Query 017239
Match_columns 375
No_of_seqs 289 out of 2218
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:49:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017239.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017239hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2557 Uncharacterized conser 100.0 2.2E-45 4.7E-50 331.9 20.0 361 1-372 1-368 (427)
2 KOG2372 Oxidation resistance p 100.0 1.5E-37 3.3E-42 265.4 12.7 156 212-373 72-231 (241)
3 smart00584 TLDc domain in TBC 100.0 4.9E-35 1.1E-39 250.6 15.7 150 217-372 2-154 (165)
4 COG5142 OXR1 Oxidation resista 100.0 4.4E-30 9.6E-35 209.3 8.3 154 215-374 33-202 (212)
5 PF07534 TLD: TLD; InterPro: 99.9 1.8E-25 4E-30 186.4 10.4 120 241-367 1-121 (139)
6 KOG0044 Ca2+ sensor (EF-Hand s 99.9 5E-23 1.1E-27 177.2 14.7 178 1-191 1-187 (193)
7 KOG0034 Ca2+/calmodulin-depend 99.9 1.4E-22 3E-27 174.5 16.2 175 1-189 1-185 (187)
8 KOG4636 Uncharacterized conser 99.9 4.9E-22 1.1E-26 180.6 18.8 241 112-357 143-414 (483)
9 COG5126 FRQ1 Ca2+-binding prot 99.8 1.2E-19 2.5E-24 151.1 15.6 145 15-182 9-159 (160)
10 KOG0038 Ca2+-binding kinase in 99.8 2.4E-19 5.2E-24 143.0 12.9 172 1-186 1-184 (189)
11 KOG2801 Probable Rab-GAPs [Int 99.6 3.9E-17 8.5E-22 145.5 1.6 151 216-368 342-540 (559)
12 KOG0027 Calmodulin and related 99.6 1.3E-14 2.8E-19 122.6 14.6 138 20-179 2-149 (151)
13 PTZ00183 centrin; Provisional 99.6 3.2E-14 6.9E-19 120.8 17.0 142 19-182 10-157 (158)
14 PTZ00184 calmodulin; Provision 99.6 7.5E-14 1.6E-18 117.1 15.6 138 19-178 4-147 (149)
15 KOG0028 Ca2+-binding protein ( 99.4 8.1E-12 1.8E-16 102.1 14.3 142 17-180 24-171 (172)
16 KOG0031 Myosin regulatory ligh 99.4 2.2E-11 4.8E-16 98.8 13.5 138 19-178 25-164 (171)
17 KOG0036 Predicted mitochondria 99.2 2.4E-10 5.2E-15 106.7 13.9 136 19-181 7-148 (463)
18 KOG0037 Ca2+-binding protein, 99.2 1.3E-09 2.8E-14 94.1 14.5 139 24-190 55-199 (221)
19 KOG0030 Myosin essential light 99.1 6.6E-10 1.4E-14 88.8 11.5 137 19-178 4-150 (152)
20 PLN02964 phosphatidylserine de 99.1 7.6E-10 1.6E-14 112.0 11.4 114 7-125 120-243 (644)
21 KOG2562 Protein phosphatase 2 98.8 3.7E-08 8E-13 93.6 12.0 157 15-185 267-429 (493)
22 COG5126 FRQ1 Ca2+-binding prot 98.7 1.3E-07 2.9E-12 79.1 9.9 99 19-125 52-156 (160)
23 KOG4666 Predicted phosphate ac 98.6 5.5E-08 1.2E-12 88.3 6.8 151 20-192 220-372 (412)
24 PF13499 EF-hand_7: EF-hand do 98.6 3.5E-08 7.6E-13 70.8 4.3 66 98-177 1-66 (66)
25 KOG0027 Calmodulin and related 98.6 4.9E-07 1.1E-11 76.3 9.7 99 19-124 40-148 (151)
26 PTZ00183 centrin; Provisional 98.5 5.5E-07 1.2E-11 76.1 9.8 95 27-125 54-154 (158)
27 KOG4223 Reticulocalbin, calume 98.5 1E-06 2.3E-11 80.5 10.8 132 22-175 159-301 (325)
28 PF13499 EF-hand_7: EF-hand do 98.5 3.4E-07 7.4E-12 65.6 5.8 60 63-123 3-66 (66)
29 PTZ00184 calmodulin; Provision 98.4 1.9E-06 4.2E-11 71.8 10.5 94 27-124 48-147 (149)
30 KOG0044 Ca2+ sensor (EF-Hand s 98.4 1.2E-06 2.7E-11 75.9 8.8 96 26-125 64-175 (193)
31 smart00027 EH Eps15 homology d 98.3 1.4E-06 3E-11 67.5 6.6 68 19-90 3-73 (96)
32 KOG0037 Ca2+-binding protein, 98.3 1E-05 2.2E-10 70.2 11.8 141 8-178 74-219 (221)
33 cd05022 S-100A13 S-100A13: S-1 98.2 3.6E-06 7.8E-11 64.0 6.9 65 22-90 4-76 (89)
34 cd05027 S-100B S-100B: S-100B 98.2 9.4E-06 2E-10 61.7 8.4 70 97-179 8-79 (88)
35 cd05026 S-100Z S-100Z: S-100Z 98.2 1.3E-05 2.7E-10 61.8 8.5 70 97-179 10-81 (93)
36 cd05026 S-100Z S-100Z: S-100Z 98.1 9.4E-06 2E-10 62.4 7.0 65 22-90 6-82 (93)
37 cd00213 S-100 S-100: S-100 dom 98.1 1.2E-05 2.7E-10 61.1 7.3 65 22-90 4-80 (88)
38 KOG0034 Ca2+/calmodulin-depend 98.1 1.5E-05 3.3E-10 69.0 8.2 103 19-125 50-175 (187)
39 cd05025 S-100A1 S-100A1: S-100 98.1 2.7E-05 5.9E-10 59.7 8.7 71 96-179 8-80 (92)
40 cd05025 S-100A1 S-100A1: S-100 98.1 1.4E-05 3E-10 61.4 6.9 63 24-90 7-81 (92)
41 cd00051 EFh EF-hand, calcium b 98.1 1.8E-05 3.8E-10 54.9 6.9 61 62-123 2-62 (63)
42 cd05029 S-100A6 S-100A6: S-100 98.0 2.8E-05 6.1E-10 59.1 7.9 67 22-90 6-80 (88)
43 cd05023 S-100A11 S-100A11: S-1 98.0 1.9E-05 4.1E-10 60.1 6.6 66 22-90 5-81 (89)
44 cd05031 S-100A10_like S-100A10 98.0 4E-05 8.8E-10 59.0 8.5 72 96-180 7-80 (94)
45 cd00052 EH Eps15 homology doma 98.0 1.9E-05 4.2E-10 56.3 6.0 59 64-125 3-61 (67)
46 cd05022 S-100A13 S-100A13: S-1 97.9 5.5E-05 1.2E-09 57.5 8.1 67 62-129 10-79 (89)
47 PF13833 EF-hand_8: EF-hand do 97.9 2.7E-05 5.9E-10 53.3 5.9 51 75-125 2-53 (54)
48 cd05029 S-100A6 S-100A6: S-100 97.9 5.1E-05 1.1E-09 57.7 7.9 67 98-179 11-79 (88)
49 cd05031 S-100A10_like S-100A10 97.9 3.6E-05 7.8E-10 59.3 6.9 60 25-88 7-78 (94)
50 KOG4223 Reticulocalbin, calume 97.9 8.7E-05 1.9E-09 68.2 10.0 136 24-180 75-229 (325)
51 cd00052 EH Eps15 homology doma 97.9 7.3E-05 1.6E-09 53.3 7.4 58 29-90 2-62 (67)
52 cd05023 S-100A11 S-100A11: S-1 97.9 0.00011 2.3E-09 56.0 8.6 70 97-179 9-80 (89)
53 cd05027 S-100B S-100B: S-100B 97.9 0.00011 2.3E-09 55.9 8.5 63 23-89 5-79 (88)
54 cd00252 SPARC_EC SPARC_EC; ext 97.9 5.4E-05 1.2E-09 60.5 7.1 59 60-123 48-106 (116)
55 cd00213 S-100 S-100: S-100 dom 97.9 0.00011 2.3E-09 55.9 8.4 71 96-179 7-79 (88)
56 cd05024 S-100A10 S-100A10: A s 97.8 7.5E-05 1.6E-09 56.5 6.8 64 22-90 4-77 (91)
57 KOG0377 Protein serine/threoni 97.8 0.00023 4.9E-09 67.8 11.5 134 27-179 465-615 (631)
58 KOG0028 Ca2+-binding protein ( 97.8 0.00015 3.3E-09 59.9 9.0 102 17-125 61-170 (172)
59 cd05030 calgranulins Calgranul 97.8 0.00011 2.3E-09 56.0 7.5 67 22-90 4-80 (88)
60 smart00027 EH Eps15 homology d 97.8 0.00016 3.6E-09 55.8 8.5 66 61-129 11-76 (96)
61 KOG2643 Ca2+ binding protein, 97.8 4.3E-05 9.4E-10 72.6 5.9 128 45-179 161-314 (489)
62 PF00036 EF-hand_1: EF hand; 97.8 2.4E-05 5.2E-10 46.1 2.7 27 99-125 2-28 (29)
63 PLN02964 phosphatidylserine de 97.7 0.00026 5.6E-09 72.4 11.2 112 45-179 120-243 (644)
64 KOG0036 Predicted mitochondria 97.7 0.00014 3.1E-09 68.8 8.5 95 26-124 51-145 (463)
65 cd00051 EFh EF-hand, calcium b 97.7 0.00012 2.7E-09 50.4 6.5 61 99-177 2-62 (63)
66 cd00252 SPARC_EC SPARC_EC; ext 97.7 0.00016 3.4E-09 57.8 7.1 65 19-87 41-106 (116)
67 PF00036 EF-hand_1: EF hand; 97.5 0.00019 4.1E-09 42.3 3.8 27 62-89 2-28 (29)
68 PF13833 EF-hand_8: EF-hand do 97.5 0.00028 6.1E-09 48.1 5.0 45 43-88 2-52 (54)
69 KOG4347 GTPase-activating prot 97.4 0.00047 1E-08 68.8 8.3 104 14-119 492-612 (671)
70 KOG0041 Predicted Ca2+-binding 97.4 0.0009 2E-08 57.3 8.7 101 19-123 92-201 (244)
71 KOG2643 Ca2+ binding protein, 97.4 0.0016 3.6E-08 62.1 11.1 129 28-180 235-385 (489)
72 PF13405 EF-hand_6: EF-hand do 97.4 0.00016 3.4E-09 43.3 2.8 27 98-124 1-27 (31)
73 PF12763 EF-hand_4: Cytoskelet 97.3 0.00027 5.8E-09 55.3 4.0 67 19-90 3-72 (104)
74 KOG0751 Mitochondrial aspartat 97.2 0.0048 1E-07 59.8 11.9 99 24-125 31-136 (694)
75 PF13202 EF-hand_5: EF hand; P 97.2 0.00037 8E-09 39.5 2.7 24 100-123 2-25 (25)
76 PF14658 EF-hand_9: EF-hand do 97.1 0.0017 3.6E-08 45.9 5.7 61 64-125 2-64 (66)
77 cd05030 calgranulins Calgranul 97.0 0.0039 8.5E-08 47.3 7.4 67 62-128 10-82 (88)
78 KOG0040 Ca2+-binding actin-bun 97.0 0.011 2.4E-07 64.1 12.9 101 18-123 2245-2359(2399)
79 PRK12309 transaldolase/EF-hand 96.9 0.0036 7.8E-08 60.7 8.3 56 59-128 333-388 (391)
80 PF09069 EF-hand_3: EF-hand; 96.9 0.0033 7.1E-08 47.6 6.2 84 96-190 2-86 (90)
81 PF14658 EF-hand_9: EF-hand do 96.9 0.0038 8.3E-08 44.1 5.9 63 101-179 2-64 (66)
82 cd05024 S-100A10 S-100A10: A s 96.8 0.012 2.6E-07 44.6 8.6 68 98-179 9-76 (91)
83 KOG0038 Ca2+-binding kinase in 96.7 0.0052 1.1E-07 50.1 6.3 83 42-125 84-177 (189)
84 KOG0031 Myosin regulatory ligh 96.6 0.029 6.3E-07 46.3 10.0 82 42-124 77-164 (171)
85 KOG0030 Myosin essential light 96.4 0.057 1.2E-06 43.9 10.3 104 60-179 11-116 (152)
86 PF13202 EF-hand_5: EF hand; P 96.2 0.0086 1.9E-07 33.8 3.4 23 63-86 2-24 (25)
87 KOG0041 Predicted Ca2+-binding 96.1 0.023 4.9E-07 48.9 7.1 67 61-128 100-166 (244)
88 KOG0377 Protein serine/threoni 96.0 0.018 3.8E-07 55.3 6.9 64 62-126 549-616 (631)
89 PRK12309 transaldolase/EF-hand 96.0 0.013 2.9E-07 56.8 6.1 52 27-90 335-386 (391)
90 KOG4065 Uncharacterized conser 96.0 0.039 8.5E-07 43.1 7.2 79 94-176 64-142 (144)
91 PF14788 EF-hand_10: EF hand; 95.9 0.035 7.7E-07 37.0 5.7 47 78-124 2-48 (51)
92 PF13405 EF-hand_6: EF-hand do 95.7 0.019 4.1E-07 34.1 3.8 25 63-88 3-27 (31)
93 KOG0046 Ca2+-binding actin-bun 95.7 0.023 5E-07 55.7 6.0 66 17-87 10-83 (627)
94 KOG4251 Calcium binding protei 95.6 0.067 1.5E-06 47.5 8.0 134 24-178 99-263 (362)
95 KOG0169 Phosphoinositide-speci 95.4 0.2 4.3E-06 51.6 12.0 141 19-179 129-274 (746)
96 KOG4251 Calcium binding protei 95.4 0.061 1.3E-06 47.8 7.1 115 42-175 212-341 (362)
97 PF08414 NADPH_Ox: Respiratory 95.2 0.051 1.1E-06 41.4 5.4 66 24-94 28-97 (100)
98 KOG2562 Protein phosphatase 2 94.7 0.16 3.5E-06 49.3 8.6 129 30-179 178-343 (493)
99 PF14788 EF-hand_10: EF hand; 94.7 0.062 1.3E-06 35.9 4.0 44 46-90 2-50 (51)
100 smart00054 EFh EF-hand, calciu 94.7 0.051 1.1E-06 30.4 3.3 27 99-125 2-28 (29)
101 PF10591 SPARC_Ca_bdg: Secrete 94.2 0.055 1.2E-06 43.0 3.7 60 59-121 53-112 (113)
102 PF10591 SPARC_Ca_bdg: Secrete 94.1 0.028 6E-07 44.8 1.7 62 20-85 48-112 (113)
103 KOG0751 Mitochondrial aspartat 94.1 0.74 1.6E-05 45.2 11.4 84 42-126 87-208 (694)
104 PF12763 EF-hand_4: Cytoskelet 93.8 0.31 6.7E-06 38.1 7.0 63 62-128 12-74 (104)
105 smart00054 EFh EF-hand, calciu 92.8 0.19 4.1E-06 27.9 3.5 25 63-88 3-27 (29)
106 KOG4286 Dystrophin-like protei 88.4 2 4.4E-05 44.3 8.0 118 63-190 473-591 (966)
107 KOG1955 Ral-GTPase effector RA 88.0 0.98 2.1E-05 44.3 5.4 69 19-91 224-295 (737)
108 PF09279 EF-hand_like: Phospho 85.3 1.5 3.2E-05 32.5 4.1 67 99-179 2-69 (83)
109 PF09279 EF-hand_like: Phospho 85.2 1.7 3.7E-05 32.1 4.4 56 28-88 2-68 (83)
110 KOG1707 Predicted Ras related/ 85.0 6.5 0.00014 39.9 9.4 107 17-126 186-344 (625)
111 KOG0040 Ca2+-binding actin-bun 84.3 1.8 3.9E-05 48.1 5.5 110 63-192 2256-2372(2399)
112 KOG4578 Uncharacterized conser 84.1 0.85 1.8E-05 42.4 2.7 64 61-125 334-398 (421)
113 KOG3866 DNA-binding protein of 82.7 1.3 2.9E-05 40.8 3.4 74 102-179 249-324 (442)
114 KOG0046 Ca2+-binding actin-bun 82.7 4.2 9.1E-05 40.5 6.9 66 98-179 20-85 (627)
115 KOG4065 Uncharacterized conser 82.1 2.9 6.4E-05 32.9 4.6 58 64-122 71-142 (144)
116 KOG0039 Ferric reductase, NADH 80.7 4.8 0.0001 42.1 7.1 91 75-182 2-92 (646)
117 KOG1029 Endocytic adaptor prot 78.1 5.6 0.00012 41.4 6.3 66 19-89 9-77 (1118)
118 PF05517 p25-alpha: p25-alpha 77.8 6 0.00013 33.2 5.6 62 28-90 1-70 (154)
119 PLN02952 phosphoinositide phos 75.4 18 0.0004 37.3 9.3 92 75-179 14-110 (599)
120 KOG3555 Ca2+-binding proteogly 74.7 7.4 0.00016 36.7 5.7 98 20-125 201-310 (434)
121 KOG3555 Ca2+-binding proteogly 73.1 5.8 0.00013 37.4 4.6 62 96-179 249-310 (434)
122 KOG1265 Phospholipase C [Lipid 72.6 74 0.0016 34.2 12.6 129 42-179 161-299 (1189)
123 KOG0042 Glycerol-3-phosphate d 72.5 6.9 0.00015 39.5 5.2 74 19-96 586-664 (680)
124 KOG4666 Predicted phosphate ac 72.2 8.1 0.00017 36.2 5.3 95 26-125 259-359 (412)
125 KOG0169 Phosphoinositide-speci 70.9 32 0.0007 36.0 9.7 65 60-125 136-200 (746)
126 KOG0035 Ca2+-binding actin-bun 70.2 27 0.00058 37.5 9.2 100 17-121 738-848 (890)
127 PF09068 EF-hand_2: EF hand; 69.5 13 0.00028 30.1 5.5 30 96-125 96-125 (127)
128 PF08726 EFhand_Ca_insen: Ca2+ 66.9 6.5 0.00014 28.2 2.8 54 26-85 6-65 (69)
129 KOG4578 Uncharacterized conser 62.5 5.4 0.00012 37.3 2.2 69 96-181 332-400 (421)
130 KOG4301 Beta-dystrobrevin [Cyt 57.1 29 0.00062 32.8 5.8 111 63-187 113-225 (434)
131 PF01023 S_100: S-100/ICaBP ty 55.2 23 0.0005 22.8 3.6 34 23-57 3-36 (44)
132 PF14513 DAG_kinase_N: Diacylg 53.7 32 0.0007 28.3 5.1 36 75-110 46-82 (138)
133 PF00404 Dockerin_1: Dockerin 52.7 17 0.00037 19.5 2.2 18 107-124 1-18 (21)
134 KOG1707 Predicted Ras related/ 52.6 22 0.00048 36.2 4.7 91 16-110 305-399 (625)
135 PF08726 EFhand_Ca_insen: Ca2+ 51.7 14 0.00029 26.5 2.3 29 95-124 4-32 (69)
136 cd07313 terB_like_2 tellurium 50.9 61 0.0013 24.7 6.2 78 43-123 13-98 (104)
137 PF12174 RST: RCD1-SRO-TAF4 (R 50.0 22 0.00048 25.5 3.2 51 75-128 6-56 (70)
138 TIGR01848 PHA_reg_PhaR polyhyd 46.7 43 0.00094 26.1 4.5 68 104-179 10-77 (107)
139 KOG1029 Endocytic adaptor prot 46.2 23 0.00049 37.2 3.7 64 23-90 192-258 (1118)
140 PF05042 Caleosin: Caleosin re 44.1 76 0.0016 27.1 6.0 61 63-125 99-166 (174)
141 KOG2243 Ca2+ release channel ( 43.4 63 0.0014 36.5 6.4 59 102-179 4062-4120(5019)
142 PF06163 DUF977: Bacterial pro 42.4 95 0.0021 25.1 5.9 52 18-73 3-54 (127)
143 TIGR02675 tape_meas_nterm tape 39.2 59 0.0013 23.5 4.1 48 18-70 8-55 (75)
144 PF08414 NADPH_Ox: Respiratory 38.4 63 0.0014 24.9 4.2 62 98-179 31-92 (100)
145 PF07879 PHB_acc_N: PHB/PHA ac 38.2 27 0.00058 24.5 2.0 22 104-125 10-31 (64)
146 PF13720 Acetyltransf_11: Udp 31.9 1.2E+02 0.0027 22.4 4.9 49 17-71 25-76 (83)
147 KOG2243 Ca2+ release channel ( 30.7 65 0.0014 36.4 4.2 44 42-86 4070-4117(5019)
148 PF05042 Caleosin: Caleosin re 29.6 86 0.0019 26.8 4.1 30 96-125 95-124 (174)
149 PF04783 DUF630: Protein of un 29.0 45 0.00098 23.1 1.9 16 1-16 1-16 (60)
150 cd07316 terB_like_DjlA N-termi 27.4 2.7E+02 0.0059 20.9 7.3 58 62-122 38-98 (106)
151 smart00549 TAFH TAF homology. 26.0 2.7E+02 0.0059 21.1 5.7 48 118-179 4-51 (92)
152 PF13171 DUF4004: Protein of u 24.0 5E+02 0.011 22.8 8.0 91 14-128 41-147 (199)
153 TIGR01321 TrpR trp operon repr 23.6 2.8E+02 0.006 21.2 5.5 60 19-85 32-91 (94)
154 KOG1955 Ral-GTPase effector RA 22.3 1.2E+02 0.0026 30.4 4.1 63 63-128 234-296 (737)
155 PLN02952 phosphoinositide phos 22.1 4.4E+02 0.0095 27.5 8.3 81 42-124 13-109 (599)
156 KOG3866 DNA-binding protein of 22.0 1.6E+02 0.0034 27.7 4.6 104 19-123 194-322 (442)
157 PF09107 SelB-wing_3: Elongati 21.5 1.2E+02 0.0025 20.2 2.8 31 43-73 8-38 (50)
158 cd08327 CARD_RAIDD Caspase act 20.5 2.4E+02 0.0052 21.5 4.7 57 110-189 32-88 (94)
159 PRK12461 UDP-N-acetylglucosami 20.5 2.3E+02 0.0051 25.8 5.5 51 16-72 196-249 (255)
160 COG1043 LpxA Acyl-[acyl carrie 20.0 2.9E+02 0.0062 25.2 5.7 52 16-73 201-255 (260)
No 1
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=100.00 E-value=2.2e-45 Score=331.85 Aligned_cols=361 Identities=45% Similarity=0.720 Sum_probs=280.7
Q ss_pred CCCCCCCCCCcccccccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCC
Q 017239 1 MGNSQPPPANPRFVSASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRN 74 (375)
Q Consensus 1 MG~~~s~~~~~~l~~~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~ 74 (375)
|||..|+... ....+.++...|....+..... ...+.+.+.+..++... ....+++|......+.
T Consensus 1 mgn~n~kr~~------~~~~naE~~~~l~~~kk~~~~g---a~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~~~q 71 (427)
T KOG2557|consen 1 MGNSNSKRVD------HRFINAETQKKLDDLKKLFVSG---ASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQRRQ 71 (427)
T ss_pred CCCccccccc------ccccCHHHHHHHHHHhhccccc---cchhhhhhhhhhcccccchhhhhhhccceEeeeccCccC
Confidence 8998887622 1134455444444444433221 22456667676665442 2234566665544332
Q ss_pred CcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhc
Q 017239 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 154 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 154 (375)
+..+.++.++.......++..+++++.++...|.+++|....+++.+.+..++...+..+.+......-......+....
T Consensus 72 ~~~~~l~k~~~~~~~~~~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~~~ 151 (427)
T KOG2557|consen 72 DDKMTLEKLVIAKATYEKGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLNAA 151 (427)
T ss_pred CccchHHHHhhHHhhhccCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhheeeecccchhhhhhhhhhccccchh
Confidence 56899999999999899999999999999999999999999999999999988876553332211111111222222211
Q ss_pred cccccCccCCCCCCCHHHHHHHHHhcchHHHHhhcccCCCCCCCCCCCCCcccCCCCCCcCccccCHHHHHHHHhcCCCC
Q 017239 155 TFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLTPPDPGRPGCQVPRLLCSENVHSSMLLLRKEYAWHIGGALSPH 234 (375)
Q Consensus 155 ~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ll~~~~~~~~~~~~p~l~~~~~~~~~~~il~~~~~~~l~~~lp~~ 234 (375)
.+.+.+. .-.+...++.|++|+...|.+.+++.+.|.++....+...+|-|+..+..++...++..++++.|..+||..
T Consensus 152 ~~~ke~e-~t~p~~~le~~~s~~p~f~~i~r~~fs~L~~~~g~sk~pil~~l~~~~~~sh~~~~i~~~~~l~in~~lp~~ 230 (427)
T KOG2557|consen 152 TFSKEDE-GTEPGMSLEDFRSWCPFFPTIRKFLFSLLMPPSGVSKGPILPHLLYEDSVSHDRLLIKKEYALHINGALPHH 230 (427)
T ss_pred hhccccc-cCCCchhHHHHhhhchHHHHHHHHHHHHhccccCCccCccccccccccccccccceeecchhheecccCCcc
Confidence 2222211 123457888899998888899999888888777666666777777777777778888899999999999999
Q ss_pred ccCCceEeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccCCCeecCCcEEEEEEcCCceeecCCC
Q 017239 235 ELEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPTG 314 (375)
Q Consensus 235 ~~~~~~lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~~~~~g~~~~flF~l~p~~~~~~~~~ 314 (375)
...+|++||+++.||.|+++|..++.+. |||++||++++++|||+|+|++|...+.|+||.+||||+|.|+..||+.||
T Consensus 231 ~r~~wr~lysss~~gqsfSt~l~~~~~~-gp~v~vI~d~d~~vFGgyASq~we~~pQF~Gd~~~fLfqL~Pkma~y~aTg 309 (427)
T KOG2557|consen 231 ERVEWKLLYSSSVHGQSFSTFLGHTSGM-GPSVLIIKDTEGYVFGGYASQPWERYPQFYGDMKSFLFQLNPKMAIYRATG 309 (427)
T ss_pred hhhceeeeeeecccccchhhhhhhccCC-CCeEEEEEcCCCceecccccCcccccCccCCccceeeeeecchheeecccC
Confidence 9999999999999999999999999977 999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEccCCCCCcceeeeecccCcceeEecccccCccccCccCcC-ccccCCCccc
Q 017239 315 ANSNLQWQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSPIPHLA-TLVFPRPAKY 372 (375)
Q Consensus 315 ~~~~~~~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~~~~~-~~~~~~~~~~ 372 (375)
.|++|+|+|.++...|.||++||..+.|+||||.+|.+|.|-||.|.+ -.-|++.++|
T Consensus 310 yn~~yqylN~~QQtiPNGLGmGGq~n~fgL~Id~sFg~Gqs~e~cTty~spqLSk~~~f 368 (427)
T KOG2557|consen 310 YNTNYQYLNFTQQTIPNGLGMGGQINHFGLFIDASFGQGQSFECCTTYESPQLSKTSRF 368 (427)
T ss_pred CccceEEeccccccCCCccccCcccceeeEEEEeecCCCccccccccCCCccccccccc
Confidence 999999999999999999999999999999999999999999966655 5567776665
No 2
>KOG2372 consensus Oxidation resistance protein [Replication, recombination and repair]
Probab=100.00 E-value=1.5e-37 Score=265.38 Aligned_cols=156 Identities=22% Similarity=0.440 Sum_probs=147.0
Q ss_pred CCcCccccCHHHHHHHHhcCCCCc-cC-CceEeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccC
Q 017239 212 VHSSMLLLRKEYAWHIGGALSPHE-LE-EWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERH 289 (375)
Q Consensus 212 ~~~~~~il~~~~~~~l~~~lp~~~-~~-~~~lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~ 289 (375)
....+.||+++++..|..+||.+. .. .|+|+||+.+||+|+++||+++..-..|.|+|||+++|.|||||++++++++
T Consensus 72 ~~~~~~ll~~~~~~~l~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~vFGa~~~~~i~p~ 151 (241)
T KOG2372|consen 72 LRYKSQLLTPEMIRQLREHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGDVFGAFVSDAIRPN 151 (241)
T ss_pred cccccccCCHHHHHHHHhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCCEeeEeeccceecc
Confidence 334578999999999999999996 44 9999999999999999999999998899999999999999999999999999
Q ss_pred CCeecCCcEEEEEEcC--CceeecCCCCCCceEEEccCCCCCcceeeeecccCcceeEecccccCccccCccCcCccccC
Q 017239 290 GDFYGDMKSFLFQLYP--KLAIYRPTGANSNLQWQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSPIPHLATLVFP 367 (375)
Q Consensus 290 ~~~~g~~~~flF~l~p--~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~~~~~~~~~~ 367 (375)
.+|||+++||||++.| ++++|+|||.|+.|+||+.. .|.+|++++.|+||||.+|.+|.|+||+||+|++|+
T Consensus 152 dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~~d------fLa~G~GgGRfgLwLD~dL~~G~S~~ceTFgN~~Ls 225 (241)
T KOG2372|consen 152 DHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCDKD------FLAFGGGGGRFGLWLDGDLLHGSSHPCETFGNEPLS 225 (241)
T ss_pred CCcCCCCCeEEEEecCCCceeEeeecCCcceEEEechh------HhhhcCCCCceEEEecccccccccCCCcccCCcccC
Confidence 9999999999999999 89999999999999999985 377888888999999999999999999999999999
Q ss_pred CCcccc
Q 017239 368 RPAKYI 373 (375)
Q Consensus 368 ~~~~~~ 373 (375)
.++.|+
T Consensus 226 ~~qdF~ 231 (241)
T KOG2372|consen 226 DKQDFI 231 (241)
T ss_pred CcCceE
Confidence 999886
No 3
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=100.00 E-value=4.9e-35 Score=250.60 Aligned_cols=150 Identities=29% Similarity=0.453 Sum_probs=136.8
Q ss_pred cccCHHHHHHHHhcCCCCc-cCCceEeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccCCCeecC
Q 017239 217 LLLRKEYAWHIGGALSPHE-LEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGD 295 (375)
Q Consensus 217 ~il~~~~~~~l~~~lp~~~-~~~~~lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~~~~~g~ 295 (375)
.||++++++.|+.+||... ..+|+|||++++||+|+++|+++|.++++|||+|||+.++.|||||++++|+.+..|||+
T Consensus 2 ~iL~~~~~~~l~~~lP~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~~ifGaf~~~~w~~~~~~~G~ 81 (165)
T smart00584 2 SILSEEILALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDGEVFGAYASQAWRVSDHFYGT 81 (165)
T ss_pred ccCCHHHHHHHHHhCCHhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCCCEEEEEcCCCCccCCcEECC
Confidence 5899999999999999996 567999999999999999999999998789999999999999999999999998899999
Q ss_pred CcEEEEEEcCCceeecCCCCCC-ceEEEccCCCCCcceeeeecccCcceeEecccccCccccCccCcCccccC-CCccc
Q 017239 296 MKSFLFQLYPKLAIYRPTGANS-NLQWQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSPIPHLATLVFP-RPAKY 372 (375)
Q Consensus 296 ~~~flF~l~p~~~~~~~~~~~~-~~~~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~~~~~~~~~~-~~~~~ 372 (375)
++||||++.|.+++|+|++.|+ .|+++... ++.+||.+++++||||++|.+|.+.+|.||+|+.|. ..++|
T Consensus 82 ~~sFLF~l~p~~~~y~~~~~n~~~~~~~~~~------~~~~Ggg~g~~~l~id~~l~~g~s~~~~tf~~~~L~~~~~~f 154 (165)
T smart00584 82 GESFLFQLNPKFVVYDWTGKNKYYYINGTPD------SLPIGGGGGGFGLWIDEDLNHGSSSHCKTFGNPPLSTKQEDF 154 (165)
T ss_pred CCeEEEEEcCCceEEcccccCcEEEEecCCC------eEeecCCCCceeEEEehhhCCeEeCCCCCcCCccccCCCCCE
Confidence 9999999999999999999987 77776653 467777777799999999999999999999999888 34444
No 4
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.96 E-value=4.4e-30 Score=209.34 Aligned_cols=154 Identities=22% Similarity=0.379 Sum_probs=142.0
Q ss_pred CccccCHHHHHHHHhcCCCCc--cCCceEeeecCccchhHHHHHHhhcCCCCc-----EEEEEEcCCCcEEEeeeCCCcc
Q 017239 215 SMLLLRKEYAWHIGGALSPHE--LEEWKLLYHSAMNGLSFNTFLGSISNDEGS-----AVLIIKDKEGHIYGGYASQPWE 287 (375)
Q Consensus 215 ~~~il~~~~~~~l~~~lp~~~--~~~~~lly~s~~~G~s~~~~~~~~~~~~~p-----tll~i~~~~~~ifG~~~~~~w~ 287 (375)
...||+++++..|+..||.+. ...|+||||..+||+|+++|+..|..-+.| .||+|||++|.|||||..+.++
T Consensus 33 K~~llt~e~~~~ire~lp~Ry~~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~dgd~FGaf~~d~~~ 112 (212)
T COG5142 33 KASLLTEEIVTRIRESLPDRYKYSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDKDGDLFGAFFEDRIR 112 (212)
T ss_pred hcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcCCCCEeeeechhhee
Confidence 356999999999999999996 789999999999999999999999876667 9999999999999999999999
Q ss_pred cCCCeecCCcEEEEEE--cC-------CceeecCCCCCCceEEEccCCCCCcceeeeecccCcceeEecccccCccccCc
Q 017239 288 RHGDFYGDMKSFLFQL--YP-------KLAIYRPTGANSNLQWQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSPI 358 (375)
Q Consensus 288 ~~~~~~g~~~~flF~l--~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~ 358 (375)
+..+|||+++||||++ .| ++.+|+.+|.+..-+||... -|.+|++++.++||||.+|.+|.|+||
T Consensus 113 pa~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt~~------FlafG~g~grygLl~d~sLl~g~S~p~ 186 (212)
T COG5142 113 PARHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCTPD------FLAFGCGGGRYGLLIDKSLLDGESHPV 186 (212)
T ss_pred ccCCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEchH------HhhhcCCCCcEEEEecCcccccccCCC
Confidence 9999999999999999 34 67899999999999999884 366788888999999999999999999
Q ss_pred cCcCccccCCCccccc
Q 017239 359 PHLATLVFPRPAKYIQ 374 (375)
Q Consensus 359 ~~~~~~~~~~~~~~~~ 374 (375)
+||+|.+|+++-+++|
T Consensus 187 ~tfgN~~Ls~~g~~f~ 202 (212)
T COG5142 187 ETFGNCLLSSKGHFFR 202 (212)
T ss_pred ccccccccccCCCceE
Confidence 9999999999988865
No 5
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.92 E-value=1.8e-25 Score=186.39 Aligned_cols=120 Identities=33% Similarity=0.553 Sum_probs=85.3
Q ss_pred EeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccCCC-eecCCcEEEEEEcCCceeecCCCCCCce
Q 017239 241 LLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGD-FYGDMKSFLFQLYPKLAIYRPTGANSNL 319 (375)
Q Consensus 241 lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~~~-~~g~~~~flF~l~p~~~~~~~~~~~~~~ 319 (375)
|||++++||+|+++|+++|.++ +|||+||++.++.|||||++++|+.+.. |+|+.++|||++.|.+++|+|++.+..|
T Consensus 1 Lly~s~~dG~s~~~f~~~~~~~-~~~l~iv~t~~g~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~~~~~~~~~~~~ 79 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCDGK-GPTLLIVKTSDGQIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFKIFKWTGKNQNY 79 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHTT--S-EEEEEEETTS-EEEEEESS-----SS--B--TT-EEEE-SSS-EEEE--SS----
T ss_pred CcCccchhCcCHHHHHHhcCCC-CCEEEEEECCCCcEEEEEeCCcccccCccccCCCCeEEEEeccccceeeccccccee
Confidence 7999999999999999999976 9999999999999999999999996554 9999999999999999999999999889
Q ss_pred EEEccCCCCCcceeeeecccCcceeEecccccCccccCccCcCccccC
Q 017239 320 QWQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSPIPHLATLVFP 367 (375)
Q Consensus 320 ~~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~~~~~~~~~~ 367 (375)
++++.. ++.+|+...+++||||.++.+|.+.+|.||++..+.
T Consensus 80 ~~~~~~------~~~fG~~~~~~~l~i~~~~~~~~~~~~~ty~~~~l~ 121 (139)
T PF07534_consen 80 INCNNQ------GLGFGGGSNGFDLWIDSDFNSGSSSHSETYGNPPLS 121 (139)
T ss_dssp EEEETT------EEEES-SSSS-SEEEETTS-EEEE--BTTTTB--SS
T ss_pred eeccCC------cceEeecCCceEEEEeCCCCcEEEeCCCccCCCccc
Confidence 888884 488888877899999999999999999999999888
No 6
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.90 E-value=5e-23 Score=177.19 Aligned_cols=178 Identities=17% Similarity=0.322 Sum_probs=151.1
Q ss_pred CCCC-CCCCCCccc--ccccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcC
Q 017239 1 MGNS-QPPPANPRF--VSASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQ 71 (375)
Q Consensus 1 MG~~-~s~~~~~~l--~~~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~ 71 (375)
||.. .++++.+.+ +...|.|++.|+.++++-|..-+ ++|.++.++|+.++... ..+++++|+.+|.
T Consensus 1 m~~~~~~~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~c-----P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~ 75 (193)
T KOG0044|consen 1 MGKKSNSKLQPESLEQLVQQTKFSKKEIQQWYRGFKNEC-----PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDK 75 (193)
T ss_pred CCccccccCCcHHHHHHHHhcCCCHHHHHHHHHHhcccC-----CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcc
Confidence 6766 566665544 55667999999999999999955 47999999999886552 5579999999999
Q ss_pred CCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHH
Q 017239 72 KRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFL 151 (375)
Q Consensus 72 ~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 151 (375)
++ +|.|+|+||+++++...+++.+++++++|++||.|++|+|+++|+..++.+++.+....... .....+++.++.+|
T Consensus 76 ~~-dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-~~~~~~~~~v~~if 153 (193)
T KOG0044|consen 76 NK-DGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-EDEETPEERVDKIF 153 (193)
T ss_pred cC-CCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-cccccHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999998875432222 33566788999999
Q ss_pred HhccccccCccCCCCCCCHHHHHHHHHhcchHHHHhhccc
Q 017239 152 NAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLL 191 (375)
Q Consensus 152 ~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ll 191 (375)
+++ | . ++||.||++||...+.+.|.+.+.+....
T Consensus 154 ~k~--D---~-n~Dg~lT~eef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 154 SKM--D---K-NKDGKLTLEEFIEGCKADPSILRALEQDP 187 (193)
T ss_pred HHc--C---C-CCCCcccHHHHHHHhhhCHHHHHHhhhcc
Confidence 986 3 3 38999999999999999999988876654
No 7
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-22 Score=174.47 Aligned_cols=175 Identities=21% Similarity=0.357 Sum_probs=141.1
Q ss_pred CCCCCCCCCC-ccc--ccccCC----CCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-hhHHHHHHHHhcCC
Q 017239 1 MGNSQPPPAN-PRF--VSASRS----FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQK 72 (375)
Q Consensus 1 MG~~~s~~~~-~~l--~~~~t~----fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-~~~~~~lf~~~d~~ 72 (375)
||+..|+... +++ .+..+. ||..||.+|+.+|.+++... ++|.|++++|..++... ++++++|++.++.+
T Consensus 1 Mg~~~s~~~~~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~--~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~ 78 (187)
T KOG0034|consen 1 MGNLSSTLLSDEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNN--GDGYLTKEEFLSIPELALNPLADRIIDRFDTD 78 (187)
T ss_pred CCcccccccchhhhHHHHhccCCCcccCHHHHHHHHHHHHHhcccc--ccCccCHHHHHHHHHHhcCcHHHHHHHHHhcc
Confidence 9999987532 223 345556 99999999999999999852 67999999999999665 99999999999999
Q ss_pred CCCcc-eeHHHHHHHHHhhc-CCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHH
Q 017239 73 RNDHK-LTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVF 150 (375)
Q Consensus 73 ~~~g~-I~f~eF~~~l~~~~-~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i 150 (375)
+ +|. |+|++|+.+++++. +...++|+++||++||.+++|.|+++|+..++..++..... .......++++.+
T Consensus 79 ~-~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~-----~~~e~~~~i~d~t 152 (187)
T KOG0034|consen 79 G-NGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDD-----MSDEQLEDIVDKT 152 (187)
T ss_pred C-CCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCc-----chHHHHHHHHHHH
Confidence 8 777 99999999999998 45556799999999999999999999999999987764111 0112233445555
Q ss_pred HHhccccccCccCCCCCCCHHHHHHHHHhcchHHHHhhc
Q 017239 151 LNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGG 189 (375)
Q Consensus 151 ~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ 189 (375)
+.+ .|. ++||.|+++||++.+.+.|.+.+.+..
T Consensus 153 ~~e-----~D~-d~DG~IsfeEf~~~v~~~P~~~~~m~~ 185 (187)
T KOG0034|consen 153 FEE-----ADT-DGDGKISFEEFCKVVEKQPDLLEKMTI 185 (187)
T ss_pred HHH-----hCC-CCCCcCcHHHHHHHHHcCccHHHHcCC
Confidence 554 455 489999999999999999999887653
No 8
>KOG4636 consensus Uncharacterized conserved protein with TLDc domain [Function unknown]
Probab=99.89 E-value=4.9e-22 Score=180.62 Aligned_cols=241 Identities=17% Similarity=0.186 Sum_probs=168.2
Q ss_pred CccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHH-------------HHHHHH-
Q 017239 112 GVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFE-------------DFRSWC- 177 (375)
Q Consensus 112 G~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~-------------ef~~~~- 177 (375)
+++...|+..++..+..+.+.-+....+++.....+..+.+......+ .. .-+.|-.. .|+-|.
T Consensus 143 ~~~~vsev~~fL~vC~t~a~~gra~~~~c~fi~~~~~~~t~~~~~c~d-S~-Sgnsi~rW~~~n~~~l~l~vgKfltwaL 220 (483)
T KOG4636|consen 143 ILQPVSEVHHFLKVCSTSAGAGRAIQGDCQFIKILVEEMTDGKTGCED-SQ-SGNSIIRWRRENCEKLTLAVGKFLTWAL 220 (483)
T ss_pred EeechhHHHHHHHHHHhhhcCCchhhcCCcHHHHHHHHHhcccccccc-cc-cCCceeeehhhhhHHHHHHHHHHHHHHh
Confidence 557888999999998887766554555677777777776665322222 11 11122111 111111
Q ss_pred HhcchHHHHhhcccCCCCCCCC-CCCCCc---ccCCCCCCcCccccCHHHHHHHHhcCCCCc-------------cCCce
Q 017239 178 TLIPSARKFLGGLLTPPDPGRP-GCQVPR---LLCSENVHSSMLLLRKEYAWHIGGALSPHE-------------LEEWK 240 (375)
Q Consensus 178 ~~~p~~~~~l~~ll~~~~~~~~-~~~~p~---l~~~~~~~~~~~il~~~~~~~l~~~lp~~~-------------~~~~~ 240 (375)
...|-+.+..+++-...-+... ..+-|. ......--+...|++-..+|+|+..+|+.. -.+|+
T Consensus 221 mTvpcltEcqn~~c~~~lqt~~~aednPsstavD~S~skTsed~L~plgqaW~l~~slp~~ys~eil~~pp~tsGeshwt 300 (483)
T KOG4636|consen 221 MTVPCLTECQNRVCSAVLQTKIIAEDNPSSTAVDYSSSKTSEDILSPLGQAWYLQSSLPAVYSPEILAKPPETSGESHWT 300 (483)
T ss_pred hccchhhhhhhhhhcceecceeecccCCCccccccccccccchhhhhHHHHHHHhccCCcccCchhccCCCCCCCCCcee
Confidence 1123333333332111100000 112221 011111111234666679999999999863 36999
Q ss_pred EeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccCCCeecCCcEEEEEEcCCceeecCCCCCCceE
Q 017239 241 LLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPTGANSNLQ 320 (375)
Q Consensus 241 lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~~~~~g~~~~flF~l~p~~~~~~~~~~~~~~~ 320 (375)
|||.|.+||.+.++|++++.+|+||||+|+++++++++..-++++|+.+..+||...+.+|++.|+++++.. ..|++
T Consensus 301 lLY~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkder~~viA~~qew~e~~~~fgG~~~~~f~i~P~f~~~~~---s~N~~ 377 (483)
T KOG4636|consen 301 LLYTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDERVVVIAADQEWRESGNRFGGTFTSFFEIVPNFRRIDG---SANSI 377 (483)
T ss_pred ecchhhhhccchhhHHHHhccccCCeEEEEEecCCcEEEEeechhhhhhccccccccceeEEeecceEEecC---CCceE
Confidence 999999999999999999999999999999999999999999999999888888888889999999999984 48999
Q ss_pred EEccCCCCCcceeeeecccCcceeEecccccCccccC
Q 017239 321 WQISVQRASQMALVLVDVLITLVFFSRQALIKGIRSP 357 (375)
Q Consensus 321 ~~~~~~~~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p 357 (375)
|||...+|.|+||++|+.+++..|+||+||.+=..-|
T Consensus 378 Y~nl~~rg~p~Gl~fg~tlgne~i~idedF~kItvlp 414 (483)
T KOG4636|consen 378 YCNLKLRGSPYGLSFGNTLGNEEIKIDEDFDKITVLP 414 (483)
T ss_pred EEeccccCCccceecCCCCCCceeeeccchhhccccc
Confidence 9999999999999999999999999999997655544
No 9
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.83 E-value=1.2e-19 Score=151.10 Aligned_cols=145 Identities=15% Similarity=0.325 Sum_probs=128.3
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhc---C--chhHHHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 15 SASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG---L--KGALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 15 ~~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~---~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
...+.|+++|+++++++|..+|++ ++|.|++.+|..+++ . +..++.+|+..+|. + .+.|+|.+|+.+|+.
T Consensus 9 ~~~~~~t~~qi~~lkeaF~l~D~d---~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~-~~~idf~~Fl~~ms~ 83 (160)
T COG5126 9 LTFTQLTEEQIQELKEAFQLFDRD---SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-G-NETVDFPEFLTVMSV 83 (160)
T ss_pred hhcccCCHHHHHHHHHHHHHhCcC---CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-C-CCccCHHHHHHHHHH
Confidence 445699999999999999999998 799999999998864 3 27789999999999 7 899999999999998
Q ss_pred hc-CCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCC
Q 017239 90 YE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSM 168 (375)
Q Consensus 90 ~~-~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~I 168 (375)
.. +.+.++++++||++||.|++|+|+..||+.+++. .++..++++++.++..+ ++ +++|.|
T Consensus 84 ~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~------------lge~~~deev~~ll~~~--d~----d~dG~i 145 (160)
T COG5126 84 KLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKS------------LGERLSDEEVEKLLKEY--DE----DGDGEI 145 (160)
T ss_pred HhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHh------------hcccCCHHHHHHHHHhc--CC----CCCceE
Confidence 76 7788999999999999999999999999999986 46788899999999975 33 378999
Q ss_pred CHHHHHHHHHhcch
Q 017239 169 SFEDFRSWCTLIPS 182 (375)
Q Consensus 169 s~~ef~~~~~~~p~ 182 (375)
+|++|...+...|.
T Consensus 146 ~~~eF~~~~~~~~~ 159 (160)
T COG5126 146 DYEEFKKLIKDSPT 159 (160)
T ss_pred eHHHHHHHHhccCC
Confidence 99999998877653
No 10
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.82 E-value=2.4e-19 Score=143.00 Aligned_cols=172 Identities=16% Similarity=0.273 Sum_probs=142.5
Q ss_pred CCCCCCCCCCccc--ccccCCCCHHHHHHHHHHHHHHhhhcC--------CCCCCcCHHHHHhhhcCc-hhHHHHHHHHh
Q 017239 1 MGNSQPPPANPRF--VSASRSFAQHELEDLKSLFKSLAAQSQ--------SNGRYISPSIFQAYFGLK-GALGERMFNLV 69 (375)
Q Consensus 1 MG~~~s~~~~~~l--~~~~t~fs~~ei~~l~~~F~~ld~~~~--------~~~g~i~~~ef~~~l~~~-~~~~~~lf~~~ 69 (375)
|||++...+.++| ++..|-|++++|-+|+.+|..|.++.. ++.-+++.+.+.++..+. +|+-+||..+|
T Consensus 1 MGNK~~vFT~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELkenpfk~ri~e~F 80 (189)
T KOG0038|consen 1 MGNKQTVFTEEQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKENPFKRRICEVF 80 (189)
T ss_pred CCCccceeeHHHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhcChHHHHHHHHh
Confidence 9999999999999 899999999999999999999987521 233467788888888876 89999999999
Q ss_pred cCCCCCcceeHHHHHHHHHhhcCCCH-HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHH
Q 017239 70 TQKRNDHKLTFEDLVVAKATYEKGTK-DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVD 148 (375)
Q Consensus 70 d~~~~~g~I~f~eF~~~l~~~~~~~~-~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 148 (375)
..++ .|.++|++|+.++++++...+ +-|+..||++||.|+|++|..++|...+..+-.. ..+......+++
T Consensus 81 SeDG-~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~-------eLs~eEv~~i~e 152 (189)
T KOG0038|consen 81 SEDG-RGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD-------ELSDEEVELICE 152 (189)
T ss_pred ccCC-CCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc-------cCCHHHHHHHHH
Confidence 9999 999999999999999996555 7789999999999999999999999999886442 122233334455
Q ss_pred HHHHhccccccCccCCCCCCCHHHHHHHHHhcchHHHH
Q 017239 149 VFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKF 186 (375)
Q Consensus 149 ~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~ 186 (375)
.++.+ .|. ++||+|++.+|.+++.+.|.++.-
T Consensus 153 kvieE-----AD~-DgDgkl~~~eFe~~i~raPDFlsT 184 (189)
T KOG0038|consen 153 KVIEE-----ADL-DGDGKLSFAEFEHVILRAPDFLST 184 (189)
T ss_pred HHHHH-----hcC-CCCCcccHHHHHHHHHhCcchHhh
Confidence 55554 455 499999999999999999987653
No 11
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=3.9e-17 Score=145.47 Aligned_cols=151 Identities=18% Similarity=0.202 Sum_probs=121.4
Q ss_pred ccccCHHHHHHHHhcCCCCc-cCCceEeeecCccchhHHHHHHhhcCCCCcEEEEEEcCCCcEEEeeeCCCcccC-----
Q 017239 216 MLLLRKEYAWHIGGALSPHE-LEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERH----- 289 (375)
Q Consensus 216 ~~il~~~~~~~l~~~lp~~~-~~~~~lly~s~~~G~s~~~~~~~~~~~~~ptll~i~~~~~~ifG~~~~~~w~~~----- 289 (375)
+.|++..-+.-+|++.|.+. ....-|||++-+||+|+-+||-.|.+. .||+++|++.+..|-|||.+..|...
T Consensus 342 seivsvremrdiwswvperfalcqplllfsslqhgyslarfyfqcegh-eptllliktmqkevcgaylstdwsernkfgg 420 (559)
T KOG2801|consen 342 SEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGH-EPTLLLIKTMQKEVCGAYLSTDWSERNKFGG 420 (559)
T ss_pred hhhhhHHHHhhHHHhhhHHHhhhhHHHHHHHhhcchhhhhheeeccCC-CCeeehHHHHHHHHhhHhcccchhhhcccCc
Confidence 56888888888999999997 788889999999999999999999998 99999999999999999999999963
Q ss_pred -CCeecCCcEEEEEEcCCceeecCCC-------CCCceEE---------------------------Ecc-------CCC
Q 017239 290 -GDFYGDMKSFLFQLYPKLAIYRPTG-------ANSNLQW---------------------------QIS-------VQR 327 (375)
Q Consensus 290 -~~~~g~~~~flF~l~p~~~~~~~~~-------~~~~~~~---------------------------~~~-------~~~ 327 (375)
-.+||+++||+|+++|+.+.|.|.- +-...|. +|- ...
T Consensus 421 klgffgtgecfvfrlqpevqryewvvikhpeltkppplmaaeptaplshsassdpadrlspflaarhfnlpsktesmfma 500 (559)
T KOG2801|consen 421 KLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADRLSPFLAARHFNLPSKTESMFMA 500 (559)
T ss_pred eecccccccEEEEEechhhheeeEEEEcCcccCCCCCcccCCCCCCCCccccCCchhhcChHHHHHhcCCCcchhHHHhc
Confidence 2589999999999999999888751 0111111 000 122
Q ss_pred CCcceeeeecccCcceeEecccccCccccCccCcCccccCC
Q 017239 328 ASQMALVLVDVLITLVFFSRQALIKGIRSPIPHLATLVFPR 368 (375)
Q Consensus 328 ~~~~gl~~gg~~~~~~l~i~~~~~~g~~~p~~~~~~~~~~~ 368 (375)
|+.--+.+||.+ +-++|||.|+.+|.++-|.||+|.-|-.
T Consensus 501 ggsdclivgggg-gqalyidgdlnrgrtshcdtfnnqplcs 540 (559)
T KOG2801|consen 501 GGSDCLIVGGGG-GQALYIDGDLNRGRTSHCDTFNNQPLCS 540 (559)
T ss_pred CCCceEEEcCCC-ceeEEecccccCCccccccccCCCccch
Confidence 233345555544 5789999999999999999999987754
No 12
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.62 E-value=1.3e-14 Score=122.59 Aligned_cols=138 Identities=15% Similarity=0.249 Sum_probs=116.9
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC-
Q 017239 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG- 93 (375)
Q Consensus 20 fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~- 93 (375)
++.+++.+++++|+.+|.+ ++|.|+..++..++... ......+++.+|.++ +|.|+|++|+..+......
T Consensus 2 ~~~~~~~el~~~F~~fD~d---~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg-~g~I~~~eF~~l~~~~~~~~ 77 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKD---GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDG-DGTIDFEEFLDLMEKLGEEK 77 (151)
T ss_pred CCHHHHHHHHHHHHHHCCC---CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCC-CCeEcHHHHHHHHHhhhccc
Confidence 5778999999999999998 78999999999887652 456889999999999 9999999999999866532
Q ss_pred C----HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCC
Q 017239 94 T----KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS 169 (375)
Q Consensus 94 ~----~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is 169 (375)
. ..+.++.+|++||.|++|+|+++||+.++.. .+.....+.++.+++.+ |. ++||.|+
T Consensus 78 ~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~------------lg~~~~~~e~~~mi~~~-----d~-d~dg~i~ 139 (151)
T KOG0027|consen 78 TDEEASSEELKEAFRVFDKDGDGFISASELKKVLTS------------LGEKLTDEECKEMIREV-----DV-DGDGKVN 139 (151)
T ss_pred ccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHH------------hCCcCCHHHHHHHHHhc-----CC-CCCCeEe
Confidence 2 2458999999999999999999999999987 35566678888888875 33 4899999
Q ss_pred HHHHHHHHHh
Q 017239 170 FEDFRSWCTL 179 (375)
Q Consensus 170 ~~ef~~~~~~ 179 (375)
|++|..++..
T Consensus 140 f~ef~~~m~~ 149 (151)
T KOG0027|consen 140 FEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 13
>PTZ00183 centrin; Provisional
Probab=99.62 E-value=3.2e-14 Score=120.78 Aligned_cols=142 Identities=14% Similarity=0.226 Sum_probs=119.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC-----chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-C
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL-----KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-K 92 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~-----~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~ 92 (375)
.+++.++.++.+.|..+|.+ ++|.|+.++|..++.. ....+..+|..+|.++ +|.|+|+||+.++.... .
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~---~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~-~g~i~~~eF~~~~~~~~~~ 85 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTD---GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDG-SGKIDFEEFLDIMTKKLGE 85 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC-CCcEeHHHHHHHHHHHhcC
Confidence 78999999999999999987 7999999999877652 2557899999999999 99999999999887653 4
Q ss_pred CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHH
Q 017239 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (375)
Q Consensus 93 ~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~e 172 (375)
...++.++.+|+.+|.+++|.|+.+|+..++..+ +.......+..++... +. +++|.|++++
T Consensus 86 ~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~------------~~~l~~~~~~~~~~~~--d~----~~~g~i~~~e 147 (158)
T PTZ00183 86 RDPREEILKAFRLFDDDKTGKISLKNLKRVAKEL------------GETITDEELQEMIDEA--DR----NGDGEISEEE 147 (158)
T ss_pred CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh------------CCCCCHHHHHHHHHHh--CC----CCCCcCcHHH
Confidence 4557789999999999999999999999988752 3445667788888864 32 2789999999
Q ss_pred HHHHHHhcch
Q 017239 173 FRSWCTLIPS 182 (375)
Q Consensus 173 f~~~~~~~p~ 182 (375)
|...+...|.
T Consensus 148 f~~~~~~~~~ 157 (158)
T PTZ00183 148 FYRIMKKTNL 157 (158)
T ss_pred HHHHHhcccC
Confidence 9999988774
No 14
>PTZ00184 calmodulin; Provisional
Probab=99.58 E-value=7.5e-14 Score=117.07 Aligned_cols=138 Identities=14% Similarity=0.283 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC-----chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-C
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL-----KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-K 92 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~-----~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~ 92 (375)
.+++++++++.+.|..+|.+ ++|.|+.++|..++.. ....+.++|+.+|.++ +|.|+|++|+.++.... .
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~---~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~i~~~ef~~~l~~~~~~ 79 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKD---GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG-NGTIDFPEFLTLMARKMKD 79 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCC---CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCC-CCcCcHHHHHHHHHHhccC
Confidence 68899999999999999987 7899999999977642 2557899999999999 99999999999988654 4
Q ss_pred CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHH
Q 017239 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (375)
Q Consensus 93 ~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~e 172 (375)
...++.++.+|+.||.+++|.|+.+|+..++..+ +.....+.++.++..+ +. +++|.|++++
T Consensus 80 ~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~--d~----~~~g~i~~~e 141 (149)
T PTZ00184 80 TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNL------------GEKLTDEEVDEMIREA--DV----DGDGQINYEE 141 (149)
T ss_pred CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH------------CCCCCHHHHHHHHHhc--CC----CCCCcCcHHH
Confidence 4567889999999999999999999999988762 2344567788888764 32 3789999999
Q ss_pred HHHHHH
Q 017239 173 FRSWCT 178 (375)
Q Consensus 173 f~~~~~ 178 (375)
|...+.
T Consensus 142 f~~~~~ 147 (149)
T PTZ00184 142 FVKMMM 147 (149)
T ss_pred HHHHHh
Confidence 998774
No 15
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=8.1e-12 Score=102.06 Aligned_cols=142 Identities=15% Similarity=0.209 Sum_probs=119.4
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC-----chhHHHHHHHHhcCCCCCcceeHHHHHHHHHh-h
Q 017239 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL-----KGALGERMFNLVTQKRNDHKLTFEDLVVAKAT-Y 90 (375)
Q Consensus 17 ~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~-----~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~-~ 90 (375)
...+++++.+.++.+|+.++.+ .+|+|+.++|...+.. ....+.+|..-+|+++ .|.|+|++|+..++. +
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~---~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~-~g~i~fe~f~~~mt~k~ 99 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPD---MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEG-SGKITFEDFRRVMTVKL 99 (172)
T ss_pred CccccHHHHhhHHHHHHhhccC---CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhcc-CceechHHHHHHHHHHH
Confidence 4478899999999999999987 7899999999654433 2556788999999999 999999999999875 5
Q ss_pred cCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCH
Q 017239 91 EKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSF 170 (375)
Q Consensus 91 ~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~ 170 (375)
...++.+.++.+|+++|.|.+|.|+..+|+.+... .++..+++.+.+++.+. |. +++|.|+-
T Consensus 100 ~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvake------------LgenltD~El~eMIeEA-----d~-d~dgevne 161 (172)
T KOG0028|consen 100 GERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKE------------LGENLTDEELMEMIEEA-----DR-DGDGEVNE 161 (172)
T ss_pred hccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHH------------hCccccHHHHHHHHHHh-----cc-cccccccH
Confidence 56668889999999999999999999999999987 46777788888888775 33 38999999
Q ss_pred HHHHHHHHhc
Q 017239 171 EDFRSWCTLI 180 (375)
Q Consensus 171 ~ef~~~~~~~ 180 (375)
++|...+...
T Consensus 162 eEF~~imk~t 171 (172)
T KOG0028|consen 162 EEFIRIMKKT 171 (172)
T ss_pred HHHHHHHhcC
Confidence 9999988754
No 16
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.36 E-value=2.2e-11 Score=98.79 Aligned_cols=138 Identities=12% Similarity=0.236 Sum_probs=112.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-hhHHHHHHHHhcCCCCCcceeHHHHHHHHH-hhcCCCHH
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQKRNDHKLTFEDLVVAKA-TYEKGTKD 96 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~-~~~~~~~~ 96 (375)
.|++.+|++++++|..+|.+ ++|.|++++++..+... .+..+.-.+.+-... .|-|+|.-|+.++. .++..+++
T Consensus 25 mf~q~QIqEfKEAF~~mDqn---rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea-~gPINft~FLTmfGekL~gtdpe 100 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQN---RDGFIDKEDLRDMLASLGKIASDEELDAMMKEA-PGPINFTVFLTMFGEKLNGTDPE 100 (171)
T ss_pred HhhHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC-CCCeeHHHHHHHHHHHhcCCCHH
Confidence 47899999999999999987 89999999999887653 222223333333334 88999999999985 56677889
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHH
Q 017239 97 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 176 (375)
Q Consensus 97 ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~ 176 (375)
+-+..||+.||.+++|.|..+.|++++.+ .++...+++|+.+++..-. +..|.+.|..|...
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt------------~gDr~~~eEV~~m~r~~p~------d~~G~~dy~~~~~~ 162 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTT------------MGDRFTDEEVDEMYREAPI------DKKGNFDYKAFTYI 162 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHH------------hcccCCHHHHHHHHHhCCc------ccCCceeHHHHHHH
Confidence 99999999999999999999999999987 4678889999999998522 24689999999988
Q ss_pred HH
Q 017239 177 CT 178 (375)
Q Consensus 177 ~~ 178 (375)
+.
T Consensus 163 it 164 (171)
T KOG0031|consen 163 IT 164 (171)
T ss_pred HH
Confidence 86
No 17
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.21 E-value=2.4e-10 Score=106.71 Aligned_cols=136 Identities=15% Similarity=0.257 Sum_probs=116.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhc---Cc---hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcC
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG---LK---GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEK 92 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~---~~---~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~ 92 (375)
..+++.-.++...|+.+|.+ ++|.++..++.+.+. .+ ...+..+|..+|.|+ +|.+||+||..++.
T Consensus 7 ~~~~er~~r~~~lf~~lD~~---~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~-dg~vDy~eF~~Y~~---- 78 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSK---NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANR-DGRVDYSEFKRYLD---- 78 (463)
T ss_pred CCcHHHHHHHHHHHHHhccC---CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCc-CCcccHHHHHHHHH----
Confidence 45666777899999999987 799999999985543 33 446899999999999 99999999999987
Q ss_pred CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHH
Q 017239 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFED 172 (375)
Q Consensus 93 ~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~e 172 (375)
..|.++...|..+|.+.||.|..+|+.+.++. .+.+..++.++.++..+ |. ++++.|+++|
T Consensus 79 -~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~------------~gi~l~de~~~k~~e~~-----d~-~g~~~I~~~e 139 (463)
T KOG0036|consen 79 -NKELELYRIFQSIDLEHDGKIDPNEIWRYLKD------------LGIQLSDEKAAKFFEHM-----DK-DGKATIDLEE 139 (463)
T ss_pred -HhHHHHHHHHhhhccccCCccCHHHHHHHHHH------------hCCccCHHHHHHHHHHh-----cc-CCCeeeccHH
Confidence 46888999999999999999999999999987 35567788899998876 33 3788999999
Q ss_pred HHHHHHhcc
Q 017239 173 FRSWCTLIP 181 (375)
Q Consensus 173 f~~~~~~~p 181 (375)
|.+++..+|
T Consensus 140 ~rd~~ll~p 148 (463)
T KOG0036|consen 140 WRDHLLLYP 148 (463)
T ss_pred HHhhhhcCC
Confidence 999999998
No 18
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.15 E-value=1.3e-09 Score=94.07 Aligned_cols=139 Identities=12% Similarity=0.201 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHH
Q 017239 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDE 97 (375)
Q Consensus 24 ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~e 97 (375)
.-..+...|...|++ ..|.|+.+|++..+... ..-++.|...||.+. +|+|+|+||...... -.
T Consensus 55 ~~~~~~~~f~~vD~d---~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~-~G~i~f~EF~~Lw~~------i~ 124 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRD---RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDN-SGTIGFKEFKALWKY------IN 124 (221)
T ss_pred ccHHHHHHHHhhCcc---ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCC-CCccCHHHHHHHHHH------HH
Confidence 345789999999998 78999999999998742 445788889999999 999999999987764 34
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
.++.+|+-||.|++|.|+..||+.++.. .+...+.+..+.|+++- ++. ..|.|.|++|+..|
T Consensus 125 ~Wr~vF~~~D~D~SG~I~~sEL~~Al~~------------~Gy~Lspq~~~~lv~ky--d~~----~~g~i~FD~FI~cc 186 (221)
T KOG0037|consen 125 QWRNVFRTYDRDRSGTIDSSELRQALTQ------------LGYRLSPQFYNLLVRKY--DRF----GGGRIDFDDFIQCC 186 (221)
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHH------------cCcCCCHHHHHHHHHHh--ccc----cCCceeHHHHHHHH
Confidence 6899999999999999999999999987 46778888898888863 322 47899999999999
Q ss_pred HhcchHHHHhhcc
Q 017239 178 TLIPSARKFLGGL 190 (375)
Q Consensus 178 ~~~p~~~~~l~~l 190 (375)
..-+.+.+.+..+
T Consensus 187 v~L~~lt~~Fr~~ 199 (221)
T KOG0037|consen 187 VVLQRLTEAFRRR 199 (221)
T ss_pred HHHHHHHHHHHHh
Confidence 8766555544443
No 19
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.14 E-value=6.6e-10 Score=88.79 Aligned_cols=137 Identities=18% Similarity=0.242 Sum_probs=108.6
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCC--CCCcceeHHHHHHHHHhhc
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQK--RNDHKLTFEDLVVAKATYE 91 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~--~~~g~I~f~eF~~~l~~~~ 91 (375)
.+++++..+++++|..+|.. ++|+|+......+++.. +..+.+.....+.+ + -.+|+|++|+-++..+.
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~---gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~-~~rl~FE~fLpm~q~va 79 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRT---GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMN-VKRLDFEEFLPMYQQVA 79 (152)
T ss_pred ccCcchHHHHHHHHHHHhcc---CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhh-hhhhhHHHHHHHHHHHH
Confidence 57788889999999999987 89999999888776542 34455555555554 2 47899999999998876
Q ss_pred CC---CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCC
Q 017239 92 KG---TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSM 168 (375)
Q Consensus 92 ~~---~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~I 168 (375)
+. ..-+..-.-++.||.+++|.|...||+.++.++ |+...+++++.++... . |.+|.|
T Consensus 80 knk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttl------------Gekl~eeEVe~Llag~----e---D~nG~i 140 (152)
T KOG0030|consen 80 KNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTL------------GEKLTEEEVEELLAGQ----E---DSNGCI 140 (152)
T ss_pred hccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHH------------HhhccHHHHHHHHccc----c---ccCCcC
Confidence 33 234555568999999999999999999999984 5667888999998863 2 367999
Q ss_pred CHHHHHHHHH
Q 017239 169 SFEDFRSWCT 178 (375)
Q Consensus 169 s~~ef~~~~~ 178 (375)
+|+.|.+.+.
T Consensus 141 ~YE~fVk~i~ 150 (152)
T KOG0030|consen 141 NYEAFVKHIM 150 (152)
T ss_pred cHHHHHHHHh
Confidence 9999988765
No 20
>PLN02964 phosphatidylserine decarboxylase
Probab=99.07 E-value=7.6e-10 Score=111.98 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=94.2
Q ss_pred CCCCccc--cccc--CCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhc--Cc----hhHHHHHHHHhcCCCCCc
Q 017239 7 PPANPRF--VSAS--RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG--LK----GALGERMFNLVTQKRNDH 76 (375)
Q Consensus 7 ~~~~~~l--~~~~--t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~--~~----~~~~~~lf~~~d~~~~~g 76 (375)
++++.+| +... +.|+.+|+++++++|+.+|++ ++|.+ ...+...++ .+ ..+++++|+.+|.++ +|
T Consensus 120 ~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~d---gdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D~Dg-dG 194 (644)
T PLN02964 120 RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPS---SSNKV-VGSIFVSCSIEDPVETERSFARRILAIVDYDE-DG 194 (644)
T ss_pred CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCC---CCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCC-CC
Confidence 3445555 2333 689999999999999999997 78887 555555555 22 235899999999999 99
Q ss_pred ceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 77 KLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 77 ~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.|+|+||+.++..+.....++.++.+|+.||.|++|.|+.+||.+++..
T Consensus 195 ~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 195 QLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred eEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 9999999999998876677889999999999999999999999999877
No 21
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.83 E-value=3.7e-08 Score=93.64 Aligned_cols=157 Identities=17% Similarity=0.258 Sum_probs=120.6
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--hhHHHHHHHHh----cCCCCCcceeHHHHHHHHH
Q 017239 15 SASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLV----TQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 15 ~~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--~~~~~~lf~~~----d~~~~~g~I~f~eF~~~l~ 88 (375)
+....||-+.-..++-.|..||++ .+|.|+++++..+-... ..+++|||... -... +|+|||++|+.++-
T Consensus 267 q~~~~FS~e~f~viy~kFweLD~D---hd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~-eGrmdykdFv~Fil 342 (493)
T KOG2562|consen 267 QVTRYFSYEHFYVIYCKFWELDTD---HDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKV-EGRMDYKDFVDFIL 342 (493)
T ss_pred hhhhheeHHHHHHHHHHHhhhccc---cccccCHHHHHHHhccchhhHHHHHHHhhccccceeee-cCcccHHHHHHHHH
Confidence 345578888888999999999998 79999999999876553 78999999933 2333 89999999999999
Q ss_pred hhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCC
Q 017239 89 TYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSM 168 (375)
Q Consensus 89 ~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~I 168 (375)
.+.......-++..|+.+|.+++|.|+..|+.-+....++.+-.. .......++...++++-+. .. +.+.|
T Consensus 343 A~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~---~~e~l~fed~l~qi~DMvk--P~----~~~kI 413 (493)
T KOG2562|consen 343 AEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECM---GQEALPFEDALCQIRDMVK--PE----DENKI 413 (493)
T ss_pred HhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhc---CCCcccHHHHHHHHHHHhC--cc----CCCce
Confidence 888777778899999999999999999999999998877654321 1223344667777777542 12 46899
Q ss_pred CHHHHHHHHHhcchHHH
Q 017239 169 SFEDFRSWCTLIPSARK 185 (375)
Q Consensus 169 s~~ef~~~~~~~p~~~~ 185 (375)
|+++|.. ++..-.+..
T Consensus 414 tLqDlk~-skl~~~v~n 429 (493)
T KOG2562|consen 414 TLQDLKG-SKLAGTVFN 429 (493)
T ss_pred eHHHHhh-ccccchhhh
Confidence 9999988 444333333
No 22
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.69 E-value=1.3e-07 Score=79.09 Aligned_cols=99 Identities=14% Similarity=0.199 Sum_probs=83.2
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcC
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEK 92 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~ 92 (375)
..+..++.++...+.. +++.|+..+|..+++.. ..-..+.|+.||.++ +|+|+..++..++..+..
T Consensus 52 ~~s~~ei~~l~~~~d~-------~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~-dG~Is~~eL~~vl~~lge 123 (160)
T COG5126 52 NPSEAEINKLFEEIDA-------GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDH-DGYISIGELRRVLKSLGE 123 (160)
T ss_pred CCcHHHHHHHHHhccC-------CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCC-CceecHHHHHHHHHhhcc
Confidence 4456666666544443 35899999999998763 456789999999999 999999999999999988
Q ss_pred CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 93 GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 93 ~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
...++.+..+++.+|.|++|.|+++++.+++..
T Consensus 124 ~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 124 RLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 888999999999999999999999999997753
No 23
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.65 E-value=5.5e-08 Score=88.34 Aligned_cols=151 Identities=15% Similarity=0.179 Sum_probs=113.1
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcC-CCHHH
Q 017239 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEK-GTKDE 97 (375)
Q Consensus 20 fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~-~~~~e 97 (375)
+...-+..-...+-...+. .+++.|...+|...++.+ ....+.+|..||.++ +|.+||.|.+.+++.+|. ....+
T Consensus 220 L~~~gl~k~ld~y~~var~--~kg~~igi~efa~~l~vpvsd~l~~~f~LFde~~-tg~~D~re~v~~lavlc~p~~t~~ 296 (412)
T KOG4666|consen 220 LPLVGLIKKLDGYVYVARE--AKGPDIGIVEFAVNLRVPVSDKLAPTFMLFDEGT-TGNGDYRETVKTLAVLCGPPVTPV 296 (412)
T ss_pred CChHHHHHHHhhHHHHHHh--ccCCCcceeEeeeeeecchhhhhhhhhheecCCC-CCcccHHHHhhhheeeeCCCCcHH
Confidence 3334443333444333332 246788889998888887 667889999999999 999999999999999984 45589
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
.++.+|++|+.+.||++...+|.-+++..++. ..-.+-.++.+. ++. .+++|++++|.++.
T Consensus 297 iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv-------------~~l~v~~lf~~i--~q~----d~~ki~~~~f~~fa 357 (412)
T KOG4666|consen 297 IIQYAFKRFSVAEDGISGEHILSLILQVVLGV-------------EVLRVPVLFPSI--EQK----DDPKIYASNFRKFA 357 (412)
T ss_pred HHHHHHHhcccccccccchHHHHHHHHHhcCc-------------ceeeccccchhh--hcc----cCcceeHHHHHHHH
Confidence 99999999999999999999998888876543 111233445543 212 56899999999999
Q ss_pred HhcchHHHHhhcccC
Q 017239 178 TLIPSARKFLGGLLT 192 (375)
Q Consensus 178 ~~~p~~~~~l~~ll~ 192 (375)
..+|.++.....++-
T Consensus 358 ~~~p~~a~~~~~yld 372 (412)
T KOG4666|consen 358 ATEPNLALSELGYLD 372 (412)
T ss_pred HhCchhhhhhhcccc
Confidence 999998876666654
No 24
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.64 E-value=3.5e-08 Score=70.79 Aligned_cols=66 Identities=12% Similarity=0.310 Sum_probs=51.5
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
+++.+|+.||.|++|+|+.+||..++..+... .....++..++.+++.+ |. +++|.|+++||..++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----D~-d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRD--------MSDEESDEMIDQIFREF-----DT-DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--------STHHHHHHHHHHHHHHH-----TT-TSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccc--------ccHHHHHHHHHHHHHHh-----CC-CCcCCCcHHHHhccC
Confidence 57899999999999999999999999885432 11234556777778764 33 389999999999875
No 25
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.55 E-value=4.9e-07 Score=76.25 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------h----hHHHHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------G----ALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~----~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
..+++|+..+ +..++.+ ++|.|+.++|..++... . ..+...|+.+|.++ +|.|+..|+..+|.
T Consensus 40 ~~t~~el~~~---~~~~D~d---g~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~-~G~Is~~el~~~l~ 112 (151)
T KOG0027|consen 40 NPTEEELRDL---IKEIDLD---GDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDG-DGFISASELKKVLT 112 (151)
T ss_pred CCCHHHHHHH---HHHhCCC---CCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCC-CCcCcHHHHHHHHH
Confidence 3455555544 5666665 78999999999987642 1 16789999999999 99999999999999
Q ss_pred hhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHH
Q 017239 89 TYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 89 ~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
.+......+.+..+++..|.|+||.|+.+|+.+++.
T Consensus 113 ~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 113 SLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 998777788999999999999999999999988875
No 26
>PTZ00183 centrin; Provisional
Probab=98.54 E-value=5.5e-07 Score=76.08 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=78.7
Q ss_pred HHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC------chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHH
Q 017239 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEE 100 (375)
Q Consensus 27 ~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~ 100 (375)
.+...|..++.+ ++|.|+.++|..++.. .......+|+.+|.++ +|.|+.+||..++..+...-..+.++
T Consensus 54 ~~~~l~~~~d~~---~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~e~~~~l~~~~~~l~~~~~~ 129 (158)
T PTZ00183 54 EIKQMIADVDKD---GSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDK-TGKISLKNLKRVAKELGETITDEELQ 129 (158)
T ss_pred HHHHHHHHhCCC---CCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHhCCCCCHHHHH
Confidence 355666667665 7899999999876543 1345789999999999 99999999999998776556678899
Q ss_pred HHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 101 FIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 101 ~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.+|..+|.+++|.|+.+|+..++..
T Consensus 130 ~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 130 EMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 9999999999999999999988754
No 27
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.50 E-value=1e-06 Score=80.54 Aligned_cols=132 Identities=15% Similarity=0.225 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCH
Q 017239 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTK 95 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~ 95 (375)
...+.+=.++|+.-|.+ ++|.++++||..++-.. ...+..-..-+|+|+ ||.|+++||+.-|-.......
T Consensus 159 ~km~~rDe~rFk~AD~d---~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~-DG~I~~eEfigd~~~~~~~~~ 234 (325)
T KOG4223|consen 159 KKMIARDEERFKAADQD---GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNG-DGKISLEEFIGDLYSHEGNEE 234 (325)
T ss_pred HHHHHHHHHHHhhcccC---CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCC-CCceeHHHHHhHHhhccCCCC
Confidence 34555667788888877 89999999999987542 345667778889999 999999999998765442211
Q ss_pred -----HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCH
Q 017239 96 -----DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSF 170 (375)
Q Consensus 96 -----~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~ 170 (375)
...-...+..+|.|+||+++.+|++.-|.- .+....+.++.-++.+. |. ++||++|+
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P------------~~~d~A~~EA~hL~~ea-----D~-dkD~kLs~ 296 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILP------------SEQDHAKAEARHLLHEA-----DE-DKDGKLSK 296 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCccCHHHHhcccCC------------CCccHHHHHHHHHhhhh-----cc-CccccccH
Confidence 112235788899999999999999965532 23344566777777764 33 48999999
Q ss_pred HHHHH
Q 017239 171 EDFRS 175 (375)
Q Consensus 171 ~ef~~ 175 (375)
+|...
T Consensus 297 eEIl~ 301 (325)
T KOG4223|consen 297 EEILE 301 (325)
T ss_pred HHHhh
Confidence 99743
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.47 E-value=3.4e-07 Score=65.60 Aligned_cols=60 Identities=18% Similarity=0.319 Sum_probs=40.0
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhcCC----CHHHHHHHHHHhhcCCCCCccCHHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKG----TKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~----~~~ekl~~~F~l~D~d~dG~Is~~El~~~l 123 (375)
.++|+.+|.++ +|.|+.+||..++..+... ..++.+..+|+.+|.|++|.|+.+|+..++
T Consensus 3 ~~~F~~~D~d~-~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 3 KEAFKKFDKDG-DGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHSTTS-SSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHcCCc-cCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 46677777777 7777777777777665522 224555666777777777777777776653
No 29
>PTZ00184 calmodulin; Provisional
Probab=98.44 E-value=1.9e-06 Score=71.79 Aligned_cols=94 Identities=14% Similarity=0.213 Sum_probs=77.5
Q ss_pred HHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHH
Q 017239 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEE 100 (375)
Q Consensus 27 ~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~ 100 (375)
.+...|..++.+ ++|.|+.++|..++... ...+..+|+.+|.++ +|.|+.++|..++..+......+.++
T Consensus 48 ~~~~~~~~~d~~---~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~-~g~i~~~e~~~~l~~~~~~~~~~~~~ 123 (149)
T PTZ00184 48 ELQDMINEVDAD---GNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDG-NGFISAAELRHVMTNLGEKLTDEEVD 123 (149)
T ss_pred HHHHHHHhcCcC---CCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCC-CCeEeHHHHHHHHHHHCCCCCHHHHH
Confidence 455666667665 68999999999876531 345789999999999 99999999999998776555677888
Q ss_pred HHHHhhcCCCCCccCHHHHHHHHH
Q 017239 101 FIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 101 ~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
.+|+.+|.+++|.|+.+|+..++.
T Consensus 124 ~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 124 EMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHhcCCCCCCcCcHHHHHHHHh
Confidence 899999999999999999988763
No 30
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.42 E-value=1.2e-06 Score=75.89 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc--C------
Q 017239 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE--K------ 92 (375)
Q Consensus 26 ~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~--~------ 92 (375)
.....+|...|.+ ++|.|+.+||...+... ..-..-.|+.+|.++ +|.|+.+|++.++..+. .
T Consensus 64 ~y~~~vF~~fD~~---~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dg-dG~It~~Eml~iv~~i~~m~~~~~~~ 139 (193)
T KOG0044|consen 64 KYAELVFRTFDKN---KDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDG-DGYITKEEMLKIVQAIYQMTGSKALP 139 (193)
T ss_pred HHHHHHHHHhccc---CCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCC-CceEcHHHHHHHHHHHHHHcccccCC
Confidence 3455678888876 79999999999887652 444566799999999 99999999999876542 1
Q ss_pred ---CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 93 ---GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 93 ---~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.++++.+..+|+.+|.|+||.||.+|+.....+
T Consensus 140 ~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 140 EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred cccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 235788999999999999999999999987765
No 31
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.34 E-value=1.4e-06 Score=67.55 Aligned_cols=68 Identities=13% Similarity=0.227 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC---chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
.+|++++.++.++|+.+|.+ ++|.|+.+++..++.. +...+++++..+|.++ +|.|+|+||+.++...
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d---~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~-~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKN---QDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDN-DGELDKDEFALAMHLI 73 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence 35777888888888888766 6777888777776533 3455667777777776 7777777777766543
No 32
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.30 E-value=1e-05 Score=70.18 Aligned_cols=141 Identities=12% Similarity=0.162 Sum_probs=106.6
Q ss_pred CCCccccc-----ccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCCCCcceeHHH
Q 017239 8 PANPRFVS-----ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFED 82 (375)
Q Consensus 8 ~~~~~l~~-----~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~~~g~I~f~e 82 (375)
+..+||.+ .-.+|+.+-+.-|...|++ + .+|+|..+||..++..-.. .+.+|+.+|+|+ +|+|+..|
T Consensus 74 i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~---~---~~G~i~f~EF~~Lw~~i~~-Wr~vF~~~D~D~-SG~I~~sE 145 (221)
T KOG0037|consen 74 ILAKELQQALSNGTWSPFSIETCRLMISMFDR---D---NSGTIGFKEFKALWKYINQ-WRNVFRTYDRDR-SGTIDSSE 145 (221)
T ss_pred ccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcC---C---CCCccCHHHHHHHHHHHHH-HHHHHHhcccCC-CCcccHHH
Confidence 45566622 3346888888777777765 2 6799999999998875433 679999999999 99999999
Q ss_pred HHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCcc
Q 017239 83 LVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGER 162 (375)
Q Consensus 83 F~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~ 162 (375)
+-.++..+.-.-..+....+++.||..++|.|..+++.+++..+-.+ . +.|++. |.. .
T Consensus 146 L~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~l-----------------t-~~Fr~~--D~~--q 203 (221)
T KOG0037|consen 146 LRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRL-----------------T-EAFRRR--DTA--Q 203 (221)
T ss_pred HHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHH-----------------H-HHHHHh--ccc--c
Confidence 99999999877778899999999998889999999999887654322 2 234442 222 1
Q ss_pred CCCCCCCHHHHHHHHH
Q 017239 163 SSNKSMSFEDFRSWCT 178 (375)
Q Consensus 163 ~~dg~Is~~ef~~~~~ 178 (375)
++.-.|+|++|..+..
T Consensus 204 ~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 204 QGSITISYDDFLQMTM 219 (221)
T ss_pred ceeEEEeHHHHHHHhh
Confidence 2445689999987654
No 33
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.25 E-value=3.6e-06 Score=64.00 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhh-hcCCCCCCcCHHHHHhhhcC--c----h-hHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 22 QHELEDLKSLFKSLAA-QSQSNGRYISPSIFQAYFGL--K----G-ALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~-~~~~~~g~i~~~ef~~~l~~--~----~-~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
+.-+..|.++|+.+|+ + ++|.|+..+|+.++.. + . ..++.+++.+|.|+ +|.|+|+||+..+..+
T Consensus 4 E~ai~~l~~~F~~fd~~~---~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~-DG~I~F~EF~~l~~~l 76 (89)
T cd05022 4 EKAIETLVSNFHKASVKG---GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQ-DSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHHHHhCCC---CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCC-CCCCcHHHHHHHHHHH
Confidence 3456778888888887 5 6788888888877644 1 3 45778888888887 8888888887776644
No 34
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.21 E-value=9.4e-06 Score=61.70 Aligned_cols=70 Identities=14% Similarity=0.266 Sum_probs=54.2
Q ss_pred HHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHH
Q 017239 97 EIEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (375)
Q Consensus 97 ekl~~~F~l~D-~d~dG-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~ 174 (375)
..++.+|+.|| .|++| .|+.+||+.++..-+... .+....++.++.+++.+ + . +++|.|+|++|.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~-------lg~~~~~~~v~~~i~~~--D---~-n~dG~v~f~eF~ 74 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHF-------LEEIKEQEVVDKVMETL--D---S-DGDGECDFQEFM 74 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHH-------hcCCCCHHHHHHHHHHh--C---C-CCCCcCcHHHHH
Confidence 35788999998 79999 599999999998743322 23445667799988875 3 3 388999999999
Q ss_pred HHHHh
Q 017239 175 SWCTL 179 (375)
Q Consensus 175 ~~~~~ 179 (375)
.++..
T Consensus 75 ~li~~ 79 (88)
T cd05027 75 AFVAM 79 (88)
T ss_pred HHHHH
Confidence 88864
No 35
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.16 E-value=1.3e-05 Score=61.75 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=52.7
Q ss_pred HHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHH
Q 017239 97 EIEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (375)
Q Consensus 97 ekl~~~F~l~D-~d~dG-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~ 174 (375)
..+..+|..|| .|++| .|+.+||+.++....... ......+..++.+++.+ |. +++|.|+|+||.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~-------~~~~~~~~~v~~i~~el-----D~-n~dG~Idf~EF~ 76 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDF-------LSSQKDPMLVDKIMNDL-----DS-NKDNEVDFNEFV 76 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHh-------cccccCHHHHHHHHHHh-----CC-CCCCCCCHHHHH
Confidence 35677899999 78998 599999999997744321 11233556888888875 33 388999999999
Q ss_pred HHHHh
Q 017239 175 SWCTL 179 (375)
Q Consensus 175 ~~~~~ 179 (375)
.++..
T Consensus 77 ~l~~~ 81 (93)
T cd05026 77 VLVAA 81 (93)
T ss_pred HHHHH
Confidence 99875
No 36
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.12 E-value=9.4e-06 Score=62.43 Aligned_cols=65 Identities=17% Similarity=0.364 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHh-hhcCCCCC-CcCHHHHHhhhcC----------chhHHHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 22 QHELEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld-~~~~~~~g-~i~~~ef~~~l~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
++-+..+.++|..+| .+ ++| .|+.+||+.++.. ....++.+++.+|.++ +|.|+|+||+..+..
T Consensus 6 e~a~~~~~~~F~~~dd~d---gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~-dG~Idf~EF~~l~~~ 81 (93)
T cd05026 6 EGAMDTLIRIFHNYSGKE---GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNK-DNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHHHccC---CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHH
Confidence 345677888888887 33 566 4888888877732 1235778888888888 888888888887765
Q ss_pred h
Q 017239 90 Y 90 (375)
Q Consensus 90 ~ 90 (375)
+
T Consensus 82 l 82 (93)
T cd05026 82 L 82 (93)
T ss_pred H
Confidence 4
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.11 E-value=1.2e-05 Score=61.06 Aligned_cols=65 Identities=11% Similarity=0.267 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhh--hcCCCCCCcCHHHHHhhhcC--c--------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 22 QHELEDLKSLFKSLAA--QSQSNGRYISPSIFQAYFGL--K--------GALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~--~~~~~~g~i~~~ef~~~l~~--~--------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
+++++.++++|..+|. + ++|.|+.++|..++.. + ...+++++..+|.++ +|.|+|++|+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~---~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~-~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG---DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNK-DGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccC---CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCC-CCcCcHHHHHHHHHH
Confidence 5678888888999888 5 6788999988887642 1 456788888888888 888888888887764
Q ss_pred h
Q 017239 90 Y 90 (375)
Q Consensus 90 ~ 90 (375)
.
T Consensus 80 ~ 80 (88)
T cd00213 80 L 80 (88)
T ss_pred H
Confidence 4
No 38
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.08 E-value=1.5e-05 Score=69.04 Aligned_cols=103 Identities=12% Similarity=0.143 Sum_probs=78.1
Q ss_pred CCCHHHHHHHH---------HHHHHHhhhcCCCCCC-cCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHH
Q 017239 19 SFAQHELEDLK---------SLFKSLAAQSQSNGRY-ISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFED 82 (375)
Q Consensus 19 ~fs~~ei~~l~---------~~F~~ld~~~~~~~g~-i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~e 82 (375)
.++.+|...+- ++++..+.. ++|. |+.++|...+..- ..-++-.|+.+|.++ +|.|+.+|
T Consensus 50 ~lt~eef~~i~~~~~Np~~~rI~~~f~~~---~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~-~G~I~ree 125 (187)
T KOG0034|consen 50 YLTKEEFLSIPELALNPLADRIIDRFDTD---GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDG-DGFISREE 125 (187)
T ss_pred ccCHHHHHHHHHHhcCcHHHHHHHHHhcc---CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCC-CCcCcHHH
Confidence 45566555443 334444443 4455 9999999888762 224677999999999 99999999
Q ss_pred HHHHHHhhcC-CCH------HHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 83 LVVAKATYEK-GTK------DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 83 F~~~l~~~~~-~~~------~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
+..++..+.. +.. ++.+..+|..+|.|+||.|+.+|+.+++..
T Consensus 126 l~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 126 LKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 9999987763 222 456788999999999999999999999865
No 39
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.07 E-value=2.7e-05 Score=59.73 Aligned_cols=71 Identities=14% Similarity=0.244 Sum_probs=54.0
Q ss_pred HHHHHHHHHhhc-CCCCCc-cCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHH
Q 017239 96 DEIEEFIYQLLD-VNDDGV-LGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (375)
Q Consensus 96 ~ekl~~~F~l~D-~d~dG~-Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef 173 (375)
.+.++.+|++|| .|++|+ |+.+||+.++...++.. .+...++..++.+++.+ +. +++|.|+|++|
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~-------~~~~~s~~~v~~i~~~~--D~----d~~G~I~f~eF 74 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF-------LDAQKDADAVDKIMKEL--DE----NGDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH-------ccCCCCHHHHHHHHHHH--CC----CCCCcCcHHHH
Confidence 466889999997 999995 99999999997633321 11234566788888875 32 37899999999
Q ss_pred HHHHHh
Q 017239 174 RSWCTL 179 (375)
Q Consensus 174 ~~~~~~ 179 (375)
..++..
T Consensus 75 ~~l~~~ 80 (92)
T cd05025 75 VVLVAA 80 (92)
T ss_pred HHHHHH
Confidence 998875
No 40
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.06 E-value=1.4e-05 Score=61.38 Aligned_cols=63 Identities=14% Similarity=0.317 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHh-hhcCCCCC-CcCHHHHHhhhcC----------chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 24 ELEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 24 ei~~l~~~F~~ld-~~~~~~~g-~i~~~ef~~~l~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
-++.+.++|+.+| .+ ++| .|+.++|+.++.. ....++++++.+|.++ +|.|+|++|+.++..+
T Consensus 7 ~~~~l~~~F~~fDd~d---g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~-~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKE---GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENG-DGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhccc---CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCC-CCcCcHHHHHHHHHHH
Confidence 3456777777775 55 567 4777777766642 1344667777777776 7777777777666543
No 41
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.06 E-value=1.8e-05 Score=54.85 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=50.3
Q ss_pred HHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHH
Q 017239 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l 123 (375)
+.++|+.+|.++ +|.|++++|..++..+......+.++.+|+.+|.+++|.|+.+|+..++
T Consensus 2 ~~~~f~~~d~~~-~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDG-DGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCC-CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 356788888888 8899999998888877766667778888999998888999999887654
No 42
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.03 E-value=2.8e-05 Score=59.07 Aligned_cols=67 Identities=10% Similarity=0.244 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhc------C--chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFG------L--KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~------~--~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
++.+..|-..|.+++.+. +++|.|+.++|+.++. . ....++++++.+|.++ +|.|+|+||+..+..+
T Consensus 6 e~~~~~~i~~F~~y~~~~-~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~-dG~Idf~EFv~lm~~l 80 (88)
T cd05029 6 DQAIGLLVAIFHKYSGRE-GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNK-DQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCC-CCCCcHHHHHHHHHHH
Confidence 456778888999998731 1377999999998873 2 1556888999999998 9999999998877644
No 43
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.01 E-value=1.9e-05 Score=60.13 Aligned_cols=66 Identities=17% Similarity=0.331 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHhhhcCCCC-CCcCHHHHHhhhcCc----------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 22 QHELEDLKSLFKSLAAQSQSNG-RYISPSIFQAYFGLK----------GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~~~~~~~-g~i~~~ef~~~l~~~----------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
++.+..|..+|+.++... ++ +.|+++||+.++... +..++.+++.+|.|+ +|.|+|+||+..+..+
T Consensus 5 e~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~-DG~I~f~EF~~l~~~l 81 (89)
T cd05023 5 ERCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNS-DGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHHHH
Confidence 456788999999955321 33 489999999887542 346788999999998 9999999998877654
No 44
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.00 E-value=4e-05 Score=59.03 Aligned_cols=72 Identities=15% Similarity=0.215 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhcC-CC-CCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHH
Q 017239 96 DEIEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (375)
Q Consensus 96 ~ekl~~~F~l~D~-d~-dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef 173 (375)
...++.+|+.||. |+ +|.|+.+||+.++...+... .+...+++.++.+++.+ + . +++|.|+|++|
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~-------lg~~~s~~ei~~~~~~~--D---~-~~dg~I~f~eF 73 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF-------LKNQKDPMAVDKIMKDL--D---Q-NRDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH-------hhccccHHHHHHHHHHh--C---C-CCCCcCcHHHH
Confidence 4468889999997 87 69999999999998633221 12344567888888864 3 2 37899999999
Q ss_pred HHHHHhc
Q 017239 174 RSWCTLI 180 (375)
Q Consensus 174 ~~~~~~~ 180 (375)
..++...
T Consensus 74 ~~l~~~~ 80 (94)
T cd05031 74 VSLVAGL 80 (94)
T ss_pred HHHHHHH
Confidence 9988754
No 45
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.98 E-value=1.9e-05 Score=56.32 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=30.6
Q ss_pred HHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
++|+.+|.++ +|.|+.+|+..++.... -.++.++.+|+.+|.+++|.|+.+|+..++..
T Consensus 3 ~~F~~~D~~~-~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 3 QIFRSLDPDG-DGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred HHHHHhCCCC-CCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4455555555 55555555555554332 13344555555555555555555555555543
No 46
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.95 E-value=5.5e-05 Score=57.49 Aligned_cols=67 Identities=19% Similarity=0.094 Sum_probs=57.2
Q ss_pred HHHHHHHhcC-CCCCcceeHHHHHHHHHh-hcCCCHH-HHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHH
Q 017239 62 GERMFNLVTQ-KRNDHKLTFEDLVVAKAT-YEKGTKD-EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 129 (375)
Q Consensus 62 ~~~lf~~~d~-~~~~g~I~f~eF~~~l~~-~~~~~~~-ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~ 129 (375)
...+|+.+|. ++ +|.|+..||...+.. +...-.. +.++.+++..|.|+||.|+.+|+..++..+...
T Consensus 10 l~~~F~~fd~~~~-~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~ 79 (89)
T cd05022 10 LVSNFHKASVKGG-KESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAKA 79 (89)
T ss_pred HHHHHHHHhCCCC-CCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Confidence 4688999999 88 999999999999987 6533334 779999999999999999999999999876544
No 47
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.95 E-value=2.7e-05 Score=53.25 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=41.5
Q ss_pred CcceeHHHHHHHHHhhcCC-CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 75 DHKLTFEDLVVAKATYEKG-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~-~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
+|.|+.++|..++..+... -.++.++.+|+.+|.|++|.|+.+|+..++..
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 6889999999998766544 55666889999999999999999999888753
No 48
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.94 E-value=5.1e-05 Score=57.66 Aligned_cols=67 Identities=10% Similarity=0.281 Sum_probs=52.4
Q ss_pred HHHHHHHhhcC-CC-CCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHH
Q 017239 98 IEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (375)
Q Consensus 98 kl~~~F~l~D~-d~-dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~ 175 (375)
.+-.+|..||. |+ +|+|+.+||++++..... .+...+++.++++++.+ |. +++|.|+|++|..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~---------lg~k~t~~ev~~m~~~~-----D~-d~dG~Idf~EFv~ 75 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELT---------IGSKLQDAEIAKLMEDL-----DR-NKDQEVNFQEYVT 75 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh---------cCCCCCHHHHHHHHHHh-----cC-CCCCCCcHHHHHH
Confidence 45668999998 67 899999999999975221 24556778899999875 33 3889999999999
Q ss_pred HHHh
Q 017239 176 WCTL 179 (375)
Q Consensus 176 ~~~~ 179 (375)
++..
T Consensus 76 lm~~ 79 (88)
T cd05029 76 FLGA 79 (88)
T ss_pred HHHH
Confidence 8875
No 49
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.92 E-value=3.6e-05 Score=59.31 Aligned_cols=60 Identities=22% Similarity=0.299 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhh-hcCCC-CCCcCHHHHHhhhcC----------chhHHHHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 25 LEDLKSLFKSLAA-QSQSN-GRYISPSIFQAYFGL----------KGALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 25 i~~l~~~F~~ld~-~~~~~-~g~i~~~ef~~~l~~----------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
+..++++|..+|. + + +|.|+.++|..++.. ....++.+++.+|.++ +|.|+|+||+.++.
T Consensus 7 ~~~l~~~F~~~D~~d---g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~-dg~I~f~eF~~l~~ 78 (94)
T cd05031 7 MESLILTFHRYAGKD---GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNR-DGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHHhccC---CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCC-CCcCcHHHHHHHHH
Confidence 4556666666664 3 3 466666666655431 1334566666666666 66666666665544
No 50
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.90 E-value=8.7e-05 Score=68.17 Aligned_cols=136 Identities=13% Similarity=0.177 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-------
Q 017239 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE------- 91 (375)
Q Consensus 24 ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~------- 91 (375)
..++|...+.++|.+ ++|.|+..++....... ..-+.+-+...|.+. +|.|+|+|+........
T Consensus 75 ~~~rl~~l~~~iD~~---~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~-Dg~i~~eey~~~~~~~~~~~~~~~ 150 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSD---SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNK-DGFITWEEYLPQTYGRVDLPDEFP 150 (325)
T ss_pred hHHHHHHHHhhhcCC---CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cceeeHHHhhhhhhhcccCccccc
Confidence 456788889999976 79999999999765543 234567778889998 99999999999877431
Q ss_pred CCC---HHHH----HHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCC
Q 017239 92 KGT---KDEI----EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSS 164 (375)
Q Consensus 92 ~~~---~~ek----l~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~ 164 (375)
... ...+ -+.-|+.=|.|+||.+|.+||..++.-- ..+....-.+..-+.. .|. ++
T Consensus 151 d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPE-----------e~p~M~~iVi~Etl~d-----~Dk-n~ 213 (325)
T KOG4223|consen 151 DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPE-----------EHPHMKDIVIAETLED-----IDK-NG 213 (325)
T ss_pred cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChh-----------hcchHHHHHHHHHHhh-----ccc-CC
Confidence 111 1111 2346889999999999999999877421 0111111123332332 344 49
Q ss_pred CCCCCHHHHHHHHHhc
Q 017239 165 NKSMSFEDFRSWCTLI 180 (375)
Q Consensus 165 dg~Is~~ef~~~~~~~ 180 (375)
||.|+++||+.=+...
T Consensus 214 DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 214 DGKISLEEFIGDLYSH 229 (325)
T ss_pred CCceeHHHHHhHHhhc
Confidence 9999999998766543
No 51
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.87 E-value=7.3e-05 Score=53.28 Aligned_cols=58 Identities=22% Similarity=0.405 Sum_probs=50.1
Q ss_pred HHHHHHHhhhcCCCCCCcCHHHHHhhh---cCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 29 KSLFKSLAAQSQSNGRYISPSIFQAYF---GLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 29 ~~~F~~ld~~~~~~~g~i~~~ef~~~l---~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
++.|+.+|.+ ++|.|+.+++..++ +.+...++++++.+|.++ +|.|+|+||+.++..+
T Consensus 2 ~~~F~~~D~~---~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~-~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPD---GDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDK-DGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCC---CCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCC-CCcCCHHHHHHHHHHH
Confidence 5689999887 78999999999887 334677899999999999 9999999999988754
No 52
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.87 E-value=0.00011 Score=56.01 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=52.7
Q ss_pred HHHHHHHHh-hcCCCCC-ccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHH
Q 017239 97 EIEEFIYQL-LDVNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (375)
Q Consensus 97 ekl~~~F~l-~D~d~dG-~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~ 174 (375)
..+..+|+. +|.++++ .|+.+||+.++...+.... +....+..++.+++.+ |. ++||.|+|+||.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~-------~~~~~~~~~~~ll~~~-----D~-d~DG~I~f~EF~ 75 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFT-------KNQKDPGVLDRMMKKL-----DL-NSDGQLDFQEFL 75 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhh-------cCCCCHHHHHHHHHHc-----CC-CCCCcCcHHHHH
Confidence 457788999 6788876 9999999999988544321 1233456788888875 33 389999999999
Q ss_pred HHHHh
Q 017239 175 SWCTL 179 (375)
Q Consensus 175 ~~~~~ 179 (375)
.++..
T Consensus 76 ~l~~~ 80 (89)
T cd05023 76 NLIGG 80 (89)
T ss_pred HHHHH
Confidence 98875
No 53
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.87 E-value=0.00011 Score=55.88 Aligned_cols=63 Identities=10% Similarity=0.220 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHh-hhcCCCCC-CcCHHHHHhhhcC-----c-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 23 HELEDLKSLFKSLA-AQSQSNGR-YISPSIFQAYFGL-----K-----GALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 23 ~ei~~l~~~F~~ld-~~~~~~~g-~i~~~ef~~~l~~-----~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
.-+..+.++|+.+| ++ ++| .|+.++|+.++.. . ...++++++.+|.++ +|.|+|+||+..+..
T Consensus 5 ~~~~~l~~aF~~fD~~d---gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~-dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGRE---GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDG-DGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccC---CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHH
Confidence 34566677777775 44 566 4777777666543 1 233666666667666 677777777666543
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.86 E-value=5.4e-05 Score=60.47 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=43.1
Q ss_pred hHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHH
Q 017239 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l 123 (375)
..+...|..+|.|+ +|.|+.+|+..+. ....+..+...|+.+|.|+||.||.+|+..++
T Consensus 48 ~~l~w~F~~lD~d~-DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 48 DPVGWMFNQLDGNY-DGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHCCCC-CCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 34667777788887 8888888887654 23346667777888888888888888887777
No 55
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.86 E-value=0.00011 Score=55.88 Aligned_cols=71 Identities=13% Similarity=0.186 Sum_probs=53.2
Q ss_pred HHHHHHHHHhhcC--CCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHH
Q 017239 96 DEIEEFIYQLLDV--NDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (375)
Q Consensus 96 ~ekl~~~F~l~D~--d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef 173 (375)
.+.++.+|+.||. |++|.|+.+||..++...+... .+.......++.++... +. +++|.|+|++|
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~-------~~~~~~~~ei~~i~~~~--d~----~~~g~I~f~eF 73 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNF-------LKNQKDPEAVDKIMKDL--DV----NKDGKVDFQEF 73 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhh-------ccCCCCHHHHHHHHHHh--cc----CCCCcCcHHHH
Confidence 3568889999999 8999999999999997633211 11223466788888864 22 37899999999
Q ss_pred HHHHHh
Q 017239 174 RSWCTL 179 (375)
Q Consensus 174 ~~~~~~ 179 (375)
..++..
T Consensus 74 ~~~~~~ 79 (88)
T cd00213 74 LVLIGK 79 (88)
T ss_pred HHHHHH
Confidence 998875
No 56
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.82 E-value=7.5e-05 Score=56.53 Aligned_cols=64 Identities=17% Similarity=0.298 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC--------c--hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL--------K--GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~--------~--~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
+.-+.-|-.+|.+++. +.+.+++.||+.++.. . +..++++++.+|.|+ ||.|+|.||+..+..+
T Consensus 4 E~ai~~lI~~FhkYaG----~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~-Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 4 EHSMEKMMLTFHKFAG----EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCR-DGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHHHcC----CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHH
Confidence 3457788899999985 4679999999988643 1 446899999999999 9999999999987754
No 57
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.81 E-value=0.00023 Score=67.78 Aligned_cols=134 Identities=12% Similarity=0.171 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC----chhHHHHHH-HHhcCCCCCcceeHHHHHHHHHhh--cCC------
Q 017239 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGL----KGALGERMF-NLVTQKRNDHKLTFEDLVVAKATY--EKG------ 93 (375)
Q Consensus 27 ~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~----~~~~~~~lf-~~~d~~~~~g~I~f~eF~~~l~~~--~~~------ 93 (375)
.|.+.|+.+|.+ .+|+|+......+++. .-|+. .|- +....+. +|.+.|.+.+..+..- .+.
T Consensus 465 dL~~eF~~~D~~---ksG~lsis~Wa~~mE~i~~L~LPWr-~L~~kla~~s~-d~~v~Y~~~~~~l~~e~~~~ea~~slv 539 (631)
T KOG0377|consen 465 DLEDEFRKYDPK---KSGKLSISHWAKCMENITGLNLPWR-LLRPKLANGSD-DGKVEYKSTLDNLDTEVILEEAGSSLV 539 (631)
T ss_pred HHHHHHHhcChh---hcCeeeHHHHHHHHHHHhcCCCcHH-HhhhhccCCCc-CcceehHhHHHHhhhhhHHHHHHhHHH
Confidence 566788888886 7899999988877653 22221 111 1222233 7788888877655321 111
Q ss_pred ----CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCC
Q 017239 94 ----TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMS 169 (375)
Q Consensus 94 ----~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is 169 (375)
.....+..+|+.+|.|++|.|+.+||+.+.+-+..- ......++.+.++.+.+.+ ++||.|.
T Consensus 540 etLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh--------~~~~i~~~~i~~la~~mD~------NkDG~ID 605 (631)
T KOG0377|consen 540 ETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSH--------MNGAISDDEILELARSMDL------NKDGKID 605 (631)
T ss_pred HHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhh--------cCCCcCHHHHHHHHHhhcc------CCCCccc
Confidence 113457789999999999999999999988764332 2345567788887777622 3899999
Q ss_pred HHHHHHHHHh
Q 017239 170 FEDFRSWCTL 179 (375)
Q Consensus 170 ~~ef~~~~~~ 179 (375)
+.||...+..
T Consensus 606 lNEfLeAFrl 615 (631)
T KOG0377|consen 606 LNEFLEAFRL 615 (631)
T ss_pred HHHHHHHHhh
Confidence 9999877653
No 58
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=97.81 E-value=0.00015 Score=59.89 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=81.6
Q ss_pred cCCCC--HHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC------chhHHHHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 17 SRSFA--QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------KGALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 17 ~t~fs--~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
+-+|. ++||.+|..- .++. +.|+|+.++|...+.. +...+.+.|+.+|.+. +|.|++.+|...+-
T Consensus 61 alGFE~~k~ei~kll~d---~dk~---~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~-~Gkis~~~lkrvak 133 (172)
T KOG0028|consen 61 ALGFEPKKEEILKLLAD---VDKE---GSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDK-TGKISQRNLKRVAK 133 (172)
T ss_pred HcCCCcchHHHHHHHHh---hhhc---cCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccC-CCCcCHHHHHHHHH
Confidence 33453 4555555433 3443 6799999999976432 2556889999999999 99999999999999
Q ss_pred hhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 89 TYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 89 ~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.+...-.++.++...+-.|.|++|-|+.+|+..+++.
T Consensus 134 eLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 134 ELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 8987777888999999999999999999999988754
No 59
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.80 E-value=0.00011 Score=55.96 Aligned_cols=67 Identities=15% Similarity=0.316 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC------c----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 22 QHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------K----GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 22 ~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~------~----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
++-+..+.+.|..++.. .+.+|.|+.++|..++.. + ...++.+|+.+|.++ +|.|+|+||+..+..+
T Consensus 4 e~~i~~~~~~f~~y~~~-~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~-dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 4 EKAIETIINVFHQYSVR-KGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQ-DGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHHhcc-CCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHHHH
Confidence 45677888999999864 114679999999988852 1 345788888888888 8889999988877644
No 60
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.78 E-value=0.00016 Score=55.84 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=57.4
Q ss_pred HHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHH
Q 017239 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 129 (375)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~ 129 (375)
...++|..+|.++ +|.|+.+++..++... +-.++.++.+|+.+|.+++|.|+.+|+..++..+...
T Consensus 11 ~l~~~F~~~D~d~-~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~ 76 (96)
T smart00027 11 KYEQIFRSLDKNQ-DGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK 76 (96)
T ss_pred HHHHHHHHhCCCC-CCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence 3678999999999 9999999999998764 3456778899999999999999999999999876655
No 61
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.77 E-value=4.3e-05 Score=72.59 Aligned_cols=128 Identities=17% Similarity=0.276 Sum_probs=81.6
Q ss_pred CcCHHHHHhhh--cCch--hHHHHHHHHhc-------------------CCCCCcceeHHHHHHHHHhhcCCCHHHHHHH
Q 017239 45 YISPSIFQAYF--GLKG--ALGERMFNLVT-------------------QKRNDHKLTFEDLVVAKATYEKGTKDEIEEF 101 (375)
Q Consensus 45 ~i~~~ef~~~l--~~~~--~~~~~lf~~~d-------------------~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~ 101 (375)
.++.++|..-+ +.+. .+.-+-++.+| .+. +|.|+|.||+-.++.+. .++.-.+.
T Consensus 161 yMTP~DFlrSi~p~~~qpe~~gld~~k~~~~~~~~~~~~~~~~~siF~~lg~-~GLIsfSdYiFLlTlLS--~p~~~F~I 237 (489)
T KOG2643|consen 161 YMTPEDFLRSITPGAKQPERLGLDKLKDIDEKLKKELPKFSDGDSIFYKLGE-SGLISFSDYIFLLTLLS--IPERNFRI 237 (489)
T ss_pred EeCHHHHHHhcCCCCCCchhhhhHHHhhhchhccccCccCCCCCeeEEEcCC-CCeeeHHHHHHHHHHHc--cCccccee
Confidence 78999998653 3332 23333333332 222 88999999999888876 34556888
Q ss_pred HHHhhcCCCCCccCHHHHHHHHHHHHHHH-hchhh--cccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHH
Q 017239 102 IYQLLDVNDDGVLGRSDLESVVIAMLEII-FSMEI--SERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 178 (375)
Q Consensus 102 ~F~l~D~d~dG~Is~~El~~~l~~~~~~~-~~~~~--~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~ 178 (375)
+|++||.|+||.|+.+|+..+.+.+..-. ...+. --.......-.++.-+....|... +++++++++|.+++.
T Consensus 238 AFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~r----g~~kLs~deF~~F~e 313 (489)
T KOG2643|consen 238 AFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKR----GNGKLSIDEFLKFQE 313 (489)
T ss_pred eeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccC----CCccccHHHHHHHHH
Confidence 99999999999999999998875432211 00000 000111112234444444455443 789999999999998
Q ss_pred h
Q 017239 179 L 179 (375)
Q Consensus 179 ~ 179 (375)
.
T Consensus 314 ~ 314 (489)
T KOG2643|consen 314 N 314 (489)
T ss_pred H
Confidence 6
No 62
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.76 E-value=2.4e-05 Score=46.13 Aligned_cols=27 Identities=11% Similarity=0.262 Sum_probs=17.5
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 99 EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 99 l~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
++.+|+.||.|+||.|+.+||..+++.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 455666666666666666666666653
No 63
>PLN02964 phosphatidylserine decarboxylase
Probab=97.72 E-value=0.00026 Score=72.37 Aligned_cols=112 Identities=15% Similarity=0.253 Sum_probs=77.9
Q ss_pred CcCHHHHHhhhcC--c------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-CCCHHHH---HHHHHHhhcCCCCC
Q 017239 45 YISPSIFQAYFGL--K------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEI---EEFIYQLLDVNDDG 112 (375)
Q Consensus 45 ~i~~~ef~~~l~~--~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~~ek---l~~~F~l~D~d~dG 112 (375)
.++++++...-.. . .....+.|+.+|.++ +|.+ +-.++..+. ....++. ++.+|+.+|.|++|
T Consensus 120 ~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dg-dG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG 194 (644)
T PLN02964 120 RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSS-SNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDG 194 (644)
T ss_pred CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCC-CCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 4555555544333 1 123567799999999 9997 333333333 1222333 89999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 113 VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 113 ~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
.|+.+||..++..+ +....++.+..+|+.. |. +++|.|+++|+...+..
T Consensus 195 ~IdfdEFl~lL~~l------------g~~~seEEL~eaFk~f--Dk----DgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 195 QLSFSEFSDLIKAF------------GNLVAANKKEELFKAA--DL----NGDGVVTIDELAALLAL 243 (644)
T ss_pred eEcHHHHHHHHHHh------------ccCCCHHHHHHHHHHh--CC----CCCCcCCHHHHHHHHHh
Confidence 99999999999752 2234566788888853 33 38899999999998876
No 64
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.72 E-value=0.00014 Score=68.75 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHh
Q 017239 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQL 105 (375)
Q Consensus 26 ~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l 105 (375)
+.....|...|.+ .+|.++.++|..++...+....++|..+|.++ ||.|+-.|....+..+...-.++++...|+.
T Consensus 51 ~~~~~l~~~~d~~---~dg~vDy~eF~~Y~~~~E~~l~~~F~~iD~~h-dG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~ 126 (463)
T KOG0036|consen 51 EAAKMLFSAMDAN---RDGRVDYSEFKRYLDNKELELYRIFQSIDLEH-DGKIDPNEIWRYLKDLGIQLSDEKAAKFFEH 126 (463)
T ss_pred HHHHHHHHhcccC---cCCcccHHHHHHHHHHhHHHHHHHHhhhcccc-CCccCHHHHHHHHHHhCCccCHHHHHHHHHH
Confidence 3455667777776 78999999999999988777889999999999 9999999999999988866667888889999
Q ss_pred hcCCCCCccCHHHHHHHHH
Q 017239 106 LDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 106 ~D~d~dG~Is~~El~~~l~ 124 (375)
.|.++++.|+.+|.++.+.
T Consensus 127 ~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 127 MDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred hccCCCeeeccHHHHhhhh
Confidence 9999999999999998764
No 65
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.72 E-value=0.00012 Score=50.43 Aligned_cols=61 Identities=18% Similarity=0.442 Sum_probs=48.6
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 99 l~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
++.+|+.+|.+++|.|+.+|+..++... +.......+..++... +. +++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~------------~~~~~~~~~~~~~~~~--~~----~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL------------GEGLSEEEIDEMIREV--DK----DGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh------------CCCCCHHHHHHHHHHh--CC----CCCCeEeHHHHHHHh
Confidence 5678999999999999999999998763 3455667777888764 22 267899999998875
No 66
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.68 E-value=0.00016 Score=57.81 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhh-cCchhHHHHHHHHhcCCCCCcceeHHHHHHHH
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF-GLKGALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l-~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (375)
.+.+.....+.-.|..+|.+ ++|.|+.+|+..+. ......+.++|+.+|.|+ +|.|+++||...+
T Consensus 41 ~~~~~~~~~l~w~F~~lD~d---~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~-Dg~IS~~Ef~~cl 106 (116)
T cd00252 41 SLYPMCKDPVGWMFNQLDGN---YDGKLSHHELAPIRLDPNEHCIKPFFESCDLDK-DGSISLDEWCYCF 106 (116)
T ss_pred hhhHHHHHHHHHHHHHHCCC---CCCcCCHHHHHHHHccchHHHHHHHHHHHCCCC-CCCCCHHHHHHHH
Confidence 44677888999999999998 89999999999875 223677899999999999 9999999999987
No 67
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.48 E-value=0.00019 Score=42.27 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 62 GERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
++++|+.+|+|+ +|.|+++||+.++..
T Consensus 2 ~~~~F~~~D~d~-dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDG-DGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTS-SSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCC-CCcCCHHHHHHHHHh
Confidence 568999999999 999999999998864
No 68
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.45 E-value=0.00028 Score=48.12 Aligned_cols=45 Identities=16% Similarity=0.286 Sum_probs=38.9
Q ss_pred CCCcCHHHHHhhhc------CchhHHHHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 43 GRYISPSIFQAYFG------LKGALGERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 43 ~g~i~~~ef~~~l~------~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
+|.|+.++|..++. .....++.||..+|.++ +|.|+|+||+.++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~-~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDG-DGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSS-SSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCC-CCCCCHHHHHHHHH
Confidence 68999999998762 23556899999999999 99999999999875
No 69
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=97.44 E-value=0.00047 Score=68.80 Aligned_cols=104 Identities=28% Similarity=0.351 Sum_probs=80.5
Q ss_pred ccccCCCCHHHHHHHHHHHHHHhhhcCCC--CCC---------cCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCc
Q 017239 14 VSASRSFAQHELEDLKSLFKSLAAQSQSN--GRY---------ISPSIFQAYFGLK------GALGERMFNLVTQKRNDH 76 (375)
Q Consensus 14 ~~~~t~fs~~ei~~l~~~F~~ld~~~~~~--~g~---------i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g 76 (375)
+...+.|+.+|++.|+.+|+.--.....+ .-. |+.+.|...+... ..+++++|+.+|.+. +|
T Consensus 492 ~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~-~g 570 (671)
T KOG4347|consen 492 VVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSM-TG 570 (671)
T ss_pred hcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCC-cc
Confidence 34566899999999999997642210001 112 3344444444442 346789999999999 99
Q ss_pred ceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHH
Q 017239 77 KLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDL 119 (375)
Q Consensus 77 ~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El 119 (375)
.|+|.+++.+++.++.+...++++.+|+++|.+++ ....+|+
T Consensus 571 ~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 571 LLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred eeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 99999999999999999999999999999999999 8888888
No 70
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.43 E-value=0.0009 Score=57.34 Aligned_cols=101 Identities=21% Similarity=0.314 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC---c-hhH-HHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---K-GAL-GERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~---~-~~~-~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (375)
.||.++|+.+...|+.+|.+ .||.|+..|++.++.. + ..+ ...+.+..|.|. +|+|+|.||+.++.....+
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~---rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~-dgklSfreflLIfrkaaag 167 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDED---RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDF-DGKLSFREFLLIFRKAAAG 167 (244)
T ss_pred HHHHHHHHHHHHHHHHhccc---ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhccc-ccchhHHHHHHHHHHHhcc
Confidence 78999999999999999987 7999999999988654 3 233 578889999999 9999999999887654433
Q ss_pred CH--HHHHHHHHHh--hcCCCCCccCHHHHHHHH
Q 017239 94 TK--DEIEEFIYQL--LDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 94 ~~--~ekl~~~F~l--~D~d~dG~Is~~El~~~l 123 (375)
.. ++-+..+=++ .|....|......+.++-
T Consensus 168 EL~~ds~~~~LAr~~eVDVskeGV~GAknFFeAK 201 (244)
T KOG0041|consen 168 ELQEDSGLLRLARLSEVDVSKEGVSGAKNFFEAK 201 (244)
T ss_pred ccccchHHHHHHHhcccchhhhhhhhHHHHHHHH
Confidence 22 3334444444 677666776666655443
No 71
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.0016 Score=62.12 Aligned_cols=129 Identities=16% Similarity=0.351 Sum_probs=88.4
Q ss_pred HHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc---h------------------hHHH-HHHHHhcCCCCCcceeHHHHHH
Q 017239 28 LKSLFKSLAAQSQSNGRYISPSIFQAYFGLK---G------------------ALGE-RMFNLVTQKRNDHKLTFEDLVV 85 (375)
Q Consensus 28 l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~---~------------------~~~~-~lf~~~d~~~~~g~I~f~eF~~ 85 (375)
+.-+|+.+|.+ ++|.|+++||.....+. . ..-. -+-..|..++ ++++++++|+.
T Consensus 235 F~IAFKMFD~d---gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg-~~kLs~deF~~ 310 (489)
T KOG2643|consen 235 FRIAFKMFDLD---GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRG-NGKLSIDEFLK 310 (489)
T ss_pred ceeeeeeeecC---CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCC-CccccHHHHHH
Confidence 34468888887 89999999998765331 0 0111 2334567788 99999999999
Q ss_pred HHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCC
Q 017239 86 AKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSN 165 (375)
Q Consensus 86 ~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~d 165 (375)
++..+ .+|.++.=|.-+|...+|.|+..++..++-..-.. ....-......+-++ +. +.+
T Consensus 311 F~e~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~---------n~~~k~~~lkrvk~k--f~-----~~~ 370 (489)
T KOG2643|consen 311 FQENL----QEEILELEFERFDKGDSGAISEVDFAELLLAYAGV---------NSKKKHKYLKRVKEK--FK-----DDG 370 (489)
T ss_pred HHHHH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHHccc---------chHhHHHHHHHHHHh--cc-----CCC
Confidence 99876 47888889999999888999999999988653221 111111233333332 11 124
Q ss_pred CCCCHHHHHHHHHhc
Q 017239 166 KSMSFEDFRSWCTLI 180 (375)
Q Consensus 166 g~Is~~ef~~~~~~~ 180 (375)
..||++||..++.--
T Consensus 371 ~gISl~Ef~~Ff~Fl 385 (489)
T KOG2643|consen 371 KGISLQEFKAFFRFL 385 (489)
T ss_pred CCcCHHHHHHHHHHH
Confidence 569999999988753
No 72
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.39 E-value=0.00016 Score=43.34 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=23.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
+++.+|+.||.|++|.|+.+||..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999887
No 73
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.32 E-value=0.00027 Score=55.32 Aligned_cols=67 Identities=22% Similarity=0.345 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC---chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~---~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
.++++|..+..+.|+.++. .+|.|+-++...+|.. +......|+...|.++ +|.++++||+.+|-.+
T Consensus 3 ~ls~~e~~~y~~~F~~l~~----~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~-dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP----QDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDN-DGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS----STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSS-SSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC----CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCC-CCcCCHHHHHHHHHHH
Confidence 4678899999999998875 4789998888887753 4677889999999998 9999999999887643
No 74
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.21 E-value=0.0048 Score=59.82 Aligned_cols=99 Identities=20% Similarity=0.372 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCHHHHHhh-hcC---c--hhHHHHHHH-HhcCCCCCcceeHHHHHHHHHhhcCCCHH
Q 017239 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAY-FGL---K--GALGERMFN-LVTQKRNDHKLTFEDLVVAKATYEKGTKD 96 (375)
Q Consensus 24 ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~-l~~---~--~~~~~~lf~-~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ 96 (375)
+-++|+..|.++.+-...+...++.++|.+. +++ + ++...+|.. .-|..+ ||.|+|+||+..=+.+|. ++
T Consensus 31 ~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tK-Dglisf~eF~afe~~lC~--pD 107 (694)
T KOG0751|consen 31 DPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTK-DGLISFQEFRAFESVLCA--PD 107 (694)
T ss_pred ChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcc-cccccHHHHHHHHhhccC--ch
Confidence 3345555565554432225668999999854 433 2 455555554 446777 999999999998888773 46
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 97 EIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 97 ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
..-..+|.+||..++|.+|.+++.+++..
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQ 136 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence 67788999999999999999999999875
No 75
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.19 E-value=0.00037 Score=39.50 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=16.9
Q ss_pred HHHHHhhcCCCCCccCHHHHHHHH
Q 017239 100 EFIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 100 ~~~F~l~D~d~dG~Is~~El~~~l 123 (375)
+.+|+.+|.|+||.|+.+|+.+++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 456777777777777777777653
No 76
>PF14658 EF-hand_9: EF-hand domain
Probab=97.10 E-value=0.0017 Score=45.93 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=53.9
Q ss_pred HHHHHhcCCCCCcceeHHHHHHHHHhhcC-CCHHHHHHHHHHhhcCCCC-CccCHHHHHHHHHH
Q 017239 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEK-GTKDEIEEFIYQLLDVNDD-GVLGRSDLESVVIA 125 (375)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~-~~~~ekl~~~F~l~D~d~d-G~Is~~El~~~l~~ 125 (375)
..|++||.++ .|.|.-..++.+|..+.. ...++.++.+.+.+|.++. |.|+.+.+..+|+.
T Consensus 2 ~~F~~fD~~~-tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQK-TGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcC-CceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4689999998 999999999999988875 7778899999999999988 99999999988864
No 77
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.98 E-value=0.0039 Score=47.27 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=52.6
Q ss_pred HHHHHHHhcCCC-CCcceeHHHHHHHHH-hhcCCCH----HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 62 GERMFNLVTQKR-NDHKLTFEDLVVAKA-TYEKGTK----DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 62 ~~~lf~~~d~~~-~~g~I~f~eF~~~l~-~~~~~~~----~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
+-.+|..++.+. .+|.|+.+||..++. .+..... ++.+..+|+.+|.|++|.|+.+||..++..+..
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 346777777552 278999999999996 3433222 788999999999999999999999998887543
No 78
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.96 E-value=0.011 Score=64.08 Aligned_cols=101 Identities=16% Similarity=0.250 Sum_probs=84.5
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC------------chhHHHHHHHHhcCCCCCcceeHHHHHH
Q 017239 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL------------KGALGERMFNLVTQKRNDHKLTFEDLVV 85 (375)
Q Consensus 18 t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~------------~~~~~~~lf~~~d~~~~~g~I~f~eF~~ 85 (375)
++.|++.+.++.-.|+.+|.+ .+|.++.++|..|++. |.|..+++.+.+|.++ +|.|+..+|+.
T Consensus 2245 ~GVtEe~L~EFs~~fkhFDke---k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r-~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2245 NGVTEEQLKEFSMMFKHFDKE---KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNR-DGYVSLQDYMA 2320 (2399)
T ss_pred CCCCHHHHHHHHHHHHHhchh---hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCC-cCcccHHHHHH
Confidence 478999999999999999997 7899999999998754 2456789999999999 99999999999
Q ss_pred HHHhhc--CCCHHHHHHHHHHhhcCCCCCccCHHHHHHHH
Q 017239 86 AKATYE--KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 86 ~l~~~~--~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l 123 (375)
+|..-. .-...+.+.-+|+.+|. +.-+|+++++..-+
T Consensus 2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~l 2359 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNL 2359 (2399)
T ss_pred HHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcC
Confidence 986533 22225589999999998 78899999886544
No 79
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.92 E-value=0.0036 Score=60.70 Aligned_cols=56 Identities=21% Similarity=0.342 Sum_probs=48.7
Q ss_pred hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 59 GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 59 ~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
...+..+|+.+|.++ +|.|+.+||+. +..+|+.+|.|+||.|+.+|+..++...++
T Consensus 333 ~~~l~~aF~~~D~dg-dG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 333 THAAQEIFRLYDLDG-DGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred hHHHHHHHHHhCCCC-CCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 345689999999999 99999999952 467899999999999999999999987654
No 80
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=96.90 E-value=0.0033 Score=47.57 Aligned_cols=84 Identities=15% Similarity=0.301 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhch-hhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHH
Q 017239 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSM-EISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 174 (375)
Q Consensus 96 ~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~ 174 (375)
++|.+++|+++ .|.+|.++...|..++..++..--.. +....|. ++..+...|+.. .....|+.++|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~--~e~sv~sCF~~~--------~~~~~I~~~~Fl 70 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY--IEPSVRSCFQQV--------QLSPKITENQFL 70 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT----HHHHHHHHHHT--------TT-S-B-HHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC--cHHHHHHHhccc--------CCCCccCHHHHH
Confidence 58999999999 57899999999999999887753211 1112222 555666655542 135689999999
Q ss_pred HHHHhcchHHHHhhcc
Q 017239 175 SWCTLIPSARKFLGGL 190 (375)
Q Consensus 175 ~~~~~~p~~~~~l~~l 190 (375)
+|+...|..+-++..+
T Consensus 71 ~wl~~ePq~lVWLP~l 86 (90)
T PF09069_consen 71 DWLMSEPQSLVWLPTL 86 (90)
T ss_dssp HHHHT--TTTTHHHHH
T ss_pred HHHHhCCCeeeHHHHH
Confidence 9999999876666543
No 81
>PF14658 EF-hand_9: EF-hand domain
Probab=96.87 E-value=0.0038 Score=44.11 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=48.9
Q ss_pred HHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 101 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 101 ~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
.+|++||.++.|.|...++..+++++-. ....+..++.+.+++ |+...+|.|+++.|...|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~-----------~~p~e~~Lq~l~~el-----DP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTG-----------RSPEESELQDLINEL-----DPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcC-----------CCCcHHHHHHHHHHh-----CCCCCCceEeHHHHHHHHHH
Confidence 3799999999999999999999988532 134566888887775 43334599999999887753
No 82
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.80 E-value=0.012 Score=44.59 Aligned_cols=68 Identities=13% Similarity=0.226 Sum_probs=50.7
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
.+-.+|..|.. ..+.+++.||+.+++.-+..... .......++.++..+ | . ++||.|+|.||..++
T Consensus 9 ~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~-------~~~d~~~vd~im~~L--D---~-n~Dg~vdF~EF~~Lv 74 (91)
T cd05024 9 KMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLK-------NQNDPMAVDKIMKDL--D---D-CRDGKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHc-------CCCCHHHHHHHHHHh--C---C-CCCCcCcHHHHHHHH
Confidence 34557888884 35689999999999886665433 233456788888876 3 3 389999999999988
Q ss_pred Hh
Q 017239 178 TL 179 (375)
Q Consensus 178 ~~ 179 (375)
..
T Consensus 75 ~~ 76 (91)
T cd05024 75 AG 76 (91)
T ss_pred HH
Confidence 75
No 83
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=96.71 E-value=0.0052 Score=50.06 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=63.5
Q ss_pred CCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCH-HHHH----HHHHHhhcCCC
Q 017239 42 NGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTK-DEIE----EFIYQLLDVND 110 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~-~ekl----~~~F~l~D~d~ 110 (375)
+.|.++.++|..+|... ..-+.-.|+.+|-++ |+.|.-.++...+..+.++.. ++.. ..+..--|.|+
T Consensus 84 G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~-D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~Dg 162 (189)
T KOG0038|consen 84 GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDG-DEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDG 162 (189)
T ss_pred CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCC-CCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCC
Confidence 78999999999887653 222455677889999 999999999999998885432 3333 33444458999
Q ss_pred CCccCHHHHHHHHHH
Q 017239 111 DGVLGRSDLESVVIA 125 (375)
Q Consensus 111 dG~Is~~El~~~l~~ 125 (375)
||.|+..|+..++..
T Consensus 163 Dgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 163 DGKLSFAEFEHVILR 177 (189)
T ss_pred CCcccHHHHHHHHHh
Confidence 999999999998864
No 84
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.60 E-value=0.029 Score=46.33 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=71.3
Q ss_pred CCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccC
Q 017239 42 NGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLG 115 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is 115 (375)
..|-|+..-|..+|+.. ...+-.-|+.||.++ +|.|+-+.+...|......=.++.+..+|+.+-.|..|.|.
T Consensus 77 a~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~-~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~d 155 (171)
T KOG0031|consen 77 APGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEG-SGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFD 155 (171)
T ss_pred CCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccC-CCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCcee
Confidence 56889999999988762 345678889999999 99999999999999888665688899999999999999999
Q ss_pred HHHHHHHHH
Q 017239 116 RSDLESVVI 124 (375)
Q Consensus 116 ~~El~~~l~ 124 (375)
+.+|..+|+
T Consensus 156 y~~~~~~it 164 (171)
T KOG0031|consen 156 YKAFTYIIT 164 (171)
T ss_pred HHHHHHHHH
Confidence 999999886
No 85
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.38 E-value=0.057 Score=43.87 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=79.8
Q ss_pred hHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCC--CCCccCHHHHHHHHHHHHHHHhchhhcc
Q 017239 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVN--DDGVLGRSDLESVVIAMLEIIFSMEISE 137 (375)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d--~dG~Is~~El~~~l~~~~~~~~~~~~~~ 137 (375)
+....+|..||..+ |++|++.+.-..|..+...+.+..+..+...++.+ +-..|+.+++.-++.++...
T Consensus 11 ~e~ke~F~lfD~~g-D~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn-------- 81 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTG-DGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN-------- 81 (152)
T ss_pred HHHHHHHHHHhccC-cccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc--------
Confidence 44679999999998 99999999999999998777777777777777766 44678999998888876543
Q ss_pred cCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 138 RGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 138 ~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
......++.++- ++ .||+. +.|.|...++++.+..
T Consensus 82 k~q~t~edfveg-Lr--vFDke----g~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 82 KDQGTYEDFVEG-LR--VFDKE----GNGTIMGAELRHVLTT 116 (152)
T ss_pred cccCcHHHHHHH-HH--hhccc----CCcceeHHHHHHHHHH
Confidence 234455666665 34 24443 8899999999998875
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.18 E-value=0.0086 Score=33.82 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=18.3
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVA 86 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~ 86 (375)
+.+|+.+|.|+ +|.|+++||...
T Consensus 2 ~~~F~~~D~d~-DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDG-DGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTS-SSEEEHHHHHHH
T ss_pred HHHHHHHcCCC-CCcCCHHHHHHH
Confidence 46788888888 888888888764
No 87
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=96.10 E-value=0.023 Score=48.94 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=59.7
Q ss_pred HHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
....+|+.+|.++ ||.||+.|+..+|..+....+.--++.+.+-.|.|.||.|+..|+.-++.....
T Consensus 100 ~~~~~Fk~yDe~r-DgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 100 DAESMFKQYDEDR-DGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHHhcccc-cccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 3679999999999 999999999999999987777778899999999999999999999888876543
No 88
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.05 E-value=0.018 Score=55.27 Aligned_cols=64 Identities=14% Similarity=0.246 Sum_probs=53.3
Q ss_pred HHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC----CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Q 017239 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKG----TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 126 (375)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~----~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~ 126 (375)
.+-||+.+|.++ +|.|+.+||..+...+... -....+..+-+..|.|+||.|+..||.+++.-+
T Consensus 549 LetiF~~iD~D~-SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 549 LETIFNIIDADN-SGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHHHHhccCC-CCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 578999999999 9999999999998777532 225556667889999999999999999988653
No 89
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.02 E-value=0.013 Score=56.80 Aligned_cols=52 Identities=13% Similarity=0.293 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 27 DLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 27 ~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
.+...|+.+|.+ ++|.|+.+||.. ++.+|+.+|.|+ +|.|+++||..++...
T Consensus 335 ~l~~aF~~~D~d---gdG~Is~~E~~~--------~~~~F~~~D~d~-DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 335 AAQEIFRLYDLD---GDGFITREEWLG--------SDAVFDALDLNH-DGKITPEEMRAGLGAA 386 (391)
T ss_pred HHHHHHHHhCCC---CCCcCcHHHHHH--------HHHHHHHhCCCC-CCCCcHHHHHHHHHHH
Confidence 566788888887 899999999953 578999999999 9999999999988754
No 90
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.98 E-value=0.039 Score=43.14 Aligned_cols=79 Identities=10% Similarity=0.185 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHH
Q 017239 94 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (375)
Q Consensus 94 ~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef 173 (375)
++++.--..|++.|.|+++.|+--|+.++++...... ..+.+..+..++.+.+.+++.+. +.+|- ++||.|.|.||
T Consensus 64 tpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h--~~ghep~Pl~sE~Ele~~iD~vL-~DdDf-N~DG~IDYgEf 139 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAH--DSGHEPVPLSSEAELERLIDAVL-DDDDF-NGDGVIDYGEF 139 (144)
T ss_pred CHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhh--hcCCCCCCCCCHHHHHHHHHHHh-ccccc-CCCceeeHHHH
Confidence 3444445589999999999999999999998866532 23334445556677777777653 33343 58999999999
Q ss_pred HHH
Q 017239 174 RSW 176 (375)
Q Consensus 174 ~~~ 176 (375)
.+-
T Consensus 140 lK~ 142 (144)
T KOG4065|consen 140 LKR 142 (144)
T ss_pred Hhh
Confidence 753
No 91
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.86 E-value=0.035 Score=37.01 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=23.7
Q ss_pred eeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHH
Q 017239 78 LTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 78 I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
++|.|....|..+.-.-.++-+..+|+.+|..++|.+..+|+..+.+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 45555555555444333455555566666666666666666555544
No 92
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.73 E-value=0.019 Score=34.13 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=19.4
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
+.+|+.+|.++ +|.|+++||..++.
T Consensus 3 ~~~F~~~D~d~-dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 3 REAFKMFDKDG-DGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHH-TTS-SSEEEHHHHHHHHH
T ss_pred HHHHHHHCCCC-CCcCcHHHHHHHHH
Confidence 56788888888 88888888888776
No 93
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=95.67 E-value=0.023 Score=55.68 Aligned_cols=66 Identities=21% Similarity=0.288 Sum_probs=56.4
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--------hhHHHHHHHHhcCCCCCcceeHHHHHHHH
Q 017239 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--------GALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (375)
Q Consensus 17 ~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (375)
.+.||.+|+..+++.|.+++ + ++|+++..++...|... ...++.+....+.+. +|+|+|++|+..+
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~---~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~-~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-D---QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDA-DGRVEFEEFVGIF 83 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-C---CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCc-CCccCHHHHHHHH
Confidence 45899999999999999999 4 68999999999887652 345678888888898 9999999999854
No 94
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.57 E-value=0.067 Score=47.51 Aligned_cols=134 Identities=18% Similarity=0.202 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--h------hHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCH
Q 017239 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--G------ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTK 95 (375)
Q Consensus 24 ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--~------~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~ 95 (375)
-.+.|...|.+.|.+ .+++|+..++++-.... . ....-.|++.|.++ ||.|+++||-.-+......+.
T Consensus 99 srrklmviFsKvDVN---tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdg-DGhvsWdEykvkFlaskghse 174 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVN---TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDG-DGHVSWDEYKVKFLASKGHSE 174 (362)
T ss_pred HHHHHHHHHhhcccC---ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCC-CCceehhhhhhHHHhhcCcch
Confidence 456788899999876 78999999998654432 1 22456788999999 999999999766554432222
Q ss_pred ----------------HHHHHHHHHhhcCCC-------CCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHH
Q 017239 96 ----------------DEIEEFIYQLLDVND-------DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 152 (375)
Q Consensus 96 ----------------~ekl~~~F~l~D~d~-------dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 152 (375)
+++-.+.=.+.|... |=.++.+|+..++.-- .+ -.....+++.|+.
T Consensus 175 kevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPE--------hS---rgmLrfmVkeivr 243 (362)
T KOG4251|consen 175 KEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPE--------HS---RGMLRFMVKEIVR 243 (362)
T ss_pred HHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChH--------hh---hhhHHHHHHHHHH
Confidence 122222222222211 1224445555544321 11 1223456777766
Q ss_pred hccccccCccCCCCCCCHHHHHHHHH
Q 017239 153 AATFSKNGERSSNKSMSFEDFRSWCT 178 (375)
Q Consensus 153 ~~~~~~~d~~~~dg~Is~~ef~~~~~ 178 (375)
.+ |+ ++|.++|..+|+....
T Consensus 244 dl-----Dq-dgDkqlSvpeFislpv 263 (362)
T KOG4251|consen 244 DL-----DQ-DGDKQLSVPEFISLPV 263 (362)
T ss_pred Hh-----cc-CCCeeecchhhhcCCC
Confidence 53 33 4888999999987543
No 95
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=95.44 E-value=0.2 Score=51.60 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (375)
.........+...|+..|++ .+|.++..+...++... ...+.++|+..+..+ ++++...+|.......+..
T Consensus 129 ~~~~~~~~wi~~~~~~ad~~---~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~-~~k~~~~~~~~~~~~~~~r 204 (746)
T KOG0169|consen 129 RQRSRREHWIHSIFQEADKN---KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQ-TGKLEEEEFVKFRKELTKR 204 (746)
T ss_pred hhcchHHHHHHHHHHHHccc---cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhc-cceehHHHHHHHHHhhccC
Confidence 34556667788889998887 78999998888776542 445788999888877 9999999999987766644
Q ss_pred CHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHH
Q 017239 94 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 173 (375)
Q Consensus 94 ~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef 173 (375)
. .+.++|..+-.+ .+.++.++|.+++...-+ ......+.+++|++..-..+. ....+.++++.|
T Consensus 205 p---ev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q~----------e~~~~~~~ae~ii~~~e~~k~--~~~~~~l~ldgF 268 (746)
T KOG0169|consen 205 P---EVYFLFVQYSHG-KEYLSTDDLLRFLEEEQG----------EDGATLDEAEEIIERYEPSKE--FRRHGLLSLDGF 268 (746)
T ss_pred c---hHHHHHHHHhCC-CCccCHHHHHHHHHHhcc----------cccccHHHHHHHHHHhhhhhh--ccccceecHHHH
Confidence 3 577888888765 889999999999987521 234445566666654311111 124567999999
Q ss_pred HHHHHh
Q 017239 174 RSWCTL 179 (375)
Q Consensus 174 ~~~~~~ 179 (375)
..++..
T Consensus 269 ~~yL~S 274 (746)
T KOG0169|consen 269 TRYLFS 274 (746)
T ss_pred HHHhcC
Confidence 999975
No 96
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.37 E-value=0.061 Score=47.76 Aligned_cols=115 Identities=14% Similarity=0.244 Sum_probs=78.8
Q ss_pred CCCCcCHHHHHhhhcCc------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc---CCC------HHHHHHHHHHhh
Q 017239 42 NGRYISPSIFQAYFGLK------GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE---KGT------KDEIEEFIYQLL 106 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~~------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~---~~~------~~ekl~~~F~l~ 106 (375)
.+-.++.++|..++-.. ..++..|...+|+++ |..++-.+|+....... .+. .+.+.+..=.++
T Consensus 212 adlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdg-DkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElI 290 (362)
T KOG4251|consen 212 ADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDG-DKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELI 290 (362)
T ss_pred hhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCC-CeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHh
Confidence 35578889999887542 345788999999999 99999999998653222 111 145667777889
Q ss_pred cCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHH
Q 017239 107 DVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (375)
Q Consensus 107 D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~ 175 (375)
|.|.||.+|.+||..++.-. .....-..++.++.-. |. +++..++.++...
T Consensus 291 DsNhDGivTaeELe~y~dP~------------n~~~alne~~~~ma~~-----d~-n~~~~Ls~eell~ 341 (362)
T KOG4251|consen 291 DSNHDGIVTAEELEDYVDPQ------------NFRLALNEVNDIMALT-----DA-NNDEKLSLEELLE 341 (362)
T ss_pred hcCCccceeHHHHHhhcCch------------hhhhhHHHHHHHHhhh-----cc-CCCcccCHHHHHH
Confidence 99999999999999886431 1111223444444321 22 3788999999854
No 97
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=95.25 E-value=0.051 Score=41.41 Aligned_cols=66 Identities=17% Similarity=0.317 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--hhHHHHHHHHhcCCCC--CcceeHHHHHHHHHhhcCCC
Q 017239 24 ELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLVTQKRN--DHKLTFEDLVVAKATYEKGT 94 (375)
Q Consensus 24 ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--~~~~~~lf~~~d~~~~--~g~I~f~eF~~~l~~~~~~~ 94 (375)
.=..+.+.|+.++. +|.|+.+.|..|.++. ..++..||+++...++ ...|+.+|+..+...+...+
T Consensus 28 ~W~~VE~RFd~La~-----dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD~s 97 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK-----DGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQISDQS 97 (100)
T ss_dssp -HHHHHHHHHHH-B-----TTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH---
T ss_pred CHHHHHHHHHHhCc-----CCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhccC
Confidence 35678899999986 5999999999999986 7899999999965442 56899999988877766443
No 98
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=94.74 E-value=0.16 Score=49.26 Aligned_cols=129 Identities=19% Similarity=0.322 Sum_probs=82.5
Q ss_pred HHHHHHhhhcCCCCCCcCHHHHHhhhcCc------------h--------hHHHHHHHHhcCCCCCcceeHHHHHHH---
Q 017239 30 SLFKSLAAQSQSNGRYISPSIFQAYFGLK------------G--------ALGERMFNLVTQKRNDHKLTFEDLVVA--- 86 (375)
Q Consensus 30 ~~F~~ld~~~~~~~g~i~~~ef~~~l~~~------------~--------~~~~~lf~~~d~~~~~g~I~f~eF~~~--- 86 (375)
+.+..++.. +.+.+...+|...+... + ..++|||-.++..+ .|.|+..+....
T Consensus 178 ~~v~~l~~~---~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~-tG~iti~el~~snll 253 (493)
T KOG2562|consen 178 QFVNLLIQA---GCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSR-TGRITIQELLRSNLL 253 (493)
T ss_pred HHHHHHhcc---CccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCcc-CCceeHHHHHHhHHH
Confidence 344555543 56788887777654321 1 12579999999999 999999987663
Q ss_pred --HHhhcCCCH-H--------HHHHHH---HHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHH
Q 017239 87 --KATYEKGTK-D--------EIEEFI---YQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 152 (375)
Q Consensus 87 --l~~~~~~~~-~--------ekl~~~---F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 152 (375)
|..++.... . +....+ |--+|.|.||.|++++|...-...+ +..+++.||+
T Consensus 254 ~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tl---------------t~~ivdRIFs 318 (493)
T KOG2562|consen 254 DALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTL---------------TERIVDRIFS 318 (493)
T ss_pred HHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhccch---------------hhHHHHHHHh
Confidence 333332111 1 122223 5556999999999999998664432 3457888888
Q ss_pred hccccccCccCCCCCCCHHHHHHHHHh
Q 017239 153 AATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 153 ~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
++- +.-....+|.++|++|..++.+
T Consensus 319 ~v~--r~~~~~~eGrmdykdFv~FilA 343 (493)
T KOG2562|consen 319 QVP--RGFTVKVEGRMDYKDFVDFILA 343 (493)
T ss_pred hcc--ccceeeecCcccHHHHHHHHHH
Confidence 321 1111136889999999999974
No 99
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=94.68 E-value=0.062 Score=35.85 Aligned_cols=44 Identities=9% Similarity=0.116 Sum_probs=34.3
Q ss_pred cCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 46 ISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 46 i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
++..|++.++... ...+..||+..|+++ +|.++.+||..++..+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~-~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQ-SGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSS-SSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccC-CCCccHHHHHHHHHHh
Confidence 5666777666542 567899999999999 9999999999987654
No 100
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.66 E-value=0.051 Score=30.42 Aligned_cols=27 Identities=19% Similarity=0.389 Sum_probs=18.9
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 99 EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 99 l~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
++.+|+.+|.+++|.|+.+|+..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 455677777777777777777776653
No 101
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=94.24 E-value=0.055 Score=43.03 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=41.6
Q ss_pred hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHH
Q 017239 59 GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLES 121 (375)
Q Consensus 59 ~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~ 121 (375)
...+.-.|..+|.|+ +|.|+-.|+..+...+ ...+.-++..|+.+|.|+||.||..|...
T Consensus 53 ~~~~~W~F~~LD~n~-d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNK-DGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHHH--T--SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhHhhhcCCC-CCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 556788899999998 9999999987765544 33455677788999999999999988754
No 102
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=94.09 E-value=0.028 Score=44.76 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=44.9
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC--c-hhHHHHHHHHhcCCCCCcceeHHHHHH
Q 017239 20 FAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL--K-GALGERMFNLVTQKRNDHKLTFEDLVV 85 (375)
Q Consensus 20 fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~--~-~~~~~~lf~~~d~~~~~g~I~f~eF~~ 85 (375)
........+.=.|..||.+ ++|.|+..|+..+... + ..=+..+++..|.|+ |+.|+..|+..
T Consensus 48 ~~~~~~~~~~W~F~~LD~n---~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~-d~~Is~~EW~~ 112 (113)
T PF10591_consen 48 SYSECKRVVHWKFCQLDRN---KDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNK-DGKISLDEWCN 112 (113)
T ss_dssp TGGGGHHHHHHHHHHH--T----SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT--SSSEEHHHHHH
T ss_pred chhhhhhhhhhhHhhhcCC---CCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCC-CCCCCHHHHcc
Confidence 3445566677789999997 7999999999988763 3 455789999999999 99999999864
No 103
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=94.07 E-value=0.74 Score=45.18 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=64.7
Q ss_pred CCCCcCHHHHHhh---hcCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCC------------------------
Q 017239 42 NGRYISPSIFQAY---FGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGT------------------------ 94 (375)
Q Consensus 42 ~~g~i~~~ef~~~---l~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~------------------------ 94 (375)
.||.|+.+||+.+ +..++.+-...|..||+.+ .|.++++++...+....-..
T Consensus 87 KDglisf~eF~afe~~lC~pDal~~~aFqlFDr~~-~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~n 165 (694)
T KOG0751|consen 87 KDGLISFQEFRAFESVLCAPDALFEVAFQLFDRLG-NGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLN 165 (694)
T ss_pred ccccccHHHHHHHHhhccCchHHHHHHHHHhcccC-CCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhcc
Confidence 5789999999854 3445677789999999998 99999999988876432100
Q ss_pred -----------HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Q 017239 95 -----------KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 126 (375)
Q Consensus 95 -----------~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~ 126 (375)
.+|..+.+|+..|..++|.||.-++..++..+
T Consensus 166 y~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~ 208 (694)
T KOG0751|consen 166 YAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMVTI 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhhhh
Confidence 12455668999999999999999998887664
No 104
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=93.78 E-value=0.31 Score=38.11 Aligned_cols=63 Identities=16% Similarity=0.265 Sum_probs=50.1
Q ss_pred HHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
-+.+|+.++. . +|.|+-++-..++.. .+-+.+.+..++.+-|.|++|.++.+||.-++.-+..
T Consensus 12 y~~~F~~l~~-~-~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~ 74 (104)
T PF12763_consen 12 YDQIFQSLDP-Q-DGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINR 74 (104)
T ss_dssp HHHHHHCTSS-S-TTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-C-CCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHH
Confidence 4678888874 5 899999999876553 3445788999999999999999999999988876533
No 105
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.85 E-value=0.19 Score=27.87 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=19.7
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKA 88 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~ 88 (375)
+++|+.+|.++ +|.|++.+|..++.
T Consensus 3 ~~~f~~~d~~~-~g~i~~~e~~~~~~ 27 (29)
T smart00054 3 KEAFRLFDKDG-DGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHCCCC-CCcEeHHHHHHHHH
Confidence 56788888887 88888888887765
No 106
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=88.36 E-value=2 Score=44.35 Aligned_cols=118 Identities=12% Similarity=0.221 Sum_probs=81.3
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhch-hhcccCCC
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSM-EISERGSN 141 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~-~~~~~~~~ 141 (375)
..+.+.+|..+ +|.|.--+|..++..+|+...+++++.+|++.-.++...+ ...|..++..++..---+ +-..-|..
T Consensus 473 N~llNvyD~~R-~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgs 550 (966)
T KOG4286|consen 473 NWLLNVYDTGR-TGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGS 550 (966)
T ss_pred HHHHHhcccCC-CcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCC
Confidence 57788999999 9999999999999999999999999999999986665554 667776666654431000 00011111
Q ss_pred chHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHhcchHHHHhhcc
Q 017239 142 SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGL 190 (375)
Q Consensus 142 ~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~l 190 (375)
..+--+..-|.. . .+.-.|++..|..|+...|...-++..+
T Consensus 551 NvepsvrsCF~~-----v---~~~pei~~~~f~dw~~~epqsmVwL~vl 591 (966)
T KOG4286|consen 551 NIEPSVRSCFQF-----V---NNKPEIEAALFLDWMRLEPQSMVWLPVL 591 (966)
T ss_pred CCChHHHHHHHh-----c---CCCCcchHHHHHHHhccCcchhhHHHHH
Confidence 122233333332 2 2456799999999999999877666554
No 107
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.03 E-value=0.98 Score=44.30 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc---hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK---GALGERMFNLVTQKRNDHKLTFEDLVVAKATYE 91 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~---~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~ 91 (375)
.+++++.++....|+.+-.+ ..|.|+=..-+.+|... -.....|+...|.++ ||.++..||+.++-...
T Consensus 224 ~IT~EQReYYvnQFrtvQpD---p~gfisGsaAknFFtKSklpi~ELshIWeLsD~d~-DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPD---PHGFISGSAAKNFFTKSKLPIEELSHIWELSDVDR-DGALTLSEFCAAFHLVV 295 (737)
T ss_pred ccCHHHHHHHHhhhhcccCC---cccccccHHHHhhhhhccCchHHHHHHHhhcccCc-cccccHHHHHhhHhhee
Confidence 57899999999999999887 78999977777777543 445778999999999 99999999999886554
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=85.29 E-value=1.5 Score=32.49 Aligned_cols=67 Identities=9% Similarity=0.173 Sum_probs=45.3
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCC-CchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 99 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGS-NSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 99 l~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
++.+|+.|.. +.+.||.++|.+.+... .++ ....+.+..++.+...+... ...+.+|++.|..|+
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~e-----------Q~~~~~~~~~~~~li~~~~~~~~~--~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREE-----------QGEPRLTDEQAKELIEKFEPDERN--RQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHT-----------SS-TTSSHHHHHHHHHHHHHHHHH--HCTTEEEHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHH-----------hccccCcHHHHHHHHHHHccchhh--cccCCcCHHHHHHHH
Confidence 5678888865 78889999999998752 222 33466677776652111110 145889999999999
Q ss_pred Hh
Q 017239 178 TL 179 (375)
Q Consensus 178 ~~ 179 (375)
..
T Consensus 68 ~S 69 (83)
T PF09279_consen 68 FS 69 (83)
T ss_dssp HS
T ss_pred CC
Confidence 75
No 109
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=85.16 E-value=1.7 Score=32.10 Aligned_cols=56 Identities=11% Similarity=0.320 Sum_probs=33.8
Q ss_pred HHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-------hhHHHHHHHHhcCC----CCCcceeHHHHHHHHH
Q 017239 28 LKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-------GALGERMFNLVTQK----RNDHKLTFEDLVVAKA 88 (375)
Q Consensus 28 l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-------~~~~~~lf~~~d~~----~~~g~I~f~eF~~~l~ 88 (375)
|..+|..++. +.+.|+.++|..+|... ...+.+|+..+..+ . .+.+++++|..+|.
T Consensus 2 i~~if~~ys~----~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~-~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS----DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQ-KGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT----TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHC-TTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcc-cCCcCHHHHHHHHC
Confidence 4556666654 35677777777777431 23455666655322 2 56777777777664
No 110
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=84.97 E-value=6.5 Score=39.87 Aligned_cols=107 Identities=17% Similarity=0.267 Sum_probs=70.5
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHH----hhhcCc--hhHHHHHHHHhcCCCC----CcceeHHHHHHH
Q 017239 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQ----AYFGLK--GALGERMFNLVTQKRN----DHKLTFEDLVVA 86 (375)
Q Consensus 17 ~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~----~~l~~~--~~~~~~lf~~~d~~~~----~g~I~f~eF~~~ 86 (375)
...+.+.-+..|.+.|+.-|.+ .+|.++-.|+. .+|+.+ ....+.+-...+..-. +..++...|+..
T Consensus 186 ~qelkp~~v~al~RIFki~D~d---~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL 262 (625)
T KOG1707|consen 186 EQELKPRCVKALKRIFKISDSD---NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFL 262 (625)
T ss_pred cccccHHHHHHHHHHHhhhccc---cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHH
Confidence 3367788899999999998887 78999977765 457665 2223322222221110 345566666654
Q ss_pred HHhhc-CCCH-----------------------------------------HHHHHHHHHhhcCCCCCccCHHHHHHHHH
Q 017239 87 KATYE-KGTK-----------------------------------------DEIEEFIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 87 l~~~~-~~~~-----------------------------------------~ekl~~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
-..+. ++.. -+.+..+|..||.|+||.++.+|+..+..
T Consensus 263 ~~lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~ 342 (625)
T KOG1707|consen 263 NTLFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFS 342 (625)
T ss_pred HHHHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhh
Confidence 44332 1111 24566789999999999999999999998
Q ss_pred HH
Q 017239 125 AM 126 (375)
Q Consensus 125 ~~ 126 (375)
.+
T Consensus 343 ~~ 344 (625)
T KOG1707|consen 343 TA 344 (625)
T ss_pred hC
Confidence 74
No 111
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=84.30 E-value=1.8 Score=48.10 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=74.2
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhcC-------CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhh
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEK-------GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEI 135 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~-------~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~ 135 (375)
.-+|+.||.+. +|.+++.+|-..|..+.. +.++-.++.+..+.|.+.+|+|+..|...+|..-
T Consensus 2256 s~~fkhFDkek-~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~--------- 2325 (2399)
T KOG0040|consen 2256 SMMFKHFDKEK-NGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK--------- 2325 (2399)
T ss_pred HHHHHHhchhh-ccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc---------
Confidence 47899999999 999999999998876652 2334489999999999999999999988877541
Q ss_pred cccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHhcchHHHHhhcccC
Q 017239 136 SERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLT 192 (375)
Q Consensus 136 ~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ll~ 192 (375)
...+.. +...|+..|+.+ +. +...|+.++...-+ .|.-+.|....+.
T Consensus 2326 ETeNI~-s~~eIE~AfraL--~a-----~~~yvtke~~~~~l--treqaefc~s~m~ 2372 (2399)
T KOG0040|consen 2326 ETENIL-SSEEIEDAFRAL--DA-----GKPYVTKEELYQNL--TREQAEFCMSKMK 2372 (2399)
T ss_pred cccccc-chHHHHHHHHHh--hc-----CCccccHHHHHhcC--CHHHHHHHHHHhh
Confidence 011122 334788888875 11 23456666653333 3444455444433
No 112
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=84.14 E-value=0.85 Score=42.45 Aligned_cols=64 Identities=11% Similarity=0.162 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-CCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 61 LGERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 61 ~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.+.--|..+|.|. ++.|+-.|+.-+-..+. ......-.+.+|+.+|.|+|..|+.+|++..|..
T Consensus 334 vv~w~F~qLdkN~-nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 334 VVHWYFNQLDKNS-NNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeeecccc-cCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 4556688999999 99999999888777666 4445667888999999999999999999988865
No 113
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=82.73 E-value=1.3 Score=40.83 Aligned_cols=74 Identities=19% Similarity=0.348 Sum_probs=45.6
Q ss_pred HHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHH--hccccccCccCCCCCCCHHHHHHHHHh
Q 017239 102 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN--AATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 102 ~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~--~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
.|.+.|.|+||+++..||..+++.-+.-+.+..+.... +.++.++.++ +..+...|. +.|-.||.++|..--.+
T Consensus 249 FF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDD---M~EmeEErlRMREHVMk~vDt-NqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 249 FFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDD---MKEMEEERLRMREHVMKQVDT-NQDRLVTLEEFLNDTDN 324 (442)
T ss_pred heeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchH---HHHHHHHHHHHHHHHHHhccc-chhhhhhHHHHHhhhhh
Confidence 58899999999999999999998766655443332222 2222222211 111222233 26778999999776553
No 114
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=82.70 E-value=4.2 Score=40.47 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=49.3
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
.++..|...| |++|+|+..|+..++...-.. .....++++++++... +. +.+|.|+|++|...+
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~---------~g~~~~eei~~~l~~~-----~~-~~~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLP---------LGYFVREEIKEILGEV-----GV-DADGRVEFEEFVGIF 83 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhccc---------ccchhHHHHHHHHhcc-----CC-CcCCccCHHHHHHHH
Confidence 3667899999 999999999999999874221 1234567888888764 22 367999999999965
Q ss_pred Hh
Q 017239 178 TL 179 (375)
Q Consensus 178 ~~ 179 (375)
..
T Consensus 84 ~~ 85 (627)
T KOG0046|consen 84 LN 85 (627)
T ss_pred Hh
Confidence 53
No 115
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.12 E-value=2.9 Score=32.90 Aligned_cols=58 Identities=17% Similarity=0.232 Sum_probs=42.4
Q ss_pred HHHHHhcCCCCCcceeHHHHHHHHHhhcC----C------CHHHH----HHHHHHhhcCCCCCccCHHHHHHH
Q 017239 64 RMFNLVTQKRNDHKLTFEDLVVAKATYEK----G------TKDEI----EEFIYQLLDVNDDGVLGRSDLESV 122 (375)
Q Consensus 64 ~lf~~~d~~~~~g~I~f~eF~~~l~~~~~----~------~~~ek----l~~~F~l~D~d~dG~Is~~El~~~ 122 (375)
..|+..|-++ ++.||--|++.+++.... + ..+.. +..+.+--|.|+||+|++-|+.+.
T Consensus 71 HYF~MHDldk-nn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDK-NNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCc-CCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 5677778898 999999999999987753 1 11222 333455558899999999998763
No 116
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.71 E-value=4.8 Score=42.09 Aligned_cols=91 Identities=12% Similarity=0.280 Sum_probs=66.5
Q ss_pred CcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhc
Q 017239 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 154 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~ 154 (375)
++ |+++||. +...+.+.+++..|.++|. .+|.++.+++..++..++.... .........+....++.++
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 70 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW----LSLIKKQTEEYAALIMEEL 70 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh----hhhhhhhhhHHHHHhhhhc
Confidence 56 9999998 5577889999999999998 8999999999999988766532 1122333344455555543
Q ss_pred cccccCccCCCCCCCHHHHHHHHHhcch
Q 017239 155 TFSKNGERSSNKSMSFEDFRSWCTLIPS 182 (375)
Q Consensus 155 ~~~~~d~~~~dg~Is~~ef~~~~~~~p~ 182 (375)
+. ++.+.+..+++...+...|.
T Consensus 71 -----~~-~~~~y~~~~~~~~ll~~~~~ 92 (646)
T KOG0039|consen 71 -----DP-DHKGYITNEDLEILLLQIPT 92 (646)
T ss_pred -----cc-cccceeeecchhHHHHhchH
Confidence 33 25568999999888887774
No 117
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=78.07 E-value=5.6 Score=41.43 Aligned_cols=66 Identities=15% Similarity=0.338 Sum_probs=55.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhh---cCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYF---GLKGALGERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l---~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
..+.+|..+..+.|..|.. ..|.|+-..=+.+| +++.+....|+..-|.|. ||++|..||-.+|..
T Consensus 9 avT~~Er~K~~~qF~~Lkp----~~gfitg~qArnfflqS~LP~~VLaqIWALsDldk-DGrmdi~EfSIAmkL 77 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKP----GQGFITGDQARNFFLQSGLPTPVLAQIWALSDLDK-DGRMDIREFSIAMKL 77 (1118)
T ss_pred ccchHHHHHHHHHHhccCC----CCCccchHhhhhhHHhcCCChHHHHHHHHhhhcCc-cccchHHHHHHHHHH
Confidence 3688999999999999976 57999988877765 345778889999999999 999999999888764
No 118
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=77.83 E-value=6 Score=33.23 Aligned_cols=62 Identities=26% Similarity=0.339 Sum_probs=36.2
Q ss_pred HHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--------hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 28 LKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--------GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 28 l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--------~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
|.++|..++.-.......|+-..|..++... ...++-+|..+...+ ..+|+|++|+.+|..+
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~-~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKG-ARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS--SEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCC-CcccCHHHHHHHHHHH
Confidence 3456666653211134567777777665431 334677777765555 6678888888777644
No 119
>PLN02952 phosphoinositide phospholipase C
Probab=75.43 E-value=18 Score=37.27 Aligned_cols=92 Identities=7% Similarity=0.166 Sum_probs=58.5
Q ss_pred CcceeHHHHHHHHHhhcC--CCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCC-CchHHHHHHHH
Q 017239 75 DHKLTFEDLVVAKATYEK--GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGS-NSHQDIVDVFL 151 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~--~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~-~~~~~~i~~i~ 151 (375)
.|.++|++|.++...+.. ..+...++.+|..|..++ +.++.++|.+++... .++ ....+.+..|+
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~-----------Q~e~~~~~~~~~~i~ 81 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLH-----------QDELDCTLAEAQRIV 81 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHh-----------CCCcCCCHHHHHHHH
Confidence 578999999888777752 235677888999996544 679999999998763 121 12333444443
Q ss_pred Hhccc--cccCccCCCCCCCHHHHHHHHHh
Q 017239 152 NAATF--SKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 152 ~~~~~--~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
.+..- ..... .+...++++.|..|+..
T Consensus 82 ~~~~~~~~~~~~-~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 82 EEVINRRHHVTR-YTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHHHhhcccccc-ccccCcCHHHHHHHHcC
Confidence 32100 00000 12346999999999974
No 120
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=74.66 E-value=7.4 Score=36.70 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=68.7
Q ss_pred CCHHHHH----HHHHHHHHHhhhcCCCCCCcCHHHHHhh---hcC----c-hhHHHHHHHHhcCCCCCcceeHHHHHHHH
Q 017239 20 FAQHELE----DLKSLFKSLAAQSQSNGRYISPSIFQAY---FGL----K-GALGERMFNLVTQKRNDHKLTFEDLVVAK 87 (375)
Q Consensus 20 fs~~ei~----~l~~~F~~ld~~~~~~~g~i~~~ef~~~---l~~----~-~~~~~~lf~~~d~~~~~g~I~f~eF~~~l 87 (375)
=+..|+. +|++=|+.+-.+ .++......+... |.- . ...+--+|+.+|.|. |+.++-.|+..+
T Consensus 201 Ct~qeL~~lg~RL~dWF~~lhe~---s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~-Dl~Ld~sEl~~I- 275 (434)
T KOG3555|consen 201 CTDQELRRLGNRLRDWFKALHED---SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNY-DLLLDQSELRAI- 275 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhh---hhccCcchhhcccccccccccCcchhhhhhhhhhcccccc-ccccCHHHhhhh-
Confidence 4666766 556667777544 2233333323222 222 1 445779999999999 999999997643
Q ss_pred HhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 88 ATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 88 ~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.....|.-++-.|..+|...||.|+..|.-..+..
T Consensus 276 ---~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 276 ---ELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred ---hccCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 34556888999999999999999999998877653
No 121
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=73.10 E-value=5.8 Score=37.39 Aligned_cols=62 Identities=18% Similarity=0.330 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHH
Q 017239 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (375)
Q Consensus 96 ~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~ 175 (375)
...+.++|..+|.|.|+.++..||+.+-.. ..+.-|+.+|+.. |.. .||.||-.||..
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~ld----------------knE~CikpFfnsC--D~~----kDg~iS~~EWC~ 306 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIELD----------------KNEACIKPFFNSC--DTY----KDGSISTNEWCY 306 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhcc----------------CchhHHHHHHhhh--ccc----ccCccccchhhh
Confidence 566899999999999999999999876532 1345688888875 222 689999999988
Q ss_pred HHHh
Q 017239 176 WCTL 179 (375)
Q Consensus 176 ~~~~ 179 (375)
-+.+
T Consensus 307 CF~k 310 (434)
T KOG3555|consen 307 CFQK 310 (434)
T ss_pred hhcc
Confidence 7765
No 122
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=72.56 E-value=74 Score=34.22 Aligned_cols=129 Identities=10% Similarity=0.033 Sum_probs=82.1
Q ss_pred CCCCcCHHHHHhhhcCchhHHHHHHHHhcC-----CC----CCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCC
Q 017239 42 NGRYISPSIFQAYFGLKGALGERMFNLVTQ-----KR----NDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDG 112 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~-----~~----~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG 112 (375)
..|+|....+...|....+- .++..+++. ++ .-...+++.|...+..+|.. ..+..+|..+..+..-
T Consensus 161 ~~grip~knI~k~F~~~k~~-KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR---~eie~iF~ki~~~~kp 236 (1189)
T KOG1265|consen 161 FEGRIPVKNIIKTFSADKKE-KRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCPR---PEIEEIFRKISGKKKP 236 (1189)
T ss_pred ccccccHHHHHHHhhcCCch-hHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCCc---hhHHHHHHHhccCCCc
Confidence 46788888887777765322 455554431 11 01235677777777777743 3578899999988889
Q ss_pred ccCHHHHHHHHHHHHHHHhchh-hcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 113 VLGRSDLESVVIAMLEIIFSME-ISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 113 ~Is~~El~~~l~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
++|.++|...+..--+ +.+ +.-.-.....+.+..|+...-. +.....+|+|+.+-|.+++..
T Consensus 237 ylT~~ql~dfln~~Qr---DpRLNeilfp~~~~~r~~~liekyEp--~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 237 YLTKEQLVDFLNKKQR---DPRLNEILFPPADPRRIQSLIEKYEP--NSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred cccHHHHHHHHhhhcc---CcchhhhhcCCCCHHHHHHHHHHcCC--chhhhhccccchhhhHHHhhC
Confidence 9999999999865210 000 0001244456778888886422 211235799999999999986
No 123
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=72.52 E-value=6.9 Score=39.48 Aligned_cols=74 Identities=8% Similarity=0.095 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-----hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-----GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG 93 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-----~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~ 93 (375)
.++++++...+.+|..+|.+ ..+.++..+....|+.. ....+++....|.+- .|.+..+||+..++....+
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~---k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~-~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDAD---KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENL-NGFVELREFLQLMSAIKNG 661 (680)
T ss_pred ccCHHHHHHHHHHHHhhcch---HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-cceeeHHHHHHHHHHHhcC
Confidence 68999999999999999886 56888888777776543 344566667777777 8899999999988877766
Q ss_pred CHH
Q 017239 94 TKD 96 (375)
Q Consensus 94 ~~~ 96 (375)
..+
T Consensus 662 ~~~ 664 (680)
T KOG0042|consen 662 CTE 664 (680)
T ss_pred ChH
Confidence 543
No 124
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=72.21 E-value=8.1 Score=36.22 Aligned_cols=95 Identities=9% Similarity=-0.003 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHhhhc---Cc---hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHH
Q 017239 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFG---LK---GALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIE 99 (375)
Q Consensus 26 ~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~---~~---~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl 99 (375)
..+...|..+|.. .+|.++..+-...+. .+ ...++--|+.|+..- ||.+.-.+|-..+... .+-.+-++
T Consensus 259 d~l~~~f~LFde~---~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~e-Dg~~ge~~ls~ilq~~-lgv~~l~v 333 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG---TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAE-DGISGEHILSLILQVV-LGVEVLRV 333 (412)
T ss_pred hhhhhhhheecCC---CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhccccc-ccccchHHHHHHHHHh-cCcceeec
Confidence 5677788888765 688888765543332 22 567889999999988 9999888877766533 23334457
Q ss_pred HHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 100 EFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 100 ~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
--+|+.++...+|+|+.++++++...
T Consensus 334 ~~lf~~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 334 PVLFPSIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred cccchhhhcccCcceeHHHHHHHHHh
Confidence 77899999999999999999998865
No 125
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=70.93 E-value=32 Score=36.04 Aligned_cols=65 Identities=8% Similarity=0.172 Sum_probs=55.7
Q ss_pred hHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 60 ALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 60 ~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.++..+|+..|++. +|.+++.+-+.++..+...-.+.+++.+|+-.|.-+++.+..+++.++...
T Consensus 136 ~wi~~~~~~ad~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~ 200 (746)
T KOG0169|consen 136 HWIHSIFQEADKNK-NGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKE 200 (746)
T ss_pred HHHHHHHHHHcccc-ccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHh
Confidence 45678999999999 999999999999887776666888999999998888999999988887654
No 126
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=70.21 E-value=27 Score=37.52 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=73.7
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc-------hhHHHHHHHHh---cCCCCCcceeHHHHHHH
Q 017239 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK-------GALGERMFNLV---TQKRNDHKLTFEDLVVA 86 (375)
Q Consensus 17 ~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~-------~~~~~~lf~~~---d~~~~~g~I~f~eF~~~ 86 (375)
....++..+.++...|...+.. ..+.++.++|..++-.. ....+.+|..+ |.+. -|.++|.+|...
T Consensus 738 sk~~sQ~v~~ElrAle~~~~~~---d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~-~~qv~~~e~~dd 813 (890)
T KOG0035|consen 738 SKGTSQYVLDELRALENEQDKI---DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLI-QGQVQLLEFEDD 813 (890)
T ss_pred ccchhHHHHHHHHHHHhHHHHh---hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCccc-ccceeHHHHHhH
Confidence 3356777888888888888775 56889999999886442 23455666555 4444 588999999999
Q ss_pred HHh-hcCCCHHHHHHHHHHhhcCCCCCccCHHHHHH
Q 017239 87 KAT-YEKGTKDEIEEFIYQLLDVNDDGVLGRSDLES 121 (375)
Q Consensus 87 l~~-~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~ 121 (375)
|.. +...+.+.++..+|+..-.+.. +|..+||..
T Consensus 814 l~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 814 LEREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hhhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 975 4466778889999998876544 678888776
No 127
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=69.51 E-value=13 Score=30.13 Aligned_cols=30 Identities=13% Similarity=0.308 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 96 ~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
+--+.++..+||.+++|.|+.-+++..+..
T Consensus 96 ~L~ln~Ll~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 96 DLLLNWLLNVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHHHHHHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeeehhHHHHHHHH
Confidence 335788899999999999998888876653
No 128
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=66.90 E-value=6.5 Score=28.17 Aligned_cols=54 Identities=13% Similarity=0.216 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCC------CCcceeHHHHHH
Q 017239 26 EDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKR------NDHKLTFEDLVV 85 (375)
Q Consensus 26 ~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~------~~g~I~f~eF~~ 85 (375)
+++.+.|+.++. +++.|+.++|...|... .++-+...|..-. ..|.+||..|+.
T Consensus 6 eqv~~aFr~lA~----~KpyVT~~dLr~~l~pe--~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRALAG----GKPYVTEEDLRRSLTPE--QAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHHCT----SSSCEEHHHHHHHS-CC--CHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHHHc----CCCcccHHHHHHHcCcH--HHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 568889999955 57899999999887632 2244444443211 147799998875
No 129
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=62.54 E-value=5.4 Score=37.31 Aligned_cols=69 Identities=13% Similarity=0.292 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHH
Q 017239 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 175 (375)
Q Consensus 96 ~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~ 175 (375)
+..+++.|..+|.|.++.|.+.|.+-+=.-+.. -..+.+-...+++- -|. ++|..||++||+.
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k-----------~s~~rkC~rk~~~y-----CDl-NkDKkISl~Ew~~ 394 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLK-----------KSKPRKCSRKFFKY-----CDL-NKDKKISLDEWRG 394 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHh-----------hccHHHHhhhcchh-----ccc-CCCceecHHHHhh
Confidence 346889999999999999999997554333221 12244555565553 244 3889999999988
Q ss_pred HHHhcc
Q 017239 176 WCTLIP 181 (375)
Q Consensus 176 ~~~~~p 181 (375)
-+...+
T Consensus 395 CL~~~~ 400 (421)
T KOG4578|consen 395 CLGVEK 400 (421)
T ss_pred hhcccc
Confidence 776543
No 130
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=57.06 E-value=29 Score=32.81 Aligned_cols=111 Identities=12% Similarity=0.170 Sum_probs=73.3
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCc
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNS 142 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~ 142 (375)
..+..++|..+ .|.++--.--.+++.+|.+...++++.+|.+.. |.+|.+..-.+.+++..++..- -..........
T Consensus 113 aflLaA~ds~~-~g~~~vfavkialatlc~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evlslp-T~v~e~psfg~ 189 (434)
T KOG4301|consen 113 AFLLAAEDSEG-QGKQQVFAVKIALATLCGGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSLP-TAVFEGPSFGY 189 (434)
T ss_pred HHHHhhcCccC-CCCceeecchhhhhhhccchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcCC-chhhcCCCcch
Confidence 45566778888 899988888888999999999999999999987 4677777666666666654320 00000122222
Q ss_pred hHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHhcc--hHHHHh
Q 017239 143 HQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIP--SARKFL 187 (375)
Q Consensus 143 ~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p--~~~~~l 187 (375)
++..++. +|. .+.+++++.|.+-++..| ....++
T Consensus 190 te~~a~~-----cf~------qqrKv~Ln~fldtl~sdp~p~cl~wl 225 (434)
T KOG4301|consen 190 TELSARL-----CFL------QQRKVELNQFLDTLMSDPPPQCLVWL 225 (434)
T ss_pred HHHHHHH-----HHH------HHHHHHHHHHHHHHhcCCCchhHHHH
Confidence 3333433 332 345799999999998754 444443
No 131
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=55.23 E-value=23 Score=22.83 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC
Q 017239 23 HELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL 57 (375)
Q Consensus 23 ~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~ 57 (375)
.-+..+..+|.+++.. .++...+++.||+.++..
T Consensus 3 ~ai~~iI~vFhkYa~~-~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 3 KAIETIIDVFHKYAGK-EGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHHHTS-SSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-CCCCCeEcHHHHHHHHHH
Confidence 4577888999999864 224569999999988764
No 132
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=53.67 E-value=32 Score=28.29 Aligned_cols=36 Identities=8% Similarity=0.265 Sum_probs=24.9
Q ss_pred CcceeHHHHHHHHHhhc-CCCHHHHHHHHHHhhcCCC
Q 017239 75 DHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVND 110 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~-~~~~~ekl~~~F~l~D~d~ 110 (375)
.+.|+|+.|..+|..+. ...+++-.+.+|..|-...
T Consensus 46 ~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 46 EEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp TTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred CCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 66899999999998876 3466889999999997544
No 133
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=52.75 E-value=17 Score=19.49 Aligned_cols=18 Identities=39% Similarity=0.482 Sum_probs=12.4
Q ss_pred cCCCCCccCHHHHHHHHH
Q 017239 107 DVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 107 D~d~dG~Is~~El~~~l~ 124 (375)
|.|+||.|+.-++..+-+
T Consensus 1 DvN~DG~vna~D~~~lk~ 18 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALLKK 18 (21)
T ss_dssp -TTSSSSSSHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHH
Confidence 568888888887765543
No 134
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=52.58 E-value=22 Score=36.22 Aligned_cols=91 Identities=12% Similarity=0.144 Sum_probs=64.0
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--hhHHHHHHHHh-cCCCCCcceeHHHHHHHHHhhcC
Q 017239 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--GALGERMFNLV-TQKRNDHKLTFEDLVVAKATYEK 92 (375)
Q Consensus 16 ~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--~~~~~~lf~~~-d~~~~~g~I~f~eF~~~l~~~~~ 92 (375)
..+.+++.-++.|...|.++|.+ +||.++.+||..+|... .+++...+.-- -.+. .|.+++..|+...+.+..
T Consensus 305 ~s~ELs~~~~~Fl~~~f~~~D~d---~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~~~~-~G~ltl~g~l~~WsL~Tl 380 (625)
T KOG1707|consen 305 QSVELSPKGYRFLVDVFEKFDRD---NDGALSPEELKDLFSTAPGSPWTSSPYKDSTVKNE-RGWLTLNGFLSQWSLMTL 380 (625)
T ss_pred cceeccHHHHHHHHHHHHhccCC---CCCCcCHHHHHHHhhhCCCCCCCCCcccccceecc-cceeehhhHHHHHHHHhh
Confidence 45578999999999999999998 89999999999988763 44433222211 1123 789999999998887764
Q ss_pred CCH-HHHHHHHHHhhcCCC
Q 017239 93 GTK-DEIEEFIYQLLDVND 110 (375)
Q Consensus 93 ~~~-~ekl~~~F~l~D~d~ 110 (375)
-+. ..-...+|--|..+.
T Consensus 381 ld~~~t~~~L~Ylgf~~~~ 399 (625)
T KOG1707|consen 381 LDPRRTLEYLAYLGFPTDA 399 (625)
T ss_pred ccHHHHHHHHHhcCCcccc
Confidence 443 333344566666553
No 135
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=51.70 E-value=14 Score=26.55 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHH
Q 017239 95 KDEIEEFIYQLLDVNDDGVLGRSDLESVVI 124 (375)
Q Consensus 95 ~~ekl~~~F~l~D~d~dG~Is~~El~~~l~ 124 (375)
..+.+..+|+.+ .++.++||.+||++.+.
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLT 32 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcC
Confidence 457788899999 77889999999998763
No 136
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=50.85 E-value=61 Score=24.67 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=46.0
Q ss_pred CCCcCHHHHHhh-------hcCchhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhc-CCCHHHHHHHHHHhhcCCCCCcc
Q 017239 43 GRYISPSIFQAY-------FGLKGALGERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVL 114 (375)
Q Consensus 43 ~g~i~~~ef~~~-------l~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~~ekl~~~F~l~D~d~dG~I 114 (375)
||.++.+|...+ ++.+....+++...+.... ....++.+|...+...+ .......++.++++-- .||.+
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~--ADG~~ 89 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALE-EEAPDLYEFTSLIKEHFDYEERLELVEALWEVAY--ADGEL 89 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--hcCCC
Confidence 455555544322 2333445667777776655 56688999988876544 2222445556666655 45888
Q ss_pred CHHHHHHHH
Q 017239 115 GRSDLESVV 123 (375)
Q Consensus 115 s~~El~~~l 123 (375)
+..|-.-+-
T Consensus 90 ~~~E~~~l~ 98 (104)
T cd07313 90 DEYEEHLIR 98 (104)
T ss_pred CHHHHHHHH
Confidence 888865443
No 137
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=50.04 E-value=22 Score=25.51 Aligned_cols=51 Identities=8% Similarity=0.066 Sum_probs=36.9
Q ss_pred CcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 75 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 75 ~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
+.-|.|..++.+++.... ..++..+...|+.=..+.|+++||.+.+..+.+
T Consensus 6 sp~~~F~~L~~~l~~~l~---~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHLP---PSKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 456788888888776553 345556666665556789999999999988654
No 138
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=46.65 E-value=43 Score=26.09 Aligned_cols=68 Identities=13% Similarity=0.188 Sum_probs=40.6
Q ss_pred HhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 104 QLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 104 ~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
++||.+.+.+||.+++.+++.. +..+...+...++..+....-.|+-+. +. .+...++.+-..+.+..
T Consensus 10 RLYDT~tS~YITLedi~~lV~~--g~~f~V~DakTgeDiT~~iL~QII~E~---E~---~g~~~lp~~~L~qlIr~ 77 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVRE--GREFQVVDSKSGDDLTRSILLQIIAEE---ES---GGEPVLSTDFLTQIIRF 77 (107)
T ss_pred cccCCCccceeeHHHHHHHHHC--CCeEEEEECCCCchhHHHHHHHHHHHH---Hh---CCCCCCCHHHHHHHHHH
Confidence 5789989999999999998865 111222233345555555555544432 11 14456777766666664
No 139
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=46.15 E-value=23 Score=37.18 Aligned_cols=64 Identities=19% Similarity=0.299 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc---hhHHHHHHHHhcCCCCCcceeHHHHHHHHHhh
Q 017239 23 HELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK---GALGERMFNLVTQKRNDHKLTFEDLVVAKATY 90 (375)
Q Consensus 23 ~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~---~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~ 90 (375)
....+..++|..+|+. .+|+++-..=+.+|... ......|+..-|.|+ ||+++-+||+.+|-.+
T Consensus 192 ~~klKY~QlFNa~Dkt---rsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~LsDvd~-DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 192 HNKLKYRQLFNALDKT---RSGYLSGQQARSALGQSGLPQNQLAHIWTLSDVDG-DGKLSADEFILAMHLI 258 (1118)
T ss_pred hhhhHHHHHhhhcccc---cccccccHHHHHHHHhcCCchhhHhhheeeeccCC-CCcccHHHHHHHHHHH
Confidence 3445778899999986 68999988878777653 445678888899999 9999999999886543
No 140
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=44.12 E-value=76 Score=27.15 Aligned_cols=61 Identities=20% Similarity=0.267 Sum_probs=41.4
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhc-CCCH----HHH--HHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYE-KGTK----DEI--EEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~-~~~~----~ek--l~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
+.||..++..+ .+.+++.|...++..-. ..++ ... ...+|.+. .+.+|.+.+++++.+..-
T Consensus 99 e~iF~kya~~~-~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 99 EEIFSKYAKTG-PDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred HHHHHHhCCCC-CCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcch
Confidence 68888888776 77899999988876533 2222 223 33345444 457899999999987754
No 141
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=43.43 E-value=63 Score=36.52 Aligned_cols=59 Identities=19% Similarity=0.381 Sum_probs=42.7
Q ss_pred HHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 102 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 102 ~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
.|+-||.|+.|.|++.++.+.+.. ....+..+++-++... +. |.+...+|++|.+-+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~-------------~k~ytqse~dfllsca---e~---dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEG-------------HKHYTQSEIDFLLSCA---EA---DENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhc-------------cccchhHHHHHHHHhh---cc---CccccccHHHHHHHhcC
Confidence 488889999999999999998865 1234556777777753 22 24467899999876653
No 142
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=42.39 E-value=95 Score=25.05 Aligned_cols=52 Identities=21% Similarity=0.217 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCC
Q 017239 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKR 73 (375)
Q Consensus 18 t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~ 73 (375)
..||++|.++|...--.+... +|.+|..++....+.+-..+.+.++.+-..+
T Consensus 3 ~~~T~eer~eLk~rIvElVRe----~GRiTi~ql~~~TGasR~Tvk~~lreLVa~G 54 (127)
T PF06163_consen 3 RVFTPEEREELKARIVELVRE----HGRITIKQLVAKTGASRNTVKRYLRELVARG 54 (127)
T ss_pred CcCCHHHHHHHHHHHHHHHHH----cCCccHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 379999999999999888874 7999999999999998777777777664433
No 143
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=39.19 E-value=59 Score=23.55 Aligned_cols=48 Identities=4% Similarity=-0.029 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhc
Q 017239 18 RSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVT 70 (375)
Q Consensus 18 t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d 70 (375)
.+.+.++.......|...-. .|++.-++|..+++..++..+.|=+.+.
T Consensus 8 ~G~s~e~~~~~~~ql~Q~~~-----~Gkv~~ee~n~~~e~~p~~~~~lAk~~G 55 (75)
T TIGR02675 8 SGASAEEADGALIQLSQMLA-----SGKLRGEEINSLLEALPGALQALAKAMG 55 (75)
T ss_pred hCCCHHHHHHHHHHHHHHHH-----cCcccHHHHHHHHHHhHHHHHHHHHHhC
Confidence 36789999999999977654 5999999999998655556666665553
No 144
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=38.41 E-value=63 Score=24.90 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=39.3
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHH
Q 017239 98 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 177 (375)
Q Consensus 98 kl~~~F~l~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~ 177 (375)
.++.=|..+.. ||+|.+.+|-++|-+ ..+++.+.++|+.+..-+. .....|+.+|+..+-
T Consensus 31 ~VE~RFd~La~--dG~L~rs~Fg~CIGM---------------~dSkeFA~eLFdALaRrr~---i~~~~I~k~eL~efW 90 (100)
T PF08414_consen 31 EVEKRFDKLAK--DGLLPRSDFGECIGM---------------KDSKEFAGELFDALARRRG---IKGDSITKDELKEFW 90 (100)
T ss_dssp HHHHHHHHH-B--TTBEEGGGHHHHHT-----------------S-HHHHHHHHHHHHHHTT-----SSEE-HHHHHHHH
T ss_pred HHHHHHHHhCc--CCcccHHHHHHhcCC---------------cccHHHHHHHHHHHHHhcC---CccCCcCHHHHHHHH
Confidence 34455777765 799999999987732 3566788888887643332 235679999998876
Q ss_pred Hh
Q 017239 178 TL 179 (375)
Q Consensus 178 ~~ 179 (375)
..
T Consensus 91 ~q 92 (100)
T PF08414_consen 91 EQ 92 (100)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 145
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=38.22 E-value=27 Score=24.52 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=19.1
Q ss_pred HhhcCCCCCccCHHHHHHHHHH
Q 017239 104 QLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 104 ~l~D~d~dG~Is~~El~~~l~~ 125 (375)
++||...+.+||.+++.+++..
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~ 31 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVRE 31 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHC
Confidence 5789999999999999998865
No 146
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=31.90 E-value=1.2e+02 Score=22.37 Aligned_cols=49 Identities=10% Similarity=0.188 Sum_probs=31.5
Q ss_pred cCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcC---chhHHHHHHHHhcC
Q 017239 17 SRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGL---KGALGERMFNLVTQ 71 (375)
Q Consensus 17 ~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~---~~~~~~~lf~~~d~ 71 (375)
..+|+++++..++++|+.+-.. ..+.++-..-+.. ..+.++.+.+.+..
T Consensus 25 R~Gfs~~~i~~l~~ayr~l~~~------~~~~~~a~~~l~~~~~~~~~v~~~~~Fi~~ 76 (83)
T PF13720_consen 25 RRGFSKEEISALRRAYRILFRS------GLTLEEALEELEEEYPDSPEVREIVDFIRN 76 (83)
T ss_dssp HTTS-HHHHHHHHHHHHHHHTS------SS-HHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHhccCCHHHHHHHHHHHh
Confidence 3489999999999999998652 2454444433322 26677777777653
No 147
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=30.73 E-value=65 Score=36.39 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=34.4
Q ss_pred CCCCcCHHHHHhhhcCc----hhHHHHHHHHhcCCCCCcceeHHHHHHH
Q 017239 42 NGRYISPSIFQAYFGLK----GALGERMFNLVTQKRNDHKLTFEDLVVA 86 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~~----~~~~~~lf~~~d~~~~~g~I~f~eF~~~ 86 (375)
+.|.|++.+|..++... ...++.+......+. +...+|++|+.-
T Consensus 4070 gkgiiskkdf~kame~~k~ytqse~dfllscae~de-nd~~~y~dfv~r 4117 (5019)
T KOG2243|consen 4070 GKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEADE-NDMFDYEDFVDR 4117 (5019)
T ss_pred CCccccHHHHHHHHhccccchhHHHHHHHHhhccCc-cccccHHHHHHH
Confidence 67899999999998764 334667777666676 778999999874
No 148
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=29.56 E-value=86 Score=26.81 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Q 017239 96 DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 125 (375)
Q Consensus 96 ~ekl~~~F~l~D~d~dG~Is~~El~~~l~~ 125 (375)
.++.+.+|..|+..+.+.+|..|+.+|++.
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 578999999999988899999999999976
No 149
>PF04783 DUF630: Protein of unknown function (DUF630); InterPro: IPR006868 This region is sometimes found at the N terminus of putative plant bZIP proteins IPR006867 from INTERPRO. The function of this conserved region is not known.
Probab=28.98 E-value=45 Score=23.15 Aligned_cols=16 Identities=38% Similarity=0.322 Sum_probs=11.9
Q ss_pred CCCCCCCCCCcccccc
Q 017239 1 MGNSQPPPANPRFVSA 16 (375)
Q Consensus 1 MG~~~s~~~~~~l~~~ 16 (375)
||+..|++.+++.+..
T Consensus 1 MGC~~SK~d~eeaV~~ 16 (60)
T PF04783_consen 1 MGCSQSKLDDEEAVSL 16 (60)
T ss_pred CCCCcccccCcHHHHH
Confidence 9999999976655333
No 150
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=27.35 E-value=2.7e+02 Score=20.92 Aligned_cols=58 Identities=17% Similarity=0.303 Sum_probs=33.9
Q ss_pred HHHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHH---HHHHHHHhhcCCCCCccCHHHHHHH
Q 017239 62 GERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDE---IEEFIYQLLDVNDDGVLGRSDLESV 122 (375)
Q Consensus 62 ~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~e---kl~~~F~l~D~d~dG~Is~~El~~~ 122 (375)
..++...+..-. ....++.+|...+....+.+++. .++.++.+-- .||.++..|-.-+
T Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~r~~~l~~l~~vA~--ADG~~~~~E~~~l 98 (106)
T cd07316 38 RREAIRLFNEGK-ESDFGLEEYARQFRRACGGRPELLLQLLEFLFQIAY--ADGELSEAERELL 98 (106)
T ss_pred HHHHHHHHHHhC-cCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HcCCCCHHHHHHH
Confidence 344555554333 33377888888877654444443 4455555554 3588888886543
No 151
>smart00549 TAFH TAF homology. Domain in Drosophila nervy, CBFA2T1, human TAF105, human TAF130, and Drosophila TAF110. Also known as nervy homology region 1 (NHR1).
Probab=26.00 E-value=2.7e+02 Score=21.11 Aligned_cols=48 Identities=10% Similarity=0.161 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHh
Q 017239 118 DLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 179 (375)
Q Consensus 118 El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~ 179 (375)
-+++++.+++.... +.+.+.+.+.|..++..+ -+|.|+.|||..-++.
T Consensus 4 K~k~FL~tLi~ls~-----~~~qpe~~~~Vr~LV~~L---------~~~~i~~EeF~~~Lq~ 51 (92)
T smart00549 4 KCKRFLTTLIQLSN-----DISQPEVAERVRTLVLGL---------VNGTITAEEFTSRLQE 51 (92)
T ss_pred HHHHHHHHHHHHhc-----CCCcchHHHHHHHHHHHH---------HhCCCCHHHHHHHHHH
Confidence 45666666655421 122255667788887775 3589999999988874
No 152
>PF13171 DUF4004: Protein of unknown function (DUF4004)
Probab=23.95 E-value=5e+02 Score=22.80 Aligned_cols=91 Identities=11% Similarity=0.212 Sum_probs=48.6
Q ss_pred ccccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCc--h------------hHHHHHHHHhcC--CCCCcc
Q 017239 14 VSASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLK--G------------ALGERMFNLVTQ--KRNDHK 77 (375)
Q Consensus 14 ~~~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~--~------------~~~~~lf~~~d~--~~~~g~ 77 (375)
....|-|.+++|-.--+.-..+ ...++.+++..+|... + ...+.+.+.+.. .. ...
T Consensus 41 TGQETFFPrekIL~RIekI~~m-------Kd~~SLDELA~mfSp~~~~~~~~~~~l~~~~ivs~~~~~~f~~~~~~-~~~ 112 (199)
T PF13171_consen 41 TGQETFFPREKILERIEKIQKM-------KDDLSLDELAEMFSPNVSDVVFTEEELLKRNIVSQAVLELFMEQIGE-EEE 112 (199)
T ss_pred CCccccCcHHHHHHHHHHHHHh-------cccCCHHHHHHHcCCCcccceecHHHHHHcCcccHHHHHHHHHHhCc-ccc
Confidence 3456677777765444444444 2468888888887532 0 011222222211 12 345
Q ss_pred eeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 78 LTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 78 I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
.+|.+.+.... +. ..-.+|.|+.+|...++..+..
T Consensus 113 f~f~e~l~lyv----------l~------~ll~sg~is~eE~k~l~~~l~~ 147 (199)
T PF13171_consen 113 FSFEELLFLYV----------LE------KLLQSGEISLEEGKMLLQFLEE 147 (199)
T ss_pred ccHHHHHHHHH----------HH------HHHHhCCCCHHHHHHHHHHHHH
Confidence 66666554433 11 1124688999998877766544
No 153
>TIGR01321 TrpR trp operon repressor, proteobacterial. This model represents TrpR, the repressor of the trp operon. It is found so far only in the gamma subdivision of the proteobacteria and in Chlamydia trachomatis. All members belong to species capable of tryptophan biosynthesis.
Probab=23.57 E-value=2.8e+02 Score=21.20 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHHhhhcCchhHHHHHHHHhcCCCCCcceeHHHHHH
Q 017239 19 SFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQAYFGLKGALGERMFNLVTQKRNDHKLTFEDLVV 85 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~~~g~I~f~eF~~ 85 (375)
-++++|+..+..++.-...- -.+.++..++...++.....+.|.=+.+... ..++.+|+.
T Consensus 32 lLTp~E~~~l~~R~~i~~~L---l~~~~tQrEIa~~lGiS~atIsR~sn~lk~~----~~~~~~~l~ 91 (94)
T TIGR01321 32 ILTRSEREDLGDRIRIVNEL---LNGNMSQREIASKLGVSIATITRGSNNLKTM----DPNFKQFLR 91 (94)
T ss_pred hCCHHHHHHHHHHHHHHHHH---HhCCCCHHHHHHHhCCChhhhhHHHhhcccC----CHHHHHHHH
Confidence 47899999988888776421 1467999999999988766666666655322 255555553
No 154
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.27 E-value=1.2e+02 Score=30.41 Aligned_cols=63 Identities=17% Similarity=0.115 Sum_probs=42.4
Q ss_pred HHHHHHhcCCCCCcceeHHHHHHHHHhhcCCCHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHHHH
Q 017239 63 ERMFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 128 (375)
Q Consensus 63 ~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~~~~ekl~~~F~l~D~d~dG~Is~~El~~~l~~~~~ 128 (375)
..-|+.+..|- .|.|+-..=..++.. ..-.-+.|..++++.|.|.||.++..||...+.-+..
T Consensus 234 vnQFrtvQpDp-~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVa 296 (737)
T KOG1955|consen 234 VNQFRTVQPDP-HGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVA 296 (737)
T ss_pred HhhhhcccCCc-ccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHhheee
Confidence 34455666665 666665433333221 1223567889999999999999999999998876543
No 155
>PLN02952 phosphoinositide phospholipase C
Probab=22.05 E-value=4.4e+02 Score=27.48 Aligned_cols=81 Identities=7% Similarity=-0.028 Sum_probs=51.3
Q ss_pred CCCCcCHHHHHhhhcC-------chhHHHHHHHHhcCCCCCcceeHHHHHHHHHhhcCC--CHHHHHHHHHHhh----c-
Q 017239 42 NGRYISPSIFQAYFGL-------KGALGERMFNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDEIEEFIYQLL----D- 107 (375)
Q Consensus 42 ~~g~i~~~ef~~~l~~-------~~~~~~~lf~~~d~~~~~g~I~f~eF~~~l~~~~~~--~~~ekl~~~F~l~----D- 107 (375)
+.|.++.++|+.+.+. +.+.+..||..+..+ .+.|+.++|..+|....+. ...+.+..++..+ .
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~--~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~ 90 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG--GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHH 90 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccc
Confidence 3578888888755332 246788899888654 4579999999999876532 2233444444332 1
Q ss_pred --CCCCCccCHHHHHHHHH
Q 017239 108 --VNDDGVLGRSDLESVVI 124 (375)
Q Consensus 108 --~d~dG~Is~~El~~~l~ 124 (375)
..+...++.+.|...+.
T Consensus 91 ~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 91 VTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred cccccccCcCHHHHHHHHc
Confidence 11234578888887775
No 156
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=21.99 E-value=1.6e+02 Score=27.72 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHHHHHHHhhh---cCCCCCCcCHHHHHhhhcCc-----hhH-HHHHHHHhcCCCCCcceeHHHHHHHHHh
Q 017239 19 SFAQHELEDLKSLFKSLAAQ---SQSNGRYISPSIFQAYFGLK-----GAL-GERMFNLVTQKRNDHKLTFEDLVVAKAT 89 (375)
Q Consensus 19 ~fs~~ei~~l~~~F~~ld~~---~~~~~g~i~~~ef~~~l~~~-----~~~-~~~lf~~~d~~~~~g~I~f~eF~~~l~~ 89 (375)
.+++++.++-...|...-+. ...-+.-=+++.+...+... +.+ -.-.|...|.|+ ||.++=.|+-..+..
T Consensus 194 ~l~eE~Rkeaesk~EE~~krH~~HpKvnhPGSkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~Ns-DGfldeqELEaLFtk 272 (442)
T KOG3866|consen 194 QLTEEERKEAESKHEESLKRHNDHPKVNHPGSKDQLKEVWEESDGLDPNQFDPKTFFALHDLNS-DGFLDEQELEALFTK 272 (442)
T ss_pred hcCHHHHHHHHHHHHHHHHhhccCccCCCCCcHHHHHHHHHHhcCCCcccCCcchheeeeccCC-cccccHHHHHHHHHH
Confidence 45666666666555443221 11112233566666666542 112 234555666776 777776665544332
Q ss_pred ----hcCC-CH--------HHHHH---HHHHhhcCCCCCccCHHHHHHHH
Q 017239 90 ----YEKG-TK--------DEIEE---FIYQLLDVNDDGVLGRSDLESVV 123 (375)
Q Consensus 90 ----~~~~-~~--------~ekl~---~~F~l~D~d~dG~Is~~El~~~l 123 (375)
+... .. +++++ .+++-.|.|.|..||.+||...-
T Consensus 273 ELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 273 ELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred HHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence 1111 11 22222 35677777777777777765544
No 157
>PF09107 SelB-wing_3: Elongation factor SelB, winged helix ; InterPro: IPR015191 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 3". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; GO: 0003723 RNA binding, 0003746 translation elongation factor activity, 0005525 GTP binding, 0001514 selenocysteine incorporation, 0005737 cytoplasm; PDB: 2PJP_A 2UWM_A 1WSU_B 1LVA_A 2PLY_A.
Probab=21.51 E-value=1.2e+02 Score=20.19 Aligned_cols=31 Identities=13% Similarity=0.264 Sum_probs=25.5
Q ss_pred CCCcCHHHHHhhhcCchhHHHHHHHHhcCCC
Q 017239 43 GRYISPSIFQAYFGLKGALGERMFNLVTQKR 73 (375)
Q Consensus 43 ~g~i~~~ef~~~l~~~~~~~~~lf~~~d~~~ 73 (375)
+|.|+..+|.+.++..-..+-.+.+.||..+
T Consensus 8 ~~~itv~~~rd~lg~sRK~ai~lLE~lD~~g 38 (50)
T PF09107_consen 8 NGEITVAEFRDLLGLSRKYAIPLLEYLDREG 38 (50)
T ss_dssp TSSBEHHHHHHHHTS-HHHHHHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHCccHHHHHHHHHHHhccC
Confidence 6899999999999998777778888888654
No 158
>cd08327 CARD_RAIDD Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain. Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodime
Probab=20.54 E-value=2.4e+02 Score=21.49 Aligned_cols=57 Identities=19% Similarity=0.231 Sum_probs=40.3
Q ss_pred CCCccCHHHHHHHHHHHHHHHhchhhcccCCCchHHHHHHHHHhccccccCccCCCCCCCHHHHHHHHHhcchHHHHhhc
Q 017239 110 DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGG 189 (375)
Q Consensus 110 ~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~d~~~~dg~Is~~ef~~~~~~~p~~~~~l~~ 189 (375)
++|.||.++...+-. .....+.+..+++-+ ..-|.--|+.|++.+...|.+.+-+-.
T Consensus 32 ~~gIlT~~~~e~I~a---------------~~T~~~k~~~LLdiL--------p~RG~~AF~~F~~aL~e~~~l~~~l~~ 88 (94)
T cd08327 32 QEGILTESHVEEIES---------------QTTSRRKTMKLLDIL--------PSRGPKAFHAFLDSLEEFPWVRDKLLK 88 (94)
T ss_pred hCCCCCHHHHHHHHc---------------cCChHHHHHHHHHHH--------HhhChhHHHHHHHHHHHHHHHHHHHHH
Confidence 457888887776542 244556777777753 245788899999999988888776544
No 159
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=20.50 E-value=2.3e+02 Score=25.81 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=32.9
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHHHHH-hhhcC--chhHHHHHHHHhcCC
Q 017239 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPSIFQ-AYFGL--KGALGERMFNLVTQK 72 (375)
Q Consensus 16 ~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~ef~-~~l~~--~~~~~~~lf~~~d~~ 72 (375)
+...|+++++..++++|+.+=.. .++.++-. .+-.. ..+.++.+.+++...
T Consensus 196 ~r~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s 249 (255)
T PRK12461 196 RRRGFSSRAIRALKRAYKIIYRS------GLSVQQAVAELELQQFESPEVEELIDFIKAS 249 (255)
T ss_pred hhcCCCHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHhccCCHHHHHHHHHHHcc
Confidence 34489999999999999998542 33444433 33222 256677777777543
No 160
>COG1043 LpxA Acyl-[acyl carrier protein]
Probab=20.03 E-value=2.9e+02 Score=25.17 Aligned_cols=52 Identities=13% Similarity=0.297 Sum_probs=31.9
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhhcCCCCCCcCHH-HHHhhhcC--chhHHHHHHHHhcCCC
Q 017239 16 ASRSFAQHELEDLKSLFKSLAAQSQSNGRYISPS-IFQAYFGL--KGALGERMFNLVTQKR 73 (375)
Q Consensus 16 ~~t~fs~~ei~~l~~~F~~ld~~~~~~~g~i~~~-ef~~~l~~--~~~~~~~lf~~~d~~~ 73 (375)
+.+.|+++++..|+++|+.+-.. + .+.+ .....++. ..+.+..+.+.+.+..
T Consensus 201 kRrgf~~e~i~alr~ayk~lfr~----~--~~~~e~~~~i~~~~~~~~~v~~~~dFi~~s~ 255 (260)
T COG1043 201 KRRGFSREEIHALRKAYKLLFRS----G--LTLREALEEIAEEYADNPEVKEFIDFIASSS 255 (260)
T ss_pred eccCCCHHHHHHHHHHHHHHeeC----C--CCHHHHHHHHHHHhcCChHHHHHHHHHhhcc
Confidence 34499999999999999998652 2 2322 22333333 2455666666665443
Done!