+ V+ +E +
Sbjct: 77 ----TAGQPEAFDSN---SKQKSFRDSLDAFYRFSRPHTVIGTVL-SILSVSFLAVEKVS 128
Query: 125 LIKWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVI 184
I L ++A + N YIVG+NQ+ D+ IDKVNKPYLP+A+G+ SV + +V
Sbjct: 129 DISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVA 188
Query: 185 FFAVTGLLIVAFNFG------PFITSLYCLGLFLGTIYSV--PPFRMKRFAVAAFLIIAT 236
F+ I++F G P +L+ + LGT YS+ P R KRFA+ A + I
Sbjct: 189 SFS-----IMSFWLGWIVGSWPLFWALF-VSFMLGTAYSINLPLLRWKRFALVAAMCILA 242
Query: 237 VRGFLLNFGVYYATRA-ALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKI 295
VR ++ Y + G + P+ F TAF++ F++VIA+ KD+PD+EGD+ F I
Sbjct: 243 VRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGI 302
Query: 296 STLATKLGVKNIAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQTWL 355
+ + LG K + + LL + Y AIL P + + + + HVILA+ L +
Sbjct: 303 RSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKS 362
Query: 356 LERANYTKVILATCCTLGMW 375
++ ++ T++ T C + +W
Sbjct: 363 VDLSSKTEI---TSCYMFIW 379
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 169/331 (51%), Gaps = 31/331 (9%)
Query: 41 LSKTSNKFPSFGLYRHRTGFKHASKQRNFIWASSQIGAAG-----------SDPLLNKVS 89
LS + PSF + G+K + + SS A+G S + +S
Sbjct: 46 LSSQRTQGPSFDQCQKFFGWKSSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPIS 105
Query: 90 AFRDACWRFLRPHTIRGTALG--SVALVARALIENPNLIKWSLLLKAFSGLLALICGNGY 147
+ DA +RF RPHT+ GTAL SV+L+A +EN + + L ++A + N Y
Sbjct: 106 SSLDAFYRFSRPHTVIGTALSIVSVSLLA---VENLSDVSPLFLTGLLEAVVAALFMNIY 162
Query: 148 IVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGL-LIVAFNFGPFITSLY 206
IVG+NQ++DI IDKVNKP LP+A+G+ S + LV FA L A P +L+
Sbjct: 163 IVGLNQLFDIEIDKVNKPTLPLASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALF 222
Query: 207 CLGLFLGTIYSV--PPFRMKRFAVAAFLIIATVRG------FLLNFGVYYATRAALGLSF 258
+ LGT YS+ P R KR AV A L I VR F L+ + R A+
Sbjct: 223 -ISFILGTAYSINLPFLRWKRSAVVAALCILAVRAVIVQLAFFLHIQTFVFRRPAV---- 277
Query: 259 EWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLN 318
+ P+ F TAF+T F++VIA+ KD+PD+EGDR F I + + +LG K + ++ GLL +
Sbjct: 278 -FTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMA 336
Query: 319 YVAAILAAIYMPQAFRRNLMIPAHVILASCL 349
Y AIL + + + H ILA+ L
Sbjct: 337 YCVAILMGATSACLWSKYATVVGHAILAAIL 367
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 151/287 (52%), Gaps = 28/287 (9%)
Query: 82 DP--LLNKVSAFRDACWRFLRPHTIRGTALGSV--ALVARALIENPNLIKWSLLLKAFSG 137
DP + + V+ D ++F RP+ + LG+ +LVA +E + + + +
Sbjct: 102 DPESIWDSVNDALDIFYKFCRPYAMFTIVLGATFKSLVA---VEKLSDLSLAFFIGWLQV 158
Query: 138 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAF- 196
++A+IC + + VG+NQ+ DI IDK+NKP LP+A+G LS ++ +VI A + +L + F
Sbjct: 159 VVAVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRN---VVIITASSLILGLGFA 215
Query: 197 ---NFGPFITSLYCLGLFLGTIYSV--PPFRMKRFAV-AAFLIIATVR-----GFLLNFG 245
+ P +++ + + + Y+V P R K++ V A IA V GF L+
Sbjct: 216 WIVDSWPLFWTVF-ISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQ 274
Query: 246 VYYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVK 305
R + P+ F TA V+++A+VIA+ KD+PD+EGD KF I +L+ +LG K
Sbjct: 275 TCVFKRPT-----TFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPK 329
Query: 306 NIAFLGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAHVILASCLLFQ 352
+ ++ LL + Y IL P + + + + H +LAS L +
Sbjct: 330 RVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYH 376
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 157/331 (47%), Gaps = 35/331 (10%)
Query: 34 NCISSEHLSKTSN-KFPSFGLYRHRTGFK-HASKQRNFIWASSQIGAAGSDPLLNKVSAF 91
CI + N KF + + GF+ HAS +N + D + N +SAF
Sbjct: 68 KCIRGGSTYQECNRKFVVKAISKQPLGFEAHASNPKNIL-----------DSVKNVLSAF 116
Query: 92 RDACWRFLRPHTIRGTALG--SVALVARALIENPNLIKWSLLLKAFSGLLALICGNGYIV 149
+ F P+T+ G L S +L+A +E + I S L+ G+L + Y+
Sbjct: 117 ----YWFSYPYTMIGITLCAFSSSLLA---VEKLSDISLSFLIGVLQGVLPQLFIEIYLC 169
Query: 150 GINQIYDIGIDKVNKPYLPIAAGDLSVQ-----SAWFLVIFFAVTGLLIVAFNFGPFITS 204
G+NQ+YD+ IDK+NKP+LP+A+G S + SA FL + F T + P I +
Sbjct: 170 GVNQLYDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWIT----GSWPLICN 225
Query: 205 LYCLGLFLGTIYS--VPPFRMKRFA-VAAFLIIATVRGFLLNFGVYYATRAALGLSFEWN 261
L + T YS VP R KR+ VAA +I+T L ++ L +
Sbjct: 226 LVVIASSW-TAYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFP 284
Query: 262 APVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVA 321
+ F+ AF+T ++L +A++KD+PDVEGD++ I + A +LG K ++ + +
Sbjct: 285 RSLGFLVAFMTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGV 344
Query: 322 AILAAIYMPQAFRRNLMIPAHVILASCLLFQ 352
ILA + + + +LAS L +Q
Sbjct: 345 GILAGASCSHFWTKIFTGMGNAVLASILWYQ 375
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 97 RFLRPHTIRGTALGSVA--LVARALIENPNLIKWSLLLKAF---SGLLALICGNGYIVGI 151
+ +R H + G ALG++ LV+ +W L LK + ++ LI GY+ I
Sbjct: 8 QLVRIHNVIGAALGAIMGFLVSS---------QWYLELKGILLSALVVGLIAAGGYV--I 56
Query: 152 NQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGL-LIVAFNFGPFITSLYCLGL 210
N +YD+ IDK+NKPY PI +G +SV A L I + G+ L + N + +L
Sbjct: 57 NDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTA-- 114
Query: 211 FLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSF---EWNAPVAFI 267
+G IY +K+ L++AT + +G GL+F W +
Sbjct: 115 -IGLIYYAK--DLKKTGFYGNLLVATTTALSIFYG---------GLAFFSDNWLLRIIIP 162
Query: 268 TAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKN 306
T + L+ + K + D GD + TLAT LG+
Sbjct: 163 TLYAFFLTLIREIVKGIEDYNGDSLNNVKTLATTLGINK 201
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 138 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAF 196
+++LI GY+ IN +YDI +DK+NKP P+ +G ++V A F ++ FAV ++ +
Sbjct: 44 VVSLIAAGGYV--INDVYDIEVDKINKPERPLPSGRIAVNIARRFSIVLFAVGLIISIPL 101
Query: 197 NFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGL 256
PF +L + L S +K+ + I+A YY A+ L
Sbjct: 102 GLIPFGFALITIVLLYEYARS-----LKKLGLVGNFIVALTSA----LSAYYGGLASGSL 152
Query: 257 SFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKN 306
+ P T ++ F L K + D+EGD++ ++TLA KLG K+
Sbjct: 153 LGNFIIP----TIYIFFFTLSREFVKGIEDIEGDKRNGVNTLAVKLGEKS 198
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 143 CGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAWFLVIFFAVTGLL--IVAF 196
C GY IN YD ID +N+PY PI +G +S + W L++ G L + A
Sbjct: 135 CLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAG 194
Query: 197 NFGPFITSLYCLGLFLGTIYSVPPFRMKRFA-VAAFLIIATVRGFLLNFGVYYATRAALG 255
+ P I L G L IYS PP ++K+ + F + A+ G ++A +A G
Sbjct: 195 HDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGL-----PWWAGQALFG 249
Query: 256 LSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSG 313
+ +T+ ++ L IA+ D VEGDR + +L G++ ++ G
Sbjct: 250 TL---TPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVG 304
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 138 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAWFLVIFFAVTGLL- 192
L++ C GY IN YD ID +N+PY PI +G +S + W L++ G L
Sbjct: 132 LMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALL 191
Query: 193 -IVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFA-VAAFLIIATVRGFLLNFGVYYAT 250
I A + P I L G L IYS PP ++K+ + F + A+ G ++A
Sbjct: 192 DIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGL-----PWWAG 246
Query: 251 RAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFL 310
+A G + +T ++ L IA+ D +EGDR + +L G++ ++
Sbjct: 247 QALFGTL---TPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWI 303
Query: 311 GSG 313
G
Sbjct: 304 CVG 306
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+CG G +N I DI IDK+NKP P+ + +S++SA ++G++I FN
Sbjct: 51 LVCGFGN--ALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIISLFNMIC 108
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
F + L + + + KR + LI+A + G + FG A++G
Sbjct: 109 F-----AIALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFG-----GASVG----- 153
Query: 261 NAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLL 316
N + I LFA + KD D++GD+ + +L K G KN F+ G LL
Sbjct: 154 NVEITLILFLCALFATWSREIIKDYEDLDGDKSEGVISLPIKYG-KNSIFVAIGFLL 209
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+CG G +N IYD+ IDK+NKP PI + +S+ A V GL+I FN
Sbjct: 49 LVCGFGN--ALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIISMFNITC 106
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
F+ + + + K+ + LI+A + G + FG A+G
Sbjct: 107 FL-----MAVLNSIVLQQYASTYKKNKIVGNLIVAYLTGSVFIFG-----GIAVG----- 151
Query: 261 NAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNI 307
N V + LFA+ + KD D+EGD K K+ ++ K G K+I
Sbjct: 152 NIDVTIMLFLCALFAMWSREIIKDYEDIEGDIKEKVISIPIKCGEKSI 199
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 47/238 (19%)
Query: 122 NPNLIKWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQ 177
P + S+L SG C GY IN YD ID +N+PY PI +G +S +
Sbjct: 129 TPEDVAKSILCMMMSGP----CLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVIT 184
Query: 178 SAWFLVIFFAVTGLL--IVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIA 235
W L++ + + A + P + L G L IYS PP ++K+
Sbjct: 185 QVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQ---------- 234
Query: 236 TVRGFLLNFGV--------YYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDV 287
G++ NF + ++A +A G V +T ++ L IA+ D V
Sbjct: 235 --NGWVGNFALGASYISLPWWAGQALFG---TLTPDVVVLTLLYSIAGLGIAIVNDFKSV 289
Query: 288 EGDRKFKISTLATKLGVKNIAFLGSGLLLLN--------------YVAAILAAIYMPQ 331
EGDR + +L G + ++ G + + Y A L A+ +PQ
Sbjct: 290 EGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQ 347
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 98/222 (44%), Gaps = 27/222 (12%)
Query: 87 KVSAFRDACWRFLRPHTIRGTALGSVALVARALIENPNLIKWSLLLKAFSGLLALICGNG 146
VSAF R RPH G AL+ LI L SLLL ++ALI G
Sbjct: 2 SVSAF----IRITRPH--NAVVAGLTALIGY-LIATGTLTPPSLLLAV---IVALITAGG 51
Query: 147 YIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLY 206
+ IN + D+ ID++N+P PI AGD+S+ A V G+ I +T+
Sbjct: 52 NV--INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIAT------LTTTL 103
Query: 207 CLGLFL--GTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPV 264
CL + + I V R+KR V + +A + G + FG +A L N +
Sbjct: 104 CLAIAIINSVILIVYAVRLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGL----VRNLSL 159
Query: 265 AFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKN 306
A IT T+ ++ KD DV+GD TL +GV+
Sbjct: 160 AAITFLATIARELL---KDAEDVDGDAAGGARTLPMIVGVRK 198
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 29/250 (11%)
Query: 93 DACWRFLRPHTIRGTALGSVALVARALIENPNLIKWSLLLKAFSGLLALICGNGYIVGIN 152
A + +R H + G+A+ + + ++ L+L ++++I GYI IN
Sbjct: 4 KAYFELVRIHNVIGSAIS--VFMGYVVASEWKIVPIKLILAMI--VVSVIAAGGYI--IN 57
Query: 153 QIYDIGIDKVNKPYLPIAAGDLSVQSAWFL-VIFFAVTGLLIVAFNFGPFITSLYCLGLF 211
++DI IDK+NKP P+ +G + + A L ++ F V +L V N FI +L +
Sbjct: 58 DVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLTV--- 114
Query: 212 LGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSF---EWNAPVAFIT 268
L Y +K+ + LI+A +G GL+F W T
Sbjct: 115 LALYYYAKD--LKKQGLVGNLIVALTSALSAFYG---------GLAFFEGSWVIRTLIPT 163
Query: 269 AFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAILAAIY 328
++ F L K + DV+GD + TLA ++G++ F+ +L++ V + +
Sbjct: 164 LYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVILIVTS-----F 218
Query: 329 MPQAFRRNLM 338
+P F N++
Sbjct: 219 IPYFFGFNII 228
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+CG G +N IYD+ IDK+NKP PI + LS+ A GL I FN
Sbjct: 49 LVCGFGN--ALNDIYDLKIDKINKPERPIPSKRLSLTDARVFSYLLVFVGLFISLFNMAC 106
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
F+ + + + K+ + LI+A + G + FG A+G
Sbjct: 107 FL-----MAVLNSIVLQQYASTYKKNKIIGNLIVAYLTGSVFIFG-----GIAVG----- 151
Query: 261 NAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNI 307
N V + LFA+ + KD D+EGD + K+ ++ K G K++
Sbjct: 152 NIDVTIMLFLCALFAMWSREIIKDYEDIEGDIQEKVISIPIKCGEKSV 199
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+ G G G+N +DI IDKVNKP PI +G +S++SA + +F +TG+ + AF P
Sbjct: 54 LVTGAGN--GLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITL-AFLVNP 110
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
+ + +Y+ R F A+ + + G FG A G++
Sbjct: 111 LCGIIALFNSMVLILYAQSLKRTPFFGNAS---VGYLTGSTFLFG-----GAVFGMAGLQ 162
Query: 261 NAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
V F+ A TL + + KD+ D+ GD+K TL +G K +++ +
Sbjct: 163 ALVVLFLLA--TLATIAREIVKDVEDIVGDKKDGARTLPILIGAKKASYIAA 212
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 28/172 (16%)
Query: 142 ICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPF 201
ICG G +N IYD+ ID++NKP+ PI + +S+ A + GL+I FN
Sbjct: 50 ICGFGN--SLNDIYDLKIDRINKPFRPIPSKRISLTDAKVFSYSIMIFGLIISLFN---- 103
Query: 202 ITSLYCLGLFLGTIYSVPPFR-----MKRFAVAAFLIIATVRGFLLNFGVYYATRAALGL 256
+YC FL + + + K+ + +++A + G + FG A+G
Sbjct: 104 ---IYC---FLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVFIFG-----GIAVG- 151
Query: 257 SFEWNAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNI 307
N V+ +F++ + KD D+EGD K K+S+L K G K+I
Sbjct: 152 ----NVNVSLYLFSCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSI 199
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+CG G +N IYD+ ID++NKP PI + +++ +A V GL I FN
Sbjct: 49 LVCGFGN--ALNDIYDLKIDRINKPKRPIPSKRITLNNAKVFSYSLVVMGLFISLFN--- 103
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
S + + + + K+ + LI+A + G + FG A+G
Sbjct: 104 --ISCFLMAVLNSIVLQQYASTYKKNKIIGNLIVAYLTGSVFIFG-----GIAVG----- 151
Query: 261 NAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNI 307
N V + LFA+ + KD D+EGD K K+ ++ K G ++I
Sbjct: 152 NIDVTIMLFLCALFAMWSREIIKDYEDIEGDLKEKVISIPIKCGERSI 199
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+CG G +N IYD+ ID++NKP PI + +S+ +A TGL I FN
Sbjct: 49 LVCGFGN--ALNDIYDLKIDRINKPERPIPSKRISLTNARIFSYLLVFTGLCISLFNITC 106
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEW 260
F+ + + + K+ + LI+A + G + FG A+G
Sbjct: 107 FL-----MAVLNSIVLQQYASTYKKNKIIGNLIVAYLTGSVFIFG-----GIAVG----- 151
Query: 261 NAPVAFITAFVTLFAL-VIAVTKDLPDVEGDRKFKISTLATKLGVKNI 307
N V + LFA+ + KD D+EGD + K+ ++ K G +I
Sbjct: 152 NIDVTIMLFLCALFAMWSREIIKDYEDIEGDIQEKVISIPIKCGENSI 199
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 48/242 (19%)
Query: 139 LALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNF 198
L L+ GN IN YD ID +NKPY PI +G +S + A + I ++ G+
Sbjct: 47 LVLMAGNA----INDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGI------- 95
Query: 199 GPFITSLYCLGLFLGTI--YSVPPFRMKRFAVAAFLIIATVRG-FLLNFGV----YYATR 251
L +FLG I V F + +A A +L V G L++ GV + +
Sbjct: 96 --------ALSIFLGFIEFLIVTAFSLSWYAYARWLKRTGVPGNALVSLGVAFTLIFGSL 147
Query: 252 AALGLSFEWN--APVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAF 309
AA L+ + + VAF + + F K + D+ GDR + T+A ++GVK
Sbjct: 148 AAGNLTNKVIIFSSVAFTSNLIREF------VKAVEDLPGDRAHGVRTIAVRIGVKR--- 198
Query: 310 LGSGLLLLNYVAAILAAIYMPQAFRRNLMIPAH---------VILASCLLFQTWLLERAN 360
+G+L+ A + +P FR +I ++LAS + + L ERA
Sbjct: 199 --TGILVFLLSLATVVLTILPVIFRLTGIIYLSLSVIISLPILMLASAICLKGKLEERAR 256
Query: 361 YT 362
T
Sbjct: 257 ET 258
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 97 RFLRPHTIRGTALGS-VALVARALIE-NPNLIKWSLLLKAFSGLLALICGNGYIVGINQI 154
+ +R H + G LG+ VA ++ + +P + ++L+ +AL+ G IN +
Sbjct: 6 KLVRIHNVIGAGLGAFTGYVASSMWKIDPTELILAVLV------VALVDAGGN--AINDV 57
Query: 155 YDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLYCLGLFLGT 214
YD+ ID++NKP PI +G +S+++A L + + G+ ++ ++ L L +
Sbjct: 58 YDVEIDRINKPDRPIPSGAVSLRTATSLS--YGLMGVGVILSALQGYLQFLVALLTSVAL 115
Query: 215 IYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSF---EWNAPVAFITAFV 271
I+ +KR + L++AT L +G GLS+ +W + +
Sbjct: 116 IFYAR--DLKRTGIYGNLVVATATALSLFYG---------GLSYHEGDWLQRIWIPVLYT 164
Query: 272 TLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKN 306
L L + K + D GD ++TLAT G+ +
Sbjct: 165 FLLTLSREIVKGIEDYRGDLANHVNTLATTRGIAS 199
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 127 KWSLLLKAFSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFF 186
KW L+L L+CG N D +D VN+P PI +G + W L I
Sbjct: 48 KWPLVLLGMVLAGPLVCGMSQAA--NNWCDRHVDAVNEPDRPIPSG--RIPGRWGLYIAL 103
Query: 187 AVTGL-LIVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFG 245
+T L L V + GP+ G+ YSV P R+KR ++A L G
Sbjct: 104 LMTVLSLAVGWMLGPWGFGATVFGVLAAWAYSVEPIRLKRSGWWGPGLVA-----LCYEG 158
Query: 246 VYYATRAALGLSFEWNAPVAFITAFVTLFAL---VIAVTKDLPDVEGDRKFKISTLATKL 302
+ + T AA+ AP FI L+A I D +EGDR+ + +L L
Sbjct: 159 LPWFTGAAV---LSAGAPSFFIVTVALLYAFGAHGIMTLNDFKALEGDRQHGVRSLPVML 215
Query: 303 GVKNIAFLGSGLLLLNYVAAI 323
G + A L ++ + + I
Sbjct: 216 GPEVAAKLACTVMAMAQILVI 236
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFGPFITSLYCLG 209
IN YD ID++N P PI +G + ++ A ++ +I F V+ +L + I + C
Sbjct: 51 INDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCTI 110
Query: 210 LFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITA 269
L + IY+ + +K+ L +A + G FG LG +
Sbjct: 111 LMI--IYA---YDLKQRCFIGNLCVAILTGLTFVFGGLITKDVNLGFILGF--------- 156
Query: 270 FVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAILA 325
F L L + KD+ D+EGD+K TL G K L ++LN + IL+
Sbjct: 157 FAFLMTLSREIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLA---VILNIITCILS 209
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGL-LIVAFNFG 199
++CG N D +D +N+P+ PI +G + W L I A++ L L+V + G
Sbjct: 63 IVCGMSQAA--NDWCDRHVDAINEPHRPIPSG--RIPGLWGLYIAIAMSLLSLVVGWQLG 118
Query: 200 PFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFE 259
+ LG+ YSV P R+KR ++ L G+ + T AA+ L+
Sbjct: 119 SWGFVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVG-----LAYEGLPWITGAAVLLATA 173
Query: 260 WNAPVAFITAFVTLFALV---IAVTKDLPDVEGDRKFKISTLATKLG 303
+P I TL+AL I D +EGDRK I +L G
Sbjct: 174 DTSPGFPIVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYG 220
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLYCLGL 210
IN +D IDK+N+P PI G +S + A F V +V+ + P I + L
Sbjct: 62 INDYFDRAIDKINRPMRPIPRGAISERGAIVFSGFLFVAA--VVSTSVLPLIAIVLALMN 119
Query: 211 FLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITAF 270
L + F K I+A + G FG AA+G ++ V FI A
Sbjct: 120 LLALVAYTELF--KGLPGVGNAIVAYLTGSTFLFGA-----AAIGRITDFGVVVLFILA- 171
Query: 271 VTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAILA-AIYM 329
L + KD+ D++GDRK + TL +GV + +G+LL+ +A+I+ I +
Sbjct: 172 -ALATATREIIKDIEDLDGDRKEGLQTLPIVIGVTPAYRVATGVLLVAVIASIVPYVIGI 230
Query: 330 PQAFRRNLMIPAHVIL 345
+ L++PA +I+
Sbjct: 231 FGIWYLTLVVPADMIM 246
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 135 FSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA--WFLVIFFAVTGLL 192
FS +L LI G G IN +D ID VN+P PI +G +S ++A W + +F A G L
Sbjct: 40 FSAVL-LITGGGN--AINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIA--GCL 94
Query: 193 IVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRA 252
I +L L F+ IY+ R+K VA + I+ + G FG
Sbjct: 95 IAGL-INQSCLALALLNSFVLIIYAA---RLKGLPVAGNIAISYLTGTTFLFG------- 143
Query: 253 ALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
GL+ ++ AF++ L L + KD+ D+ GD TL +G K +F+ +
Sbjct: 144 --GLAASPSSITAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIG-KRKSFVLA 200
Query: 313 GLLLL 317
L+L+
Sbjct: 201 SLVLI 205
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA--WFLVIFFAVTGLLIVAFNF 198
+ICG G + +N +D+ IDKVN+P PI +G +S + A W G+L A
Sbjct: 46 VICGAGNV--LNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVW--------AGILFAAGVA 95
Query: 199 GPFITSLYCLGLFLGTIYSVPPF--RMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGL 256
T+++CL + L + + + + K L +A + G + FG +
Sbjct: 96 AACFTNIWCLAIALVNVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFLVGPE---- 151
Query: 257 SFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFL 310
SF P+ IT F T L + KD D+EGDR TL ++GV+ + L
Sbjct: 152 SFLVMLPLFAITFFGT---LARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVL 202
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA--WFLVIFFAVTGLLIVAFNFGPFITSLYCL 208
IN +D ID +N+P PI +G +S +A W +F + GL + F T+ C+
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLF--LLGLAVSVF------TTPLCM 105
Query: 209 GLFLGTIYSVPPF--RMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNA---- 262
G+ L + + R+K +A + + FG YA W+A
Sbjct: 106 GIALVNALLLVLYAARLKSTPFFGNAAVAFLSASIFLFGGAYA---------GWHALLDM 156
Query: 263 -PVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFL 310
P+A IT F+ + A + KD D+EGDR TLA ++GV+ A +
Sbjct: 157 LPIAAIT-FLAMLAR--ELLKDAEDIEGDRAHGADTLAIRIGVRKTALI 202
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSAW-FLVIFFAVTGLLIVAFNFGPFITSLYCLG 209
IN +D ID +N+P PI +G +S A + +I FA+ L+ F G + L +
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLM--GFYLG-LLPGLVVVS 107
Query: 210 LFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFG--VYYATRAALGLSFEWNAPVAFI 267
L +Y +R+K+ + + I+ + G FG V RA++ L F
Sbjct: 108 SSLLMVYY--AWRLKKRCLVGNITISFLTGLSFVFGGIVLGEVRASILLGF--------- 156
Query: 268 TAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLN-------YV 320
+ L + + KD+ DVEGDR +TL G++ L + +L+ Y+
Sbjct: 157 --YAFLMTMAREIVKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLIASLTSPSLYL 214
Query: 321 AAILAAIYMP 330
I +A+Y+P
Sbjct: 215 LGIFSALYIP 224
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 138 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFN 197
++ L+ GY+ IN YDI D V KP+ PI +G +S +A F GL+I
Sbjct: 54 IVVLVAAGGYV--INDYYDIETDMVAKPWRPIVSGRVSPGAARFYAYMLFTIGLIIALVT 111
Query: 198 FGPFIT-SLYCLGLFLGTIYSVPPFR-MKRFAVAAFLIIATVRGFLLNFGVYYATRAALG 255
FI L L YS R +KR + ++IA + FG YA+ G
Sbjct: 112 CPNFIVFGFAVLNALLVHEYS----RWIKRTGLPGNIVIAFNSASTIVFGALYASCMIKG 167
Query: 256 -LSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
+ A + + AF L L K + DV+GD I TLA + GV+ A++ S
Sbjct: 168 KVVLPSVALIPVLYAF--LLVLGREFVKGIEDVKGDAIAGIGTLAVRFGVRT-AYMAS 222
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAF-NFGPFITSLYC- 207
IN +D IDK+N+P P+ G +S ++A W+ V FA TG+++ F N F+ ++
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFA-TGIVLAWFINIWDFLLAIVAY 114
Query: 208 LGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFI 267
+ +F IY+ +++K +++A++ G +G L + +
Sbjct: 115 VTMF---IYA---WKLKPMPFIGNVVVASLTGATPLYGAIAVGEIGLAGTLA-------L 161
Query: 268 TAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAIL 324
AF L + V KD+ D+EGD TL +G K A++G+ +L VA+ L
Sbjct: 162 CAF--LVNVAREVIKDIEDIEGDMAKGAKTLPILIGRKRAAYVGALFAILTVVASFL 216
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 17/155 (10%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAV-TGLLIVAFNFGPFITSLYCL 208
IN +D +D VN+P PI +G +S +SA F + FAV G+ V I +L +
Sbjct: 52 INDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINRMCLAIAALNSV 111
Query: 209 GLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFIT 268
L+L YS +R+K + ++++ + G FG R A P ++
Sbjct: 112 LLYL---YS---WRLKGTPLIGNVMVSYLVGSCFLFGAAVGQRPA---------PAVWLF 156
Query: 269 AFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLG 303
L LV + KDL DVEGD + TL G
Sbjct: 157 LLAFLANLVREILKDLEDVEGDAALGLKTLPIAYG 191
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFGPFITSLYCLG 209
IN +D IDK+N+P P+ G + + A ++ ++ FAV L N FI
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMGRKVALYYSMLLFAVGLALAYMINIYAFI------- 108
Query: 210 LFLGTIYSVPPF----RMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVA 265
LG I V F ++K +++A + G AT ++ E
Sbjct: 109 --LGVIAYVTMFIYAWKLKPLPFVGNIVVAGLTG---------ATPLYGAVAVEHLGLAG 157
Query: 266 FITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAIL 324
++ L + V KD+ DVEGD TL G K A++G LL +A+ L
Sbjct: 158 YLAICAFLVNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKRAAYVGVLFALLTVIASFL 216
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 29/184 (15%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
L+ G G IN +DI ID +N+P PI +G + + A++ G LI AF+
Sbjct: 62 LVSGAGN--AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLI-AFSINS 118
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRG--FLLNFGVYYATRAA--LGL 256
S+ L +Y+ T++G L N + Y T + G
Sbjct: 119 ICGSIALFNSLLLILYA-----------------KTLKGTPLLGNLSIGYLTGSVFLFGA 161
Query: 257 SFEWNAPVAFITAFVTLFALVIA---VTKDLPDVEGDRKFKISTLATKLGVKNIAFLG-- 311
S + ++ L AL I + KD+ D+EGD TL ++G K +L
Sbjct: 162 SIFGFGGIKALSVLFLLAALAITAREIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAVL 221
Query: 312 SGLL 315
+GLL
Sbjct: 222 TGLL 225
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 152 NQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFGPFITSLYCLGL 210
N +D IDK+N+P P+ G +S ++A ++ ++ +A+ +L N F+ + +
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFA--TIAY 114
Query: 211 FLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITAF 270
FL +Y +++K + + +A + +G R L A I AF
Sbjct: 115 FLTFLYG---WKLKPLPLVGNITVAALTAATPIYGAIGVGRIGL-------AGYLAICAF 164
Query: 271 VTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGSGLLLLNYVAAIL 324
L + + KD+ D+EGD+ TL +G K A + + L +A+ L
Sbjct: 165 --LVNVSREIMKDIEDIEGDKALGARTLPIIIGEKKAAIIAAIFGFLTVIASFL 216
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFG 199
L+ G G IN +D+ ID +N+P PI +G + ++ A +F FA+ LL AF+
Sbjct: 62 LVAGAGN--AINDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTLL--AFSIN 117
Query: 200 PFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRG--FLLNFGVYYATRAALGLS 257
P + + Y+ T++G L N + Y T G S
Sbjct: 118 PICGVIALFNSLVLIFYA-----------------KTLKGTPLLGNLSIGYLT----GSS 156
Query: 258 FEWNAPVAFITAFVTLFALVI---------AVTKDLPDVEGDRKFKISTLATKLGVKNIA 308
F + A V + LF L + + KD+ D+EGD+ TL ++G K +
Sbjct: 157 FLFGASVFGLEGLKALFVLFLLAALAITAREIVKDIEDMEGDKMEGADTLPLRVGAKKAS 216
Query: 309 FLGSGLLLLNYVAAILAAI 327
+L + L+ ++A I + +
Sbjct: 217 YLAA---LIGFLAVIFSPL 232
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 100 RPHTIRGTALGSVALVARALIENPNLIKWSLLLKAFSGLLALICGNGYIVGINQIYDIGI 159
RPH AL + V +++ ++ + +L+ F +++L C G IN +D I
Sbjct: 11 RPHN---CALAGLVGVLGSMVALGSVPEGKILILVFL-VVSLGCAGGNT--INDYFDYEI 64
Query: 160 DKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFGPFITSLYC-LGLFLGTIYS 217
D++N+P P+ G + ++A W+ + FAV L + + F +L + +FL Y+
Sbjct: 65 DRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAYITMFL---YA 121
Query: 218 VPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITAFVTLFALV 277
+++K + +A + G +G + L + + AF L +
Sbjct: 122 ---WKLKPLPFIGNIAVAALTGVTPLYGAIAVGKIGLAGTLA-------VCAF--LVNVA 169
Query: 278 IAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
+ KD+ DVEGD K TL LG + A++ +
Sbjct: 170 REIVKDIEDVEGDLKKGAKTLPIILGRRKAAYVAA 204
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 37/173 (21%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA-WFLVIFFAVTGLLIVAFNFGPFITSLY--- 206
IN +DI ID +N+P PI +G + + A +F + FA LL + N + +L+
Sbjct: 70 INDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICGLIALFNSL 129
Query: 207 CLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAF 266
L L+ T+ P L N + Y T G F + A V
Sbjct: 130 LLILYAKTLKGTP--------------------LLGNLSIGYLT----GSVFLFGASVFG 165
Query: 267 ITAFVTLFALVI---------AVTKDLPDVEGDRKFKISTLATKLGVKNIAFL 310
+ TLF L + + KD+ D+EGDR TL ++G K +L
Sbjct: 166 LEGLKTLFVLFLLAALAITAREIVKDIEDMEGDRLEDADTLPLRIGAKKAGYL 218
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 23/166 (13%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIV-AFNFGPFITSLYCLG 209
IN +D IDK+N+P P+ G LS A I +LI NF FI + LG
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFI---FALG 112
Query: 210 LFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITA 269
+L + + ++K L++AT+ G +G + L
Sbjct: 113 AYL--LMYLYARKLKPQPFIGNLVVATLTGITPIYGAIAVGKIGL-------------AG 157
Query: 270 FVTLFALVIAVT----KDLPDVEGDRKFKISTLATKLGVKNIAFLG 311
++ L A ++ V KD+ D+EGD+ TL G+++ + +G
Sbjct: 158 YLALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKIG 203
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 38.5 bits (88), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 38/215 (17%)
Query: 141 LICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGP 200
++CG +V N D +D +N+P+ I +G +S++ + L G I F G
Sbjct: 77 ILCGLSQVV--NDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALF-LGR 133
Query: 201 FITSLYCLGLFLGTIYSVPPFRMKRFA-VAAFLIIATVRGFLLNFGVYYATRAALG-LSF 258
+ LGL YS+ P R KR + L+ + G + A AA L+
Sbjct: 134 QVAFFVALGLVFALAYSLRPIRGKRNGWIGNALVAISYEGL-----AWMAGHAAFAPLTG 188
Query: 259 EWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFKISTL-------------ATKLGVK 305
E I +L A I D + GD I ++ T +GV
Sbjct: 189 E----SVTIALLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVA 244
Query: 306 NIAFLGSGLLLLNY--------VAAILAAIYMPQA 332
IA +G LL ++ VA +LAA +P A
Sbjct: 245 QIAVIG---LLFHWGHPVAATVVAILLAAQSIPNA 276
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 38.5 bits (88), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLYCLG- 209
IN +D+ IDK+N+P PI G ++ ++A++ + G LI+A G + L+ LG
Sbjct: 56 INDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIG-LIIALLLG-WSAFLFALGA 113
Query: 210 LFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITA 269
FL +Y+ +++K + +A + +G R L A I A
Sbjct: 114 YFLTFVYA---WKLKPLPFIGNVTVALLTAATPIYGAVGVGRIDL-------AGYLAICA 163
Query: 270 FVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
F L + + KD+ D EGD++ TL +G K + S
Sbjct: 164 F--LVNVSREIMKDIEDFEGDKRLGARTLPIMIGKKKSGIIAS 204
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSA----WFLVIFFAVTGLLIVAFNFGPFITSLY 206
IN +D ID +NKP PI +G +S+ +A + L I A+ G LI T +
Sbjct: 51 INDYFDYKIDLINKPQRPIPSGRISLDNAKNYAYLLFILAAIVGFLISCL----VDTWIP 106
Query: 207 C-LGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVA 265
C + +F I + +++K + L + + G F Y GL + +A
Sbjct: 107 CTIVIFSDIILYLYAYKLKSTPLIGNLTVGFMTGLCFIFAGYTFNE---GLIIYESYLLA 163
Query: 266 FITAFVTLFALVIA----VTKDLPDVEGD 290
F FAL++ +TKD+ D+EGD
Sbjct: 164 F-------FALIMTTAREITKDIEDMEGD 185
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 151 INQIYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLYCLGL 210
IN +D+ ID+VN+P PI G + + A + + + GL + F G L+ LG
Sbjct: 56 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARF-LG-VEALLFALGA 113
Query: 211 F-LGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRA-----ALGLSFEWNAPV 264
+ L IY+ +++K F+ N V T A ALG+ A
Sbjct: 114 YALTFIYA---WKLKPLP------------FIGNVAVALLTAATPIYGALGVGRVGLAGY 158
Query: 265 AFITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAFLGS 312
I AF L + + KD+ D+EGD K TL +G + A + S
Sbjct: 159 LAICAF--LVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMISS 204
>sp|A8A9J7|DGGGP_IGNH4 Digeranylgeranylglyceryl phosphate synthase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=Igni_0416 PE=3 SV=2
Length = 303
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 82/216 (37%), Gaps = 27/216 (12%)
Query: 94 ACWRFLRPHTIRGTALGSVALVARALIENPNLIKWSLLLKAFSGLLALICGNGYIVGINQ 153
A +R H + GT LG +A AL+ N+ A + N Y
Sbjct: 9 AYLELVRAHNLLGTVLGVIA--GAALLGEVNVAAAIASASAAAVAAGGYAINDY------ 60
Query: 154 IYDIGIDKVNKPYLPIAAGDLSVQSAWFLVIFFAVTGLLIVAFNFGPFITSLYCLGLFLG 213
+D+ IDKVNKP PI +G + + A L + ++ GP + L L
Sbjct: 61 -FDVEIDKVNKPERPIPSGRVGAEEARKLALALLAL-GPLLGLAVGPLTGAYAALNAVLM 118
Query: 214 TIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAF------I 267
YS +K+ + L ++ F + Y + A + EW VA I
Sbjct: 119 YYYSK---SLKKTGLPGNLAVS----FSTASTLLYGSLA----TAEWAGEVARVLRTIPI 167
Query: 268 TAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLG 303
V L L V K + D GD++ + TLA G
Sbjct: 168 ILMVFLMTLAREVVKGVEDYVGDKEGGVKTLAVVKG 203
>sp|P73962|MENA_SYNY3 Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=menA
PE=3 SV=1
Length = 307
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Query: 202 ITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWN 261
+ L + +FLG Y PPFR+ + + + T G L YY+ SF WN
Sbjct: 126 VLELIGVAIFLGYTYQGPPFRLGYLGLGELICLITF-GPLAIAAAYYSQSQ----SFSWN 180
Query: 262 --APVAF--ITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVK 305
P F I+ + LF +D D+ +K I L TKLG +
Sbjct: 181 LLTPSVFVGISTAIILFCSHFHQVED--DLAAGKKSPIVRLGTKLGSQ 226
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 143 CGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSA-----------WFLVIFFAVTGL 191
C G + IN I+DI ID++NKP P+ +G + + A L +F + L
Sbjct: 55 CAYGNV--INDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYAL 112
Query: 192 LIVAFNFGPFITSLYCLGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATR 251
+I N +L+ P + F II + G + FG
Sbjct: 113 IIAVIN------ALFLYLYAKKYKKYKP--------IGNF-IIGYLTGSVFLFG------ 151
Query: 252 AALGLSFEWNAPVA--FITAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLGVKNIAF 309
G++ + PV F+ + ++++ + KD D+EGD+K + +L K G K++ F
Sbjct: 152 ---GVAGKNVMPVVILFLCSLLSIWGR--EIVKDFEDMEGDKKEGVISLPIKYGKKSLYF 206
>sp|Q16QL3|COQ2_AEDAE 4-hydroxybenzoate polyprenyltransferase, mitochondrial OS=Aedes
aegypti GN=coq2 PE=3 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 151 INQIYDIGID-KVNKPY-LPIAAGDLSVQSAWFLVIFFAVTGLLI-VAFNFGPFITSLYC 207
IN ++D ID KV + P+ AG+L+ AWF + GLLI + N+ +
Sbjct: 174 INDMWDRDIDGKVARTRNRPLVAGELTSADAWFFLGAQLGVGLLILLELNWYSIVLGASS 233
Query: 208 LGLFLGTIYSVPPFRMKRFAVAAFLIIATVRGFLLNFGVYYATRAALGLSFEWNAPVAFI 267
LGL + IY + MKR L++ G N+G A G S W+A +
Sbjct: 234 LGLVI--IYPL----MKRITHWPQLVL----GMTFNWGALLGWSATQG-SVMWSACLPLY 282
Query: 268 TAFVTLFALVIAVTKDLPDVEGDRKFKISTLATKLG 303
A V + +V D D I + A + G
Sbjct: 283 VAGVC-WTIVYDTIYAHQDKVDDALLGIKSTAIRFG 317
>sp|A7GNP0|COXX1_BACCN Protoheme IX farnesyltransferase 1 OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=ctaB1 PE=3 SV=1
Length = 305
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 131 LLKAFSGLLALICGNGYIVGINQIYDIGIDKVNK--PYLPIAAGDLSVQSAWFLVIFFAV 188
+L AF G + +I G N +YD ID + + P GD+S ++A +L IF +
Sbjct: 56 ILFAFIGSILIIGAAG---AFNNLYDRDIDSIMERTKNRPTVTGDISPKTALWLGIFMTI 112
Query: 189 TGLLIVAFNFGPFITSLYCLGLFLGTIYSVPPFRM 223
GL+ +A T L + F+G V P+ M
Sbjct: 113 FGLVFLALT-----TYLAAILGFIGLFLYVVPYTM 142
>sp|Q54K99|UBIA1_DICDI UbiA prenyltransferase domain-containing protein 1 OS=Dictyostelium
discoideum GN=ubiad1 PE=3 SV=1
Length = 330
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 180 WFLVIFFAVT-GLLIVAF-NFGPFITSLYCLGLF---LGTIYSVPPFRMKRFAVAAFLII 234
W+L+I A+ GL+I N + ++ LG F L Y+ P +K + I
Sbjct: 129 WYLLIQCAICLGLMIFRMDNIKCIVENILPLGAFGFILNISYTAAPIGLKYIGLGDLTIF 188
Query: 235 ATVRGFLLNFGVYYATRAALGLSFEWNAPVAFITAFVTLFALVIAVTKDLPDVEGDRKFK 294
L+ T L++ ++ P+A L + + + D++ D +
Sbjct: 189 LCFGPILVQSAFISQTHYHDSLAYFYSIPLA-------LTIVAVLHVNNTRDIKADTEAG 241
Query: 295 ISTLATKLGVKNIAFLGSGLLLLNYV 320
TLA+KLG KN ++ +GL L Y+
Sbjct: 242 SITLASKLGFKNCYYIYAGLYLFAYI 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,178,545
Number of Sequences: 539616
Number of extensions: 4993633
Number of successful extensions: 14773
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 14678
Number of HSP's gapped (non-prelim): 109
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)