Query 017236
Match_columns 375
No_of_seqs 258 out of 1695
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 06:48:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017236.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017236hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02752 [acyl-carrier protein 100.0 5.6E-62 1.2E-66 461.0 35.4 313 63-375 31-343 (343)
2 PF00698 Acyl_transf_1: Acyl t 100.0 2.4E-60 5.2E-65 446.0 28.4 275 73-366 1-281 (318)
3 COG0331 FabD (acyl-carrier-pro 100.0 1.5E-59 3.3E-64 429.5 27.2 296 70-373 2-298 (310)
4 TIGR00128 fabD malonyl CoA-acy 100.0 3E-58 6.5E-63 427.3 33.7 287 71-367 2-289 (290)
5 TIGR03131 malonate_mdcH malona 100.0 9.8E-58 2.1E-62 424.4 32.1 284 72-373 1-284 (295)
6 smart00827 PKS_AT Acyl transfe 100.0 8.6E-55 1.9E-59 405.6 29.7 278 76-369 1-287 (298)
7 TIGR02813 omega_3_PfaA polyket 100.0 3.5E-54 7.7E-59 478.3 33.1 350 6-369 483-884 (2582)
8 TIGR02816 pfaB_fam PfaB family 100.0 1.4E-49 3E-54 387.4 29.0 275 68-368 179-490 (538)
9 KOG2926 Malonyl-CoA:ACP transa 100.0 9E-50 2E-54 353.6 21.3 301 68-370 60-365 (386)
10 COG3321 Polyketide synthase mo 100.0 3.3E-45 7.2E-50 385.3 23.3 349 4-368 442-813 (1061)
11 KOG1202 Animal-type fatty acid 100.0 3.4E-39 7.4E-44 320.5 18.0 332 8-366 437-785 (2376)
12 cd07198 Patatin Patatin-like p 90.9 0.86 1.9E-05 38.5 6.8 48 133-186 9-56 (172)
13 cd07205 Pat_PNPLA6_PNPLA7_NTE1 87.7 1.7 3.8E-05 36.7 6.4 48 134-187 12-59 (175)
14 cd07207 Pat_ExoU_VipD_like Exo 87.1 1.9 4.1E-05 37.0 6.4 48 134-187 11-58 (194)
15 cd07210 Pat_hypo_W_succinogene 86.1 2.5 5.4E-05 37.4 6.7 48 134-187 12-59 (221)
16 cd07209 Pat_hypo_Ecoli_Z1214_l 85.7 2.1 4.5E-05 37.7 6.0 39 134-178 10-48 (215)
17 cd07223 Pat_PNPLA5-mammals Pat 85.0 15 0.00032 35.3 11.4 57 131-189 18-74 (405)
18 COG1752 RssA Predicted esteras 84.9 2.6 5.5E-05 39.3 6.5 47 134-186 23-69 (306)
19 cd07227 Pat_Fungal_NTE1 Fungal 83.7 3.3 7.2E-05 37.8 6.4 45 134-184 22-66 (269)
20 cd07225 Pat_PNPLA6_PNPLA7 Pata 83.2 3.6 7.8E-05 38.4 6.6 48 134-187 27-74 (306)
21 cd07228 Pat_NTE_like_bacteria 83.1 3.5 7.5E-05 34.9 6.0 44 134-183 12-55 (175)
22 cd07229 Pat_TGL3_like Triacylg 83.0 3.5 7.6E-05 39.7 6.5 49 132-187 93-141 (391)
23 cd07224 Pat_like Patatin-like 81.3 8.7 0.00019 34.3 8.1 53 132-189 9-62 (233)
24 cd07204 Pat_PNPLA_like Patatin 79.2 47 0.001 29.7 12.8 53 133-187 10-62 (243)
25 cd07219 Pat_PNPLA1 Patatin-lik 79.0 9.8 0.00021 36.4 7.9 55 131-187 21-75 (382)
26 PRK10279 hypothetical protein; 77.7 3.6 7.9E-05 38.2 4.7 37 134-176 17-54 (300)
27 cd07218 Pat_iPLA2 Calcium-inde 76.8 9.1 0.0002 34.5 6.8 51 133-187 11-61 (245)
28 cd07231 Pat_SDP1-like Sugar-De 76.0 9.2 0.0002 35.7 6.7 48 132-186 78-125 (323)
29 cd07220 Pat_PNPLA2 Patatin-lik 75.1 16 0.00034 33.0 7.9 55 132-188 14-68 (249)
30 cd07221 Pat_PNPLA3 Patatin-lik 74.5 12 0.00026 33.9 7.0 54 133-188 11-64 (252)
31 cd07230 Pat_TGL4-5_like Triacy 71.4 10 0.00022 37.1 6.2 47 133-186 84-130 (421)
32 cd07232 Pat_PLPL Patain-like p 69.3 14 0.00031 35.9 6.7 47 134-187 79-125 (407)
33 cd07208 Pat_hypo_Ecoli_yjju_li 66.4 11 0.00023 34.3 5.0 39 134-178 10-49 (266)
34 PRK11126 2-succinyl-6-hydroxy- 66.2 7 0.00015 34.3 3.7 32 140-177 56-87 (242)
35 cd07212 Pat_PNPLA9 Patatin-lik 62.9 28 0.0006 32.6 7.1 75 136-222 13-88 (312)
36 cd07206 Pat_TGL3-4-5_SDP1 Tria 61.0 21 0.00045 33.1 5.7 39 132-176 79-117 (298)
37 cd07222 Pat_PNPLA4 Patatin-lik 60.1 43 0.00093 30.1 7.6 42 133-176 10-51 (246)
38 cd07213 Pat17_PNPLA8_PNPLA9_li 59.5 26 0.00057 32.2 6.3 54 135-190 15-68 (288)
39 cd07211 Pat_PNPLA8 Patatin-lik 58.4 38 0.00083 31.4 7.2 56 135-191 21-77 (308)
40 TIGR03695 menH_SHCHC 2-succiny 56.7 60 0.0013 27.7 7.9 21 156-176 70-90 (251)
41 PLN02824 hydrolase, alpha/beta 55.1 15 0.00032 33.6 3.8 30 140-175 92-121 (294)
42 TIGR01250 pro_imino_pep_2 prol 55.1 65 0.0014 28.4 8.1 21 156-176 96-116 (288)
43 TIGR03056 bchO_mg_che_rel puta 54.7 13 0.00027 33.3 3.2 28 142-175 87-114 (278)
44 TIGR02240 PHA_depoly_arom poly 54.6 15 0.00033 33.1 3.8 20 156-175 91-110 (276)
45 PF09752 DUF2048: Uncharacteri 53.9 34 0.00074 32.4 5.9 35 138-178 163-197 (348)
46 cd07217 Pat17_PNPLA8_PNPLA9_li 50.8 51 0.0011 31.3 6.7 84 156-240 41-132 (344)
47 PRK03592 haloalkane dehalogena 49.8 20 0.00044 32.7 3.8 30 140-175 83-112 (295)
48 PRK00870 haloalkane dehalogena 49.7 20 0.00043 32.9 3.8 29 140-174 105-133 (302)
49 PRK08775 homoserine O-acetyltr 49.5 20 0.00044 33.8 3.9 30 141-175 128-157 (343)
50 PRK13604 luxD acyl transferase 49.3 22 0.00047 33.2 3.9 20 156-175 108-127 (307)
51 PF12697 Abhydrolase_6: Alpha/ 49.2 25 0.00055 29.6 4.2 29 140-174 56-84 (228)
52 PRK11071 esterase YqiA; Provis 49.1 23 0.00049 30.3 3.8 21 156-176 61-81 (190)
53 cd07199 Pat17_PNPLA8_PNPLA9_li 47.3 73 0.0016 28.6 7.0 35 156-190 34-69 (258)
54 COG1054 Predicted sulfurtransf 47.0 47 0.001 30.6 5.5 62 210-273 17-78 (308)
55 PF06821 Ser_hydrolase: Serine 46.1 18 0.0004 30.4 2.7 19 156-174 55-73 (171)
56 PF03958 Secretin_N: Bacterial 45.9 69 0.0015 22.8 5.5 32 230-261 44-75 (82)
57 TIGR03101 hydr2_PEP hydrolase, 45.3 30 0.00066 31.5 4.1 29 141-175 90-118 (266)
58 PLN02965 Probable pheophorbida 44.9 23 0.0005 31.6 3.3 19 156-174 72-90 (255)
59 PRK06765 homoserine O-acetyltr 44.8 28 0.00061 33.7 4.1 30 140-174 150-179 (389)
60 PF01764 Lipase_3: Lipase (cla 43.7 19 0.00042 28.6 2.4 16 159-174 67-82 (140)
61 COG3208 GrsT Predicted thioest 42.1 45 0.00097 29.9 4.5 15 156-170 74-88 (244)
62 PLN02679 hydrolase, alpha/beta 41.9 31 0.00067 32.8 3.8 28 141-174 146-173 (360)
63 TIGR03343 biphenyl_bphD 2-hydr 41.1 27 0.0006 31.3 3.3 28 142-175 93-120 (282)
64 PLN02578 hydrolase 39.6 35 0.00076 32.3 3.8 20 156-175 152-171 (354)
65 PF07819 PGAP1: PGAP1-like pro 39.6 23 0.00049 31.4 2.3 20 156-175 85-104 (225)
66 TIGR01392 homoserO_Ac_trn homo 39.3 36 0.00077 32.2 3.8 29 141-175 117-146 (351)
67 PRK10349 carboxylesterase BioH 38.9 38 0.00083 30.0 3.8 20 156-175 74-93 (256)
68 PRK10673 acyl-CoA esterase; Pr 38.8 37 0.00079 29.9 3.7 21 156-176 81-101 (255)
69 PF03190 Thioredox_DsbH: Prote 38.1 30 0.00065 29.0 2.7 48 320-367 9-62 (163)
70 PF06259 Abhydrolase_8: Alpha/ 37.3 2.6E+02 0.0056 23.7 9.1 20 70-89 19-38 (177)
71 PF00561 Abhydrolase_1: alpha/ 37.0 50 0.0011 28.2 4.1 19 156-174 44-62 (230)
72 PF03959 FSH1: Serine hydrolas 36.7 42 0.00092 29.2 3.6 28 140-174 93-120 (212)
73 TIGR02427 protocat_pcaD 3-oxoa 36.4 38 0.00082 29.1 3.3 21 156-176 79-99 (251)
74 PRK07581 hypothetical protein; 35.3 45 0.00097 31.2 3.8 21 156-176 123-144 (339)
75 cd01819 Patatin_and_cPLA2 Pata 35.3 74 0.0016 26.1 4.7 36 135-174 11-46 (155)
76 TIGR03611 RutD pyrimidine util 35.3 45 0.00098 28.9 3.7 21 156-176 80-100 (257)
77 cd00741 Lipase Lipase. Lipase 33.7 34 0.00073 27.9 2.4 16 159-174 31-46 (153)
78 cd07214 Pat17_isozyme_like Pat 33.5 1.5E+02 0.0032 28.3 6.9 81 156-239 43-142 (349)
79 PLN02894 hydrolase, alpha/beta 33.4 52 0.0011 31.9 4.0 20 156-175 176-195 (402)
80 PLN02211 methyl indole-3-aceta 33.2 50 0.0011 30.0 3.6 20 156-175 87-106 (273)
81 COG4188 Predicted dienelactone 33.0 37 0.00079 32.3 2.7 31 156-186 159-189 (365)
82 cd00519 Lipase_3 Lipase (class 32.9 33 0.00071 30.2 2.3 17 158-174 130-146 (229)
83 cd07216 Pat17_PNPLA8_PNPLA9_li 32.8 1.3E+02 0.0029 27.8 6.5 37 157-193 43-80 (309)
84 PRK00175 metX homoserine O-ace 32.4 55 0.0012 31.4 3.9 30 141-176 137-167 (379)
85 PRK06489 hypothetical protein; 30.6 75 0.0016 30.1 4.5 19 158-176 156-174 (360)
86 PLN03090 auxin-responsive fami 29.5 1.2E+02 0.0025 23.4 4.4 40 71-110 43-82 (104)
87 PF12695 Abhydrolase_5: Alpha/ 29.0 48 0.001 26.1 2.5 20 156-175 61-80 (145)
88 TIGR01738 bioH putative pimelo 29.0 45 0.00098 28.5 2.5 20 156-175 65-84 (245)
89 KOG4409 Predicted hydrolase/ac 29.0 37 0.0008 32.1 2.0 19 156-174 160-178 (365)
90 PF02519 Auxin_inducible: Auxi 28.9 1.1E+02 0.0024 23.2 4.3 41 70-110 38-78 (100)
91 PRK14875 acetoin dehydrogenase 28.8 66 0.0014 30.3 3.8 20 156-175 197-216 (371)
92 cd00707 Pancreat_lipase_like P 28.4 43 0.00094 30.6 2.3 21 156-176 112-132 (275)
93 KOG2564 Predicted acetyltransf 28.2 20 0.00043 32.9 0.0 25 156-180 146-170 (343)
94 PLN02733 phosphatidylcholine-s 27.9 69 0.0015 31.6 3.7 20 156-175 162-181 (440)
95 PF00326 Peptidase_S9: Prolyl 27.8 70 0.0015 27.5 3.5 17 159-175 67-83 (213)
96 KOG2551 Phospholipase/carboxyh 27.7 61 0.0013 28.6 2.9 29 140-175 95-123 (230)
97 COG0596 MhpC Predicted hydrola 27.7 62 0.0013 27.5 3.2 20 156-175 88-107 (282)
98 PF05798 Phage_FRD3: Bacteriop 27.4 1.9E+02 0.0042 20.1 4.7 42 210-257 9-54 (75)
99 COG1331 Highly conserved prote 27.0 72 0.0016 32.9 3.7 36 320-355 15-54 (667)
100 PF00975 Thioesterase: Thioest 26.7 57 0.0012 28.3 2.8 18 157-174 67-84 (229)
101 PRK05855 short chain dehydroge 26.7 90 0.002 31.4 4.6 21 156-176 94-114 (582)
102 COG0030 KsgA Dimethyladenosine 26.5 77 0.0017 28.8 3.5 20 344-363 30-50 (259)
103 PHA02857 monoglyceride lipase; 26.4 49 0.0011 29.7 2.3 20 156-175 97-116 (276)
104 PF00756 Esterase: Putative es 26.3 51 0.0011 29.1 2.4 17 158-174 117-133 (251)
105 PRK04940 hypothetical protein; 26.3 60 0.0013 27.7 2.6 19 156-174 60-78 (180)
106 PLN03219 uncharacterized prote 26.1 1.7E+02 0.0037 22.6 4.7 40 71-110 42-83 (108)
107 PF05728 UPF0227: Uncharacteri 25.9 1E+02 0.0022 26.4 4.1 17 158-174 61-77 (187)
108 PF10230 DUF2305: Uncharacteri 25.5 46 0.00099 30.3 1.9 22 157-178 85-106 (266)
109 TIGR03100 hydr1_PEP hydrolase, 25.3 92 0.002 28.2 3.9 18 157-174 101-118 (274)
110 PRK05320 rhodanese superfamily 25.0 1.9E+02 0.0041 26.2 5.8 49 211-261 16-64 (257)
111 PF12000 Glyco_trans_4_3: Gkyc 24.9 60 0.0013 27.4 2.4 18 142-165 58-75 (171)
112 PF11288 DUF3089: Protein of u 23.9 90 0.0019 27.3 3.3 14 156-169 95-108 (207)
113 PLN02298 hydrolase, alpha/beta 23.7 53 0.0011 30.5 2.1 18 157-174 135-152 (330)
114 PRK03204 haloalkane dehalogena 23.5 88 0.0019 28.5 3.5 19 156-174 101-119 (286)
115 PF00398 RrnaAD: Ribosomal RNA 23.4 91 0.002 28.2 3.5 22 344-365 30-52 (262)
116 TIGR01249 pro_imino_pep_1 prol 23.4 99 0.0021 28.4 3.8 21 156-176 95-115 (306)
117 PLN02385 hydrolase; alpha/beta 23.4 56 0.0012 30.8 2.2 18 157-174 163-180 (349)
118 PF11187 DUF2974: Protein of u 23.3 59 0.0013 28.8 2.2 24 156-179 84-107 (224)
119 PRK10566 esterase; Provisional 23.1 51 0.0011 29.0 1.8 18 157-174 108-125 (249)
120 PLN03087 BODYGUARD 1 domain co 22.4 91 0.002 31.1 3.5 20 156-175 274-293 (481)
121 PLN00215 predicted protein; Pr 22.1 37 0.0008 24.4 0.5 14 71-84 53-66 (110)
122 PRK10749 lysophospholipase L2; 22.0 69 0.0015 29.9 2.5 19 156-174 131-149 (330)
123 cd07215 Pat17_PNPLA8_PNPLA9_li 22.0 1.5E+02 0.0032 27.9 4.7 86 156-241 40-138 (329)
124 KOG1454 Predicted hydrolase/ac 21.9 98 0.0021 29.1 3.4 21 156-176 128-148 (326)
125 PF01734 Patatin: Patatin-like 21.9 67 0.0015 26.5 2.2 26 156-181 27-52 (204)
126 PF05677 DUF818: Chlamydia CHL 21.5 4.9E+02 0.011 24.8 7.7 94 68-173 135-232 (365)
127 TIGR03607 patatin-related prot 21.2 1.7E+02 0.0036 31.0 5.2 20 156-175 66-85 (739)
128 PLN03220 uncharacterized prote 21.2 2.5E+02 0.0054 21.6 4.8 21 90-110 61-81 (105)
129 cd04436 DEP_fRgd2 DEP (Disheve 21.0 2.1E+02 0.0046 21.0 4.2 42 286-329 4-45 (84)
130 cd02394 vigilin_like_KH K homo 20.6 1.6E+02 0.0035 19.6 3.5 20 239-258 41-60 (62)
131 PRK01415 hypothetical protein; 20.5 2.7E+02 0.0058 25.1 5.8 49 212-262 19-67 (247)
132 COG1877 OtsB Trehalose-6-phosp 20.4 3.8E+02 0.0082 24.5 6.7 86 198-291 54-153 (266)
133 KOG3724 Negative regulator of 20.4 68 0.0015 33.8 2.1 20 158-177 184-203 (973)
134 COG2267 PldB Lysophospholipase 20.4 75 0.0016 29.4 2.3 19 156-174 107-125 (298)
135 PLN00021 chlorophyllase 20.3 62 0.0013 30.2 1.8 20 158-177 128-147 (313)
136 KOG3847 Phospholipase A2 (plat 20.2 38 0.00082 31.6 0.3 19 158-176 243-261 (399)
No 1
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=100.00 E-value=5.6e-62 Score=461.01 Aligned_cols=313 Identities=81% Similarity=1.201 Sum_probs=285.1
Q ss_pred ccccCCCCcEEEEecCCCccccccchhhhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHH
Q 017236 63 ALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVE 142 (375)
Q Consensus 63 ~~~~~~~~~~~fvF~GqG~q~~~m~~~l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~ 142 (375)
......+++++|+|||||+||++|+++|.++|.|++.+++|++.+|+++.+++.+.+.+.+.++.++||+||++|+++++
T Consensus 31 ~~~~~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~ 110 (343)
T PLN02752 31 ALFADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVE 110 (343)
T ss_pred ccccCCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHH
Confidence 55667788999999999999999999998999999999999999999999998877766788899999999999999999
Q ss_pred HHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHh
Q 017236 143 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAA 222 (375)
Q Consensus 143 ~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~ 222 (375)
+|+++|.+..++.+|++++|||+|||+|++++|+++++++++++..|+++|+......+++|++|.+.+.++++++++.+
T Consensus 111 ~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~ 190 (343)
T PLN02752 111 KLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAA 190 (343)
T ss_pred HHHhcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHh
Confidence 99999833322235789999999999999999999999999999999999988655578999999899999999999988
Q ss_pred ccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCc
Q 017236 223 NQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRM 302 (375)
Q Consensus 223 ~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~i 302 (375)
+...+....++|+++|+|+++||||+++.++++.+.++..+.++.++|++++|||||+|+++.+.+.+.++.+.+++|++
T Consensus 191 ~~~~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~~pfHsp~m~~~~~~l~~~l~~~~~~~p~i 270 (343)
T PLN02752 191 NEEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVDALEAALAAVEIRTPRI 270 (343)
T ss_pred hhccCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 76544456899999999999999999999999999888776667889999999999999999999999999999999999
Q ss_pred eEEEcCCCCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCcceeccC
Q 017236 303 PVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIGA 375 (375)
Q Consensus 303 pv~S~~~g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~~~~~~~~~~ 375 (375)
|+||+++|+++.+.+.+++||.+++++||+|.++++.+.+.|++.|||+||+++|+++++++.++....++.|
T Consensus 271 pviS~~tg~~~~~~~~~~~~l~~~l~~PV~~~~~i~~l~~~g~~~~iEiGP~~~L~~l~~~~~~~~~~~~~~~ 343 (343)
T PLN02752 271 PVISNVDAQPHSDPATIKKILARQVTSPVQWETTVKTLLEKGLEKSYELGPGKVIAGIVKRVDKGAKIENVTV 343 (343)
T ss_pred eEEEcCCCCccCChHHHHHHHHHHCcCCEEHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHhhCCCceeeccC
Confidence 9999999999988888899999999999999999999999999999999999999999999988777776643
No 2
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=100.00 E-value=2.4e-60 Score=446.02 Aligned_cols=275 Identities=40% Similarity=0.646 Sum_probs=248.0
Q ss_pred EEEecCCCccccccchh-hhccHHHHHHHHHHhhhc----CCChHHHhhcCCC-CcccccccchhHHHHHHHHHHHHHHH
Q 017236 73 AFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPK-EKLDSTIISQPAIYVTSLAAVELLRA 146 (375)
Q Consensus 73 ~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~l----g~~l~~~~~~~~~-~~~~~~~~~q~~i~~~q~al~~~l~~ 146 (375)
+|+|||||+||++||++ |..+|.|++.+++|++.+ |+++.+++.+++. ..+.++.++||+||++|+|++++|++
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~~al~~~l~~ 80 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQVALARLLRS 80 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhhhhhhhhhcc
Confidence 69999999999999999 578899999999999874 8999999987764 67888999999999999999999999
Q ss_pred hcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhcccc
Q 017236 147 RDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEV 226 (375)
Q Consensus 147 ~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~ 226 (375)
+| + +|++++|||+||++|++++|+++++|++++++.|+++|++.. .+|.|++|.+ ++.+..+.
T Consensus 81 ~G-----i-~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~--~~g~m~av~~---~~~~~~~~------ 143 (318)
T PF00698_consen 81 WG-----I-KPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAA--PPGAMLAVRG---EEEEEKLA------ 143 (318)
T ss_dssp TT-----H-CESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHS--TSEEEEEEES---HHHHHHHH------
T ss_pred cc-----c-ccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhh--hcccccchhh---hHHhhhcc------
Confidence 98 6 999999999999999999999999999999999999999874 7889999955 33333332
Q ss_pred CCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEEE
Q 017236 227 DEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVIS 306 (375)
Q Consensus 227 ~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S 306 (375)
..++++||++|+|+++||||++++++++.+.+++.+ .+.+.|++++|||||+|+++.++|++.+..+.+++|++|+||
T Consensus 144 -~~~~v~ia~~Ns~~q~visG~~~~l~~~~~~l~~~~-~~~~~l~v~~afHs~~m~~~~~~~~~~l~~~~~~~p~ip~~S 221 (318)
T PF00698_consen 144 -LPPDVEIANINSPRQVVISGEREALEALVERLKAEG-IKAKRLPVSYAFHSPLMEPAADEFREALESIEFRPPKIPVYS 221 (318)
T ss_dssp -TTTTEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTT-SEEEEESSSSETTSGGGHHHHHHHHHHHHTSCSCCCSSEEEE
T ss_pred -ccccceeeeeccccccccCCCHHHHHHHHHHhhccc-eeEEEeeeeccccCchhhhhHHHHHhhhhcccccccccccee
Confidence 167899999999999999999999999999999977 458899999999999999999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcC
Q 017236 307 NVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDK 366 (375)
Q Consensus 307 ~~~g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~ 366 (375)
+++|+.+.+.+...+||.+|+++||+|.++++++.+.|+++||||||+++|+++++++++
T Consensus 222 ~~~g~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fiEiGP~~~L~~~~~~~l~ 281 (318)
T PF00698_consen 222 NVTGRPYDDPELIAEYWARQLRSPVRFREAVEALYEDGVRVFIEIGPGSVLTSLVKRILK 281 (318)
T ss_dssp TTTSSBEHSHHHHHHHHHHHHHSHEEHHHHHHHHHHTTEEEEEEESSSSHHHHHHHHHST
T ss_pred ecccccccccccchhHHHhccCCcCChHHHHHHHHhcCCCEEEEeCchHHHHHHHHHHHh
Confidence 999999977777899999999999999999999999999999999999999999999998
No 3
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=100.00 E-value=1.5e-59 Score=429.55 Aligned_cols=296 Identities=44% Similarity=0.738 Sum_probs=279.2
Q ss_pred CcEEEEecCCCccccccchh-hhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHHHhc
Q 017236 70 PTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARD 148 (375)
Q Consensus 70 ~~~~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~~~g 148 (375)
++++|+|||||+||.|||++ +.++|.+++.++++++.+++++.+++.+++++.+..+.++||++++++++.++.|.+.+
T Consensus 2 ~~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l~~~l~~i~~~~p~~~L~~T~~tQPal~~~s~a~~~~l~~~~ 81 (310)
T COG0331 2 SKTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEALGFDLWALVFEGPEEELNLTQNTQPALLLVSLAAYRVLAEQG 81 (310)
T ss_pred CcceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHhcccHHHHhcCCCHHHhcccchhhHHHHHHHHHHHHHHHHhc
Confidence 47899999999999999999 68899999999999999999999999998888999999999999999999999999976
Q ss_pred CCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccCC
Q 017236 149 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 228 (375)
Q Consensus 149 ~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~ 228 (375)
.+ . +|+++.|||+|||+|++++|+++++|+++++..||.+|++....+.++|.+|.|++.++++++|++.+.
T Consensus 82 ~~---~-~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~---- 153 (310)
T COG0331 82 LG---V-KPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQ---- 153 (310)
T ss_pred CC---C-CCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhcc----
Confidence 32 3 899999999999999999999999999999999999999988777899999999999999999998754
Q ss_pred CCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEEEcC
Q 017236 229 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNV 308 (375)
Q Consensus 229 ~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~ 308 (375)
...++|+++|+|.|+||||++++|+++.+.+++.+.++..+|++++||||++|+|+.++|...+....+++|.+|++||+
T Consensus 154 ~~~v~iaN~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~vs~pfHs~lm~pa~~~~~~~l~~~~~~~~~ipvi~n~ 233 (310)
T COG0331 154 GTVVEIANYNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPVSGPFHSPLMKPAADELAEALEKVRFSDPLVPVISNV 233 (310)
T ss_pred CCeEEEeeeCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCCCchhhhhhhHHHHHHHHHHHHhcCCCCccceeeecc
Confidence 23799999999999999999999999999999988777778999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCcceec
Q 017236 309 DAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 373 (375)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~~~~~~~~ 373 (375)
+++...+.+.+++.+.+|+.+||+|.++++.+.+.|++.|+|+||+.+|+++++++.++..+..+
T Consensus 234 ~~~~~~~~~~i~~~L~~q~~~pVrW~etv~~l~~~gv~~~~EiGpg~vL~gL~kri~~~~~~~~~ 298 (310)
T COG0331 234 DAKPVLDGEEIRELLAKQLTSPVRWTETVETLKADGVTRFVEIGPGKVLTGLAKRILKGLGVRAV 298 (310)
T ss_pred ccccccCHHHHHHHHHHHhcCCeeHHHHHHHHHhcCceEEEEeCCcHHHHHHHHhhcCCCCceec
Confidence 99998899999999999999999999999999999999999999999999999999998877654
No 4
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=100.00 E-value=3e-58 Score=427.28 Aligned_cols=287 Identities=45% Similarity=0.794 Sum_probs=264.9
Q ss_pred cEEEEecCCCccccccchh-hhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHHHhcC
Q 017236 71 TNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDG 149 (375)
Q Consensus 71 ~~~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~~~g~ 149 (375)
+++|+|+|||+||++|+++ |..+|.||+.+++|++++|+++.+++.+.+.+.++++.+.|+++|++|++++++|+++|
T Consensus 2 ~~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~~~~~al~~~l~~~g- 80 (290)
T TIGR00128 2 KIAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEALGYDLKKLCQEGPAEELNKTQYTQPALYVVSAILYLKLKEQG- 80 (290)
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHhCcCHHHHHhCCCHHHhccccchhHHHHHHHHHHHHHHHHcC-
Confidence 6899999999999999999 57899999999999999999999998866666678889999999999999999999997
Q ss_pred CCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccCCC
Q 017236 150 GQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDED 229 (375)
Q Consensus 150 ~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~ 229 (375)
+ + .|++++|||+|||+|++++|++|++|++++++.|+++|++......|.|+++.+.+.+++++.++.++ .
T Consensus 81 ~---i-~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~-----~ 151 (290)
T TIGR00128 81 G---L-KPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEAT-----E 151 (290)
T ss_pred C---C-CCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcC-----C
Confidence 2 3 79999999999999999999999999999999999999987544578899888999999999998753 1
Q ss_pred CceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEEEcCC
Q 017236 230 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVD 309 (375)
Q Consensus 230 ~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~~ 309 (375)
..++|+++|+|+++||||+++.++++.+.++..+..+.++|+++.|||||+|+++.+++.+.+..+.+++|++|++|+++
T Consensus 152 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~l~~~~~~~~~~l~~~~~~~p~ipi~S~~~ 231 (290)
T TIGR00128 152 NDVDLANFNSPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEVSGAFHSRFMKPAAEKFAETLEACQFNDPTVPVISNVD 231 (290)
T ss_pred CcEEEEEECCCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCccEEECCC
Confidence 46899999999999999999999999999887666567889999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCC
Q 017236 310 AQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKS 367 (375)
Q Consensus 310 g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~~ 367 (375)
|+.+...+.+++||.+++++||+|.++++.+.+.|+++|||+||+++|++++++++++
T Consensus 232 g~~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~g~~~~ie~gp~~~l~~~~~~~~~~ 289 (290)
T TIGR00128 232 AKPYTNGDRIKEKLSEQLTSPVRWTDSVEKLMARGVTEFAEVGPGKVLTGLIKRIKND 289 (290)
T ss_pred CCccCCHHHHHHHHHHHccCCccHHHHHHHHHHCCCCEEEEECCchHHHHHHHHhcCC
Confidence 9998877788999999999999999999999999999999999999999999998765
No 5
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=100.00 E-value=9.8e-58 Score=424.39 Aligned_cols=284 Identities=33% Similarity=0.477 Sum_probs=262.2
Q ss_pred EEEEecCCCccccccchhhhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHHHhcCCC
Q 017236 72 NAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQ 151 (375)
Q Consensus 72 ~~fvF~GqG~q~~~m~~~l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~~~g~~~ 151 (375)
++|+|||||+||++|+++|..+|.||+.+++|++.+++++.++ . +.+.+.++.++||++|++|++++++|+++|
T Consensus 1 ~~~~F~GqG~q~~~m~~~l~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~l~~~~~~qp~i~~~q~al~~~l~~~g--- 74 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAELPDHPAVAAVLAEASDVLGIDPREL-D--DAEALASTRSAQLCILAAGVAAWRALLALL--- 74 (295)
T ss_pred CEEEECCcchhhhhHHHHHHhCHHHHHHHHHHHHHhCcCHHHc-C--CHhhhccchhhhHHHHHHHHHHHHHHHhcC---
Confidence 5799999999999999998788999999999999999999884 2 334567889999999999999999999998
Q ss_pred CcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccCCCCc
Q 017236 152 QIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNK 231 (375)
Q Consensus 152 ~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~ 231 (375)
+ +|++++|||+||++|++++|+++++|++++++.|+++|+... ...++|++|.+.+.++++++++.+ .
T Consensus 75 --~-~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~-~~~~~m~av~~~~~~~~~~~l~~~--------~ 142 (295)
T TIGR03131 75 --P-RPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAV-PGGYGMLAVLGLDLAAVEALIAKH--------G 142 (295)
T ss_pred --C-CCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhc-CCCCCEEEEeCCCHHHHHHHHHHc--------C
Confidence 6 899999999999999999999999999999999999998753 345679888899999999999753 3
Q ss_pred eEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEEEcCCCC
Q 017236 232 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQ 311 (375)
Q Consensus 232 v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~~g~ 311 (375)
++|+++|+|+++||||+++.++++.+.++..+..+.++|++++|||||+|+++.+++.+.+..+.+++|++|+||+++|+
T Consensus 143 v~ia~~Nsp~~~visG~~~~l~~l~~~l~~~g~~~~~~l~v~~afHs~~~~~~~~~~~~~l~~~~~~~~~ip~~S~~~g~ 222 (295)
T TIGR03131 143 VYLAIINAPDQVVIAGSRAALRAVAELARAAGASRAKRLAVRVPSHTPLLAKAAEQFAEALAEIPLAAPRLPYLSGIDAR 222 (295)
T ss_pred EEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCceEEECCCCe
Confidence 89999999999999999999999999998877656889999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCcceec
Q 017236 312 PHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 373 (375)
Q Consensus 312 ~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~~~~~~~~ 373 (375)
.+.+.+.+++||.+++++||+|.++++.+.+.|+++|||+||+++|++++++++++..+.++
T Consensus 223 ~~~~~~~~~~~~~~~l~~pV~~~~~i~~l~~~g~~~~veiGp~~~l~~~~~~~~~~~~~~~~ 284 (295)
T TIGR03131 223 LVRDAAQIRDDLARQIATPVDWHDCMQAAYERGARLVIELGPGDVLTKLANEAFPELPARSA 284 (295)
T ss_pred ecCCHHHHHHHHHHHhcCCCcHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHhcCCCcEEec
Confidence 99888888999999999999999999999999999999999999999999999988877665
No 6
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=100.00 E-value=8.6e-55 Score=405.61 Aligned_cols=278 Identities=30% Similarity=0.490 Sum_probs=255.2
Q ss_pred ecCCCccccccchhh-hccHHHHHHHHHHhhhc----CCChHHHhhcCCC--CcccccccchhHHHHHHHHHHHHHHHhc
Q 017236 76 FPGQGAQAVGMGKEA-QSVPAAAELYKKANDIL----GFDLLEICTNGPK--EKLDSTIISQPAIYVTSLAAVELLRARD 148 (375)
Q Consensus 76 F~GqG~q~~~m~~~l-~~~p~~r~~~~~~~~~l----g~~l~~~~~~~~~--~~~~~~~~~q~~i~~~q~al~~~l~~~g 148 (375)
|||||+||++|++++ ..+|.|++.+++|++++ |+++.+++.+.+. ..+.++.++||++|++|++++++|+++|
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~~a~~~~l~~~G 80 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQVALARLWRSWG 80 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHHHHHHHHHHHcC
Confidence 899999999999995 68999999999999986 9999999876442 3467889999999999999999999998
Q ss_pred CCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccCC
Q 017236 149 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDE 228 (375)
Q Consensus 149 ~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~ 228 (375)
+ +|++++|||+||++|++++|+++++|+++++..|+.+|++.. .+|.|++| +.+.++++++++.+
T Consensus 81 -----i-~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~~--~~g~m~av-~~~~~~~~~~l~~~------ 145 (298)
T smart00827 81 -----V-RPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQALP--GGGAMLAV-GLSEEEVEELLAGY------ 145 (298)
T ss_pred -----C-cccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcC--CCCeEEEE-eCCHHHHHHHHHhc------
Confidence 6 899999999999999999999999999999999999999864 56899999 99999999999875
Q ss_pred CCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEEEcC
Q 017236 229 DNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNV 308 (375)
Q Consensus 229 ~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~ 308 (375)
...++|+++|+|++++|+|+++.++++.+.++..+. +.++|++.+|||||+|+++.+++++.++.+.+.+|++|+||++
T Consensus 146 ~~~~~ia~~ns~~~~visG~~~~l~~l~~~l~~~~~-~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~~~~pv~S~~ 224 (298)
T smart00827 146 GGRVSVAAVNGPSSVVLSGDEDAVDELAAALEARGI-RARRLKVDHAFHSPHMDPILDEFREALAGITPRPPRIPFVSTV 224 (298)
T ss_pred CCcEEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCc-eEEECCCCCCCchHHHHHHHHHHHHHHhhCCCCCCCCcEEeCC
Confidence 356999999999999999999999999999987554 5789999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHH-HHHHHHHhcCcccHHHHHHHHHH-CCCCEEEEECCChhHHHHHHHhcCCCc
Q 017236 309 DAQPHADPEVI-KKILAQQVTSPVQWETTVKTLLG-KGLKKSYELGPGKVIAGIVKRLDKSAE 369 (375)
Q Consensus 309 ~g~~~~~~~~~-~~~~~~~l~~pV~f~~av~~l~~-~g~~~~ieiGP~~~l~~~i~~~l~~~~ 369 (375)
+|+++.+.+.. +++|.+++++||+|.++++.+.+ .|.++|||+||+++|++++++++++..
T Consensus 225 ~g~~~~~~~~~~~~~l~~~l~~pV~~~~~i~~l~~~~g~~~~ie~Gp~~~l~~~~~~~~~~~~ 287 (298)
T smart00827 225 TGELIDGAELDDAEYWVRNLREPVRFADAVRALLAEQGVTVFLEVGPHPVLTGPIKQTLPAAG 287 (298)
T ss_pred CCcccCCCCCCCHHHHHHHhhccEeHHHHHHHHHHcCCCcEEEEeCCcHHHHHHHHHHHhccC
Confidence 99998766555 89999999999999999999996 699999999999999999999998753
No 7
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=3.5e-54 Score=478.34 Aligned_cols=350 Identities=25% Similarity=0.311 Sum_probs=290.0
Q ss_pred ccccChHHHHHHHHhhhhhhccCcc----chhhh-----hcccCCCCcceEEEeecccccccccC---------------
Q 017236 6 SLAFSSSSLHNRYHKRTTFFNGSAA----SFNRI-----GVRRSLARSGVFMSVSVGKHTAVTVD--------------- 61 (375)
Q Consensus 6 ~~a~s~~~l~~~~~~~~~~l~~~~~----~~~~~-----~~~r~~~~~r~~~~~~~~~~~~~~~~--------------- 61 (375)
--|+|.++|++.++.+.+++..... .+.++ ...+.++++|.++++.+.++....+.
T Consensus 483 lSA~~~~aL~~~l~~~~~~l~~~~~~~~~~~~~la~~~t~~~~~~~~~R~a~va~~~~el~~~L~~a~~~l~~~~~~~~~ 562 (2582)
T TIGR02813 483 FTAANEKALVSSLKDWKNKLSAKADDQPYAFNALAVENTLRTIAVALARLGFVAKNADELITMLEQAITQLEAKSCEEWQ 562 (2582)
T ss_pred ecCCCHHHHHHHHHHHHHHHhcccccccccHHHHHHHhhhcccccCCceEEEEECCHHHHHHHHHHHHHhhhcccccccc
Confidence 4588999999999999888865432 23221 23345678998888876543211110
Q ss_pred --cc--cc----cCCCCcEEEEecCCCccccccchh-hhccHHHHHHHHHHhhhcC----CChHHHhhcC----------
Q 017236 62 --DA--LF----ADYKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILG----FDLLEICTNG---------- 118 (375)
Q Consensus 62 --~~--~~----~~~~~~~~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~lg----~~l~~~~~~~---------- 118 (375)
.. .. ....++++|+|||||+||++||++ |..+|.||+.+++|+++++ .++.++++..
T Consensus 563 ~~~g~~~~~~~~~~~~~kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~~~~ 642 (2582)
T TIGR02813 563 LPSGISYRKSALVVESGKVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDESRKA 642 (2582)
T ss_pred ccccccccccccccCCCceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhccccccccccccc
Confidence 00 00 013568999999999999999999 5789999999999999874 4566665421
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhh
Q 017236 119 PKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD 198 (375)
Q Consensus 119 ~~~~~~~~~~~q~~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~ 198 (375)
....+.++.++||+||++|++++++|+++| + +|++++|||+|||+|+|++|+++++|++++++.||++|.+...
T Consensus 643 ~~~~L~~t~~aQPaI~a~q~Al~~lL~~~G-----i-~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~ 716 (2582)
T TIGR02813 643 QEEALTNTQHAQSAIGTLSMGQYKLFTQAG-----F-KADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTG 716 (2582)
T ss_pred hhhhhccchhHHHHHHHHHHHHHHHHHHcC-----C-ccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhccc
Confidence 123467889999999999999999999998 6 8999999999999999999999999999999999999987643
Q ss_pred c-CCCeEEEEecC---CHHHHHHHHHHhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCC
Q 017236 199 A-AKGAMVSIIGL---DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAG 274 (375)
Q Consensus 199 ~-~~g~m~av~~~---~~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~ 274 (375)
. ..|+|+++... +.+.+++.+.. .+.++|+|+|+|+++||||+.+.++++.+.+++.+. ++++|+|++
T Consensus 717 ~~~~G~M~AV~l~~~~~~~~v~~~l~~-------~~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi-~a~~L~Vs~ 788 (2582)
T TIGR02813 717 EADIGFMYAVILAVVGSPTVIANCIKD-------FEGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGF-KAIPLPVSG 788 (2582)
T ss_pred CCCCceeEEEEccccccHHHHHHHhcc-------CCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCC-eEEECCCCC
Confidence 2 36899998422 34556655543 357999999999999999999999999999998665 589999999
Q ss_pred CCCccchHHHHHHHHHHHhcCCCCCCCceEEEcCCCCCCC-ChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECC
Q 017236 275 AFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHA-DPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGP 353 (375)
Q Consensus 275 ~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~~g~~~~-~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP 353 (375)
+||||+|+++.++|++.++.+.+++|++|||||+||+++. +.+.+++||.+|+++||+|.++++++.+.|.++|||+||
T Consensus 789 AFHSplm~~a~~~f~~~L~~i~~~~P~ipv~SnvtG~~~~~~~~~i~~~~~~ql~~PV~F~~aIe~l~~~G~~~FVEiGP 868 (2582)
T TIGR02813 789 AFHTPLVAHAQKPFSAAIDKAKFNTPLVPLYSNGTGKLHSNDAAAIKKALKNHMLQSVHFSEQLEAMYAAGARVFVEFGP 868 (2582)
T ss_pred CcCcHHHHHHHHHHHHHHhhCCCCCCCceEEECCCCeEecCchhhHHHHHHHHhhCeecHHHHHHHHHHCCCCEEEEcCC
Confidence 9999999999999999999999999999999999999885 566678999999999999999999999999999999999
Q ss_pred ChhHHHHHHHhcCCCc
Q 017236 354 GKVIAGIVKRLDKSAE 369 (375)
Q Consensus 354 ~~~l~~~i~~~l~~~~ 369 (375)
+++|++++++++++..
T Consensus 869 g~vLt~lv~~il~~~~ 884 (2582)
T TIGR02813 869 KNILQKLVENTLKDKE 884 (2582)
T ss_pred cHHHHHHHHHHhhccC
Confidence 9999999999998753
No 8
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=100.00 E-value=1.4e-49 Score=387.44 Aligned_cols=275 Identities=18% Similarity=0.179 Sum_probs=230.2
Q ss_pred CCCcEEEEecCCCccccccchh-hhccHHHHHHHHHHhhhcCCChHHHhhcC-----CCCcccccccchhHHHH--HHHH
Q 017236 68 YKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNG-----PKEKLDSTIISQPAIYV--TSLA 139 (375)
Q Consensus 68 ~~~~~~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~lg~~l~~~~~~~-----~~~~~~~~~~~q~~i~~--~q~a 139 (375)
..++++|+|||||+||++||++ |..+|+|++.++++. ++.+.+..+ +.....+..+.|+++|+ ++++
T Consensus 179 ~~~~vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~~-----~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~~a 253 (538)
T TIGR02816 179 AKAGLAFVYPGVGTVYADMFNDFHQYFPALFAKLEREG-----DLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSSYL 253 (538)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhhCHHHHHHHHhcC-----CHHHHhccccccccchhhhhhhhhHhHHHHHHHHHHH
Confidence 3568999999999999999999 689999999999874 555555421 12224455688899995 5999
Q ss_pred HHHHH-HHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhh----------------hcCCC
Q 017236 140 AVELL-RARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAA----------------DAAKG 202 (375)
Q Consensus 140 l~~~l-~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~----------------~~~~g 202 (375)
++++| +++| + +|++++|||+|||+|++++|+|+++|++.++..|+++++... ....+
T Consensus 254 La~ll~~~~G-----I-~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~ 327 (538)
T TIGR02816 254 LTQLLCDEFA-----I-KPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQ 327 (538)
T ss_pred HHHHHHHhcC-----C-CCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhcccccccccc
Confidence 99999 5888 6 999999999999999999999999999999999888875421 01134
Q ss_pred eEEEEecCCHHHHHHHHHHhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCC-----CC
Q 017236 203 AMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGA-----FH 277 (375)
Q Consensus 203 ~m~av~~~~~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~-----fH 277 (375)
||.++++.+.++++++|.. .++++||++|+ .++||||++++++++.+.++..+ .++++|++.++ ||
T Consensus 328 ~~~avV~a~~~~V~~~L~~-------~~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~G-i~~r~L~a~HA~pam~~H 398 (538)
T TIGR02816 328 WNSFVVRCEAAPIEALLKD-------FPHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRG-IAANRVTAMHTQPALQEH 398 (538)
T ss_pred ccceeecCCHHHHHHHhcc-------CCCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCC-eeeeeccccccCcccccc
Confidence 5545558999999999864 34699999998 79999999999999999999744 45888999887 89
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCceEEEcC--CCCC-----CCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEE
Q 017236 278 TGFMEPAVSRLEAALAATQINTPRMPVISNV--DAQP-----HADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYE 350 (375)
Q Consensus 278 s~~m~~~~~~~~~~l~~~~~~~p~ipv~S~~--~g~~-----~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ie 350 (375)
+++|+++.++|...+ +|++|+||++ +|++ ..+++.+++||.+|+++||+|.++++++.++|+++|||
T Consensus 399 S~~me~~l~~f~~~l------~p~ip~iSnvt~tG~~~~~~~~~d~~~ia~yw~~ql~~PVrF~~~I~~L~~~Gv~~FVE 472 (538)
T TIGR02816 399 QNVMDFYLQPLCAEL------PMDIKFISAADLLAKNQNSEQAIDSQSIANSIADTFCQTLDFTALIHHAQEQGAKLFVE 472 (538)
T ss_pred cHHHHHHHHHHHhhc------ccCCeeeecccccCcccCCCcCCCHHHHHHHHHHcCCCccCHHHHHHHHHHCCCCEEEE
Confidence 999999999988765 5899999998 4553 23456678999999999999999999999999999999
Q ss_pred ECCChhHHHHHHHhcCCC
Q 017236 351 LGPGKVIAGIVKRLDKSA 368 (375)
Q Consensus 351 iGP~~~l~~~i~~~l~~~ 368 (375)
+||+++|++++++++++.
T Consensus 473 IGPg~vLs~lv~~~l~~~ 490 (538)
T TIGR02816 473 IGADRQNCTLIDKINKQD 490 (538)
T ss_pred eCCChHHHHHHHHHhhcc
Confidence 999999999999998653
No 9
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-50 Score=353.64 Aligned_cols=301 Identities=54% Similarity=0.827 Sum_probs=276.3
Q ss_pred CCCcEEEEecCCCccccccchhhhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHHHh
Q 017236 68 YKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRAR 147 (375)
Q Consensus 68 ~~~~~~fvF~GqG~q~~~m~~~l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~~~ 147 (375)
..+-.+++|||||.||.||++.+.++|..++.+++|.+++|+++++++.+++.+.++++...||+|++.++|..+.++..
T Consensus 60 ~~e~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl~YdLlki~~~gP~e~ldrT~~~QpAI~~~SlAa~E~l~~~ 139 (386)
T KOG2926|consen 60 PKETSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVLGYDLLKICVNGPKEKLDRTVIAQPAIDVSSLAALEQLRLL 139 (386)
T ss_pred cccceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHhhHHHHHHHhcCccchhhcccccccceecccHHHHHhcccc
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccC
Q 017236 148 DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD 227 (375)
Q Consensus 148 g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~ 227 (375)
+.+. +..-....|||+|||+|++++|+++++++++++..|+..|+..++-..++|..+.+.+..++.+.+...+....
T Consensus 140 ~p~~--ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~ 217 (386)
T KOG2926|consen 140 GPSI--IENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSA 217 (386)
T ss_pred Ccch--hheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhh
Confidence 6333 42356789999999999999999999999999999999999988888999999989998999998887764322
Q ss_pred --CCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCCCceEE
Q 017236 228 --EDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVI 305 (375)
Q Consensus 228 --~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p~ipv~ 305 (375)
+.+.++||+||+|+++||+|..+.|+-+.+..+.++.++.++|.|++||||++|+|+++.+.+.+..+.++.|.+|||
T Consensus 218 ~qe~~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaVsgAFHTr~MepAvepl~~Al~~vei~~p~~pVi 297 (386)
T KOG2926|consen 218 SQEYPVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAVSGAFHTRLMEPAVEPLTKALKAVEIKNPVIPVI 297 (386)
T ss_pred hccCCeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeeeccccchhhhhhhHHHHHHHHHHHHhcCCCccee
Confidence 357899999999999999999999999998888888888999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHC---CCCEEEEECCChhHHHHHHHhcCCCcc
Q 017236 306 SNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGK---GLKKSYELGPGKVIAGIVKRLDKSAEM 370 (375)
Q Consensus 306 S~~~g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~---g~~~~ieiGP~~~l~~~i~~~l~~~~~ 370 (375)
||++|+++.+...+..-+.+++.+||+|+.+++++.+. |...++|+|||.+|.+.+++.......
T Consensus 298 SNvdg~~~~~~~hi~~~l~kQ~~rPV~we~~~~ti~sk~~~g~~~sye~GPG~~l~~ilk~~~~~a~~ 365 (386)
T KOG2926|consen 298 SNVDGKPYRDPGHILKQLAKQIVRPVQWEQTLKTIYSKQGVGFPRSYEVGPGRVLVAILKRNNPQADF 365 (386)
T ss_pred ecCCCcccCChHHHHHHHHHHhcCchhHHHHHHHHHhcCCCCCCceEeeCCcHHHHHHHHHhCchhhh
Confidence 99999999999999999999999999999999999987 778899999999999999998765443
No 10
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-45 Score=385.29 Aligned_cols=349 Identities=28% Similarity=0.399 Sum_probs=298.3
Q ss_pred ccccccChHHHHHHHHhhhhhhccCcc--chhh----hhcccCCCCcceEEEeecccccccccCccc---------c--c
Q 017236 4 TTSLAFSSSSLHNRYHKRTTFFNGSAA--SFNR----IGVRRSLARSGVFMSVSVGKHTAVTVDDAL---------F--A 66 (375)
Q Consensus 4 ~~~~a~s~~~l~~~~~~~~~~l~~~~~--~~~~----~~~~r~~~~~r~~~~~~~~~~~~~~~~~~~---------~--~ 66 (375)
+.--|++++.|+.....+++|++.+.. ++.| +..+|.++++|..+++.+.++....+.... . .
T Consensus 442 l~lSAk~~~~L~~~a~~l~~~l~~~~~~~~l~dia~Tl~~gR~~~~~R~~~va~~~eel~~~L~~~~~~~~~~~~~~~~~ 521 (1061)
T COG3321 442 LVLSAKTAERLAATAPRLADRLELQGGLLSLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALSGVGAD 521 (1061)
T ss_pred eeeecCCHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHhhhhhccceeEEEeCCHHHHHHHHHHHhcCCCCccceeccc
Confidence 456799999999999999999997655 4555 778899999999999987665444332111 1 1
Q ss_pred CCCCcEEEEecCCCccccccchh-hhccHHHHHHHHHHhhhc----CCChHHHhhcCCCCcccccccchhHHHHHHHHHH
Q 017236 67 DYKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAV 141 (375)
Q Consensus 67 ~~~~~~~fvF~GqG~q~~~m~~~-l~~~p~~r~~~~~~~~~l----g~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~ 141 (375)
...++++|+|+|||+||.+|+++ +..+|+|+..++.|+..+ |+++.+.+..+....+......||.+|++|++++
T Consensus 522 ~~~~~~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~~ala 601 (1061)
T COG3321 522 DSGKKTVFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVSVALA 601 (1061)
T ss_pred CCCCceEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHcCCcccceecCCCCccccCcchhhhHHHHHHHHHH
Confidence 11126999999999999999999 689999999999998653 7787777765432225666789999999999999
Q ss_pred HHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCH-HHHHHHHH
Q 017236 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDS-DKVQQLCD 220 (375)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~-~~~~~~l~ 220 (375)
++|+++| + .|+.++|||+||++|++++|++|++|+++++..||++|+... ..|.|++| ..+. +.+.+++.
T Consensus 602 ~l~~s~g-----v-~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v~~Rg~lm~~~~--~~G~m~~v-~~~~~~~~~~~~~ 672 (1061)
T COG3321 602 ALWRSWG-----V-IPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLMQQLA--GEGAMLAV-ELSLLAEVQELLA 672 (1061)
T ss_pred HHHHhcC-----C-cCccccCcCHHHHHHHHHhccCChhhhhHhhhhcchhhccCC--CCcchhhh-hcCccchhhHHhh
Confidence 9999998 6 899999999999999999999999999999999999999853 34999999 5555 77777765
Q ss_pred HhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCCCCCCccchHHHHHHHHHHHhcCCCCCC
Q 017236 221 AANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTP 300 (375)
Q Consensus 221 ~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~m~~~~~~~~~~l~~~~~~~p 300 (375)
.. ..++.|+++|+|.++||+|+++.+.++...+...+. ..+++++.++|||+.|+++.+++.+.+.++..+.|
T Consensus 673 ~~------~~~v~ia~~n~P~~~vi~g~~~~i~~l~~~~~~~~~-~~~~~~v~~a~hs~~m~~~~~~~~~~la~i~~~~p 745 (1061)
T COG3321 673 LG------RPQVPLAAVNSPQQVVIAGDPEAIAALIARLQAQGV-RARRLAVSHAFHSPLMDPILDEFAAALADLAPRPP 745 (1061)
T ss_pred cc------ccceeEEEecCCceEEecCCHHHHHHHHHHHhccCc-ccceeeeeeccccHHHHHHHHHHHHHHhhcccCCC
Confidence 42 257999999999999999999999999999988444 57899999999999999999999999999999999
Q ss_pred CceEEEcCCCCCCCChHHHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCC
Q 017236 301 RMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSA 368 (375)
Q Consensus 301 ~ipv~S~~~g~~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~~~ 368 (375)
.+|++|++++.+....-...+||.+++++||+|..+++.+.+.+.++|+|+|||+.|+.++++++.+.
T Consensus 746 ~~p~~S~~~~~~~~~~~~d~~yw~~~~r~~v~f~~~i~~~~~~~~~~f~E~~p~p~l~~~~~~~~~~~ 813 (1061)
T COG3321 746 QIPLISNVTGDLAGEPGGDAQYWVQHLRQPVRFADAIAAALADGARTFIEVGPGPVLTESIKQTLRDA 813 (1061)
T ss_pred CcceeeeeeccccCCcccCHHHHHHHHHhhccHHHHHHHHHhcccceEEEecCCHhHHHHHHHHhhhh
Confidence 99999999999844333448999999999999999999999999999999999999999999998764
No 11
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=320.49 Aligned_cols=332 Identities=19% Similarity=0.255 Sum_probs=273.7
Q ss_pred ccChHHHHHHHHhhhhhhccCccchh------h-hhcccCCCCcceEEEeecccccccccCcccccCCCCcEEEEecCCC
Q 017236 8 AFSSSSLHNRYHKRTTFFNGSAASFN------R-IGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQG 80 (375)
Q Consensus 8 a~s~~~l~~~~~~~~~~l~~~~~~~~------~-~~~~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~fvF~GqG 80 (375)
++|+++..+.++.... +..++. + ...-...+|+|.+.+....+..... ...+....++.|+++|.|
T Consensus 437 gRT~eAVeqll~~~~~----n~~D~~~l~llndi~s~p~~~~pFRGY~vl~~e~~~~ev---~~~~~~eRPiwfiysGMG 509 (2376)
T KOG1202|consen 437 GRTPEAVEQLLEQALR----NSDDLELLSLLNDIASVPAPLHPFRGYAVLGGERGGPEV---QQVPAGERPIWFIYSGMG 509 (2376)
T ss_pred CCCHHHHHHHHHHHhc----ccchHHHHHHHHHHhcCCccCCcccceEEeccccCCcce---eecCCCCcceEEEEeCCc
Confidence 4677777666655442 222222 2 2344677999988887665322211 122233467999999999
Q ss_pred ccccccchhhhccHHHHHHHHHHhhhc---CCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHHHhcCCCCcccCc
Q 017236 81 AQAVGMGKEAQSVPAAAELYKKANDIL---GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSV 157 (375)
Q Consensus 81 ~q~~~m~~~l~~~p~~r~~~~~~~~~l---g~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~~~g~~~~~i~~p 157 (375)
+||++|+++|..-+.||+.+.+|++.+ |.++.+++.+.+++.+++..++...|.++|+||.++|...| + +|
T Consensus 510 sQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitAiQiaLtDlLs~lg-----i-~P 583 (2376)
T KOG1202|consen 510 SQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITAIQIALTDLLSCLG-----I-RP 583 (2376)
T ss_pred chhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C-CC
Confidence 999999999988999999999999987 89999999988888888888999999999999999999998 7 99
Q ss_pred cEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHHHHHHHHHhccccCCCCceEEEee
Q 017236 158 DVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANY 237 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~v~Ia~~ 237 (375)
|.++|||.||+.++|+-|+++.|+.+..+|+||+.+-.+ .-.+|.|+|| |++.|++.+-+ ++.++-+|.
T Consensus 584 DGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~-~l~kGaMAAV-GLsWEq~~~~~---------P~~~~paCH 652 (2376)
T KOG1202|consen 584 DGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDT-HLPKGAMAAV-GLSWEQCKSRC---------PPDVVPACH 652 (2376)
T ss_pred CcccccccchhcccccccccCHHHHHHHHHHcCceeccc-cCCCcchhhh-cCCHHHHhccC---------CCccccccc
Confidence 999999999999999999999999999999999988776 5689999999 99999988755 788999999
Q ss_pred eCCCcEEEEcCcchHHHHHHHHHhccCcceEEcc-CCCCCCccchHHHHHHHHHHHhcC--CCCCCCceEEEcCCCC--C
Q 017236 238 LCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLA-VAGAFHTGFMEPAVSRLEAALAAT--QINTPRMPVISNVDAQ--P 312 (375)
Q Consensus 238 Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~-v~~~fHs~~m~~~~~~~~~~l~~~--~~~~p~ipv~S~~~g~--~ 312 (375)
||.++|+||||++.+.+++++|++.+. +.+.+. ..+|||||+|+.+.+++++.++++ +.++....++|+.--+ |
T Consensus 653 Ns~D~~TiSGp~a~v~~~v~qL~~~gv-Fak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i~epK~rsarWlSTSipEa~W 731 (2376)
T KOG1202|consen 653 NSKDNVTISGPQASVFAFVEQLRAEGV-FAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVIPEPKPRSARWLSTSIPEAQW 731 (2376)
T ss_pred CCCCceEecCChHHHHHHHHHhhhcCe-eeeEecCCCccccCHHHHhhChHHHHHHHHhcCCCCCcccchhhccCChhhh
Confidence 999999999999999999999999655 466666 458999999999999999999876 3445567899987643 3
Q ss_pred CCChH--HHHHHHHHHhcCcccHHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcC
Q 017236 313 HADPE--VIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDK 366 (375)
Q Consensus 313 ~~~~~--~~~~~~~~~l~~pV~f~~av~~l~~~g~~~~ieiGP~~~l~~~i~~~l~ 366 (375)
-.+-. ..++|...|+.+||.|.++++.+-++ .+.|||.||..+...+++.|+
T Consensus 732 ~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP~n--Av~vEiAPH~LlqAiLkRsL~ 785 (2376)
T KOG1202|consen 732 HSSLARTSSAEYHVNNLVSPVLFHEALQHVPEN--AVVVEIAPHGLLQAILKRSLK 785 (2376)
T ss_pred cChhhhhcchhhhhhccccHHHHHHHHHhCccc--ceEEEecchHHHHHHHHhhcC
Confidence 22222 23799999999999999999987654 379999999999999998875
No 12
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=90.92 E-value=0.86 Score=38.52 Aligned_cols=48 Identities=25% Similarity=0.371 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHH
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (375)
-.+.+++..+.|.+.| + .++.+.|-|.|-+.|+..+.-.+.++..++.
T Consensus 9 rG~~~~Gvl~aL~e~g-----i-~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~ 56 (172)
T cd07198 9 LGIYHVGVAKALRERG-----P-LIDIIAGTSAGAIVAALLASGRDLEEALLLL 56 (172)
T ss_pred HHHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 3467889999999988 6 7999999999999999999999988877765
No 13
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=87.67 E-value=1.7 Score=36.67 Aligned_cols=48 Identities=21% Similarity=0.323 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
.+.+++..+.|.+.| + .++.++|-|.|.+.|+..+...+.++..+...
T Consensus 12 G~~~~Gvl~~L~~~~-----~-~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~ 59 (175)
T cd07205 12 GLAHIGVLKALEEAG-----I-PIDIVSGTSAGAIVGALYAAGYSPEEIEERAK 59 (175)
T ss_pred HHHHHHHHHHHHHcC-----C-CeeEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 346788888888887 5 79999999999999999988888888776654
No 14
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=87.12 E-value=1.9 Score=37.00 Aligned_cols=48 Identities=25% Similarity=0.245 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
.+.+++..+.|.+.| + .|+.++|-|.|-+.|+..+...+.++..++..
T Consensus 11 G~~~~Gvl~~L~e~~-----~-~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~ 58 (194)
T cd07207 11 GIAYIGALKALEEAG-----I-LKKRVAGTSAGAITAALLALGYSAADIKDILK 58 (194)
T ss_pred HHHHHHHHHHHHHcC-----C-CcceEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 356678888888887 5 78999999999999988887788877666554
No 15
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=86.13 E-value=2.5 Score=37.41 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
.+.+++..+.|.+.| + +|+.+.|-|.|-+.|+..+...+.++..+...
T Consensus 12 G~~~~GvL~aL~e~g-----i-~~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~ 59 (221)
T cd07210 12 FYAHLGFLAALLEMG-----L-EPSAISGTSAGALVGGLFASGISPDEMAELLL 59 (221)
T ss_pred HHHHHHHHHHHHHcC-----C-CceEEEEeCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 467888889999887 5 79999999999999999988888888766543
No 16
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=85.74 E-value=2.1 Score=37.66 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCC
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 178 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls 178 (375)
.+.|++..+.|.+.| + .++.+.|-|.|-+.|+..+...+
T Consensus 10 G~~~~Gvl~aL~e~g-----~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 10 GAYQAGVLKALAEAG-----I-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCc
Confidence 467889999999988 5 79999999999999998888777
No 17
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=84.96 E-value=15 Score=35.31 Aligned_cols=57 Identities=16% Similarity=0.071 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHH
Q 017236 131 PAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 189 (375)
Q Consensus 131 ~~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r 189 (375)
-.+....++.++.|.+.+.. ++..++.+.|-|.|.++|++.+...+++++...++.-
T Consensus 18 GflG~yHvGV~~~L~e~~p~--ll~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~i 74 (405)
T cd07223 18 GYLGLYHVGVTECLRQRAPR--LLQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLGM 74 (405)
T ss_pred HHHHHHHHHHHHHHHHhCch--hhccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 34667789999999888622 2335678999999999999999999999766665543
No 18
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=84.93 E-value=2.6 Score=39.35 Aligned_cols=47 Identities=19% Similarity=0.250 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (375)
-+.+++..+.|.+.| + .|+++.|-|+|.+.|+..|..++.++.-..+
T Consensus 23 G~~hiGVl~aL~e~g-----i-~~~~iaGtS~GAiva~l~A~g~~~~~~~~~~ 69 (306)
T COG1752 23 GAAHIGVLKALEEAG-----I-PIDVIAGTSAGAIVAALYAAGMDEDELELAA 69 (306)
T ss_pred HHHHHHHHHHHHHcC-----C-CccEEEecCHHHHHHHHHHcCCChhHHHHHH
Confidence 356788889999988 6 8999999999999999888887776644433
No 19
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=83.69 E-value=3.3 Score=37.82 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLK 184 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~ 184 (375)
.+.+++..+.|.+.| + .+|++.|-|+|.+.++..+.-.+..+...
T Consensus 22 G~ahiGVL~aLeE~g-----i-~~d~v~GtSaGAiiga~ya~g~~~~~~~~ 66 (269)
T cd07227 22 GISHIGILQALEEAG-----I-PIDAIGGTSIGSFVGGLYAREADLVPIFG 66 (269)
T ss_pred HHHHHHHHHHHHHcC-----C-CccEEEEECHHHHHHHHHHcCCchHHHHH
Confidence 356788889999988 6 79999999999988877776667766543
No 20
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=83.19 E-value=3.6 Score=38.40 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
.+.+++..+.|.+.| + .||.++|-|+|-+.++..+.-.+.++..+...
T Consensus 27 G~ahiGvL~aLee~g-----i-~~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~~ 74 (306)
T cd07225 27 GCAHIGVIKALEEAG-----I-PVDMVGGTSIGAFIGALYAEERNISRMKQRAR 74 (306)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 456788889999998 6 79999999999887777766677666555443
No 21
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=83.10 E-value=3.5 Score=34.89 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGL 183 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal 183 (375)
.+.+++..+.|.+.| + .|+.+.|-|.|-+.|+..+...+.++..
T Consensus 12 G~~~~Gvl~~L~e~g-----~-~~d~i~GtSaGAi~aa~~a~g~~~~~~~ 55 (175)
T cd07228 12 GWAHIGVLRALEEEG-----I-EIDIIAGSSIGALVGALYAAGHLDALEE 55 (175)
T ss_pred HHHHHHHHHHHHHCC-----C-CeeEEEEeCHHHHHHHHHHcCCCHHHHH
Confidence 456788888898887 5 7999999999999888887777666543
No 22
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=83.00 E-value=3.5 Score=39.69 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 132 ~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
+..+..++..+.|.+.| + .|+.+.|-|.|.+.|+.++. .+.+|..++..
T Consensus 93 ~~G~~h~Gv~kaL~e~g-----l-~p~~i~GtS~Gaivaa~~a~-~~~~e~~~~l~ 141 (391)
T cd07229 93 IFGLCHLGVVKALWLRG-----L-LPRIITGTATGALIAALVGV-HTDEELLRFLD 141 (391)
T ss_pred HHHHHHHHHHHHHHHcC-----C-CCceEEEecHHHHHHHHHHc-CCHHHHHHHHh
Confidence 34567888999999998 6 79999999999999999998 57788777765
No 23
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=81.32 E-value=8.7 Score=34.25 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc-cCccEEeecCHHHHHHHHHhccCChHHHHHHHHHH
Q 017236 132 AIYVTSLAAVELLRARDGGQQII-DSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 189 (375)
Q Consensus 132 ~i~~~q~al~~~l~~~g~~~~~i-~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r 189 (375)
.+++..++..+.|.+.| + +..+.++|-|.|.+.|+..+...+.++..++...-
T Consensus 9 ~lg~yh~GVl~~L~e~g-----i~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~~ 62 (233)
T cd07224 9 LLFPYHLGVLSLLIEAG-----VINETTPLAGASAGSLAAACSASGLSPEEALEATEEL 62 (233)
T ss_pred HHHHHHHHHHHHHHHcC-----CCCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 35677888999999987 4 23568999999999999888888888777765543
No 24
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=79.22 E-value=47 Score=29.75 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
..+.+++..+.|.+.|.. +++.++.++|-|.|.+.|+..+...+.++..+...
T Consensus 10 ~G~yh~GVl~~L~e~g~~--l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 62 (243)
T cd07204 10 LGIYHVGVASALREHAPR--LLQNARRIAGASAGAIVAAVVLCGVSMEEACSFIL 62 (243)
T ss_pred HHHHHHHHHHHHHHcCcc--cccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 345688889999988711 01113599999999999999888888888665544
No 25
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=78.97 E-value=9.8 Score=36.43 Aligned_cols=55 Identities=16% Similarity=0.238 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 131 PAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 131 ~~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
-...+.+++.++.|.+.+.. ++...+.++|-|.|-++|+..+...+.++..++..
T Consensus 21 GfrGiYHvGVl~aL~E~gp~--ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~ 75 (382)
T cd07219 21 GFLSFYQAGVVDALRDLAPR--MLETAHRVAGTSAGSVIAALVVCGISMDEYLRVLN 75 (382)
T ss_pred HHHHHHHHHHHHHHHhcCCc--ccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34567799999999987622 13247899999999999998888888988877765
No 26
>PRK10279 hypothetical protein; Provisional
Probab=77.73 E-value=3.6 Score=38.21 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHH-Hhcc
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALA-FAGA 176 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~-~aG~ 176 (375)
.+.+++..+.|.+.| + +|++++|-|+|.+.++. ++|.
T Consensus 17 G~ahiGVL~aL~E~g-----i-~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 17 GWSHIGVINALKKVG-----I-EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHHHHcC-----C-CcCEEEEEcHHHHHHHHHHcCC
Confidence 456888999999998 6 79999999999877654 5554
No 27
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=76.83 E-value=9.1 Score=34.45 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
..+.+++..+.|.+.|.. + .++.+.|-|.|.++|++.+...+.++..+...
T Consensus 11 rG~yh~GVl~aL~e~g~~---~-~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 61 (245)
T cd07218 11 LGIYHVGVAVCLKKYAPH---L-LLNKISGASAGALAACCLLCDLPLGEMTSDFL 61 (245)
T ss_pred HHHHHHHHHHHHHHhCcc---c-CCCeEEEEcHHHHHHHHHHhCCcHHHHHHHHH
Confidence 456788889999998711 1 46889999999999999988888877665443
No 28
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=76.01 E-value=9.2 Score=35.71 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHH
Q 017236 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (375)
Q Consensus 132 ~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (375)
...+..++..+.|.+.| + .|+.+.|-|.|.+.|+..+. .+.+|..++.
T Consensus 78 ~~g~~h~GVlkaL~e~g-----l-~p~~i~GsSaGAivaa~~~~-~t~~El~~~~ 125 (323)
T cd07231 78 ALGTFHVGVVRTLVEHQ-----L-LPRVIAGSSVGSIVCAIIAT-RTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 34567888999999988 6 79999999999999988876 5777766665
No 29
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=75.14 E-value=16 Score=33.02 Aligned_cols=55 Identities=16% Similarity=0.079 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHH
Q 017236 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (375)
Q Consensus 132 ~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (375)
...+..++..+.|.+.|.. ++..++.+.|-|.|.++|++.+...+.++..+....
T Consensus 14 ~rG~yh~GVl~~L~e~g~~--l~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~~ 68 (249)
T cd07220 14 FLGVYHVGVASCLLEHAPF--LVANARKIYGASAGALTATALVTGVCLGECGASVIR 68 (249)
T ss_pred HHHHHHHHHHHHHHhcCCc--ccccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3456688888999988611 122378999999999999988877788765554443
No 30
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=74.52 E-value=12 Score=33.87 Aligned_cols=54 Identities=13% Similarity=0.236 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHH
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKL 188 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~ 188 (375)
..+.+++..+.|.+.+.. ++..++.++|-|.|.++|+..+...+.++..+....
T Consensus 11 rG~yh~GVl~aL~e~~~~--l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~ 64 (252)
T cd07221 11 LGFYHVGVTRCLSERAPH--LLRDARMFFGASAGALHCVTFLSGLPLDQILQILMD 64 (252)
T ss_pred HHHHHHHHHHHHHHhCcc--hhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 345688888999888611 122378999999999999988888888777776553
No 31
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=71.39 E-value=10 Score=37.08 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHH
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (375)
..+..++..+.|.+.| + .|+.+.|-|.|.+.|+..+. .+.++..++.
T Consensus 84 rG~~hiGVLkaL~E~g-----l-~p~vIsGTSaGAivAal~as-~~~eel~~~l 130 (421)
T cd07230 84 FGMFHIGVLKALFEAN-----L-LPRIISGSSAGSIVAAILCT-HTDEEIPELL 130 (421)
T ss_pred HHHHHHHHHHHHHHcC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 3456788888888887 6 79999999999998887776 5666655443
No 32
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=69.28 E-value=14 Score=35.90 Aligned_cols=47 Identities=21% Similarity=0.149 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHH
Q 017236 134 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVK 187 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~ 187 (375)
.+..++..+.|.+.| + .|+.++|-|.|.+.|+..+. -+.++..++..
T Consensus 79 G~~h~GVlkaL~e~g-----l-lp~iI~GtSAGAivaalla~-~t~~el~~~~~ 125 (407)
T cd07232 79 AYYHFGVVKALLDAD-----L-LPNVISGTSGGSLVAALLCT-RTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHHHHHhCC-----C-CCCEEEEECHHHHHHHHHHc-CCHHHHHHHHh
Confidence 345778888888887 5 79999999999999888886 56666655543
No 33
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.36 E-value=11 Score=34.27 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhcCCCCcccC-ccEEeecCHHHHHHHHHhccCC
Q 017236 134 YVTSLAAVELLRARDGGQQIIDS-VDVTCGLSLGEYTALAFAGAFS 178 (375)
Q Consensus 134 ~~~q~al~~~l~~~g~~~~~i~~-p~~v~GhS~GE~aAa~~aG~ls 178 (375)
.+.+++..+.|.+.| + . ++.++|-|.|-+.|+..+.-.+
T Consensus 10 G~~~~Gvl~al~e~~-----~-~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 10 GAYTAGVLDAFLEAG-----I-RPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHHHHHcC-----C-CCCCEEEEECHHHHhHHHHHhCCc
Confidence 356788889999887 5 5 9999999999988776544333
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=66.18 E-value=7 Score=34.33 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=24.3
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccC
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAF 177 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~l 177 (375)
+.+++...+ + ++-.++|||+|-..|..++...
T Consensus 56 l~~~l~~~~-----~-~~~~lvG~S~Gg~va~~~a~~~ 87 (242)
T PRK11126 56 LSQTLQSYN-----I-LPYWLVGYSLGGRIAMYYACQG 87 (242)
T ss_pred HHHHHHHcC-----C-CCeEEEEECHHHHHHHHHHHhC
Confidence 345566665 4 6788999999999999888654
No 35
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=62.87 E-value=28 Score=32.58 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHh-cCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCHHH
Q 017236 136 TSLAAVELLRAR-DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDK 214 (375)
Q Consensus 136 ~q~al~~~l~~~-g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~~~~~~~~~g~m~av~~~~~~~ 214 (375)
+.+.+.+.+++. | .++...+|.+.|-|.|-+.|+..+..++.+|..++....+..+= .+. ...+.+.
T Consensus 13 ~~i~vL~~le~~~g--~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~~~iF------~~~----~~y~~~~ 80 (312)
T cd07212 13 VLIQMLIAIEKALG--RPIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMKDRVF------DGS----RPYNSEP 80 (312)
T ss_pred HHHHHHHHHHHHhC--CCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhhhhhC------CCC----CCCCChH
Confidence 444555566664 4 11112379999999999988888888999998887554332111 000 1245666
Q ss_pred HHHHHHHh
Q 017236 215 VQQLCDAA 222 (375)
Q Consensus 215 ~~~~l~~~ 222 (375)
+++++++.
T Consensus 81 le~~L~~~ 88 (312)
T cd07212 81 LEEFLKRE 88 (312)
T ss_pred HHHHHHHH
Confidence 77777654
No 36
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=60.97 E-value=21 Score=33.13 Aligned_cols=39 Identities=23% Similarity=0.253 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhcc
Q 017236 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 132 ~i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ 176 (375)
...+.+++..+.|.+.| + .|+.+.|-|.|.+.|+..+..
T Consensus 79 ~~g~~h~Gvl~aL~e~~-----l-~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 79 SLGLFHLGVVKALWEQD-----L-LPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHHHHHHHHHHHcC-----C-CCCEEEEEcHHHHHHHHHHcC
Confidence 34567888889888887 5 799999999999888877654
No 37
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=60.07 E-value=43 Score=30.08 Aligned_cols=42 Identities=21% Similarity=0.254 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhcc
Q 017236 133 IYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 133 i~~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ 176 (375)
..+.+++..+.|.+.|. .++..++.+.|-|.|-+.|+..+..
T Consensus 10 rG~yhiGVl~~L~e~g~--~l~~~~~~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 10 LGIYHLGAAKALLRHGK--KLLKRVKRFAGASAGSLVAAVLLTA 51 (246)
T ss_pred HHHHHHHHHHHHHHcCc--hhhccCCEEEEECHHHHHHHHHhcC
Confidence 34568888999999871 1122478999999999999988843
No 38
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=59.48 E-value=26 Score=32.22 Aligned_cols=54 Identities=28% Similarity=0.348 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCChHHHHHHHHHHH
Q 017236 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG 190 (375)
Q Consensus 135 ~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~ 190 (375)
++++.+.+.+.+.+.. +...+|.++|-|.|-+.|+..+...+.++.+++....+
T Consensus 15 i~~~~vL~~Le~~~~~--~~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~~ 68 (288)
T cd07213 15 IVQLVLLKRLAEEFPS--FLDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEVG 68 (288)
T ss_pred HHHHHHHHHHHHhCcc--cccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHhC
Confidence 4556666667766521 12257999999999999998888789898887776543
No 39
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=58.40 E-value=38 Score=31.45 Aligned_cols=56 Identities=23% Similarity=0.397 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh-ccCChHHHHHHHHHHHH
Q 017236 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA-GAFSFEDGLKLVKLRGA 191 (375)
Q Consensus 135 ~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a-G~ls~~dal~l~~~r~~ 191 (375)
++++.+.+.+.+.. +..+....|.+.|-|.|-+.|+..+ +.++.+|..++....+.
T Consensus 21 ~~~~~vL~~Le~~~-~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~~ 77 (308)
T cd07211 21 VVALEILRKIEKLT-GKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLGK 77 (308)
T ss_pred HHHHHHHHHHHHHh-CCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 44566666666553 1111123689999999999888886 46899998887765543
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=56.71 E-value=60 Score=27.68 Aligned_cols=21 Identities=29% Similarity=0.237 Sum_probs=16.6
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
.+-.++|||+|-..|+.++..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHh
Confidence 566789999998888777654
No 41
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=55.11 E-value=15 Score=33.57 Aligned_cols=30 Identities=13% Similarity=-0.085 Sum_probs=22.0
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
+..++.+.+ + .+..++|||+|-..|+..+.
T Consensus 92 l~~~l~~l~-----~-~~~~lvGhS~Gg~va~~~a~ 121 (294)
T PLN02824 92 LNDFCSDVV-----G-DPAFVICNSVGGVVGLQAAV 121 (294)
T ss_pred HHHHHHHhc-----C-CCeEEEEeCHHHHHHHHHHH
Confidence 444555655 4 67789999999988887763
No 42
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=55.10 E-value=65 Score=28.38 Aligned_cols=21 Identities=24% Similarity=0.072 Sum_probs=17.1
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
++-.++|||+|-+.|..++..
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHh
Confidence 456899999999988887743
No 43
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=54.70 E-value=13 Score=33.28 Aligned_cols=28 Identities=36% Similarity=0.283 Sum_probs=20.4
Q ss_pred HHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
+++...+ + ++..++|||+|-..|+.++.
T Consensus 87 ~~i~~~~-----~-~~~~lvG~S~Gg~~a~~~a~ 114 (278)
T TIGR03056 87 ALCAAEG-----L-SPDGVIGHSAGAAIALRLAL 114 (278)
T ss_pred HHHHHcC-----C-CCceEEEECccHHHHHHHHH
Confidence 3455554 4 67789999999888887753
No 44
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=54.58 E-value=15 Score=33.13 Aligned_cols=20 Identities=30% Similarity=0.237 Sum_probs=17.1
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
++-.++|||+|-+.|+.++.
T Consensus 91 ~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred CceEEEEECHHHHHHHHHHH
Confidence 57789999999998888774
No 45
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=53.88 E-value=34 Score=32.35 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=25.1
Q ss_pred HHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhccCC
Q 017236 138 LAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFS 178 (375)
Q Consensus 138 ~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls 178 (375)
.+|...+++.| + .|-.+.|.|+|-.-|+.++..+.
T Consensus 163 ~~Ll~Wl~~~G-----~-~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 163 RALLHWLEREG-----Y-GPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred HHHHHHHHhcC-----C-CceEEEEechhHhhHHhhhhcCC
Confidence 34556667776 4 57899999999887776665544
No 46
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=50.82 E-value=51 Score=31.33 Aligned_cols=84 Identities=20% Similarity=0.171 Sum_probs=50.4
Q ss_pred CccEEeecCHHHHHHHHHhccCChHHHHHHHHHHHHHH-HHhhhcCCCeEEE--EecCCHHHHHHHHHHhccc--cC---
Q 017236 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAM-QEAADAAKGAMVS--IIGLDSDKVQQLCDAANQE--VD--- 227 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~r~~~~-~~~~~~~~g~m~a--v~~~~~~~~~~~l~~~~~~--~~--- 227 (375)
..|.+.|-|.|-+.|+..+.-++.+|.+++....+..+ ..... ..+.... ....+.+.++++++++-.. +.
T Consensus 41 ~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~~iF~~~~~-~~~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~ 119 (344)
T cd07217 41 YFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGVNMFDKAWL-AQRLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDT 119 (344)
T ss_pred cccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhhhhcCchhh-hhhccccccccccCcHHHHHHHHHHcCceeecccc
Confidence 36899999999999999988899999998887665432 11100 0000000 0015667788887765322 21
Q ss_pred CCCceEEEeeeCC
Q 017236 228 EDNKVQIANYLCP 240 (375)
Q Consensus 228 ~~~~v~Ia~~Nsp 240 (375)
....+.|.++|-.
T Consensus 120 ~~~~l~i~a~dl~ 132 (344)
T cd07217 120 LRTLLMIVTRNAT 132 (344)
T ss_pred cCceEEEEEEecC
Confidence 1234667776633
No 47
>PRK03592 haloalkane dehalogenase; Provisional
Probab=49.82 E-value=20 Score=32.68 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=22.2
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
+..++...+ + ++..++|||+|-+.|+..+.
T Consensus 83 l~~ll~~l~-----~-~~~~lvGhS~Gg~ia~~~a~ 112 (295)
T PRK03592 83 LDAWFDALG-----L-DDVVLVGHDWGSALGFDWAA 112 (295)
T ss_pred HHHHHHHhC-----C-CCeEEEEECHHHHHHHHHHH
Confidence 344566665 4 67889999999988877664
No 48
>PRK00870 haloalkane dehalogenase; Provisional
Probab=49.69 E-value=20 Score=32.94 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=20.8
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
+.+++.+.+ + ++-.++|||+|-+.|...+
T Consensus 105 l~~~l~~l~-----~-~~v~lvGhS~Gg~ia~~~a 133 (302)
T PRK00870 105 MRSWFEQLD-----L-TDVTLVCQDWGGLIGLRLA 133 (302)
T ss_pred HHHHHHHcC-----C-CCEEEEEEChHHHHHHHHH
Confidence 334566665 4 5668999999988887665
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=49.53 E-value=20 Score=33.76 Aligned_cols=30 Identities=33% Similarity=0.428 Sum_probs=20.9
Q ss_pred HHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
..++.+.+ +.++..++|||+|-+.|...+.
T Consensus 128 ~~ll~~l~-----l~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 128 ALLLDALG-----IARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred HHHHHHcC-----CCcceEEEEECHHHHHHHHHHH
Confidence 35566665 4223469999999988887764
No 50
>PRK13604 luxD acyl transferase; Provisional
Probab=49.27 E-value=22 Score=33.16 Aligned_cols=20 Identities=15% Similarity=-0.087 Sum_probs=16.0
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-.++|||+|-.+|..++.
T Consensus 108 ~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred CceEEEEECHHHHHHHHHhc
Confidence 45689999999999876654
No 51
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=49.21 E-value=25 Score=29.56 Aligned_cols=29 Identities=38% Similarity=0.423 Sum_probs=21.3
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
+.++++..+ . ++-.++|||+|-..++.++
T Consensus 56 l~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a 84 (228)
T PF12697_consen 56 LAELLDALG-----I-KKVILVGHSMGGMIALRLA 84 (228)
T ss_dssp HHHHHHHTT-----T-SSEEEEEETHHHHHHHHHH
T ss_pred hhhcccccc-----c-ccccccccccccccccccc
Confidence 334566665 3 5678999999988888766
No 52
>PRK11071 esterase YqiA; Provisional
Probab=49.08 E-value=23 Score=30.33 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.5
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
++-.++|||+|-+.|+..+..
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHH
Confidence 567899999999999887743
No 53
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=47.25 E-value=73 Score=28.63 Aligned_cols=35 Identities=31% Similarity=0.364 Sum_probs=28.1
Q ss_pred CccEEeecCHHHHHHHHHhcc-CChHHHHHHHHHHH
Q 017236 156 SVDVTCGLSLGEYTALAFAGA-FSFEDGLKLVKLRG 190 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~-ls~~dal~l~~~r~ 190 (375)
..|.++|-|.|-+.|+..+.. ++.++..++....+
T Consensus 34 ~fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~ 69 (258)
T cd07199 34 LFDLIAGTSTGGIIALGLALGRYSAEELVELYEELG 69 (258)
T ss_pred ccceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 468999999999888887766 89999888765543
No 54
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=47.03 E-value=47 Score=30.64 Aligned_cols=62 Identities=19% Similarity=0.172 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhccCcceEEccCC
Q 017236 210 LDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVA 273 (375)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~ 273 (375)
.+++++++.+.++...+...+++.||.. --+-+|||+.+.++++.+.+.+........++.+
T Consensus 17 ~dp~~~~~~l~~~~~~~~vkGrillA~E--GINgtvsG~~e~~~~~~~~l~a~~~f~~l~~K~s 78 (308)
T COG1054 17 EDPEALRDPLLALCKALGVKGRILLAHE--GINGTVSGSAEAIEAYMAWLRADPGFADLRFKIS 78 (308)
T ss_pred CCHHHHHHHHHHHHHHcCceeEEEEccC--CcceeEecCHHHHHHHHHHHHhCcccccceeeec
Confidence 3456666655555555555788999862 1234799999999999999987654333334443
No 55
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=46.09 E-value=18 Score=30.45 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=15.9
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
.+.+++|||+|-++++...
T Consensus 55 ~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp TTEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHH
Confidence 5679999999988887655
No 56
>PF03958 Secretin_N: Bacterial type II/III secretion system short domain; InterPro: IPR005644 This is a group of NolW-like proteins, which are closely related to bacterial type II and III secretion system protein (IPR004846 from INTERPRO).; PDB: 3EZJ_C 2Y3M_A 3OSS_D.
Probab=45.85 E-value=69 Score=22.79 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=27.3
Q ss_pred CceEEEeeeCCCcEEEEcCcchHHHHHHHHHh
Q 017236 230 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKS 261 (375)
Q Consensus 230 ~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~ 261 (375)
..+.|......++++|.|+++.++.+.+.++.
T Consensus 44 ~~~~i~~d~~tNsliv~g~~~~~~~i~~li~~ 75 (82)
T PF03958_consen 44 SSGRIVADERTNSLIVRGTPEDLEQIRELIKQ 75 (82)
T ss_dssp TTTEEEEECTTTEEEEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCEEEEEeCHHHHHHHHHHHHH
Confidence 56788998889999999999999888777665
No 57
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=45.28 E-value=30 Score=31.51 Aligned_cols=29 Identities=28% Similarity=0.224 Sum_probs=21.2
Q ss_pred HHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
.+.+++.+ . .|-.++|||+|-..|+.++.
T Consensus 90 i~~L~~~~-----~-~~v~LvG~SmGG~vAl~~A~ 118 (266)
T TIGR03101 90 YRWLIEQG-----H-PPVTLWGLRLGALLALDAAN 118 (266)
T ss_pred HHHHHhcC-----C-CCEEEEEECHHHHHHHHHHH
Confidence 44566655 3 57789999999988886653
No 58
>PLN02965 Probable pheophorbidase
Probab=44.86 E-value=23 Score=31.57 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=15.6
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
++-.++|||+|-..|..++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred CCEEEEecCcchHHHHHHH
Confidence 3778999999988777666
No 59
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=44.79 E-value=28 Score=33.65 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
+.+++.+.| +.+..+++|||+|-..|...+
T Consensus 150 ~~~ll~~lg-----i~~~~~vvG~SmGG~ial~~a 179 (389)
T PRK06765 150 QKELIKSLG-----IARLHAVMGPSMGGMQAQEWA 179 (389)
T ss_pred HHHHHHHcC-----CCCceEEEEECHHHHHHHHHH
Confidence 345566676 534557999999988776654
No 60
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=43.71 E-value=19 Score=28.60 Aligned_cols=16 Identities=44% Similarity=0.308 Sum_probs=12.3
Q ss_pred EEeecCHHHHHHHHHh
Q 017236 159 VTCGLSLGEYTALAFA 174 (375)
Q Consensus 159 ~v~GhS~GE~aAa~~a 174 (375)
.+.|||+|--.|..++
T Consensus 67 ~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 67 VITGHSLGGALASLAA 82 (140)
T ss_dssp EEEEETHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHH
Confidence 6899999976666554
No 61
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.10 E-value=45 Score=29.87 Aligned_cols=15 Identities=27% Similarity=0.224 Sum_probs=12.1
Q ss_pred CccEEeecCHHHHHH
Q 017236 156 SVDVTCGLSLGEYTA 170 (375)
Q Consensus 156 ~p~~v~GhS~GE~aA 170 (375)
+|-++.|||+|-+-|
T Consensus 74 ~P~alfGHSmGa~lA 88 (244)
T COG3208 74 APFALFGHSMGAMLA 88 (244)
T ss_pred CCeeecccchhHHHH
Confidence 688999999996544
No 62
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=41.88 E-value=31 Score=32.83 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=19.3
Q ss_pred HHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 141 VELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 141 ~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
.+++...+ + ++-.++|||+|-+.|..++
T Consensus 146 ~~~l~~l~-----~-~~~~lvGhS~Gg~ia~~~a 173 (360)
T PLN02679 146 LDFLEEVV-----Q-KPTVLIGNSVGSLACVIAA 173 (360)
T ss_pred HHHHHHhc-----C-CCeEEEEECHHHHHHHHHH
Confidence 34555555 3 5778999999988765443
No 63
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=41.06 E-value=27 Score=31.31 Aligned_cols=28 Identities=43% Similarity=0.421 Sum_probs=20.6
Q ss_pred HHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 142 ELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
+++...+ + ++-.++|||+|-+.|...+.
T Consensus 93 ~~l~~l~-----~-~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 93 GLMDALD-----I-EKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred HHHHHcC-----C-CCeeEEEECchHHHHHHHHH
Confidence 4555555 4 56689999999888887764
No 64
>PLN02578 hydrolase
Probab=39.57 E-value=35 Score=32.32 Aligned_cols=20 Identities=45% Similarity=0.464 Sum_probs=16.7
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
+|..++|||+|-+.|..++.
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~ 171 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAV 171 (354)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 67789999999988877764
No 65
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=39.55 E-value=23 Score=31.39 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=15.8
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
++-.++|||+|-+.|-.+..
T Consensus 85 ~~vilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 85 RSVILVGHSMGGLVARSALS 104 (225)
T ss_pred CceEEEEEchhhHHHHHHHh
Confidence 45689999999988876653
No 66
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=39.29 E-value=36 Score=32.17 Aligned_cols=29 Identities=31% Similarity=0.272 Sum_probs=20.9
Q ss_pred HHHHHHhcCCCCcccCc-cEEeecCHHHHHHHHHhc
Q 017236 141 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 141 ~~~l~~~g~~~~~i~~p-~~v~GhS~GE~aAa~~aG 175 (375)
..++...| + .+ ..++|||+|-+.|...+.
T Consensus 117 ~~~~~~l~-----~-~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 117 KLLLDHLG-----I-EQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred HHHHHHcC-----C-CCceEEEEECHHHHHHHHHHH
Confidence 34556666 4 44 789999999888877653
No 67
>PRK10349 carboxylesterase BioH; Provisional
Probab=38.87 E-value=38 Score=29.98 Aligned_cols=20 Identities=30% Similarity=0.229 Sum_probs=16.3
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
++-.++|||+|-..|...+.
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~ 93 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIAL 93 (256)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 55688999999998887763
No 68
>PRK10673 acyl-CoA esterase; Provisional
Probab=38.83 E-value=37 Score=29.89 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=16.7
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
.+-.++|||+|-..|+.++..
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTAL 101 (255)
T ss_pred CceEEEEECHHHHHHHHHHHh
Confidence 456899999999988877643
No 69
>PF03190 Thioredox_DsbH: Protein of unknown function, DUF255; InterPro: IPR004879 This is a group of uncharacterised proteins.; PDB: 3IRA_A.
Probab=38.09 E-value=30 Score=28.98 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=30.8
Q ss_pred HHHHHHHhcCcccH----HHHHHHHHHCCCCEEEEECCCh-h-HHHHHHHhcCC
Q 017236 320 KKILAQQVTSPVQW----ETTVKTLLGKGLKKSYELGPGK-V-IAGIVKRLDKS 367 (375)
Q Consensus 320 ~~~~~~~l~~pV~f----~~av~~l~~~g~~~~ieiGP~~-~-l~~~i~~~l~~ 367 (375)
.-|+.+|..+||+| .++++.+.+.+.-+||.||-.. . +.-+-+++..+
T Consensus 9 Spyl~~ha~~~V~W~~w~~ea~~~Ak~e~KpIfl~ig~~~C~wChvM~~esf~d 62 (163)
T PF03190_consen 9 SPYLRQHAHNPVNWQPWGEEALEKAKKENKPIFLSIGYSWCHWCHVMERESFSD 62 (163)
T ss_dssp -HHHHTTTTSSS--B-SSHHHHHHHHHHT--EEEEEE-TT-HHHHHHHHHTTT-
T ss_pred CHHHHHhccCCCCcccCCHHHHHHHHhcCCcEEEEEEecCCcchhhhcccCcCC
Confidence 56999999999998 5888888888888999999544 3 33344455544
No 70
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=37.34 E-value=2.6e+02 Score=23.75 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=15.9
Q ss_pred CcEEEEecCCCccccccchh
Q 017236 70 PTNAFLFPGQGAQAVGMGKE 89 (375)
Q Consensus 70 ~~~~fvF~GqG~q~~~m~~~ 89 (375)
.+++++-||-|+.-.++...
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~ 38 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGG 38 (177)
T ss_pred CeeEEEcCCCCCCcccccch
Confidence 37899999999987766655
No 71
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=36.99 E-value=50 Score=28.15 Aligned_cols=19 Identities=32% Similarity=0.335 Sum_probs=14.8
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
+.-.++|||+|-..++..+
T Consensus 44 ~~~~~vG~S~Gg~~~~~~a 62 (230)
T PF00561_consen 44 KKINLVGHSMGGMLALEYA 62 (230)
T ss_dssp SSEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEECCChHHHHHHH
Confidence 4468999999987777665
No 72
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=36.71 E-value=42 Score=29.20 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=18.5
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
+.+.+++.| .-+.|+|.|+|-..|+..+
T Consensus 93 l~~~i~~~G-------PfdGvlGFSQGA~lAa~ll 120 (212)
T PF03959_consen 93 LRDYIEENG-------PFDGVLGFSQGAALAALLL 120 (212)
T ss_dssp HHHHHHHH----------SEEEEETHHHHHHHHHH
T ss_pred HHHHHHhcC-------CeEEEEeecHHHHHHHHHH
Confidence 345667776 3589999999977776544
No 73
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=36.38 E-value=38 Score=29.08 Aligned_cols=21 Identities=43% Similarity=0.607 Sum_probs=16.6
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
++-.++|||+|-+.|..++..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CceEEEEeCchHHHHHHHHHH
Confidence 456789999999888877654
No 74
>PRK07581 hypothetical protein; Validated
Probab=35.33 E-value=45 Score=31.21 Aligned_cols=21 Identities=19% Similarity=0.278 Sum_probs=16.3
Q ss_pred Cc-cEEeecCHHHHHHHHHhcc
Q 017236 156 SV-DVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p-~~v~GhS~GE~aAa~~aG~ 176 (375)
++ ..++|||+|-+.|...+-.
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHHH
Confidence 45 4689999999988877643
No 75
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.30 E-value=74 Score=26.14 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHh
Q 017236 135 VTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 135 ~~q~al~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~a 174 (375)
+.+++..+.|.+.+.. ..++.+.|.|.|-+.|+..+
T Consensus 11 ~~~~gvl~~l~~~~~~----~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 11 MYHAGVLSALAERGLL----DCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHHHhCCc----cCCCEEEEEcHHHHHHHHHh
Confidence 4677888888887621 26889999999999999888
No 76
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=35.29 E-value=45 Score=28.91 Aligned_cols=21 Identities=24% Similarity=0.132 Sum_probs=16.9
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
++-.++|||+|-+.|..++..
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred CcEEEEEechhHHHHHHHHHH
Confidence 456899999999888877653
No 77
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=33.74 E-value=34 Score=27.86 Aligned_cols=16 Identities=31% Similarity=0.121 Sum_probs=12.6
Q ss_pred EEeecCHHHHHHHHHh
Q 017236 159 VTCGLSLGEYTALAFA 174 (375)
Q Consensus 159 ~v~GhS~GE~aAa~~a 174 (375)
.++|||+|--.|..++
T Consensus 31 ~v~GHSlGg~lA~l~a 46 (153)
T cd00741 31 HVTGHSLGGALAGLAG 46 (153)
T ss_pred EEEEcCHHHHHHHHHH
Confidence 6899999976666655
No 78
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=33.55 E-value=1.5e+02 Score=28.27 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=47.6
Q ss_pred CccEEeecCHHHHHHHHHhc-------cCChHHHHHHHHHHHHHHHHhhhcCCCe------EE-EE--ecCCHHHHHHHH
Q 017236 156 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAMQEAADAAKGA------MV-SI--IGLDSDKVQQLC 219 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG-------~ls~~dal~l~~~r~~~~~~~~~~~~g~------m~-av--~~~~~~~~~~~l 219 (375)
.+|.+.|-|.|-+.|+..+. .++.+|.+++-..++..+=.. .... ++ .+ ...+.+.+++++
T Consensus 43 ~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~~~iF~~---~~~~~~~~~~~~~~~~~~~y~~~~L~~~L 119 (349)
T cd07214 43 YFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENGPKIFPQ---STGQFEDDRKKLRSLLGPKYDGVYLHDLL 119 (349)
T ss_pred hCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhHHhcCC---CcccchhHHHHHHHhccCccCcHHHHHHH
Confidence 47999999999877777664 267889888776665432110 0000 00 00 124667777777
Q ss_pred HHhccc--cC-CCCceEEEeeeC
Q 017236 220 DAANQE--VD-EDNKVQIANYLC 239 (375)
Q Consensus 220 ~~~~~~--~~-~~~~v~Ia~~Ns 239 (375)
+++-.. +. ....+.|.+++-
T Consensus 120 ~~~~gd~~l~d~~~~v~I~a~dl 142 (349)
T cd07214 120 NELLGDTRLSDTLTNVVIPTFDI 142 (349)
T ss_pred HHHhccccHhhhCCceEEEeEEC
Confidence 665322 11 235677888764
No 79
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=33.36 E-value=52 Score=31.90 Aligned_cols=20 Identities=35% Similarity=0.371 Sum_probs=16.5
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-.++|||+|-+.|+.++.
T Consensus 176 ~~~~lvGhS~GG~la~~~a~ 195 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYAL 195 (402)
T ss_pred CCeEEEEECHHHHHHHHHHH
Confidence 56789999999998887663
No 80
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=33.16 E-value=50 Score=29.96 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=16.1
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
++-.++|||+|-+.+..++.
T Consensus 87 ~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 87 EKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred CCEEEEEECchHHHHHHHHH
Confidence 56689999999988777653
No 81
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=32.97 E-value=37 Score=32.35 Aligned_cols=31 Identities=32% Similarity=0.271 Sum_probs=24.0
Q ss_pred CccEEeecCHHHHHHHHHhccCChHHHHHHH
Q 017236 156 SVDVTCGLSLGEYTALAFAGAFSFEDGLKLV 186 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~ 186 (375)
.+-.++|||+|-++++..+|+-..-+.+.-.
T Consensus 159 ~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~ 189 (365)
T COG4188 159 QRVGVLGHSFGGYTAMELAGAELDAEALLQH 189 (365)
T ss_pred cceEEEecccccHHHHHhccccccHHHHHHH
Confidence 4568999999999999999986555544433
No 82
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=32.93 E-value=33 Score=30.18 Aligned_cols=17 Identities=35% Similarity=0.305 Sum_probs=13.2
Q ss_pred cEEeecCHHHHHHHHHh
Q 017236 158 DVTCGLSLGEYTALAFA 174 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~a 174 (375)
-.+.|||+|--.|..++
T Consensus 130 i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 130 IIVTGHSLGGALASLLA 146 (229)
T ss_pred EEEEccCHHHHHHHHHH
Confidence 37899999987776655
No 83
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.76 E-value=1.3e+02 Score=27.83 Aligned_cols=37 Identities=14% Similarity=0.239 Sum_probs=30.4
Q ss_pred ccEEeecCHHHHHHHHHhc-cCChHHHHHHHHHHHHHH
Q 017236 157 VDVTCGLSLGEYTALAFAG-AFSFEDGLKLVKLRGAAM 193 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~aG-~ls~~dal~l~~~r~~~~ 193 (375)
.|.+.|-|.|-+.|+..+. .++.+|++.+-...+..+
T Consensus 43 fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~~i 80 (309)
T cd07216 43 FDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAKKI 80 (309)
T ss_pred cCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhHHh
Confidence 5899999999999998874 689999988877666443
No 84
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=32.38 E-value=55 Score=31.37 Aligned_cols=30 Identities=33% Similarity=0.359 Sum_probs=21.1
Q ss_pred HHHHHHhcCCCCcccCc-cEEeecCHHHHHHHHHhcc
Q 017236 141 VELLRARDGGQQIIDSV-DVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 141 ~~~l~~~g~~~~~i~~p-~~v~GhS~GE~aAa~~aG~ 176 (375)
..++...| + .+ ..++|||+|-..|...+..
T Consensus 137 ~~~l~~l~-----~-~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 137 ARLLDALG-----I-TRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred HHHHHHhC-----C-CCceEEEEECHHHHHHHHHHHh
Confidence 44556666 4 44 4799999999888776643
No 85
>PRK06489 hypothetical protein; Provisional
Probab=30.64 E-value=75 Score=30.08 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=15.0
Q ss_pred cEEeecCHHHHHHHHHhcc
Q 017236 158 DVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~ 176 (375)
..++|||+|-+.|+..+..
T Consensus 156 ~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 156 RLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3589999999888877643
No 86
>PLN03090 auxin-responsive family protein; Provisional
Probab=29.53 E-value=1.2e+02 Score=23.35 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=25.9
Q ss_pred cEEEEecCCCccccccchhhhccHHHHHHHHHHhhhcCCC
Q 017236 71 TNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFD 110 (375)
Q Consensus 71 ~~~fvF~GqG~q~~~m~~~l~~~p~~r~~~~~~~~~lg~~ 110 (375)
...-|+-|.+....-.--.|.++|.|++.++++.+-+|++
T Consensus 43 G~~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeEfGf~ 82 (104)
T PLN03090 43 GHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFD 82 (104)
T ss_pred CcEEEEECCCCEEEEEEHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3445566654322112223678999999999999877754
No 87
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=29.03 E-value=48 Score=26.07 Aligned_cols=20 Identities=25% Similarity=0.234 Sum_probs=16.4
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-+++|||+|-..++.++.
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHH
T ss_pred CcEEEEEEccCcHHHHHHhh
Confidence 45589999999988887765
No 88
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=29.03 E-value=45 Score=28.50 Aligned_cols=20 Identities=35% Similarity=0.400 Sum_probs=16.4
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-.++|||+|-..|+.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~ 84 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAA 84 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHH
Confidence 56789999999988877664
No 89
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=28.96 E-value=37 Score=32.09 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=14.8
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
.--.++|||+|-|-|+..|
T Consensus 160 ~KmilvGHSfGGYLaa~YA 178 (365)
T KOG4409|consen 160 EKMILVGHSFGGYLAAKYA 178 (365)
T ss_pred cceeEeeccchHHHHHHHH
Confidence 3457999999998777655
No 90
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=28.89 E-value=1.1e+02 Score=23.23 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=28.2
Q ss_pred CcEEEEecCCCccccccchhhhccHHHHHHHHHHhhhcCCC
Q 017236 70 PTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFD 110 (375)
Q Consensus 70 ~~~~fvF~GqG~q~~~m~~~l~~~p~~r~~~~~~~~~lg~~ 110 (375)
...+.|+-|+.-...-.-..|.++|.|++.++++.+-+|++
T Consensus 38 ~G~~~VyVG~~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~ 78 (100)
T PF02519_consen 38 KGHFAVYVGEERRRFVVPVSYLNHPLFQELLEQAEEEFGFD 78 (100)
T ss_pred CCeEEEEeCccceEEEechHHcCchhHHHHHHHHhhhcCcC
Confidence 45777777873332222234778999999999998877654
No 91
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=28.79 E-value=66 Score=30.25 Aligned_cols=20 Identities=30% Similarity=0.312 Sum_probs=16.2
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-.++|||+|-+.|..++.
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~ 216 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAA 216 (371)
T ss_pred ccEEEEeechHHHHHHHHHH
Confidence 45689999999998886664
No 92
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=28.43 E-value=43 Score=30.58 Aligned_cols=21 Identities=24% Similarity=-0.026 Sum_probs=16.6
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
+.-.++|||+|-..|..++..
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~ 132 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKR 132 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHH
Confidence 345799999999998888643
No 93
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=28.18 E-value=20 Score=32.88 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=18.1
Q ss_pred CccEEeecCHHHHHHHHHhccCChH
Q 017236 156 SVDVTCGLSLGEYTALAFAGAFSFE 180 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~ 180 (375)
.+-+++|||+|--.|++.+-.-.+.
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~lp 170 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTLP 170 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhch
Confidence 4568999999987777776544433
No 94
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=27.89 E-value=69 Score=31.59 Aligned_cols=20 Identities=15% Similarity=0.082 Sum_probs=16.7
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
+|-.++|||+|-+.+.+...
T Consensus 162 ~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCEEEEEECHhHHHHHHHHH
Confidence 57789999999988887654
No 95
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=27.79 E-value=70 Score=27.48 Aligned_cols=17 Identities=41% Similarity=0.366 Sum_probs=15.0
Q ss_pred EEeecCHHHHHHHHHhc
Q 017236 159 VTCGLSLGEYTALAFAG 175 (375)
Q Consensus 159 ~v~GhS~GE~aAa~~aG 175 (375)
.++|||.|-+.++.++.
T Consensus 67 ~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 67 GIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEcccccccccchhhc
Confidence 78999999999888875
No 96
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=27.75 E-value=61 Score=28.61 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCCCcccCccEEeecCHHHHHHHHHhc
Q 017236 140 AVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 140 l~~~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG 175 (375)
+.+.++++| .-|.++|.|.|..-+++++|
T Consensus 95 l~~~i~enG-------PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 95 LEDYIKENG-------PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHhC-------CCccccccchhHHHHHHhhc
Confidence 345677777 46899999999877777776
No 97
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=27.72 E-value=62 Score=27.48 Aligned_cols=20 Identities=40% Similarity=0.331 Sum_probs=14.8
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+..++|||+|...+..++-
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~ 107 (282)
T COG0596 88 EKVVLVGHSMGGAVALALAL 107 (282)
T ss_pred CceEEEEecccHHHHHHHHH
Confidence 44789999999766666553
No 98
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=27.40 E-value=1.9e+02 Score=20.05 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHhccccCCCCceEEEee-eCCC---cEEEEcCcchHHHHHH
Q 017236 210 LDSDKVQQLCDAANQEVDEDNKVQIANY-LCPG---NYAVSGGVKGIEAVEA 257 (375)
Q Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~v~Ia~~-Nsp~---~~visG~~~~l~~l~~ 257 (375)
.+.+..+++++.- .+.+.|..+ +++. +++|.||.++|.+|..
T Consensus 9 VDfEY~eEvIRNR------yPelsi~si~d~~f~~~~i~i~GPle~l~~FM~ 54 (75)
T PF05798_consen 9 VDFEYTEEVIRNR------YPELSITSIQDSKFCSIQIVIEGPLEDLTRFMA 54 (75)
T ss_pred eehHhHHHHHHcc------CCceEEEEeecCCcceEEEEEeccHHHHHHHHH
Confidence 3567777777632 566666554 4443 5789999999988864
No 99
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=26.98 E-value=72 Score=32.92 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=31.2
Q ss_pred HHHHHHHhcCcccH----HHHHHHHHHCCCCEEEEECCCh
Q 017236 320 KKILAQQVTSPVQW----ETTVKTLLGKGLKKSYELGPGK 355 (375)
Q Consensus 320 ~~~~~~~l~~pV~f----~~av~~l~~~g~~~~ieiGP~~ 355 (375)
.-|+.++..+||+| .++.+.+.+...-+|+.||=..
T Consensus 15 SpYL~~ha~nPV~W~pW~~eAf~~A~~edkPIflSIGys~ 54 (667)
T COG1331 15 SPYLLQHAHNPVDWYPWGEEAFAKAKEEDKPILLSIGYST 54 (667)
T ss_pred CHHHHhccCCCccccccCHHHHHHHHHhCCCEEEEecccc
Confidence 46999999999999 5888888888888999999654
No 100
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=26.73 E-value=57 Score=28.26 Aligned_cols=18 Identities=33% Similarity=0.377 Sum_probs=14.8
Q ss_pred ccEEeecCHHHHHHHHHh
Q 017236 157 VDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (375)
|-.++|||+|-+-|.-+|
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 779999999988776655
No 101
>PRK05855 short chain dehydrogenase; Validated
Probab=26.68 E-value=90 Score=31.42 Aligned_cols=21 Identities=5% Similarity=-0.145 Sum_probs=15.9
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
+|-.++|||+|-+.+..++..
T Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 94 RPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CcEEEEecChHHHHHHHHHhC
Confidence 567899999999877655443
No 102
>COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis]
Probab=26.52 E-value=77 Score=28.78 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=13.6
Q ss_pred CCCEEEEECCCh-hHHHHHHH
Q 017236 344 GLKKSYELGPGK-VIAGIVKR 363 (375)
Q Consensus 344 g~~~~ieiGP~~-~l~~~i~~ 363 (375)
..+.++|||||. .|+..+-+
T Consensus 30 ~~d~VlEIGpG~GaLT~~Ll~ 50 (259)
T COG0030 30 PGDNVLEIGPGLGALTEPLLE 50 (259)
T ss_pred CCCeEEEECCCCCHHHHHHHh
Confidence 457899999997 45444433
No 103
>PHA02857 monoglyceride lipase; Provisional
Probab=26.40 E-value=49 Score=29.68 Aligned_cols=20 Identities=20% Similarity=0.072 Sum_probs=16.3
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.|-.++|||+|-..|...+.
T Consensus 97 ~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 97 VPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCEEEEEcCchHHHHHHHHH
Confidence 46689999999988887663
No 104
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=26.29 E-value=51 Score=29.14 Aligned_cols=17 Identities=41% Similarity=0.599 Sum_probs=15.2
Q ss_pred cEEeecCHHHHHHHHHh
Q 017236 158 DVTCGLSLGEYTALAFA 174 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~a 174 (375)
.+++|+|+|-+.|+.++
T Consensus 117 ~~i~G~S~GG~~Al~~~ 133 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLA 133 (251)
T ss_dssp EEEEEETHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHH
Confidence 49999999999999876
No 105
>PRK04940 hypothetical protein; Provisional
Probab=26.29 E-value=60 Score=27.69 Aligned_cols=19 Identities=32% Similarity=0.590 Sum_probs=16.3
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
+|..++|+|+|-+=|.+.+
T Consensus 60 ~~~~liGSSLGGyyA~~La 78 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIG 78 (180)
T ss_pred CCcEEEEeChHHHHHHHHH
Confidence 4679999999999888776
No 106
>PLN03219 uncharacterized protein; Provisional
Probab=26.14 E-value=1.7e+02 Score=22.58 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=26.6
Q ss_pred cEEEEecCCCccccc-cch-hhhccHHHHHHHHHHhhhcCCC
Q 017236 71 TNAFLFPGQGAQAVG-MGK-EAQSVPAAAELYKKANDILGFD 110 (375)
Q Consensus 71 ~~~fvF~GqG~q~~~-m~~-~l~~~p~~r~~~~~~~~~lg~~ 110 (375)
...-|+-|++.+... ... .|.++|.|++.++++.+-+|++
T Consensus 42 Gh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEfGf~ 83 (108)
T PLN03219 42 GHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFH 83 (108)
T ss_pred CeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHhCCC
Confidence 455566677432222 222 3678999999999999888764
No 107
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=25.85 E-value=1e+02 Score=26.39 Aligned_cols=17 Identities=41% Similarity=0.415 Sum_probs=15.2
Q ss_pred cEEeecCHHHHHHHHHh
Q 017236 158 DVTCGLSLGEYTALAFA 174 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~a 174 (375)
..++|.|+|-+-|.+.+
T Consensus 61 ~~liGSSlGG~~A~~La 77 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLA 77 (187)
T ss_pred eEEEEEChHHHHHHHHH
Confidence 58999999999999876
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=25.52 E-value=46 Score=30.26 Aligned_cols=22 Identities=27% Similarity=0.372 Sum_probs=16.0
Q ss_pred ccEEeecCHHHHHHHHHhccCC
Q 017236 157 VDVTCGLSLGEYTALAFAGAFS 178 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~aG~ls 178 (375)
+-+++|||+|-|-++-+.-...
T Consensus 85 ~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 85 KLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred cEEEEeCcHHHHHHHHHHHhcc
Confidence 3479999999988876554333
No 109
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=25.28 E-value=92 Score=28.20 Aligned_cols=18 Identities=33% Similarity=0.294 Sum_probs=14.0
Q ss_pred ccEEeecCHHHHHHHHHh
Q 017236 157 VDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (375)
.-.++|||+|-+.|+..+
T Consensus 101 ~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYA 118 (274)
T ss_pred cEEEEEECHHHHHHHHHh
Confidence 346889999988877664
No 110
>PRK05320 rhodanese superfamily protein; Provisional
Probab=25.01 E-value=1.9e+02 Score=26.18 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHh
Q 017236 211 DSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKS 261 (375)
Q Consensus 211 ~~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~ 261 (375)
+.+.+++.+.++-......++++||.. --+.+|||+.+.++.+...++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~G~i~ia~e--GiN~t~~g~~~~id~~~~~l~~ 64 (257)
T PRK05320 16 DPETLRPLVLARCEALGLKGTILLAPE--GINLFLAGTREAIDAFYAWLRA 64 (257)
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCC--CceEEEEeeHHHHHHHHHHHhh
Confidence 345555544444444445788999863 1245889999999999988876
No 111
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=24.88 E-value=60 Score=27.43 Aligned_cols=18 Identities=28% Similarity=0.200 Sum_probs=13.8
Q ss_pred HHHHHhcCCCCcccCccEEeecCH
Q 017236 142 ELLRARDGGQQIIDSVDVTCGLSL 165 (375)
Q Consensus 142 ~~l~~~g~~~~~i~~p~~v~GhS~ 165 (375)
..|++.| + .||.|+|||-
T Consensus 58 ~~L~~~G-----f-~PDvI~~H~G 75 (171)
T PF12000_consen 58 RQLRAQG-----F-VPDVIIAHPG 75 (171)
T ss_pred HHHHHcC-----C-CCCEEEEcCC
Confidence 3466667 5 8999999983
No 112
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=23.88 E-value=90 Score=27.29 Aligned_cols=14 Identities=21% Similarity=0.178 Sum_probs=11.4
Q ss_pred CccEEeecCHHHHH
Q 017236 156 SVDVTCGLSLGEYT 169 (375)
Q Consensus 156 ~p~~v~GhS~GE~a 169 (375)
+|=+++|||+|-.-
T Consensus 95 RPfILaGHSQGs~~ 108 (207)
T PF11288_consen 95 RPFILAGHSQGSMH 108 (207)
T ss_pred CCEEEEEeChHHHH
Confidence 68899999999543
No 113
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=23.68 E-value=53 Score=30.55 Aligned_cols=18 Identities=22% Similarity=0.215 Sum_probs=14.9
Q ss_pred ccEEeecCHHHHHHHHHh
Q 017236 157 VDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (375)
|-.++|||+|-..|+.++
T Consensus 135 ~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 135 PRFLYGESMGGAICLLIH 152 (330)
T ss_pred CEEEEEecchhHHHHHHH
Confidence 568999999998887655
No 114
>PRK03204 haloalkane dehalogenase; Provisional
Probab=23.54 E-value=88 Score=28.48 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=14.6
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
++-.++|||+|-..|...+
T Consensus 101 ~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred CCEEEEEECccHHHHHHHH
Confidence 5678999999987765544
No 115
>PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e.g. KsgA) and the Erythromycin resistance methylases (Erm). The bacterial enzyme KsgA catalyses the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases in 16S rRNA. This enzyme and the resulting modified adenosine bases appear to be conserved in all species of eubacteria, eukaryotes, and archaea, and in eukaryotic organelles. Bacterial resistance to the aminoglycoside antibiotic kasugamycin involves inactivation of KsgA and resulting loss of the dimethylations, with modest consequences to the overall fitness of the organism. In contrast, the yeast ortholog, Dim1, is essential. In Saccharomyces cerevisiae (Baker's yeast), and presumably in other eukaryotes, the enzyme performs a vital role in pre-rRNA processing in addition to its methylating activity. The best conserved region in these enzymes is located in the N-terminal section and corresponds to a region that is probably involved in S-adenosyl methionine (SAM) binding domain. The crystal structure of KsgA from Escherichia coli has been solved to a resolution of 2.1A. It bears a strong similarity to the crystal structure of ErmC' from Bacillus stearothermophilus and a lesser similarity to the yeast mitochondrial transcription factor, sc-mtTFB []. The Erm family of RNA methyltransferases, which methylate a single adenosine base in 23S rRNA confer resistance to the MLS-B group of antibiotics. Despite their sequence similarity, the two enzyme families have strikingly different levels of regulation that remain to be elucidated. Other orthologs, of this family include the yeast and Homo sapiens (Human) mitochondrial transcription factors (MTF1 and h-mtTFB respectively), which are nuclear encoded []. Human-mtTFB is able to stimulate transcription in vitro independently of its S-adenosylmethionine binding and rRNA methyltransferase activity [].; GO: 0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity, 0008649 rRNA methyltransferase activity, 0000154 rRNA modification; PDB: 3FTF_A 3R9X_B 3FTE_A 3FTC_A 3FTD_A 3GRY_A 3FYC_A 3GRU_A 3FYD_A 3GRV_A ....
Probab=23.40 E-value=91 Score=28.20 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=15.8
Q ss_pred CCCEEEEECCCh-hHHHHHHHhc
Q 017236 344 GLKKSYELGPGK-VIAGIVKRLD 365 (375)
Q Consensus 344 g~~~~ieiGP~~-~l~~~i~~~l 365 (375)
..+.+||+|||. .++..+.+..
T Consensus 30 ~~~~VlEiGpG~G~lT~~L~~~~ 52 (262)
T PF00398_consen 30 EGDTVLEIGPGPGALTRELLKRG 52 (262)
T ss_dssp TTSEEEEESSTTSCCHHHHHHHS
T ss_pred CCCEEEEeCCCCccchhhHhccc
Confidence 557899999998 5566555444
No 116
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=23.38 E-value=99 Score=28.41 Aligned_cols=21 Identities=33% Similarity=0.270 Sum_probs=16.5
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
++-.++|||+|-..++..+..
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~ 115 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQT 115 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHH
Confidence 456899999998888777644
No 117
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=23.37 E-value=56 Score=30.77 Aligned_cols=18 Identities=28% Similarity=0.290 Sum_probs=15.0
Q ss_pred ccEEeecCHHHHHHHHHh
Q 017236 157 VDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (375)
|-.++|||+|-..|+.++
T Consensus 163 ~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 163 PSFLFGQSMGGAVALKVH 180 (349)
T ss_pred CEEEEEeccchHHHHHHH
Confidence 668999999988877665
No 118
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=23.31 E-value=59 Score=28.76 Aligned_cols=24 Identities=21% Similarity=-0.062 Sum_probs=18.1
Q ss_pred CccEEeecCHHHHHHHHHhccCCh
Q 017236 156 SVDVTCGLSLGEYTALAFAGAFSF 179 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~ 179 (375)
.+-.+.|||.|-.-|.+++-.++.
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccH
Confidence 345789999999888888765443
No 119
>PRK10566 esterase; Provisional
Probab=23.08 E-value=51 Score=28.99 Aligned_cols=18 Identities=33% Similarity=0.331 Sum_probs=15.0
Q ss_pred ccEEeecCHHHHHHHHHh
Q 017236 157 VDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 157 p~~v~GhS~GE~aAa~~a 174 (375)
.-+++|||+|-+.|+.++
T Consensus 108 ~i~v~G~S~Gg~~al~~~ 125 (249)
T PRK10566 108 RLAVGGASMGGMTALGIM 125 (249)
T ss_pred ceeEEeecccHHHHHHHH
Confidence 348999999998888765
No 120
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=22.41 E-value=91 Score=31.14 Aligned_cols=20 Identities=35% Similarity=0.140 Sum_probs=16.6
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.+-.++|||+|-+.|..++.
T Consensus 274 ~k~~LVGhSmGG~iAl~~A~ 293 (481)
T PLN03087 274 KSFHIVAHSLGCILALALAV 293 (481)
T ss_pred CCEEEEEECHHHHHHHHHHH
Confidence 56789999999998887764
No 121
>PLN00215 predicted protein; Provisional
Probab=22.14 E-value=37 Score=24.41 Aligned_cols=14 Identities=50% Similarity=0.729 Sum_probs=11.7
Q ss_pred cEEEEecCCCcccc
Q 017236 71 TNAFLFPGQGAQAV 84 (375)
Q Consensus 71 ~~~fvF~GqG~q~~ 84 (375)
..+-+.||||.||.
T Consensus 53 saakmipgqggqwv 66 (110)
T PLN00215 53 SAAKMIPGQGGQWV 66 (110)
T ss_pred hhhhccCCCCCeEE
Confidence 45678999999996
No 122
>PRK10749 lysophospholipase L2; Provisional
Probab=22.04 E-value=69 Score=29.92 Aligned_cols=19 Identities=16% Similarity=0.081 Sum_probs=15.2
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
.|-.++|||+|-..|+..+
T Consensus 131 ~~~~l~GhSmGG~ia~~~a 149 (330)
T PRK10749 131 RKRYALAHSMGGAILTLFL 149 (330)
T ss_pred CCeEEEEEcHHHHHHHHHH
Confidence 5678999999988876544
No 123
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.99 E-value=1.5e+02 Score=27.92 Aligned_cols=86 Identities=14% Similarity=0.091 Sum_probs=47.8
Q ss_pred CccEEeecCHHHHHHHHHhc-------cCChHHHHHHHHHHHHHHHHhhhcCC-CeEEEE--ecCCHHHHHHHHHHhccc
Q 017236 156 SVDVTCGLSLGEYTALAFAG-------AFSFEDGLKLVKLRGAAMQEAADAAK-GAMVSI--IGLDSDKVQQLCDAANQE 225 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG-------~ls~~dal~l~~~r~~~~~~~~~~~~-g~m~av--~~~~~~~~~~~l~~~~~~ 225 (375)
..|.+.|-|.|-+.|+..+. .++.++++++-..++..+=....... ..+..+ ...+.+.++++++..-..
T Consensus 40 ~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~~~~IF~~~~~~~~~~~~~~~~~~y~~~~L~~~L~~~fg~ 119 (329)
T cd07215 40 YFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLERGNYIFKKKIWNKIKSRGGFLNEKYSHKPLEEVLLEYFGD 119 (329)
T ss_pred ccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHhhHhhcccchhhhhhhhccccccccCcHHHHHHHHHHhCC
Confidence 46899999999988776542 47889998887666543311100000 000011 124567777777765432
Q ss_pred --cC-CCCceEEEeeeCCC
Q 017236 226 --VD-EDNKVQIANYLCPG 241 (375)
Q Consensus 226 --~~-~~~~v~Ia~~Nsp~ 241 (375)
+. ....+.|.++|-.+
T Consensus 120 ~~l~d~~~~~~i~a~d~~~ 138 (329)
T cd07215 120 TKLSELLKPCLITSYDIER 138 (329)
T ss_pred CchhhhcCCceEEeeecCC
Confidence 11 12346677766443
No 124
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.88 E-value=98 Score=29.13 Aligned_cols=21 Identities=33% Similarity=0.218 Sum_probs=17.4
Q ss_pred CccEEeecCHHHHHHHHHhcc
Q 017236 156 SVDVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ 176 (375)
+|-.++|||+|-+.|..+|-.
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHh
Confidence 677899999999888877644
No 125
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=21.87 E-value=67 Score=26.51 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=18.5
Q ss_pred CccEEeecCHHHHHHHHHhccCChHH
Q 017236 156 SVDVTCGLSLGEYTALAFAGAFSFED 181 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG~ls~~d 181 (375)
.++.+.|-|.|-+.|++.+-..+.++
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~~~~~ 52 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGYDPDE 52 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-TCCC
T ss_pred CccEEEEcChhhhhHHHHHhCCCHHH
Confidence 78999999999999966654444443
No 126
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=21.50 E-value=4.9e+02 Score=24.85 Aligned_cols=94 Identities=19% Similarity=0.123 Sum_probs=46.1
Q ss_pred CCCcEEEEecCCCccccc--cchhhhccHHHHHHHHHHhhhcCCChHHHhhcCCCCcccccccchhHHHHHHHHHHHHHH
Q 017236 68 YKPTNAFLFPGQGAQAVG--MGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR 145 (375)
Q Consensus 68 ~~~~~~fvF~GqG~q~~~--m~~~l~~~p~~r~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~q~~i~~~q~al~~~l~ 145 (375)
+..|-++++-|.|..|.. |... ....+.+..++ ++.++.-+-+++-. .......--.+...-.|+++.|+
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~--~~~~~~~~ak~----~~aNvl~fNYpGVg--~S~G~~s~~dLv~~~~a~v~yL~ 206 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDY--KDDWIQRFAKE----LGANVLVFNYPGVG--SSTGPPSRKDLVKDYQACVRYLR 206 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhcc--ccHHHHHHHHH----cCCcEEEECCCccc--cCCCCCCHHHHHHHHHHHHHHHH
Confidence 445788888898888766 3221 11223333333 33333222111100 00001112334444567778888
Q ss_pred HhcCCCCcccCcc--EEeecCHHHHHHHHH
Q 017236 146 ARDGGQQIIDSVD--VTCGLSLGEYTALAF 173 (375)
Q Consensus 146 ~~g~~~~~i~~p~--~v~GhS~GE~aAa~~ 173 (375)
+...| + +|. ..-|||+|-..++.+
T Consensus 207 d~~~G---~-ka~~Ii~yG~SLGG~Vqa~A 232 (365)
T PF05677_consen 207 DEEQG---P-KAKNIILYGHSLGGGVQAEA 232 (365)
T ss_pred hcccC---C-ChheEEEeeccccHHHHHHH
Confidence 63212 2 454 578999997665543
No 127
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=21.22 E-value=1.7e+02 Score=31.00 Aligned_cols=20 Identities=35% Similarity=0.404 Sum_probs=18.0
Q ss_pred CccEEeecCHHHHHHHHHhc
Q 017236 156 SVDVTCGLSLGEYTALAFAG 175 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~aG 175 (375)
.++++.|.|.|-+.|+..|.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 68999999999998888886
No 128
>PLN03220 uncharacterized protein; Provisional
Probab=21.19 E-value=2.5e+02 Score=21.58 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=18.4
Q ss_pred hhccHHHHHHHHHHhhhcCCC
Q 017236 90 AQSVPAAAELYKKANDILGFD 110 (375)
Q Consensus 90 l~~~p~~r~~~~~~~~~lg~~ 110 (375)
|.++|.|++.++++.+-+|++
T Consensus 61 yL~hP~F~~LL~~AeEEfGf~ 81 (105)
T PLN03220 61 FLNHPSFKEFLSRAEEEFGFN 81 (105)
T ss_pred HcCChHHHHHHHHHHHHhCCC
Confidence 678999999999999888765
No 129
>cd04436 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGAP (GTPase-activator protein) Rgd2-like proteins. Rgd2-like proteins share a common domain architecture, containing, beside the RhoGAP domain, a DEP and a FCH (Fes/CIP4 homology) domain. Yeast Rgd2 is a GAP protein for Cdc42 and Rho5.
Probab=21.03 E-value=2.1e+02 Score=21.05 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=31.8
Q ss_pred HHHHHHHhcCCCCCCCceEEEcCCCCCCCChHHHHHHHHHHhcC
Q 017236 286 SRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTS 329 (375)
Q Consensus 286 ~~~~~~l~~~~~~~p~ipv~S~~~g~~~~~~~~~~~~~~~~l~~ 329 (375)
+-+...++.++..+-++|++.+.. -...++.+.+++.+++-.
T Consensus 4 ~lL~~ml~~ip~~~~kvPilGty~--nt~sG~~Iv~~L~~n~~~ 45 (84)
T cd04436 4 ELLAAMLKEIPLADYKVPILGTYQ--NTSSGSEIVSWLQENMPE 45 (84)
T ss_pred HHHHHHHHhCCCccceeccccccc--CcccHHHHHHHHHHcCCC
Confidence 345667788888899999998654 345667788999998865
No 130
>cd02394 vigilin_like_KH K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has been shown to bind RNA and to associate with both soluble and membrane-bound polyribosomes as a mRNP component. Bicaudal-C is a RNA-binding molecule believed to function in embryonic development at the post-transcriptional level. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=20.64 E-value=1.6e+02 Score=19.59 Aligned_cols=20 Identities=10% Similarity=0.275 Sum_probs=15.2
Q ss_pred CCCcEEEEcCcchHHHHHHH
Q 017236 239 CPGNYAVSGGVKGIEAVEAK 258 (375)
Q Consensus 239 sp~~~visG~~~~l~~l~~~ 258 (375)
..+.++|+|+++.+....+.
T Consensus 41 ~~~~v~I~G~~~~v~~A~~~ 60 (62)
T cd02394 41 KSDTITITGPKENVEKAKEE 60 (62)
T ss_pred CCCEEEEEcCHHHHHHHHHH
Confidence 46789999998888765544
No 131
>PRK01415 hypothetical protein; Validated
Probab=20.51 E-value=2.7e+02 Score=25.10 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhccccCCCCceEEEeeeCCCcEEEEcCcchHHHHHHHHHhc
Q 017236 212 SDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSF 262 (375)
Q Consensus 212 ~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~~visG~~~~l~~l~~~l~~~ 262 (375)
.+.+++.+..+.......+++.||-. --+.+|||+.+.++++.+.++..
T Consensus 19 ~~~~~~~l~~~~~~~~~~G~i~la~E--GIN~tisg~~~~~~~~~~~l~~~ 67 (247)
T PRK01415 19 PANLIPKLLLIGKRKYVRGTILLANE--GFNGSFSGSYENVNLVLEELIKL 67 (247)
T ss_pred HHHHHHHHHHHHHHcCCeeEEEEccC--ccceEeeCCHHHHHHHHHHHHhC
Confidence 34444444444333344678888863 12458999999999999998763
No 132
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=20.45 E-value=3.8e+02 Score=24.47 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=50.1
Q ss_pred hcCCCeEEEEecCCHHHHHHHHHHhccccCCCCceEEEeeeCCCc-------EEEEcCcchHH---HHHHHHH----hcc
Q 017236 198 DAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGN-------YAVSGGVKGIE---AVEAKAK----SFK 263 (375)
Q Consensus 198 ~~~~g~m~av~~~~~~~~~~~l~~~~~~~~~~~~v~Ia~~Nsp~~-------~visG~~~~l~---~l~~~l~----~~~ 263 (375)
...++..+.+.|-+.++++.++. .+.+.+++.|+-.. .......+.+. ++.+.+. ...
T Consensus 54 s~~~~~v~iiSGR~~~~l~~~~~--------v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~p 125 (266)
T COG1877 54 SDPRNVVAIISGRSLAELERLFG--------VPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTP 125 (266)
T ss_pred hcCCCeEEEEeCCCHHHHHHhcC--------CCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCC
Confidence 44677777788999999988875 35666776665332 12223333333 3444333 333
Q ss_pred CcceEEccCCCCCCccchHHHHHHHHHH
Q 017236 264 ARMTVRLAVAGAFHTGFMEPAVSRLEAA 291 (375)
Q Consensus 264 ~~~~~~L~v~~~fHs~~m~~~~~~~~~~ 291 (375)
+.....=+....||...+.+-.......
T Consensus 126 Gs~iE~K~~a~~~Hyr~a~~~~~~~~a~ 153 (266)
T COG1877 126 GSYIERKGFAVALHYRNAEDDEGAALAL 153 (266)
T ss_pred CeEEEEcCcEEEEeeccCCchhhHHHHH
Confidence 3333444567899998887655444433
No 133
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.40 E-value=68 Score=33.81 Aligned_cols=20 Identities=25% Similarity=0.124 Sum_probs=16.1
Q ss_pred cEEeecCHHHHHHHHHhccC
Q 017236 158 DVTCGLSLGEYTALAFAGAF 177 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~l 177 (375)
-+++|||+|-+.|-+..-.-
T Consensus 184 VILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 184 VILVGHSMGGIVARATLTLK 203 (973)
T ss_pred EEEEeccchhHHHHHHHhhh
Confidence 37899999999998876544
No 134
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=20.39 E-value=75 Score=29.42 Aligned_cols=19 Identities=26% Similarity=0.256 Sum_probs=14.7
Q ss_pred CccEEeecCHHHHHHHHHh
Q 017236 156 SVDVTCGLSLGEYTALAFA 174 (375)
Q Consensus 156 ~p~~v~GhS~GE~aAa~~a 174 (375)
.|-+++|||+|-+.|+...
T Consensus 107 ~p~~l~gHSmGg~Ia~~~~ 125 (298)
T COG2267 107 LPVFLLGHSMGGLIALLYL 125 (298)
T ss_pred CCeEEEEeCcHHHHHHHHH
Confidence 5779999999977666543
No 135
>PLN00021 chlorophyllase
Probab=20.32 E-value=62 Score=30.24 Aligned_cols=20 Identities=35% Similarity=0.172 Sum_probs=16.6
Q ss_pred cEEeecCHHHHHHHHHhccC
Q 017236 158 DVTCGLSLGEYTALAFAGAF 177 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~l 177 (375)
-.++|||+|-..|+.++...
T Consensus 128 v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGK 147 (313)
T ss_pred eEEEEECcchHHHHHHHhhc
Confidence 47999999999998887543
No 136
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=20.22 E-value=38 Score=31.61 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=15.8
Q ss_pred cEEeecCHHHHHHHHHhcc
Q 017236 158 DVTCGLSLGEYTALAFAGA 176 (375)
Q Consensus 158 ~~v~GhS~GE~aAa~~aG~ 176 (375)
.+|+|||+|--+++..++.
T Consensus 243 ~aViGHSFGgAT~i~~ss~ 261 (399)
T KOG3847|consen 243 AAVIGHSFGGATSIASSSS 261 (399)
T ss_pred hhheeccccchhhhhhhcc
Confidence 4799999998888887765
Done!