BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017240
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38932|LCYE_ARATH Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana
GN=LUT2 PE=1 SV=2
Length = 524
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/377 (54%), Positives = 249/377 (66%), Gaps = 49/377 (12%)
Query: 5 CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAV 64
C+GARNFAAMAVS FP+ RRK V + S + V A ++ SESCVAV
Sbjct: 3 CVGARNFAAMAVSTFPSWSCRRK-FPVVKRYSYRNIRFGLCSVRASGGGSSG-SESCVAV 60
Query: 65 KE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAG 119
+E ED++KAGGS+++FVQMQQNK MD+QSKL DKLPPISIG+G LDLVVIGCGPAG
Sbjct: 61 REDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAG 120
Query: 120 LALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179
LALAAESAKLGL VGLIGPDLPFTNNYGVWEDEF DLGL+ CIEHVWR+T+VY+D+D+PI
Sbjct: 121 LALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPI 180
Query: 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLA 239
IGRAYGRVSR LLHEELLRRCVESGVSYLSSKV+SITE++ G RLVAC+ + ++PCRLA
Sbjct: 181 TIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLA 240
Query: 240 TVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPN 299
TVASGAASGKLL+YE VGG V T Y V + +P
Sbjct: 241 TVASGAASGKLLQYE------VGG----------------PRVCVQTAYGVEVEVENSPY 278
Query: 300 YASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFF------------- 346
+ ++ D++ ++ ++ + L+ + R FF
Sbjct: 279 DPDQMVFMDYRDYTNEKV------RSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPF 332
Query: 347 -LFGLALILQLDIEGIR 362
L L+L+LD GIR
Sbjct: 333 DLLKTKLMLRLDTLGIR 349
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 104/121 (85%), Gaps = 6/121 (4%)
Query: 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313
EEWSYIPVGGSLPNTEQ+NLAFGAAASMVHPATGYSVVRSLSEAP YAS IA IL+ +
Sbjct: 356 EEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILREE-- 413
Query: 314 RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPK 373
T +Q N NIS QAW+TLWP ERKRQRAFFLFGLALI+Q D EGIR+FFRTFFRLPK
Sbjct: 414 ----TTKQINSNISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPK 469
Query: 374 W 374
W
Sbjct: 470 W 470
>sp|O65837|LCYE_SOLLC Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum
GN=CRTL-E-1 PE=2 SV=1
Length = 526
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 168/255 (65%), Positives = 200/255 (78%), Gaps = 10/255 (3%)
Query: 5 CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSNNAGSESCVAV 64
C+G +N AMAV P R R + ++ ++ + Y+ ++S GS+SCV
Sbjct: 3 CVGVQNVGAMAVLTRP--RLNRWSGGELCQEKSIFLAYEQYESKCNSSS---GSDSCVVD 57
Query: 65 KE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAG 119
KE EDYIKAGGSQLVFVQMQQ K MD+QSKL+D+L IS G +LDLVVIGCGPAG
Sbjct: 58 KEDFADEEDYIKAGGSQLVFVQMQQKKDMDQQSKLSDELRQISAGQTVLDLVVIGCGPAG 117
Query: 120 LALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179
LALAAESAKLGLNVGL+GPDLPFTNNYGVWEDEF+DLGL+ CIEHVWRDT+VY+D+DEPI
Sbjct: 118 LALAAESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDEPI 177
Query: 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLA 239
LIGRAYGRVSRH LHEELL+RCVE+GV YL+SKV+ I E+T+G LV CE D+++PCR
Sbjct: 178 LIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSKVDRIVEATNGQSLVECEGDVVIPCRFV 237
Query: 240 TVASGAASGKLLEYE 254
TVASGAASGK L+YE
Sbjct: 238 TVASGAASGKFLQYE 252
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 102/121 (84%), Gaps = 1/121 (0%)
Query: 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313
EEWSYIPVGGSLPNTEQ+ LAFGAAASMVHPATGYSVVRSLSEAP AS +A IL+ +S
Sbjct: 353 EEWSYIPVGGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQHYS 412
Query: 314 RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPK 373
+ LT S QAWNTLWPQERKRQR+FFLFGLALILQLDIEGIR+FFR FFR+PK
Sbjct: 413 KNMLTSSSIPSI-STQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPK 471
Query: 374 W 374
W
Sbjct: 472 W 472
>sp|Q40424|LCYB_NARPS Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=LCY1 PE=2 SV=1
Length = 503
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 249 KLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308
K +E +E IP+GG LP QR + G A MVHP+TGY V R+L+ AP A++I L
Sbjct: 331 KSIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYL 390
Query: 309 KHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTF 368
D S ++S W LWP ER+RQR FF FG+ ++L+LD+EG R FF F
Sbjct: 391 VSDSG-------LSGNDLSADVWKDLWPIERRRQREFFCFGMDILLKLDLEGTRRFFDAF 443
Query: 369 FRL-PKWY 375
F L P+++
Sbjct: 444 FDLEPRYW 451
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHV 165
LDL V+G GP + + S GL+V I P+ L + NNYGVW DEF D+ L C++
Sbjct: 88 LDLAVVGGGPLARS-CSTSLGGGLSVVSIDPNPKLIWPNNYGVWVDEFEDMDLLDCLDAT 146
Query: 166 WRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRL 225
W +VY+D+ + R Y RV+R L +++++CV +GV + + V L
Sbjct: 147 WSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMMKKCVSNGVRFHQATVVKAMHEEEKSYL 206
Query: 226 VACEHDMIVPCRLATVASGAASGKLLEYEE 255
+ C + + R+ A+G S L++Y++
Sbjct: 207 I-CSDGVTIDARVVLDATG-FSRCLVQYDK 234
>sp|Q43415|LCYB_CAPAN Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=LCY1 PE=2 SV=1
Length = 498
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 249 KLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308
K +E +E IP+GG LP QR + G A MVHP+TGY V R+L+ AP A+AI L
Sbjct: 326 KSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYL 385
Query: 309 KHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTF 368
+ S S + +S W LWP ER+RQR FF FG+ ++L+LD+ R FF F
Sbjct: 386 SSERS-------HSGDELSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 438
Query: 369 FRL-PKWY 375
F L P+++
Sbjct: 439 FDLEPRYW 446
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 90 KQSKLADKLPPISIGNGIL-DLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNY 146
K+ L +LP G++ DL V+G GPAGLA+A + ++ GL+V I P+ L + NNY
Sbjct: 63 KKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIWPNNY 122
Query: 147 GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGV 206
GVW DEF + L C++ W VYID+ + R YGRV+R L +++++C+ +GV
Sbjct: 123 GVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKCILNGV 182
Query: 207 SYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEE 255
+ +KV + S L+ C + + + A+G S L++Y++
Sbjct: 183 KFHQAKVIKVIHEESKSMLI-CNDGITIQATVVLDATG-FSRSLVQYDK 229
>sp|Q9M424|NXS_SOLTU Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1
SV=1
Length = 498
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 75 SQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVG 134
S L + + +S D L D + G D+++IG GPAGL LA +K G+ V
Sbjct: 53 SFLDLAPISKPESFDVNISLVDP----NSGRAQFDVIIIGAGPAGLRLAEHVSKYGIKVC 108
Query: 135 LIGPDLPFT---NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRH 191
+ P P + NNYGVW DEF +LGLE C++H W T V+I++ + +GR YGRVSR
Sbjct: 109 CVDPS-PLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYLGRPYGRVSRK 167
Query: 192 LLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251
L LL CVE+ V + +KV + E + C+ + L ASG AS +
Sbjct: 168 KLKLRLLNSCVENRVKFYKAKVWKV-EHEEFESSIVCDDGKKIRGSLVVDASGFAS-DFI 225
Query: 252 EYEE 255
EY++
Sbjct: 226 EYDK 229
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313
EE IP+GG LP Q +A G + +VHP+TGY V RS++ AP A AI L
Sbjct: 331 EEKCVIPMGGPLPRIPQNVMAIGGNSGIVHPSTGYMVARSMALAPVLAEAIVKGLGS--- 387
Query: 314 RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRL-P 372
T + + WN LWP +R+ + FG+ +L+LD++G R F FF L P
Sbjct: 388 ----TRMIRGSQLYHRVWNGLWPLDRRCIGECYSFGMETLLKLDLKGTRRLFDAFFDLDP 443
Query: 373 KWY 375
K++
Sbjct: 444 KYW 446
>sp|Q38933|LCYB_ARATH Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana
GN=LCY1 PE=2 SV=1
Length = 501
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 249 KLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308
K +E +E IP+GG LP QR + G A MVHP+TGY V R+L+ AP A+AI L
Sbjct: 327 KRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYL 386
Query: 309 KHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTF 368
S + + +S + W LWP ER+RQR FF FG+ ++L+LD++ R FF F
Sbjct: 387 GSPSS-----NSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAF 441
Query: 369 FRLPKWY 375
F L Y
Sbjct: 442 FDLQPHY 448
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 109/196 (55%), Gaps = 10/196 (5%)
Query: 63 AVKEEDYIKAGGSQLV-FVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLA 121
A+K + +G + L+ V + +++D + L D + + ++DL ++G GPAGLA
Sbjct: 42 AIKIVSSVVSGSAALLDLVPETKKENLDFELPLYD-----TSKSQVVDLAIVGGGPAGLA 96
Query: 122 LAAESAKLGLNVGLI--GPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179
+A + ++ GL+V I P L + NNYGVW DEF + L C++ W VVY+DE
Sbjct: 97 VAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKK 156
Query: 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLA 239
+ R YGRV+R L ++L++C+ +GV + SKV ++ + +V C + + +
Sbjct: 157 DLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVHEEANSTVV-CSDGVKIQASVV 215
Query: 240 TVASGAASGKLLEYEE 255
A+G S L++Y++
Sbjct: 216 LDATG-FSRCLVQYDK 230
>sp|Q43503|LCYB_SOLLC Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum
GN=LCY1 PE=1 SV=1
Length = 500
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 249 KLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308
K +E +E IP+GG LP QR + G A MVHP+TGY V R+L+ AP A+AI L
Sbjct: 328 KSIEEDEHCLIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPVVANAIIQYL 387
Query: 309 KHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTF 368
+ S S +S W LWP ER+RQR FF FG+ ++L+LD+ R FF F
Sbjct: 388 GSERS-------HSGNELSTAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 440
Query: 369 FRL-PKWY 375
F L P+++
Sbjct: 441 FDLEPRYW 448
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 90 KQSKLADKLPPISIGNGIL-DLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNY 146
K+ L +LP G++ DL V+G GPAGLA+A + ++ GL+V I P+ L + NNY
Sbjct: 65 KKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIWPNNY 124
Query: 147 GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGV 206
GVW DEF + L C++ W VYID++ + R YGRV+R L +++++C+ +GV
Sbjct: 125 GVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCIMNGV 184
Query: 207 SYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEE 255
+ +KV + S L+ C + + + A+G S L++Y++
Sbjct: 185 KFHQAKVIKVIHEESKSMLI-CNDGITIQATVVLDATG-FSRSLVQYDK 231
>sp|Q43578|LCYB_TOBAC Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1
PE=1 SV=1
Length = 500
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 249 KLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308
K +E +E IP+GGSLP QR + G A +VHP+TGY V R+L+ AP A+AI + L
Sbjct: 328 KSIEEDEHCVIPMGGSLPVIPQRVVGTGGTAGLVHPSTGYMVARTLAAAPVVANAIIHYL 387
Query: 309 KHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTF 368
G NE +S W LWP ER+RQR FF FG+ ++L+LD+ R FF F
Sbjct: 388 ------GSEKDLLGNE-LSAAVWKDLWPIERRRQREFFCFGMDILLKLDLPATRRFFDAF 440
Query: 369 FRL-PKWY 375
F L P+++
Sbjct: 441 FDLEPRYW 448
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 18/214 (8%)
Query: 45 YKVTARATSNNAGSESCVAVKEEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIG 104
+K +R N G CV KA S L+ + + K+ L +LP
Sbjct: 33 HKFGSRKICENWGKGVCV--------KAKSSALLELVPET-----KKENLDFELPMYDPS 79
Query: 105 NG-ILDLVVIGCGPAGLALAAESAKLGLNVGLI--GPDLPFTNNYGVWEDEFRDLGLEGC 161
G ++DL V+G GPAGLA+A + ++ GL+V I P L + NNYGVW DEF + L C
Sbjct: 80 KGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSPKLIWPNNYGVWVDEFEAMDLLDC 139
Query: 162 IEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTS 221
++ W TVVYID++ + R YGRV+R L +++++C+ +GV + +KV + +
Sbjct: 140 LDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCILNGVKFHHAKVIKVIHEEA 199
Query: 222 GHRLVACEHDMIVPCRLATVASGAASGKLLEYEE 255
L+ C + + + A+G S L++Y++
Sbjct: 200 KSMLI-CNDGVTIQATVVLDATG-FSRCLVQYDK 231
>sp|Q9SEA0|CCS_CITSI Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis
GN=CCS PE=3 SV=1
Length = 503
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 109 DLVVIGCGPAGLALAAE-SAKLGLNVGLIGPDLPFT---NNYGVWEDEFRDLGLEGCIEH 164
D+++IG GPAGL LA + S++ + V + P P + NNYGVW DEF D+GL C++
Sbjct: 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS-PLSTWPNNYGVWVDEFEDIGLVDCLDK 145
Query: 165 VWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHR 224
W T V+I++ + + R YGRVSR++L +LL CV +GV + +KV +
Sbjct: 146 TWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESS 205
Query: 225 LVACEHDMIVPCRLATVASGAASGKLLEYEE 255
+V C+ + L ASG AS +EY++
Sbjct: 206 IV-CDDGNEIKASLIVDASGFASS-FVEYDK 234
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313
+E IP+GG LP Q +A G + ++HPATGY V R+++ AP A AIA L
Sbjct: 336 DEKCLIPMGGPLPVIPQSVMAIGGTSGLIHPATGYMVARTMALAPALADAIAECLGSTRM 395
Query: 314 -RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLP 372
RGR H++ WN LWP +R+ R F+ FG+ +L+LD++G R FF FF L
Sbjct: 396 IRGRPLHQK--------VWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLN 447
Query: 373 KWY 375
+Y
Sbjct: 448 PYY 450
>sp|Q42435|CCS_CAPAN Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum
GN=CCS PE=2 SV=1
Length = 498
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWEDEFRDLGLEGCIEH 164
D+++IG GPAGL LA + +K G+ V + P P + NNYGVW DEF LGLE C++H
Sbjct: 82 FDVIIIGTGPAGLRLAEQVSKYGIKVCCVDPS-PLSMWPNNYGVWVDEFEKLGLEDCLDH 140
Query: 165 VWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHR 224
W + V+I + + + R YGRVSR L +LL CVE+ V + +KV +
Sbjct: 141 KWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESS 200
Query: 225 LVACEHDMIVPCRLATVASGAASGKLLEYEE 255
+V C+ + L ASG AS +EY++
Sbjct: 201 IV-CDDGRKISGSLIVDASGYAS-DFIEYDK 229
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313
EE I +GG LP Q +A G + +VHP++GY V RS++ AP A AI L
Sbjct: 331 EEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMALAPVLAEAIVESLGS--- 387
Query: 314 RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRL-P 372
T + + WN LWP +R+R R + FG+ +L+LD+EG R F FF + P
Sbjct: 388 ----TRMIRGSQLYHRVWNGLWPSDRRRVRECYCFGMETLLKLDLEGTRRLFDAFFDVDP 443
Query: 373 KWY 375
K++
Sbjct: 444 KYW 446
>sp|Q55276|LCYB_SYNE7 Lycopene beta cyclase OS=Synechococcus elongatus (strain PCC 7942)
GN=crtL PE=1 SV=1
Length = 411
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 216 ITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAF 275
E TS A +D + +A+ + +++++EE+ P+ LP+ Q + F
Sbjct: 208 FVEETSLAACPAIPYDRLKQRLYQRLATRGVTVQVIQHEEYCLFPMNLPLPDLTQSVVGF 267
Query: 276 GAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLW 335
G AASMVHPA+GY V L AP+ A+AIA L S + ++ QAW LW
Sbjct: 268 GGAASMVHPASGYMVGALLRRAPDLANAIAAGLNASSSL-------TTAELATQAWRGLW 320
Query: 336 PQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPK--WY 375
P E+ R+ + FGL +++ + F+TFF LPK WY
Sbjct: 321 PTEKIRKHYIYQFGLEKLMRFSEAQLNHHFQTFFGLPKEQWY 362
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 107 ILDLVVIGCGPAGLALAAESAKLGLNV-GL--IGPDLPFTNNYGVWEDEFRDLGLEGCIE 163
+ D +VIG GPAGLA+AAE A+ GL V GL + P P+ N YG+W E LGLE
Sbjct: 1 MFDALVIGSGPAGLAIAAELAQRGLKVQGLSPVDPFHPWENTYGIWGPELDSLGLEHLFG 60
Query: 164 HVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGH 223
H W + V Y E P+ YG R L + LR+C + G+ + K +I S H
Sbjct: 61 HRWSNCVSYFGE-APVQHQYNYGLFDRAQLQQHWLRQCEQGGLQWQLGKAAAIAHD-SHH 118
Query: 224 RLVACEHDMIVPCRLATVASG 244
V + RL +G
Sbjct: 119 SCVTTAAGQELQARLVVDTTG 139
>sp|Q9RW68|Y801_DEIRA Uncharacterized carotenoid cyclase DR_0801 OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=DR_0801 PE=3 SV=1
Length = 410
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIG--PDLPFTNNYGVWEDEFRDLGLEGCIEHVW 166
D++VIG GP+G AL+AE A GL+V + P PF YG W + GC E VW
Sbjct: 10 DVLVIGGGPSGTALSAELAARGLDVQQLAPHPPRPFPATYGAWLGDLPTWA-RGCAEQVW 68
Query: 167 RDTVVYIDEDEPILIGRAY 185
D Y +P +G+ Y
Sbjct: 69 TDVRAYTGP-QPTSLGQPY 86
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 252 EYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311
E EEW P+ P LA+GAAA VHP +G+ V +LS+AP A+AIA L
Sbjct: 244 ESEEWVAFPMNAQAP-APGGVLAYGAAAGRVHPVSGFQVAGALSDAPGVATAIATALCQ- 301
Query: 312 HSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRL 371
++ + W LW ER+ R L G+ +L L+ + FF TFF L
Sbjct: 302 -----------GKDAAAAGWAALWSPERRAAREVHLLGVGALLGLERAELPHFFGTFFGL 350
Query: 372 PK 373
P+
Sbjct: 351 PR 352
>sp|Q8U0P7|MTAD_PYRFU 5-methylthioadenosine/S-adenosylhomocysteine deaminase
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=mtaD PE=3 SV=1
Length = 419
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 277 AAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAW--NTL 334
A A MV A+ + V+ L A + S + RG E++ +Q W N +
Sbjct: 37 APADMVIDASSHLVIPGLINAHTHVSMVLL-------RGL------AEDVPLQEWLQNYI 83
Query: 335 WPQERKRQRAFFLFGLAL-ILQLDIEGIRTFFRTFFRL 371
WP+ER+ +R +G L ++++ G+ TF +F +
Sbjct: 84 WPRERELKRKDIYWGTLLGLVEMARSGVTTFVDMYFHI 121
>sp|B0VUX1|QUEF_ACIBS NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain SDF) GN=queF PE=3 SV=1
Length = 270
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 231 DMIVPCRL-----ATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPA 285
D ++P RL AT+ SG+ +E E +S++ + + P T Q P
Sbjct: 139 DDLMPERLEQHPDATLLKLDESGEEIEVELYSHL-LRSNCPVTSQ-------------PD 184
Query: 286 TGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 185 WGTVFIRFKGKKPCYRSLLAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|Q70G58|NTRC_ORYSJ Thioredoxin reductase NTRC OS=Oryza sativa subsp. japonica
GN=Os07g0657900 PE=1 SV=2
Length = 515
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 99 PPISIGNGILDLVVIGCGPAGLALAAESAKLGLN 132
PP +G G+ +LV+IG GPAG A +A+ L
Sbjct: 61 PPSDLGKGVENLVIIGSGPAGYTAAIYAARANLK 94
>sp|Q5FHA6|ISPG_EHRRG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Ehrlichia
ruminantium (strain Gardel) GN=ispG PE=3 SV=1
Length = 422
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 74 GSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLA-LAAESAKLGLN 132
GS+LV + + +K++ + D L I +G ++IGCG +A L + + L
Sbjct: 69 GSELVRIAINSDKAIKSVPYIRDVL----INHGFNSKMIIGCGQYEIARLVKQYPECALA 124
Query: 133 VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRH- 191
+G I + P +G + RD E IE I D PI IG +G + ++
Sbjct: 125 LGKIRIN-PGNIGFG----DKRDKNFEDIIEFA-------IKNDIPIRIGVNWGSLDKYL 172
Query: 192 ---LLHEELLRRCVESGVSYLSSK--VESITESTSGHRLVACEHDMIVPCRLATV 241
L+H+ LR + L + +IT + ++ + +++ C+++ V
Sbjct: 173 AAKLMHDNSLRGTPDPDYVVLRKALVISAITSAKHAEKVGLPANKIVISCKVSKV 227
>sp|Q5HB57|ISPG_EHRRW 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Ehrlichia
ruminantium (strain Welgevonden) GN=ispG PE=3 SV=1
Length = 422
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 74 GSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLA-LAAESAKLGLN 132
GS+LV + + +K++ + D L I +G ++IGCG +A L + + L
Sbjct: 69 GSELVRIAINSDKAIKSVPYIRDVL----INHGFNSKMIIGCGQYEIARLVKQYPECALA 124
Query: 133 VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRH- 191
+G I + P +G + RD E IE I D PI IG +G + ++
Sbjct: 125 LGKIRIN-PGNIGFG----DKRDKNFEDIIEFA-------IKNDIPIRIGVNWGSLDKYL 172
Query: 192 ---LLHEELLRRCVESGVSYLSSK--VESITESTSGHRLVACEHDMIVPCRLATV 241
L+H+ LR + L + +IT + ++ + +++ C+++ V
Sbjct: 173 AAKLMHDNSLRGTPDPDYVVLRKALVISAITSAKHAEKVGLPANKIVISCKVSKV 227
>sp|O59184|MTAD_PYRHO 5-methylthioadenosine/S-adenosylhomocysteine deaminase
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=mtaD PE=3 SV=2
Length = 421
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 305 AYILKHDHSRGRLTHEQSNENISMQAW--NTLWPQERKRQRAFFLFGLAL-ILQLDIEGI 361
A+I H HS + E++ + W N +WP ERK +R +G L +L++ GI
Sbjct: 55 AFINAHTHS-PMVIFRGLAEDVPLMDWLQNYIWPAERKLKRKEVYWGAKLALLEMVHSGI 113
Query: 362 RTFFRTFFRL 371
TF +F +
Sbjct: 114 STFVDMYFYM 123
>sp|B2HUZ6|QUEF_ACIBC NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain ACICU) GN=queF PE=3 SV=1
Length = 270
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 231 DMIVPCRL-----ATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPA 285
D ++P RL AT+ SG+ +E E +S++ + + P T Q P
Sbjct: 139 DDLMPERLEQHPDATLLKLDESGEEIEVELYSHL-LRSNCPVTGQ-------------PD 184
Query: 286 TGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 185 WGTVFIRFKGKKPCYRSLLAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|B0VBC6|QUEF_ACIBY NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain AYE) GN=queF PE=3 SV=1
Length = 270
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 231 DMIVPCRL-----ATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPA 285
D ++P RL AT+ SG+ +E E +S++ + + P T Q P
Sbjct: 139 DDLMPERLEQHPDATLLKLDESGEEIEVELYSHL-LRSNCPVTGQ-------------PD 184
Query: 286 TGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 185 WGTVFIRFKGKKPCYRSLLAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|B7I3J1|QUEF_ACIB5 NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain AB0057) GN=queF PE=3 SV=1
Length = 270
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 231 DMIVPCRL-----ATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPA 285
D ++P RL AT+ SG+ +E E +S++ + + P T Q P
Sbjct: 139 DDLMPERLEQHPDATLLKLDESGEEIEVELYSHL-LRSNCPVTGQ-------------PD 184
Query: 286 TGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 185 WGTVFIRFKGKKPCYRSLLAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|B7GZQ9|QUEF_ACIB3 NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain AB307-0294) GN=queF PE=3 SV=1
Length = 270
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 231 DMIVPCRL-----ATVASGAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPA 285
D ++P RL AT+ SG+ +E E +S++ + + P T Q P
Sbjct: 139 DDLMPERLEQHPDATLLKLDESGEEIEVELYSHL-LRSNCPVTGQ-------------PD 184
Query: 286 TGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 185 WGTVFIRFKGKKPCYRSLLAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|A4YIV7|RUBPS_METS5 Putative ribose 1,5-bisphosphate isomerase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1
Length = 271
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRD 168
D+V++G GP+GLA A SAK GL + L F G F + +E + + R+
Sbjct: 30 DVVIVGAGPSGLAAAYYSAKAGLKTTVFERRLSFGGGIGGGAMLFHKIVIESPADEILRE 89
Query: 169 TVVYIDEDE 177
V + + E
Sbjct: 90 IGVKLQKFE 98
>sp|P47348|TRXB_MYCGE Thioredoxin reductase OS=Mycoplasma genitalium (strain ATCC 33530 /
G-37 / NCTC 10195) GN=trxB PE=3 SV=1
Length = 315
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141
I DLV++G GPAG+A A + LN+ +I + P
Sbjct: 15 IYDLVIVGAGPAGIASAIYGKRANLNLAIIEGNTP 49
>sp|A7HMY3|THI4_FERNB Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum
(strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422
PE=3 SV=1
Length = 277
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIE-HVW 166
+D+ + GCGP+ LALA E AK G V + F +L LE +E ++
Sbjct: 26 VDVAIAGCGPSALALATELAKNGRKVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLK 85
Query: 167 RDTVVYIDEDEPILI 181
+ Y EDE I++
Sbjct: 86 EHHIKYKKEDEFIVV 100
>sp|P30635|GSHR_CAEEL Probable glutathione reductase 2 OS=Caenorhabditis elegans
GN=trxr-2 PE=3 SV=2
Length = 503
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 108 LDLVVIGCGPAGLALAAESAKLGLNVGLI 136
DL+VIG G GL+ + +A LG NV LI
Sbjct: 21 FDLIVIGAGSGGLSCSKRAADLGANVALI 49
>sp|P18925|DLDH_AZOVI Dihydrolipoyl dehydrogenase OS=Azotobacter vinelandii PE=1 SV=1
Length = 477
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 108 LDLVVIGCGPAGLALAAESAKLGLNVGLI 136
D++VIG GP G A +SA+LGL LI
Sbjct: 5 FDVIVIGAGPGGYVAAIKSAQLGLKTALI 33
>sp|B1YEQ1|FENR2_EXIS2 Ferredoxin--NADP reductase 2 OS=Exiguobacterium sibiricum (strain
DSM 17290 / JCM 13490 / 255-15) GN=Exig_2773 PE=3 SV=1
Length = 352
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 36/146 (24%)
Query: 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFR-DLGLEGCIEHV 165
+ D+ VIG GPAGL S G+ LI E++ +LG G I HV
Sbjct: 6 LFDVTVIGGGPAGLYSTFYSGLRGMKTKLI---------------EYQAELG--GKI-HV 47
Query: 166 WRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSY-----LSSKVESITEST 220
+ + +++ +P + G +L+ + VE G+++ L+ K+ SIT+
Sbjct: 48 YPEKMIWDVGGQPPITGA------------KLMEQLVEQGLTFNPTVHLNEKIISITKDV 95
Query: 221 SGHRLVACEHDMIVPCRLATVASGAA 246
G+ ++ E MI + VA G
Sbjct: 96 FGNFVLEAESGMIHYSKTVIVAVGGG 121
>sp|Q5HBC7|FENR_EHRRW Ferredoxin--NADP reductase OS=Ehrlichia ruminantium (strain
Welgevonden) GN=Erum4020 PE=3 SV=1
Length = 337
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVW 166
+ D+VVIG GP G+ +S L + +I D ++G +
Sbjct: 5 VTDIVVIGAGPIGIFTVFQSGMLSMQCCVI--------------DSLNEIGGQ------- 43
Query: 167 RDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLV 226
V + ++PI AY ++ L L+ + YL +V E + LV
Sbjct: 44 ---CVALYPEKPIYDIPAYPIITAKELINNLVEQSKPFDPQYLLGQVAEKIEEYIDYLLV 100
Query: 227 ACEHDMIVPCRLATVASGAAS 247
+ ++ C+ +A+G+ +
Sbjct: 101 KTNYGTVIQCKAIIIAAGSGA 121
>sp|C0QPI1|MNMG_PERMH tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=mnmG PE=3 SV=1
Length = 623
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139
D+VVIG G AG+ A SAKLG+ LI D
Sbjct: 8 DVVVIGGGHAGIEAALASAKLGVKTALITLD 38
>sp|A3M741|QUEF_ACIBT NADPH-dependent 7-cyano-7-deazaguanine reductase OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=queF PE=3
SV=2
Length = 270
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 283 HPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQE 338
P G +R + P Y S +AYI+ + G HEQ E I W L P++
Sbjct: 182 QPDWGTVFIRFKGKKPCYRSILAYIISYRQHNG--FHEQCVEQIFADIWQNLQPEK 235
>sp|P66006|STHA_MYCTU Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1
Length = 468
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI 136
D+VVIG GP G A SAKLG +V ++
Sbjct: 5 DIVVIGSGPGGQKAAIASAKLGKSVAIV 32
>sp|A5U665|STHA_MYCTA Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3
SV=1
Length = 468
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI 136
D+VVIG GP G A SAKLG +V ++
Sbjct: 5 DIVVIGSGPGGQKAAIASAKLGKSVAIV 32
>sp|C1AFH2|STHA_MYCBT Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA
PE=3 SV=1
Length = 468
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI 136
D+VVIG GP G A SAKLG +V ++
Sbjct: 5 DIVVIGSGPGGQKAAIASAKLGKSVAIV 32
>sp|A1KM51|STHA_MYCBP Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1
Length = 468
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI 136
D+VVIG GP G A SAKLG +V ++
Sbjct: 5 DIVVIGSGPGGQKAAIASAKLGKSVAIV 32
>sp|P66007|STHA_MYCBO Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=sthA PE=3 SV=1
Length = 468
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLI 136
D+VVIG GP G A SAKLG +V ++
Sbjct: 5 DIVVIGSGPGGQKAAIASAKLGKSVAIV 32
>sp|Q5BLE8|RETST_DANRE Putative all-trans-retinol 13,14-reductase OS=Danio rerio GN=retsat
PE=2 SV=1
Length = 607
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 77 LVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNV 133
+VF + +NK + KQ LA ++P LD VV+G G GLA+A AK+G V
Sbjct: 39 MVFDRKLKNKVL-KQGFLASRVPED------LDAVVVGSGIGGLAIAVLLAKVGKKV 88
>sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dld1 PE=2 SV=2
Length = 511
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 104 GNGILDLVVIGCGPAGLALAAESAKLGL 131
GNG DL VIG GP G A A+LGL
Sbjct: 42 GNGEYDLCVIGGGPGGYVAAIRGAQLGL 69
>sp|A5GPI1|MNMG_SYNPW tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Synechococcus sp. (strain WH7803) GN=mnmG PE=3 SV=1
Length = 659
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLI 136
I D++V+G G AG A SA+LGLN L
Sbjct: 10 IFDVIVVGGGHAGCEAAITSARLGLNTALF 39
>sp|P66004|DLDH_MYCTU Dihydrolipoyl dehydrogenase OS=Mycobacterium tuberculosis GN=lpdC
PE=1 SV=1
Length = 464
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138
D+VV+G GP G A +A+LGL+ ++ P
Sbjct: 5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEP 34
>sp|P66005|DLDH_MYCBO Dihydrolipoyl dehydrogenase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=lpd PE=3 SV=1
Length = 464
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138
D+VV+G GP G A +A+LGL+ ++ P
Sbjct: 5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEP 34
>sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1
Length = 497
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNV 133
DLVVIG GP G A ++A+LG+ V
Sbjct: 32 DLVVIGAGPGGYVAAIKAAQLGMKV 56
>sp|Q50068|DLDH_MYCLE Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae (strain TN)
GN=lpd PE=3 SV=1
Length = 467
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138
D+VV+G GP G A +A+LGL+ ++ P
Sbjct: 5 DVVVLGAGPGGYVAAIRAAQLGLSTAVVEP 34
>sp|P26829|DHNA_BACYN NADH dehydrogenase OS=Bacillus sp. (strain YN-1) GN=ahpF PE=1 SV=1
Length = 519
Score = 31.6 bits (70), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 92 SKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLI 136
S+LADK P D++V+G GPAG + A +A+ G+ G++
Sbjct: 201 SELADKDP--------FDVLVVGGGPAGASSAIYAARKGIRTGIV 237
>sp|C3MWW9|RUBPS_SULIM Putative ribose 1,5-bisphosphate isomerase OS=Sulfolobus islandicus
(strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1
Length = 267
Score = 31.6 bits (70), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRD 168
D+V++G GP+GL+ A AK GL + L F G F L +E + + R+
Sbjct: 32 DVVIVGAGPSGLSAAYYLAKAGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILRE 91
Query: 169 TVVYIDEDE 177
V + E E
Sbjct: 92 VNVRLKEVE 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,681,410
Number of Sequences: 539616
Number of extensions: 5551464
Number of successful extensions: 16206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 16099
Number of HSP's gapped (non-prelim): 101
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)