Query 017240
Match_columns 375
No_of_seqs 442 out of 3831
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:14:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 4.5E-29 1.6E-33 240.4 22.1 254 106-370 3-367 (397)
2 3cgv_A Geranylgeranyl reductas 99.9 6.2E-26 2.1E-30 219.2 23.4 254 107-371 4-368 (397)
3 3atr_A Conserved archaeal prot 99.9 1.3E-23 4.4E-28 207.3 25.1 249 107-366 6-368 (453)
4 3rp8_A Flavoprotein monooxygen 99.9 4.5E-23 1.6E-27 200.4 22.8 199 105-306 21-337 (407)
5 3nix_A Flavoprotein/dehydrogen 99.9 1.9E-22 6.3E-27 196.6 25.0 206 106-311 4-329 (421)
6 3fmw_A Oxygenase; mithramycin, 99.9 4.8E-23 1.6E-27 208.4 19.7 264 106-373 48-430 (570)
7 3e1t_A Halogenase; flavoprotei 99.9 2.5E-22 8.5E-27 201.1 23.2 236 106-347 6-367 (512)
8 4hb9_A Similarities with proba 99.9 8.5E-23 2.9E-27 197.7 19.1 202 108-312 2-353 (412)
9 3ihg_A RDME; flavoenzyme, anth 99.9 2.5E-22 8.6E-27 202.1 23.0 213 105-317 3-348 (535)
10 2qa2_A CABE, polyketide oxygen 99.9 1.6E-22 5.4E-27 201.8 20.7 210 106-317 11-325 (499)
11 2qa1_A PGAE, polyketide oxygen 99.9 2.1E-22 7.3E-27 200.9 20.7 211 105-317 9-324 (500)
12 1k0i_A P-hydroxybenzoate hydro 99.9 1.3E-21 4.5E-26 189.1 24.3 263 107-373 2-390 (394)
13 3i3l_A Alkylhalidase CMLS; fla 99.9 2.9E-22 9.8E-27 203.3 19.8 234 107-346 23-378 (591)
14 2x3n_A Probable FAD-dependent 99.9 9.7E-21 3.3E-25 183.4 20.4 205 106-311 5-327 (399)
15 2r0c_A REBC; flavin adenine di 99.8 5.2E-20 1.8E-24 185.7 21.4 209 106-318 25-357 (549)
16 2gmh_A Electron transfer flavo 99.8 3.1E-20 1E-24 188.6 19.2 237 106-347 34-423 (584)
17 3c96_A Flavin-containing monoo 99.8 3.1E-20 1.1E-24 180.6 17.6 142 107-250 4-172 (410)
18 2dkh_A 3-hydroxybenzoate hydro 99.8 4.9E-20 1.7E-24 189.1 19.8 212 106-317 31-389 (639)
19 1pn0_A Phenol 2-monooxygenase; 99.8 6.2E-20 2.1E-24 188.8 20.5 211 107-317 8-398 (665)
20 2xdo_A TETX2 protein; tetracyc 99.8 5.7E-20 1.9E-24 178.1 18.0 140 107-249 26-184 (398)
21 2vou_A 2,6-dihydroxypyridine h 99.8 7.4E-19 2.5E-23 170.2 20.8 139 106-248 4-154 (397)
22 3alj_A 2-methyl-3-hydroxypyrid 99.8 1.7E-19 5.8E-24 173.6 15.2 139 107-249 11-162 (379)
23 2aqj_A Tryptophan halogenase, 99.8 1.8E-18 6.2E-23 174.1 18.3 199 106-305 4-365 (538)
24 2pyx_A Tryptophan halogenase; 99.8 3.7E-18 1.3E-22 171.4 19.9 198 107-305 7-380 (526)
25 2e4g_A Tryptophan halogenase; 99.8 9.2E-18 3.1E-22 169.3 19.1 199 106-305 24-396 (550)
26 2weu_A Tryptophan 5-halogenase 99.8 5.6E-18 1.9E-22 169.4 16.3 118 187-305 169-373 (511)
27 3c4a_A Probable tryptophan hyd 99.7 2.6E-18 8.8E-23 165.5 9.8 185 108-306 1-298 (381)
28 2ywl_A Thioredoxin reductase r 99.7 2.6E-16 8.8E-21 135.2 16.7 167 108-311 2-173 (180)
29 4fk1_A Putative thioredoxin re 99.7 2.5E-15 8.7E-20 139.9 16.6 114 105-248 4-118 (304)
30 2cul_A Glucose-inhibited divis 99.6 5.6E-15 1.9E-19 132.4 16.1 124 107-250 3-128 (232)
31 2bry_A NEDD9 interacting prote 99.6 2.9E-15 9.9E-20 149.2 15.2 129 106-249 91-232 (497)
32 4gcm_A TRXR, thioredoxin reduc 99.6 1.4E-14 4.8E-19 135.2 17.9 111 104-247 3-116 (312)
33 4a5l_A Thioredoxin reductase; 99.6 2.2E-14 7.4E-19 133.7 17.8 117 107-247 4-121 (314)
34 3ihm_A Styrene monooxygenase A 99.6 5E-15 1.7E-19 144.8 13.6 103 107-209 22-140 (430)
35 4a9w_A Monooxygenase; baeyer-v 99.6 8.7E-15 3E-19 138.3 12.8 160 107-279 3-173 (357)
36 3v76_A Flavoprotein; structura 99.6 1.5E-14 5.2E-19 140.7 13.6 138 105-248 25-188 (417)
37 1yvv_A Amine oxidase, flavin-c 99.5 4.7E-14 1.6E-18 132.7 13.8 137 108-248 3-163 (336)
38 2zbw_A Thioredoxin reductase; 99.5 3.4E-14 1.1E-18 133.7 11.2 117 106-247 4-121 (335)
39 3fbs_A Oxidoreductase; structu 99.5 4.4E-14 1.5E-18 130.2 11.6 141 108-280 3-152 (297)
40 3gwf_A Cyclohexanone monooxyge 99.5 5.5E-14 1.9E-18 141.2 13.0 169 106-280 7-189 (540)
41 3ab1_A Ferredoxin--NADP reduct 99.5 5.8E-14 2E-18 133.7 12.2 117 107-247 14-131 (360)
42 4ap3_A Steroid monooxygenase; 99.5 9.2E-14 3.1E-18 139.8 13.0 168 106-280 20-202 (549)
43 3dme_A Conserved exported prot 99.5 8.8E-14 3E-18 132.1 12.1 144 107-250 4-212 (369)
44 2i0z_A NAD(FAD)-utilizing dehy 99.5 2.2E-13 7.5E-18 133.8 15.1 141 106-247 25-191 (447)
45 1qo8_A Flavocytochrome C3 fuma 99.5 2.2E-13 7.4E-18 137.8 15.5 145 105-249 119-314 (566)
46 1y56_B Sarcosine oxidase; dehy 99.5 2.1E-13 7E-18 130.7 14.4 143 106-249 4-207 (382)
47 3d1c_A Flavin-containing putat 99.5 4.1E-14 1.4E-18 134.8 9.3 168 107-279 4-176 (369)
48 2gv8_A Monooxygenase; FMO, FAD 99.5 9.1E-14 3.1E-18 136.5 11.9 175 107-282 6-225 (447)
49 3ces_A MNMG, tRNA uridine 5-ca 99.5 3E-13 1E-17 136.8 15.9 141 107-249 28-183 (651)
50 2zxi_A TRNA uridine 5-carboxym 99.5 4.1E-13 1.4E-17 135.3 15.7 141 107-249 27-182 (637)
51 3lzw_A Ferredoxin--NADP reduct 99.5 1.2E-13 4.2E-18 129.3 11.1 148 107-279 7-164 (332)
52 3ps9_A TRNA 5-methylaminomethy 99.5 2.3E-13 8E-18 140.4 14.2 66 185-251 411-477 (676)
53 3nlc_A Uncharacterized protein 99.5 4.9E-13 1.7E-17 133.9 16.0 141 106-248 106-278 (549)
54 1w4x_A Phenylacetone monooxyge 99.5 4.4E-13 1.5E-17 134.9 14.8 169 106-280 15-197 (542)
55 3f8d_A Thioredoxin reductase ( 99.5 1.8E-13 6E-18 127.6 10.9 142 107-279 15-164 (323)
56 2uzz_A N-methyl-L-tryptophan o 99.5 2.4E-13 8.1E-18 129.8 11.9 64 185-250 143-207 (372)
57 2gag_B Heterotetrameric sarcos 99.5 3.1E-13 1E-17 130.4 12.7 63 186-249 169-232 (405)
58 2q0l_A TRXR, thioredoxin reduc 99.5 2.2E-13 7.5E-18 126.7 11.1 143 108-279 2-153 (311)
59 2q7v_A Thioredoxin reductase; 99.5 1.8E-13 6.2E-18 128.3 10.5 145 107-279 8-162 (325)
60 2gqf_A Hypothetical protein HI 99.5 7.9E-13 2.7E-17 128.0 15.0 135 107-248 4-169 (401)
61 3jsk_A Cypbp37 protein; octame 99.5 1.6E-13 5.4E-18 129.0 9.6 180 107-309 79-335 (344)
62 1rp0_A ARA6, thiazole biosynth 99.4 1.2E-12 4E-17 120.8 15.2 182 107-311 39-277 (284)
63 3uox_A Otemo; baeyer-villiger 99.4 4.6E-13 1.6E-17 134.6 13.3 169 106-281 8-197 (545)
64 3dje_A Fructosyl amine: oxygen 99.4 1.1E-12 3.9E-17 128.0 15.7 67 186-252 156-226 (438)
65 3pvc_A TRNA 5-methylaminomethy 99.4 2.7E-13 9.2E-18 140.2 11.6 66 185-251 406-473 (689)
66 1y0p_A Fumarate reductase flav 99.4 1E-12 3.5E-17 133.0 15.7 144 105-248 124-318 (571)
67 2xve_A Flavin-containing monoo 99.4 8.6E-13 3E-17 130.2 14.5 175 108-283 3-211 (464)
68 3nyc_A D-arginine dehydrogenas 99.4 5.1E-13 1.7E-17 127.6 12.4 63 186-250 149-212 (381)
69 2gf3_A MSOX, monomeric sarcosi 99.4 7.7E-13 2.6E-17 126.9 13.4 142 107-250 3-208 (389)
70 2oln_A NIKD protein; flavoprot 99.4 3.7E-13 1.3E-17 129.8 11.2 62 186-249 148-210 (397)
71 3itj_A Thioredoxin reductase 1 99.4 2.6E-13 9E-18 127.3 9.2 119 105-248 20-143 (338)
72 1ryi_A Glycine oxidase; flavop 99.4 3.2E-13 1.1E-17 129.3 9.9 62 186-249 159-221 (382)
73 1vdc_A NTR, NADPH dependent th 99.4 1.9E-13 6.4E-18 128.5 8.0 117 107-249 8-126 (333)
74 1fl2_A Alkyl hydroperoxide red 99.4 5.5E-13 1.9E-17 123.9 9.8 143 108-279 2-154 (310)
75 3cp8_A TRNA uridine 5-carboxym 99.4 2.4E-12 8E-17 130.2 15.0 141 106-248 20-175 (641)
76 3cty_A Thioredoxin reductase; 99.4 6.8E-13 2.3E-17 124.0 10.3 112 107-248 16-127 (319)
77 2gjc_A Thiazole biosynthetic e 99.4 8.6E-13 2.9E-17 123.3 10.5 181 107-309 65-325 (326)
78 1hyu_A AHPF, alkyl hydroperoxi 99.4 1.6E-12 5.6E-17 130.0 12.3 145 106-279 211-365 (521)
79 3kkj_A Amine oxidase, flavin-c 99.4 2.1E-12 7.1E-17 115.8 11.7 36 107-142 2-37 (336)
80 2a87_A TRXR, TR, thioredoxin r 99.4 1.1E-12 3.7E-17 123.7 10.1 143 106-279 13-165 (335)
81 2yqu_A 2-oxoglutarate dehydrog 99.4 9.9E-12 3.4E-16 122.2 16.9 150 108-306 168-326 (455)
82 1ges_A Glutathione reductase; 99.4 9.9E-12 3.4E-16 122.1 16.7 151 108-306 168-327 (450)
83 1trb_A Thioredoxin reductase; 99.4 1.2E-12 4E-17 122.2 9.3 112 107-248 5-117 (320)
84 1d4d_A Flavocytochrome C fumar 99.4 1.1E-11 3.6E-16 125.5 16.8 144 106-249 125-319 (572)
85 2eq6_A Pyruvate dehydrogenase 99.3 2.5E-11 8.5E-16 119.7 17.8 149 108-305 170-332 (464)
86 3s5w_A L-ornithine 5-monooxyge 99.3 1.5E-12 5.3E-17 128.1 8.7 140 106-248 29-193 (463)
87 3c4n_A Uncharacterized protein 99.3 1.1E-12 3.7E-17 127.2 7.3 141 106-249 35-238 (405)
88 2vdc_G Glutamate synthase [NAD 99.3 2.8E-13 9.4E-18 133.3 2.4 150 44-249 70-221 (456)
89 2qcu_A Aerobic glycerol-3-phos 99.3 8.4E-12 2.9E-16 124.3 12.8 64 186-250 144-213 (501)
90 1v59_A Dihydrolipoamide dehydr 99.3 4.3E-11 1.5E-15 118.3 17.8 150 108-306 184-349 (478)
91 2r9z_A Glutathione amide reduc 99.3 3.8E-11 1.3E-15 118.4 17.1 149 108-305 167-325 (463)
92 3hyw_A Sulfide-quinone reducta 99.3 3.7E-12 1.3E-16 124.4 9.6 103 109-246 4-108 (430)
93 3da1_A Glycerol-3-phosphate de 99.3 4.4E-12 1.5E-16 128.0 10.1 64 186-249 165-234 (561)
94 4at0_A 3-ketosteroid-delta4-5a 99.3 2.3E-11 7.9E-16 121.4 15.1 57 192-248 203-265 (510)
95 3r9u_A Thioredoxin reductase; 99.3 4.7E-12 1.6E-16 117.6 9.2 112 106-247 3-118 (315)
96 1ebd_A E3BD, dihydrolipoamide 99.3 5.1E-11 1.7E-15 117.1 17.0 149 108-305 171-331 (455)
97 2hqm_A GR, grase, glutathione 99.3 5.9E-11 2E-15 117.5 16.8 150 108-305 186-345 (479)
98 3axb_A Putative oxidoreductase 99.3 8.4E-12 2.9E-16 122.3 10.5 64 186-250 176-257 (448)
99 1mo9_A ORF3; nucleotide bindin 99.3 7.5E-11 2.6E-15 118.0 17.5 150 108-305 215-376 (523)
100 2wdq_A Succinate dehydrogenase 99.3 6E-11 2.1E-15 120.3 16.9 144 106-249 6-208 (588)
101 1fec_A Trypanothione reductase 99.3 4.9E-11 1.7E-15 118.4 15.8 150 108-305 188-349 (490)
102 3fg2_P Putative rubredoxin red 99.3 3.6E-11 1.2E-15 116.4 14.5 155 108-305 143-308 (404)
103 2wpf_A Trypanothione reductase 99.3 6.2E-11 2.1E-15 117.8 16.2 150 108-305 192-353 (495)
104 3lxd_A FAD-dependent pyridine 99.3 5.3E-11 1.8E-15 115.6 15.2 156 108-305 153-319 (415)
105 3iwa_A FAD-dependent pyridine 99.3 4E-11 1.4E-15 118.4 14.3 155 108-305 160-327 (472)
106 3o0h_A Glutathione reductase; 99.3 8.3E-11 2.8E-15 116.5 16.5 150 108-306 192-350 (484)
107 3klj_A NAD(FAD)-dependent dehy 99.3 2.9E-12 9.9E-17 123.4 5.8 138 107-279 9-156 (385)
108 1pj5_A N,N-dimethylglycine oxi 99.3 2.7E-11 9.2E-16 127.8 13.7 65 185-250 145-210 (830)
109 1zmd_A Dihydrolipoyl dehydroge 99.3 1.3E-10 4.6E-15 114.7 17.8 150 108-305 179-343 (474)
110 3ntd_A FAD-dependent pyridine 99.3 5.9E-11 2E-15 119.8 15.4 155 108-305 152-336 (565)
111 1onf_A GR, grase, glutathione 99.3 1.5E-10 5.1E-15 115.2 17.9 129 108-279 177-314 (500)
112 1q1r_A Putidaredoxin reductase 99.3 7.2E-11 2.5E-15 115.3 15.3 155 108-305 150-317 (431)
113 4dna_A Probable glutathione re 99.3 1.1E-10 3.8E-15 115.0 16.7 149 108-305 171-329 (463)
114 1ojt_A Surface protein; redox- 99.3 6.5E-11 2.2E-15 117.2 15.2 150 108-306 186-348 (482)
115 1xdi_A RV3303C-LPDA; reductase 99.3 1.1E-10 3.7E-15 116.1 16.8 149 108-305 183-340 (499)
116 1nhp_A NADH peroxidase; oxidor 99.3 3.1E-11 1E-15 118.4 12.6 155 107-305 149-314 (447)
117 2v3a_A Rubredoxin reductase; a 99.3 1.1E-10 3.9E-15 112.0 16.2 153 108-305 146-304 (384)
118 2a8x_A Dihydrolipoyl dehydroge 99.2 1.5E-10 5E-15 114.1 17.1 149 108-305 172-332 (464)
119 2h88_A Succinate dehydrogenase 99.2 1E-10 3.5E-15 119.0 16.2 144 107-250 18-220 (621)
120 3cgb_A Pyridine nucleotide-dis 99.2 7.4E-11 2.5E-15 116.8 14.8 153 108-305 187-351 (480)
121 3vrd_B FCCB subunit, flavocyto 99.2 4.7E-11 1.6E-15 115.3 13.0 103 108-246 3-107 (401)
122 3urh_A Dihydrolipoyl dehydroge 99.2 2.4E-11 8.2E-16 120.6 11.2 170 106-279 24-208 (491)
123 2cdu_A NADPH oxidase; flavoenz 99.2 6.2E-11 2.1E-15 116.4 13.6 155 108-305 150-315 (452)
124 1trb_A Thioredoxin reductase; 99.2 2.9E-10 9.8E-15 105.9 17.4 154 108-311 146-316 (320)
125 2qae_A Lipoamide, dihydrolipoy 99.2 1.9E-10 6.7E-15 113.3 17.2 151 108-306 175-339 (468)
126 3l8k_A Dihydrolipoyl dehydroge 99.2 2.7E-11 9.1E-16 119.5 10.9 160 107-279 4-182 (466)
127 1chu_A Protein (L-aspartate ox 99.2 4E-11 1.4E-15 120.4 12.1 144 105-249 6-210 (540)
128 1dxl_A Dihydrolipoamide dehydr 99.2 1.3E-10 4.6E-15 114.5 15.7 150 108-306 178-341 (470)
129 2bc0_A NADH oxidase; flavoprot 99.2 9.6E-11 3.3E-15 116.3 14.2 154 108-305 195-359 (490)
130 3urh_A Dihydrolipoyl dehydroge 99.2 3.1E-10 1.1E-14 112.6 17.9 149 108-305 199-361 (491)
131 3dk9_A Grase, GR, glutathione 99.2 3.4E-10 1.2E-14 111.9 18.0 151 108-306 188-355 (478)
132 1lvl_A Dihydrolipoamide dehydr 99.2 1.1E-10 3.8E-15 114.9 14.3 146 108-305 172-328 (458)
133 3ef6_A Toluene 1,2-dioxygenase 99.2 7.5E-11 2.6E-15 114.4 12.8 154 108-305 144-307 (410)
134 3o0h_A Glutathione reductase; 99.2 2.6E-11 9E-16 120.2 9.8 167 106-279 25-201 (484)
135 2gqw_A Ferredoxin reductase; f 99.2 1.3E-10 4.3E-15 112.7 14.3 151 108-306 146-307 (408)
136 3oc4_A Oxidoreductase, pyridin 99.2 7.2E-11 2.5E-15 115.9 12.7 154 108-305 148-312 (452)
137 4eqs_A Coenzyme A disulfide re 99.2 6.2E-11 2.1E-15 116.0 12.1 150 108-305 148-309 (437)
138 4b1b_A TRXR, thioredoxin reduc 99.2 4.2E-11 1.4E-15 119.9 10.8 169 107-283 42-237 (542)
139 4b63_A L-ornithine N5 monooxyg 99.2 8.8E-12 3E-16 124.1 5.8 95 187-281 141-258 (501)
140 1v59_A Dihydrolipoamide dehydr 99.2 2E-11 6.9E-16 120.7 8.4 160 107-279 5-193 (478)
141 4g6h_A Rotenone-insensitive NA 99.2 1.9E-10 6.6E-15 114.4 15.5 153 108-307 218-399 (502)
142 2e5v_A L-aspartate oxidase; ar 99.2 1.1E-10 3.7E-15 115.4 13.5 141 109-250 1-179 (472)
143 1kf6_A Fumarate reductase flav 99.2 8.3E-11 2.8E-15 119.5 13.0 145 106-250 4-200 (602)
144 3ics_A Coenzyme A-disulfide re 99.2 1.5E-10 5.2E-15 117.4 15.0 152 108-305 188-351 (588)
145 3ic9_A Dihydrolipoamide dehydr 99.2 4.2E-10 1.4E-14 111.7 17.9 149 108-306 175-337 (492)
146 3lad_A Dihydrolipoamide dehydr 99.2 3.2E-10 1.1E-14 112.0 16.9 150 108-306 181-342 (476)
147 3qfa_A Thioredoxin reductase 1 99.2 1.3E-11 4.6E-16 123.4 6.8 169 106-279 31-220 (519)
148 3cty_A Thioredoxin reductase; 99.2 4.2E-10 1.4E-14 104.9 16.6 150 108-310 156-317 (319)
149 2qae_A Lipoamide, dihydrolipoy 99.2 1.2E-11 3.9E-16 122.2 6.2 165 107-279 2-184 (468)
150 2a8x_A Dihydrolipoyl dehydroge 99.2 5.9E-11 2E-15 117.0 11.3 165 107-279 3-181 (464)
151 1dxl_A Dihydrolipoamide dehydr 99.2 4.3E-11 1.5E-15 118.1 10.2 165 106-279 5-187 (470)
152 1ojt_A Surface protein; redox- 99.2 1.9E-11 6.6E-16 121.1 7.7 162 107-279 6-195 (482)
153 1zk7_A HGII, reductase, mercur 99.2 4.3E-10 1.5E-14 110.8 17.2 147 108-305 177-332 (467)
154 1zmd_A Dihydrolipoyl dehydroge 99.2 6.8E-11 2.3E-15 116.8 11.3 165 106-279 5-188 (474)
155 1zk7_A HGII, reductase, mercur 99.2 6.1E-11 2.1E-15 117.0 10.9 163 107-279 4-186 (467)
156 3dgz_A Thioredoxin reductase 2 99.2 1.2E-11 4.1E-16 122.7 5.9 170 106-279 5-195 (488)
157 3itj_A Thioredoxin reductase 1 99.2 5.2E-10 1.8E-14 104.7 16.8 150 108-310 174-336 (338)
158 3oc4_A Oxidoreductase, pyridin 99.2 4.2E-11 1.4E-15 117.6 9.4 140 108-279 3-157 (452)
159 3lad_A Dihydrolipoamide dehydr 99.2 2.8E-11 9.7E-16 119.6 8.0 169 107-279 3-190 (476)
160 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 3.9E-11 1.3E-15 113.2 8.4 127 108-245 2-163 (342)
161 1ebd_A E3BD, dihydrolipoamide 99.2 2.6E-11 9E-16 119.2 7.0 161 107-279 3-180 (455)
162 3kd9_A Coenzyme A disulfide re 99.2 4E-11 1.4E-15 117.6 8.2 106 107-247 3-114 (449)
163 1fl2_A Alkyl hydroperoxide red 99.2 9.3E-10 3.2E-14 102.0 16.9 151 108-311 145-307 (310)
164 3ka7_A Oxidoreductase; structu 99.2 1.8E-10 6.3E-15 111.7 12.4 56 191-247 196-252 (425)
165 2rgh_A Alpha-glycerophosphate 99.2 1.4E-10 4.8E-15 117.2 11.9 65 186-250 183-253 (571)
166 2bs2_A Quinol-fumarate reducta 99.2 3.2E-10 1.1E-14 116.2 14.5 59 190-248 157-221 (660)
167 3ab1_A Ferredoxin--NADP reduct 99.1 1.1E-09 3.8E-14 103.9 17.3 156 108-311 164-330 (360)
168 4b1b_A TRXR, thioredoxin reduc 99.1 1E-09 3.6E-14 109.8 17.5 149 108-305 224-382 (542)
169 4dna_A Probable glutathione re 99.1 1.4E-11 4.7E-16 121.5 3.8 167 106-279 4-180 (463)
170 4dgk_A Phytoene dehydrogenase; 99.1 4.2E-10 1.4E-14 111.6 14.6 56 191-246 221-277 (501)
171 2q0l_A TRXR, thioredoxin reduc 99.1 1.3E-09 4.5E-14 101.0 17.0 150 108-310 144-310 (311)
172 2bc0_A NADH oxidase; flavoprot 99.1 3E-11 1E-15 120.0 5.9 110 107-248 35-150 (490)
173 3fpz_A Thiazole biosynthetic e 99.1 3E-11 1E-15 113.4 5.6 37 107-143 65-103 (326)
174 3dgh_A TRXR-1, thioredoxin red 99.1 9.7E-10 3.3E-14 108.8 16.6 149 108-305 188-350 (483)
175 3ef6_A Toluene 1,2-dioxygenase 99.1 2.5E-11 8.5E-16 117.8 4.8 105 108-247 3-111 (410)
176 2zbw_A Thioredoxin reductase; 99.1 1.5E-09 5.2E-14 101.7 16.9 155 108-311 153-319 (335)
177 3ic9_A Dihydrolipoamide dehydr 99.1 3.6E-11 1.2E-15 119.4 6.0 158 106-279 7-184 (492)
178 3i6d_A Protoporphyrinogen oxid 99.1 2.8E-10 9.5E-15 111.7 11.8 41 206-247 248-289 (470)
179 1xhc_A NADH oxidase /nitrite r 99.1 6.7E-10 2.3E-14 106.1 14.1 146 108-305 144-295 (367)
180 3nrn_A Uncharacterized protein 99.1 4.3E-10 1.5E-14 109.2 13.0 54 191-247 189-243 (421)
181 3dk9_A Grase, GR, glutathione 99.1 2.2E-11 7.6E-16 120.4 3.9 168 106-279 19-197 (478)
182 1gte_A Dihydropyrimidine dehyd 99.1 1.1E-11 3.9E-16 133.2 1.7 154 45-246 128-286 (1025)
183 2yqu_A 2-oxoglutarate dehydrog 99.1 1.1E-10 3.8E-15 114.6 8.7 160 108-279 2-177 (455)
184 3r9u_A Thioredoxin reductase; 99.1 2.3E-09 7.7E-14 99.3 17.1 151 108-310 148-313 (315)
185 3cgb_A Pyridine nucleotide-dis 99.1 6.9E-11 2.4E-15 117.0 7.0 109 108-248 37-153 (480)
186 3gyx_A Adenylylsulfate reducta 99.1 4.7E-10 1.6E-14 114.9 13.0 62 188-249 163-235 (662)
187 3dgz_A Thioredoxin reductase 2 99.1 2.6E-09 9E-14 105.8 18.1 150 108-305 186-350 (488)
188 3kd9_A Coenzyme A disulfide re 99.1 6.5E-10 2.2E-14 109.0 13.5 153 108-305 149-313 (449)
189 3f8d_A Thioredoxin reductase ( 99.1 1.8E-09 6.1E-14 100.2 15.9 151 108-311 155-319 (323)
190 2q7v_A Thioredoxin reductase; 99.1 1.9E-09 6.5E-14 100.7 16.0 150 108-311 153-314 (325)
191 1m6i_A Programmed cell death p 99.1 6.7E-10 2.3E-14 110.3 13.5 154 108-305 181-350 (493)
192 3ics_A Coenzyme A-disulfide re 99.1 1.3E-10 4.5E-15 117.9 8.3 111 106-247 35-152 (588)
193 1jnr_A Adenylylsulfate reducta 99.1 1.3E-09 4.5E-14 111.6 15.6 143 107-249 22-220 (643)
194 3dgh_A TRXR-1, thioredoxin red 99.1 1.6E-10 5.3E-15 114.5 8.5 169 106-279 8-197 (483)
195 1xhc_A NADH oxidase /nitrite r 99.1 7.6E-11 2.6E-15 112.7 6.1 104 108-247 9-113 (367)
196 1lvl_A Dihydrolipoamide dehydr 99.1 1.6E-09 5.4E-14 106.6 15.2 159 106-279 4-181 (458)
197 1q1r_A Putidaredoxin reductase 99.1 9.5E-11 3.2E-15 114.4 6.4 109 107-248 4-115 (431)
198 3sx6_A Sulfide-quinone reducta 99.1 9.4E-11 3.2E-15 114.6 6.3 106 108-248 5-113 (437)
199 2hqm_A GR, grase, glutathione 99.1 1.9E-10 6.5E-15 113.8 8.4 167 106-279 10-195 (479)
200 3lxd_A FAD-dependent pyridine 99.1 1E-10 3.5E-15 113.5 6.0 109 106-248 8-120 (415)
201 1xdi_A RV3303C-LPDA; reductase 99.1 3E-10 1E-14 112.9 9.1 168 107-279 2-192 (499)
202 3ntd_A FAD-dependent pyridine 99.0 2.1E-10 7.3E-15 115.7 7.7 109 108-247 2-117 (565)
203 1fec_A Trypanothione reductase 99.0 3.2E-10 1.1E-14 112.5 8.2 31 107-137 3-34 (490)
204 2r9z_A Glutathione amide reduc 99.0 2.6E-10 8.8E-15 112.4 7.4 159 107-279 4-176 (463)
205 3fbs_A Oxidoreductase; structu 99.0 1.8E-09 6.1E-14 99.1 12.5 144 108-311 142-294 (297)
206 3d1c_A Flavin-containing putat 99.0 5.4E-09 1.8E-13 99.2 16.3 164 108-309 167-339 (369)
207 1vdc_A NTR, NADPH dependent th 99.0 6E-09 2.1E-13 97.5 16.2 151 108-311 160-325 (333)
208 2v3a_A Rubredoxin reductase; a 99.0 9.8E-11 3.3E-15 112.5 4.0 107 107-248 4-114 (384)
209 1onf_A GR, grase, glutathione 99.0 1.8E-10 6.2E-15 114.6 5.5 34 107-140 2-35 (500)
210 1ges_A Glutathione reductase; 99.0 3.6E-10 1.2E-14 110.9 7.5 160 107-279 4-177 (450)
211 3lzw_A Ferredoxin--NADP reduct 99.0 3.5E-09 1.2E-13 98.7 13.9 151 108-311 155-317 (332)
212 2eq6_A Pyruvate dehydrogenase 99.0 7.9E-10 2.7E-14 108.9 9.8 158 107-279 6-179 (464)
213 2wpf_A Trypanothione reductase 99.0 1.6E-10 5.5E-15 114.8 4.4 31 107-137 7-38 (495)
214 2x8g_A Thioredoxin glutathione 99.0 3.5E-10 1.2E-14 114.9 7.0 34 106-139 106-139 (598)
215 3l8k_A Dihydrolipoyl dehydroge 99.0 5.5E-09 1.9E-13 102.9 15.3 147 108-306 173-332 (466)
216 3g3e_A D-amino-acid oxidase; F 99.0 2.5E-10 8.4E-15 108.1 5.1 53 186-250 137-189 (351)
217 1c0p_A D-amino acid oxidase; a 99.0 3.5E-10 1.2E-14 107.5 6.0 132 107-251 6-189 (363)
218 1nhp_A NADH peroxidase; oxidor 99.0 5.7E-10 1.9E-14 109.4 7.5 109 108-248 1-116 (447)
219 3h28_A Sulfide-quinone reducta 99.0 1.5E-10 5.2E-15 112.9 3.3 105 108-247 3-109 (430)
220 3qfa_A Thioredoxin reductase 1 99.0 1.6E-08 5.3E-13 101.1 17.9 150 108-305 211-378 (519)
221 2cdu_A NADPH oxidase; flavoenz 99.0 5.3E-10 1.8E-14 109.7 7.1 111 108-248 1-118 (452)
222 2x8g_A Thioredoxin glutathione 99.0 1.8E-08 6.2E-13 102.3 18.6 151 108-306 287-458 (598)
223 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.6E-09 5.3E-14 105.4 10.3 42 202-245 215-257 (431)
224 2gqw_A Ferredoxin reductase; f 99.0 5.3E-10 1.8E-14 108.3 6.6 104 107-248 7-114 (408)
225 3fg2_P Putative rubredoxin red 99.0 5.6E-10 1.9E-14 108.0 6.7 106 108-247 2-110 (404)
226 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.1E-08 3.8E-13 102.2 16.1 150 108-310 356-517 (521)
227 3nks_A Protoporphyrinogen oxid 99.0 3.2E-09 1.1E-13 104.5 12.0 55 192-247 235-290 (477)
228 1mo9_A ORF3; nucleotide bindin 99.0 1.6E-09 5.5E-14 108.3 9.7 159 106-279 42-224 (523)
229 3h8l_A NADH oxidase; membrane 98.9 2.7E-10 9.3E-15 110.2 3.9 105 108-247 2-113 (409)
230 4gde_A UDP-galactopyranose mut 98.9 1.3E-09 4.4E-14 108.3 8.7 51 191-244 222-273 (513)
231 2gag_A Heterotetrameric sarcos 98.9 3.7E-09 1.3E-13 113.0 12.6 109 107-247 128-253 (965)
232 2a87_A TRXR, TR, thioredoxin r 98.9 8.9E-09 3E-13 96.6 13.7 150 108-310 156-317 (335)
233 4eqs_A Coenzyme A disulfide re 98.9 9.1E-10 3.1E-14 107.7 7.1 140 109-279 2-157 (437)
234 3iwa_A FAD-dependent pyridine 98.9 1.8E-09 6.2E-14 106.5 9.0 116 108-247 4-125 (472)
235 2ivd_A PPO, PPOX, protoporphyr 98.9 6.9E-09 2.3E-13 102.2 12.2 37 107-143 16-52 (478)
236 2vvm_A Monoamine oxidase N; FA 98.9 1.1E-08 3.8E-13 101.2 13.4 55 192-247 256-312 (495)
237 3klj_A NAD(FAD)-dependent dehy 98.9 1.7E-09 5.7E-14 104.0 6.8 141 108-305 147-292 (385)
238 1lqt_A FPRA; NADP+ derivative, 98.9 1.7E-10 6E-15 113.3 -0.1 98 107-247 3-108 (456)
239 1y56_A Hypothetical protein PH 98.9 3.7E-09 1.3E-13 104.9 8.8 109 106-247 107-219 (493)
240 3k30_A Histamine dehydrogenase 98.9 7.6E-10 2.6E-14 114.4 3.8 98 105-247 389-488 (690)
241 3lov_A Protoporphyrinogen oxid 98.9 1.7E-08 5.8E-13 99.4 13.3 40 206-247 249-289 (475)
242 1s3e_A Amine oxidase [flavin-c 98.8 1.5E-08 5.2E-13 101.0 12.3 43 204-247 225-268 (520)
243 1m6i_A Programmed cell death p 98.8 1.7E-09 6E-14 107.3 4.7 130 106-248 10-145 (493)
244 1ps9_A 2,4-dienoyl-COA reducta 98.8 1.9E-09 6.5E-14 111.0 4.6 127 105-279 371-504 (671)
245 4g6h_A Rotenone-insensitive NA 98.8 4.5E-09 1.6E-13 104.5 6.5 110 107-249 42-171 (502)
246 2yg5_A Putrescine oxidase; oxi 98.8 4.1E-08 1.4E-12 95.9 13.1 37 106-142 4-40 (453)
247 2vdc_G Glutamate synthase [NAD 98.8 2.4E-08 8.4E-13 98.0 11.5 151 107-310 264-445 (456)
248 3h8l_A NADH oxidase; membrane 98.8 8E-08 2.7E-12 92.8 14.6 112 192-311 219-338 (409)
249 3h28_A Sulfide-quinone reducta 98.8 8E-08 2.7E-12 93.5 14.2 114 193-312 202-336 (430)
250 1cjc_A Protein (adrenodoxin re 98.8 1E-09 3.5E-14 108.0 0.5 98 107-247 6-106 (460)
251 3s5w_A L-ornithine 5-monooxyge 98.7 1.2E-07 4E-12 93.0 15.0 189 107-308 227-448 (463)
252 3sx6_A Sulfide-quinone reducta 98.7 9.6E-08 3.3E-12 93.2 14.2 158 109-312 151-347 (437)
253 3p1w_A Rabgdi protein; GDI RAB 98.7 8.3E-08 2.8E-12 94.2 13.1 56 191-246 256-313 (475)
254 1gte_A Dihydropyrimidine dehyd 98.7 3.6E-07 1.2E-11 98.2 18.0 149 109-309 334-508 (1025)
255 1o94_A Tmadh, trimethylamine d 98.7 7.5E-09 2.6E-13 107.5 4.3 39 105-143 387-425 (729)
256 4gut_A Lysine-specific histone 98.7 1E-07 3.5E-12 99.2 12.7 41 204-245 542-583 (776)
257 4a9w_A Monooxygenase; baeyer-v 98.7 9.9E-08 3.4E-12 89.5 10.9 180 108-310 164-353 (357)
258 3g5s_A Methylenetetrahydrofola 98.7 2.8E-08 9.7E-13 94.2 6.9 110 108-246 2-136 (443)
259 2gag_A Heterotetrameric sarcos 98.6 1.6E-07 5.6E-12 100.3 12.4 143 108-309 285-444 (965)
260 1cjc_A Protein (adrenodoxin re 98.6 5E-07 1.7E-11 88.7 13.5 189 108-311 146-397 (460)
261 3k30_A Histamine dehydrogenase 98.6 2.1E-08 7.2E-13 103.6 3.4 148 108-311 524-677 (690)
262 1b37_A Protein (polyamine oxid 98.5 6.1E-07 2.1E-11 88.2 11.6 54 192-246 207-269 (472)
263 1lqt_A FPRA; NADP+ derivative, 98.4 1.4E-06 4.7E-11 85.5 12.7 188 108-310 148-388 (456)
264 1ps9_A 2,4-dienoyl-COA reducta 98.4 1.2E-06 4E-11 90.2 11.2 162 108-304 495-671 (671)
265 3q9t_A Choline dehydrogenase a 98.3 5.6E-06 1.9E-10 83.4 13.7 36 106-141 5-41 (577)
266 2bcg_G Secretory pathway GDP d 98.2 9.1E-07 3.1E-11 86.7 6.0 58 192-250 243-303 (453)
267 1o94_A Tmadh, trimethylamine d 98.2 2.2E-06 7.4E-11 89.0 8.7 148 108-309 529-700 (729)
268 2e1m_A L-glutamate oxidase; L- 98.2 1.5E-06 5.2E-11 82.8 6.5 38 106-143 43-81 (376)
269 2xve_A Flavin-containing monoo 98.2 9.5E-06 3.2E-10 79.7 12.1 130 108-304 198-336 (464)
270 2b9w_A Putative aminooxidase; 98.2 1.6E-06 5.6E-11 83.7 6.2 37 106-142 5-42 (424)
271 3hdq_A UDP-galactopyranose mut 98.2 1.7E-06 6E-11 83.0 6.0 37 106-142 28-64 (397)
272 1rsg_A FMS1 protein; FAD bindi 98.2 1.2E-06 4.2E-11 87.1 5.1 37 107-143 8-45 (516)
273 3gwf_A Cyclohexanone monooxyge 98.2 1.4E-05 4.6E-10 80.1 12.5 100 203-312 342-460 (540)
274 2gv8_A Monooxygenase; FMO, FAD 98.1 2.2E-05 7.5E-10 76.5 13.6 129 108-305 213-358 (447)
275 2jae_A L-amino acid oxidase; o 98.1 2.1E-06 7.1E-11 84.7 6.4 37 106-142 10-46 (489)
276 1v0j_A UDP-galactopyranose mut 98.1 2.2E-06 7.6E-11 82.5 5.6 35 107-141 7-42 (399)
277 1i8t_A UDP-galactopyranose mut 98.0 3E-06 1E-10 80.6 4.9 35 108-142 2-36 (367)
278 1sez_A Protoporphyrinogen oxid 98.0 4.2E-06 1.4E-10 82.8 5.2 37 107-143 13-49 (504)
279 2iid_A L-amino-acid oxidase; f 98.0 5.6E-06 1.9E-10 81.8 5.7 36 107-142 33-68 (498)
280 1y56_A Hypothetical protein PH 97.9 2.5E-05 8.5E-10 77.2 9.4 101 200-308 266-376 (493)
281 4dsg_A UDP-galactopyranose mut 97.9 7E-06 2.4E-10 81.1 5.4 37 106-142 8-45 (484)
282 1d5t_A Guanine nucleotide diss 97.9 1E-05 3.5E-10 78.7 6.4 59 191-250 234-293 (433)
283 3pl8_A Pyranose 2-oxidase; sub 97.9 7.4E-06 2.5E-10 83.4 5.5 37 107-143 46-82 (623)
284 2bi7_A UDP-galactopyranose mut 97.9 6.8E-06 2.3E-10 78.7 4.8 36 107-142 3-38 (384)
285 1kdg_A CDH, cellobiose dehydro 97.9 1.1E-05 3.7E-10 80.9 5.3 35 106-140 6-40 (546)
286 3uox_A Otemo; baeyer-villiger 97.8 5.2E-05 1.8E-09 75.9 9.8 35 107-141 185-219 (545)
287 4a5l_A Thioredoxin reductase; 97.8 0.00016 5.4E-09 66.4 12.1 150 108-310 153-313 (314)
288 3t37_A Probable dehydrogenase; 97.8 1.3E-05 4.3E-10 79.8 4.2 35 106-140 16-51 (526)
289 2z3y_A Lysine-specific histone 97.7 3.3E-05 1.1E-09 79.2 5.8 37 106-142 106-142 (662)
290 1ju2_A HydroxynitrIle lyase; f 97.6 2.1E-05 7.2E-10 78.6 3.4 35 106-141 25-59 (536)
291 2xag_A Lysine-specific histone 97.6 4.8E-05 1.6E-09 79.8 6.0 37 106-142 277-313 (852)
292 3qvp_A Glucose oxidase; oxidor 97.6 3.9E-05 1.3E-09 77.2 4.7 35 106-140 18-53 (583)
293 4ap3_A Steroid monooxygenase; 97.6 0.00015 5.2E-09 72.6 8.3 36 107-142 191-226 (549)
294 1n4w_A CHOD, cholesterol oxida 97.5 7.1E-05 2.4E-09 74.2 5.1 35 106-140 4-38 (504)
295 4gcm_A TRXR, thioredoxin reduc 97.5 0.00041 1.4E-08 63.8 9.9 151 108-310 146-307 (312)
296 1coy_A Cholesterol oxidase; ox 97.5 0.0001 3.5E-09 73.1 5.6 35 106-140 10-44 (507)
297 1gpe_A Protein (glucose oxidas 97.4 7.7E-05 2.6E-09 75.3 4.4 36 105-140 22-58 (587)
298 3fim_B ARYL-alcohol oxidase; A 97.4 5.2E-05 1.8E-09 76.1 2.7 34 107-140 2-36 (566)
299 2jbv_A Choline oxidase; alcoho 97.4 0.00011 3.8E-09 73.6 4.9 35 106-140 12-47 (546)
300 3ayj_A Pro-enzyme of L-phenyla 97.3 0.00012 4.1E-09 75.1 3.9 36 107-142 56-100 (721)
301 4fk1_A Putative thioredoxin re 97.3 0.00024 8.2E-09 65.2 5.4 148 108-310 147-301 (304)
302 1vg0_A RAB proteins geranylger 97.1 0.00061 2.1E-08 69.0 6.4 40 107-146 8-47 (650)
303 1w4x_A Phenylacetone monooxyge 97.1 0.003 1E-07 63.0 11.4 105 198-312 345-469 (542)
304 4b63_A L-ornithine N5 monooxyg 96.6 0.049 1.7E-06 53.6 15.9 34 108-141 247-282 (501)
305 2g1u_A Hypothetical protein TM 96.3 0.0037 1.3E-07 51.2 4.7 34 107-140 19-52 (155)
306 3fwz_A Inner membrane protein 96.2 0.0063 2.2E-07 49.0 5.7 33 108-140 8-40 (140)
307 1lss_A TRK system potassium up 96.2 0.0041 1.4E-07 49.5 4.5 32 108-139 5-36 (140)
308 3llv_A Exopolyphosphatase-rela 95.9 0.0079 2.7E-07 48.2 4.7 33 108-140 7-39 (141)
309 3hyw_A Sulfide-quinone reducta 95.8 0.038 1.3E-06 53.2 9.7 114 193-312 202-336 (430)
310 3ic5_A Putative saccharopine d 95.7 0.01 3.4E-07 45.6 4.3 33 108-140 6-39 (118)
311 1id1_A Putative potassium chan 95.7 0.013 4.4E-07 47.8 5.2 32 108-139 4-35 (153)
312 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.014 4.8E-07 53.4 5.5 33 108-140 16-48 (302)
313 3vrd_B FCCB subunit, flavocyto 95.2 0.01 3.4E-07 56.5 3.5 116 193-312 204-327 (401)
314 2hmt_A YUAA protein; RCK, KTN, 95.2 0.016 5.4E-07 46.2 4.1 31 109-139 8-38 (144)
315 3c85_A Putative glutathione-re 95.1 0.017 5.7E-07 48.6 4.2 33 108-140 40-73 (183)
316 3l4b_C TRKA K+ channel protien 95.0 0.019 6.7E-07 49.7 4.3 32 109-140 2-33 (218)
317 3ado_A Lambda-crystallin; L-gu 94.9 0.026 8.9E-07 52.1 5.1 33 108-140 7-39 (319)
318 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.033 1.1E-06 48.7 4.9 33 107-139 31-63 (223)
319 1pzg_A LDH, lactate dehydrogen 94.3 0.044 1.5E-06 50.9 5.2 34 107-140 9-43 (331)
320 4e12_A Diketoreductase; oxidor 94.3 0.041 1.4E-06 49.8 4.9 33 108-140 5-37 (283)
321 3i83_A 2-dehydropantoate 2-red 94.3 0.044 1.5E-06 50.5 5.2 33 108-140 3-35 (320)
322 3k96_A Glycerol-3-phosphate de 94.2 0.052 1.8E-06 51.0 5.4 34 107-140 29-62 (356)
323 4dio_A NAD(P) transhydrogenase 94.1 0.051 1.8E-06 51.7 5.3 34 107-140 190-223 (405)
324 1jw9_B Molybdopterin biosynthe 94.1 0.044 1.5E-06 48.7 4.6 33 108-140 32-65 (249)
325 2bcg_G Secretory pathway GDP d 94.1 0.061 2.1E-06 52.1 5.9 38 106-143 10-47 (453)
326 1ks9_A KPA reductase;, 2-dehyd 94.0 0.054 1.8E-06 48.8 5.1 33 109-141 2-34 (291)
327 1lld_A L-lactate dehydrogenase 94.0 0.052 1.8E-06 49.9 5.1 32 108-139 8-41 (319)
328 2dpo_A L-gulonate 3-dehydrogen 93.9 0.058 2E-06 49.8 5.1 33 108-140 7-39 (319)
329 2raf_A Putative dinucleotide-b 93.9 0.07 2.4E-06 45.9 5.4 34 108-141 20-53 (209)
330 2y0c_A BCEC, UDP-glucose dehyd 93.9 0.055 1.9E-06 52.9 5.1 34 107-140 8-41 (478)
331 2ew2_A 2-dehydropantoate 2-red 93.8 0.06 2.1E-06 49.0 5.0 32 108-139 4-35 (316)
332 3ghy_A Ketopantoate reductase 93.8 0.066 2.3E-06 49.7 5.4 32 108-139 4-35 (335)
333 3hn2_A 2-dehydropantoate 2-red 93.8 0.053 1.8E-06 49.8 4.6 33 108-140 3-35 (312)
334 4g65_A TRK system potassium up 93.8 0.024 8.4E-07 55.2 2.4 34 107-140 3-36 (461)
335 1kyq_A Met8P, siroheme biosynt 93.8 0.03 1E-06 50.5 2.8 32 108-139 14-45 (274)
336 3g0o_A 3-hydroxyisobutyrate de 93.7 0.066 2.3E-06 48.9 5.1 33 108-140 8-40 (303)
337 3vtf_A UDP-glucose 6-dehydroge 93.7 0.072 2.5E-06 51.4 5.5 36 105-140 19-54 (444)
338 3p2y_A Alanine dehydrogenase/p 93.5 0.061 2.1E-06 50.8 4.6 34 107-140 184-217 (381)
339 3lk7_A UDP-N-acetylmuramoylala 93.5 0.058 2E-06 52.3 4.6 33 108-140 10-42 (451)
340 2x5o_A UDP-N-acetylmuramoylala 93.5 0.045 1.5E-06 52.9 3.7 33 108-140 6-38 (439)
341 3pid_A UDP-glucose 6-dehydroge 93.4 0.07 2.4E-06 51.3 4.9 34 106-140 35-68 (432)
342 3tl2_A Malate dehydrogenase; c 93.3 0.095 3.2E-06 48.3 5.4 33 107-139 8-41 (315)
343 3gg2_A Sugar dehydrogenase, UD 93.3 0.077 2.6E-06 51.4 5.0 33 108-140 3-35 (450)
344 2qyt_A 2-dehydropantoate 2-red 93.3 0.059 2E-06 49.2 4.0 31 108-138 9-45 (317)
345 3l9w_A Glutathione-regulated p 93.1 0.082 2.8E-06 50.7 4.9 33 108-140 5-37 (413)
346 2v6b_A L-LDH, L-lactate dehydr 93.1 0.091 3.1E-06 48.1 5.0 32 109-140 2-35 (304)
347 3l6d_A Putative oxidoreductase 93.1 0.14 4.9E-06 46.8 6.3 34 107-140 9-42 (306)
348 3doj_A AT3G25530, dehydrogenas 93.1 0.1 3.5E-06 47.8 5.3 34 108-141 22-55 (310)
349 1y6j_A L-lactate dehydrogenase 93.0 0.1 3.6E-06 48.1 5.3 34 107-140 7-42 (318)
350 3k6j_A Protein F01G10.3, confi 93.0 0.11 3.9E-06 50.3 5.7 34 108-141 55-88 (460)
351 1x13_A NAD(P) transhydrogenase 92.9 0.094 3.2E-06 50.0 5.0 33 108-140 173-205 (401)
352 1d5t_A Guanine nucleotide diss 92.9 0.074 2.5E-06 51.2 4.3 35 107-141 6-40 (433)
353 1l7d_A Nicotinamide nucleotide 92.9 0.098 3.4E-06 49.6 5.1 33 108-140 173-205 (384)
354 1bg6_A N-(1-D-carboxylethyl)-L 92.9 0.1 3.5E-06 48.6 5.1 32 108-139 5-36 (359)
355 3g17_A Similar to 2-dehydropan 92.9 0.065 2.2E-06 48.7 3.7 33 108-140 3-35 (294)
356 2ewd_A Lactate dehydrogenase,; 92.8 0.1 3.5E-06 48.0 5.0 33 108-140 5-38 (317)
357 2hjr_A Malate dehydrogenase; m 92.8 0.12 4.1E-06 47.9 5.4 33 108-140 15-48 (328)
358 3g79_A NDP-N-acetyl-D-galactos 92.8 0.1 3.5E-06 50.9 5.1 34 108-141 19-54 (478)
359 3pqe_A L-LDH, L-lactate dehydr 92.8 0.11 3.9E-06 48.0 5.1 33 107-139 5-39 (326)
360 3mog_A Probable 3-hydroxybutyr 92.8 0.12 4E-06 50.6 5.5 33 108-140 6-38 (483)
361 3oj0_A Glutr, glutamyl-tRNA re 92.7 0.035 1.2E-06 44.6 1.4 32 108-139 22-53 (144)
362 3hwr_A 2-dehydropantoate 2-red 92.7 0.11 3.8E-06 47.8 5.0 31 108-139 20-50 (318)
363 1zcj_A Peroxisomal bifunctiona 92.7 0.12 4.2E-06 50.2 5.4 33 108-140 38-70 (463)
364 4a7p_A UDP-glucose dehydrogena 92.6 0.12 4.2E-06 49.9 5.4 35 107-141 8-42 (446)
365 1zej_A HBD-9, 3-hydroxyacyl-CO 92.6 0.12 4E-06 47.1 4.9 33 107-140 12-44 (293)
366 1z82_A Glycerol-3-phosphate de 92.6 0.12 4.1E-06 47.8 5.1 32 108-139 15-46 (335)
367 1pjc_A Protein (L-alanine dehy 92.6 0.096 3.3E-06 49.2 4.5 32 108-139 168-199 (361)
368 1mv8_A GMD, GDP-mannose 6-dehy 92.5 0.094 3.2E-06 50.6 4.4 32 109-140 2-33 (436)
369 3eag_A UDP-N-acetylmuramate:L- 92.5 0.098 3.4E-06 48.4 4.4 33 108-140 5-38 (326)
370 3pef_A 6-phosphogluconate dehy 92.5 0.12 4.1E-06 46.6 4.9 34 108-141 2-35 (287)
371 3h8v_A Ubiquitin-like modifier 92.4 0.12 4E-06 47.0 4.7 33 108-140 37-70 (292)
372 3ego_A Probable 2-dehydropanto 92.3 0.13 4.5E-06 47.0 4.9 32 108-140 3-34 (307)
373 2uyy_A N-PAC protein; long-cha 92.3 0.19 6.4E-06 46.0 6.0 33 108-140 31-63 (316)
374 1txg_A Glycerol-3-phosphate de 92.3 0.11 3.9E-06 47.7 4.5 30 109-138 2-31 (335)
375 3dtt_A NADP oxidoreductase; st 92.2 0.13 4.5E-06 45.3 4.6 34 107-140 19-52 (245)
376 1guz_A Malate dehydrogenase; o 92.2 0.15 5E-06 46.9 5.1 32 109-140 2-35 (310)
377 1t2d_A LDH-P, L-lactate dehydr 92.2 0.17 5.7E-06 46.8 5.4 33 108-140 5-38 (322)
378 3ggo_A Prephenate dehydrogenas 92.1 0.19 6.4E-06 46.2 5.7 33 108-140 34-68 (314)
379 4dll_A 2-hydroxy-3-oxopropiona 92.1 0.13 4.5E-06 47.3 4.7 34 107-140 31-64 (320)
380 2vns_A Metalloreductase steap3 92.1 0.15 5.1E-06 44.0 4.7 32 108-139 29-60 (215)
381 3dfu_A Uncharacterized protein 92.1 0.051 1.7E-06 47.7 1.7 33 107-139 6-38 (232)
382 2a9f_A Putative malic enzyme ( 92.0 0.12 4.1E-06 48.8 4.3 33 107-139 188-221 (398)
383 3rui_A Ubiquitin-like modifier 92.0 0.16 5.6E-06 47.0 5.2 33 108-140 35-68 (340)
384 1nyt_A Shikimate 5-dehydrogena 92.0 0.16 5.5E-06 45.6 5.0 32 108-139 120-151 (271)
385 2eez_A Alanine dehydrogenase; 91.9 0.13 4.6E-06 48.3 4.5 32 108-139 167-198 (369)
386 1zud_1 Adenylyltransferase THI 91.7 0.15 5.3E-06 45.2 4.5 33 108-140 29-62 (251)
387 3qha_A Putative oxidoreductase 91.7 0.13 4.6E-06 46.7 4.2 34 108-141 16-49 (296)
388 4ffl_A PYLC; amino acid, biosy 91.7 0.15 5.1E-06 47.6 4.6 33 109-141 3-35 (363)
389 1a5z_A L-lactate dehydrogenase 91.7 0.15 5.2E-06 46.9 4.5 31 109-139 2-34 (319)
390 2f1k_A Prephenate dehydrogenas 91.6 0.19 6.3E-06 45.1 5.0 32 109-140 2-33 (279)
391 3gvi_A Malate dehydrogenase; N 91.6 0.2 7E-06 46.2 5.3 33 108-140 8-41 (324)
392 3ktd_A Prephenate dehydrogenas 91.6 0.23 7.7E-06 46.3 5.6 33 108-140 9-41 (341)
393 4huj_A Uncharacterized protein 91.6 0.14 4.6E-06 44.4 3.9 33 108-140 24-57 (220)
394 3phh_A Shikimate dehydrogenase 91.5 0.21 7.2E-06 44.8 5.2 33 108-140 119-151 (269)
395 3qsg_A NAD-binding phosphogluc 91.5 0.16 5.4E-06 46.6 4.5 33 107-139 24-57 (312)
396 2vhw_A Alanine dehydrogenase; 91.4 0.16 5.4E-06 48.0 4.5 32 108-139 169-200 (377)
397 3pdu_A 3-hydroxyisobutyrate de 91.4 0.14 4.7E-06 46.3 3.9 33 109-141 3-35 (287)
398 3c24_A Putative oxidoreductase 91.3 0.25 8.6E-06 44.5 5.6 32 108-139 12-44 (286)
399 2h78_A Hibadh, 3-hydroxyisobut 91.3 0.17 5.8E-06 46.0 4.4 33 108-140 4-36 (302)
400 1dlj_A UDP-glucose dehydrogena 91.3 0.15 5.1E-06 48.6 4.2 31 109-140 2-32 (402)
401 1oju_A MDH, malate dehydrogena 91.2 0.18 6.3E-06 45.8 4.5 32 109-140 2-35 (294)
402 1jay_A Coenzyme F420H2:NADP+ o 91.1 0.18 6.3E-06 43.0 4.3 31 109-139 2-33 (212)
403 1vl6_A Malate oxidoreductase; 91.1 0.17 5.9E-06 47.6 4.3 33 107-139 192-225 (388)
404 2pv7_A T-protein [includes: ch 91.1 0.23 7.9E-06 45.1 5.1 33 108-140 22-55 (298)
405 4e21_A 6-phosphogluconate dehy 91.1 0.23 7.7E-06 46.6 5.1 33 108-140 23-55 (358)
406 3ond_A Adenosylhomocysteinase; 91.1 0.21 7.3E-06 48.6 5.0 32 108-139 266-297 (488)
407 1ur5_A Malate dehydrogenase; o 91.0 0.23 7.9E-06 45.5 5.1 33 108-140 3-36 (309)
408 4gwg_A 6-phosphogluconate dehy 90.9 0.26 8.9E-06 48.1 5.6 33 108-140 5-37 (484)
409 1yqg_A Pyrroline-5-carboxylate 90.9 0.21 7.1E-06 44.2 4.6 32 109-140 2-34 (263)
410 1pjq_A CYSG, siroheme synthase 90.9 0.18 6E-06 49.0 4.3 32 108-139 13-44 (457)
411 3p7m_A Malate dehydrogenase; p 90.9 0.28 9.4E-06 45.3 5.4 33 108-140 6-39 (321)
412 2rcy_A Pyrroline carboxylate r 90.8 0.27 9.3E-06 43.4 5.3 34 108-141 5-42 (262)
413 1evy_A Glycerol-3-phosphate de 90.8 0.13 4.4E-06 48.2 3.2 31 109-139 17-47 (366)
414 2egg_A AROE, shikimate 5-dehyd 90.8 0.22 7.6E-06 45.3 4.7 32 108-139 142-174 (297)
415 3ldh_A Lactate dehydrogenase; 90.7 0.34 1.2E-05 44.7 5.9 33 107-139 21-55 (330)
416 2aef_A Calcium-gated potassium 90.7 0.095 3.2E-06 45.7 2.1 32 108-140 10-41 (234)
417 2gf2_A Hibadh, 3-hydroxyisobut 90.7 0.23 7.9E-06 44.8 4.7 32 109-140 2-33 (296)
418 1hyh_A L-hicdh, L-2-hydroxyiso 90.6 0.22 7.4E-06 45.6 4.5 32 109-140 3-36 (309)
419 1vpd_A Tartronate semialdehyde 90.5 0.22 7.5E-06 45.0 4.4 33 108-140 6-38 (299)
420 2g5c_A Prephenate dehydrogenas 90.5 0.27 9.3E-06 44.0 5.0 32 109-140 3-36 (281)
421 4ezb_A Uncharacterized conserv 90.4 0.23 7.9E-06 45.6 4.5 33 108-140 25-58 (317)
422 3d1l_A Putative NADP oxidoredu 90.4 0.26 8.9E-06 43.8 4.7 33 108-140 11-44 (266)
423 3h5n_A MCCB protein; ubiquitin 90.3 0.22 7.4E-06 46.6 4.2 33 108-140 119-152 (353)
424 3nep_X Malate dehydrogenase; h 90.2 0.26 9.1E-06 45.2 4.7 32 109-140 2-35 (314)
425 2zyd_A 6-phosphogluconate dehy 90.2 0.28 9.7E-06 47.9 5.1 34 107-140 15-48 (480)
426 2i6t_A Ubiquitin-conjugating e 90.1 0.28 9.6E-06 44.8 4.7 33 108-140 15-49 (303)
427 3d0o_A L-LDH 1, L-lactate dehy 90.1 0.29 1E-05 45.0 4.9 32 108-139 7-40 (317)
428 1y8q_A Ubiquitin-like 1 activa 90.0 0.34 1.2E-05 45.1 5.3 33 108-140 37-70 (346)
429 2wtb_A MFP2, fatty acid multif 90.0 0.26 9E-06 50.7 4.9 33 108-140 313-345 (725)
430 4gsl_A Ubiquitin-like modifier 90.0 0.31 1E-05 48.7 5.2 34 107-140 326-360 (615)
431 3vku_A L-LDH, L-lactate dehydr 90.0 0.31 1.1E-05 45.0 4.9 32 108-139 10-43 (326)
432 2pgd_A 6-phosphogluconate dehy 90.0 0.32 1.1E-05 47.5 5.4 33 108-140 3-35 (482)
433 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.0 0.31 1.1E-05 47.5 5.2 33 108-140 2-34 (478)
434 2p4q_A 6-phosphogluconate dehy 89.9 0.34 1.1E-05 47.5 5.4 33 108-140 11-43 (497)
435 1yj8_A Glycerol-3-phosphate de 89.9 0.25 8.6E-06 46.4 4.4 34 108-141 22-62 (375)
436 2cvz_A Dehydrogenase, 3-hydrox 89.9 0.26 9E-06 44.2 4.3 31 109-140 3-33 (289)
437 3vh1_A Ubiquitin-like modifier 89.9 0.29 1E-05 48.7 4.9 33 108-140 328-361 (598)
438 2hk9_A Shikimate dehydrogenase 89.8 0.29 9.8E-06 44.0 4.5 32 108-139 130-161 (275)
439 3cky_A 2-hydroxymethyl glutara 89.8 0.28 9.4E-06 44.4 4.4 33 108-140 5-37 (301)
440 1ldn_A L-lactate dehydrogenase 89.8 0.33 1.1E-05 44.5 5.0 33 108-140 7-41 (316)
441 3c7a_A Octopine dehydrogenase; 89.8 0.2 6.8E-06 47.6 3.6 30 108-137 3-33 (404)
442 2izz_A Pyrroline-5-carboxylate 89.7 0.35 1.2E-05 44.4 5.2 33 108-140 23-59 (322)
443 3don_A Shikimate dehydrogenase 89.7 0.29 9.9E-06 44.1 4.4 33 108-140 118-151 (277)
444 3ojo_A CAP5O; rossmann fold, c 89.7 0.26 8.8E-06 47.4 4.3 33 108-140 12-44 (431)
445 3ew7_A LMO0794 protein; Q8Y8U8 89.6 0.33 1.1E-05 41.2 4.6 32 109-140 2-34 (221)
446 1p77_A Shikimate 5-dehydrogena 89.6 0.21 7.2E-06 44.8 3.4 32 108-139 120-151 (272)
447 3tri_A Pyrroline-5-carboxylate 89.6 0.44 1.5E-05 42.9 5.6 33 108-140 4-39 (280)
448 4gx0_A TRKA domain protein; me 89.5 0.31 1.1E-05 48.5 4.9 35 108-142 349-383 (565)
449 3ce6_A Adenosylhomocysteinase; 89.5 0.34 1.1E-05 47.4 5.0 33 108-140 275-307 (494)
450 3d4o_A Dipicolinate synthase s 89.5 0.3 1E-05 44.3 4.5 33 107-139 155-187 (293)
451 3jyo_A Quinate/shikimate dehyd 89.5 0.37 1.3E-05 43.6 5.0 32 108-139 128-160 (283)
452 2ahr_A Putative pyrroline carb 89.5 0.3 1E-05 43.2 4.3 33 108-140 4-36 (259)
453 1i36_A Conserved hypothetical 89.5 0.33 1.1E-05 43.0 4.6 30 109-138 2-31 (264)
454 1x0v_A GPD-C, GPDH-C, glycerol 89.5 0.22 7.4E-06 46.3 3.5 34 108-141 9-49 (354)
455 2o3j_A UDP-glucose 6-dehydroge 89.5 0.27 9.3E-06 48.0 4.4 33 108-140 10-44 (481)
456 2rir_A Dipicolinate synthase, 89.4 0.31 1E-05 44.4 4.5 33 107-139 157-189 (300)
457 3gpi_A NAD-dependent epimerase 89.4 0.4 1.4E-05 42.8 5.2 33 108-140 4-36 (286)
458 3u62_A Shikimate dehydrogenase 89.4 0.35 1.2E-05 42.9 4.7 31 109-139 110-141 (253)
459 3h2s_A Putative NADH-flavin re 89.4 0.34 1.2E-05 41.4 4.5 31 109-139 2-33 (224)
460 1np3_A Ketol-acid reductoisome 89.4 0.44 1.5E-05 44.2 5.6 33 108-140 17-49 (338)
461 3gvp_A Adenosylhomocysteinase 89.2 0.39 1.3E-05 45.9 5.0 32 108-139 221-252 (435)
462 4aj2_A L-lactate dehydrogenase 89.1 0.46 1.6E-05 44.0 5.4 33 107-139 19-53 (331)
463 2q3e_A UDP-glucose 6-dehydroge 89.1 0.29 9.8E-06 47.6 4.3 33 108-140 6-40 (467)
464 3gt0_A Pyrroline-5-carboxylate 89.1 0.46 1.6E-05 41.7 5.2 33 108-140 3-39 (247)
465 2d5c_A AROE, shikimate 5-dehyd 89.1 0.44 1.5E-05 42.4 5.1 31 109-139 118-148 (263)
466 1wdk_A Fatty oxidation complex 89.1 0.39 1.3E-05 49.3 5.4 33 108-140 315-347 (715)
467 2we8_A Xanthine dehydrogenase; 89.1 0.37 1.3E-05 45.6 4.8 36 108-143 205-240 (386)
468 3orq_A N5-carboxyaminoimidazol 89.0 0.55 1.9E-05 44.1 6.1 33 108-140 13-45 (377)
469 3tnl_A Shikimate dehydrogenase 88.8 0.37 1.3E-05 44.2 4.5 32 108-139 155-187 (315)
470 1yb4_A Tartronic semialdehyde 88.8 0.27 9.3E-06 44.3 3.6 32 108-140 4-35 (295)
471 1tt5_B Ubiquitin-activating en 88.7 0.37 1.3E-05 46.4 4.6 33 108-140 41-74 (434)
472 3e8x_A Putative NAD-dependent 88.7 0.41 1.4E-05 41.4 4.6 33 108-140 22-55 (236)
473 2iz1_A 6-phosphogluconate dehy 88.6 0.51 1.7E-05 45.9 5.6 33 108-140 6-38 (474)
474 3pwz_A Shikimate dehydrogenase 88.6 0.53 1.8E-05 42.3 5.3 33 107-139 120-153 (272)
475 1nvt_A Shikimate 5'-dehydrogen 88.5 0.33 1.1E-05 43.9 3.9 31 108-139 129-159 (287)
476 1gpj_A Glutamyl-tRNA reductase 88.4 0.39 1.3E-05 45.7 4.5 32 108-139 168-200 (404)
477 3ius_A Uncharacterized conserv 88.3 0.36 1.2E-05 43.0 4.0 33 108-140 6-38 (286)
478 3fi9_A Malate dehydrogenase; s 88.2 0.58 2E-05 43.5 5.4 32 108-139 9-43 (343)
479 1vg0_A RAB proteins geranylger 88.2 1 3.5E-05 45.5 7.6 54 191-244 378-434 (650)
480 1leh_A Leucine dehydrogenase; 88.2 0.5 1.7E-05 44.3 5.0 32 108-139 174-205 (364)
481 1b8p_A Protein (malate dehydro 88.1 0.39 1.3E-05 44.3 4.2 33 107-139 5-45 (329)
482 2d4a_B Malate dehydrogenase; a 88.1 0.49 1.7E-05 43.3 4.8 32 109-140 1-33 (308)
483 2zqz_A L-LDH, L-lactate dehydr 88.0 0.54 1.8E-05 43.4 5.1 33 107-139 9-43 (326)
484 1ez4_A Lactate dehydrogenase; 88.0 0.47 1.6E-05 43.6 4.7 32 108-139 6-39 (318)
485 1lu9_A Methylene tetrahydromet 87.6 0.48 1.7E-05 42.7 4.5 32 108-139 120-152 (287)
486 1kjq_A GART 2, phosphoribosylg 87.6 0.56 1.9E-05 44.1 5.1 35 106-140 10-44 (391)
487 3q2o_A Phosphoribosylaminoimid 87.6 0.68 2.3E-05 43.6 5.7 33 108-140 15-47 (389)
488 1npy_A Hypothetical shikimate 87.4 0.54 1.8E-05 42.2 4.6 32 108-139 120-152 (271)
489 3t4e_A Quinate/shikimate dehyd 87.4 0.55 1.9E-05 43.0 4.7 32 108-139 149-181 (312)
490 3fbt_A Chorismate mutase and s 87.4 0.46 1.6E-05 42.9 4.1 33 107-139 122-155 (282)
491 3o8q_A Shikimate 5-dehydrogena 87.4 0.52 1.8E-05 42.5 4.5 33 107-139 126-159 (281)
492 2x0j_A Malate dehydrogenase; o 87.3 0.5 1.7E-05 42.9 4.3 31 109-139 2-34 (294)
493 4e4t_A Phosphoribosylaminoimid 87.2 0.85 2.9E-05 43.5 6.1 33 108-140 36-68 (419)
494 1hdo_A Biliverdin IX beta redu 87.1 0.6 2.1E-05 39.0 4.5 33 108-140 4-37 (206)
495 4b4o_A Epimerase family protei 86.8 0.6 2E-05 41.9 4.6 32 109-140 2-34 (298)
496 2dbq_A Glyoxylate reductase; D 86.8 0.91 3.1E-05 41.9 5.9 34 107-140 150-183 (334)
497 3zwc_A Peroxisomal bifunctiona 86.8 0.67 2.3E-05 47.7 5.4 34 107-140 316-349 (742)
498 3two_A Mannitol dehydrogenase; 86.7 0.7 2.4E-05 42.8 5.1 33 108-140 178-210 (348)
499 3vps_A TUNA, NAD-dependent epi 86.6 0.82 2.8E-05 41.2 5.5 34 108-141 8-42 (321)
500 3h9u_A Adenosylhomocysteinase; 86.6 0.69 2.4E-05 44.3 5.0 33 107-139 211-243 (436)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.97 E-value=4.5e-29 Score=240.36 Aligned_cols=254 Identities=15% Similarity=0.155 Sum_probs=182.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC----CCCcCcHHHHHhcCCchhh---hhhcccceEEeCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT----NNYGVWEDEFRDLGLEGCI---EHVWRDTVVYIDEDEP 178 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~----~~~g~~~~~l~~~g~~~~~---~~~~~~~~~~~~~~~~ 178 (375)
++|||+||||||+|+++|+.|+++|++|+|||+.+..+ +..+++...++.+++.... ...+....++.+....
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 35999999999999999999999999999999876543 2334567778888765432 2222222333332221
Q ss_pred -ee-----ecCCce-eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-CC--eEEecCEEEEccCCCC
Q 017240 179 -IL-----IGRAYG-RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATVASGAAS 247 (375)
Q Consensus 179 -~~-----~~~~~~-~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~g--~~i~a~~vI~A~G~~s 247 (375)
.. .....+ .+++..+.+.|.+.+.+.|++++ ++.|+++..+++....+... ++ .+++||+||+|||.+|
T Consensus 83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 11 112223 68999999999999999999999 99999998877744444332 33 4799999999999998
Q ss_pred cccccc--------------------------------------------------------------------------
Q 017240 248 GKLLEY-------------------------------------------------------------------------- 253 (375)
Q Consensus 248 ~~~~~~-------------------------------------------------------------------------- 253 (375)
.+....
T Consensus 163 ~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l 242 (397)
T 3oz2_A 163 EFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIHNRFELKNYL 242 (397)
T ss_dssp HHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSCSHHHHHHHH
T ss_pred HHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhhhhhhHHHHH
Confidence 653110
Q ss_pred -----------c------CceeeecCC-CCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCC-c
Q 017240 254 -----------E------EWSYIPVGG-SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS-R 314 (375)
Q Consensus 254 -----------~------~~~~~p~~~-~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~-~ 314 (375)
. ....+|... ..+...++++++|||||.++|.+|+|++.|+.+|..+|++|.++++.++. .
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~ 322 (397)
T 3oz2_A 243 DRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSP 322 (397)
T ss_dssp HHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSH
T ss_pred HHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccH
Confidence 0 000111111 12345679999999999999999999999999999999999999987652 2
Q ss_pred cccccccchhHHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhhc
Q 017240 315 GRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFR 370 (375)
Q Consensus 315 ~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~~ 370 (375)
. ..+.|++.|+..|..+......+++ .+..++++.++++++.+..
T Consensus 323 ~-------~L~~Ye~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 367 (397)
T 3oz2_A 323 Q-------MMQKYEKLIKERFERKHLRNWVAKE----KLAMLSDDTLDKLVDIVSE 367 (397)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHTCCHHHHHHHHHHHTT
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCCHHHHHHHHHHHhH
Confidence 3 3458999998888777666666555 7788899888888876543
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.94 E-value=6.2e-26 Score=219.18 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=182.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC----CCCcCcHHHHHhcCCchhh---hhhcccceEEeCCCCC-
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT----NNYGVWEDEFRDLGLEGCI---EHVWRDTVVYIDEDEP- 178 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~----~~~g~~~~~l~~~g~~~~~---~~~~~~~~~~~~~~~~- 178 (375)
.+||+|||||++|+++|+.|++.|++|+|||+....+ ...+++.+.++.+|+.... ...+....++......
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 5899999999999999999999999999999987443 2334456778888874331 1122222222222221
Q ss_pred eeec-----CC-ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe---cCCeEEecCEEEEccCCCCc
Q 017240 179 ILIG-----RA-YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 179 ~~~~-----~~-~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~---~~g~~i~a~~vI~A~G~~s~ 248 (375)
.... .+ ...+++..+.+.|.+.+.+.|++++ +++|+++..+++....|++ .++.++.||+||+|+|.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 2221 22 3378999999999999999999999 9999999887663333666 34568999999999999873
Q ss_pred cc------c-c-----c----------------------c---C---ceeee----------------------------
Q 017240 249 KL------L-E-----Y----------------------E---E---WSYIP---------------------------- 260 (375)
Q Consensus 249 ~~------~-~-----~----------------------~---~---~~~~p---------------------------- 260 (375)
.. . . + . . .+.+|
T Consensus 164 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~l~ 243 (397)
T 3cgv_A 164 FGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIHNRFELKNYLD 243 (397)
T ss_dssp HHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTCSCHHHHHHHHH
T ss_pred hHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccccCCCCHHHHHH
Confidence 22 1 0 0 0 0 00111
Q ss_pred -----------------------cCCC-CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCC-Ccc
Q 017240 261 -----------------------VGGS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH-SRG 315 (375)
Q Consensus 261 -----------------------~~~~-~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~-~~~ 315 (375)
.... ..+..++++++||++|.++|.+|+|++.++.++..+++.|.+.+..++ ...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~ 323 (397)
T 3cgv_A 244 RFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQ 323 (397)
T ss_dssp HHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHH
T ss_pred HHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHH
Confidence 1111 123467899999999999999999999999999999999999886553 222
Q ss_pred ccccccchhHHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhhcC
Q 017240 316 RLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRL 371 (375)
Q Consensus 316 ~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~~l 371 (375)
....|++.|...+..+....+.+.. ++..++++.+++|++.+...
T Consensus 324 -------~l~~Y~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 368 (397)
T 3cgv_A 324 -------MMQKYEKLIKERFERKHLRNWVAKE----KLAMLSDDTLDKLVDIVSEQ 368 (397)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHH----HHTTCCHHHHHHHHHHHTTS
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCCHHHHHHHHHhcCcc
Confidence 3457888888777777777777666 78899999999999877543
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.92 E-value=1.3e-23 Score=207.28 Aligned_cols=249 Identities=14% Similarity=0.120 Sum_probs=171.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC--C---CCCcCcHHHHHhcCCchhhhh----hcccceEEeCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF--T---NNYGVWEDEFRDLGLEGCIEH----VWRDTVVYIDEDE 177 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~--~---~~~g~~~~~l~~~g~~~~~~~----~~~~~~~~~~~~~ 177 (375)
.+||+||||||+|+++|+.|++.|++|+|||+.... + +..++..+.++.+++...... .+.....+.+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 489999999999999999999999999999987542 1 222335577788776442211 1111122222111
Q ss_pred C-eeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEccCCCCccc
Q 017240 178 P-ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGKL 250 (375)
Q Consensus 178 ~-~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~~ 250 (375)
. .........+++..+.+.|.+.+.+.|++++ +++|+++..+++....|++. +|+ ++.||+||+|||.+|..+
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 1 1111112368999999999999999999999 99999998876643335543 665 799999999999887532
Q ss_pred c---------------cc----------c------C---------------ceeeec-----------------------
Q 017240 251 L---------------EY----------E------E---------------WSYIPV----------------------- 261 (375)
Q Consensus 251 ~---------------~~----------~------~---------------~~~~p~----------------------- 261 (375)
. .+ . + .+++|.
T Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~ 245 (453)
T 3atr_A 166 SKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEY 245 (453)
T ss_dssp GGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCCCCHHHH
T ss_pred HhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCCCCHHHH
Confidence 1 00 0 0 011220
Q ss_pred ---------------------------CCCC-CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCC
Q 017240 262 ---------------------------GGSL-PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS 313 (375)
Q Consensus 262 ---------------------------~~~~-~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~ 313 (375)
.... .+..++++++|||||.++|.+|+|++.|+.+|..+|+.|.+.++.++.
T Consensus 246 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~ 325 (453)
T 3atr_A 246 YKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDF 325 (453)
T ss_dssp HHHHHHHHCTTEEEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhhhhcCCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 0000 122568999999999999999999999999999999999998875542
Q ss_pred -ccccccccchhHHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHH
Q 017240 314 -RGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFR 366 (375)
Q Consensus 314 -~~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~ 366 (375)
... ...|++.|...+.........++. ++..+.++.+++++.
T Consensus 326 ~~~~-------L~~Y~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 368 (453)
T 3atr_A 326 SASG-------LWDMNICYVNEYGAKQASLDIFRR----FLQKLSNDDINYGMK 368 (453)
T ss_dssp STTT-------TTHHHHHHHHHTHHHHHHHHHHHH----HHTTCCHHHHHHHHH
T ss_pred cHHH-------HHHHHHHHHHHHHHHHHHHHHHHH----HHHHcCcHhHHHHHH
Confidence 333 358888888888777666666666 555666665555553
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.91 E-value=4.5e-23 Score=200.39 Aligned_cols=199 Identities=19% Similarity=0.161 Sum_probs=142.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhc---ccceEEeCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVW---RDTVVYIDE 175 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~---~~~~~~~~~ 175 (375)
.+.+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+.... .....+...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 346999999999999999999999999999999986442 2233333 4567777755443221 111122221
Q ss_pred -CCC-eee---------cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEcc
Q 017240 176 -DEP-ILI---------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVAS 243 (375)
Q Consensus 176 -~~~-~~~---------~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~ 243 (375)
... ..+ ......+++..|.+.|.+.+.+ ++++ +++|+++..+++ .+.|++.+|+++.||+||+||
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 101 SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECC
T ss_pred CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cEEEEEcCCCEEeeCEEEECC
Confidence 111 111 1233478999999999999977 8888 999999998877 688999999899999999999
Q ss_pred CCCCcccccc----------------------------------------------------------------------
Q 017240 244 GAASGKLLEY---------------------------------------------------------------------- 253 (375)
Q Consensus 244 G~~s~~~~~~---------------------------------------------------------------------- 253 (375)
|.+|.++..+
T Consensus 178 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (407)
T 3rp8_A 178 GSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTL 257 (407)
T ss_dssp CTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTH
T ss_pred CcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhH
Confidence 9998764110
Q ss_pred --------cC-------------------ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 254 --------EE-------------------WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 254 --------~~-------------------~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
.. +..+|......+..++++++|||+|.++|.+|+|++.|+.+|..+++.|..
T Consensus 258 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~ 337 (407)
T 3rp8_A 258 RADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQ 337 (407)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhc
Confidence 00 001111111123457899999999999999999999999999999999973
No 5
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.91 E-value=1.9e-22 Score=196.61 Aligned_cols=206 Identities=16% Similarity=0.143 Sum_probs=142.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCc--C---cHHHHHhcCCchhhhhhc-----------ccc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG--V---WEDEFRDLGLEGCIEHVW-----------RDT 169 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g--~---~~~~l~~~g~~~~~~~~~-----------~~~ 169 (375)
..+||+|||||++|+++|+.|++.|++|+|||+........| + ....++.+++.+.+.... ...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 358999999999999999999999999999999853221211 2 224566666644332211 111
Q ss_pred eEEeCCCCCeeecCC-ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEecCCe--EEecCEEEEccC
Q 017240 170 VVYIDEDEPILIGRA-YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDM--IVPCRLATVASG 244 (375)
Q Consensus 170 ~~~~~~~~~~~~~~~-~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~~g~--~i~a~~vI~A~G 244 (375)
...++-......... ...+++..+.+.|.+.+++.|++++ +++|+++..++++ .+.|.+.+|. ++.||+||+|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G 163 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASG 163 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCG
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCC
Confidence 111110000000112 2378999999999999999999999 9999999887663 3456667886 799999999999
Q ss_pred CCCcccccc-------------------c--------------------C---ceeeecC--------------------
Q 017240 245 AASGKLLEY-------------------E--------------------E---WSYIPVG-------------------- 262 (375)
Q Consensus 245 ~~s~~~~~~-------------------~--------------------~---~~~~p~~-------------------- 262 (375)
.+|..+..+ . . .+.+|..
T Consensus 164 ~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~ 243 (421)
T 3nix_A 164 YGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTG 243 (421)
T ss_dssp GGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTTSCS
T ss_pred CchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhcCC
Confidence 887432100 0 0 0011100
Q ss_pred --------------------------CC-----------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 263 --------------------------GS-----------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 263 --------------------------~~-----------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+ .+...++++++||+++.++|.+|+|++.|+.+|..+++.|.
T Consensus 244 ~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~ 323 (421)
T 3nix_A 244 TPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAV 323 (421)
T ss_dssp CHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHH
Confidence 00 01335799999999999999999999999999999999999
Q ss_pred HHHhcC
Q 017240 306 YILKHD 311 (375)
Q Consensus 306 ~~l~~~ 311 (375)
+.+.++
T Consensus 324 ~~~~~~ 329 (421)
T 3nix_A 324 QFLKGE 329 (421)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 998765
No 6
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.90 E-value=4.8e-23 Score=208.45 Aligned_cols=264 Identities=18% Similarity=0.091 Sum_probs=166.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhcccceEE-eCCCC-
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWRDTVVY-IDEDE- 177 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~~~~~~-~~~~~- 177 (375)
..+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+.......... +....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 35899999999999999999999999999999875432 3333433 4566667654432211100000 11100
Q ss_pred -C-----eeecCCce-eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe--cCC-eEEecCEEEEccCCC
Q 017240 178 -P-----ILIGRAYG-RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EHD-MIVPCRLATVASGAA 246 (375)
Q Consensus 178 -~-----~~~~~~~~-~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~--~~g-~~i~a~~vI~A~G~~ 246 (375)
. .....+++ .+++..+.+.|.+.+.+.|++|+ +++|++++.+++ .+.|++ .+| .+++||+||+|||.+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~-~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE-AVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS-CEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-eEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0 00112233 68999999999999999999999 999999988776 566766 677 789999999999999
Q ss_pred Ccccccc----------------------c-----------Ccee--eecC-----------------------------
Q 017240 247 SGKLLEY----------------------E-----------EWSY--IPVG----------------------------- 262 (375)
Q Consensus 247 s~~~~~~----------------------~-----------~~~~--~p~~----------------------------- 262 (375)
|.++..+ . +..+ +|..
T Consensus 207 S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 286 (570)
T 3fmw_A 207 STVRRLAADRFPGTEATVRALIGYVTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLG 286 (570)
T ss_dssp CHHHHHTTCCCCCCCCCEEEEEEECCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHH
T ss_pred chHHHHcCCCCccceeeeEEEEEEEEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHH
Confidence 8653110 0 0000 1200
Q ss_pred --------------CC--------------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCCc
Q 017240 263 --------------GS--------------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSR 314 (375)
Q Consensus 263 --------------~~--------------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~~ 314 (375)
.. ..+..++++++|||||.++|..|||++.+++++..+++.|...+++....
T Consensus 287 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~ 366 (570)
T 3fmw_A 287 AAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSE 366 (570)
T ss_dssp HHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHhhcccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcH
Confidence 00 01335689999999999999999999999999999999999998765444
Q ss_pred cccccccchh--------HHHHHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhhcCCC
Q 017240 315 GRLTHEQSNE--------NISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPK 373 (375)
Q Consensus 315 ~~L~~~~~~~--------~~~~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~~l~~ 373 (375)
..|.. |+.. .........++.........+|+.++.++ .+ +.--+.++....++..
T Consensus 367 ~lL~~-Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l~-~~-~~~~~~~~~~~~g~~~ 430 (570)
T 3fmw_A 367 ELLDT-YHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELL-GT-DEVNRYFTGMITGTDV 430 (570)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHHT-TS-HHHHHHHHHHHHSTTC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh-cC-HHHHHHHHHHHhCCCc
Confidence 44431 1110 11112222333332222556677666655 32 3323345555555543
No 7
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.90 E-value=2.5e-22 Score=201.10 Aligned_cols=236 Identities=20% Similarity=0.160 Sum_probs=155.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC--CcCcH----HHHHhcCCchhhhhhcc---cce-EEeCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YGVWE----DEFRDLGLEGCIEHVWR---DTV-VYIDE 175 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~--~g~~~----~~l~~~g~~~~~~~~~~---~~~-~~~~~ 175 (375)
..+||+|||||++|+++|+.|++.|++|+|||+....... .+++. ..++.+|+.+.+..... ... .....
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 4589999999999999999999999999999998632212 22222 24566776544322110 111 11111
Q ss_pred C-CCe--------eecCCc-eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCce--EEEEecCC--eEEecCEEE
Q 017240 176 D-EPI--------LIGRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGH--RLVACEHD--MIVPCRLAT 240 (375)
Q Consensus 176 ~-~~~--------~~~~~~-~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~--~~V~~~~g--~~i~a~~vI 240 (375)
. ... .....+ ..+++..+.+.|.+.+++.|++++ +++|+++..+++.. +.+...+| .++.||+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 0 000 011122 368999999999999999999999 99999999877643 33444567 489999999
Q ss_pred EccCCCCcccccc--------------------------------------cC-ceeeecCC------------------
Q 017240 241 VASGAASGKLLEY--------------------------------------EE-WSYIPVGG------------------ 263 (375)
Q Consensus 241 ~A~G~~s~~~~~~--------------------------------------~~-~~~~p~~~------------------ 263 (375)
+|||.+|..+..+ .+ .+.+|...
T Consensus 166 ~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~ 245 (512)
T 3e1t_A 166 DASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAIK 245 (512)
T ss_dssp ECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTTS
T ss_pred ECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhhc
Confidence 9999988654211 00 00111000
Q ss_pred --------------------------------------------CCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHH
Q 017240 264 --------------------------------------------SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPN 299 (375)
Q Consensus 264 --------------------------------------------~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~ 299 (375)
...+..+++++|||++|.++|.+|+|++.++.++..
T Consensus 246 ~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~ 325 (512)
T 3e1t_A 246 DGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALL 325 (512)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHH
Confidence 001235789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccccccccchhHHHHHHHHhhCchhhHHHHHHHH
Q 017240 300 YASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFL 347 (375)
Q Consensus 300 ~a~~i~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 347 (375)
+++.|...+.++.+.. .....|++.|...|..-+.....++.
T Consensus 326 La~~L~~~l~~~~~~~------~aL~~Ye~~~~~~~~~~~~~~~~~y~ 367 (512)
T 3e1t_A 326 VARAINTCLAGEMSEQ------RCFEEFERRYRREYGNFYQFLVAFYD 367 (512)
T ss_dssp HHHHHHHHTTTCSCHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCccHH------HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999886543211 02346777766665544444444333
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.90 E-value=8.5e-23 Score=197.69 Aligned_cols=202 Identities=18% Similarity=0.211 Sum_probs=139.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcC--cH---HHHHhcCCchhhhhhcc------cceEEe
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGV--WE---DEFRDLGLEGCIEHVWR------DTVVYI 173 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~--~~---~~l~~~g~~~~~~~~~~------~~~~~~ 173 (375)
.+|+||||||+||++|+.|++.|++|+||||.+.... .+++ +. +.|+.+++.+....... ....+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5799999999999999999999999999998764432 2333 22 45677776544321110 011111
Q ss_pred CCCCC-------------eeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEE
Q 017240 174 DEDEP-------------ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLA 239 (375)
Q Consensus 174 ~~~~~-------------~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~v 239 (375)
+.... .........+++..|.+.|.+.+ +.+|+ +++|++++..+++.++|++.||++++||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVL 158 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEE
Confidence 11100 01112223578888888887644 45678 999999988766578999999999999999
Q ss_pred EEccCCCCcccccc--------------------------------------------cCce------------------
Q 017240 240 TVASGAASGKLLEY--------------------------------------------EEWS------------------ 257 (375)
Q Consensus 240 I~A~G~~s~~~~~~--------------------------------------------~~~~------------------ 257 (375)
|+|||.+|.++..+ ....
T Consensus 159 VgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (412)
T 4hb9_A 159 VGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLA 238 (412)
T ss_dssp EECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGC
T ss_pred EECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEecc
Confidence 99999999764210 0000
Q ss_pred ---------e------ee---------------------------------------------cCCCCCccCCCEEEEcc
Q 017240 258 ---------Y------IP---------------------------------------------VGGSLPNTEQRNLAFGA 277 (375)
Q Consensus 258 ---------~------~p---------------------------------------------~~~~~~~~~~~v~liGd 277 (375)
+ .| .....++..++|+++||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGD 318 (412)
T 4hb9_A 239 EIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVTLLGD 318 (412)
T ss_dssp CEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEEECTH
T ss_pred CCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEEEEEc
Confidence 0 00 00001234679999999
Q ss_pred CCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 278 AASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 278 aa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
|||.++|..|||++.|+.||..+++.|...+.+..
T Consensus 319 AAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~ 353 (412)
T 4hb9_A 319 AIHNMTPMTGSGANTALRDALLLTQKLASVASGHE 353 (412)
T ss_dssp HHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred ccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999887654
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.90 E-value=2.5e-22 Score=202.14 Aligned_cols=213 Identities=18% Similarity=0.177 Sum_probs=148.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhcc---cc--eE--
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWR---DT--VV-- 171 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~---~~--~~-- 171 (375)
+.++||+||||||+|+++|+.|++.|++|+|||+..... ...++.. +.++.+|+.+.+..... .. ..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 345899999999999999999999999999999986432 2333333 45666776544322110 00 00
Q ss_pred EeCCC--CCe---------------e-ecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc---eEEEEec
Q 017240 172 YIDED--EPI---------------L-IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG---HRLVACE 229 (375)
Q Consensus 172 ~~~~~--~~~---------------~-~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~---~~~V~~~ 229 (375)
+.... ... . ...+...+++..+...|.+.+.+.|++++ +++|+++..++++ .++|++.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~ 162 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLA 162 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEE
Confidence 11100 000 0 11123478999999999999999999999 9999999887652 4667766
Q ss_pred CC---eEEecCEEEEccCCCCcccccc----------------------c----C-----c---------eeeecC----
Q 017240 230 HD---MIVPCRLATVASGAASGKLLEY----------------------E----E-----W---------SYIPVG---- 262 (375)
Q Consensus 230 ~g---~~i~a~~vI~A~G~~s~~~~~~----------------------~----~-----~---------~~~p~~---- 262 (375)
++ .+++||+||+|||.+|.++..+ . + . .++|..
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~ 242 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDR 242 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTE
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCE
Confidence 65 6899999999999998654111 0 0 0 000100
Q ss_pred --------------------------------CC-------------------CCccCCCEEEEccCCCCCCCCChHHHH
Q 017240 263 --------------------------------GS-------------------LPNTEQRNLAFGAAASMVHPATGYSVV 291 (375)
Q Consensus 263 --------------------------------~~-------------------~~~~~~~v~liGdaa~~~~p~~G~Gi~ 291 (375)
.. ..+..++++++|||+|.++|..|+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n 322 (535)
T 3ihg_A 243 HTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGN 322 (535)
T ss_dssp EEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHH
T ss_pred EEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEEEECccccCCEEEEecccccCCCccCCccc
Confidence 00 013457999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHhcCCCcccc
Q 017240 292 RSLSEAPNYASAIAYILKHDHSRGRL 317 (375)
Q Consensus 292 ~al~~a~~~a~~i~~~l~~~~~~~~L 317 (375)
.++.+|..+++.|...+++......|
T Consensus 323 ~ai~DA~~La~~La~~l~g~~~~~lL 348 (535)
T 3ihg_A 323 AAVADGFDLAWKLAAVLQGQAGAGLL 348 (535)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCTTHH
T ss_pred cccccHHHHHHHHHHHhcCCCcHHHH
Confidence 99999999999999998765444443
No 10
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.90 E-value=1.6e-22 Score=201.77 Aligned_cols=210 Identities=21% Similarity=0.209 Sum_probs=148.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhcccceEEeCCCCCe
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
..+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+..........+... ..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~-~~ 89 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR-PV 89 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE-EE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce-ec
Confidence 45899999999999999999999999999999875432 2334443 45677887654432200001111100 00
Q ss_pred e-----ecCCc-eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCe---EEecCEEEEccCCCCcc
Q 017240 180 L-----IGRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM---IVPCRLATVASGAASGK 249 (375)
Q Consensus 180 ~-----~~~~~-~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~---~i~a~~vI~A~G~~s~~ 249 (375)
. ...++ ..+++..+.+.|.+.+.+.|++++ +++|++++.+++ .++|++.++. +++||+||+|||++|.+
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD-HVVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-CEEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 0 11223 368899999999999999999999 999999998877 5678777663 79999999999999965
Q ss_pred cccc--------------------c---C-c----------eeeec----------------------------------
Q 017240 250 LLEY--------------------E---E-W----------SYIPV---------------------------------- 261 (375)
Q Consensus 250 ~~~~--------------------~---~-~----------~~~p~---------------------------------- 261 (375)
+..+ . . . .++|.
T Consensus 169 R~~lg~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (499)
T 2qa2_A 169 RKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQR 248 (499)
T ss_dssp HHHTTCCCCEECCCCCEEEEEEESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCccEEEEEEEEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHH
Confidence 4110 0 0 0 00010
Q ss_pred --CCC-------------------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCCcccc
Q 017240 262 --GGS-------------------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRL 317 (375)
Q Consensus 262 --~~~-------------------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~~~~L 317 (375)
+.. ..+..++|+++|||||.++|..|||+|.+|++|..+++.|+..+++......|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L 325 (499)
T 2qa2_A 249 LTGQDISHGEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLL 325 (499)
T ss_dssp HHSCCCTTCEEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHH
T ss_pred HhCCCCCccceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHH
Confidence 000 01234689999999999999999999999999999999999998754433444
No 11
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.89 E-value=2.1e-22 Score=200.88 Aligned_cols=211 Identities=19% Similarity=0.180 Sum_probs=148.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhcccceEEeCCCCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWRDTVVYIDEDEP 178 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 178 (375)
...+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+..........+... .
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~-~ 87 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL-P 87 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE-E
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce-e
Confidence 346899999999999999999999999999999876432 2334443 45667787654432211111111100 0
Q ss_pred ee-----ecCCc-eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCe---EEecCEEEEccCCCCc
Q 017240 179 IL-----IGRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM---IVPCRLATVASGAASG 248 (375)
Q Consensus 179 ~~-----~~~~~-~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~---~i~a~~vI~A~G~~s~ 248 (375)
.. ...++ ..+++..+.+.|.+.+.+.|++++ +++|+++..+++ .++|++.++. ++++|+||+|||++|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 00 11223 368899999999999999999999 999999998877 5777776653 7999999999999996
Q ss_pred ccccc--------------------c---C-c----------eeeec---------------------------------
Q 017240 249 KLLEY--------------------E---E-W----------SYIPV--------------------------------- 261 (375)
Q Consensus 249 ~~~~~--------------------~---~-~----------~~~p~--------------------------------- 261 (375)
++..+ . . . .++|.
T Consensus 167 VR~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (500)
T 2qa1_A 167 VRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWK 246 (500)
T ss_dssp HHHHTTCCCCEECCCCEEEEEEEESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHH
T ss_pred HHHHcCCCcCCCccceEEEEEEEEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHH
Confidence 54111 0 0 0 00010
Q ss_pred ---CCC-------------------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCCcccc
Q 017240 262 ---GGS-------------------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRL 317 (375)
Q Consensus 262 ---~~~-------------------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~~~~L 317 (375)
+.. ..+..++|+++|||+|.++|..|||+|.+++++..+++.|+..+++......|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L 324 (500)
T 2qa1_A 247 RLTGDDIAHAEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELL 324 (500)
T ss_dssp HHHSCCCTTSEEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHH
T ss_pred HhcCCCCCccceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHH
Confidence 000 01234689999999999999999999999999999999999988754433433
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.89 E-value=1.3e-21 Score=189.10 Aligned_cols=263 Identities=14% Similarity=0.170 Sum_probs=167.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC-----CCCCcCcH---HHHHhcCCchhhhhh---cccceEEeCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF-----TNNYGVWE---DEFRDLGLEGCIEHV---WRDTVVYIDE 175 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~-----~~~~g~~~---~~l~~~g~~~~~~~~---~~~~~~~~~~ 175 (375)
++||+||||||+|+++|+.|++.|++|+|||+.... .....++. +.++.+|+.+.+... ......+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~- 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA- 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET-
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC-
Confidence 379999999999999999999999999999987631 11222333 456677775544321 111111111
Q ss_pred CCCeee-------cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccC
Q 017240 176 DEPILI-------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASG 244 (375)
Q Consensus 176 ~~~~~~-------~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G 244 (375)
...... +.....+++..+.+.|.+.+.+.|++++ +++|+++..++++.+.|++ .+|. ++++|+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 110000 1122256788899999999988999999 9999999876433466776 6786 799999999999
Q ss_pred CCCcccccc------------------------------------cCceeeec---------------------------
Q 017240 245 AASGKLLEY------------------------------------EEWSYIPV--------------------------- 261 (375)
Q Consensus 245 ~~s~~~~~~------------------------------------~~~~~~p~--------------------------- 261 (375)
.+|.++..+ ..+..+|.
T Consensus 161 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T 1k0i_A 161 FHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSDERFW 240 (394)
T ss_dssp TTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHH
T ss_pred CCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCHHHHH
Confidence 998654110 00000000
Q ss_pred -------CC---------C--------------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 262 -------GG---------S--------------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 262 -------~~---------~--------------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
.. . .++..++++++|||||.++|.+|+|++.++.+|..+++.|...++.+
T Consensus 241 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~ 320 (394)
T 1k0i_A 241 TELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG 320 (394)
T ss_dssp HHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhCcccccccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC
Confidence 00 0 01235789999999999999999999999999999999999887654
Q ss_pred CCccccccccchhH--------HH---HHHHHhhCchhhHHHHHHHHHhHHHHhcCCHHHHHHHHHHhhcCCC
Q 017240 312 HSRGRLTHEQSNEN--------IS---MQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPK 373 (375)
Q Consensus 312 ~~~~~L~~~~~~~~--------~~---~~~w~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~f~~~~~l~~ 373 (375)
. ...|.. |+... .. ...+...|+........+++.++..+...+. --+.+.+.+.++|.
T Consensus 321 ~-~~~L~~-Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~-~~~~~~~~~~g~p~ 390 (394)
T 1k0i_A 321 R-GELLER-YSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEA-GLATIAENYVGLPY 390 (394)
T ss_dssp C-GGGGGG-HHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHH-HHHHHHHHHSCCCC
T ss_pred c-hHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHH-HHHHHHHHhcCCCC
Confidence 2 333431 11100 00 0111222343345556677777777766543 34456666677774
No 13
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.89 E-value=2.9e-22 Score=203.29 Aligned_cols=234 Identities=18% Similarity=0.200 Sum_probs=156.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC--CcCcH---HHHHhcCCchhhhhhc---ccce-EEeCCC-
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YGVWE---DEFRDLGLEGCIEHVW---RDTV-VYIDED- 176 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~--~g~~~---~~l~~~g~~~~~~~~~---~~~~-~~~~~~- 176 (375)
.+||+|||||++|+++|+.|++.|++|+|||+....... .+++. ..++.+|+...+.... .... ......
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 589999999999999999999999999999988543322 22322 4566677654332211 0011 111110
Q ss_pred CC----------eeecCCc-eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-CC--eEEecCEEEE
Q 017240 177 EP----------ILIGRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATV 241 (375)
Q Consensus 177 ~~----------~~~~~~~-~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~g--~~i~a~~vI~ 241 (375)
.. .....++ ..+++..+.+.|.+.+++.|++++ +++|+++..+++..+.|++. +| .++.||+||+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEE
Confidence 00 0011222 378999999999999999999999 99999998764446788776 66 5899999999
Q ss_pred ccCCCCcccccc--------------------------------------cC-ceeeecCC-------------------
Q 017240 242 ASGAASGKLLEY--------------------------------------EE-WSYIPVGG------------------- 263 (375)
Q Consensus 242 A~G~~s~~~~~~--------------------------------------~~-~~~~p~~~------------------- 263 (375)
|||.+|..+..+ .+ .+.+|...
T Consensus 183 AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~ 262 (591)
T 3i3l_A 183 AGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEVRE 262 (591)
T ss_dssp CCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHHHH
T ss_pred CCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhhcc
Confidence 999988543110 00 01122100
Q ss_pred ---------------------------------------CCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHH
Q 017240 264 ---------------------------------------SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAI 304 (375)
Q Consensus 264 ---------------------------------------~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i 304 (375)
...+..++++++|||+|.++|..|+|++.++.+|..+++.|
T Consensus 263 ~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L 342 (591)
T 3i3l_A 263 QGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAI 342 (591)
T ss_dssp HCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHH
Confidence 01233678999999999999999999999999999999999
Q ss_pred HHHHhcCCCccccccccchhHHHHHHHHhhCchhhHHHHHHH
Q 017240 305 AYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQRAFF 346 (375)
Q Consensus 305 ~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 346 (375)
...+..+.... .....|.+.|...|..-......++
T Consensus 343 ~~~l~~~~~~~------~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 343 DRITRHGDEKD------AVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHCGGGHH------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887542111 1234666666666654444444333
No 14
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.86 E-value=9.7e-21 Score=183.36 Aligned_cols=205 Identities=20% Similarity=0.202 Sum_probs=143.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC---CCCCcCcH---HHHHhcCCchhhhhhc---ccceEEeCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF---TNNYGVWE---DEFRDLGLEGCIEHVW---RDTVVYIDED 176 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~---~~~~g~~~---~~l~~~g~~~~~~~~~---~~~~~~~~~~ 176 (375)
..+||+||||||+|+++|+.|++.|++|+|||+.... +....++. +.++.+|+.+.+.... .....+....
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 3589999999999999999999999999999987543 22233333 4566667654332111 1111111111
Q ss_pred C-Ceee------cCCce-eecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcCCceE--EEEecCCeEEecCEEEEccC
Q 017240 177 E-PILI------GRAYG-RVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHR--LVACEHDMIVPCRLATVASG 244 (375)
Q Consensus 177 ~-~~~~------~~~~~-~v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~--~V~~~~g~~i~a~~vI~A~G 244 (375)
. ...+ ...++ .+++..+.+.|.+.+++. |++++ +++|+++..+++ .+ .|++.+|+++.+|+||+|||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCC
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCC
Confidence 0 0000 11223 689999999999999987 99999 999999998776 45 78888888899999999999
Q ss_pred CCCccc---------c-----c--c------------------c-Cc--eeee---------------------------
Q 017240 245 AASGKL---------L-----E--Y------------------E-EW--SYIP--------------------------- 260 (375)
Q Consensus 245 ~~s~~~---------~-----~--~------------------~-~~--~~~p--------------------------- 260 (375)
.+|..+ . . . . .. .++|
T Consensus 164 ~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (399)
T 2x3n_A 164 IASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERNRLYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGE 243 (399)
T ss_dssp TTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCEEEEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSH
T ss_pred CChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCccEEEcCCCcEEEEEEcCCCEEEEEEEeCccccccccccCCHH
Confidence 887432 0 0 0 0 00 0000
Q ss_pred ------------c--C-----C--C------------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHH
Q 017240 261 ------------V--G-----G--S------------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYI 307 (375)
Q Consensus 261 ------------~--~-----~--~------------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~ 307 (375)
+ . . . ..+..++++++|||+|.++|.+|+|++.++.+|..+++.|.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~ 323 (399)
T 2x3n_A 244 SLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLA 323 (399)
T ss_dssp HHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhh
Confidence 0 0 0 0 0123468999999999999999999999999999999999998
Q ss_pred HhcC
Q 017240 308 LKHD 311 (375)
Q Consensus 308 l~~~ 311 (375)
++.+
T Consensus 324 ~~~~ 327 (399)
T 2x3n_A 324 LRDA 327 (399)
T ss_dssp HTTS
T ss_pred hccc
Confidence 8643
No 15
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.85 E-value=5.2e-20 Score=185.74 Aligned_cols=209 Identities=18% Similarity=0.203 Sum_probs=142.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhccc-----ceEEeC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWRD-----TVVYID 174 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~~-----~~~~~~ 174 (375)
..+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+...... ...+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 35899999999999999999999999999999876432 2233333 455667765433221000 011111
Q ss_pred C--CCCe---------------eecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC---C--
Q 017240 175 E--DEPI---------------LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D-- 231 (375)
Q Consensus 175 ~--~~~~---------------~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g-- 231 (375)
. .... ....+...+++..+.+.|.+.+.+. ++ +++|+++..+++ .++|++.+ |
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~-~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDD-HVRATITDLRTGAT 180 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSS-CEEEEEEETTTCCE
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCC-EEEEEEEECCCCCE
Confidence 0 0000 0111224688899999999999876 77 999999998777 56676654 6
Q ss_pred eEEecCEEEEccCCCCcccccc--------------------c----------Cc------------eeeecCC------
Q 017240 232 MIVPCRLATVASGAASGKLLEY--------------------E----------EW------------SYIPVGG------ 263 (375)
Q Consensus 232 ~~i~a~~vI~A~G~~s~~~~~~--------------------~----------~~------------~~~p~~~------ 263 (375)
.+++||+||+|||++|.++..+ . .+ .++|...
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 260 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGLYRL 260 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcEEEE
Confidence 5799999999999998653110 0 00 0011100
Q ss_pred ------------------------CC------------------CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHH
Q 017240 264 ------------------------SL------------------PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYA 301 (375)
Q Consensus 264 ------------------------~~------------------~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a 301 (375)
.. .+..++|+++|||||.++|..|||+|.+|+||..++
T Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La 340 (549)
T 2r0c_A 261 TVGVDDASKSTMDSFELVRRAVAFDTEIEVLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLG 340 (549)
T ss_dssp EEECSTTCCSCCCHHHHHHHHBCSCCCCEEEEEEEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHHHhCCCCceeEEEEecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHH
Confidence 00 023578999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCccccc
Q 017240 302 SAIAYILKHDHSRGRLT 318 (375)
Q Consensus 302 ~~i~~~l~~~~~~~~L~ 318 (375)
+.|+..+++......|.
T Consensus 341 ~~La~~l~g~a~~~lL~ 357 (549)
T 2r0c_A 341 WKLAATLRGWAGPGLLA 357 (549)
T ss_dssp HHHHHHHHTCSCTTTTH
T ss_pred HHHHHHHcCCCCHHHHH
Confidence 99999987654444443
No 16
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.84 E-value=3.1e-20 Score=188.56 Aligned_cols=237 Identities=16% Similarity=0.132 Sum_probs=151.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC------CCcEEEECCCCCCCCC----CcCcHHHHHhcCCchhhh-------hhccc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL------GLNVGLIGPDLPFTNN----YGVWEDEFRDLGLEGCIE-------HVWRD 168 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~------G~~V~liE~~~~~~~~----~g~~~~~l~~~g~~~~~~-------~~~~~ 168 (375)
.++||+||||||+|+++|+.|++. |++|+||||....+.. ..+..+.++.+ ++.... .....
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l-l~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL-FPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH-CTTHHHHTCCCCEECCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH-HHHHHhcCCceeeeechh
Confidence 358999999999999999999999 9999999998654321 12233333332 111100 00011
Q ss_pred ceEEeCCCCCee--------e-cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEec------CC
Q 017240 169 TVVYIDEDEPIL--------I-GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACE------HD 231 (375)
Q Consensus 169 ~~~~~~~~~~~~--------~-~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~------~g 231 (375)
...++....... . ......+++..+.+.|.+.+++.|++|+ ++.|+++..++++ ++.|++. +|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 111222111000 0 1112368899999999999999999999 9999999887643 4457765 33
Q ss_pred ---------eEEecCEEEEccCCCCccccc-------------------------c------cCc---------------
Q 017240 232 ---------MIVPCRLATVASGAASGKLLE-------------------------Y------EEW--------------- 256 (375)
Q Consensus 232 ---------~~i~a~~vI~A~G~~s~~~~~-------------------------~------~~~--------------- 256 (375)
.+++||+||+|+|.+|.+... . .+.
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~g 272 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYG 272 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCE
T ss_pred CcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCC
Confidence 589999999999998853200 0 000
Q ss_pred --eeeecC---C-----------------------------C--------------------------C-CccCCCEEEE
Q 017240 257 --SYIPVG---G-----------------------------S--------------------------L-PNTEQRNLAF 275 (375)
Q Consensus 257 --~~~p~~---~-----------------------------~--------------------------~-~~~~~~v~li 275 (375)
..+|.. . + . .+..++++++
T Consensus 273 g~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~Lv 352 (584)
T 2gmh_A 273 GSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLI 352 (584)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEEC
T ss_pred ceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEE
Confidence 001100 0 0 0 0234689999
Q ss_pred ccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCC--CccccccccchhHHHHHHHHhhC-chhhHHHHHHHH
Q 017240 276 GAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH--SRGRLTHEQSNENISMQAWNTLW-PQERKRQRAFFL 347 (375)
Q Consensus 276 Gdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~--~~~~L~~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~ 347 (375)
|||||.++|..|+|++.|+.+|..+|+.|.+.++.++ ...... ....|++.++..| .++.+..+.++.
T Consensus 353 GDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~----~L~~Ye~~r~~~~v~~~l~~~r~~~~ 423 (584)
T 2gmh_A 353 GCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGL----HVTEYEDNLKNSWVWKELYSVRNIRP 423 (584)
T ss_dssp TTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSC----CCTHHHHHHHTSHHHHHHHHTTTTTG
T ss_pred cccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhh----hHHHHHHHHHHhHHHHHHHHHhChhH
Confidence 9999999999999999999999999999999987552 222100 0247887777665 444444443333
No 17
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.84 E-value=3.1e-20 Score=180.60 Aligned_cols=142 Identities=21% Similarity=0.259 Sum_probs=98.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc-EEEECCCCCCC-CCCc--CcH---HHHHhcCCchhhhhhcc--cceEEeCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDLPFT-NNYG--VWE---DEFRDLGLEGCIEHVWR--DTVVYIDEDE 177 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~-V~liE~~~~~~-~~~g--~~~---~~l~~~g~~~~~~~~~~--~~~~~~~~~~ 177 (375)
.+||+||||||+|+++|+.|++.|++ |+|||+..... ...| ++. +.++.+|+.+.+..... ....+.+...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 48999999999999999999999999 99999876432 1222 233 45667777544332110 1111111111
Q ss_pred Cee----------ecCCceeecHHHHHHHHHHHHHH-CC-ceEE-EEEEEEEEEcCCceEEEEecC---C--eEEecCEE
Q 017240 178 PIL----------IGRAYGRVSRHLLHEELLRRCVE-SG-VSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLA 239 (375)
Q Consensus 178 ~~~----------~~~~~~~v~~~~l~~~L~~~~~~-~g-v~i~-~~~v~~i~~~~~~~~~V~~~~---g--~~i~a~~v 239 (375)
... +..+...+++..|.+.|.+.+.+ .| ++++ +++|+++.. ++ .+.|++.+ | .++.||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~v~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-GRVLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-TEEEEEEEETTSCEEEEEESEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-ccEEEEecCCCCCceEEecCEE
Confidence 100 11223468999999999999987 46 5888 999999988 55 46676654 6 57999999
Q ss_pred EEccCCCCccc
Q 017240 240 TVASGAASGKL 250 (375)
Q Consensus 240 I~A~G~~s~~~ 250 (375)
|+|||.+|.++
T Consensus 162 V~AdG~~S~vR 172 (410)
T 3c96_A 162 VGADGIHSAVR 172 (410)
T ss_dssp EECCCTTCHHH
T ss_pred EECCCccchhH
Confidence 99999988653
No 18
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.84 E-value=4.9e-20 Score=189.09 Aligned_cols=212 Identities=19% Similarity=0.205 Sum_probs=145.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-CCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhc---ccceEEeCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVW---RDTVVYIDE 175 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~---~~~~~~~~~ 175 (375)
..+||+||||||+||++|+.|++ .|++|+|||+..... ...+++. +.++.+|+.+.+.... .....+...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 999999999875432 3334443 4566777755433211 111111110
Q ss_pred ----CCC-----------eeecCCceeecHHHHHHHHHHHHHHCCc--eEE-EEEEEEEEEcCC---ceEEEEec-----
Q 017240 176 ----DEP-----------ILIGRAYGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS---GHRLVACE----- 229 (375)
Q Consensus 176 ----~~~-----------~~~~~~~~~v~~~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~---~~~~V~~~----- 229 (375)
... .....+...+++..+.+.|.+.+.+.|+ +++ +++|+++..+++ ..++|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 100 0001122368899999999999999887 998 999999988752 14666654
Q ss_pred -CC--eEEecCEEEEccCCCCcccccc------------------------cC---c----------eeeec--------
Q 017240 230 -HD--MIVPCRLATVASGAASGKLLEY------------------------EE---W----------SYIPV-------- 261 (375)
Q Consensus 230 -~g--~~i~a~~vI~A~G~~s~~~~~~------------------------~~---~----------~~~p~-------- 261 (375)
+| .+++||+||+|||++|.++..+ .. . .++|.
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r~ 270 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVRF 270 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEEE
Confidence 45 5799999999999998653110 00 0 00110
Q ss_pred ----CC--------------------------C---------------------CCcc------------CCCEEEEccC
Q 017240 262 ----GG--------------------------S---------------------LPNT------------EQRNLAFGAA 278 (375)
Q Consensus 262 ----~~--------------------------~---------------------~~~~------------~~~v~liGda 278 (375)
.. + ..+. .++|+++|||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDA 350 (639)
T 2dkh_A 271 YVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEVKNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDA 350 (639)
T ss_dssp EEECC-----------CCCHHHHHHHHHHHHTTSCEEEEEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGG
T ss_pred EEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcceeeeEEEecccccchhhhhhccccccccccCccCcEEEEecc
Confidence 00 0 0122 6799999999
Q ss_pred CCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCCcccc
Q 017240 279 ASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRL 317 (375)
Q Consensus 279 a~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~~~~L 317 (375)
||.++|..|||+|.+|.+|..+++.|+..+++......|
T Consensus 351 AH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL 389 (639)
T 2dkh_A 351 CHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELL 389 (639)
T ss_dssp TEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGG
T ss_pred cccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 999999999999999999999999999999765444444
No 19
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.84 E-value=6.2e-20 Score=188.85 Aligned_cols=211 Identities=18% Similarity=0.203 Sum_probs=145.4
Q ss_pred cccEEEECCCHHHHHHHHHHHH-----CCCcEEEECCCCCC---CCCCcCcH---HHHHhcCCchhhhhhc---ccceEE
Q 017240 107 ILDLVVIGCGPAGLALAAESAK-----LGLNVGLIGPDLPF---TNNYGVWE---DEFRDLGLEGCIEHVW---RDTVVY 172 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~-----~G~~V~liE~~~~~---~~~~g~~~---~~l~~~g~~~~~~~~~---~~~~~~ 172 (375)
.+||+||||||+||++|+.|++ .|++|+|||+.... +...+++. +.|+.+|+.+.+.... ....++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5899999999999999999999 99999999987542 23344544 5567778765443211 111111
Q ss_pred eCCCC-Ce------------eecCCceeecHHHHHHHHHHHHHHCC---ceEE-EEEEEEEEEcC-------CceEEEEe
Q 017240 173 IDEDE-PI------------LIGRAYGRVSRHLLHEELLRRCVESG---VSYL-SSKVESITEST-------SGHRLVAC 228 (375)
Q Consensus 173 ~~~~~-~~------------~~~~~~~~v~~~~l~~~L~~~~~~~g---v~i~-~~~v~~i~~~~-------~~~~~V~~ 228 (375)
..... .. ....+...+++..+.+.|.+.+.+.| ++++ +++|+++..++ +..++|++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 11110 00 00112236899999999999999876 8999 99999998765 12455544
Q ss_pred c------------------------------------------CC--eEEecCEEEEccCCCCcccccc-----------
Q 017240 229 E------------------------------------------HD--MIVPCRLATVASGAASGKLLEY----------- 253 (375)
Q Consensus 229 ~------------------------------------------~g--~~i~a~~vI~A~G~~s~~~~~~----------- 253 (375)
. +| ++++||+||+|||++|.++..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~ 247 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY 247 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE
Confidence 2 35 5799999999999999764110
Q ss_pred -------------cC-----------c---eeeec-------------C-------------------------CC----
Q 017240 254 -------------EE-----------W---SYIPV-------------G-------------------------GS---- 264 (375)
Q Consensus 254 -------------~~-----------~---~~~p~-------------~-------------------------~~---- 264 (375)
.. . .++|. . .+
T Consensus 248 ~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~ 327 (665)
T 1pn0_A 248 IWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFD 327 (665)
T ss_dssp EEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCE
T ss_pred EEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccCc
Confidence 00 0 00110 0 00
Q ss_pred -----------------CCcc-CCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCCCcccc
Q 017240 265 -----------------LPNT-EQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRL 317 (375)
Q Consensus 265 -----------------~~~~-~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~~~~~L 317 (375)
..+. .++|+++|||+|.++|..|||+|.+|+++..+++.|+..+++......|
T Consensus 328 ~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~a~~~lL 398 (665)
T 1pn0_A 328 VQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDIL 398 (665)
T ss_dssp EEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGG
T ss_pred eeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 0123 5799999999999999999999999999999999999999764444444
No 20
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.84 E-value=5.7e-20 Score=178.09 Aligned_cols=140 Identities=19% Similarity=0.214 Sum_probs=98.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC-----CCCcCc----HHHHHhcCCchhhhhhcc-cceEEeCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-----NNYGVW----EDEFRDLGLEGCIEHVWR-DTVVYIDED 176 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~-----~~~g~~----~~~l~~~g~~~~~~~~~~-~~~~~~~~~ 176 (375)
.+||+||||||+|+++|+.|++.|++|+|||+..... ..+.++ .+.++.+|+.+.+..... ....+.+..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 5899999999999999999999999999999875422 222222 356777787554432111 000111111
Q ss_pred CCeee--------cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 177 EPILI--------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 177 ~~~~~--------~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
..... ......+++..|.+.|.+.+.+ ++++ +++|+++..+++ .+.|++.+|.++.+|+||+|||.+|
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKK-KWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSS-SEEEEETTSCCEEESEEEECSCTTC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCC-EEEEEECCCcEEecCEEEECCCcch
Confidence 11100 0112368899999999887753 6788 999999988776 5788898888899999999999988
Q ss_pred cc
Q 017240 248 GK 249 (375)
Q Consensus 248 ~~ 249 (375)
.+
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 64
No 21
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.82 E-value=7.4e-19 Score=170.18 Aligned_cols=139 Identities=16% Similarity=0.129 Sum_probs=97.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC-C-CCCc--CcH---HHHHhcCCchhhhhhcc-cceEEeCC--
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF-T-NNYG--VWE---DEFRDLGLEGCIEHVWR-DTVVYIDE-- 175 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~-~-~~~g--~~~---~~l~~~g~~~~~~~~~~-~~~~~~~~-- 175 (375)
..+||+||||||+|+++|+.|++.|++|+|||+.... . ...| ++. +.++.+|+.. ...... ....+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCC
Confidence 3589999999999999999999999999999987643 1 1222 333 4567777755 111111 11112221
Q ss_pred CCCe-eecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 176 DEPI-LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 176 ~~~~-~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
.... ....+...+++..+.+.|.+.+ .|++++ +++|+++..+++ .+.|++.+|.++.+|+||+|||.+|.
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSE-TVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSS-CEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCC-EEEEEECCCCEEECCEEEECCCcchh
Confidence 1111 1112223466778888888765 589999 999999998776 57888999988999999999999875
No 22
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.81 E-value=1.7e-19 Score=173.57 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=99.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CCCcCcH---HHHHhcCCchhhhhhcc--cceEEeCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVWE---DEFRDLGLEGCIEHVWR--DTVVYIDEDEP 178 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~~g~~~---~~l~~~g~~~~~~~~~~--~~~~~~~~~~~ 178 (375)
.+||+||||||+|+++|+.|++.|++|+|||+..... ...+++. +.++.+|+.+.+..... ....+......
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4899999999999999999999999999999876542 2222332 45666776544322111 11111111111
Q ss_pred e-ee---cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 179 I-LI---GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 179 ~-~~---~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
. .. +.+...+++..+.+.|.+.+.+.|++++ +++|+++.. + . .|++.+|.++.+|+||+|||.+|..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--V-G-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--T-T-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--C-C-EEEECCCCEEEcCEEEECCCccHHH
Confidence 0 00 2234578999999999999999999999 999999976 4 3 7888888889999999999998753
No 23
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.79 E-value=1.8e-18 Score=174.06 Aligned_cols=199 Identities=17% Similarity=0.152 Sum_probs=133.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---CCCcEEEECCCCCCCCC--CcCcH---H-HHHhcCCchh--hhhh---------
Q 017240 106 GILDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNN--YGVWE---D-EFRDLGLEGC--IEHV--------- 165 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~---~G~~V~liE~~~~~~~~--~g~~~---~-~l~~~g~~~~--~~~~--------- 165 (375)
..+||+|||||++|+++|+.|++ .|++|+|||+....... .+++. . .++.+|+... +...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 35899999999999999999999 99999999986432211 12222 3 4555666432 2110
Q ss_pred ---ccc------c-eEEeCCCC-----Ce----------------e------------------------ecCCc-eeec
Q 017240 166 ---WRD------T-VVYIDEDE-----PI----------------L------------------------IGRAY-GRVS 189 (375)
Q Consensus 166 ---~~~------~-~~~~~~~~-----~~----------------~------------------------~~~~~-~~v~ 189 (375)
|.. . ..+..... .. . +..++ ..++
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~ 163 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFD 163 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEEC
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEe
Confidence 110 0 00000000 00 0 00122 3789
Q ss_pred HHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEecCCeEEecCEEEEccCCCCcccccc--------------
Q 017240 190 RHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEY-------------- 253 (375)
Q Consensus 190 ~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~-------------- 253 (375)
+..+.+.|.+.+.+.|++++ + +|+++..++++ .+.|++.+|.++.||+||+|+|.+|..+...
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~ 242 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLC 242 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccccccccc
Confidence 99999999999999999999 7 89999876543 4678888888899999999999987653100
Q ss_pred --------c-------C-------------ceeeecC----------------------------C-C------------
Q 017240 254 --------E-------E-------------WSYIPVG----------------------------G-S------------ 264 (375)
Q Consensus 254 --------~-------~-------------~~~~p~~----------------------------~-~------------ 264 (375)
. . .+.+|.. . +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~g~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (538)
T 2aqj_A 243 DSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGRFGSGYVFSSHFTSRDQATADFLKLWGLSDNQPLNQIKFRVG 322 (538)
T ss_dssp CEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTEEEEEEEECTTTSCHHHHHHHHHHHHTCCTTCCCEEEECCCE
T ss_pred ceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCceEEEEEEcCCCCChHHHHHHHHHHhcCCCCCCceEEeeccc
Confidence 0 0 0111200 0 0
Q ss_pred --CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 265 --LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 265 --~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.++..++++++|||+|.++|..|+|++.++.++..+++.|.
T Consensus 323 ~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~ 365 (538)
T 2aqj_A 323 RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFP 365 (538)
T ss_dssp EESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred cccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhh
Confidence 01345799999999999999999999999999988876653
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.79 E-value=3.7e-18 Score=171.36 Aligned_cols=198 Identities=20% Similarity=0.257 Sum_probs=134.0
Q ss_pred cccEEEECCCHHHHHHHHHHHH------------CCCcEEEECCCCCCCC--CCcCcH---HHHHhcCCchh--hhhh--
Q 017240 107 ILDLVVIGCGPAGLALAAESAK------------LGLNVGLIGPDLPFTN--NYGVWE---DEFRDLGLEGC--IEHV-- 165 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~------------~G~~V~liE~~~~~~~--~~g~~~---~~l~~~g~~~~--~~~~-- 165 (375)
.+||+||||||+|+++|+.|++ .|++|+|||+...... ..+++. ..++.+|+.+. +...
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~~ 86 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCDA 86 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcCC
Confidence 4799999999999999999999 9999999998643221 122332 45666777553 2211
Q ss_pred ----------ccc------ceE---EeCCC-----CCe------------------------------------e--ecC
Q 017240 166 ----------WRD------TVV---YIDED-----EPI------------------------------------L--IGR 183 (375)
Q Consensus 166 ----------~~~------~~~---~~~~~-----~~~------------------------------------~--~~~ 183 (375)
|.. ... .+... ... . ...
T Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~ 166 (526)
T 2pyx_A 87 SFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQN 166 (526)
T ss_dssp EEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSS
T ss_pred EEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCCC
Confidence 211 000 01100 000 0 001
Q ss_pred Cc-eeecHHHHHHHHHHHHHH-CCceEE-EEEEEEEEEcCCc-eEEEEecCCeEEecCEEEEccCCCCccccc-----c-
Q 017240 184 AY-GRVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLE-----Y- 253 (375)
Q Consensus 184 ~~-~~v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~-~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~-----~- 253 (375)
++ ..+++..+.+.|.+.+++ .|++++ + +|+++..++++ .+.|++.+|.++.||+||+|||.+|..+.. +
T Consensus 167 ~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~ 245 (526)
T 2pyx_A 167 NYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFL 245 (526)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEE
T ss_pred CeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcc
Confidence 12 268999999999999999 899999 7 69999876543 457788887679999999999998765210 0
Q ss_pred ------------------c-----------------C-ceeeecC-----------------------------------
Q 017240 254 ------------------E-----------------E-WSYIPVG----------------------------------- 262 (375)
Q Consensus 254 ------------------~-----------------~-~~~~p~~----------------------------------- 262 (375)
. + .+.+|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~~~~l~ 325 (526)
T 2pyx_A 246 SQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKGVGYVYSSSHTNDIDAQKTLFNYLGVDGAAAD 325 (526)
T ss_dssp ECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEEEEEEECTTTCCHHHHHHHHHHHHTCCHHHHH
T ss_pred cccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceEEEEEecCCCCChHHHHHHHHHHHHhcCcccc
Confidence 0 0 0111210
Q ss_pred -CC-----------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 263 -GS-----------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 263 -~~-----------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.. ..+..++++++|||+|.++|..|+|++.++.++..+++.|.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 326 KLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp HCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred cCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 00 01235799999999999999999999999999998887764
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.77 E-value=9.2e-18 Score=169.34 Aligned_cols=199 Identities=19% Similarity=0.213 Sum_probs=134.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---CCCcEEEECCCCCCCCC--CcCc---HH-HHHhcCCchh--hhh----------
Q 017240 106 GILDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNN--YGVW---ED-EFRDLGLEGC--IEH---------- 164 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~---~G~~V~liE~~~~~~~~--~g~~---~~-~l~~~g~~~~--~~~---------- 164 (375)
..+||||||||++|+++|+.|++ .|++|+|||+....... .+++ .. .++.+|+.+. +..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~ 103 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIK 103 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeee
Confidence 35899999999999999999999 99999999986432211 2222 23 4556676533 221
Q ss_pred --hcccc---------------eEEeCCC-----------------------C-C---e-----ee--------------
Q 017240 165 --VWRDT---------------VVYIDED-----------------------E-P---I-----LI-------------- 181 (375)
Q Consensus 165 --~~~~~---------------~~~~~~~-----------------------~-~---~-----~~-------------- 181 (375)
.|... ..+.... . . . ..
T Consensus 104 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (550)
T 2e4g_A 104 FINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSK 183 (550)
T ss_dssp EESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCB
T ss_pred EeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCC
Confidence 11110 0000000 0 0 0 00
Q ss_pred cCCce-eecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcCCc-eEEEEecCCeEEecCEEEEccCCCCcccccc----
Q 017240 182 GRAYG-RVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEY---- 253 (375)
Q Consensus 182 ~~~~~-~v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~-~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~---- 253 (375)
..+++ .+++..+.+.|.+.+++. |++++ + +|+++..++++ .+.|++.+|.++.||+||+|+|.+|..+...
T Consensus 184 ~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 184 VTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 11222 589999999999999998 99999 7 99999876543 4678888888899999999999877552100
Q ss_pred ---------------------------cCc-----------eeeecC----------------------------CC--C
Q 017240 254 ---------------------------EEW-----------SYIPVG----------------------------GS--L 265 (375)
Q Consensus 254 ---------------------------~~~-----------~~~p~~----------------------------~~--~ 265 (375)
... +.+|.. .. +
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~~~~g~v~~~~~~~~~~~~~~l~~~~~~~p~l 342 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGRFGTGYVYSSRFATEDEAVREFCEMWHLDPET 342 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSEEEEEEEECTTTSCHHHHHHHHHHHTTCCTTT
T ss_pred cccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCccceEEEEecCCCChHHHHHHHHHhhCcCccc
Confidence 000 112210 00 0
Q ss_pred --------------CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 266 --------------PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 266 --------------~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
....+++++||||+|.++|..|+|++.++.++..+++.|.
T Consensus 343 ~~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~ 396 (550)
T 2e4g_A 343 QPLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP 396 (550)
T ss_dssp SCCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred CCCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc
Confidence 1235789999999999999999999999999998887664
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.76 E-value=5.6e-18 Score=169.37 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=90.8
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEecCCeEEecCEEEEccCCCCccccc------------
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLE------------ 252 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~------------ 252 (375)
.+++..+.+.|.+.+.+.|++++ + +|+++..++++ .+.|++.+|+++.||+||+|||.+|..+..
T Consensus 169 ~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~ 247 (511)
T 2weu_A 169 HFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDV 247 (511)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTT
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcccccc
Confidence 78999999999999999999999 7 99999875543 467888888889999999999998765310
Q ss_pred c------------c-C----------------ceeeecC----------------------------CC--C--------
Q 017240 253 Y------------E-E----------------WSYIPVG----------------------------GS--L-------- 265 (375)
Q Consensus 253 ~------------~-~----------------~~~~p~~----------------------------~~--~-------- 265 (375)
. . . .+.+|.. .. +
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 327 (511)
T 2weu_A 248 LPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFKRDGNGYVYSDEFISPEEAERELRSTVAPGRDDLEANHIQM 327 (511)
T ss_dssp CCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSSEEEEEEEECTTTSCHHHHHHHHHHHHCTTCTTSCCEEEEC
T ss_pred CcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCCceEEEEEECCCCCCHHHHHHHHHHHhCcccccccceeEEe
Confidence 0 0 0 0111210 00 0
Q ss_pred ------CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 266 ------PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 266 ------~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
....++++++||++|.++|..|+|++.++.++..+++.|.
T Consensus 328 ~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~ 373 (511)
T 2weu_A 328 RIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFP 373 (511)
T ss_dssp CCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred eccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhc
Confidence 1234799999999999999999999999999998887765
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.74 E-value=2.6e-18 Score=165.47 Aligned_cols=185 Identities=17% Similarity=0.159 Sum_probs=117.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCC---CCCCcCcHHHHHh---cCCc-hh-hhh---hcccceEEeC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPF---TNNYGVWEDEFRD---LGLE-GC-IEH---VWRDTVVYID 174 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~---~~~~g~~~~~l~~---~g~~-~~-~~~---~~~~~~~~~~ 174 (375)
.||+||||||+|+++|+.|++. |++|+|||+.... +....++...+.. .++. .. +.. .+....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 9999999987654 2221111111110 0111 11 110 011111111
Q ss_pred CCCCee--ecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc
Q 017240 175 EDEPIL--IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (375)
Q Consensus 175 ~~~~~~--~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~ 251 (375)
.+.... .+.++..+++..+.+.|.+.+.+.|++++ +++|+++... .++.+|+||+|||.+|. +.
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S~-R~ 146 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNHK-TA 146 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGGG-TC
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCCCch-HH
Confidence 111111 12334478999999999999999999999 9888766421 12467888888887764 21
Q ss_pred cc------------------------c-----------Cc---eeeec--------------------------------
Q 017240 252 EY------------------------E-----------EW---SYIPV-------------------------------- 261 (375)
Q Consensus 252 ~~------------------------~-----------~~---~~~p~-------------------------------- 261 (375)
.+ . ++ ..+|.
T Consensus 147 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (381)
T 3c4a_A 147 HFTEALVPQVDYGRNKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEY 226 (381)
T ss_dssp CSSGGGCCCCEEEEEEEEEEEESSCCSSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHH
T ss_pred hhhhhcCCCcccCCccEEEEecCCCCCcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHH
Confidence 00 0 00 00110
Q ss_pred ---------------CC---C---------CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 262 ---------------GG---S---------LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 262 ---------------~~---~---------~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
.. . ..+..++++++|||||.++|.+|||++.|+.+|..+++.|..
T Consensus 227 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 227 VAKVFQAELGGHGLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp HHHHTHHHHTTCCCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCchhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 00 0 012346899999999999999999999999999999999976
No 28
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.71 E-value=2.6e-16 Score=135.18 Aligned_cols=167 Identities=19% Similarity=0.166 Sum_probs=122.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
+||+|||||++|+.+|..|++.|.+|+|||+......... .+. .. + +.+ ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------~~~---------------~~-~---~~~-~~ 52 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------RVP---------------NY-P---GLL-DE 52 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------CCC---------------CS-T---TCT-TC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------hhh---------------cc-C---CCc-CC
Confidence 7999999999999999999999999999998752211100 000 00 0 000 01
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc----cccCceeeecC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL----EYEEWSYIPVG 262 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~----~~~~~~~~p~~ 262 (375)
+....+.+.+.+.+++.|++++ + +|+++..+++ .+.|++++| ++.+|.||+|+|..+..+. ++. ...+.++
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~-~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~~~-~g~i~vd 128 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG-VFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLTRR-GAYIDTD 128 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS-SEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCCEE-TTEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC-EEEEEECCC-EEEECEEEECCCCCCCccccCCCCcc-CceEEeC
Confidence 4567889999999999999999 7 9999988766 578888888 8999999999998874321 112 3334444
Q ss_pred CCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 263 GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 263 ~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
..+....++++++||.+....|. ...|+.++..+|..|...+++.
T Consensus 129 ~~~~t~~~~i~a~GD~~~~~~~~----~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 129 EGGRTSYPRVYAAGVARGKVPGH----AIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp TTCBCSSTTEEECGGGGTCCSCC----HHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcCCCCEEEeecccCcchhh----HHHHHHhHHHHHHHHHHHhhhc
Confidence 45555567999999998876542 4678899999999998887653
No 29
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.65 E-value=2.5e-15 Score=139.93 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=79.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
++.|||+||||||||++||+.|++.|++|+|||++...+.-. ..+.. +. .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~-----------------~~~~~----~~---------~ 53 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVT-----------------QNSHG----FI---------T 53 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGS-----------------SCBCC----ST---------T
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeee-----------------eecCC----cc---------C
Confidence 457999999999999999999999999999999875432100 00000 00 0
Q ss_pred ceeecHHHHHHHHHHHHHHCC-ceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRCVESG-VSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~g-v~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
+..+...++.+...+.+.+.+ +.++...++.+...+++.+.|.+.+|+++.+|.||+|||+.+.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 54 RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 012455667766667676655 5555777777766655567888999999999999999997643
No 30
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.63 E-value=5.6e-15 Score=132.39 Aligned_cols=124 Identities=13% Similarity=0.009 Sum_probs=86.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHH-HHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDE-FRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~-l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+||+|||||++|+++|+.|++.|.+|+|||+.... .|.+... +..+.... +...+. + ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~---~G~~~~~~~~~~~~~~-~~~~~~------d---------~~ 63 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA---VMMPFLPPKPPFPPGS-LLERAY------D---------PK 63 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG---TTCCSSCCCSCCCTTC-HHHHHC------C---------TT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc---CCcccCccccccchhh-HHhhhc------c---------CC
Confidence 489999999999999999999999999999987321 1110000 00000000 000000 0 00
Q ss_pred eeecHHHHHHHHHHHHHHC-CceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 186 GRVSRHLLHEELLRRCVES-GVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~-gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
+. ++..+.+.|.+.+++. |+++++++|+++..+++..+.|.+.+|.++.||.||+|+|.++..+
T Consensus 64 g~-~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 64 DE-RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp CC-CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred CC-CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 11 5778899999999886 9999977999998876644578888888899999999999977654
No 31
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.63 E-value=2.9e-15 Score=149.16 Aligned_cols=129 Identities=21% Similarity=0.275 Sum_probs=93.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC--CcCcH---HHHHhcCCchhhhhhcccceEEeCCCCCee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YGVWE---DEFRDLGLEGCIEHVWRDTVVYIDEDEPIL 180 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~--~g~~~---~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
..+||+||||||+|+++|+.|++.|++|+|||+....+.. .+++. +.+..+|+......+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~--------------- 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRF--------------- 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTT---------------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccc---------------
Confidence 3589999999999999999999999999999998654422 23333 233444432211100
Q ss_pred ecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcC--CceEEEEe--c-CC--eEEecCEEEEccCCCCcc
Q 017240 181 IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVAC--E-HD--MIVPCRLATVASGAASGK 249 (375)
Q Consensus 181 ~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~V~~--~-~g--~~i~a~~vI~A~G~~s~~ 249 (375)
....+..+++..+.+.|.+.+++.|++++ +++|+++..++ +..+.|++ . +| .++.+|+||+|||++|..
T Consensus 156 ~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 156 CTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp TCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred cccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 00112357788999999999999999999 99999998642 22566766 3 55 579999999999998855
No 32
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.62 E-value=1.4e-14 Score=135.18 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=75.2
Q ss_pred CCCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC--CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 104 GNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN--NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 104 ~~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~--~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
++.+|||+||||||||++||+.|++.|++|+|||+..+.+. +.+.. + .
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i---------~---------------------~ 52 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEV---------E---------------------N 52 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCB---------C---------------------C
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeeccccc---------C---------------------C
Confidence 34569999999999999999999999999999998754331 11110 0 0
Q ss_pred cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 182 GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 182 ~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
-+.+..+...++.....+...+.+..+. ...+........ .+...+++++.+|.+|+|||+.+
T Consensus 53 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 53 FPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEY---KVINFGNKELTAKAVIIATGAEY 116 (312)
T ss_dssp STTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSC---EEEECSSCEEEEEEEEECCCEEE
T ss_pred cCCccccchHHHHHHHHHHHhhccccccceeeeeeeeeecc---eeeccCCeEEEeceeEEcccCcc
Confidence 0011234556777777777777777776 544444433322 34455667999999999999754
No 33
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.60 E-value=2.2e-14 Score=133.67 Aligned_cols=117 Identities=20% Similarity=0.235 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC-CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
.|||+||||||||++||+.|++.|++|+|||+....+. ..|.... ...+ .+ .+ +.+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~----------------~~~i--~~-~~---g~~- 60 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTT----------------TTII--EN-FP---GFP- 60 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGG----------------SSEE--CC-ST---TCT-
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCC----------------hHHh--hh-cc---CCc-
Confidence 59999999999999999999999999999998753321 1122100 0000 00 00 001
Q ss_pred eeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
..++..++...+.+.+.+.++++....+.......+ ...+.+.++.++.+|.||+|||+.+
T Consensus 61 ~~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 61 NGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQ-PFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp TCEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSS-SEEEEETTCCEEEEEEEEECCCEEE
T ss_pred ccCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCC-ceEEEECCCeEEEEeEEEEcccccc
Confidence 125677888888999999999988656666665555 5667778888999999999999754
No 34
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.60 E-value=5e-15 Score=144.84 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=63.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC----CC--C-CcCcH---HHHHhcCCchhh--hhhcccceEEeC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF----TN--N-YGVWE---DEFRDLGLEGCI--EHVWRDTVVYID 174 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~----~~--~-~g~~~---~~l~~~g~~~~~--~~~~~~~~~~~~ 174 (375)
.+||+||||||+|+++|+.|++.|++|+|||+.... +. . ...+. ..+..+|+.... ............
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 101 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYVG 101 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEEC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEEC
Confidence 479999999999999999999999999999987521 11 1 11122 223345442211 111111222222
Q ss_pred CCCCeee----cCCceeecHHHHHHHHHHHHHHCCceEE
Q 017240 175 EDEPILI----GRAYGRVSRHLLHEELLRRCVESGVSYL 209 (375)
Q Consensus 175 ~~~~~~~----~~~~~~v~~~~l~~~L~~~~~~~gv~i~ 209 (375)
......+ ..+...+++..+...|.+.+++.|++++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~ 140 (430)
T 3ihm_A 102 GPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFC 140 (430)
T ss_dssp SSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEE
Confidence 2111111 1122368899999999999999999887
No 35
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.58 E-value=8.7e-15 Score=138.34 Aligned_cols=160 Identities=19% Similarity=0.205 Sum_probs=103.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+|||||++|+++|+.|++.|++|+|||+....+.. |......+.+.. ..... .+... +.. .....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~---~~~~~~~~~~~~--~~~~~----~~~~~-~~~-~~~~~ 71 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA---WQHAWHSLHLFS--PAGWS----SIPGW-PMP-ASQGP 71 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG---GGGSCTTCBCSS--CGGGS----CCSSS-CCC-CCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc---ccCCCCCcEecC--chhhh----hCCCC-CCC-CCccC
Confidence 489999999999999999999999999999998655432 221100000000 00000 00000 000 01112
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEE-EEecCCeEEecCEEEEccCCCCccc-ccccC------ce
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRL-VACEHDMIVPCRLATVASGAASGKL-LEYEE------WS 257 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~-V~~~~g~~i~a~~vI~A~G~~s~~~-~~~~~------~~ 257 (375)
..++..+.+.+.+.+++.|++++ +++|+++..+++ .+. |++.+| ++.+|.||+|+|.++... ..+.+ ..
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~ 149 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE-RLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQ 149 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT-EEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEE
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC-cEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcE
Confidence 35678899999999999999999 999999998877 677 888888 899999999999866432 11111 11
Q ss_pred ee--ecCCCCCccCCCEEEEccCC
Q 017240 258 YI--PVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~~--p~~~~~~~~~~~v~liGdaa 279 (375)
+. .........++++++||.+.
T Consensus 150 ~~~~~~~~~~~~~~~~v~VvG~G~ 173 (357)
T 4a9w_A 150 LHSAHYSTPAPFAGMRVAIIGGGN 173 (357)
T ss_dssp EEGGGCCCSGGGTTSEEEEECCSH
T ss_pred EEeccCCChhhcCCCEEEEECCCc
Confidence 11 11222234568999999774
No 36
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.57 E-value=1.5e-14 Score=140.70 Aligned_cols=138 Identities=21% Similarity=0.238 Sum_probs=90.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC-------------cC------------cHHHHHhcCCc
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-------------GV------------WEDEFRDLGLE 159 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-------------g~------------~~~~l~~~g~~ 159 (375)
+..+||+|||||++|+++|+.|++.|++|+|||+....+... .. ....+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 346899999999999999999999999999999987543110 00 01111111111
Q ss_pred hhhhhhcccceEEeCCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCE
Q 017240 160 GCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRL 238 (375)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~ 238 (375)
+...........+.... .+..+.......+.+.|.+.+++.|++++ +++|+++..+++ .+.|++.+| ++.||.
T Consensus 105 ~~~~~~~~~Gi~~~~~~----~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~~~V~~~~g-~i~ad~ 178 (417)
T 3v76_A 105 DFVALVERHGIGWHEKT----LGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-GFRVTTSAG-TVDAAS 178 (417)
T ss_dssp HHHHHHHHTTCCEEECS----TTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETTE-EEEESE
T ss_pred HHHHHHHHcCCCcEEee----CCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECCc-EEEeeE
Confidence 11100000000000000 01111134567899999999999999999 999999988776 688889888 899999
Q ss_pred EEEccCCCCc
Q 017240 239 ATVASGAASG 248 (375)
Q Consensus 239 vI~A~G~~s~ 248 (375)
||+|+|++|.
T Consensus 179 VIlAtG~~S~ 188 (417)
T 3v76_A 179 LVVASGGKSI 188 (417)
T ss_dssp EEECCCCSSC
T ss_pred EEECCCCccC
Confidence 9999999984
No 37
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.54 E-value=4.7e-14 Score=132.66 Aligned_cols=137 Identities=14% Similarity=0.161 Sum_probs=78.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC------------cC---------cHHHHHhcCCchhhhhhc
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY------------GV---------WEDEFRDLGLEGCIEHVW 166 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~------------g~---------~~~~l~~~g~~~~~~~~~ 166 (375)
+||+|||||++|+++|+.|++.|++|+|||+....+... +. +.+.++.+... .....|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ-GHVAEW 81 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH-TSEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC-CCeeec
Confidence 799999999999999999999999999999986432100 00 11111111100 001111
Q ss_pred ccceEEeCCCCCeee-cCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEE-ecCEEEEcc
Q 017240 167 RDTVVYIDEDEPILI-GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIV-PCRLATVAS 243 (375)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i-~a~~vI~A~ 243 (375)
............... ...........+ ..+.+.+.+ |++++ +++|+++..+++ .+.|++.+|..+ .+|+||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~-g~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGM-SAITRAMRG-DMPVSFSCRITEVFRGEE-HWNLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCT-HHHHHHHHT-TCCEECSCCEEEEEECSS-CEEEEETTSCEEEEESEEEECS
T ss_pred cccceeccCcccccCCCCCccEEcCccH-HHHHHHHHc-cCcEEecCEEEEEEEeCC-EEEEEeCCCcCccccCEEEEcC
Confidence 111112211100000 000011111111 122222222 89999 999999998776 688889888666 499999999
Q ss_pred CCCCc
Q 017240 244 GAASG 248 (375)
Q Consensus 244 G~~s~ 248 (375)
|+++.
T Consensus 159 g~~~~ 163 (336)
T 1yvv_A 159 PAPQA 163 (336)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98753
No 38
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.52 E-value=3.4e-14 Score=133.71 Aligned_cols=117 Identities=15% Similarity=0.236 Sum_probs=87.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+||+||||||+|+++|+.|++.|++|+|||+....+. .|... ++....+. ...+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg---~~~~~-------------~~~~~~~~--------~~~~ 59 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG---QLTAL-------------YPEKYIYD--------VAGF 59 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH---HHHHT-------------CTTSEECC--------STTC
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC---eeecc-------------CCCceeec--------cCCC
Confidence 358999999999999999999999999999999764431 11110 00000000 0011
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
..+++..+.+.+.+.+.+.+++++ +++|+.+..+++ .+.|.+.+|.++.+|.||+|+|..+
T Consensus 60 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 60 PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD-LFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT-EEEEEETTSCEEEEEEEEECCTTSE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-EEEEEECCCCEEEeCEEEECCCCCC
Confidence 235677888899998888899998 999999988766 6788888888899999999999864
No 39
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.52 E-value=4.4e-14 Score=130.20 Aligned_cols=141 Identities=13% Similarity=0.082 Sum_probs=98.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
+||+||||||+|+++|..|++.|++|+|||+.......... ... -.....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~-------------------------~~~-----~~~~~~ 52 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH-------------------------SHG-----FLGQDG 52 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC-------------------------CCS-----STTCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh-------------------------hcC-----CcCCCC
Confidence 79999999999999999999999999999987532210000 000 000113
Q ss_pred ecHHHHHHHHHHHHHHC-CceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccCc------eee-
Q 017240 188 VSRHLLHEELLRRCVES-GVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEW------SYI- 259 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~-gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~------~~~- 259 (375)
.+...+...+.+.+.+. +++++.++|+++..+++ .+.|++.+|.++.+|.||+|+|..+..+ ...+. ..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vviAtG~~~~~~-~~~g~~~~~~~~~~~ 130 (297)
T 3fbs_A 53 KAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFG-EFIVEIDGGRRETAGRLILAMGVTDELP-EIAGLRERWGSAVFH 130 (297)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETT-EEEEEETTSCEEEEEEEEECCCCEEECC-CCBTTGGGBTTTEES
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCC-eEEEEECCCCEEEcCEEEECCCCCCCCC-CCCCchhhcCCeeEE
Confidence 56678889999988886 78888779999988776 6889998888899999999999865332 11111 111
Q ss_pred -ecCCCCCccCCCEEEEccCCC
Q 017240 260 -PVGGSLPNTEQRNLAFGAAAS 280 (375)
Q Consensus 260 -p~~~~~~~~~~~v~liGdaa~ 280 (375)
+........+++++++|.+..
T Consensus 131 ~~~~~~~~~~~~~v~vvG~G~~ 152 (297)
T 3fbs_A 131 CPYCHGYELDQGKIGVIAASPM 152 (297)
T ss_dssp CHHHHTGGGTTCEEEEECCSTT
T ss_pred cccCcchhhcCCEEEEEecCcc
Confidence 011112234778999998764
No 40
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.52 E-value=5.5e-14 Score=141.19 Aligned_cols=169 Identities=16% Similarity=0.068 Sum_probs=106.4
Q ss_pred CcccEEEECCCHHHHHHHHHHH-HCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 106 GILDLVVIGCGPAGLALAAESA-KLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La-~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
..+||+|||||++|+++|+.|+ +.|++|+|||+....+.. |... .-.+....+...... ..+...........
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGt---w~~~-~ypg~~~d~~s~~~~--~~~~~~~~~~~~~~ 80 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGT---WYWN-RYPGALSDTESHLYR--FSFDRDLLQESTWK 80 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTH---HHHC-CCTTCEEEEEGGGSS--CCSCHHHHHHCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCc---cccc-CCCCceecCCcceee--eccccccccCCCCc
Confidence 3589999999999999999999 999999999998655422 2110 000110000000000 00000000000111
Q ss_pred ceeecHHHHHHHHHHHHHHCCc--eEE-EEEEEEEEEcCC-ceEEEEecCCeEEecCEEEEccCCCCcccc-cccC----
Q 017240 185 YGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASGKLL-EYEE---- 255 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~-~~~~---- 255 (375)
....++.++.+++.+.+++.|+ .++ +++|+++..+++ +.+.|++.+|+++.||.||+|+|.++.... ++.+
T Consensus 81 ~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 160 (540)
T 3gwf_A 81 TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTF 160 (540)
T ss_dssp BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCcccc
Confidence 1246788999999999999998 788 999999987654 378899999988999999999997654332 1111
Q ss_pred --ceeee--cCCCCCccCCCEEEEccCCC
Q 017240 256 --WSYIP--VGGSLPNTEQRNLAFGAAAS 280 (375)
Q Consensus 256 --~~~~p--~~~~~~~~~~~v~liGdaa~ 280 (375)
..+.. ........+++|++||.+++
T Consensus 161 ~g~~~~~~~~~~~~~~~~krV~VIG~G~s 189 (540)
T 3gwf_A 161 EGETIHTAAWPEGKSLAGRRVGVIGTGST 189 (540)
T ss_dssp CSEEEEGGGCCSSCCCTTSEEEEECCSHH
T ss_pred CCCEEEeecCCCccccccceEEEECCCch
Confidence 11221 11233456789999998853
No 41
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.52 E-value=5.8e-14 Score=133.66 Aligned_cols=117 Identities=17% Similarity=0.218 Sum_probs=87.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+||||||+|+++|+.|++.|++|+|||+....+. .|... .+....+. ...+.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg---~~~~~-------------~~~~~~~~--------~~~~~ 69 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG---QLAAL-------------YPEKHIYD--------VAGFP 69 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH---HHHHT-------------CTTSEECC--------STTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC---ccccc-------------CCCccccc--------CCCCC
Confidence 58999999999999999999999999999999754431 11100 00000000 00111
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.+++..+.+.+.+.+.+.|++++ +++|+.+...+++.+.|++.+|.++.+|.||+|+|..+
T Consensus 70 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 70 EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 35677888999999988999998 89999998875546788888888899999999999865
No 42
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.50 E-value=9.2e-14 Score=139.83 Aligned_cols=168 Identities=17% Similarity=0.084 Sum_probs=105.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhh-hhcccceEEeCCCCCeeecCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIE-HVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 184 (375)
..+||+|||||++|+++|+.|++.|++|+|||+....+..| ... .-.|+...+. +.+.- .+...........
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw---~~~-~ypg~~~dv~s~~y~~---~f~~~~~~~~~~~ 92 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW---YWN-RYPGARCDVESIDYSY---SFSPELEQEWNWS 92 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH---HHC-CCTTCBCSSCTTTSSC---CSCHHHHHHCCCS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---ccC-CCCCceeCCCchhccc---ccccccccCCCCc
Confidence 46899999999999999999999999999999986554221 100 0001100000 00000 0000000000001
Q ss_pred ceeecHHHHHHHHHHHHHHCCc--eEE-EEEEEEEEEcCC-ceEEEEecCCeEEecCEEEEccCCCCcccc-ccc-----
Q 017240 185 YGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASGKLL-EYE----- 254 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~-~~~----- 254 (375)
....++.++.+++.+.+++.|+ .++ +++|+++..+++ +.+.|++.+|+++.||.||+|+|..+.... .+.
T Consensus 93 ~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 93 EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 1235778899999999999988 788 999999987654 378899999988999999999996543221 111
Q ss_pred -CceeeecC---CCCCccCCCEEEEccCCC
Q 017240 255 -EWSYIPVG---GSLPNTEQRNLAFGAAAS 280 (375)
Q Consensus 255 -~~~~~p~~---~~~~~~~~~v~liGdaa~ 280 (375)
+..+.... ......+++|++||.++.
T Consensus 173 ~g~~~~~~~~~~~~~~~~~krV~VIG~G~s 202 (549)
T 4ap3_A 173 TGDIVHTARWPHDGVDFTGKRVGVIGTGSS 202 (549)
T ss_dssp CSEEEEGGGCCTTCCCCBTCEEEEECCSHH
T ss_pred CCceEEeccccccccccCCCEEEEECCCch
Confidence 11122211 234456889999998853
No 43
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.50 E-value=8.8e-14 Score=132.14 Aligned_cols=144 Identities=21% Similarity=0.201 Sum_probs=95.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC-----CCCcC-----------------------cHHHHHhcCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-----NNYGV-----------------------WEDEFRDLGL 158 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~-----~~~g~-----------------------~~~~l~~~g~ 158 (375)
.+||+|||||++|+++|+.|+++|++|+|||+....+ .+.|+ |.+..+.+++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGV 83 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999999999999999985221 11111 1112222222
Q ss_pred chhh----------------hhh------cccc-eEEeCCC-----------CCeeecCCceeecHHHHHHHHHHHHHHC
Q 017240 159 EGCI----------------EHV------WRDT-VVYIDED-----------EPILIGRAYGRVSRHLLHEELLRRCVES 204 (375)
Q Consensus 159 ~~~~----------------~~~------~~~~-~~~~~~~-----------~~~~~~~~~~~v~~~~l~~~L~~~~~~~ 204 (375)
.... ... ..-. ..+++.. ....+.+..+.++...+...|.+.+++.
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 163 (369)
T 3dme_A 84 PHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAESD 163 (369)
T ss_dssp CEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHHT
T ss_pred CcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHHHC
Confidence 1000 000 0000 0011000 0001112234688899999999999999
Q ss_pred CceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCccc
Q 017240 205 GVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKL 250 (375)
Q Consensus 205 gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~ 250 (375)
|++++ +++|+++..++++.+.|++.+| .++.||.||+|+|.++..+
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l 212 (369)
T 3dme_A 164 GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGL 212 (369)
T ss_dssp TCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHH
T ss_pred CCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHH
Confidence 99999 9999999987764577888887 5899999999999998554
No 44
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.50 E-value=2.2e-13 Score=133.81 Aligned_cols=141 Identities=20% Similarity=0.286 Sum_probs=91.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC-------------CcCcHHHHHhcCCchhhh----hhccc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-------------YGVWEDEFRDLGLEGCIE----HVWRD 168 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-------------~g~~~~~l~~~g~~~~~~----~~~~~ 168 (375)
..+||+|||||++|+++|+.|++.|.+|+|||+....+.. ...+.+.+..+....... ..+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 4589999999999999999999999999999998654311 111222222222111000 00000
Q ss_pred --ceEEeCC-CCCeeecCCce-ee----cHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEE
Q 017240 169 --TVVYIDE-DEPILIGRAYG-RV----SRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLA 239 (375)
Q Consensus 169 --~~~~~~~-~~~~~~~~~~~-~v----~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~v 239 (375)
...++.. ...... ...+ .+ ....+.+.|.+.+++.||+++ +++|+++..++++++.|++.+|.++.||.|
T Consensus 105 ~~~~~~~~~~G~~~~~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~V 183 (447)
T 2i0z_A 105 EDIITFFENLGVKLKE-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHV 183 (447)
T ss_dssp HHHHHHHHHTTCCEEE-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCE
T ss_pred HHHHHHHHhcCCceEE-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEE
Confidence 0000000 000000 0011 11 357888999999999999999 999999987666458888888877999999
Q ss_pred EEccCCCC
Q 017240 240 TVASGAAS 247 (375)
Q Consensus 240 I~A~G~~s 247 (375)
|+|+|++|
T Consensus 184 VlAtGg~s 191 (447)
T 2i0z_A 184 VIAVGGKS 191 (447)
T ss_dssp EECCCCSS
T ss_pred EECCCCCc
Confidence 99999998
No 45
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.50 E-value=2.2e-13 Score=137.80 Aligned_cols=145 Identities=19% Similarity=0.229 Sum_probs=91.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC-----CcCc---HHHHHhcCCchhhhhh-----------
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-----YGVW---EDEFRDLGLEGCIEHV----------- 165 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-----~g~~---~~~l~~~g~~~~~~~~----------- 165 (375)
...+||||||||++|+++|+.|++.|++|+||||....+.+ -+++ ....+.+++.+.....
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999998654321 1111 1112222221110000
Q ss_pred ------------------c-ccceEEeC-----CCC--CeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEE
Q 017240 166 ------------------W-RDTVVYID-----EDE--PILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITE 218 (375)
Q Consensus 166 ------------------~-~~~~~~~~-----~~~--~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~ 218 (375)
| ....+.+. ... +..+....+.+....+...|.+.+++.||+++ +++|+++..
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVV 278 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE
Confidence 0 00000000 000 00000111125578899999999999999999 999999988
Q ss_pred cC-CceEEEEec--CCe--EEecCEEEEccCCCCcc
Q 017240 219 ST-SGHRLVACE--HDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 219 ~~-~~~~~V~~~--~g~--~i~a~~vI~A~G~~s~~ 249 (375)
++ +.++.|++. +|+ ++.||.||+|||+++..
T Consensus 279 ~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 279 NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 76 544455543 664 68999999999999864
No 46
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.50 E-value=2.1e-13 Score=130.74 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=93.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC----CCcC--------------------cHHHHHhcCC--c
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN----NYGV--------------------WEDEFRDLGL--E 159 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~----~~g~--------------------~~~~l~~~g~--~ 159 (375)
..+||+|||||++|+++|++|+++|++|+|||+...... +.|. |.+..+..+. .
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 358999999999999999999999999999999753321 1111 1111111111 0
Q ss_pred h--hh------------h------hhcccceEEeCCC--------------CCeeecCCceeecHHHHHHHHHHHHHHCC
Q 017240 160 G--CI------------E------HVWRDTVVYIDED--------------EPILIGRAYGRVSRHLLHEELLRRCVESG 205 (375)
Q Consensus 160 ~--~~------------~------~~~~~~~~~~~~~--------------~~~~~~~~~~~v~~~~l~~~L~~~~~~~g 205 (375)
. .+ . ..+......++.. ....+.+..+.+++..+.+.|.+.+++.|
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G 163 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYG 163 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHCC
Confidence 0 00 0 0000000111100 00111222346889999999999999999
Q ss_pred ceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 206 VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 206 v~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
++++ +++|+++..++++...|++.+| +++||.||+|+|.++..
T Consensus 164 v~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~ 207 (382)
T 1y56_B 164 AKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANL 207 (382)
T ss_dssp CEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred CEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHH
Confidence 9999 9999999987763344888887 89999999999998744
No 47
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.49 E-value=4.1e-14 Score=134.83 Aligned_cols=168 Identities=13% Similarity=0.139 Sum_probs=98.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceE-EeCCCCCeeecCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVV-YIDEDEPILIGRA 184 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 184 (375)
.+||+|||||++|+++|+.|++.|+ +|+|||++. .+..|..|.... .+-.+......+.-... .........+...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKST-RTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTC-BCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccc-cccCcchhcccCCchhhhhcccccccccccc
Confidence 5899999999999999999999999 999999986 332111110000 00000000000000000 0000000000001
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccCceee--ec
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEWSYI--PV 261 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~~~~--p~ 261 (375)
...+++..+...+.+.+++.|++++ ++.|+++..+++ .+.|.+.++ ++.+|.||+|+|.++....+- +..+. ..
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~-~~~~~~~~~ 158 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDA-YYTIATTTE-TYHADYIFVATGDYNFPKKPF-KYGIHYSEI 158 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-SEEEEESSC-CEEEEEEEECCCSTTSBCCCS-SSCEEGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC-eEEEEeCCC-EEEeCEEEECCCCCCccCCCC-Cceechhhc
Confidence 1135667888888888888999999 899999988765 577888777 699999999999876432221 11111 11
Q ss_pred CCCCCccCCCEEEEccCC
Q 017240 262 GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa 279 (375)
........+++++||.+.
T Consensus 159 ~~~~~~~~~~vvVvG~G~ 176 (369)
T 3d1c_A 159 EDFDNFNKGQYVVIGGNE 176 (369)
T ss_dssp SCGGGSCSSEEEEECCSH
T ss_pred CChhhcCCCEEEEECCCc
Confidence 111122356899999774
No 48
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.49 E-value=9.1e-14 Score=136.51 Aligned_cols=175 Identities=14% Similarity=0.059 Sum_probs=104.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCCCCCCCCcCcHHHHHhcCCchh------------------hhhhc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNNYGVWEDEFRDLGLEGC------------------IEHVW 166 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~~~~~~~g~~~~~l~~~g~~~~------------------~~~~~ 166 (375)
.+||+||||||+|+++|..|++.|. +|+|||+....+..|.........+.++.. ....+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4899999999999999999999999 999999986544222110000000000000 00000
Q ss_pred ccceEEeC----CCCCeeec-CCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC---Ce---EE
Q 017240 167 RDTVVYID----EDEPILIG-RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---DM---IV 234 (375)
Q Consensus 167 ~~~~~~~~----~~~~~~~~-~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g~---~i 234 (375)
........ ........ ......++..+.++|.+.+++.+..++ +++|+++...++ .+.|++.+ |. ++
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~-~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDG-SWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETT-EEEEEEEESSTTCCEEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCC-eEEEEEeecCCCCeeEEE
Confidence 00000000 00000000 001135678899999999988888888 999999988766 67787765 65 79
Q ss_pred ecCEEEEccCCCCcccc-cccCc---------eeee---cCCCCCccCCCEEEEccCCCCC
Q 017240 235 PCRLATVASGAASGKLL-EYEEW---------SYIP---VGGSLPNTEQRNLAFGAAASMV 282 (375)
Q Consensus 235 ~a~~vI~A~G~~s~~~~-~~~~~---------~~~p---~~~~~~~~~~~v~liGdaa~~~ 282 (375)
.+|.||+|+|.++.... .+.+. .++. ......+.+++|++||.+.+++
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~ 225 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSAN 225 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHH
T ss_pred EeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHH
Confidence 99999999999765432 22211 0111 1111234578999999876443
No 49
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.49 E-value=3e-13 Score=136.80 Aligned_cols=141 Identities=14% Similarity=0.211 Sum_probs=94.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC-CC---CC--C-cC----cHHHHHhcCCchhhhhhcccceE---E
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP-FT---NN--Y-GV----WEDEFRDLGLEGCIEHVWRDTVV---Y 172 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~-~~---~~--~-g~----~~~~l~~~g~~~~~~~~~~~~~~---~ 172 (375)
.|||+|||||+||+++|+.|++.|.+|+|||+... .+ ++ . |+ +.+.++.++-. .....+...+ .
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~--~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGL--MAKAIDQAGIQFRI 105 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCS--HHHHHHHHEEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccH--HHHHhhhcccchhh
Confidence 59999999999999999999999999999998742 22 11 1 11 11223333210 0011111111 1
Q ss_pred eCCCCCeeecCCceeecHHHHHHHHHHHHHH-CCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 173 IDEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+..........+...+++..+...|.+.+++ .|++++++.|+++..+++.++.|.+.+|.++.||.||+|||.++..
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCC
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccC
Confidence 1111100011112357888999999999988 6999998899999877665668888889889999999999998743
No 50
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.48 E-value=4.1e-13 Score=135.33 Aligned_cols=141 Identities=18% Similarity=0.228 Sum_probs=94.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC-CCC---CC--C-cC----cHHHHHhcCCchhhhhhcccceEE---
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL-PFT---NN--Y-GV----WEDEFRDLGLEGCIEHVWRDTVVY--- 172 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~-~~~---~~--~-g~----~~~~l~~~g~~~~~~~~~~~~~~~--- 172 (375)
.|||+|||||+||++||+.|++.|.+|+|||+.. ..+ ++ . |+ +.+.++.++-. .....+...+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~--~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGE--MGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCS--HHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhH--HHHHhhhcccceee
Confidence 4899999999999999999999999999999874 222 11 1 11 11223333211 00111111111
Q ss_pred eCCCCCeeecCCceeecHHHHHHHHHHHHHH-CCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 173 IDEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+..........+...+++..+...|.+.+++ .|++++++.|+++..+++.++.|.+.+|.++.|+.||+|||.++..
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 1111100011112357888999999999988 5999998899999887765667889899899999999999988654
No 51
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.48 E-value=1.2e-13 Score=129.28 Aligned_cols=148 Identities=16% Similarity=0.207 Sum_probs=100.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+|||||++|+++|+.|++.|++|+|||+....+. .|... +.....+. ...+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG---~~~~~-------------~~~~~~~~--------~~~~~ 62 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG---QLSAL-------------YPEKYIYD--------VAGFP 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH---HHHHH-------------CTTSEECC--------STTCS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc---eehhc-------------CCCceEec--------cCCCC
Confidence 48999999999999999999999999999999865432 22110 00000000 00111
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC--cccccccCc------e
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS--GKLLEYEEW------S 257 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s--~~~~~~~~~------~ 257 (375)
.+.+.++...+.+.+.+.|++++ +++|+++...+++.+.|++.+|+ +.+|.||+|+|..+ +...++.+. .
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~ 141 (332)
T 3lzw_A 63 KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKN 141 (332)
T ss_dssp SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTT
T ss_pred CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCce
Confidence 35678899999999999999999 99999998876556889998885 99999999999843 222122111 1
Q ss_pred ee-ecCCCCCccCCCEEEEccCC
Q 017240 258 YI-PVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~~-p~~~~~~~~~~~v~liGdaa 279 (375)
+. .........+++++++|.+.
T Consensus 142 ~~~~~~~~~~~~~~~v~vvG~g~ 164 (332)
T 3lzw_A 142 LHYFVDDLQKFAGRRVAILGGGD 164 (332)
T ss_dssp EESSCSCGGGGBTCEEEEECSSH
T ss_pred EEEecCCHHHcCCCEEEEECCCH
Confidence 11 11111123467899999764
No 52
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.48 E-value=2.3e-13 Score=140.41 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=58.1
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~ 251 (375)
.+.+++..+...|.+.+++.|++++ +++|+++..+++ .+.|++.+|.++.||.||+|+|.++..+.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD-CWLLNFAGDQQATHSVVVLANGHQISRFS 477 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECCGGGGGCST
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC-eEEEEECCCCEEECCEEEECCCcchhccc
Confidence 3578889999999999999999999 999999998877 57888888778999999999999987553
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.48 E-value=4.9e-13 Score=133.89 Aligned_cols=141 Identities=20% Similarity=0.285 Sum_probs=90.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC----CcCcHHHHHhcCCchh------hhhhcccceEEe--
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN----YGVWEDEFRDLGLEGC------IEHVWRDTVVYI-- 173 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~----~g~~~~~l~~~g~~~~------~~~~~~~~~~~~-- 173 (375)
..+||+||||||+|+++|+.|++.|++|+|||+....... .+.|... .+..... -...+.+.....
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~--~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKR--TLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHC--CCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccc--cccccccceeccCCcccccCCceEEEe
Confidence 4589999999999999999999999999999998543100 0001000 0000000 000000000000
Q ss_pred ---------------CCCCC--e--eecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeE
Q 017240 174 ---------------DEDEP--I--LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMI 233 (375)
Q Consensus 174 ---------------~~~~~--~--~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~ 233 (375)
....+ . ...+..+......+.+.|.+.+++.|++++ +++|+++..++++.+.|++.+|++
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 00000 0 000112234457788899999999999999 999999988776567789999989
Q ss_pred EecCEEEEccCCCCc
Q 017240 234 VPCRLATVASGAASG 248 (375)
Q Consensus 234 i~a~~vI~A~G~~s~ 248 (375)
+.||.||+|+|.++.
T Consensus 264 i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 264 IKSRHVVLAVGHSAR 278 (549)
T ss_dssp EECSCEEECCCTTCH
T ss_pred EECCEEEECCCCChh
Confidence 999999999999884
No 54
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.47 E-value=4.4e-13 Score=134.86 Aligned_cols=169 Identities=18% Similarity=0.108 Sum_probs=103.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+||+|||||++|+++|+.|++.|++|+|||+....+.. |... ...++.......... ..+............
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~---w~~~-~~pg~~~d~~~~~~~--~~f~~~~~~~~~~~~ 88 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV---WYWN-RYPGARCDIESIEYC--YSFSEEVLQEWNWTE 88 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH---HHHC-CCTTCBCSSCTTTSS--CCSCHHHHHHCCCCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc---cccc-CCCceeecccccccc--cccChhhhhccCccc
Confidence 4689999999999999999999999999999998765432 2100 000000000000000 000000000000001
Q ss_pred eeecHHHHHHHHHHHHHHCC--ceEE-EEEEEEEEEcCC-ceEEEEecCCeEEecCEEEEccCCCCcccc-ccc------
Q 017240 186 GRVSRHLLHEELLRRCVESG--VSYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASGKLL-EYE------ 254 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~g--v~i~-~~~v~~i~~~~~-~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~-~~~------ 254 (375)
...++.++.+++.+.+++.+ +.++ +++|+++..+++ +.+.|++.+|+++.||.||+|+|.++.... ++.
T Consensus 89 ~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~ 168 (542)
T 1w4x_A 89 RYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFA 168 (542)
T ss_dssp SSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCC
Confidence 13567788888888888766 6788 999999987653 368899998988999999999998764432 221
Q ss_pred CceeeecC---CCCCccCCCEEEEccCCC
Q 017240 255 EWSYIPVG---GSLPNTEQRNLAFGAAAS 280 (375)
Q Consensus 255 ~~~~~p~~---~~~~~~~~~v~liGdaa~ 280 (375)
+..++... ......+++|++||.+++
T Consensus 169 G~~~hs~~~~~~~~~~~gk~V~VIG~G~s 197 (542)
T 1w4x_A 169 GNLYHTGNWPHEPVDFSGQRVGVIGTGSS 197 (542)
T ss_dssp SEEEEGGGCCSSCCCCBTCEEEEECCSHH
T ss_pred CceEECCCCCCchhccCCCEEEEECCCcc
Confidence 11122211 123456789999998753
No 55
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.46 E-value=1.8e-13 Score=127.60 Aligned_cols=142 Identities=16% Similarity=0.123 Sum_probs=96.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+|||||++|+++|+.|++.|++|+|||++ .+..+ .. ....+ .-+.+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~---~~----------------~~~~~--------~~~~~~ 65 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL---TE----------------AGIVD--------DYLGLI 65 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG---GG----------------CCEEC--------CSTTST
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee---cc----------------ccccc--------ccCCCC
Confidence 589999999999999999999999999999987 22111 00 00000 000111
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccCc------ee--
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEW------SY-- 258 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~------~~-- 258 (375)
.+....+...+.+.+.+.|++++.++|+++..+++ .+.|++.+|.++.+|.||+|+|..+..+ ...+. .+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~lvlAtG~~~~~~-~i~g~~~~~~~~~~~ 143 (323)
T 3f8d_A 66 EIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGD-EFVVKTKRKGEFKADSVILGIGVKRRKL-GVPGEQEFAGRGISY 143 (323)
T ss_dssp TEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC---CEEEEESSSCEEEEEEEEECCCCEECCC-CCTTTTTTBTTTEES
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCC-EEEEEECCCCEEEcCEEEECcCCCCccC-CCCchhhhcCCceEE
Confidence 25677899999999999999988788999987765 6788888888999999999999874332 11111 01
Q ss_pred eecCCCCCccCCCEEEEccCC
Q 017240 259 IPVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa 279 (375)
..........+++++++|.+.
T Consensus 144 ~~~~~~~~~~~~~v~vvG~G~ 164 (323)
T 3f8d_A 144 CSVADAPLFKNRVVAVIGGGD 164 (323)
T ss_dssp CHHHHGGGGTTCEEEEECCSH
T ss_pred eccCCHhHcCCCEEEEECCCH
Confidence 000111123467899998764
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.46 E-value=2.4e-13 Score=129.75 Aligned_cols=64 Identities=17% Similarity=0.201 Sum_probs=55.7
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
.+.+++..+...|.+.+++.|++++ +++|+++..+++ .+.|++.+| ++.||.||+|+|.++..+
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~~~v~~~~g-~~~a~~vV~a~G~~s~~l 207 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-GVTIETADG-EYQAKKAIVCAGTWVKDL 207 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-SEEEEESSC-EEEEEEEEECCGGGGGGT
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-EEEEEECCC-eEEcCEEEEcCCccHHhh
Confidence 3578888999999999999999999 999999988766 577888887 599999999999988654
No 57
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.46 E-value=3.1e-13 Score=130.41 Aligned_cols=63 Identities=14% Similarity=0.157 Sum_probs=54.9
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+.+++..+.+.|.+.+++.|++++ +++|+++..++++.+.|++.+| ++.+|.||+|+|.++..
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~ 232 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSV 232 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHH
Confidence 467888999999999999999999 9999999887665677888888 79999999999998743
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.46 E-value=2.2e-13 Score=126.75 Aligned_cols=143 Identities=17% Similarity=0.241 Sum_probs=96.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
+||+||||||+|+++|+.|++.|+ +|+|||+....+ .+... . ...... +.+ .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg----~~~~~----~-----------~~~~~~-------~~~-~ 54 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGG----QITGS----S-----------EIENYP-------GVK-E 54 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTC----GGGGC----S-----------CBCCST-------TCC-S
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCc----ccccc----c-----------ccccCC-------CCc-c
Confidence 799999999999999999999999 999999863221 11000 0 000000 000 1
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccCc------eeee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEW------SYIP 260 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~------~~~p 260 (375)
.+++..+.+.+.+.+.+.|++++.++|+++..+++ .+.|++.+|.++.+|.||+|+|+++..+ +..+. .+..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~~~-~~~g~~~~~~~~~~~ 132 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDS-HFVILAEDGKTFEAKSVIIATGGSPKRT-GIKGESEYWGKGVST 132 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETT-EEEEEETTSCEEEEEEEEECCCEEECCC-CCBTHHHHBTTTEES
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCC-EEEEEEcCCCEEECCEEEECCCCCCCCC-CCCChhhccCCcEEE
Confidence 35678899999999988999988678888887766 6778788888899999999999765433 11111 0110
Q ss_pred --cCCCCCccCCCEEEEccCC
Q 017240 261 --VGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 261 --~~~~~~~~~~~v~liGdaa 279 (375)
........+++++++|.+.
T Consensus 133 ~~~~~~~~~~~~~v~VvG~G~ 153 (311)
T 2q0l_A 133 CATCDGFFYKNKEVAVLGGGD 153 (311)
T ss_dssp CHHHHGGGGTTSEEEEECCSH
T ss_pred eecCChhhcCCCEEEEECCCH
Confidence 0011123467899999774
No 59
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.46 E-value=1.8e-13 Score=128.29 Aligned_cols=145 Identities=15% Similarity=0.167 Sum_probs=95.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+||||||+|+++|+.|++.|++|+|||+.. .+..+-.. ..+. ... +.+ .
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~------~~~~------------~~~-------~~~-~ 60 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWS------EEVE------------NFP-------GFP-E 60 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGC------SCBC------------CST-------TCS-S
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccc------cccc------------cCC-------CCC-C
Confidence 5899999999999999999999999999999983 22111000 0000 000 000 0
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEc--CCceEEEEecCCeEEecCEEEEccCCCCcccccccCc------ee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITES--TSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEW------SY 258 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~--~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~------~~ 258 (375)
.+++..+.+.+.+.+++.|++++.++|++++.+ ++..+.|.+.+|.++.+|.||+|+|..+..+ +.... .+
T Consensus 61 ~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~-~i~g~~~~~~~~~ 139 (325)
T 2q7v_A 61 PIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL-GIPGEDNFWGKGV 139 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC-CCTTTTTTBTTTE
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC-CCCChhhccCceE
Confidence 245678889999999999999886689998876 4322677777788899999999999764332 11111 01
Q ss_pred e--ecCCCCCccCCCEEEEccCC
Q 017240 259 I--PVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 259 ~--p~~~~~~~~~~~v~liGdaa 279 (375)
. .........+++++++|.+.
T Consensus 140 ~~~~~~~~~~~~~~~v~VvG~G~ 162 (325)
T 2q7v_A 140 STCATCDGFFYKGKKVVVIGGGD 162 (325)
T ss_dssp ESCHHHHGGGGTTCEEEEECCSH
T ss_pred EEeccCCHHHcCCCEEEEECCCH
Confidence 0 00011123467899999775
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.45 E-value=7.9e-13 Score=128.01 Aligned_cols=135 Identities=22% Similarity=0.236 Sum_probs=86.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC-------------CcCcHH------------HHHhcCCchh
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-------------YGVWED------------EFRDLGLEGC 161 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-------------~g~~~~------------~l~~~g~~~~ 161 (375)
.+||+|||||++|+++|+.|++.|.+|+|||+....+.. .+.... .+..+...+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999998644210 011100 0000000000
Q ss_pred hhhhcccc-eEEeCCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEc----CCceEEEEecCCeEEe
Q 017240 162 IEHVWRDT-VVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITES----TSGHRLVACEHDMIVP 235 (375)
Q Consensus 162 ~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~----~~~~~~V~~~~g~~i~ 235 (375)
+....... ...... . +..+..-+...+.+.|.+.+++.|++++ ++.|+++..+ ++ .+.|++.++ +++
T Consensus 84 ~~~~~~~Gi~~~~~~-~----g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~-~~~v~~~~g-~i~ 156 (401)
T 2gqf_A 84 ISLVAEQGITYHEKE-L----GQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKV-RFVLQVNST-QWQ 156 (401)
T ss_dssp HHHHHHTTCCEEECS-T----TEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSC-CEEEEETTE-EEE
T ss_pred HHHHHhCCCceEECc-C----CEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCC-eEEEEECCC-EEE
Confidence 00000000 000000 0 0000000567888999999999999999 9999999876 44 578888777 799
Q ss_pred cCEEEEccCCCCc
Q 017240 236 CRLATVASGAASG 248 (375)
Q Consensus 236 a~~vI~A~G~~s~ 248 (375)
||.||+|+|+++.
T Consensus 157 ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 157 CKNLIVATGGLSM 169 (401)
T ss_dssp ESEEEECCCCSSC
T ss_pred CCEEEECCCCccC
Confidence 9999999999984
No 61
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.45 E-value=1.6e-13 Score=129.00 Aligned_cols=180 Identities=13% Similarity=0.135 Sum_probs=110.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC-CCc--C----------cHHHHHhcCCchhhhhhcccceE
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYG--V----------WEDEFRDLGLEGCIEHVWRDTVV 171 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~-~~g--~----------~~~~l~~~g~~~~~~~~~~~~~~ 171 (375)
.+||+|||||++|+++|+.|+++ |++|+|||+....+. .|. . ....++.+|++..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~---------- 148 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE---------- 148 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc----------
Confidence 58999999999999999999997 999999998864431 110 0 1122333332110
Q ss_pred EeCCCCCeeecCCce-eecHHHHHHHHHHHHHH-CCceEE-EEEEEEEEEcCC-------------------ceEEEEec
Q 017240 172 YIDEDEPILIGRAYG-RVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTS-------------------GHRLVACE 229 (375)
Q Consensus 172 ~~~~~~~~~~~~~~~-~v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~-------------------~~~~V~~~ 229 (375)
. .+ .+. ..+...+.+.|.+.+.+ .|++++ ++.|+++..+++ .+..|.+.
T Consensus 149 ---~-----~G-~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~ 219 (344)
T 3jsk_A 149 ---D-----EG-DYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTN 219 (344)
T ss_dssp ---E-----CS-SEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEE
T ss_pred ---c-----cC-CeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEee
Confidence 0 00 111 12356778889988888 599999 999999876652 23344331
Q ss_pred --------------CCeEEecCEEEEccCCCCccccc----ccCcee-------eecCC---------CCCccCCCEEEE
Q 017240 230 --------------HDMIVPCRLATVASGAASGKLLE----YEEWSY-------IPVGG---------SLPNTEQRNLAF 275 (375)
Q Consensus 230 --------------~g~~i~a~~vI~A~G~~s~~~~~----~~~~~~-------~p~~~---------~~~~~~~~v~li 275 (375)
+..+++|++||+|||..++.... +....+ -|+.. ......+++++.
T Consensus 220 ~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~ 299 (344)
T 3jsk_A 220 WTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVG 299 (344)
T ss_dssp EHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEEC
T ss_pred eeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEe
Confidence 23579999999999988764211 100111 11000 001123477888
Q ss_pred ccCCCCC------CCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 276 GAAASMV------HPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 276 Gdaa~~~------~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
|-++..+ -|.-| ..+.++..+|+.|.+.|+
T Consensus 300 gm~~~~~~g~~rmgp~fg----~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 300 GMELSEIDGANRMGPTFG----AMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp GGGHHHHHTCEECCSCCH----HHHHHHHHHHHHHHHHHH
T ss_pred chhhHhhcCCCCCCcccc----eeeecCHHHHHHHHHHHH
Confidence 8655443 45544 446778888888887775
No 62
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.45 E-value=1.2e-12 Score=120.83 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=115.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCCCCCCCCc----C---------cHHHHHhcCCchhhhhhcccceEE
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLPFTNNYG----V---------WEDEFRDLGLEGCIEHVWRDTVVY 172 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~~g----~---------~~~~l~~~g~~~~~~~~~~~~~~~ 172 (375)
.+||+|||||++|+++|+.|++. |.+|+|||+....+.... . ..+.++++|++...
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~---------- 108 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDE---------- 108 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEE----------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCccc----------
Confidence 48999999999999999999997 999999999865432110 0 11223333321100
Q ss_pred eCCCCCeeecCCce-eecHHHHHHHHHHHHHH-CCceEE-EEEEEEEEEcCCceEEEEec---------CC-----eEEe
Q 017240 173 IDEDEPILIGRAYG-RVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACE---------HD-----MIVP 235 (375)
Q Consensus 173 ~~~~~~~~~~~~~~-~v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~V~~~---------~g-----~~i~ 235 (375)
...+. ..+...+...|.+.+.+ .|++++ +++|+++..+++....|.+. +| .++.
T Consensus 109 ---------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ 179 (284)
T 1rp0_A 109 ---------QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVME 179 (284)
T ss_dssp ---------CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEE
T ss_pred ---------CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEE
Confidence 00111 12567788888888876 699999 99999998776633355442 22 5799
Q ss_pred cCEEEEccCCCCccccc---cc-----CceeeecCCC------------CCccCCCEEEEccCCCC------CCCCChHH
Q 017240 236 CRLATVASGAASGKLLE---YE-----EWSYIPVGGS------------LPNTEQRNLAFGAAASM------VHPATGYS 289 (375)
Q Consensus 236 a~~vI~A~G~~s~~~~~---~~-----~~~~~p~~~~------------~~~~~~~v~liGdaa~~------~~p~~G~G 289 (375)
||.||+|+|..|..... .. ...+.|..+. .....+++++.|+.+.. +-|.
T Consensus 180 ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~---- 255 (284)
T 1rp0_A 180 AKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPT---- 255 (284)
T ss_dssp EEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSC----
T ss_pred CCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChH----
Confidence 99999999987754310 00 0111111110 01123678999986533 2343
Q ss_pred HHHHHhhHHHHHHHHHHHHhcC
Q 017240 290 VVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 290 i~~al~~a~~~a~~i~~~l~~~ 311 (375)
+..++.++..+|+.+.+.|+..
T Consensus 256 ~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 256 FGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhHHHHHHHHHHHhhhh
Confidence 3456789999999999888654
No 63
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.45 E-value=4.6e-13 Score=134.59 Aligned_cols=169 Identities=19% Similarity=0.153 Sum_probs=104.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhh-hhhcccceEEeCCCCCeeecCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCI-EHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
..+||+|||||++|+++|+.|++.|++|+|||++...+.. |... .--+..... .+.+. ..+...........
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt---w~~~-~yPg~~~d~~~~~y~---~~f~~~~~~~~~~~ 80 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT---WYWN-RYPGCRLDTESYAYG---YFALKGIIPEWEWS 80 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH---HHHC-CCTTCBCSSCHHHHC---HHHHTTSSTTCCCS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc---cccC-CCCceeecCchhhcc---cccCcccccCCCcc
Confidence 3589999999999999999999999999999998765432 2100 000000000 00000 00000000000111
Q ss_pred ceeecHHHHHHHHHHHHHHCCc--eEE-EEEEEEEEEcCC-ceEEEEecCCeEEecCEEEEccCCCCcccc-ccc-----
Q 017240 185 YGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASGKLL-EYE----- 254 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~-~~~----- 254 (375)
....++.++..++.+.+++.|+ .++ +++|+++..+++ +.+.|++.+|+++.||.||+|+|..+.... ...
T Consensus 81 ~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f 160 (545)
T 3uox_A 81 ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSF 160 (545)
T ss_dssp BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCcccc
Confidence 1235678899999999988887 688 999999987543 378999999989999999999996553321 111
Q ss_pred -Cceeeec--CCC-------CCccCCCEEEEccCCCC
Q 017240 255 -EWSYIPV--GGS-------LPNTEQRNLAFGAAASM 281 (375)
Q Consensus 255 -~~~~~p~--~~~-------~~~~~~~v~liGdaa~~ 281 (375)
+..+... ... ....+++|++||.++.+
T Consensus 161 ~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tg 197 (545)
T 3uox_A 161 KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATG 197 (545)
T ss_dssp CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHH
T ss_pred CCCeEEcccccccccccccccccCCCeEEEECCCccH
Confidence 1112221 111 34567899999988633
No 64
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.45 E-value=1.1e-12 Score=128.03 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=58.2
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EE---EEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccccc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SS---KVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE 252 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~---~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~ 252 (375)
+.++...+...|.+.+++.|++++ ++ +|++|..++++...|++.+|.++.||.||+|+|+++..+.+
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~ 226 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD 226 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC
Confidence 678888999999999999999999 88 99999887764444999999889999999999999876543
No 65
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.44 E-value=2.7e-13 Score=140.22 Aligned_cols=66 Identities=11% Similarity=0.098 Sum_probs=57.0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCe-EEecCEEEEccCCCCcccc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM-IVPCRLATVASGAASGKLL 251 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~-~i~a~~vI~A~G~~s~~~~ 251 (375)
.+.+++..+...|.+.+++.|++++ +++|+++..+++ .+.|++.+|. ++.||.||+|+|+++..+.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~ 473 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-QWQLTFGQSQAAKHHATVILATGHRLPEWE 473 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-SEEEEEC-CCCCEEESEEEECCGGGTTCST
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-eEEEEeCCCcEEEECCEEEECCCcchhccc
Confidence 3578889999999999999999999 999999998877 5788888886 8999999999999987553
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.44 E-value=1e-12 Score=132.97 Aligned_cols=144 Identities=17% Similarity=0.221 Sum_probs=90.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC-----CcC---cHHHHHhcCCchhhhhh-----------
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-----YGV---WEDEFRDLGLEGCIEHV----------- 165 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-----~g~---~~~~l~~~g~~~~~~~~----------- 165 (375)
...+||||||||++|+++|+.|++.|++|+||||....+.+ -++ .......+++.+.....
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999999999998754321 111 11122223322111000
Q ss_pred ------------------c-ccceEEeC-----CCC--CeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEE
Q 017240 166 ------------------W-RDTVVYID-----EDE--PILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITE 218 (375)
Q Consensus 166 ------------------~-~~~~~~~~-----~~~--~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~ 218 (375)
| ....+.++ ... +..+....+......+...|.+.+++.||+++ +++|+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLK 283 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEE
Confidence 0 00000000 000 00000001124567899999999999999999 999999988
Q ss_pred cC-CceEEEEec--CCe--EEecCEEEEccCCCCc
Q 017240 219 ST-SGHRLVACE--HDM--IVPCRLATVASGAASG 248 (375)
Q Consensus 219 ~~-~~~~~V~~~--~g~--~i~a~~vI~A~G~~s~ 248 (375)
++ +.++.|.+. +|+ ++.||.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 76 444445544 564 6899999999999875
No 67
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.44 E-value=8.6e-13 Score=130.18 Aligned_cols=175 Identities=14% Similarity=0.174 Sum_probs=103.6
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCc---EEEECCCCCCCCCCcCcH-HHHHhcCCchhhhhhcccceEEeCCC----
Q 017240 108 LDLVVIGCGPAGLALAAESAK---LGLN---VGLIGPDLPFTNNYGVWE-DEFRDLGLEGCIEHVWRDTVVYIDED---- 176 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~---~G~~---V~liE~~~~~~~~~g~~~-~~l~~~g~~~~~~~~~~~~~~~~~~~---- 176 (375)
+||+||||||+|+++|..|++ .|++ |+|||+....+..|.... ..+...+++.. ...+..........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~-~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVH-SSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCC-CCCCTTCBCSSCGGGTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCc-CccccchhhcCChhhccc
Confidence 699999999999999999999 9999 999999865543221100 00001111100 00000000000000
Q ss_pred CCeeec-----CCceeecHHHHHHHHHHHHHHCCce--EE-EEEEEEEEEcCC-ceEEEEecC---C--eEEecCEEEEc
Q 017240 177 EPILIG-----RAYGRVSRHLLHEELLRRCVESGVS--YL-SSKVESITESTS-GHRLVACEH---D--MIVPCRLATVA 242 (375)
Q Consensus 177 ~~~~~~-----~~~~~v~~~~l~~~L~~~~~~~gv~--i~-~~~v~~i~~~~~-~~~~V~~~~---g--~~i~a~~vI~A 242 (375)
....+. .....+++..+.++|.+.+++.|++ ++ +++|+.+...++ +.+.|++.+ | .++.+|.||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 000000 0012467788999999999988998 88 999999987654 257777654 4 57899999999
Q ss_pred cCCCCcccc-ccc---Cc--eeee---cCCCCCccCCCEEEEccCCCCCC
Q 017240 243 SGAASGKLL-EYE---EW--SYIP---VGGSLPNTEQRNLAFGAAASMVH 283 (375)
Q Consensus 243 ~G~~s~~~~-~~~---~~--~~~p---~~~~~~~~~~~v~liGdaa~~~~ 283 (375)
||.++.... .+. .+ ..+. ........+++|++||.+.++++
T Consensus 162 tG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~e 211 (464)
T 2xve_A 162 TGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAED 211 (464)
T ss_dssp CCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHH
T ss_pred CCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHH
Confidence 997654432 121 11 1111 11112345789999999875443
No 68
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.44 E-value=5.1e-13 Score=127.61 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=56.2
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
+.+++..+...|.+.+++.|++++ +++|+++..+++ .+.|++.+| ++.||.||+|+|.++..+
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~~~V~t~~g-~i~a~~VV~A~G~~s~~l 212 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-AWEVRCDAG-SYRAAVLVNAAGAWCDAI 212 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-EEEEECSSE-EEEESEEEECCGGGHHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-eEEEEeCCC-EEEcCEEEECCChhHHHH
Confidence 568889999999999999999999 999999998877 588888888 899999999999987543
No 69
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.43 E-value=7.7e-13 Score=126.87 Aligned_cols=142 Identities=20% Similarity=0.239 Sum_probs=93.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC---CC----------CcC--------------cHHHHHhcCCc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NN----------YGV--------------WEDEFRDLGLE 159 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~---~~----------~g~--------------~~~~l~~~g~~ 159 (375)
.+||+|||||++|+++|++|+++|++|+|||+..... .. ++. |.+..+..+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 4899999999999999999999999999999875432 11 111 11111122211
Q ss_pred hhh----------------hhh------cccceEEeCCCC--------------CeeecCCceeecHHHHHHHHHHHHHH
Q 017240 160 GCI----------------EHV------WRDTVVYIDEDE--------------PILIGRAYGRVSRHLLHEELLRRCVE 203 (375)
Q Consensus 160 ~~~----------------~~~------~~~~~~~~~~~~--------------~~~~~~~~~~v~~~~l~~~L~~~~~~ 203 (375)
... ... +......++... ...+.+..+.+++..+...|.+.+++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 000 000 000000000000 00111223567888999999999999
Q ss_pred CCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 204 SGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 204 ~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
.|++++ +++|+++..+++ .+.|++.+| ++.||.||+|+|.++..+
T Consensus 163 ~Gv~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~a~~vV~A~G~~~~~l 208 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDISPD-SVKIETANG-SYTADKLIVSMGAWNSKL 208 (389)
T ss_dssp TTCEEECSCCEEEEEECSS-CEEEEETTE-EEEEEEEEECCGGGHHHH
T ss_pred CCCEEEcCcEEEEEEecCC-eEEEEeCCC-EEEeCEEEEecCccHHHH
Confidence 999999 999999998766 577888776 799999999999987543
No 70
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.43 E-value=3.7e-13 Score=129.76 Aligned_cols=62 Identities=11% Similarity=0.145 Sum_probs=53.4
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+.+++..+...|.+.+++.|++++ +++|+++..+++ .+.|++.++ +++||.||+|+|+++..
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v~v~t~~g-~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-GVSVTTDRG-TYRAGKVVLACGPYTND 210 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EEEEEESSC-EEEEEEEEECCGGGHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eEEEEECCC-EEEcCEEEEcCCcChHH
Confidence 467888899999999999999999 999999988766 577877776 79999999999998654
No 71
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.43 E-value=2.6e-13 Score=127.34 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=84.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
...+||+|||||++|+++|+.|++.|++|+|||+........ |.|... .....+. +.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~---------------~~~~~~~-------~~ 77 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT---------------TEIENFP-------GF 77 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS---------------SEECCST-------TC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc---------------hhhcccC-------CC
Confidence 346899999999999999999999999999999964211111 111000 0000000 00
Q ss_pred CceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe---cCCeEEecCEEEEccCCCCc
Q 017240 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 184 ~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~---~~g~~i~a~~vI~A~G~~s~ 248 (375)
+ ..+.+..+...+.+.+.+.|++++ ++ |+++..+++ .+.+.+ .++.++.+|.||+|+|..+.
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~-~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 78 P-DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSK-PFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp T-TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS-SEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred c-ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC-EEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 0 135678899999999999999999 77 999987766 577776 36678999999999997543
No 72
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.42 E-value=3.2e-13 Score=129.33 Aligned_cols=62 Identities=16% Similarity=0.137 Sum_probs=54.2
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+.+++..+.+.|.+.+++.|++++ +++|+++..+++ .+.|++.+| ++.||.||+|+|.++..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~a~~vV~A~G~~s~~ 221 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE-ALFIKTPSG-DVWANHVVVASGVWSGM 221 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS-SEEEEETTE-EEEEEEEEECCGGGTHH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC-EEEEEcCCc-eEEcCEEEECCChhHHH
Confidence 467888999999999999999999 999999987766 457888877 89999999999998763
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.42 E-value=1.9e-13 Score=128.47 Aligned_cols=117 Identities=18% Similarity=0.177 Sum_probs=82.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+||+||||||+|+++|+.|++.|++|+|||+........ |.+.. .... .. .+ ..+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~----------------~~~~--~~-~~---~~~- 64 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT----------------TTDV--EN-FP---GFP- 64 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG----------------CSEE--CC-ST---TCT-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee----------------cccc--cc-CC---CCc-
Confidence 5899999999999999999999999999999821111111 11000 0000 00 00 000
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
..+++..+...+.+.+.+.|++++ ++ |++++.+++ .+.|++ +|.++.+|.||+|+|.++..
T Consensus 65 ~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 65 EGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSK-PFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSS-SEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-EEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 125677889999999999999999 65 888887655 577777 77789999999999987543
No 74
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.41 E-value=5.5e-13 Score=123.94 Aligned_cols=143 Identities=20% Similarity=0.301 Sum_probs=94.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
|||+||||||+|+++|+.|++.|++|+|||+.. + |.|.. ..++ .. . .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--g---G~~~~---~~~~---------------~~----~--~~~~~ 52 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--G---GQILD---TVDI---------------EN----Y--ISVPK 52 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--T---GGGGG---CCEE---------------CC----B--TTBSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--C---ceecc---cccc---------------cc----c--cCcCC
Confidence 799999999999999999999999999998642 1 11110 0000 00 0 00012
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcC--CceEEEEecCCeEEecCEEEEccCCCCcccc--cccCc---eee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASGAASGKLL--EYEEW---SYI 259 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~--~~~~~---~~~ 259 (375)
.++..+.+.+.+.+++.|++++ +++|+.+..+. ++.+.|++.+|.++.+|.||+|+|.++..+. ...+. .+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~ 132 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVT 132 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEE
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeE
Confidence 4567788889898888999999 88999997642 2257888888888999999999997653321 11110 011
Q ss_pred ecC--CCCCccCCCEEEEccCC
Q 017240 260 PVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 260 p~~--~~~~~~~~~v~liGdaa 279 (375)
... ......+++++++|.+.
T Consensus 133 ~~~~~~~~~~~~~~v~VvG~G~ 154 (310)
T 1fl2_A 133 YCPHCDGPLFKGKRVAVIGGGN 154 (310)
T ss_dssp SCHHHHGGGGBTCEEEEECCSH
T ss_pred EeccCcHhhcCCCEEEEECCCH
Confidence 000 01123467899999774
No 75
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.40 E-value=2.4e-12 Score=130.22 Aligned_cols=141 Identities=19% Similarity=0.242 Sum_probs=91.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC-CCC---CC--cC-----cHHHHHhcCCchhhhhhcccceEE--
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP-FTN---NY--GV-----WEDEFRDLGLEGCIEHVWRDTVVY-- 172 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~-~~~---~~--g~-----~~~~l~~~g~~~~~~~~~~~~~~~-- 172 (375)
..|||+|||||+||+++|+.|++.|.+|+|||+... .+. +. |. ..+.+..++- ..........+.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g--~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGG--EMGKAIDATGIQFR 97 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTC--SHHHHHHHHEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhccc--HHHHHHHhcCCchh
Confidence 459999999999999999999999999999998741 221 11 11 1112222211 001111111111
Q ss_pred -eCCCCCeeecCCceeecHHHHHHHHHHHHHH-CCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 173 -IDEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 173 -~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
+..........+...+++..+...+.+.+++ .|++++++.|+++..+++.+..|.+.+|.++.||.||+|||.++.
T Consensus 98 ~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 98 MLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 1111000001112367888999999999988 499999778999887766445588888889999999999998754
No 76
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.40 E-value=6.8e-13 Score=124.01 Aligned_cols=112 Identities=15% Similarity=0.183 Sum_probs=80.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+||||||+|+++|+.|++.|++|+|||+....+ .+..+ ..+. .. +.+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~------~~~~------------~~---------~~~~ 67 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGG-LTAEA------PLVE------------NY---------LGFK 67 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTG-GGGGC------SCBC------------CB---------TTBS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc-ccccc------chhh------------hc---------CCCc
Confidence 5899999999999999999999999999999853221 11000 0000 00 0001
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
.+++..+...+.+.+.+.|++++.++|++++.+++ .+.|.+ ++.++.+|.||+|+|+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREGVEVRSIKKTQG-GFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETT-EEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCC-EEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 24566788888888888999988668888887665 566777 4558999999999997643
No 77
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.40 E-value=8.6e-13 Score=123.31 Aligned_cols=181 Identities=14% Similarity=0.096 Sum_probs=110.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC-CCc---C---------cHHHHHhcCCchhhhhhcccceE
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYG---V---------WEDEFRDLGLEGCIEHVWRDTVV 171 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~-~~g---~---------~~~~l~~~g~~~~~~~~~~~~~~ 171 (375)
.+||+||||||+|+++|+.|++. |++|+|||+....+. .+. . ....++.+++...
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~---------- 134 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE---------- 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc----------
Confidence 58999999999999999999999 999999999765432 110 0 1122223322110
Q ss_pred EeCCCCCeeecCCceeecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcC----C--ceEEEEec--------------
Q 017240 172 YIDEDEPILIGRAYGRVSRHLLHEELLRRCVES-GVSYL-SSKVESITEST----S--GHRLVACE-------------- 229 (375)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~----~--~~~~V~~~-------------- 229 (375)
.. +..+...+...+...|.+.+.+. |++++ ++.|+++..++ + .+..|.+.
T Consensus 135 ---~~-----g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~ 206 (326)
T 2gjc_A 135 ---DE-----GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCM 206 (326)
T ss_dssp ---EC-----SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCC
T ss_pred ---cC-----CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceecc
Confidence 00 11111224567888999988884 99999 99999998763 2 34455442
Q ss_pred CCeEEec---------------CEEEEccCCCCcccccc-------cCc----eeeec----------CCCCCc-cCCCE
Q 017240 230 HDMIVPC---------------RLATVASGAASGKLLEY-------EEW----SYIPV----------GGSLPN-TEQRN 272 (375)
Q Consensus 230 ~g~~i~a---------------~~vI~A~G~~s~~~~~~-------~~~----~~~p~----------~~~~~~-~~~~v 272 (375)
++.++.| ++||+|||..++...-. ... ...++ ...-++ .-+++
T Consensus 207 d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~ 286 (326)
T 2gjc_A 207 DPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNM 286 (326)
T ss_dssp CCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTE
T ss_pred CceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCE
Confidence 3357999 99999999766543111 000 00000 000111 45678
Q ss_pred EEEccCC------CCCCCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 273 LAFGAAA------SMVHPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 273 ~liGdaa------~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
++.|-++ .-+-|.- ...+.++..+|+.|.+.+.
T Consensus 287 ~~~g~~~~~~~~~~r~g~~f----g~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 287 YFAGMEVAELDGLNRMGPTF----GAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp EECTHHHHHHHTCCBCCSCC----HHHHHHHHHHHHHHHHHHH
T ss_pred EECChHHHHhcCCCCCChhh----hhhhhhhHHHHHHHHHHhh
Confidence 8888754 3344553 3456788888888877663
No 78
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.38 E-value=1.6e-12 Score=130.01 Aligned_cols=145 Identities=21% Similarity=0.316 Sum_probs=96.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+||+||||||+|+++|+.|++.|++|+|||+.. + |.|.. ..+++. ... .
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--G---G~~~~---~~~~~~-------------------~~~--~ 261 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--G---GQVLD---TVDIEN-------------------YIS--V 261 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--T---GGGTT---CSCBCC-------------------BTT--B
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--C---Ccccc---cccccc-------------------cCC--C
Confidence 45899999999999999999999999999998642 1 11100 000000 000 0
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcC--CceEEEEecCCeEEecCEEEEccCCCCcccc--cccC---ce
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASGAASGKLL--EYEE---WS 257 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~--~~~~---~~ 257 (375)
...++..+...+.+.+.+.|++++ +++|+.+..+. ++.+.|++.+|.++.+|.||+|||+++..+. ...+ ..
T Consensus 262 ~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~ 341 (521)
T 1hyu_A 262 PKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKG 341 (521)
T ss_dssp SSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCce
Confidence 124567888899999989999999 88999997542 2257888888888999999999997654321 1111 11
Q ss_pred e--eecCCCCCccCCCEEEEccCC
Q 017240 258 Y--IPVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~--~p~~~~~~~~~~~v~liGdaa 279 (375)
+ .+........++++++||.+.
T Consensus 342 v~~~~~~~~~~~~~k~V~ViGgG~ 365 (521)
T 1hyu_A 342 VTYCPHCDGPLFKGKRVAVIGGGN 365 (521)
T ss_dssp EECCTTCCGGGGBTSEEEEECCSH
T ss_pred EEEeecCchhhcCCCeEEEECCCH
Confidence 1 111111123467899999774
No 79
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.38 E-value=2.1e-12 Score=115.85 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
++||+|||||||||+||+.|+++|++|+||||....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 389999999999999999999999999999997654
No 80
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.38 E-value=1.1e-12 Score=123.65 Aligned_cols=143 Identities=19% Similarity=0.172 Sum_probs=93.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+||+||||||+|+++|+.|++.|++|+|||+....+ .+-.. . . .. ..+ ..+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~----------~--------~---~~-~~~---~~~- 65 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGG-ALMTT----------T--------D---VE-NYP---GFR- 65 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSC-GGGSC----------S--------C---BC-CST---TCT-
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC-ceecc----------c--------h---hh-hcC---CCC-
Confidence 35899999999999999999999999999999753221 11000 0 0 00 000 000
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEE-EecCCeEEecCEEEEccCCCCcccccccCc------e
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLV-ACEHDMIVPCRLATVASGAASGKLLEYEEW------S 257 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V-~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~------~ 257 (375)
..+++..+...+.+.+.+.|++++ ++ |++++. ++ .+.| .+.+|.++.+|.||+|+|..+..+ +..+. .
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~-~~~v~~~~~g~~~~~d~lviAtG~~~~~~-~i~g~~~~~~~~ 141 (335)
T 2a87_A 66 NGITGPELMDEMREQALRFGADLRMED-VESVSL-HG-PLKSVVTADGQTHRARAVILAMGAAARYL-QVPGEQELLGRG 141 (335)
T ss_dssp TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SS-SSEEEEETTSCEEEEEEEEECCCEEECCC-CCTHHHHTBTTT
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CC-cEEEEEeCCCCEEEeCEEEECCCCCccCC-CCCchHhccCCc
Confidence 125567888888888888999999 65 888876 33 4567 777888899999999999765332 11110 1
Q ss_pred eee--cCCCCCccCCCEEEEccCC
Q 017240 258 YIP--VGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~~p--~~~~~~~~~~~v~liGdaa 279 (375)
+.. ........++++++||.+.
T Consensus 142 ~~~~~~~~~~~~~~~~v~ViG~G~ 165 (335)
T 2a87_A 142 VSSCATCDGFFFRDQDIAVIGGGD 165 (335)
T ss_dssp EESCHHHHGGGGTTCEEEEECSSH
T ss_pred eEEeeccchhhcCCCEEEEECCCH
Confidence 110 0000113467899999764
No 81
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.37 E-value=9.9e-12 Score=122.22 Aligned_cols=150 Identities=18% Similarity=0.143 Sum_probs=112.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------------------------------ 205 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------------------------------ 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------------------------------
Confidence 57999999999999999999999999999987532110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc---c-----ccCcee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL---E-----YEEWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~---~-----~~~~~~ 258 (375)
. ...+.+.+.+.+++.|++++ +++|+++..+++ .+.|++.+|.++.+|.||+|+|..+.... + ..+...
T Consensus 206 ~-~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~ 283 (455)
T 2yqu_A 206 M-DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGR 283 (455)
T ss_dssp S-CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSC
T ss_pred c-CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCc
Confidence 0 12466777788888999999 999999987766 56777778888999999999997765421 1 112233
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
+.++..+....++++++||.+....- ...|..+|..+|..|..
T Consensus 284 i~vd~~~~t~~~~iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 284 IPVDEHLRTRVPHIYAIGDVVRGPML-----AHKASEEGIAAVEHMVR 326 (455)
T ss_dssp CCCCTTSBCSSTTEEECGGGSSSCCC-----HHHHHHHHHHHHHHHHH
T ss_pred EeECCCcccCCCCEEEEecCCCCccC-----HHHHHHhHHHHHHHHcC
Confidence 44444445456799999999865322 25788889998888864
No 82
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.37 E-value=9.9e-12 Score=122.10 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=114.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 205 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------------------------------ 205 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------------------------------
Confidence 47999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c-------cccCcee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L-------EYEEWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~-------~~~~~~~ 258 (375)
++ ..+.+.+.+.+++.|++++ ++.|+++..++++.+.|++.+|+++.+|.||+|+|..+... + ...+...
T Consensus 206 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~ 284 (450)
T 1ges_A 206 FD-PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGY 284 (450)
T ss_dssp SC-HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSC
T ss_pred hh-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCC
Confidence 11 2466777788888999999 99999998765434778888888899999999999765442 1 1123444
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
+.++..+....++|+++||.+..... ...|..+|..+|..|..
T Consensus 285 i~vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 285 IVVDKYQNTNIEGIYAVGDNTGAVEL-----TPVAVAAGRRLSERLFN 327 (450)
T ss_dssp BCCCTTSBCSSTTEEECSGGGTSCCC-----HHHHHHHHHHHHHHHHT
T ss_pred EeECCCCccCCCCEEEEeccCCCCcc-----HHHHHHHHHHHHHHHcC
Confidence 55555555556799999999764322 36788999998888753
No 83
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.37 E-value=1.2e-12 Score=122.24 Aligned_cols=112 Identities=18% Similarity=0.244 Sum_probs=80.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+||||||+|+++|+.|++.|++|+|||+....+ .+-.. . . .. ..+ ..+ .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~-----------------~-~---~~-~~~---~~~-~ 57 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGG-QLTTT-----------------T-E---VE-NWP---GDP-N 57 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTG-GGGGC-----------------S-B---CC-CST---TCC-S
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCc-eEecc-----------------h-h---hh-hCC---CCC-C
Confidence 4899999999999999999999999999999753221 11000 0 0 00 000 000 1
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
.+.+..+.+.+.+.+.+.|++++ ++ |+.++.+++ .+.| +.++.++.+|+||+|+|..+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~-~~~v-~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 58 DLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNR-PFRL-NGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSS-SEEE-EESSCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCC-EEEE-EeCCCEEEcCEEEECCCCCcC
Confidence 24567788888888889999999 64 888877655 5666 666778999999999997643
No 84
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.36 E-value=1.1e-11 Score=125.54 Aligned_cols=144 Identities=19% Similarity=0.170 Sum_probs=88.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC------------------cC---cHHHHHh---cC--C-
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY------------------GV---WEDEFRD---LG--L- 158 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~------------------g~---~~~~l~~---~g--~- 158 (375)
..+||+|||+|++|+++|+.|++.|++|+|||+....+... |+ +...+.. .+ .
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 45899999999999999999999999999999976543110 11 0111111 01 0
Q ss_pred -chhhhh----------hcccceEEeC-----CCC--CeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEc
Q 017240 159 -EGCIEH----------VWRDTVVYID-----EDE--PILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITES 219 (375)
Q Consensus 159 -~~~~~~----------~~~~~~~~~~-----~~~--~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~ 219 (375)
+..+.. ......+.++ ... +..+....+......+...|.+.+++.||+++ +++|+++..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 000000 0000000000 000 00000001123467899999999999999999 9999999876
Q ss_pred C-CceEEEEec--CCe--EEecCEEEEccCCCCcc
Q 017240 220 T-SGHRLVACE--HDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 220 ~-~~~~~V~~~--~g~--~i~a~~vI~A~G~~s~~ 249 (375)
+ +.++.|.+. +|+ ++.||.||+|+|.++..
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 6 545556554 564 68999999999998853
No 85
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.34 E-value=2.5e-11 Score=119.70 Aligned_cols=149 Identities=22% Similarity=0.160 Sum_probs=111.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||++|+.+|..|++.|.+|+|||+.+.....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-C--Ce--EEecCEEEEccCCCCcccc--------cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H--DM--IVPCRLATVASGAASGKLL--------EY 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~--g~--~i~a~~vI~A~G~~s~~~~--------~~ 253 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++. + |+ ++.+|.||+|+|..+.... ..
T Consensus 208 ~-~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 285 (464)
T 2eq6_A 208 G-DPETAALLRRALEKEGIRVRTKTKAVGYEKKKD-GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKV 285 (464)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCB
T ss_pred c-CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC-EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCcee
Confidence 0 12466777888888999999 999999987665 5667665 5 65 8999999999997654321 11
Q ss_pred cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 254 ~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+...+.++..+....++|+++||.+....- ...|..+|..+|+.|.
T Consensus 286 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l-----~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 286 DERGFIRVNARMETSVPGVYAIGDAARPPLL-----AHKAMREGLIAAENAA 332 (464)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGTCSSCC-----HHHHHHHHHHHHHHHT
T ss_pred cCCCCEEECCCcccCCCCEEEEeccCCCccc-----HHHHHHHHHHHHHHhc
Confidence 2334455555555566799999999864221 3578889998888875
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.34 E-value=1.5e-12 Score=128.09 Aligned_cols=140 Identities=16% Similarity=0.097 Sum_probs=85.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCC-----CcEEEECCCCCCCCCCcCcHHHHHhcCCc-----hhhhhhcccceE----
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLG-----LNVGLIGPDLPFTNNYGVWEDEFRDLGLE-----GCIEHVWRDTVV---- 171 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G-----~~V~liE~~~~~~~~~g~~~~~l~~~g~~-----~~~~~~~~~~~~---- 171 (375)
..+||+||||||+|+++|+.|++.| .+|+|||+....+-..+.+. ....+. +...........
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~---~~~~~~~~~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLV---SQSELQISFLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCC---SSCBCSSCTTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCC---CCCcCCcchhhccccccCCCCCCChhH
Confidence 4589999999999999999999999 99999999875542111110 000000 000000000000
Q ss_pred E-eCCCCCee-ecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcC--Cce--EEEEecCCe----EEecCEEE
Q 017240 172 Y-IDEDEPIL-IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGH--RLVACEHDM----IVPCRLAT 240 (375)
Q Consensus 172 ~-~~~~~~~~-~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~--~~V~~~~g~----~i~a~~vI 240 (375)
+ ........ .........+..+.+++...+++.+++++ +++|++++.++ ++. +.|++.+|. ++.+|.||
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lV 185 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALV 185 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEE
T ss_pred hhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEE
Confidence 0 00000000 00001124577888999888888899999 99999998762 223 367776664 89999999
Q ss_pred EccCCCCc
Q 017240 241 VASGAASG 248 (375)
Q Consensus 241 ~A~G~~s~ 248 (375)
+|||+.+.
T Consensus 186 lAtG~~p~ 193 (463)
T 3s5w_A 186 VSPGGTPR 193 (463)
T ss_dssp ECCCCEEC
T ss_pred ECCCCCCC
Confidence 99997443
No 87
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.34 E-value=1.1e-12 Score=127.17 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=86.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC----CCc--Cc-HH---------------HHHh-cCCch
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN----NYG--VW-ED---------------EFRD-LGLEG 160 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~----~~g--~~-~~---------------~l~~-~g~~~ 160 (375)
..+||+|||||++|+++|+.|+++ |++|+|||+...... +.| +| .. .+.. .+...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999 999999998753321 112 21 10 0000 00000
Q ss_pred hhhhhcccceEE----------e------------------CCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EE
Q 017240 161 CIEHVWRDTVVY----------I------------------DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SS 211 (375)
Q Consensus 161 ~~~~~~~~~~~~----------~------------------~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~ 211 (375)
. .......... + .......+....+.+++..+...|.+.+++.|++++ ++
T Consensus 115 ~-~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~ 193 (405)
T 3c4n_A 115 T-LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNT 193 (405)
T ss_dssp C-CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSC
T ss_pred C-CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCC
Confidence 0 0000000000 0 000001112233578889999999999999999999 99
Q ss_pred EEE---------EEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 212 KVE---------SITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 212 ~v~---------~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+|+ ++..+++ .+.|++.+| ++.||.||+|+|.++..
T Consensus 194 ~v~~~~g~~~~~~i~~~~~-~v~v~~~~g-~i~a~~VV~A~G~~s~~ 238 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTNT-HQIVVHETR-QIRAGVIIVAAGAAGPA 238 (405)
T ss_dssp EEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGHHH
T ss_pred EEEeccccccccceEeeCC-eEEEEECCc-EEECCEEEECCCccHHH
Confidence 999 8876555 457777776 89999999999998843
No 88
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.32 E-value=2.8e-13 Score=133.31 Aligned_cols=150 Identities=18% Similarity=0.178 Sum_probs=94.3
Q ss_pred CccccceeeccCCCCccccccCc-cchhhcCCcccccccccCCcchhcccccccCCCCCCCCCCcccEEEECCCHHHHHH
Q 017240 44 SYKVTARATSNNAGSESCVAVKE-EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLAL 122 (375)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~a 122 (375)
-|+|+++..|+. .|++... ++++..+..+.+......... . ....+ +.....+||+||||||+|+++
T Consensus 70 grvCp~~~~Ce~----~C~~~~~~~~~v~I~~le~~~~~~~~~~~-----~-~~~~~--~~~~~~~~V~IIGgGpAGl~a 137 (456)
T 2vdc_G 70 GRICPQDRLCEG----NCVIEQSTHGAVTIGSVEKYINDTAWDQG-----W-VKPRT--PSRELGLSVGVIGAGPAGLAA 137 (456)
T ss_dssp HHHCCGGGSGGG----GCGGGGSSSCSCCHHHHHHHHHHHHHHHT-----C-CCCCC--SCSSCCCCEEEECCSHHHHHH
T ss_pred cccCCCCcchHH----hcccCCCCCCCccHHHHHHHHHHHHHHcC-----C-CCCCC--CcCCCCCEEEEECCCHHHHHH
Confidence 389999999998 9998876 777766555543221000000 0 00000 111345899999999999999
Q ss_pred HHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCceeecHHHHHHHHHHHHH
Q 017240 123 AAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCV 202 (375)
Q Consensus 123 A~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~ 202 (375)
|+.|++.|++|+|||+....+. .+ .++++. ..++ ..+...+.+.++
T Consensus 138 A~~L~~~G~~V~v~e~~~~~GG---~l-----~~gip~-------------------------~~~~-~~~~~~~~~~l~ 183 (456)
T 2vdc_G 138 AEELRAKGYEVHVYDRYDRMGG---LL-----VYGIPG-------------------------FKLE-KSVVERRVKLLA 183 (456)
T ss_dssp HHHHHHHTCCEEEECSSSSCST---HH-----HHTSCT-------------------------TTSC-HHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEeccCCCCC---ee-----eecCCC-------------------------ccCC-HHHHHHHHHHHH
Confidence 9999999999999999754432 11 011110 0011 235556677778
Q ss_pred HCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 203 ESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 203 ~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
+.|++++ ++.|. . .|+++++ .+.+|.||+|+|++.+.
T Consensus 184 ~~gv~~~~~~~v~-----~----~v~~~~~-~~~~d~vvlAtG~~~~~ 221 (456)
T 2vdc_G 184 DAGVIYHPNFEVG-----R----DASLPEL-RRKHVAVLVATGVYKAR 221 (456)
T ss_dssp HTTCEEETTCCBT-----T----TBCHHHH-HSSCSEEEECCCCCEEC
T ss_pred HCCcEEEeCCEec-----c----EEEhhHh-HhhCCEEEEecCCCCCC
Confidence 8999998 77652 1 1333333 36799999999987443
No 89
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.32 E-value=8.4e-12 Score=124.28 Aligned_cols=64 Identities=17% Similarity=0.083 Sum_probs=54.5
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEccCCCCccc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGKL 250 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~~ 250 (375)
+.+++..+...|.+.+.+.|++++ +++|+++..+++ .+.|++. +|+ +++||.||+|+|.++..+
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l 213 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQF 213 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTTCCEEEEEESCEEECCGGGHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCC-EEEEEEEECCCCCEEEEECCEEEECCChhHHHH
Confidence 468899999999999999999999 999999988764 6777773 564 799999999999987543
No 90
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.32 E-value=4.3e-11 Score=118.32 Aligned_cols=150 Identities=14% Similarity=0.121 Sum_probs=111.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||+.|+.+|..|++.|.+|+|||+.+.....+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 222 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM----------------------------------------- 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc-----------------------------------------
Confidence 589999999999999999999999999999875332111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEE--cCCceEEEEec-----CCeEEecCEEEEccCCCCccc---cc----
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITE--STSGHRLVACE-----HDMIVPCRLATVASGAASGKL---LE---- 252 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~--~~~~~~~V~~~-----~g~~i~a~~vI~A~G~~s~~~---~~---- 252 (375)
...+.+.+.+.+++.||+++ ++.|+++.. +++ .+.|++. ++.++.+|.||+|+|..+... ..
T Consensus 223 --~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~ 299 (478)
T 1v59_A 223 --DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKN-VVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGL 299 (478)
T ss_dssp --CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTC
T ss_pred --CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCC-eEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCc
Confidence 12466777888888999999 999999987 444 5666665 456899999999999765432 11
Q ss_pred -ccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 253 -YEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 253 -~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
..+...+.++..+....++|+++||.+..... ...|..+|..+|+.|..
T Consensus 300 ~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 300 EVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPML-----AHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CBCTTSCBCCCTTSBCSSTTEEECGGGSSSCCC-----HHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCEeECcCCccCCCCEEEeeccCCCccc-----HHHHHHHHHHHHHHHcC
Confidence 12234455555555556799999999875322 36788999999888864
No 91
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.31 E-value=3.8e-11 Score=118.36 Aligned_cols=149 Identities=15% Similarity=0.170 Sum_probs=112.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 204 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------------------------------ 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCe-EEecCEEEEccCCCCccc-c--c-----ccCce
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM-IVPCRLATVASGAASGKL-L--E-----YEEWS 257 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~-~i~a~~vI~A~G~~s~~~-~--~-----~~~~~ 257 (375)
++ ..+.+.+.+.+++.|++++ ++.|+++..+++ .+.|++.+|+ ++.+|.||+|+|..+... + . ..+..
T Consensus 205 ~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G 282 (463)
T 2r9z_A 205 FD-PLLSATLAENMHAQGIETHLEFAVAALERDAQ-GTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNG 282 (463)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEESSCCEEEEEEETT-EEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTS
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCC
Confidence 11 2355677778888999999 999999987665 4778888898 899999999999765431 1 1 12234
Q ss_pred eeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 258 YIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 258 ~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+.++..+....++|+++||.+..... ...|..+|..+|..|.
T Consensus 283 ~i~vd~~~~t~~~~Iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 283 MVPTDAYQNTNVPGVYALGDITGRDQL-----TPVAIAAGRRLAERLF 325 (463)
T ss_dssp CCCCCTTSBCSSTTEEECGGGGTSCCC-----HHHHHHHHHHHHHHHH
T ss_pred CEeECCCCccCCCCEEEEeecCCCccc-----HHHHHHHHHHHHHHHc
Confidence 455555555556799999999764221 3678888888888775
No 92
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.31 E-value=3.7e-12 Score=124.44 Aligned_cols=103 Identities=21% Similarity=0.237 Sum_probs=69.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
+|||||||+||+++|..|++.+ ++|+|||+++...-.. .+..... |.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p-~l~~v~~--g~---------------------------- 52 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP-AFPHLAM--GW---------------------------- 52 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG-GHHHHHH--TC----------------------------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCc-cHHHHhc--CC----------------------------
Confidence 6999999999999999999876 7899999875321110 0001000 00
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
++..++...+.+.+++.||+++..+|++|+.+.. +|++++|+++.+|++|+|+|+.
T Consensus 53 -~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~---~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 53 -RKFEDISVPLAPLLPKFNIEFINEKAESIDPDAN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -SCGGGSEEESTTTGGGGTEEEECSCEEEEETTTT---EEEETTCCEEECSEEEECCCCE
T ss_pred -CCHHHhhhcHHHHHHHCCcEEEEeEEEEEECCCC---EEEECCCCEEECCEEEEeCCCC
Confidence 0000011111223445799999778999987765 7889999999999999999975
No 93
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.31 E-value=4.4e-12 Score=128.00 Aligned_cols=64 Identities=22% Similarity=0.178 Sum_probs=53.9
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC---C--eEEecCEEEEccCCCCcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAASGK 249 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g--~~i~a~~vI~A~G~~s~~ 249 (375)
+.++...+...|.+.+.+.|++++ +++|+++..++++.+.|++.+ | .++.||.||+|+|.++..
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~ 234 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT 234 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHH
Confidence 367889999999999999999999 899999998877556677653 3 479999999999998744
No 94
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.30 E-value=2.3e-11 Score=121.36 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHCCceEE-EEEEEEEEEc-CCceEEEEec-CC--eEEecC-EEEEccCCCCc
Q 017240 192 LLHEELLRRCVESGVSYL-SSKVESITES-TSGHRLVACE-HD--MIVPCR-LATVASGAASG 248 (375)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~-~~~~~~V~~~-~g--~~i~a~-~vI~A~G~~s~ 248 (375)
.+...|.+.+++.|++++ ++.|+++..+ ++.++.|.+. ++ .++.|+ .||+|+|+++.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 789999999999999999 9999999987 4445556554 33 368995 99999999984
No 95
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.30 E-value=4.7e-12 Score=117.55 Aligned_cols=112 Identities=18% Similarity=0.238 Sum_probs=78.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEE-ECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGL-IGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~l-iE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
..+||+|||||++|+++|+.|++.|++|+| ||+... +..+ ... ..+ ..++ ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~-gG~~---~~~---~~~------------~~~~--------~~ 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP-GGQI---TSS---SEI------------ENYP--------GV 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST-TGGG---GGC---SCB------------CCST--------TC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC-Ccee---eee---cee------------ccCC--------CC
Confidence 358999999999999999999999999999 999432 2111 000 000 0000 00
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcC--CceEEEEe-cCCeEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITEST--SGHRLVAC-EHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~--~~~~~V~~-~~g~~i~a~~vI~A~G~~s 247 (375)
...+....+...+.+.+.+.|++++...|+++ .++ + .+.|.. .++ ++.+|.||+|+|..+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~~~~~~-~~~v~~~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 56 AQVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-LKNSDG-SFTIKLEGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp CSCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-EECTTS-CEEEEETTSC-EEEEEEEEECCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-ecCCCC-cEEEEEecCC-EEEeCEEEEeeCCCC
Confidence 01356778999999999999999993388888 554 3 566422 334 899999999999743
No 96
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.30 E-value=5.1e-11 Score=117.13 Aligned_cols=149 Identities=20% Similarity=0.213 Sum_probs=109.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------------------------------ 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CCeEEecCEEEEccCCCCccc---cc-----ccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDMIVPCRLATVASGAASGKL---LE-----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~~i~a~~vI~A~G~~s~~~---~~-----~~~ 255 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++. ++.++.+|.||+|+|..+... .. ..+
T Consensus 209 ~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~ 286 (455)
T 1ebd_A 209 F-EKQMAAIIKKRLKKKGVEVVTNALAKGAEERED-GVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTN 286 (455)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCT
T ss_pred c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCC
Confidence 0 12466777788888999999 999999987665 4556554 456899999999999765432 11 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+....++|+++||.+.... . ...|..+|..+|..|.
T Consensus 287 ~G~i~vd~~~~t~~~~Iya~GD~~~~~~--~---~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 287 RGLIEVDQQCRTSVPNIFAIGDIVPGPA--L---AHKASYEGKVAAEAIA 331 (455)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGSSSCC--C---HHHHHHHHHHHHHHHT
T ss_pred CCCEeeCCCcccCCCCEEEEeccCCCcc--c---HHHHHHHHHHHHHHHc
Confidence 3345555555555679999999986422 1 2578889998888875
No 97
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=5.9e-11 Score=117.50 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=111.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 223 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------------------------------ 223 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------------------------------
Confidence 57999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEecCC-eEEecCEEEEccCCCCcccc--c-----ccCce
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHD-MIVPCRLATVASGAASGKLL--E-----YEEWS 257 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~~g-~~i~a~~vI~A~G~~s~~~~--~-----~~~~~ 257 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++ .+.|++.+| +++.+|.||+|+|..+...+ . ..+..
T Consensus 224 ~-d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G 302 (479)
T 2hqm_A 224 F-DECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHD 302 (479)
T ss_dssp S-CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTS
T ss_pred c-CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCC
Confidence 1 12466677788888999999 9999999876543 367888888 78999999999997654421 1 12233
Q ss_pred eeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 258 YIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 258 ~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+.++..+....++|+++||.+.... -...|..+|..+|+.|.
T Consensus 303 ~i~vd~~~~t~~~~IyA~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 345 (479)
T 2hqm_A 303 QIIADEYQNTNVPNIYSLGDVVGKVE-----LTPVAIAAGRKLSNRLF 345 (479)
T ss_dssp CBCCCTTCBCSSTTEEECGGGTTSSC-----CHHHHHHHHHHHHHHHH
T ss_pred CEeECCCCccCCCCEEEEEecCCCcc-----cHHHHHHHHHHHHHHhc
Confidence 44445555555679999999975422 13678899999988875
No 98
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.29 E-value=8.4e-12 Score=122.30 Aligned_cols=64 Identities=17% Similarity=0.225 Sum_probs=53.9
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEE---------------cCCceEEEEecCCeEE--ecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITE---------------STSGHRLVACEHDMIV--PCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~---------------~~~~~~~V~~~~g~~i--~a~~vI~A~G~~s 247 (375)
+.+++..+...|.+.+++.|++++ +++|+++.. ++++.+.|++.+| ++ .||.||+|+|+++
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 467888999999999999999999 899999987 4443457888888 68 9999999999987
Q ss_pred ccc
Q 017240 248 GKL 250 (375)
Q Consensus 248 ~~~ 250 (375)
..+
T Consensus 255 ~~l 257 (448)
T 3axb_A 255 NRL 257 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 99
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.28 E-value=7.5e-11 Score=118.02 Aligned_cols=150 Identities=14% Similarity=0.128 Sum_probs=114.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||..|+.+|..|++.|.+|+++|+.......
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 57999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCce---EEEEecCCe-EEecCEEEEccCCCCcc--ccc-----ccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGH---RLVACEHDM-IVPCRLATVASGAASGK--LLE-----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~---~~V~~~~g~-~i~a~~vI~A~G~~s~~--~~~-----~~~ 255 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..++++. +.|++.+|+ ++.+|.||+|+|..+.. ... ..+
T Consensus 253 ~-~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~ 331 (523)
T 1mo9_A 253 K-DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGP 331 (523)
T ss_dssp C-SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCT
T ss_pred c-cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCC
Confidence 1 23467778888889999999 99999998755532 678888887 89999999999987654 221 123
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+....++|+++||.+..... ...|..+|..+|..|.
T Consensus 332 ~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 332 KGEVLVNEYLQTSVPNVYAVGDLIGGPME-----MFKARKSGCYAARNVM 376 (523)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGGCSSCS-----HHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCccCCCCEEEEeecCCCccc-----HHHHHHHHHHHHHHHc
Confidence 34455555555566799999999865321 3678899999888875
No 100
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.28 E-value=6e-11 Score=120.26 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=86.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC-C----CCcC-----------cHHHHH----h-cCC--chhh
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-N----NYGV-----------WEDEFR----D-LGL--EGCI 162 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~----~~g~-----------~~~~l~----~-~g~--~~~~ 162 (375)
.++||||||||++|+++|+.|++.|.+|+||||..... . .-|+ +...+. . .++ ...+
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 35899999999999999999999999999999975431 0 0011 111111 1 111 1111
Q ss_pred hh----------hcccceEEeCC---CCCe--eec-CC-------c------eeecHHHHHHHHHHHHHHCCceEE-EEE
Q 017240 163 EH----------VWRDTVVYIDE---DEPI--LIG-RA-------Y------GRVSRHLLHEELLRRCVESGVSYL-SSK 212 (375)
Q Consensus 163 ~~----------~~~~~~~~~~~---~~~~--~~~-~~-------~------~~v~~~~l~~~L~~~~~~~gv~i~-~~~ 212 (375)
.. ......+.+.. .... ..+ .. . .......+...|.+.+++.|++++ ++.
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~ 165 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcE
Confidence 00 00000011110 0000 000 00 0 011246788999999999999999 999
Q ss_pred EEEEEEc-CCceEEEEe---cCCe--EEecCEEEEccCCCCcc
Q 017240 213 VESITES-TSGHRLVAC---EHDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 213 v~~i~~~-~~~~~~V~~---~~g~--~i~a~~vI~A~G~~s~~ 249 (375)
|+++..+ ++.+..|.. .+|+ ++.|+.||+|||+++..
T Consensus 166 v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 166 ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 9999875 443455553 4553 68999999999998764
No 101
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.28 E-value=4.9e-11 Score=118.43 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=113.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHC---CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~---G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
-.|+|||||+.|+.+|..|++. |.+|+|||+.+.....
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------- 228 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------------------------- 228 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---------------------------------------
Confidence 5899999999999999999999 9999999987532211
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc---cc-----ccC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL---LE-----YEE 255 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~---~~-----~~~ 255 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++.+.|++.+|+++.+|.||+|+|..+... .. ..+
T Consensus 229 ---~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~ 304 (490)
T 1fec_A 229 ---F-DSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAK 304 (490)
T ss_dssp ---S-CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCT
T ss_pred ---c-CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCC
Confidence 1 12466778888888999999 99999998765435778888888899999999999766441 11 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+....++|+++||.+.... -...|..+|..+++.|.
T Consensus 305 ~G~I~Vd~~~~t~~~~IyA~GD~~~~~~-----l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 305 NGAIKVDAYSKTNVDNIYAIGDVTDRVM-----LTPVAINEGAAFVDTVF 349 (490)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGGCSCC-----CHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCccCCCCEEEEeccCCCcc-----CHHHHHHHHHHHHHHhc
Confidence 3344455555555679999999986422 23678899999888875
No 102
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.28 E-value=3.6e-11 Score=116.38 Aligned_cols=155 Identities=21% Similarity=0.243 Sum_probs=117.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||+|+.|+.+|..|++.|.+|+++|+.+.....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~------------------------------------------ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR------------------------------------------ 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh------------------------------------------
Confidence 47999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---cc-Cceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YE-EWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~-~~~~~p~ 261 (375)
.....+.+.+.+.+++.||+++ ++.|+++..+++....|++.+|+++.+|.||+|+|..+.. +.. +. ... +.+
T Consensus 181 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~v 259 (404)
T 3fg2_P 181 VVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIV 259 (404)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEE
T ss_pred ccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEE
Confidence 0123567788888889999999 9999999887664567889999999999999999976543 211 11 112 444
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+...++..|. ....|..+|..+|..|.
T Consensus 260 d~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 260 DQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp CTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred CCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 444555567999999999888776653 25778888888888775
No 103
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.27 E-value=6.2e-11 Score=117.83 Aligned_cols=150 Identities=13% Similarity=0.151 Sum_probs=112.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC---CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~---G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
-.|+|||||..|+.+|..|++. |.+|+|||+.......
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------- 232 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG--------------------------------------- 232 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc---------------------------------------
Confidence 4899999999999999999999 9999999987532211
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c--c-----ccC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L--E-----YEE 255 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~--~-----~~~ 255 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++.+.|++.+|+++.+|.||+|+|..+..- + . ..+
T Consensus 233 ---~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~ 308 (495)
T 2wpf_A 233 ---F-DETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTP 308 (495)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCT
T ss_pred ---c-CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCC
Confidence 1 12466777888888999999 99999998765435778888888899999999999765432 1 1 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+....++|+++||.+.... -...|..+|..+|..|.
T Consensus 309 ~G~i~Vd~~~~t~~~~IyA~GD~~~~~~-----l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 309 KGGVQVDEFSRTNVPNIYAIGDITDRLM-----LTPVAINEGAALVDTVF 353 (495)
T ss_dssp TSSBCCCTTCBCSSTTEEECGGGGCSCC-----CHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCccCCCCEEEEeccCCCcc-----CHHHHHHHHHHHHHHhc
Confidence 3344445445555679999999986422 23678889999888875
No 104
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.27 E-value=5.3e-11 Score=115.58 Aligned_cols=156 Identities=22% Similarity=0.195 Sum_probs=117.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++|+.......
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------ 190 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR------------------------------------------ 190 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh------------------------------------------
Confidence 47999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---ccCceeeecC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YEEWSYIPVG 262 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~~~~~~p~~ 262 (375)
.....+.+.+.+.+++.||+++ ++.|+++..++++...|++.+|+++.||.||+|+|..+.. +.. .....-+.++
T Consensus 191 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~gi~vd 270 (415)
T 3lxd_A 191 VAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGGNGVDVD 270 (415)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCSSSEECC
T ss_pred hcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcCCCEEEC
Confidence 1123577788888889999999 9999999887654567899999899999999999976643 211 1111114445
Q ss_pred CCCCccCCCEEEEccCCCCCCCCC-hH-----HHHHHHhhHHHHHHHHH
Q 017240 263 GSLPNTEQRNLAFGAAASMVHPAT-GY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 263 ~~~~~~~~~v~liGdaa~~~~p~~-G~-----Gi~~al~~a~~~a~~i~ 305 (375)
..+....++|+++||.+...++.. |. ....|..+|..+|..|.
T Consensus 271 ~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 271 EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 445555679999999998877654 32 25778888988888775
No 105
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.27 E-value=4e-11 Score=118.44 Aligned_cols=155 Identities=17% Similarity=0.205 Sum_probs=116.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 108 LDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+|+|||+|+.|+.+|..|++. |.+|+++++........
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 199 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------------------------------- 199 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------------------------------------
Confidence 5799999999999999999999 99999999875322100
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-c-----ccccCceee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-L-----LEYEEWSYI 259 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~-----~~~~~~~~~ 259 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|.+.+|+++.+|.||+|+|..+.. + ....+...+
T Consensus 200 -~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i 276 (472)
T 3iwa_A 200 -T-SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENG-KVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAI 276 (472)
T ss_dssp -S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSS-BEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCE
T ss_pred -c-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCC-eEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCE
Confidence 1 13567788888889999999 999999987555 566888888899999999999976543 2 112233455
Q ss_pred ecCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 260 PVGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 260 p~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
.++..+....++|+++||.+...++.+|. -...|..+|..+|+.|.
T Consensus 277 ~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 277 IVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp ECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred EECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 55555555678999999998665554443 13568888888888775
No 106
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.26 E-value=8.3e-11 Score=116.55 Aligned_cols=150 Identities=16% Similarity=0.215 Sum_probs=114.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||+|+.|+.+|..|++.|.+|+++++.......+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~----------------------------------------- 230 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNF----------------------------------------- 230 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-----------------------------------------
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccccc-----------------------------------------
Confidence 589999999999999999999999999999875332111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c-------cccCcee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L-------EYEEWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~-------~~~~~~~ 258 (375)
...+.+.+.+.+++.|++++ ++.|+++..+++ .+.|++.+|+++.+|.||+|+|..+... + ...+...
T Consensus 231 --~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~ 307 (484)
T 3o0h_A 231 --DYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGA 307 (484)
T ss_dssp --CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSC
T ss_pred --CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCC
Confidence 12466777888888999999 999999988766 5688888998899999999999765432 1 1223344
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
+.++..+....++|+++||.+..... ...|+.+|..+|+.|..
T Consensus 308 i~vd~~~~t~~~~Iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 308 VVVDEKMTTNVSHIWAVGDVTGHIQL-----TPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp BCCCTTSBCSSTTEEECGGGGTSCCC-----HHHHHHHHHHHHHHHHC
T ss_pred EeECCCCCCCCCCEEEEEecCCCCcC-----HHHHHHHHHHHHHHHcC
Confidence 55555555567899999999864322 26788999988888764
No 107
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.26 E-value=2.9e-12 Score=123.37 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=87.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
..+|+|||||+||+++|..|...+.+|+|||++...+-....+...+..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g------------------------------- 57 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAK------------------------------- 57 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHS-------------------------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcC-------------------------------
Confidence 4689999999999999999988899999999886543111111111110
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccCc-eeeecCCC
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEEW-SYIPVGGS 264 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~~-~~~p~~~~ 264 (375)
..+...+.....+.+++.|++++ +++|+.++.++. .|++.+|+++.+|.||+|||+.+..+ +..+. ..+.....
T Consensus 58 ~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~~~~yd~lvlAtG~~p~~p-~i~G~~~v~~~~~~ 133 (385)
T 3klj_A 58 NKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNK---LVTLKSGEKIKYEKLIIASGSIANKI-KVPHADEIFSLYSY 133 (385)
T ss_dssp CCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEECCC-CCTTCSCEECCSSH
T ss_pred CCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEecCCCcCCC-CCCCCCCeEEeCCH
Confidence 00011112222344456899999 999999987655 67888898999999999999744322 21111 22221110
Q ss_pred C-----C---ccCCCEEEEccCC
Q 017240 265 L-----P---NTEQRNLAFGAAA 279 (375)
Q Consensus 265 ~-----~---~~~~~v~liGdaa 279 (375)
. . ..++++++||.+.
T Consensus 134 ~d~~~l~~~l~~~~~vvVIGgG~ 156 (385)
T 3klj_A 134 DDALKIKDECKNKGKAFIIGGGI 156 (385)
T ss_dssp HHHHHHHHHHHHHSCEEEECCSH
T ss_pred HHHHHHHHHhhcCCeEEEECCCH
Confidence 0 0 1167899999774
No 108
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.26 E-value=2.7e-11 Score=127.80 Aligned_cols=65 Identities=23% Similarity=0.317 Sum_probs=56.0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
.+.+++..+...|.+.+++.|++++ +++|+++..++++.+.|++.+| ++.||.||+|+|.++..+
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHH
Confidence 3577899999999999999999999 9999999987664557888887 799999999999987543
No 109
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.26 E-value=1.3e-10 Score=114.70 Aligned_cols=150 Identities=19% Similarity=0.238 Sum_probs=111.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC-CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG----------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------------------------------
Confidence 5799999999999999999999999999998753321 1
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-----cCCeEEecCEEEEccCCCCccc---c-----c
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-----EHDMIVPCRLATVASGAASGKL---L-----E 252 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-----~~g~~i~a~~vI~A~G~~s~~~---~-----~ 252 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++.+.|++ .++.++.+|.||+|+|..+... . .
T Consensus 218 -~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~ 295 (474)
T 1zmd_A 218 -I-DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIE 295 (474)
T ss_dssp -C-CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCC
T ss_pred -c-CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCc
Confidence 1 12466777888888999999 9999999877653255653 4567899999999999765432 1 1
Q ss_pred ccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 253 YEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 253 ~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
..+...+.++..+....++|+++||.+....- ...|..+|..+|+.|.
T Consensus 296 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 343 (474)
T 1zmd_A 296 LDPRGRIPVNTRFQTKIPNIYAIGDVVAGPML-----AHKAEDEGIICVEGMA 343 (474)
T ss_dssp CCTTSCCCCCTTCBCSSTTEEECGGGSSSCCC-----HHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEECcCCccCCCCEEEeeecCCCCcc-----HHHHHHHHHHHHHHhc
Confidence 12234455555555556799999999864321 2678889998888875
No 110
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.26 E-value=5.9e-11 Score=119.77 Aligned_cols=155 Identities=17% Similarity=0.174 Sum_probs=116.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||+.|+.+|..|++.|.+|+++++.......
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 189 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------------------------------ 189 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------------------------------
Confidence 47999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEc------------------CCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES------------------TSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~------------------~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+ .++.+.+.+.+|+++.+|.||+|+|..+.
T Consensus 190 ~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 190 V-DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred c-CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 1 12466777788888999999 9999999873 23356777888889999999999997654
Q ss_pred cc------ccccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHH-----HHHHHhhHHHHHHHHH
Q 017240 249 KL------LEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYS-----VVRSLSEAPNYASAIA 305 (375)
Q Consensus 249 ~~------~~~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~G-----i~~al~~a~~~a~~i~ 305 (375)
.. ....+...+.++..+....++|+++||.+...++.+|.- ...|..+|..+|+.|.
T Consensus 269 ~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 269 TQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp CHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred hHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 32 112233445555555556789999999987666555532 4678888988888875
No 111
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.26 E-value=1.5e-10 Score=115.20 Aligned_cols=129 Identities=13% Similarity=0.142 Sum_probs=98.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 214 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------------------------------ 214 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------------------------------
Confidence 58999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeE-EecCEEEEccCCCCcc-cc--ccc----Ccee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMI-VPCRLATVASGAASGK-LL--EYE----EWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~-i~a~~vI~A~G~~s~~-~~--~~~----~~~~ 258 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++.+.|++.+|++ +.+|.||+|+|..+.. .+ ... +...
T Consensus 215 ~-d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~ 293 (500)
T 1onf_A 215 F-DESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNY 293 (500)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSC
T ss_pred c-chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCE
Confidence 1 12466777888888999999 999999987654346788888877 9999999999977654 11 111 2333
Q ss_pred eecCCCCCccCCCEEEEccCC
Q 017240 259 IPVGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa 279 (375)
+.++..+....++|+++||.+
T Consensus 294 i~vd~~~~t~~~~iya~GD~~ 314 (500)
T 1onf_A 294 IVVDENQRTSVNNIYAVGDCC 314 (500)
T ss_dssp EEECTTCBCSSSSEEECSTTE
T ss_pred EEECCCcccCCCCEEEEeccc
Confidence 445555555567999999998
No 112
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.26 E-value=7.2e-11 Score=115.28 Aligned_cols=155 Identities=22% Similarity=0.259 Sum_probs=115.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+++|+.......
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER------------------------------------------ 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999987432111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEE--cCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---cc-Cceee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITE--STSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YE-EWSYI 259 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~--~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~-~~~~~ 259 (375)
.....+.+.+.+.+++.||+++ ++.|+++.. +++....|++.+|+++.+|.||+|+|..+.. +.. +. ... +
T Consensus 188 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~g-i 266 (431)
T 1q1r_A 188 VTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDNG-I 266 (431)
T ss_dssp TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-E
T ss_pred hhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCCC-E
Confidence 0012466677788888999999 999999987 4443457888889899999999999976542 211 11 112 4
Q ss_pred ecCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 260 PVGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 260 p~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
.++..+....++|+++||.+...++..|. -+..|..+|..+|..|.
T Consensus 267 ~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 267 VINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp ECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred EECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 44544555567999999999887776553 35678899999888875
No 113
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.26 E-value=1.1e-10 Score=114.99 Aligned_cols=149 Identities=17% Similarity=0.205 Sum_probs=113.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++.......
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~------------------------------------------ 208 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR------------------------------------------ 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 57999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEE-ecCCeEEecCEEEEccCCCCccc---c-----cccCce
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVA-CEHDMIVPCRLATVASGAASGKL---L-----EYEEWS 257 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~-~~~g~~i~a~~vI~A~G~~s~~~---~-----~~~~~~ 257 (375)
+ ...+.+.+.+.+++.|++++ ++.|+++..++++.+.|+ +.+|+ +.+|.||+|+|..+... . ...+..
T Consensus 209 ~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G 286 (463)
T 4dna_A 209 F-DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELG 286 (463)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTS
T ss_pred c-CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCC
Confidence 1 12467778888889999999 999999988766456788 88887 99999999999765432 1 112334
Q ss_pred eeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 258 YIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 258 ~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+.++..+....++|+++||.+..... ...|..+|..+|+.|.
T Consensus 287 ~i~vd~~~~t~~~~iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 329 (463)
T 4dna_A 287 AIIVDAFSRTSTPGIYALGDVTDRVQL-----TPVAIHEAMCFIETEY 329 (463)
T ss_dssp CBCCCTTCBCSSTTEEECSGGGSSCCC-----HHHHHHHHHHHHHHHH
T ss_pred CEeECcCCCCCCCCEEEEEecCCCCCC-----hHHHHHHHHHHHHHHc
Confidence 455555555566899999998874222 2678899998888875
No 114
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.26 E-value=6.5e-11 Score=117.23 Aligned_cols=150 Identities=16% Similarity=0.131 Sum_probs=112.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||+.|+.+|..|++.|.+|+|||+.+.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 223 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------------------------------ 223 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 58999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC----CeEEecCEEEEccCCCCccc-c--c-----cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH----DMIVPCRLATVASGAASGKL-L--E-----YE 254 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~----g~~i~a~~vI~A~G~~s~~~-~--~-----~~ 254 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++.+ |+++.+|.||+|+|..+..- + . ..
T Consensus 224 ~-~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~ 301 (482)
T 1ojt_A 224 A-DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED-GVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVT 301 (482)
T ss_dssp S-CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT-EEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCC
T ss_pred c-CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC-eEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeC
Confidence 1 12466777888888999999 999999987665 56677766 66789999999999766431 1 1 12
Q ss_pred CceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 255 EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 255 ~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
....+.++..+....++|+++||.+.... . ...|..+|..+|+.|..
T Consensus 302 ~~G~i~vd~~~~t~~~~IyA~GD~~~~~~-l----~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 302 DRGFIEVDKQMRTNVPHIYAIGDIVGQPM-L----AHKAVHEGHVAAENCAG 348 (482)
T ss_dssp TTSCCCCCTTSBCSSTTEEECGGGTCSSC-C----HHHHHHHHHHHHHHHTT
T ss_pred CCCCEeeCCCcccCCCCEEEEEcccCCCc-c----HHHHHHHHHHHHHHHcC
Confidence 22445555555556779999999987422 1 36788999998888753
No 115
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.26 E-value=1.1e-10 Score=116.13 Aligned_cols=149 Identities=17% Similarity=0.155 Sum_probs=113.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|+.|+.+|..|++.|.+|+++|+.+.....
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------------------------------------------ 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 57999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-cc--c-----ccCcee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LL--E-----YEEWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~--~-----~~~~~~ 258 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++.+|.++.+|.||+|+|..+.. ++ . ..+...
T Consensus 221 ~-d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~ 298 (499)
T 1xdi_A 221 E-DADAALVLEESFAERGVRLFKNARAASVTRTGA-GVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNY 298 (499)
T ss_dssp S-SHHHHHHHHHHHHHTTCEEETTCCEEEEEECSS-SEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTB
T ss_pred c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-EEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCC
Confidence 1 12467778888889999999 999999987665 467778888889999999999977654 21 1 122234
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
+.++..+....++|+++||.+....- ...|..+|..+|+.|.
T Consensus 299 i~Vd~~~~t~~~~IyA~GD~~~~~~l-----~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 299 LTVDRVSRTLATGIYAAGDCTGLLPL-----ASVAAMQGRIAMYHAL 340 (499)
T ss_dssp CCCCSSSBCSSTTEEECSGGGTSCSC-----HHHHHHHHHHHHHHHT
T ss_pred EEECCCcccCCCCEEEEeccCCCccc-----HHHHHHHHHHHHHHhc
Confidence 45555555566799999999864321 3578888988888775
No 116
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.25 E-value=3.1e-11 Score=118.42 Aligned_cols=155 Identities=17% Similarity=0.164 Sum_probs=110.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
..+|+|||||++|+.+|..|++.|.+|+|+|+.......+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------------------------------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----------------------------------------
Confidence 3689999999999999999999999999999875332110
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-cc----ccCceeee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-LE----YEEWSYIP 260 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~~----~~~~~~~p 260 (375)
+ ...+.+.+.+.+++.|++++ ++.|+++..+ +....|.+ ++.++.+|.||+|+|..+... .. ......+.
T Consensus 189 -~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~ 264 (447)
T 1nhp_A 189 -L-DKEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIK 264 (447)
T ss_dssp -C-CHHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBC
T ss_pred -C-CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEE
Confidence 1 13467788888888999999 8999999865 32335666 456899999999999765432 11 11223344
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
++..+....++|+++||.+...++.+|. -...|..+|..++..|.
T Consensus 265 Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 265 TDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp CCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred ECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 4444445567999999998765433331 24778888988888775
No 117
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.25 E-value=1.1e-10 Score=112.04 Aligned_cols=153 Identities=17% Similarity=0.201 Sum_probs=111.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||+|++|+.+|..|++.|.+|+|+|+.......
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 183 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG------------------------------------------ 183 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc------------------------------------------
Confidence 57999999999999999999999999999987532211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---c-cCceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---Y-EEWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~-~~~~~~p~ 261 (375)
.....+.+.+.+.+++.|++++ ++.|+++..+++ .+.|++.+|+++.+|.||+|+|..+.. +.. . .... +.+
T Consensus 184 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~v 261 (384)
T 2v3a_A 184 LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE-GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVV 261 (384)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEE
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC-EEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEE
Confidence 1123567788888888999999 999999987665 678888888899999999999977654 211 1 0123 445
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+....+... -...+..+|..+|+.|.
T Consensus 262 d~~~~t~~~~IyA~GD~~~~~~~~~~-~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 262 DRSLRTSHANIYALGDCAEVDGLNLL-YVMPLMACARALAQTLA 304 (384)
T ss_dssp CTTCBCSSTTEEECGGGEEETTBCCC-SHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCEEEeeeeeeECCCCcc-hHHHHHHHHHHHHHHhc
Confidence 55555556799999999853221111 12456778888777764
No 118
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.25 E-value=1.5e-10 Score=114.10 Aligned_cols=149 Identities=18% Similarity=0.184 Sum_probs=110.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------------------------------ 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-CC--eEEecCEEEEccCCCCcccc--------cccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATVASGAASGKLL--------EYEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~g--~~i~a~~vI~A~G~~s~~~~--------~~~~ 255 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++. +| .++.+|.||+|+|..+.... ...+
T Consensus 210 ~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~ 287 (464)
T 2a8x_A 210 E-DADVSKEIEKQFKKLGVTILTATKVESIADGGS-QVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTD 287 (464)
T ss_dssp S-CHHHHHHHHHHHHHHTCEEECSCEEEEEEECSS-CEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCT
T ss_pred c-CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCC-eEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCC
Confidence 1 12466677788888999999 999999987655 4566654 56 68999999999997654321 1122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+....++|+++||.+....- ...|..+|..+|..|.
T Consensus 288 ~G~i~vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 288 RKAIGVDDYMRTNVGHIYAIGDVNGLLQL-----AHVAEAQGVVAAETIA 332 (464)
T ss_dssp TSSBCCCTTSBCSSTTEEECGGGGCSSCS-----HHHHHHHHHHHHHHHH
T ss_pred CCCEeECcCCccCCCCEEEeECcCCCccC-----HHHHHHHHHHHHHHhc
Confidence 34455555555567799999999864321 3678899999888875
No 119
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.24 E-value=1e-10 Score=118.97 Aligned_cols=144 Identities=22% Similarity=0.280 Sum_probs=87.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC-----CCcC-----------cHHHHHh-----cCC--chhhh
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-----NYGV-----------WEDEFRD-----LGL--EGCIE 163 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~-----~~g~-----------~~~~l~~-----~g~--~~~~~ 163 (375)
.+||||||||+||+++|+.|++.|++|+||||...... .-|+ |...+.+ .++ +..+.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 58999999999999999999999999999999754221 0111 1111111 011 11000
Q ss_pred ----------hhcccceEEeCCCC-C-ee---ec---CCc-------e-----eecHHHHHHHHHHHHHHCCceEE-EEE
Q 017240 164 ----------HVWRDTVVYIDEDE-P-IL---IG---RAY-------G-----RVSRHLLHEELLRRCVESGVSYL-SSK 212 (375)
Q Consensus 164 ----------~~~~~~~~~~~~~~-~-~~---~~---~~~-------~-----~v~~~~l~~~L~~~~~~~gv~i~-~~~ 212 (375)
.......+.+.... . .. .+ .++ . ......+...|.+.+.+.|++++ ++.
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~~ 177 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYF 177 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEceE
Confidence 00000001111000 0 00 00 000 0 11346888999999988999999 999
Q ss_pred EEEEEEcCCceEEEEe---cCCe--EEecCEEEEccCCCCccc
Q 017240 213 VESITESTSGHRLVAC---EHDM--IVPCRLATVASGAASGKL 250 (375)
Q Consensus 213 v~~i~~~~~~~~~V~~---~~g~--~i~a~~vI~A~G~~s~~~ 250 (375)
|+++..+++.+..|.+ .+|+ .+.|+.||+|||+++...
T Consensus 178 v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y 220 (621)
T 2h88_A 178 ALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTY 220 (621)
T ss_dssp EEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred EEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccccc
Confidence 9999876654445544 3563 689999999999988653
No 120
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.24 E-value=7.4e-11 Score=116.79 Aligned_cols=153 Identities=18% Similarity=0.183 Sum_probs=112.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 224 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------------------------------ 224 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------------------------------
Confidence 58999999999999999999999999999987432211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc-----ccCceeee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE-----YEEWSYIP 260 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~-----~~~~~~~p 260 (375)
+ ...+.+.+.+.+++.|++++ ++.|+++..++. ...|.+++ .++.+|.||+|+|..+.. +.. ..+...+.
T Consensus 225 ~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-v~~v~~~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~ 301 (480)
T 3cgb_A 225 Y-DGDMAEYIYKEADKHHIEILTNENVKAFKGNER-VEAVETDK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIE 301 (480)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSB-EEEEEETT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBC
T ss_pred C-CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCc-EEEEEECC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEE
Confidence 1 12466778888888999999 999999986532 44566654 489999999999976543 221 11223444
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
++..+....++|+++||.+...++.+|. -...|..+|..+|..|.
T Consensus 302 Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 302 VNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp CCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred ECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 4554555567999999998776655442 25788999999888875
No 121
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.24 E-value=4.7e-11 Score=115.25 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=69.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+|||||||+||+++|..|++.+ .+|+|||++...... ..+...+.. ... ....
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~v~~g--~~~-----------------~~~~---- 58 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-YMSNEVIGG--DRE-----------------LASL---- 58 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-TTHHHHHHT--SSC-----------------GGGG----
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-cCHHHHhcC--CCC-----------------HHHH----
Confidence 36999999999999999999876 589999987543211 111111110 000 0000
Q ss_pred eeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
..+. +.+.+.|++++..+|+.|+.+.. .|++.+|.++.+|.+|+|+|+.
T Consensus 59 -~~~~--------~~~~~~gv~~i~~~v~~id~~~~---~v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 59 -RVGY--------DGLRAHGIQVVHDSALGIDPDKK---LVKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp -EECS--------HHHHHTTCEEECSCEEEEETTTT---EEEETTSCEEECSEEEECCCEE
T ss_pred -hhCH--------HHHHHCCCEEEEeEEEEEEccCc---EEEecccceeecceeeeccCCc
Confidence 0011 12335799999778999987765 6788899899999999999964
No 122
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.24 E-value=2.4e-11 Score=120.64 Aligned_cols=170 Identities=14% Similarity=0.205 Sum_probs=88.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHHH-H-HhcCCchhhhhhcccceEEeCCCCCee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWEDE-F-RDLGLEGCIEHVWRDTVVYIDEDEPIL 180 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~~-l-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
..+||+||||||+|+++|+.|++.|++|+|||+....+.. +|+++.. + .................+..... ...
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~-~~~ 102 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP-KLN 102 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-EEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-ccC
Confidence 3589999999999999999999999999999987655422 2222211 0 00000000000001111111000 000
Q ss_pred ecCCcee--ecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCccccccc--
Q 017240 181 IGRAYGR--VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLLEYE-- 254 (375)
Q Consensus 181 ~~~~~~~--v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~~~~-- 254 (375)
+...... -....+...+...+++.+++++...+..+ +.+ .+.|.+.+| .++.+|.||+|||+..+.+....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~-~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~ 179 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVL--GQG-KVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVA 179 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEC--SSS-EEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCC-EEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccc
Confidence 0000000 00112333445556678999984444433 223 677777777 57999999999997643332211
Q ss_pred --Cceeeec--CCCCCccCCCEEEEccCC
Q 017240 255 --EWSYIPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 255 --~~~~~p~--~~~~~~~~~~v~liGdaa 279 (375)
...++.. ...+...++++++||.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~vvViGgG~ 208 (491)
T 3urh_A 180 FDEKTIVSSTGALALEKVPASMIVVGGGV 208 (491)
T ss_dssp CCSSSEECHHHHTSCSSCCSEEEEECCSH
T ss_pred cCCeeEEehhHhhhhhhcCCeEEEECCCH
Confidence 1112111 112334578999999764
No 123
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.23 E-value=6.2e-11 Score=116.38 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=113.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||||+.|+.+|..|++.|.+|+|+|+........
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY----------------------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------------------------------
Confidence 479999999999999999999999999999875322100
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-cc----ccCceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-LE----YEEWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~~----~~~~~~~p~ 261 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..++++...|.+ +|.++.+|.||+|+|..+... .. ..+...+.+
T Consensus 189 ~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~V 266 (452)
T 2cdu_A 189 F-DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIIT 266 (452)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCC
T ss_pred h-hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEE
Confidence 1 12467778888889999999 9999999864442333554 677899999999999765432 11 112333445
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+...++.+|. -...|..+|..+|+.|.
T Consensus 267 d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 267 DEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp CTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 555555567999999999876655552 35788899999888775
No 124
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.23 E-value=2.9e-10 Score=105.88 Aligned_cols=154 Identities=19% Similarity=0.185 Sum_probs=111.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|++|+.+|..|++.|.+|+++++.....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-------------------------------------------- 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--------------------------------------------
Confidence 479999999999999999999999999999874221
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC----C--eEEecCEEEEccCCCCcc-ccc----ccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH----D--MIVPCRLATVASGAASGK-LLE----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~----g--~~i~a~~vI~A~G~~s~~-~~~----~~~ 255 (375)
....+.+.+.+.+++.||+++ ++.|+++..++++...|++.+ | .++.+|.||+|+|..+.. +.. ..
T Consensus 182 -~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~- 259 (320)
T 1trb_A 182 -AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELE- 259 (320)
T ss_dssp -CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEE-
T ss_pred -cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhccccccc-
Confidence 012355667777888999999 999999987764444465543 4 579999999999966533 211 11
Q ss_pred ceeeecCCCC-----CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 256 WSYIPVGGSL-----PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 256 ~~~~p~~~~~-----~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
...+.+...+ ....++|+++||.+.... . ....|+.+|..+|..|...|.+.
T Consensus 260 ~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~-~---~~~~A~~~g~~aa~~i~~~l~~~ 316 (320)
T 1trb_A 260 NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIY-R---QAITSAGTGCMAALDAERYLDGL 316 (320)
T ss_dssp TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSS-C---CHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CceEEECCCcccccccCCCCCEEEcccccCCcc-h---hhhhhhccHHHHHHHHHHHHHhc
Confidence 2334444332 334578999999987532 1 24778999999999999999754
No 125
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.23 E-value=1.9e-10 Score=113.35 Aligned_cols=151 Identities=20% Similarity=0.233 Sum_probs=110.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||||+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------------------------------ 212 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------------------------------
Confidence 57999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHH-HHCCceEE-EEEEEEEEEcCCceEEEEec--CC--eEEecCEEEEccCCCCcccc--------cc
Q 017240 188 VSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVACE--HD--MIVPCRLATVASGAASGKLL--------EY 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~V~~~--~g--~~i~a~~vI~A~G~~s~~~~--------~~ 253 (375)
+ ...+.+.+.+.+ ++.||+++ +++|+++..+++ .+.|++. +| .++.+|.||+|+|..+.... ..
T Consensus 213 ~-d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~ 290 (468)
T 2qae_A 213 L-DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGD-SVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAK 290 (468)
T ss_dssp S-CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSS-SEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCB
T ss_pred C-CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCC-eEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCcc
Confidence 1 124667778888 88999999 999999987665 4566654 56 67999999999997654321 11
Q ss_pred cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 254 ~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
.+...+.++..+....++|+++||.+.. .|.. ...|..+|..+|..|..
T Consensus 291 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~-~~~~---~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 291 NERGFVKIGDHFETSIPDVYAIGDVVDK-GPML---AHKAEDEGVACAEILAG 339 (468)
T ss_dssp CTTSCBCCCTTSBCSSTTEEECGGGBSS-SCSC---HHHHHHHHHHHHHHHTT
T ss_pred CCCCCEeECCCcccCCCCEEEeeccCCC-CCcc---HhHHHHHHHHHHHHHcC
Confidence 2234455555555567799999999873 1221 36788899988888753
No 126
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.23 E-value=2.7e-11 Score=119.54 Aligned_cols=160 Identities=21% Similarity=0.221 Sum_probs=89.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHH-HHHh-cCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWED-EFRD-LGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~-~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.|||+||||||+|+++|+.|++.|++|+|||+....+.. .|+.+. .+.. ......... ... ......+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~-~~~------~~~~~~~ 76 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTN-IAN------VKIPLDF 76 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-HHC------SCCCCCH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHh-ccc------CCCCcCH
Confidence 489999999999999999999999999999977655422 222111 0000 000000000 000 0000000
Q ss_pred cCCceeecHHH---HH--HHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeE--EecCEEEEccCCCCccccccc
Q 017240 182 GRAYGRVSRHL---LH--EELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMI--VPCRLATVASGAASGKLLEYE 254 (375)
Q Consensus 182 ~~~~~~v~~~~---l~--~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~--i~a~~vI~A~G~~s~~~~~~~ 254 (375)
... .-.... +. ..+.+.+++.|++++...++.++. + .+.|.+.+|++ +.+|.||+|+|+.+..+ +..
T Consensus 77 ~~~--~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~--~-~~~V~~~~g~~~~~~~d~lviAtG~~p~~p-~i~ 150 (466)
T 3l8k_A 77 STV--QDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDP--T-HVIVKTDEGKEIEAETRYMIIASGAETAKL-RLP 150 (466)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEET--T-EEEEEETTSCEEEEEEEEEEECCCEEECCC-CCT
T ss_pred HHH--HHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecC--C-eEEEEcCCCcEEEEecCEEEECCCCCccCC-CCC
Confidence 000 000111 22 445555566799999447777753 2 67888888877 99999999999644322 111
Q ss_pred Cc-eeee------cCCCCCccCCCEEEEccCC
Q 017240 255 EW-SYIP------VGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 255 ~~-~~~p------~~~~~~~~~~~v~liGdaa 279 (375)
+. .++. ....+...++++++||.+.
T Consensus 151 G~~~~~t~~~~~~~~~~l~~~~~~vvViGgG~ 182 (466)
T 3l8k_A 151 GVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGY 182 (466)
T ss_dssp TGGGSBCHHHHHSTTCSCCSCCSEEEEECCSH
T ss_pred CccceEeHHHHHHHHHHHhhCCCeEEEECCCH
Confidence 11 1111 1112334567899999764
No 127
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.23 E-value=4e-11 Score=120.40 Aligned_cols=144 Identities=18% Similarity=0.220 Sum_probs=79.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC-----CcCc---------H----HHHHh-cCCc--hhhh
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-----YGVW---------E----DEFRD-LGLE--GCIE 163 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-----~g~~---------~----~~l~~-~g~~--~~~~ 163 (375)
..++||||||||++|+++|+.|++ |.+|+||||......+ -|++ . +.+.. .++. ..+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 346899999999999999999999 9999999998654311 1111 0 11111 0110 0000
Q ss_pred ----------hhcccceEEeCCCC-----C-eee----c----CCc--eeecHHHHHHHHHHHHHH-CCceEE-EEEEEE
Q 017240 164 ----------HVWRDTVVYIDEDE-----P-ILI----G----RAY--GRVSRHLLHEELLRRCVE-SGVSYL-SSKVES 215 (375)
Q Consensus 164 ----------~~~~~~~~~~~~~~-----~-~~~----~----~~~--~~v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~ 215 (375)
.......+.++... . ... + +.+ +......+...|.+.+++ .||+++ ++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 00000000010000 0 000 0 000 012344677788888888 799999 999999
Q ss_pred EEE-cCC------ceEEEEec---CCe--EEecCEEEEccCCCCcc
Q 017240 216 ITE-STS------GHRLVACE---HDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 216 i~~-~~~------~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~ 249 (375)
+.. +++ .+..|.+. +|+ ++.|+.||+|||+++..
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred EEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 987 433 34455543 564 78999999999998754
No 128
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.23 E-value=1.3e-10 Score=114.50 Aligned_cols=150 Identities=17% Similarity=0.214 Sum_probs=110.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CC--eEEecCEEEEccCCCCccc---cc-----c
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASGKL---LE-----Y 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g--~~i~a~~vI~A~G~~s~~~---~~-----~ 253 (375)
. ...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++. +| .++.+|.||+|+|..+... .. .
T Consensus 216 ~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 293 (470)
T 1dxl_A 216 M-DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGD-GVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVET 293 (470)
T ss_dssp S-CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSS-SEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCB
T ss_pred c-cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCC-eEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCcc
Confidence 1 12466777888888999999 999999987655 3556553 44 6899999999999765432 11 1
Q ss_pred cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 254 ~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
.+...+.++..+....++|+++||.+.... . ...|..+|..+|..|..
T Consensus 294 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~--~---~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 294 DKLGRILVNERFSTNVSGVYAIGDVIPGPM--L---AHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CSSSCBCCCTTCBCSSTTEEECSTTSSSCC--C---HHHHHHHHHHHHHHHTT
T ss_pred CCCCCEeECcCCccCCCCEEEEeccCCCCc--c---HHHHHHHHHHHHHHHcC
Confidence 223345555555555679999999986422 1 25788899998888763
No 129
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.22 E-value=9.6e-11 Score=116.28 Aligned_cols=154 Identities=16% Similarity=0.125 Sum_probs=112.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+........
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 233 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY----------------------------------------- 233 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------------------------------
Confidence 579999999999999999999999999999875332100
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c----cccCceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L----EYEEWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~----~~~~~~~~p~ 261 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++..+ +....|.+ +|.++.+|.||+|+|..+... . ...+...+.+
T Consensus 234 ~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~V 310 (490)
T 2bc0_A 234 Y-DRDLTDLMAKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLV 310 (490)
T ss_dssp S-CHHHHHHHHHHHHTTTCEEEETCCEEEEECS-SSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCC
T ss_pred H-HHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEE
Confidence 1 12466778888888999999 9999999863 32334555 567899999999999765432 1 1112333444
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+...++.+|. -...|..+|..+|..|.
T Consensus 311 d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 311 NKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp CTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 544555567999999999876554442 35788999999888885
No 130
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.22 E-value=3.1e-10 Score=112.61 Aligned_cols=149 Identities=18% Similarity=0.218 Sum_probs=111.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.+.....+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 237 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGM----------------------------------------- 237 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccC-----------------------------------------
Confidence 579999999999999999999999999999875332111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC---C--eEEecCEEEEccCCCCccc-c-------cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAASGKL-L-------EY 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g--~~i~a~~vI~A~G~~s~~~-~-------~~ 253 (375)
...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|.+.+ | .++.+|.||+|+|..+... + ..
T Consensus 238 --d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~ 314 (491)
T 3urh_A 238 --DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD-GAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVL 314 (491)
T ss_dssp --CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCB
T ss_pred --CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC-EEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceE
Confidence 13467777888888999999 999999988766 55565542 4 6899999999999765432 1 12
Q ss_pred cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 254 ~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+...+.++..+....++|+++||.+.... -...|..+|..+|+.|.
T Consensus 315 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 361 (491)
T 3urh_A 315 DSRGRVEIDRHFQTSIAGVYAIGDVVRGPM-----LAHKAEDEGVAVAEIIA 361 (491)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGSSSCC-----CHHHHHHHHHHHHHHHT
T ss_pred CCCCCEeECCCCCCCCCCEEEEEecCCCcc-----chhHHHHHHHHHHHHHc
Confidence 233445555555566789999999885432 23678888988888775
No 131
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.22 E-value=3.4e-10 Score=111.88 Aligned_cols=151 Identities=16% Similarity=0.151 Sum_probs=111.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+++.+.....+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 226 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSF----------------------------------------- 226 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccccc-----------------------------------------
Confidence 579999999999999999999999999999875322111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc-eEEEEecC-------CeEEecCEEEEccCCCCccc-c------
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEH-------DMIVPCRLATVASGAASGKL-L------ 251 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~V~~~~-------g~~i~a~~vI~A~G~~s~~~-~------ 251 (375)
...+.+.+.+.+++.||+++ ++.|+++...+++ .+.|.+.+ |.++.+|.||+|+|..+... +
T Consensus 227 --d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g 304 (478)
T 3dk9_A 227 --DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLG 304 (478)
T ss_dssp --CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGT
T ss_pred --CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcC
Confidence 12466777788888999999 9999999877664 35666654 25799999999999655432 1
Q ss_pred -cccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 252 -EYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 252 -~~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
...+...+.++..+....++|+++||.+..... ...|..+|..+|+.|..
T Consensus 305 ~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 305 IQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALL-----TPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CCBCTTCCBCCCTTCBCSSTTEEECGGGGCSSCC-----HHHHHHHHHHHHHHHHS
T ss_pred CeeCCCCCEeeCCCcccCCCCEEEEEecCCCCcc-----HhHHHHHHHHHHHHHcC
Confidence 112334455555555567899999999854322 36788889888887753
No 132
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.21 E-value=1.1e-10 Score=114.85 Aligned_cols=146 Identities=20% Similarity=0.185 Sum_probs=107.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||++|+.+|..|++.|.+|+|+|+.+.....
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------------------------------ 209 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 57999999999999999999999999999987533211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCcccc---cc-----cCc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLL---EY-----EEW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~---~~-----~~~ 256 (375)
. ...+.+.+.+.+++.||+++ ++.|+++.. + .+.++..+| .++.+|.||+|+|..+.... .. ...
T Consensus 210 ~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~ 285 (458)
T 1lvl_A 210 Y-DSELTAPVAESLKKLGIALHLGHSVEGYEN--G-CLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA 285 (458)
T ss_dssp S-CHHHHHHHHHHHHHHTCEEETTCEEEEEET--T-EEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT
T ss_pred c-CHHHHHHHHHHHHHCCCEEEECCEEEEEEe--C-CEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC
Confidence 0 12456677777888999999 999999976 3 255554456 68999999999997654321 11 122
Q ss_pred eeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 257 SYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 257 ~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+.++..+....++|+++||.+....- ...|..+|..+|..|.
T Consensus 286 -~i~vd~~~~t~~~~Iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 286 -AIAIDERCQTSMHNVWAIGDVAGEPML-----AHRAMAQGEMVAEIIA 328 (458)
T ss_dssp -EECCCTTCBCSSTTEEECGGGGCSSCC-----HHHHHHHHHHHHHHHT
T ss_pred -EEeECCCCcCCCCCEEEeeccCCCccc-----HHHHHHHHHHHHHHhc
Confidence 455555555556799999999875321 2678888888888875
No 133
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.21 E-value=7.5e-11 Score=114.37 Aligned_cols=154 Identities=21% Similarity=0.167 Sum_probs=115.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||+|+.|+.+|..|++.|.+|+++|+.+.... .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~------~------------------------------------ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV------R------------------------------------ 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH------H------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch------h------------------------------------
Confidence 5799999999999999999999999999998753210 0
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---ccCceeeecC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YEEWSYIPVG 262 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~~~~~~p~~ 262 (375)
.....+.+.+.+.+++.||+++ ++.|+++..++. ...|++.+|+++.+|.||+|+|..+.. +.. +....-+.++
T Consensus 182 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~gi~vd 260 (410)
T 3ef6_A 182 VLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQ-LEQVMASDGRSFVADSALICVGAEPADQLARQAGLACDRGVIVD 260 (410)
T ss_dssp HHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSS-CCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBSSSEECC
T ss_pred hcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCc-EEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccCCeEEEc
Confidence 0123567778888888999999 999999987553 567889999999999999999976643 211 1101124445
Q ss_pred CCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 263 GSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 263 ~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
..+....++|+++||.+...++. |. -...|..+|..+|..|.
T Consensus 261 ~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 261 HCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp TTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHc
Confidence 55555678999999998876664 32 14788899998888875
No 134
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.21 E-value=2.6e-11 Score=120.16 Aligned_cols=167 Identities=13% Similarity=0.007 Sum_probs=86.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC--CCCcCcHHH-HHhc-CCchhhhhhcccceEEeCCCCCeee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT--NNYGVWEDE-FRDL-GLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~--~~~g~~~~~-l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
..|||+||||||+|+++|+.|++.|++|+|||+....+ .++|+.+.. +-.. ....... ......+..... ...+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~-~~~~~g~~~~~~-~~~~ 102 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFS-KSIGFGWKYADP-IFNW 102 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHH-HHGGGTBCCCCC-EECH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHH-HHHhCCcccCCC-ccCH
Confidence 46999999999999999999999999999999953322 122222111 0000 0000000 000000000000 0000
Q ss_pred cCCcee--ecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEec-CCeEEecCEEEEccCCCCcccccccCce-
Q 017240 182 GRAYGR--VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACE-HDMIVPCRLATVASGAASGKLLEYEEWS- 257 (375)
Q Consensus 182 ~~~~~~--v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~-~g~~i~a~~vI~A~G~~s~~~~~~~~~~- 257 (375)
...... -....+...+.+.+.+.|++++...+..+.. . .|.+. ++.++.+|.+|+|+|+.+.......+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~---~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 177 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--H---TLELSVTGERISAEKILIATGAKIVSNSAIKGSDL 177 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--T---EEEETTTCCEEEEEEEEECCCEEECCC--CBTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--C---EEEEecCCeEEEeCEEEEccCCCcccCCCCCCccc
Confidence 000000 0012344555666677899998556665542 2 45554 6678999999999997544121221111
Q ss_pred eeecC--CCCCccCCCEEEEccCC
Q 017240 258 YIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.+... ..+...++++++||.+.
T Consensus 178 ~~~~~~~~~~~~~~~~v~ViGgG~ 201 (484)
T 3o0h_A 178 CLTSNEIFDLEKLPKSIVIVGGGY 201 (484)
T ss_dssp SBCTTTGGGCSSCCSEEEEECCSH
T ss_pred cccHHHHHhHHhcCCcEEEECcCH
Confidence 11111 11234477899999764
No 135
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.21 E-value=1.3e-10 Score=112.74 Aligned_cols=151 Identities=19% Similarity=0.234 Sum_probs=113.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR------------------------------------------ 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc------------------------------------------
Confidence 57999999999999999999999999999987532210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---cc-Cceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YE-EWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~-~~~~~p~ 261 (375)
.....+.+.+.+.+++.||+++ ++.|+++. ++ .|++.+|+++.+|.||+|+|..+.. +.. .. ... +.+
T Consensus 184 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~V 257 (408)
T 2gqw_A 184 AAPATLADFVARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFV 257 (408)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EEC
T ss_pred ccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEE
Confidence 0023466777888888999999 99999998 33 6777888899999999999976543 211 11 112 444
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~~ 306 (375)
+..+....++|+++||.+...++.+|. -...|..+|..+|..|..
T Consensus 258 d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 258 DAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp CTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 544555567999999999887766553 356788999999988863
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.21 E-value=7.2e-11 Score=115.94 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=114.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|..|+.+|..|++.|.+|+++++........
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------------------------------
Confidence 579999999999999999999999999999875332110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c----cccCceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L----EYEEWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~----~~~~~~~~p~ 261 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++...++ .+.|.++++ ++.+|.||+|+|..+... . .......+.+
T Consensus 187 ~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~v 263 (452)
T 3oc4_A 187 F-DKEMVAEVQKSLEKQAVIFHFEETVLGIEETAN-GIVLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAV 263 (452)
T ss_dssp C-CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSS-CEEEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCC
T ss_pred C-CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCC-eEEEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEE
Confidence 1 13567788888888999999 999999986655 457888777 899999999999765432 1 1222344555
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+...++.+|. -...|..+|..+|..|.
T Consensus 264 d~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 264 DAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp CTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred CcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 555555678999999998766543332 34678888888877664
No 137
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.21 E-value=6.2e-11 Score=115.95 Aligned_cols=150 Identities=15% Similarity=0.189 Sum_probs=111.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||||+.|+.+|..+++.|.+|+|+|+.......+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~----------------------------------------- 186 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM----------------------------------------- 186 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS-----------------------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc-----------------------------------------
Confidence 479999999999999999999999999999875433211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-c-----cccCceeee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-L-----EYEEWSYIP 260 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~-----~~~~~~~~p 260 (375)
..++.+.+.+.+++.||+++ ++.|+.++.. .|++++|+++.+|.||+|+|..+... . ...+...+.
T Consensus 187 --d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~-----~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~ 259 (437)
T 4eqs_A 187 --DADMNQPILDELDKREIPYRLNEEINAINGN-----EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIP 259 (437)
T ss_dssp --CGGGGHHHHHHHHHTTCCEEESCCEEEEETT-----EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEE
T ss_pred --cchhHHHHHHHhhccceEEEeccEEEEecCC-----eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEe
Confidence 01245566777788999999 9999887532 57788899999999999999654321 1 123344566
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
++..+....++|+++||.+...++.+|. -...|.++|..+|+.|.
T Consensus 260 vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 260 VNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp CCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 6666666678999999998776655442 23677888888888875
No 138
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.20 E-value=4.2e-11 Score=119.93 Aligned_cols=169 Identities=20% Similarity=0.152 Sum_probs=91.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC--------C---CCCcCcHH-HHHhcC-CchhhhhhcccceEEe
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF--------T---NNYGVWED-EFRDLG-LEGCIEHVWRDTVVYI 173 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~--------~---~~~g~~~~-~l~~~g-~~~~~~~~~~~~~~~~ 173 (375)
+|||+||||||+|+++|..+++.|.+|+|||+..+. + -++|+.+. .|-... +............+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 599999999999999999999999999999976532 2 13454331 111100 0000000000000111
Q ss_pred CCCCCeeecCCce-eecH-----HHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEec----CCeEEecCEEEEcc
Q 017240 174 DEDEPILIGRAYG-RVSR-----HLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACE----HDMIVPCRLATVAS 243 (375)
Q Consensus 174 ~~~~~~~~~~~~~-~v~~-----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~----~g~~i~a~~vI~A~ 243 (375)
+. ....+. .+.+ ..+.......+++.||+++......+..+ .+.|... ++++++++.+|+||
T Consensus 122 ~~-----~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~---~v~V~~~~~~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DN-----LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKN---TVSYYLKGDLSKEETVTGKYILIAT 193 (542)
T ss_dssp EE-----EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETT---EEEEEEC--CCCEEEEEEEEEEECC
T ss_pred Cc-----ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCC---cceEeecccCCceEEEeeeeEEecc
Confidence 00 000000 0100 12333444556778999985554444322 4455443 33679999999999
Q ss_pred CCCCccccc--ccCceeee--cCCCCCccCCCEEEEccCCCCCC
Q 017240 244 GAASGKLLE--YEEWSYIP--VGGSLPNTEQRNLAFGAAASMVH 283 (375)
Q Consensus 244 G~~s~~~~~--~~~~~~~p--~~~~~~~~~~~v~liGdaa~~~~ 283 (375)
|+.+..+.. ..+..++. ....++..++++++||.+..+++
T Consensus 194 Gs~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE 237 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALE 237 (542)
T ss_dssp CEEECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHH
T ss_pred CCCCCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHH
Confidence 976644321 11111111 11334567899999998864443
No 139
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.20 E-value=8.8e-12 Score=124.12 Aligned_cols=95 Identities=11% Similarity=-0.024 Sum_probs=63.8
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCC-------ceEEEEecCC-----eEEecCEEEEccCCCCccc--c
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTS-------GHRLVACEHD-----MIVPCRLATVASGAASGKL--L 251 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~-------~~~~V~~~~g-----~~i~a~~vI~A~G~~s~~~--~ 251 (375)
...+.++.++|...+++.+..+. +++|+++...+. +.+.|++.++ .++.|+.||+|+|..+..+ .
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~ 220 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGL 220 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTS
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCC
Confidence 36788999999999998888888 999999986542 1478887653 4789999999999543222 1
Q ss_pred cccCceeeecC--------CCCCccCCCEEEEccCCCC
Q 017240 252 EYEEWSYIPVG--------GSLPNTEQRNLAFGAAASM 281 (375)
Q Consensus 252 ~~~~~~~~p~~--------~~~~~~~~~v~liGdaa~~ 281 (375)
+..+..+.... ......+++|++||.++++
T Consensus 221 ~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA 258 (501)
T 4b63_A 221 PQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSA 258 (501)
T ss_dssp CCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHH
T ss_pred CCCcceeeccccccchhhccccccCCcEEEEECCcHHH
Confidence 11111111100 1123567899999988643
No 140
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.20 E-value=2e-11 Score=120.72 Aligned_cols=160 Identities=18% Similarity=0.171 Sum_probs=88.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHH--HHHhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWED--EFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~--~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.+||+||||||+|+++|+.|++.|++|+|||+....+.. .|+.+. .+........+........+.....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~----- 79 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD----- 79 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC-----
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC-----
Confidence 489999999999999999999999999999996544321 111110 0110000000000000000100000
Q ss_pred cCCceeecH-----------HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eE------EecCEEEE
Q 017240 182 GRAYGRVSR-----------HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MI------VPCRLATV 241 (375)
Q Consensus 182 ~~~~~~v~~-----------~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~------i~a~~vI~ 241 (375)
..++. ..+...+.+.+++.|++++ ++.+. . +.+ .+.|.+.+| .+ +.+|.||+
T Consensus 80 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~-~v~V~~~~G~~~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 80 ----IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-E--DET-KIRVTPVDGLEGTVKEDHILDVKNIIV 151 (478)
T ss_dssp ----EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-S--SSS-EEEEECCTTCTTCCSSCEEEEEEEEEE
T ss_pred ----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cCC-eEEEEecCCCcccccccceEEeCEEEE
Confidence 01111 1233445566677899998 66554 1 333 677777766 46 99999999
Q ss_pred ccCCCCcccccc--cCceeeecC--CCCCccCCCEEEEccCC
Q 017240 242 ASGAASGKLLEY--EEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 242 A~G~~s~~~~~~--~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
|||+++..+... .+..++... ..+...++++++||.+.
T Consensus 152 AtGs~p~~~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~ 193 (478)
T 1v59_A 152 ATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGI 193 (478)
T ss_dssp CCCEEECCCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCSH
T ss_pred CcCCCCCCCCCCCCCCceEEcHHHHHhhhccCceEEEECCCH
Confidence 999876433221 111122110 11223468899999764
No 141
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.20 E-value=1.9e-10 Score=114.35 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=111.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--------------CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEe
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--------------GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYI 173 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--------------G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~ 173 (375)
..++|||||++|+.+|.+|+.. ..+|+|||..+.....+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~--------------------------- 270 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMF--------------------------- 270 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTS---------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCC---------------------------
Confidence 3699999999999999999764 36799999876433221
Q ss_pred CCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC----eEEecCEEEEccCCCCc
Q 017240 174 DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD----MIVPCRLATVASGAASG 248 (375)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g----~~i~a~~vI~A~G~~s~ 248 (375)
...+.+.+.+.+++.||+++ ++.|++++.+.. ...+...|| +++.+|.||.|+|..++
T Consensus 271 ----------------~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~-~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 271 ----------------EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQL-LAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp ----------------CHHHHHHHHHHHHHTTCEEETTEEEEEECSSEE-EEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred ----------------CHHHHHHHHHHHHhcceeeecCceEEEEeCCce-EEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 23577788888899999999 999999864421 233344555 46999999999997654
Q ss_pred ccc---------cccCceeeecCCCCCc-cCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHH
Q 017240 249 KLL---------EYEEWSYIPVGGSLPN-TEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYI 307 (375)
Q Consensus 249 ~~~---------~~~~~~~~p~~~~~~~-~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~ 307 (375)
... .......+.++..+.. ..++|+++||.+..-.|.++ ..|.++|..+|+.|...
T Consensus 334 ~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a---~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 334 PVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTA---QVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCH---HHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCch---HHHHHHHHHHHHHHHHH
Confidence 221 1122344666666655 35799999999988777777 46889999999998764
No 142
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.20 E-value=1.1e-10 Score=115.39 Aligned_cols=141 Identities=21% Similarity=0.179 Sum_probs=82.9
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC----CcC---------cHHHHHh-----cCC--chhh------
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN----YGV---------WEDEFRD-----LGL--EGCI------ 162 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~----~g~---------~~~~l~~-----~g~--~~~~------ 162 (375)
||+|||||++|+++|+.|++.|.+|+||||....+.. -|+ +...+.+ .++ +..+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 8999999999999999999999999999998322211 011 1111111 011 0000
Q ss_pred ----hhhcccceEEeCCC----CCeeecC--CceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-C
Q 017240 163 ----EHVWRDTVVYIDED----EPILIGR--AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H 230 (375)
Q Consensus 163 ----~~~~~~~~~~~~~~----~~~~~~~--~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~ 230 (375)
........+.++.. ......+ ..+......+.+.|.+.+++.|++++ ++.| ++..+++....|... +
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 00000000111110 0000000 00123466888999999988899999 9999 998766534445442 2
Q ss_pred CeEEecCEEEEccCCCCccc
Q 017240 231 DMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 231 g~~i~a~~vI~A~G~~s~~~ 250 (375)
+.++.+|.||+|||+++..+
T Consensus 160 ~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp EEECCCSEEEECCCCCGGGS
T ss_pred CCeEEeeeEEECCCCCcccC
Confidence 23688999999999988654
No 143
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.20 E-value=8.3e-11 Score=119.52 Aligned_cols=145 Identities=16% Similarity=0.156 Sum_probs=87.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCC-----CCcC---------cHH----HHHhc-CC--chhh
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTN-----NYGV---------WED----EFRDL-GL--EGCI 162 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~-----~~g~---------~~~----~l~~~-g~--~~~~ 162 (375)
..+||||||||++|+++|+.|++.| .+|+||||...... ..|+ |.. .+..- ++ ...+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3589999999999999999999999 99999999754211 1111 111 11110 11 0100
Q ss_pred hhh----------cccceEEeCCCC-C-e---ee-cCCc------eeecHHHHHHHHHHHHHHCC-ceEE-EEEEEEEEE
Q 017240 163 EHV----------WRDTVVYIDEDE-P-I---LI-GRAY------GRVSRHLLHEELLRRCVESG-VSYL-SSKVESITE 218 (375)
Q Consensus 163 ~~~----------~~~~~~~~~~~~-~-~---~~-~~~~------~~v~~~~l~~~L~~~~~~~g-v~i~-~~~v~~i~~ 218 (375)
... .....+.++... . . .. +... .......+...|.+.+.+.| ++++ ++.|+++..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 000 000001111000 0 0 00 0000 01124678899999998888 9999 999999987
Q ss_pred cCCceEEEEe---cCCe--EEecCEEEEccCCCCccc
Q 017240 219 STSGHRLVAC---EHDM--IVPCRLATVASGAASGKL 250 (375)
Q Consensus 219 ~~~~~~~V~~---~~g~--~i~a~~vI~A~G~~s~~~ 250 (375)
+++.+..|.. .+|+ ++.|+.||+|||+++...
T Consensus 164 ~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 164 DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 7654444432 5675 799999999999987654
No 144
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.20 E-value=1.5e-10 Score=117.43 Aligned_cols=152 Identities=15% Similarity=0.160 Sum_probs=114.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||+.|+.+|..|++.|.+|+++++.......+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPI----------------------------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccC-----------------------------------------
Confidence 479999999999999999999999999999875322111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-cc-----cccCceeee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LL-----EYEEWSYIP 260 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~-----~~~~~~~~p 260 (375)
...+.+.+.+.+++.||+++ ++.|+++..+++ .|++.+|+++.+|.||+|+|..+.. +. ...+...+.
T Consensus 227 --~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~ 301 (588)
T 3ics_A 227 --DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIK 301 (588)
T ss_dssp --CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBC
T ss_pred --CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEE
Confidence 12467777888888999999 999999976544 4777888899999999999976543 11 122334455
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
++..+....++|+++||.+...++.+|. -...|..+|..+|+.|.
T Consensus 302 vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 302 VNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIH 351 (588)
T ss_dssp CCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred ECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhc
Confidence 5555556678999999998766555442 24678888888888775
No 145
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.20 E-value=4.2e-10 Score=111.71 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=110.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+++.+.....
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------------------------------ 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 57999999999999999999999999999987543211
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec--CC--eEEecCEEEEccCCCCcccc--------ccc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HD--MIVPCRLATVASGAASGKLL--------EYE 254 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~--~g--~~i~a~~vI~A~G~~s~~~~--------~~~ 254 (375)
. ...+.+.+.+.+++. |+++ ++.|+.+..+++ .+.|++. +| .++.+|.||+|+|..+.... ...
T Consensus 213 ~-d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~ 289 (492)
T 3ic9_A 213 Q-DEEMKRYAEKTFNEE-FYFDAKARVISTIEKED-AVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELD 289 (492)
T ss_dssp C-CHHHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBC
T ss_pred C-CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEEC
Confidence 1 124666777777777 9999 999999988766 4556664 66 68999999999997654321 112
Q ss_pred CceeeecC-CCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 255 EWSYIPVG-GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 255 ~~~~~p~~-~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
+...+.++ ..+....++|+++||.+....- ...|..+|..+|..|..
T Consensus 290 ~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~-----~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 290 KKNSPLFDELTLQTSVDHIFVAGDANNTLTL-----LHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TTCCBCCCTTTCBCSSTTEEECGGGGTSSCS-----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEeECcccccCCCCCEEEEEecCCCCcc-----HHHHHHHHHHHHHHHcC
Confidence 33444445 4455566899999999865332 36889999999988875
No 146
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.20 E-value=3.2e-10 Score=111.99 Aligned_cols=150 Identities=20% Similarity=0.161 Sum_probs=111.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++.......+
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 219 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAV----------------------------------------- 219 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCccc-----------------------------------------
Confidence 579999999999999999999999999999875332111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC---eEEecCEEEEccCCCCccc---c-----cccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD---MIVPCRLATVASGAASGKL---L-----EYEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g---~~i~a~~vI~A~G~~s~~~---~-----~~~~ 255 (375)
...+.+.+.+.+++.||+++ ++.|+++..+++ .+.|++.++ .++.+|.||+|+|..+... . ...+
T Consensus 220 --~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~ 296 (476)
T 3lad_A 220 --DEQVAKEAQKILTKQGLKILLGARVTGTEVKNK-QVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDE 296 (476)
T ss_dssp --CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSS-CEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCT
T ss_pred --CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC-EEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccC
Confidence 12467777888888999999 999999988766 456666543 6799999999999654331 1 1122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
...+.++..+....++|+++||.+..... ...|..++..+++.|..
T Consensus 297 ~G~i~vd~~~~t~~~~Iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 297 RGFIYVDDYCATSVPGVYAIGDVVRGAML-----AHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGSSSCCC-----HHHHHHHHHHHHHHHHH
T ss_pred CCCEeeCCCcccCCCCEEEEEccCCCccc-----HHHHHHHHHHHHHHhcC
Confidence 33455555555566799999999854332 36788999999888863
No 147
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.20 E-value=1.3e-11 Score=123.36 Aligned_cols=169 Identities=22% Similarity=0.158 Sum_probs=87.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC--------CCC---CCcCcHHH-HHhc-CCchhhhhhcccceEE
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP--------FTN---NYGVWEDE-FRDL-GLEGCIEHVWRDTVVY 172 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~--------~~~---~~g~~~~~-l~~~-g~~~~~~~~~~~~~~~ 172 (375)
..|||+||||||+|+++|+.|++.|++|+|||+..+ .+. ++|+.+.. +... ........ .....+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~-~~~~g~~ 109 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQD-SRNYGWK 109 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHH-HHhcCcc
Confidence 359999999999999999999999999999998642 111 11221111 0000 00000000 0000000
Q ss_pred eCCCCCeeecCCceeec--HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCe--EEecCEEEEccCCCCc
Q 017240 173 IDEDEPILIGRAYGRVS--RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDM--IVPCRLATVASGAASG 248 (375)
Q Consensus 173 ~~~~~~~~~~~~~~~v~--~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~--~i~a~~vI~A~G~~s~ 248 (375)
........+.......+ -..+...+...++..||+++...+..+... .+.|.+.+|. ++.+|.||+|||+.+.
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~---~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPH---RIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT---EEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC---EEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 00000000000000000 012223333455668999995556655432 5677776664 7999999999996543
Q ss_pred ccccccCc--eeeec--CCCCCccCCCEEEEccCC
Q 017240 249 KLLEYEEW--SYIPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 249 ~~~~~~~~--~~~p~--~~~~~~~~~~v~liGdaa 279 (375)
.+ +..+. .++.. ...+...++++++||.+.
T Consensus 187 ~p-~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ 220 (519)
T 3qfa_A 187 YL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASY 220 (519)
T ss_dssp CC-CCTTHHHHCBCHHHHTTCSSCCCSEEEECCSH
T ss_pred CC-CCCCccCceEcHHHHhhhhhcCCeEEEECCcH
Confidence 32 22211 11110 122345567899999874
No 148
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.20 E-value=4.2e-10 Score=104.93 Aligned_cols=150 Identities=16% Similarity=0.156 Sum_probs=106.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++.....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-------------------------------------------- 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-------------------------------------------- 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC--------------------------------------------
Confidence 479999999999999999999999999999764221
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEccCCCCcc-ccc-----ccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGK-LLE-----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~-~~~-----~~~ 255 (375)
. ...+.+.+.+.||+++ ++.|+++..+++....|.+. +|+ ++.+|.||+|+|..+.. +.. ..+
T Consensus 192 ~-----~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~ 266 (319)
T 3cty_A 192 C-----ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDE 266 (319)
T ss_dssp S-----CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCT
T ss_pred C-----CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccC
Confidence 0 0123444557899999 99999998765423345553 563 69999999999965542 211 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
...+.++..+....++|+++||.+... +. ....|+.+|..+|..|...+.+
T Consensus 267 ~g~i~vd~~~~t~~~~vya~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 267 RGYIVVDSRQRTSVPGVYAAGDVTSGN-FA---QIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTBTTC-CC---CHHHHHHHHHHHHHHHHHHHTC
T ss_pred CccEeCCCCCccCCCCEEEeecccCcc-hh---hHHHHHHHHHHHHHHHHHHhhc
Confidence 233444444445567899999998752 11 2477899999999999988864
No 149
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.20 E-value=1.2e-11 Score=122.18 Aligned_cols=165 Identities=17% Similarity=0.193 Sum_probs=87.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHHH--HHhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWEDE--FRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
++||+||||||+|+++|+.|++.|++|+|||+....+. ++|+.+.. +....+............+....... .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~--~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT--M 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE--E
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc--c
Confidence 48999999999999999999999999999999855432 12221110 00000000000000000000000000 0
Q ss_pred cCCce-eec-----HHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCccc--
Q 017240 182 GRAYG-RVS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKL-- 250 (375)
Q Consensus 182 ~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~-- 250 (375)
.+. ... ...+...+.+.+++.|++++ ++ +..++ .+ .+.|.+.+| .++.+|.+|+|||+.+..+
T Consensus 80 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~--~~-~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~ 153 (468)
T 2qae_A 80 --DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFET--AH-SIRVNGLDGKQEMLETKKTIIATGSEPTELPF 153 (468)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEEE--TT-EEEEEETTSCEEEEEEEEEEECCCEEECCBTT
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--CC-EEEEEecCCceEEEEcCEEEECCCCCcCCCCC
Confidence 000 000 01233344566667899999 55 44443 33 577877777 7899999999999754332
Q ss_pred ccccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 251 LEYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 251 ~~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.......++... ..+...++++++||.+.
T Consensus 154 ~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~ 184 (468)
T 2qae_A 154 LPFDEKVVLSSTGALALPRVPKTMVVIGGGV 184 (468)
T ss_dssp BCCCSSSEECHHHHHTCSSCCSEEEEECCSH
T ss_pred CCCCcCceechHHHhhcccCCceEEEECCCH
Confidence 111111122211 11223467899999764
No 150
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.20 E-value=5.9e-11 Score=116.96 Aligned_cols=165 Identities=19% Similarity=0.186 Sum_probs=89.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHH--HHHhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWED--EFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~--~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.+||+||||||+|+++|+.|++.|++|+|||+. ..+. +.|+.+. .+...++...+........+. .. ....+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~-~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GE-VTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-EC-CEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CC-CccCH
Confidence 489999999999999999999999999999997 3321 1121111 111111101110000000010 00 00000
Q ss_pred cCCcee--ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCcccc--ccc
Q 017240 182 GRAYGR--VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLL--EYE 254 (375)
Q Consensus 182 ~~~~~~--v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~--~~~ 254 (375)
...... -....+...+.+.+++.|++++ ++.+. + +.+ .+.|.+.+| .++.+|.||+|||+.+..+. ...
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~~-~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~ 155 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DAN-TLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLS 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SSS-EEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCC-eEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCC
Confidence 000000 0012344556677777899999 66543 2 333 677888777 78999999999998764331 111
Q ss_pred CceeeecC--CCCCccCCCEEEEccCC
Q 017240 255 EWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 255 ~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.. ++... ..+...++++++||.+.
T Consensus 156 ~~-~~~~~~~~~~~~~~~~vvViGgG~ 181 (464)
T 2a8x_A 156 AN-VVTYEEQILSRELPKSIIIAGAGA 181 (464)
T ss_dssp TT-EECHHHHHTCSSCCSEEEEECCSH
T ss_pred ce-EEecHHHhhccccCCeEEEECCcH
Confidence 11 22211 11223467899999764
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.19 E-value=4.3e-11 Score=118.09 Aligned_cols=165 Identities=18% Similarity=0.221 Sum_probs=89.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC---cCcHH-HH-HhcCCchhhhhhcccceEEeCCCCCee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GVWED-EF-RDLGLEGCIEHVWRDTVVYIDEDEPIL 180 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~---g~~~~-~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
..+||+||||||+|+++|+.|++.|++|+|||++...+..+ |+.+. .+ ....+...+............. ..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~---~~ 81 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSN---VE 81 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESC---EE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCC---Cc
Confidence 45899999999999999999999999999999986544221 22111 00 0000000000000000000000 00
Q ss_pred ecCCce-eec-----HHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCcccc
Q 017240 181 IGRAYG-RVS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLL 251 (375)
Q Consensus 181 ~~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~ 251 (375)
. .+. .+. ...+...+.+.+++.|++++ ++.+ .+ +.+ .+.|.+.+| .++.+|.||+|||+.+..+.
T Consensus 82 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~-~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 82 I--DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FV--SPS-EISVDTIEGENTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp E--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-EE--ETT-EEEECCSSSCCEEEECSEEEECCCEEECCBT
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cCC-EEEEEeCCCceEEEEcCEEEECCCCCCCCCC
Confidence 0 000 000 11244445566667899998 5544 33 233 567777777 78999999999997654331
Q ss_pred --cccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 252 --EYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 252 --~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
......++... ..+...++++++||.+.
T Consensus 156 ~~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ 187 (470)
T 1dxl_A 156 GVTIDEKKIVSSTGALALSEIPKKLVVIGAGY 187 (470)
T ss_dssp TBCCCSSSEECHHHHTTCSSCCSEEEESCCSH
T ss_pred CCCCCcccEEeHHHhhhhhhcCCeEEEECCCH
Confidence 11111222211 11223467899998764
No 152
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.19 E-value=1.9e-11 Score=121.07 Aligned_cols=162 Identities=20% Similarity=0.215 Sum_probs=87.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHH--HHHhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWED--EFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~--~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
++||+|||||++|+++|+.|++.|++|+|||+....+. +.|+.+. .+....+...+... ....+.+....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~-~~~gi~~~~~~---- 80 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHL-AANGIKYPEPE---- 80 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCCC----
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHH-HhCCcccCCCc----
Confidence 48999999999999999999999999999999654431 1122111 01100000000000 00000000000
Q ss_pred cCCce-eec-----HHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC------------eEEecCEEEEc
Q 017240 182 GRAYG-RVS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD------------MIVPCRLATVA 242 (375)
Q Consensus 182 ~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g------------~~i~a~~vI~A 242 (375)
..+. .+. ...+...+.+.+++.|++++ ++.+. + +++ .+.|.+.+| .++++|.||+|
T Consensus 81 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~-~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViA 155 (482)
T 1ojt_A 81 -LDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DPH-HLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIA 155 (482)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ETT-EEEEEEEEEEETTEEEEEEEEEEEEEEEEEEC
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cCC-EEEEEecCCcccccccccCcceEEEcCEEEEC
Confidence 0000 000 11233345566677899998 65443 2 333 566665555 67999999999
Q ss_pred cCCCCcccc--cccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 243 SGAASGKLL--EYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 243 ~G~~s~~~~--~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
||+++..+. +... .++... ..+...++++++||.+.
T Consensus 156 tGs~p~~~~~i~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ 195 (482)
T 1ojt_A 156 AGSRVTKLPFIPEDP-RIIDSSGALALKEVPGKLLIIGGGI 195 (482)
T ss_dssp CCEEECCCSSCCCCT-TEECHHHHTTCCCCCSEEEEESCSH
T ss_pred CCCCCCCCCCCCccC-cEEcHHHHhcccccCCeEEEECCCH
Confidence 998764432 2111 122211 11233477999999764
No 153
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.19 E-value=4.3e-10 Score=110.84 Aligned_cols=147 Identities=17% Similarity=0.198 Sum_probs=109.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+++|+...... +
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~----------------------------------------- 214 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-E----------------------------------------- 214 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-S-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-C-----------------------------------------
Confidence 5799999999999999999999999999998753211 1
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc---cc-----ccCcee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL---LE-----YEEWSY 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~---~~-----~~~~~~ 258 (375)
...+.+.+.+.+++.|++++ ++.|+++..+++ .+.|++++ .++.+|.||+|+|.++... .. ......
T Consensus 215 --~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~~-~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~ 290 (467)
T 1zk7_A 215 --DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDG-EFVLTTTH-GELRADKLLVATGRTPNTRSLALDAAGVTVNAQGA 290 (467)
T ss_dssp --CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETT-EEEEEETT-EEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSC
T ss_pred --CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEECC-cEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCC
Confidence 12467778888888999999 999999987655 56677764 5899999999999775432 11 122233
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
+.++..+....++|+++||.+..... ...|..+|..+|..+.
T Consensus 291 i~vd~~~~t~~~~iya~GD~~~~~~~-----~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 291 IVIDQGMRTSNPNIYAAGDCTDQPQF-----VYVAAAAGTRAAINMT 332 (467)
T ss_dssp BCCCTTCBCSSTTEEECSTTBSSCCC-----HHHHHHHHHHHHHHHT
T ss_pred EEECCCcccCCCCEEEEeccCCCccc-----HHHHHHHHHHHHHHHc
Confidence 44444445556799999999875322 3678889998888775
No 154
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.19 E-value=6.8e-11 Score=116.83 Aligned_cols=165 Identities=14% Similarity=0.173 Sum_probs=88.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHH-HH-HhcCCchhhh--hhcccceEEeCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWED-EF-RDLGLEGCIE--HVWRDTVVYIDEDEP 178 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~-~l-~~~g~~~~~~--~~~~~~~~~~~~~~~ 178 (375)
..+||+||||||+|+++|..|++.|++|+|||++...+.. +|+.+. .+ .......... ...... .....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g-~~~~~--- 80 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRG-IEMSE--- 80 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTT-EEESC---
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCc-cccCC---
Confidence 3589999999999999999999999999999998654422 122111 00 0000000000 000000 00000
Q ss_pred eeecCCce-eec-H----HHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecC-C-eEEecCEEEEccCCCCccc
Q 017240 179 ILIGRAYG-RVS-R----HLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEH-D-MIVPCRLATVASGAASGKL 250 (375)
Q Consensus 179 ~~~~~~~~-~v~-~----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~-g-~~i~a~~vI~A~G~~s~~~ 250 (375)
... .+. .+. . ..+...+.+.+++.|++++...+..++ .+ .+.|.+.+ + .++.+|.||+|||+.+..+
T Consensus 81 ~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~-~~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 81 VRL--NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITG--KN-QVTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp EEE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEE--TT-EEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred Ccc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEec--CC-EEEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 000 000 000 1 123333456667789999833344442 33 57787776 4 5799999999999765333
Q ss_pred c--cccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 251 L--EYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 251 ~--~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
. ......++... ..+...++++++||.+.
T Consensus 156 ~i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG~ 188 (474)
T 1zmd_A 156 PGITIDEDTIVSSTGALSLKKVPEKMVVIGAGV 188 (474)
T ss_dssp TTCCCCSSSEECHHHHTTCSSCCSEEEEECCSH
T ss_pred CCCCCCcCcEEcHHHHhhccccCceEEEECCCH
Confidence 1 11111122211 11223467899999764
No 155
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.19 E-value=6.1e-11 Score=116.97 Aligned_cols=163 Identities=18% Similarity=0.199 Sum_probs=85.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHHH-HHhcCCchhhhhhcccceEE--eCCCCCee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWEDE-FRDLGLEGCIEHVWRDTVVY--IDEDEPIL 180 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~~-l~~~g~~~~~~~~~~~~~~~--~~~~~~~~ 180 (375)
.+||+|||||++|+++|+.|++.|++|+|||++. .+. +.|+.+.. +-.. ............+ +.....
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~---~~~~~~~~~~~~~~g~~~~~~-- 77 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRA---AHIAHLRRESPFDGGIAATVP-- 77 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHH---HHHHHHHHCCTTTTTSCCCCC--
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHH---HHHHHHHhhhhhcCCccCCCC--
Confidence 4899999999999999999999999999999883 331 12221110 0000 0000000000000 000000
Q ss_pred ecCCcee-ec-HHHHHHHH-----HHHHHHC-CceEEEEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCccc
Q 017240 181 IGRAYGR-VS-RHLLHEEL-----LRRCVES-GVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKL 250 (375)
Q Consensus 181 ~~~~~~~-v~-~~~l~~~L-----~~~~~~~-gv~i~~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~ 250 (375)
...+.. +. ...+...+ .+.+++. |++++...++.++. + .+.|.+.+| .++.+|.+|+|||+.+..+
T Consensus 78 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~--~-~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 153 (467)
T 1zk7_A 78 -TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDD--Q-SLTVRLNEGGERVVMFDRCLVATGASPAVP 153 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEET--T-EEEEEETTSSEEEEECSEEEECCCEEECCC
T ss_pred -ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccC--C-EEEEEeCCCceEEEEeCEEEEeCCCCCCCC
Confidence 000000 00 11122222 2344556 99998445766642 2 577888777 7899999999999653322
Q ss_pred --ccccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 251 --LEYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 251 --~~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.......++... ..+...++++++||.+.
T Consensus 154 ~i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG~ 186 (467)
T 1zk7_A 154 PIPGLKESPYWTSTEALASDTIPERLAVIGSSV 186 (467)
T ss_dssp CCTTTTTSCCBCHHHHHHCSSCCSEEEEECCSH
T ss_pred CCCCCCcCceecHHHHhcccccCCEEEEECCCH
Confidence 111111111100 01123467899999775
No 156
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.19 E-value=1.2e-11 Score=122.71 Aligned_cols=170 Identities=19% Similarity=0.139 Sum_probs=86.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC--------CCC---CCcCcHHH-HHh-cCCchhhhhhcccceEE
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP--------FTN---NYGVWEDE-FRD-LGLEGCIEHVWRDTVVY 172 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~--------~~~---~~g~~~~~-l~~-~g~~~~~~~~~~~~~~~ 172 (375)
.+|||+||||||+|+++|+.|++.|++|+|||+..+ .+. ++|+.+.. +.. ......... .....+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~-~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRD-AHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHH-HHhcCcc
Confidence 469999999999999999999999999999997432 221 12221111 000 000000000 0000000
Q ss_pred eCCCCCeeecCCceeec--HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCc
Q 017240 173 IDEDEPILIGRAYGRVS--RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASG 248 (375)
Q Consensus 173 ~~~~~~~~~~~~~~~v~--~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~ 248 (375)
........+.......+ -..+...+...+.+.|++++...+..+. .+ .+.|.+.+| .++.+|.||+|||+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~--~~-~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVD--EH-TVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESS--SS-EEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc--CC-eEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 00000000000000000 0122233444556689999855555443 22 567777776 57999999999996543
Q ss_pred ccccccCc--eeee--cCCCCCccCCCEEEEccCC
Q 017240 249 KLLEYEEW--SYIP--VGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 249 ~~~~~~~~--~~~p--~~~~~~~~~~~v~liGdaa 279 (375)
.+....+. ..+. ....+...++++++||.+.
T Consensus 161 ~p~~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ 195 (488)
T 3dgz_A 161 YPTQVKGALEYGITSDDIFWLKESPGKTLVVGASY 195 (488)
T ss_dssp CCSSCBTHHHHCBCHHHHTTCSSCCCSEEEECCSH
T ss_pred CCCCCCCcccccCcHHHHHhhhhcCCeEEEECCCH
Confidence 32112111 0111 0112334567899999864
No 157
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.19 E-value=5.2e-10 Score=104.70 Aligned_cols=150 Identities=16% Similarity=0.089 Sum_probs=107.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++......
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcCCceEEEEecC-----CeEEecCEEEEccCCCCccc-cc----ccC
Q 017240 188 VSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLVACEH-----DMIVPCRLATVASGAASGKL-LE----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~V~~~~-----g~~i~a~~vI~A~G~~s~~~-~~----~~~ 255 (375)
...+.+.+.+. ||+++ ++.|+++..++++...|++.+ +.++.+|.||+|+|..+... .. ..+
T Consensus 211 ------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~ 284 (338)
T 3itj_A 211 ------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDE 284 (338)
T ss_dssp ------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCT
T ss_pred ------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecC
Confidence 12234444444 99999 999999988765444566654 46799999999999665332 11 122
Q ss_pred ceeeec-CCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 256 WSYIPV-GGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 256 ~~~~p~-~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
...+.+ ........++|+++||.+... |. .+..|+.+|..+|..|...+++
T Consensus 285 ~G~i~v~~~~~~t~~~~vya~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 285 AGYIKTVPGSSLTSVPGFFAAGDVQDSK-YR---QAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp TSCBCCCTTSSBCSSTTEEECGGGGCSS-CC---CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEcCcccccCCCCEEEeeccCCCC-cc---ceeeehhhhHHHHHHHHHHHhc
Confidence 333332 333334567999999998732 22 2478899999999999998865
No 158
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.18 E-value=4.2e-11 Score=117.63 Aligned_cols=140 Identities=17% Similarity=0.126 Sum_probs=84.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
+||+|||||++|+++|..|++. |.+|+|||++...+... +++ .. ....
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~-~~--------------------~~~~-------- 53 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLS-AY--------------------FNHT-------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccch-hh--------------------hcCC--------
Confidence 5999999999999999999998 89999999986543111 110 00 0000
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCeEEecCEEEEccCCCCccc--ccccCceeee
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDMIVPCRLATVASGAASGKL--LEYEEWSYIP 260 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~~i~a~~vI~A~G~~s~~~--~~~~~~~~~p 260 (375)
..+...+...+.+.+.+.|++++ +++|+.++.+.+ .+.+.. .++.++.+|.+|+|||+.+..+ .......++.
T Consensus 54 --~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~-~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~ 130 (452)
T 3oc4_A 54 --INELHEARYITEEELRRQKIQLLLNREVVAMDVENQ-LIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLK 130 (452)
T ss_dssp ---------CCCCHHHHHHTTEEEECSCEEEEEETTTT-EEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEE
T ss_pred --CCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCC-EEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEE
Confidence 00001111112344566899998 999999987766 555542 2456899999999999865332 1111112222
Q ss_pred cC---C--C---CCccCCCEEEEccCC
Q 017240 261 VG---G--S---LPNTEQRNLAFGAAA 279 (375)
Q Consensus 261 ~~---~--~---~~~~~~~v~liGdaa 279 (375)
.. . . ....++++++||.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~vvViGgG~ 157 (452)
T 3oc4_A 131 YKFLSGALAAVPLLENSQTVAVIGAGP 157 (452)
T ss_dssp GGGCC----CCHHHHTCSEEEEECCSH
T ss_pred eCCHHHHHHHHHHHhcCCEEEEECCCH
Confidence 11 0 0 123467899999764
No 159
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.18 E-value=2.8e-11 Score=119.59 Aligned_cols=169 Identities=18% Similarity=0.174 Sum_probs=87.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC--Cc-------CcHH-HHHh-cCCchhhhhhcccceEEeCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YG-------VWED-EFRD-LGLEGCIEHVWRDTVVYIDE 175 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~--~g-------~~~~-~l~~-~g~~~~~~~~~~~~~~~~~~ 175 (375)
+|||+||||||+|+++|+.|++.|++|+|||++...+.. +| +.+. .+.. ...............+....
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~ 82 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGE 82 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 599999999999999999999999999999998633211 11 1110 0000 00000000000111111110
Q ss_pred CCCeeecCCceeec--HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCcccc
Q 017240 176 DEPILIGRAYGRVS--RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLL 251 (375)
Q Consensus 176 ~~~~~~~~~~~~v~--~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~ 251 (375)
. ...+.......+ ...+...+...+++.|++++...+..+ +.+ .+.|.+.+| .++.+|.||+|||+.+..+.
T Consensus 83 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~-~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~ 158 (476)
T 3lad_A 83 V-AIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLL--AGK-KVEVTAADGSSQVLDTENVILASGSKPVEIP 158 (476)
T ss_dssp C-EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEEC--STT-CEEEECTTSCEEEECCSCEEECCCEEECCCT
T ss_pred C-ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCC-EEEEEcCCCceEEEEcCEEEEcCCCCCCCCC
Confidence 0 000000000000 012333344555667999984444443 233 577777777 57999999999997543221
Q ss_pred --cccCceeeec--CCCCCccCCCEEEEccCC
Q 017240 252 --EYEEWSYIPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 252 --~~~~~~~~p~--~~~~~~~~~~v~liGdaa 279 (375)
......++.. ...+...++++++||.+.
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG~ 190 (476)
T 3lad_A 159 PAPVDQDVIVDSTGALDFQNVPGKLGVIGAGV 190 (476)
T ss_dssp TSCCCSSSEEEHHHHTSCSSCCSEEEEECCSH
T ss_pred CCCCCcccEEechhhhccccCCCeEEEECCCH
Confidence 1111112221 112234567899999764
No 160
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.17 E-value=3.9e-11 Score=113.25 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=75.8
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCcEEEECCCCCCCCCCc---------------C-----c-------HHHHHh--
Q 017240 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYG---------------V-----W-------EDEFRD-- 155 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~---~G~~V~liE~~~~~~~~~g---------------~-----~-------~~~l~~-- 155 (375)
+||+|||||++|+++|+.|++ .|++|+||||....+.... . . ...++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 599999999999999999999 9999999999864332110 0 0 000000
Q ss_pred -cCCchhhhhhcccceEEeCC-CCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCe
Q 017240 156 -LGLEGCIEHVWRDTVVYIDE-DEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM 232 (375)
Q Consensus 156 -~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~ 232 (375)
.++ ...|......... .....+....+ -..+.+.|.+ +.|++|+ +++|++|..+++ .+.|++.+|.
T Consensus 82 ~~g~----~~~~~~~~~~~~~~~~~~~~~~~~g---~~~l~~~l~~---~~g~~i~~~~~V~~i~~~~~-~~~v~~~~g~ 150 (342)
T 3qj4_A 82 AYGV----LRPLSSPIEGMVMKEGDCNFVAPQG---ISSIIKHYLK---ESGAEVYFRHRVTQINLRDD-KWEVSKQTGS 150 (342)
T ss_dssp HTTS----CEECCSCEETCCC--CCEEEECTTC---TTHHHHHHHH---HHTCEEESSCCEEEEEECSS-SEEEEESSSC
T ss_pred hCCC----eecCchhhcceeccCCccceecCCC---HHHHHHHHHH---hcCCEEEeCCEEEEEEEcCC-EEEEEECCCC
Confidence 000 0011100000000 00000000001 1234444443 3489999 999999998776 6889998887
Q ss_pred EEecCEEEEccCC
Q 017240 233 IVPCRLATVASGA 245 (375)
Q Consensus 233 ~i~a~~vI~A~G~ 245 (375)
++.+|.||+|+..
T Consensus 151 ~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 PEQFDLIVLTMPV 163 (342)
T ss_dssp CEEESEEEECSCH
T ss_pred EEEcCEEEECCCH
Confidence 7899999999974
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.16 E-value=2.6e-11 Score=119.17 Aligned_cols=161 Identities=14% Similarity=0.166 Sum_probs=88.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHH-HH-HhcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWED-EF-RDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~-~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
++||+||||||+|+++|..|++.|++|+|||+. ..+. ++|+.+. .+ ........+. ......+.+... ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~-~~~~~g~~~~~~---~~ 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAK-HSEEMGIKAENV---TI 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHH-TCGGGTEECCSC---EE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHH-HHHhcCcccCCC---cc
Confidence 489999999999999999999999999999997 3321 2222111 00 0000000000 000001111000 00
Q ss_pred cCCce-eec-H----HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC-eEEecCEEEEccCCCCccc--c
Q 017240 182 GRAYG-RVS-R----HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD-MIVPCRLATVASGAASGKL--L 251 (375)
Q Consensus 182 ~~~~~-~v~-~----~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g-~~i~a~~vI~A~G~~s~~~--~ 251 (375)
.+. .+. . ..+.+.+.+.+++.|++++ ++.+ .+ +.+ .+.|++.+| .++.+|.||+|||+.+..+ .
T Consensus 78 --~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~i--d~~-~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~ 151 (455)
T 1ebd_A 78 --DFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FV--DAN-TVRVVNGDSAQTYTFKNAIIATGSRPIELPNF 151 (455)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EE--ETT-EEEEEETTEEEEEECSEEEECCCEEECCBTTB
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ec--cCC-eEEEEeCCCcEEEEeCEEEEecCCCCCCCCCC
Confidence 000 011 1 1244455666777899999 5543 33 233 577887777 6899999999999765433 1
Q ss_pred cccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 252 EYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 252 ~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
..... ++... ..+...++++++||.+.
T Consensus 152 g~~~~-v~~~~~~~~~~~~~~~vvViGgG~ 180 (455)
T 1ebd_A 152 KFSNR-ILDSTGALNLGEVPKSLVVIGGGY 180 (455)
T ss_dssp CCCSS-EECHHHHHTCSSCCSEEEEECCSH
T ss_pred Cccce-EecHHHHhccccCCCeEEEECCCH
Confidence 11111 22211 11223467899999763
No 162
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.16 E-value=4e-11 Score=117.63 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=68.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCC-CcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~-~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
.+||+|||||++|+++|..|++. |.+|+|||+....... +++ +.. +.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~----------p~~-----------~~--------- 52 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGI----------PYV-----------VE--------- 52 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCC----------ccc-----------cC---------
Confidence 37999999999999999999998 7899999998643211 111 000 00
Q ss_pred CceeecHHHHHHHHHHHH-HHCCceEE-EEEEEEEEEcCCceEEEEecCC-eEEecCEEEEccCCCC
Q 017240 184 AYGRVSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVACEHD-MIVPCRLATVASGAAS 247 (375)
Q Consensus 184 ~~~~v~~~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g-~~i~a~~vI~A~G~~s 247 (375)
+..+...+.....+.+ ++.|++++ +++|+.++.+ ...|.+.++ .++.+|.||+|||+.+
T Consensus 53 --~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~---~~~v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 53 --GLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTG---YVRVRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp ---------------CTHHHHTTCEEETTCEEEEECSS---EEEEECSSSEEEEECSEEEECCCEEE
T ss_pred --CCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecC---CCEEEECCceEEEEcCEEEECCCCCC
Confidence 0011112222222333 56899999 8899988644 456777777 4899999999999654
No 163
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.16 E-value=9.3e-10 Score=101.98 Aligned_cols=151 Identities=14% Similarity=0.111 Sum_probs=106.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||+|++|+.+|..|++.|.+|+++++.+...
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------------------------------
Confidence 479999999999999999999999999999874321
Q ss_pred ecHHHHHHHHHHHHHH-CCceEE-EEEEEEEEEcCCceEEEEecC---C--eEEecCEEEEccCCCCcc-ccc----ccC
Q 017240 188 VSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAASGK-LLE----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g--~~i~a~~vI~A~G~~s~~-~~~----~~~ 255 (375)
.+ ..+.+.+.+ .||+++ ++.++++..+++....|++.+ | .++.+|.||+|+|..+.. +.. ..+
T Consensus 181 ~~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~ 255 (310)
T 1fl2_A 181 AD-----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNR 255 (310)
T ss_dssp SC-----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCT
T ss_pred cc-----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccC
Confidence 00 123444555 699999 999999987655333555543 4 378999999999965432 221 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
...+.++..+....++|+++||.+..... -+..|+.++..+|..|...+.+.
T Consensus 256 ~g~i~vd~~~~t~~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 256 MGEIIIDAKCETNVKGVFAAGDCTTVPYK----QIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTBSCSSC----CHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCcEEcCCCCccCCCCEEEeecccCCcch----hhhhhHhhHHHHHHHHHHHHHHh
Confidence 23344444444446789999999875432 24678899999999998888653
No 164
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.15 E-value=1.8e-10 Score=111.67 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
..+.+.|.+.+++.|++|+ +++|++|..++++...|+++ |.++.||.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 4577788888888999999 99999999877644447775 67899999999999764
No 165
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.15 E-value=1.4e-10 Score=117.22 Aligned_cols=65 Identities=17% Similarity=0.136 Sum_probs=52.5
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CC--eEEecCEEEEccCCCCccc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASGKL 250 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g--~~i~a~~vI~A~G~~s~~~ 250 (375)
+.++...+...+.+.+.+.|++++ +++|+++..++++++.|++. +| .+++||.||+|+|.++..+
T Consensus 183 g~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l 253 (571)
T 2rgh_A 183 FRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKV 253 (571)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHH
T ss_pred CeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHH
Confidence 457788899999999999999999 99999999877645566653 23 3799999999999987543
No 166
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.15 E-value=3.2e-10 Score=116.19 Aligned_cols=59 Identities=12% Similarity=0.111 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe---cCCe--EEecCEEEEccCCCCc
Q 017240 190 RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDM--IVPCRLATVASGAASG 248 (375)
Q Consensus 190 ~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~---~~g~--~i~a~~vI~A~G~~s~ 248 (375)
...+...|.+.+.+.|++++ ++.|+++..+++.+..|.+ .+|. .+.|+.||+|||+++.
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 45788999999998999999 9999999876553444443 4564 5899999999999873
No 167
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.15 E-value=1.1e-09 Score=103.90 Aligned_cols=156 Identities=19% Similarity=0.107 Sum_probs=111.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|++|+.+|..|++.|.+|+++++...+...
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------------------------------------ 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------------------------------------ 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------------------------------------------
Confidence 47999999999999999999999999999987432100
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe--cCC--eEEecCEEEEccCCCCcc-ccccc----Cce
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EHD--MIVPCRLATVASGAASGK-LLEYE----EWS 257 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~--~~g--~~i~a~~vI~A~G~~s~~-~~~~~----~~~ 257 (375)
..+.+.|.+..++.||+++ ++.|+++..++++...|++ .+| .++.+|.||+|+|..+.. +.... ...
T Consensus 202 ---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g 278 (360)
T 3ab1_A 202 ---GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYEN 278 (360)
T ss_dssp ---SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETT
T ss_pred ---HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccC
Confidence 0234455666677899999 9999999877553335555 366 579999999999976543 22210 123
Q ss_pred eeecCCCCCccCCCEEEEccCCCCCC-CCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 258 YIPVGGSLPNTEQRNLAFGAAASMVH-PATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 258 ~~p~~~~~~~~~~~v~liGdaa~~~~-p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
.+.++..+....++|+++||.+.... |. -...|+.+|..+|..|...+.+.
T Consensus 279 ~i~vd~~~~t~~~~vya~GD~~~~~~~~~---~~~~A~~~g~~aa~~i~~~l~~~ 330 (360)
T 3ab1_A 279 ALVVDSHMKTSVDGLYAAGDIAYYPGKLK---IIQTGLSEATMAVRHSLSYIKPG 330 (360)
T ss_dssp EEECCTTSBCSSTTEEECSTTEECTTCCC---SHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eeeecCCCcCCCCCEEEecCccCCCCccc---eeehhHHHHHHHHHHHHhhcCCc
Confidence 44455545555679999999886432 22 24678899999999998888654
No 168
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.14 E-value=1e-09 Score=109.81 Aligned_cols=149 Identities=14% Similarity=0.061 Sum_probs=111.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.++|||||+.|+.+|..+++.|.+|+|+++..... .
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~-~------------------------------------------ 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR-G------------------------------------------ 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST-T------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc-c------------------------------------------
Confidence 579999999999999999999999999998653211 1
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc-ccc-------cC-ce
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL-LEY-------EE-WS 257 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~-~~~-------~~-~~ 257 (375)
.+ .++.+.+.+.+++.|++++ ++.++.+...++ .+.|.+.++.++.+|.|++|+|..+..- +.+ .. ..
T Consensus 261 ~D-~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~ 338 (542)
T 4b1b_A 261 FD-QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNN 338 (542)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTT
T ss_pred cc-hhHHHHHHHHHHhhcceeecceEEEEEEecCC-eEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCc
Confidence 11 2567788888889999999 999999988877 6788888888899999999999655432 221 11 12
Q ss_pred eeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 258 YIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 258 ~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.+..+.......++|+.+||.....++++ +.|..++..+++.+.
T Consensus 339 ~i~vd~~~~Ts~p~IyAiGDv~~~~p~La----~~A~~eg~~aa~~i~ 382 (542)
T 4b1b_A 339 KIIADHLSCTNIPSIFAVGDVAENVPELA----PVAIKAGEILARRLF 382 (542)
T ss_dssp EECCCTTSBCSSTTEEECTTSBTTCCCCH----HHHHHHHHHHHHHHH
T ss_pred eEeccccccccCCCeEEeccccCCchhHH----HHHHHHHHHHHHHHh
Confidence 22334444555789999999986655442 667788888777765
No 169
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.4e-11 Score=121.49 Aligned_cols=167 Identities=16% Similarity=0.081 Sum_probs=86.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC--CCCcCcHHH-HH-hcCCchhhhhhcccceEEeCCCCCeee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT--NNYGVWEDE-FR-DLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~--~~~g~~~~~-l~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
..|||+||||||+|+++|+.|++.|++|+|||+....+ .++|+.+.. +. .......... .....+..... ...+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~-~~~~g~~~~~~-~~~~ 81 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFED-AAGFGWTVGES-RFDW 81 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTEEECCC-EECH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHH-HHhcCcccCCC-CcCH
Confidence 35899999999999999999999999999999943222 122222111 00 0000000000 01111111100 0000
Q ss_pred cCCceee--cHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEe-cCCeEEecCEEEEccCCCCcccccccCce-
Q 017240 182 GRAYGRV--SRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVAC-EHDMIVPCRLATVASGAASGKLLEYEEWS- 257 (375)
Q Consensus 182 ~~~~~~v--~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~-~~g~~i~a~~vI~A~G~~s~~~~~~~~~~- 257 (375)
....... ....+...+.+.+.+.|++++...+..+. .. .|.+ .++.++.+|.+|+|+|+.+....+..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~---~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~ 156 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PN---TVKLLASGKTVTAERIVIAVGGHPSPHDALPGHEL 156 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SS---EEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CC---EEEEecCCeEEEeCEEEEecCCCcccCCCCCCccc
Confidence 0000000 01134445556666789999855555442 22 4555 46778999999999996543021221111
Q ss_pred eeec--CCCCCccCCCEEEEccCC
Q 017240 258 YIPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~~p~--~~~~~~~~~~v~liGdaa 279 (375)
.+.. ...+...+++++++|.+.
T Consensus 157 ~~~~~~~~~~~~~~~~v~ViGgG~ 180 (463)
T 4dna_A 157 CITSNEAFDLPALPESILIAGGGY 180 (463)
T ss_dssp CBCHHHHTTCSSCCSEEEEECCSH
T ss_pred cccHHHHhhhhcCCCeEEEECCCH
Confidence 1110 112234477899999764
No 170
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.14 E-value=4.2e-10 Score=111.62 Aligned_cols=56 Identities=9% Similarity=0.098 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
..+.+.|.+.+++.|++|+ +++|++|..++++...|++.+|+++.||.||.+.+..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 4577888889999999999 9999999998886777999999999999999988754
No 171
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.14 E-value=1.3e-09 Score=101.02 Aligned_cols=150 Identities=21% Similarity=0.220 Sum_probs=105.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++..... .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~--------------------------------------- 180 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----C--------------------------------------- 180 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----S---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----C---------------------------------------
Confidence 579999999999999999999999999999864221 0
Q ss_pred ecHHHHHHHHHHHHH-HCCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEccCCCCcc-ccc-------
Q 017240 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGK-LLE------- 252 (375)
Q Consensus 188 v~~~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~-~~~------- 252 (375)
+ ..+.+.+. +.||+++ ++.++++..++++...|++. +|+ ++.+|.||+|+|..+.. +..
T Consensus 181 -~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~ 254 (311)
T 2q0l_A 181 -A-----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSML 254 (311)
T ss_dssp -C-----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBS
T ss_pred -C-----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccce
Confidence 0 11233343 3799999 99999998764433345554 564 78999999999965432 211
Q ss_pred --ccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 253 --YEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 253 --~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
..+...+.++..+....++++++||.+... |.. ...|+.+|..+|..|...+++
T Consensus 255 l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~-~~~---~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 255 CKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFA-PKQ---VVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp SCBCTTSCBCCCTTCBCSSTTEEECSTTBTTC-CCC---HHHHHHHHHHHHHHHHHHHHC
T ss_pred eEeccCCCEEeCCccccCCCCeEEcccccCcc-hHH---HHHHHHhHHHHHHHHHHHHhh
Confidence 112233444444444567899999998752 222 477889999999999887753
No 172
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.14 E-value=3e-11 Score=119.96 Aligned_cols=110 Identities=15% Similarity=0.047 Sum_probs=70.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC---CcEEEECCCCCCCCC-CcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeec
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLG---LNVGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G---~~V~liE~~~~~~~~-~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
.+||+|||||++|+++|..|++.| .+|+|||++...+.. .++ ...+.. . . . .+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~-~~~~~~--~-------~-------~--~~~--- 92 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM-ALWIGE--Q-------I-------A--GPE--- 92 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH-HHHHTT--S-------S-------S--CSG---
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc-chhhcC--c-------c-------C--CHH---
Confidence 489999999999999999999988 999999988643211 111 000000 0 0 0 000
Q ss_pred CCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-CCeEEecCEEEEccCCCCc
Q 017240 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HDMIVPCRLATVASGAASG 248 (375)
Q Consensus 183 ~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~g~~i~a~~vI~A~G~~s~ 248 (375)
.+...+.+.+.+.|++++ +++|+.++.+++ .+.+... ++.++.+|.||+|||+.+.
T Consensus 93 ---------~~~~~~~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 93 ---------GLFYSDKEELESLGAKVYMESPVQSIDYDAK-TVTALVDGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp ---------GGBSCCHHHHHHTTCEEETTCCEEEEETTTT-EEEEEETTEEEEEECSEEEECCCEEEC
T ss_pred ---------HhhhcCHHHHHhCCCEEEeCCEEEEEECCCC-EEEEEeCCcEEEEECCEEEECCCCCcC
Confidence 000011233456799998 999999986655 4444421 2357999999999997543
No 173
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.13 E-value=3e-11 Score=113.43 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHH--CCCcEEEECCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAK--LGLNVGLIGPDLPFT 143 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~--~G~~V~liE~~~~~~ 143 (375)
++||+|||||||||+||++|++ .|++|+|||+....+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 5899999999999999999985 599999999976443
No 174
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.13 E-value=9.7e-10 Score=108.80 Aligned_cols=149 Identities=17% Similarity=0.123 Sum_probs=108.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+++++.... ..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-~~------------------------------------------ 224 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-RG------------------------------------------ 224 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS-TT------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC-cc------------------------------------------
Confidence 47999999999999999999999999999874211 10
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC-----eEEecCEEEEccCCCCccc-c-------cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD-----MIVPCRLATVASGAASGKL-L-------EY 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g-----~~i~a~~vI~A~G~~s~~~-~-------~~ 253 (375)
+ ..++.+.+.+.+++.||+++ ++.|+++...+++.+.|++.++ .++.+|.||+|+|..+... . ..
T Consensus 225 ~-d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 303 (483)
T 3dgh_A 225 F-DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTV 303 (483)
T ss_dssp S-CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCC
T ss_pred c-CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccc
Confidence 1 12466777888888999999 9999999876554456766554 2799999999999654321 1 11
Q ss_pred cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 254 EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 254 ~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
.. ..+.++..+....++|+++||.+...... ...|..+|..+|+.|.
T Consensus 304 ~~-G~i~vd~~~~t~~~~IyA~GD~~~~~~~~----~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 304 QK-DKIPVDSQEATNVANIYAVGDIIYGKPEL----TPVAVLAGRLLARRLY 350 (483)
T ss_dssp BT-TBBCCCTTCBCSSTTEEECSTTBTTSCCC----HHHHHHHHHHHHHHHH
T ss_pred cC-CEEEECcCCccCCCCEEEEEcccCCCCcc----HHHHHHHHHHHHHHHc
Confidence 22 44555555555678999999997432222 3668888988888775
No 175
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.13 E-value=2.5e-11 Score=117.76 Aligned_cols=105 Identities=15% Similarity=0.228 Sum_probs=71.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCc--EEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLN--VGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~--V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.||+|||||++|+++|..|++.|++ |+|||+++..+-.. .+....+... ....
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~-------------------~~~~----- 58 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGS-------------------LERP----- 58 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTS-------------------SSSC-----
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCC-------------------CCHH-----
Confidence 4899999999999999999999987 99999876433111 1110111000 0000
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.+ ....+.+.+.|++++ +++|+.++.... .|++.+|+++.+|.+|+|||+.+
T Consensus 59 -------~~-~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 59 -------PI-LAEADWYGEARIDMLTGPEVTALDVQTR---TISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp -------CB-SSCTTHHHHTTCEEEESCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred -------Hh-cCCHHHHHHCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEccCCcc
Confidence 00 001123345799999 889999987654 67788888999999999999764
No 176
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.13 E-value=1.5e-09 Score=101.69 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=112.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||+|..|+.+|..|++.|.+|+++++...+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------- 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------- 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CC--eEEecCEEEEccCCCCcc-ccccc----Cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASGK-LLEYE----EW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g--~~i~a~~vI~A~G~~s~~-~~~~~----~~ 256 (375)
...+.+.+.+.+++.||+++ ++.|+++..+++ ...|++. +| .++.+|.||+|+|..+.. +.... ..
T Consensus 190 --~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~ 266 (335)
T 2zbw_A 190 --HEASVKELMKAHEEGRLEVLTPYELRRVEGDER-VRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEK 266 (335)
T ss_dssp --CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEET
T ss_pred --cHHHHHHHHhccccCCeEEecCCcceeEccCCC-eeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccC
Confidence 11244566777778899999 999999987533 4456554 66 689999999999976543 22110 12
Q ss_pred eeeecCCCCCccCCCEEEEccCCCCCC-CCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 257 SYIPVGGSLPNTEQRNLAFGAAASMVH-PATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 257 ~~~p~~~~~~~~~~~v~liGdaa~~~~-p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
..+.++..+....++++++||.+.... +. -...|+.+|..+|..|...+.+.
T Consensus 267 g~i~vd~~~~t~~~~vya~GD~~~~~~~~~---~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 267 NKIKVDTTMATSIPGVYACGDIVTYPGKLP---LIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp TEEECCTTCBCSSTTEEECSTTEECTTCCC---CHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CeeeeCCCCCCCCCCEEEeccccccCcchh---hhhhhHHHHHHHHHHHHHHhhhh
Confidence 334445444555679999999886432 22 24678889999999999888654
No 177
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.13 E-value=3.6e-11 Score=119.41 Aligned_cols=158 Identities=12% Similarity=0.030 Sum_probs=82.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC--CCCcCcHHH-HHhc-CCchhhhhhcccceEEeCCCCCeee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT--NNYGVWEDE-FRDL-GLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~--~~~g~~~~~-l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
..|||+||||||+|+++|+.|++.|++|+|||++...+ .++|+.+.. +-.. ....... ......+..
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~-~~~~~g~~~-------- 77 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHAS-QTDLFGIQV-------- 77 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHT-CGGGGTEEC--------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHh-hhhhcCcCC--------
Confidence 35899999999999999999999999999999975332 123332211 1000 0000000 000000000
Q ss_pred cCCceeecHHHHHH-----------HHHHHHHHC-CceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc
Q 017240 182 GRAYGRVSRHLLHE-----------ELLRRCVES-GVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (375)
Q Consensus 182 ~~~~~~v~~~~l~~-----------~L~~~~~~~-gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~ 249 (375)
....++...+.+ .+...+... +++++...+.... . ..|.+.++.++.+|.||+|||+.+..
T Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~---~~v~~~~~~~~~~d~lViATGs~p~~ 150 (492)
T 3ic9_A 78 --DRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--E---HTLQVDDHSQVIAKRIVIATGSRPNY 150 (492)
T ss_dssp --SEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--T---TEEEETTTEEEEEEEEEECCCEECCC
T ss_pred --CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--C---CEEEEcCCcEEEeCEEEEccCCCCcC
Confidence 000122222222 222333332 4555533333222 2 25667778899999999999976543
Q ss_pred cc--cccCceeeec--CCCCCccCCCEEEEccCC
Q 017240 250 LL--EYEEWSYIPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 250 ~~--~~~~~~~~p~--~~~~~~~~~~v~liGdaa 279 (375)
+. ......++.. ...+...++++++||.+.
T Consensus 151 p~~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ 184 (492)
T 3ic9_A 151 PEFLAAAGSRLLTNDNLFELNDLPKSVAVFGPGV 184 (492)
T ss_dssp CHHHHTTGGGEECHHHHTTCSSCCSEEEEESSCH
T ss_pred CCCCCccCCcEEcHHHHhhhhhcCCeEEEECCCH
Confidence 31 1111112221 112334578999999775
No 178
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.12 E-value=2.8e-10 Score=111.67 Aligned_cols=41 Identities=12% Similarity=0.146 Sum_probs=35.8
Q ss_pred ceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 206 VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 206 v~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
++|+ ++.|++|..+++ .+.|++.+|+++.||.||+|+....
T Consensus 248 ~~i~~~~~V~~i~~~~~-~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-CYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEECSS-SEEEEESSSCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEcCC-eEEEEECCCCEEECCEEEECCCHHH
Confidence 6888 999999998877 5889999998899999999998653
No 179
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=6.7e-10 Score=106.08 Aligned_cols=146 Identities=20% Similarity=0.260 Sum_probs=106.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||++|+.+|..|++.|.+|+|+|+.+.... +
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~----------------------------------------- 181 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-L----------------------------------------- 181 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-C-----------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-C-----------------------------------------
Confidence 4799999999999999999999999999998753211 0
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---cc-Cceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YE-EWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~-~~~~~p~ 261 (375)
...+.+.+.+.+++.||+++ ++.|+++. .+ .|++++|+ +.+|.||+|+|..+.. +.+ .. ... +.+
T Consensus 182 --~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~~g-i~V 252 (367)
T 1xhc_A 182 --DEELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTGRG-ILI 252 (367)
T ss_dssp --CHHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBSSS-EEC
T ss_pred --CHHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCCCC-EEE
Confidence 12466777888888999999 99999886 22 46778887 9999999999976543 211 11 112 445
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
+..+....++|+++||.+....+..+ -...|..+|..+|..|.
T Consensus 253 d~~~~t~~~~IyA~GD~a~~~~~~~~-~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 253 DDNFRTSAKDVYAIGDCAEYSGIIAG-TAKAAMEQARVLADILK 295 (367)
T ss_dssp CTTSBCSSTTEEECGGGEEBTTBCCC-SHHHHHHHHHHHHHHHT
T ss_pred CCCcccCCCCEEEeEeeeecCCCCcc-HHHHHHHHHHHHHHHhc
Confidence 55555556799999999864332111 23678889998888875
No 180
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.11 E-value=4.3e-10 Score=109.16 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
..+.+.|.+.+++.|++|+ +++|++|..+++ .+ | +.+|.++.||.||+|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~v-V-~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEK-KV-Y-TRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTT-EE-E-ETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECC-EE-E-EeCCcEEEeCEEEECCCHHH
Confidence 3567777888888999999 999999988766 55 6 45667899999999999753
No 181
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.11 E-value=2.2e-11 Score=120.44 Aligned_cols=168 Identities=15% Similarity=0.083 Sum_probs=85.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC--CCCcCcHH-HHHh-cCCchhhhhhcccceEEeCCCCCeee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT--NNYGVWED-EFRD-LGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~--~~~g~~~~-~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
..+||+||||||+|+++|+.|++.|++|+|||++...+ .++|+.+. .+-. ......... .....+.... ....+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~-~~~~g~~~~~-~~~~~ 96 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHD-HADYGFPSCE-GKFNW 96 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTT-TTTTTSCCCC-CCCCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHH-HHhcCccCCC-CccCH
Confidence 35899999999999999999999999999999774322 11222111 0000 000000000 0000000000 00000
Q ss_pred cCCceee--cHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc--cccCce
Q 017240 182 GRAYGRV--SRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL--EYEEWS 257 (375)
Q Consensus 182 ~~~~~~v--~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~--~~~~~~ 257 (375)
....... ....+...+...+++.|++++...+..+... .+.|. .++.++.+|.||+|||+.+..+. +..+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~---~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDP---KPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCS---SCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCC---eEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 0000000 0122344455566678999984445444322 23555 35678999999999996543321 222211
Q ss_pred e-eec--CCCCCccCCCEEEEccCC
Q 017240 258 Y-IPV--GGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 258 ~-~p~--~~~~~~~~~~v~liGdaa 279 (375)
. +.. ...+...++++++||.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~vvViGgG~ 197 (478)
T 3dk9_A 173 LGITSDGFFQLEELPGRSVIVGAGY 197 (478)
T ss_dssp GSBCHHHHTTCCSCCSEEEEECCSH
T ss_pred eeEchHHhhchhhcCccEEEECCCH
Confidence 1 110 011234468999999875
No 182
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.11 E-value=1.1e-11 Score=133.15 Aligned_cols=154 Identities=12% Similarity=0.133 Sum_probs=92.4
Q ss_pred ccccceeeccCCCCccccccCc-cchhhcCCcccccccccCC--cchhcccccccCCCCCCCCCCcccEEEECCCHHHHH
Q 017240 45 YKVTARATSNNAGSESCVAVKE-EDYIKAGGSQLVFVQMQQN--KSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLA 121 (375)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~ 121 (375)
|+||++..|++ .|++... ++++..+..+.+....... ......+..... ...+ ....+||+||||||||++
T Consensus 128 rvCp~~~~Ce~----~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~-~~~~-~~~~~~VvVIGgGpAGl~ 201 (1025)
T 1gte_A 128 MVCPTSDLCVG----GCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQ-EKMP-EAYSAKIALLGAGPASIS 201 (1025)
T ss_dssp HHCCGGGSGGG----GCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCG-GGSC-GGGGCCEEEECCSHHHHH
T ss_pred CCCCChhhHHh----hCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCcccccc-ccCC-ccCCCEEEEECccHHHHH
Confidence 89999999998 8998763 5677776666543221000 000000000000 0001 123589999999999999
Q ss_pred HHHHHHHCCC-cEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCceeecHHHHHHHHHHH
Q 017240 122 LAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRR 200 (375)
Q Consensus 122 aA~~La~~G~-~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~ 200 (375)
+|..|++.|+ +|+|||+....+.. + ..+++. +. +. ..+.....+.
T Consensus 202 aA~~L~~~G~~~Vtv~E~~~~~GG~---~-----~~~ip~------------------------~~-~~-~~~~~~~~~~ 247 (1025)
T 1gte_A 202 CASFLARLGYSDITIFEKQEYVGGL---S-----TSEIPQ------------------------FR-LP-YDVVNFEIEL 247 (1025)
T ss_dssp HHHHHHHTTCCCEEEEESSSSCSTH---H-----HHTSCT------------------------TT-SC-HHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEEeCCCCCCcc---c-----cccCCc------------------------cc-CC-HHHHHHHHHH
Confidence 9999999999 79999987533311 0 011100 00 11 1244455667
Q ss_pred HHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 201 CVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 201 ~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
+++.||+++ ++.+.. . .|++.++.++.+|.||+|+|++
T Consensus 248 ~~~~gv~~~~~~~v~~-----~---~v~~~~~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 248 MKDLGVKIICGKSLSE-----N---EITLNTLKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHTTTCEEEESCCBST-----T---SBCHHHHHHTTCCEEEECCCCC
T ss_pred HHHCCcEEEcccEecc-----c---eEEhhhcCccCCCEEEEecCCC
Confidence 778899998 665521 1 2344445457899999999985
No 183
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.11 E-value=1.1e-10 Score=114.65 Aligned_cols=160 Identities=17% Similarity=0.212 Sum_probs=84.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHH-H-HHhcCCchhhhhhcccceEEeCCCCCeeec
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWED-E-FRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~-~-l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
|||+||||||+|+++|..|++.|++|+|||++...+.. +|+.+. . +....+...... ....+.... ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~---~~~- 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKG---VEL- 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECC---EEE-
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCC---Ccc-
Confidence 79999999999999999999999999999998544321 222111 0 000000000000 000011100 000
Q ss_pred CCce-eec-H----HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc--ccc
Q 017240 183 RAYG-RVS-R----HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL--LEY 253 (375)
Q Consensus 183 ~~~~-~v~-~----~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~--~~~ 253 (375)
.+. .+. . ..+...+.+.+++.|++++ ++. ..+ +.+ .+.|.+ +|.++.+|.+|+|||+.+..+ ...
T Consensus 76 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i--~~~-~~~v~~-~g~~~~~d~lviAtG~~p~~~~~~g~ 149 (455)
T 2yqu_A 76 -DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTA-RFL--SER-KVLVEE-TGEELEARYILIATGSAPLIPPWAQV 149 (455)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCE-EES--SSS-EEEETT-TCCEEEEEEEEECCCEEECCCTTBCC
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEe--cCC-eEEEee-CCEEEEecEEEECCCCCCCCCCCCCC
Confidence 000 000 1 1133334556667899998 543 322 223 455655 667899999999999754332 111
Q ss_pred cCceeeecC--CCCCccCCCEEEEccCC
Q 017240 254 EEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 254 ~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
....++... ..+...++++++||.+.
T Consensus 150 ~~~~v~~~~~~~~~~~~~~~vvIiGgG~ 177 (455)
T 2yqu_A 150 DYERVVTSTEALSFPEVPKRLIVVGGGV 177 (455)
T ss_dssp CSSSEECHHHHTCCSSCCSEEEEECCSH
T ss_pred CcCcEechHHhhccccCCCeEEEECCCH
Confidence 111122211 11223467899999764
No 184
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.11 E-value=2.3e-09 Score=99.25 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=107.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++......
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 184 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------- 184 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec--CCe--EEecCEEEEccCCCCccc-cc-------c-
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HDM--IVPCRLATVASGAASGKL-LE-------Y- 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~--~g~--~i~a~~vI~A~G~~s~~~-~~-------~- 253 (375)
+. .+ +.+.+++.||+++ ++.|+++..++++...|++. +|+ ++.+|.||+|+|..+... .. +
T Consensus 185 -~~-~~---~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~ 259 (315)
T 3r9u_A 185 -AP-ST---VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCN 259 (315)
T ss_dssp -CH-HH---HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSC
T ss_pred -CH-HH---HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceee
Confidence 01 11 1222346899999 99999998776534445544 774 799999999999654322 11 1
Q ss_pred -cCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 254 -EEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 254 -~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
.....+.++..+....++|+++||.+... |. .+..|+.+|..+|..|...+++
T Consensus 260 ~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 260 MEEGGQVSVDLKMQTSVAGLFAAGDLRKDA-PK---QVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGBTTC-CC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcEEeCCCcccCCCCEEEeecccCCc-hh---hhhhHHhhHHHHHHHHHHHHHh
Confidence 12234444544555568999999997532 22 2478899999999999988864
No 185
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.11 E-value=6.9e-11 Score=117.00 Aligned_cols=109 Identities=15% Similarity=0.161 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC-CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~-~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
+||+|||||++|+++|..|++. |.+|+|||+....+. .+++ ...+. +. .
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-~~~~~--~~------------------~------- 88 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGL-PYVIS--GA------------------I------- 88 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGH-HHHHT--TS------------------S-------
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCc-chhhc--CC------------------c-------
Confidence 6999999999999999999997 899999998764421 1111 00000 00 0
Q ss_pred ceeecHHHHHHHHHHHH-HHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G~~s~ 248 (375)
.+...+.....+.+ +..|++++ ++.|+.++.+++ .+.+.. .+|+ ++.+|.||+|||+.+.
T Consensus 89 ---~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 89 ---ASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKK-IVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp ---SCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ---CCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCC-EEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 00000111112223 34599999 899999987665 555554 3465 7999999999996543
No 186
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.10 E-value=4.7e-10 Score=114.90 Aligned_cols=62 Identities=8% Similarity=-0.004 Sum_probs=48.2
Q ss_pred ecHHHHHHHHHHHHHHC--CceEE-EEEEEEEEEcCC---ceEEEEe---cCC--eEEecCEEEEccCCCCcc
Q 017240 188 VSRHLLHEELLRRCVES--GVSYL-SSKVESITESTS---GHRLVAC---EHD--MIVPCRLATVASGAASGK 249 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~--gv~i~-~~~v~~i~~~~~---~~~~V~~---~~g--~~i~a~~vI~A~G~~s~~ 249 (375)
+....+...|.+.+++. ||+++ ++.|+++..+++ .+.+|.. .+| ..+.|+.||+|||+++..
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 44567888888888887 99999 999999988765 4555543 345 368999999999988754
No 187
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.10 E-value=2.6e-09 Score=105.83 Aligned_cols=150 Identities=14% Similarity=0.121 Sum_probs=108.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+++++.... ..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l-~~------------------------------------------ 222 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL-RG------------------------------------------ 222 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS-TT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc-cc------------------------------------------
Confidence 46999999999999999999999999999875311 00
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC---Ce--EEecCEEEEccCCCCccc-c-------cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---DM--IVPCRLATVASGAASGKL-L-------EY 253 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g~--~i~a~~vI~A~G~~s~~~-~-------~~ 253 (375)
+ ...+.+.+.+.+++.||+++ ++.++++...+++.+.|++.+ |+ ++.+|.||+|+|..+... + .+
T Consensus 223 ~-d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 301 (488)
T 3dgz_A 223 F-DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 301 (488)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCB
T ss_pred C-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEe
Confidence 1 12466777888888999999 999999987554345565543 54 578999999999654332 1 11
Q ss_pred c-CceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 254 E-EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 254 ~-~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
. +...+.++..+....++|+++||.+...... ...|+.+|..+++.|.
T Consensus 302 ~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~----~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 302 NPKNQKIIVDAQEATSVPHIYAIGDVAEGRPEL----TPTAIKAGKLLAQRLF 350 (488)
T ss_dssp CSSSCCBCCCTTSBCSSTTEEECGGGBTTCCCC----HHHHHHHHHHHHHHHH
T ss_pred cCCCCeEeECCCCccCCCCEEEeEEecCCCCcc----hhHHHHHHHHHHHHHc
Confidence 2 3344555555555668999999987432222 3568888988888775
No 188
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.10 E-value=6.5e-10 Score=108.98 Aligned_cols=153 Identities=20% Similarity=0.136 Sum_probs=110.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||+.|+.+|..|++.|.+|+++++........
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 489999999999999999999999999999875332110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-c-----ccccCceeee
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-L-----LEYEEWSYIP 260 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~-----~~~~~~~~~p 260 (375)
+ ...+.+.+.+.+++. ++++ ++.|+.+..++. ...+ ..++.++.+|.||+|+|..+.. + ....+...+.
T Consensus 188 ~-~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~-v~~v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~ 263 (449)
T 3kd9_A 188 F-DKEVTDILEEKLKKH-VNLRLQEITMKIEGEER-VEKV-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIW 263 (449)
T ss_dssp S-CHHHHHHHHHHHTTT-SEEEESCCEEEEECSSS-CCEE-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBC
T ss_pred c-CHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCc-EEEE-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEE
Confidence 1 134667777778778 9999 999999876542 3234 3456789999999999976442 1 1122334455
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChH-----HHHHHHhhHHHHHHHHH
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGY-----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~-----Gi~~al~~a~~~a~~i~ 305 (375)
++..+....++|+++||.+...++.+|. -...|..+|..+|+.|.
T Consensus 264 vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 264 TNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp CCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred ECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 5555555678999999999776665553 34678888888888775
No 189
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.10 E-value=1.8e-09 Score=100.21 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=108.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||+|+.|+.+|..|++.|.+|+++++......
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHHHHHH-HCCceEE-EEEEEEEEEcCCceEEEEecC---Ce--EEecCEEEEccCCCCcc-cc-----ccc
Q 017240 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACEH---DM--IVPCRLATVASGAASGK-LL-----EYE 254 (375)
Q Consensus 188 v~~~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g~--~i~a~~vI~A~G~~s~~-~~-----~~~ 254 (375)
+. .+.+.+. +.||+++ ++.|+++..++. ...|++.+ |+ ++.+|.||+|+|..+.. +. ...
T Consensus 192 -~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~ 264 (323)
T 3f8d_A 192 -QP-----IYVETVKKKPNVEFVLNSVVKEIKGDKV-VKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETD 264 (323)
T ss_dssp -CH-----HHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBC
T ss_pred -CH-----HHHHHHHhCCCcEEEeCCEEEEEeccCc-eeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeec
Confidence 01 1223333 3599999 999999987644 55566654 64 79999999999976652 21 112
Q ss_pred CceeeecCCCCCccCCCEEEEccCCCCC-CCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 255 EWSYIPVGGSLPNTEQRNLAFGAAASMV-HPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 255 ~~~~~p~~~~~~~~~~~v~liGdaa~~~-~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
+...+.++..+....++++++||++... .| ..+..|+.+|..+|..|...+.+.
T Consensus 265 ~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~---~~~~~A~~~g~~aa~~i~~~l~~~ 319 (323)
T 3f8d_A 265 TNGYIKVDEWMRTSVPGVFAAGDCTSAWLGF---RQVITAVAQGAVAATSAYRYVTEK 319 (323)
T ss_dssp TTSSBCCCTTCBCSSTTEEECSTTBSTTTTC---CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcEecCCCceecCCCEEEcceecCCCCcc---cceeehhhHHHHHHHHHHHHHHHh
Confidence 3334444444455567999999998753 12 224788999999999999888653
No 190
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.09 E-value=1.9e-09 Score=100.67 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=105.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|+.|+.+|..|++.|.+|+++++..... .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~--------------------------------------- 189 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----A--------------------------------------- 189 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----S---------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----c---------------------------------------
Confidence 479999999999999999999999999999874221 0
Q ss_pred ecHHHHHHHHHHHHH-HCCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEccCCCCcc-ccc----ccC
Q 017240 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGK-LLE----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~G~~s~~-~~~----~~~ 255 (375)
+ ..+.+.+. +.||+++ ++.|+++..++. ...|++. +|+ ++.+|.||+|+|..+.. +.. ..+
T Consensus 190 -~-----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~ 262 (325)
T 2q7v_A 190 -N-----KVAQARAFANPKMKFIWDTAVEEIQGADS-VSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRD 262 (325)
T ss_dssp -C-----HHHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCT
T ss_pred -c-----hHHHHHHHhcCCceEecCCceEEEccCCc-EEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCC
Confidence 0 11223333 3699999 999999987533 4455554 563 79999999999965532 211 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
...+.++..+....++++++||.+... |. ....|+.+|..+|..|...+.+.
T Consensus 263 ~g~i~vd~~~~t~~~~vya~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 263 DGYVDVRDEIYTNIPMLFAAGDVSDYI-YR---QLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp TSCBCCBTTTBCSSTTEEECSTTTCSS-CC---CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccEecCCCCccCCCCEEEeecccCcc-HH---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 233444444444567899999998653 22 24788999999999999888764
No 191
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.09 E-value=6.7e-10 Score=110.29 Aligned_cols=154 Identities=18% Similarity=0.189 Sum_probs=111.4
Q ss_pred ccEEEECCCHHHHHHHHHHHH----CCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecC
Q 017240 108 LDLVVIGCGPAGLALAAESAK----LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~----~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
-.|+|||||+.|+.+|..|++ .|.+|+++++.......
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-------------------------------------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-------------------------------------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--------------------------------------
Confidence 479999999999999999987 47899999876421100
Q ss_pred CceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc-----ccC-
Q 017240 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE-----YEE- 255 (375)
Q Consensus 184 ~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~-----~~~- 255 (375)
.+ +..+.+.+.+.+++.||+++ ++.|+.+..+++ .+.|++.+|+++.+|.||+|+|..+.. +.. ...
T Consensus 223 ---~l-~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~-~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~ 297 (493)
T 1m6i_A 223 ---IL-PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSG-KLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSD 297 (493)
T ss_dssp ---TS-CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETT-EEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTT
T ss_pred ---cC-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCC-eEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccC
Confidence 01 13466777888888999999 999999987655 567888899899999999999976543 211 111
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChH----HHHHHHhhHHHHHHHHH
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGY----SVVRSLSEAPNYASAIA 305 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~----Gi~~al~~a~~~a~~i~ 305 (375)
...+.++..+.. .++|+++||.+...++..|. ....|+.+|..+|..|.
T Consensus 298 ~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 298 FGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp TCSEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCcEEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 123444444443 47899999999876665442 13478888888888775
No 192
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.09 E-value=1.3e-10 Score=117.87 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=74.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC-CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeec
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~-~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
...||+|||||++|+++|..|++. |.+|+|||++...+- ..++. ..+. + ...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp-~~~~--g-------~~~--------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLP-YYIG--G-------VIT--------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHH-HHHT--T-------SSC---------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCc-hhhc--C-------cCC---------------
Confidence 347999999999999999999998 899999999865431 11110 0000 0 000
Q ss_pred CCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccCCCC
Q 017240 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (375)
Q Consensus 183 ~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G~~s 247 (375)
.....+...+...+++.|++++ ++.|+.++.+++ .+.+.. .+|. ++.+|.||+|||+.+
T Consensus 90 -----~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~-~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 90 -----ERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEK-TITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp -----CGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -----ChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCC-EEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 0011122334444556899998 999999987766 555544 3454 789999999999644
No 193
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.09 E-value=1.3e-09 Score=111.62 Aligned_cols=143 Identities=19% Similarity=0.197 Sum_probs=84.8
Q ss_pred cccEEEECCCHHHHHHHHHHH---H-CCCcEEEECCCCCCCCC-C--cC------c------------HHHHH----h-c
Q 017240 107 ILDLVVIGCGPAGLALAAESA---K-LGLNVGLIGPDLPFTNN-Y--GV------W------------EDEFR----D-L 156 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La---~-~G~~V~liE~~~~~~~~-~--g~------~------------~~~l~----~-~ 156 (375)
++||||||||+||+++|+.|+ + .|.+|+||||....... + |. + ...++ . .
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 589999999999999999999 6 89999999998642210 0 11 0 01111 0 1
Q ss_pred CCc--hhhh----------hhcccceEEeCCC---CCeeecCCceeecHHHHHHHHHHHHHHC-Cc-eEE-EEEEEEEEE
Q 017240 157 GLE--GCIE----------HVWRDTVVYIDED---EPILIGRAYGRVSRHLLHEELLRRCVES-GV-SYL-SSKVESITE 218 (375)
Q Consensus 157 g~~--~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~l~~~L~~~~~~~-gv-~i~-~~~v~~i~~ 218 (375)
++. ..+. .......+.+... .....+.....++...+...|.+.+++. || +++ ++.|+++..
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~ 181 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLK 181 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEE
Confidence 111 0000 0000000111100 0000000011233445777888888877 99 999 999999987
Q ss_pred cCC---ceEEEEe---cCCe--EEecCEEEEccCCCCcc
Q 017240 219 STS---GHRLVAC---EHDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 219 ~~~---~~~~V~~---~~g~--~i~a~~vI~A~G~~s~~ 249 (375)
+++ .+.+|.. .+|. .+.|+.||+|||+++..
T Consensus 182 ~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 182 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 665 4555543 4553 68999999999998764
No 194
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.09 E-value=1.6e-10 Score=114.53 Aligned_cols=169 Identities=18% Similarity=0.116 Sum_probs=83.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC---------CCC---CCcCcHHH-HHhcC-CchhhhhhcccceE
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP---------FTN---NYGVWEDE-FRDLG-LEGCIEHVWRDTVV 171 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~---------~~~---~~g~~~~~-l~~~g-~~~~~~~~~~~~~~ 171 (375)
..|||+||||||+|+++|+.|++.|++|+|||+... .+. ++|+.+.. +.... ....... .....+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~-~~~~g~ 86 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHE-AAAYGW 86 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHH-HHHTTB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHH-HHhcCc
Confidence 459999999999999999999999999999995321 111 11221110 00000 0000000 000000
Q ss_pred EeCCCCCeeecCCceeec--HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCC-eEEecCEEEEccCCCCc
Q 017240 172 YIDEDEPILIGRAYGRVS--RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD-MIVPCRLATVASGAASG 248 (375)
Q Consensus 172 ~~~~~~~~~~~~~~~~v~--~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g-~~i~a~~vI~A~G~~s~ 248 (375)
.........+.......+ -..+...+...+.+.+++++...+..+. .+ .+.|.+.+| .++.+|.||+|||+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~--~~-~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVD--SH-TLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--TT-EEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEcc--CC-EEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 000000000000000000 0112222334456679999854554443 22 567777777 47999999999996543
Q ss_pred ccccccCc--eeee--cCCCCCccCCCEEEEccCC
Q 017240 249 KLLEYEEW--SYIP--VGGSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 249 ~~~~~~~~--~~~p--~~~~~~~~~~~v~liGdaa 279 (375)
.+ +..+. ..+. ....+...++++++||.+.
T Consensus 164 ~p-~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ 197 (483)
T 3dgh_A 164 YP-DIPGAVEYGITSDDLFSLDREPGKTLVVGAGY 197 (483)
T ss_dssp CC-SSTTHHHHCBCHHHHTTCSSCCCEEEEECCSH
T ss_pred CC-CCCCcccccCcHHHHhhhhhcCCcEEEECCCH
Confidence 32 22111 0111 0112334567899998764
No 195
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.08 E-value=7.6e-11 Score=112.67 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=68.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.||+||||||||+++|..|++.| +|+|||++.........+...+. +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~--g~----------------------------- 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIA--GF----------------------------- 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHT--TS-----------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHh--CC-----------------------------
Confidence 69999999999999999999999 99999987643211111111110 00
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
++...+.....+.+++.|++++ +++|+.++.+.. .|+ .+|.++.+|.+|+|||+.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~~---~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 IPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRK---VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp SCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTTT---EEE-ESSCEEECSEEEECCCEEE
T ss_pred CCHHHhccCCHHHHHhCCcEEEECCEEEEEECCCC---EEE-ECCcEEECCEEEECCCCCC
Confidence 0000011112233456799999 888998876543 455 5677899999999999654
No 196
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.08 E-value=1.6e-09 Score=106.60 Aligned_cols=159 Identities=17% Similarity=0.205 Sum_probs=82.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHHH--HHhcCCchhhhhhccc---ceEEeCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWEDE--FRDLGLEGCIEHVWRD---TVVYIDEDE 177 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~~--l~~~g~~~~~~~~~~~---~~~~~~~~~ 177 (375)
..+||+||||||+|+++|..|++.|++|+|||++ ..+. ++|+.+.. +....+...... ... ..+.....
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~-~~~~~~~g~~~~~~- 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASR-FTEPSPLGISVASP- 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHH-TTSCCTTCCCCCCC-
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhh-cccccccCcccCCC-
Confidence 3589999999999999999999999999999994 3331 22222110 000000000000 000 00000000
Q ss_pred CeeecCCce-eec-HH----HHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 178 PILIGRAYG-RVS-RH----LLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 178 ~~~~~~~~~-~v~-~~----~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
...+. .+. .. .+...+.+.+++.|++++ ++.+. + +.. .|++.+ .++.+|.+|+|||+.+..+
T Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~--~~~---~v~v~~-~~~~~d~lviATGs~p~~~ 149 (458)
T 1lvl_A 81 ----RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-L--DGK---QVEVDG-QRIQCEHLLLATGSSSVEL 149 (458)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-E--ETT---EEEETT-EEEECSEEEECCCEEECCB
T ss_pred ----ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-c--cCC---EEEEee-EEEEeCEEEEeCCCCCCCC
Confidence 00000 000 11 122234455667899999 55433 3 222 455555 6899999999999765332
Q ss_pred --ccccCceeeecC--CCCCccCCCEEEEccCC
Q 017240 251 --LEYEEWSYIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 251 --~~~~~~~~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.+... .++... ..+...++++++||.+.
T Consensus 150 ~~~~~~~-~v~~~~~~~~~~~~~~~vvViGgG~ 181 (458)
T 1lvl_A 150 PMLPLGG-PVISSTEALAPKALPQHLVVVGGGY 181 (458)
T ss_dssp TTBCCBT-TEECHHHHTCCSSCCSEEEEECCSH
T ss_pred CCCCccC-cEecHHHHhhhhccCCeEEEECcCH
Confidence 12111 122211 11223467899999774
No 197
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.08 E-value=9.5e-11 Score=114.44 Aligned_cols=109 Identities=16% Similarity=0.200 Sum_probs=72.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.+||+|||||++|+++|..|++.|+ +|+|||+.......... +.. ..... ...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~----l~~--------~~~~~------~~~------- 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPP----LSK--------AYLAG------KAT------- 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGG----GGT--------TTTTT------CSC-------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCC----CcH--------HHhCC------CCC-------
Confidence 4799999999999999999999998 79999987533211000 000 00000 000
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
...+...+.+.+++.|++++ ++.|+.++.++. .|++.+|+++.+|.||+|||+.+.
T Consensus 59 -----~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 59 -----AESLYLRTPDAYAAQNIQLLGGTQVTAINRDRQ---QVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp -----SGGGBSSCHHHHHHTTEEEECSCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEEC
T ss_pred -----hHHhcccCHHHHHhCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEcCCCCcc
Confidence 00000011234456899999 899999986544 577778888999999999997653
No 198
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.07 E-value=9.4e-11 Score=114.64 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=77.7
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~---~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.||||||||++|+++|..|++ .|++|+|||+........ .+....
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-~~~~~~------------------------------- 52 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-SNPWVG------------------------------- 52 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-GHHHHH-------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-Cccccc-------------------------------
Confidence 699999999999999999999 899999999885321100 000000
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
.+..+...+...+.+.+++.|++++.++|+.++.+++ .|++.+|.++.+|.||+|+|+.+.
T Consensus 53 ~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~---~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQ---NITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp HTSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTT---EEEETTSCEEECSEEEECCCCEEC
T ss_pred cCccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCC---EEEECCCCEEECCEEEECCCCCcC
Confidence 0112344455556666777899999779999987655 678888888999999999997654
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.9e-10 Score=113.79 Aligned_cols=167 Identities=14% Similarity=0.063 Sum_probs=87.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHH-HHHhcCCchhhhhhcccc-eEEeCCCC---
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWED-EFRDLGLEGCIEHVWRDT-VVYIDEDE--- 177 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~-~l~~~g~~~~~~~~~~~~-~~~~~~~~--- 177 (375)
..+||+||||||+|+++|+.|++.|++|+|||++. .+. +.|+.+. .+... .......... ...+....
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~---~~~~~~~~~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYA---SDLATRVSHANEYGLYQNLPLD 85 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHH---HHHHHHHTTTTTTTBSTTSCCS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHH---HHHHHHHHhHHhcCcccccccc
Confidence 35899999999999999999999999999999974 321 1222111 11000 0000000000 00000000
Q ss_pred CeeecCCce-eec-----HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCe--EEecCEEEEccCCCCcc
Q 017240 178 PILIGRAYG-RVS-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDM--IVPCRLATVASGAASGK 249 (375)
Q Consensus 178 ~~~~~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~--~i~a~~vI~A~G~~s~~ 249 (375)
.......+. ... ...+...+.+.+++.|++++...++.+ +.+ .+.|.+.+|. ++.+|.+|+|||+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i--~~~-~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 162 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFN--KDG-NVEVQKRDNTTEVYSANHILVATGGKAIF 162 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC--TTS-CEEEEESSSCCEEEEEEEEEECCCEEECC
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--eCC-EEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 000000000 000 012334455566678999994456654 233 5677777775 79999999999975433
Q ss_pred cccccCce-eeecC--CCCCccCCCEEEEccCC
Q 017240 250 LLEYEEWS-YIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 250 ~~~~~~~~-~~p~~--~~~~~~~~~v~liGdaa 279 (375)
+.+..+.. .+... ..+...++++++||.+.
T Consensus 163 p~~i~g~~~~~~~~~~~~l~~~~~~vvViGgG~ 195 (479)
T 2hqm_A 163 PENIPGFELGTDSDGFFRLEEQPKKVVVVGAGY 195 (479)
T ss_dssp CTTSTTGGGSBCHHHHHHCSSCCSEEEEECSSH
T ss_pred CCCCCCcccccchHHHhcccccCCeEEEECCCH
Confidence 21221111 11100 01223467899999774
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.06 E-value=1e-10 Score=113.50 Aligned_cols=109 Identities=15% Similarity=0.144 Sum_probs=73.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCc--EEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeec
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLN--VGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~--V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
..+||+|||||++|+++|..|++.|++ |+|||+++..+-.. .+. . .... ..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~-----~--------~~~~-------~~------ 61 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLS-----K--------EYLA-------RE------ 61 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGG-----T--------TTTT-------TS------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCC-----H--------HHHc-------CC------
Confidence 358999999999999999999999987 99999875432110 000 0 0000 00
Q ss_pred CCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 183 ~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
.....+.....+.+.+.|++++ +++|+.++.... .|.+.+|.++.+|.+|+|||+.+.
T Consensus 62 -----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 62 -----KTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAH---TVKLGDGSAIEYGKLIWATGGDPR 120 (415)
T ss_dssp -----SCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTT---EEEETTSCEEEEEEEEECCCEECC
T ss_pred -----CCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCC---EEEECCCCEEEeeEEEEccCCccC
Confidence 0000111112344456899999 889999987654 677888889999999999996543
No 201
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.05 E-value=3e-10 Score=112.91 Aligned_cols=168 Identities=16% Similarity=0.151 Sum_probs=89.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHC---CCcEEEECCCCCCCC---CCcCcHH-HH-HhcCCchhhhhhcccceEEeCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTN---NYGVWED-EF-RDLGLEGCIEHVWRDTVVYIDEDEP 178 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~---G~~V~liE~~~~~~~---~~g~~~~-~l-~~~g~~~~~~~~~~~~~~~~~~~~~ 178 (375)
.+||+|||||++|+++|+.|++. |++|+|||++. .+. ++|+.+. .+ ..................++....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~- 79 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDA- 79 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCC-
Confidence 38999999999999999999999 99999999986 331 2332211 10 000000000000000000000000
Q ss_pred eeecCCcee-ecH-----HHHHHHHHHHHHHCCceEEEEEEEEEEEc---CCceEEEEecCCe--EEecCEEEEccCCCC
Q 017240 179 ILIGRAYGR-VSR-----HLLHEELLRRCVESGVSYLSSKVESITES---TSGHRLVACEHDM--IVPCRLATVASGAAS 247 (375)
Q Consensus 179 ~~~~~~~~~-v~~-----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~---~~~~~~V~~~~g~--~i~a~~vI~A~G~~s 247 (375)
...+.. +.+ ..+...+.+.+++.|++++...++.++.. ++..+.|.+.+|. ++.+|.+|+|||+.+
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 80 ---KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred ---ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 000000 000 12344456667778999993346665541 0125677777775 799999999999754
Q ss_pred ccc--ccccCceeeecCC--CCCccCCCEEEEccCC
Q 017240 248 GKL--LEYEEWSYIPVGG--SLPNTEQRNLAFGAAA 279 (375)
Q Consensus 248 ~~~--~~~~~~~~~p~~~--~~~~~~~~v~liGdaa 279 (375)
..+ .......++.... .+...++++++||.+.
T Consensus 157 ~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ 192 (499)
T 1xdi_A 157 RILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGV 192 (499)
T ss_dssp CCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCSH
T ss_pred CCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCCH
Confidence 332 1111112222111 1223468999999764
No 202
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.05 E-value=2.1e-10 Score=115.67 Aligned_cols=109 Identities=16% Similarity=0.093 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCC-CCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~-~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.||+|||||++|+++|..|++. |++|+|||+....+- .+++. ..+. + .. .
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~-~~~~--~-------~~----------~------- 54 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLP-YHIS--G-------EI----------A------- 54 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHH-HHHT--S-------SS----------C-------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCch-HHhc--C-------Cc----------C-------
Confidence 4899999999999999999998 789999999865431 11110 0000 0 00 0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCC--eEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHD--MIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g--~~i~a~~vI~A~G~~s 247 (375)
.....+...+....++.|++++ +++|++++.+.+ .+.+.. .+| .++.+|.||+|||+.+
T Consensus 55 ---~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 55 ---QRSALVLQTPESFKARFNVEVRVKHEVVAIDRAAK-LVTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp ---CGGGGBCCCHHHHHHHHCCEEETTEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---ChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCC-EEEEEecCCCCeEEEECCEEEECCCCCC
Confidence 0001112222333345799999 999999987765 455543 224 4799999999999753
No 203
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.03 E-value=3.2e-10 Score=112.54 Aligned_cols=31 Identities=39% Similarity=0.529 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCcEEEEC
Q 017240 107 ILDLVVIGCGPAGLALAAESAK-LGLNVGLIG 137 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE 137 (375)
.|||+||||||+|+++|+.|++ .|++|+|||
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 4899999999999999999999 999999999
No 204
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.03 E-value=2.6e-10 Score=112.39 Aligned_cols=159 Identities=16% Similarity=0.147 Sum_probs=82.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHHH-HHh-cCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWEDE-FRD-LGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~~-l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.+||+||||||+|+++|..|++.|++|+|||++. .+.. .|+.+.. +.. ..+...+. ......+.... .
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~g~~~~~-~---- 76 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVR-DAPGFGVQASG-G---- 76 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTBCCC-------
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHh-hhhhcCcccCC-C----
Confidence 5899999999999999999999999999999973 3321 2222211 000 00000000 00000000000 0
Q ss_pred cCCce-eec-----HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccC
Q 017240 182 GRAYG-RVS-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEE 255 (375)
Q Consensus 182 ~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~ 255 (375)
...+. .+. -..+...+.+.+.+.|++++...++.+. .. .|++ +|.++.+|.+|+|+|+.+..+ +..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~---~v~~-~g~~~~~d~lviAtGs~p~~p-~i~G 149 (463)
T 2r9z_A 77 TLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVD--AH---TIEV-EGQRLSADHIVIATGGRPIVP-RLPG 149 (463)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TT---EEEE-TTEEEEEEEEEECCCEEECCC-SCTT
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEcc--CC---EEEE-CCEEEEcCEEEECCCCCCCCC-CCCC
Confidence 00000 000 0123334445556789999844455443 22 3444 667899999999999754322 1111
Q ss_pred ce-eeecC--CCCCccCCCEEEEccCC
Q 017240 256 WS-YIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 256 ~~-~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.. .+... ..+...++++++||.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vvVvGgG~ 176 (463)
T 2r9z_A 150 AELGITSDGFFALQQQPKRVAIIGAGY 176 (463)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECCSH
T ss_pred ccceecHHHHhhhhccCCEEEEECCCH
Confidence 11 11100 01123467899999764
No 205
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.03 E-value=1.8e-09 Score=99.11 Aligned_cols=144 Identities=13% Similarity=0.059 Sum_probs=107.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.| +|+++++....
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~--------------------------------------------- 175 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE--------------------------------------------- 175 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC---------------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC---------------------------------------------
Confidence 57999999999999999999999 99999876420
Q ss_pred ecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---c--c--Cce-e
Q 017240 188 VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---Y--E--EWS-Y 258 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~--~--~~~-~ 258 (375)
+...+.+.+++.||+++.+.|+++..+ . .|++.+|+++.+|.||+|+|..+.. +.. . . ... .
T Consensus 176 -----~~~~~~~~l~~~gv~i~~~~v~~i~~~---~-~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~ 246 (297)
T 3fbs_A 176 -----PDADQHALLAARGVRVETTRIREIAGH---A-DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGST 246 (297)
T ss_dssp -----CCHHHHHHHHHTTCEEECSCEEEEETT---E-EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEE
T ss_pred -----CCHHHHHHHHHCCcEEEcceeeeeecC---C-eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCce
Confidence 112345566778999997788888643 2 6788889899999999999966432 211 1 1 122 4
Q ss_pred eecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 259 IPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 259 ~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
+.++.......++++++||++.. |. .+..|+.+|..+|..|...+..+
T Consensus 247 i~vd~~~~t~~~~vya~GD~~~~--~~---~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 247 IVTDPMKQTTARGIFACGDVARP--AG---SVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp ECCCTTCBCSSTTEEECSGGGCT--TC---CHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEeCCCCccCCCCEEEEeecCCc--hH---HHHHHHHhHHHHHHHHHHHHhhh
Confidence 55555555566899999999876 32 24789999999999999888764
No 206
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.03 E-value=5.4e-09 Score=99.17 Aligned_cols=164 Identities=14% Similarity=0.092 Sum_probs=106.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|++|+.+|..|++.|.+|+++++........ ++... .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~--------------------------~d~~~---------~ 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD--------------------------ADPSV---------R 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTT---------S
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC--------------------------CCCCc---------c
Confidence 479999999999999999999999999999874321100 00000 0
Q ss_pred ecHHHHHHHHHHHHHHCC-ceEE-EEEEEEEEEcCCceEEEEecCCeEEe-cCEEEEccCCCCcc-ccc---c-cCceee
Q 017240 188 VSRHLLHEELLRRCVESG-VSYL-SSKVESITESTSGHRLVACEHDMIVP-CRLATVASGAASGK-LLE---Y-EEWSYI 259 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~g-v~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~-a~~vI~A~G~~s~~-~~~---~-~~~~~~ 259 (375)
+ ...+.+.+.+.+++.| |+++ ++.|+++..+++ .+.|++.+|+++. +|.||.|+|..+.. +.. + .+...+
T Consensus 212 ~-~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i 289 (369)
T 3d1c_A 212 L-SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNG-QYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDI 289 (369)
T ss_dssp C-CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETT-EEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCC
T ss_pred C-CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCC-ceEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCE
Confidence 1 1245566777777786 9999 999999976555 5678888886665 69999999976544 211 1 122223
Q ss_pred ecCCC-CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 260 PVGGS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 260 p~~~~-~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
.+... .....++++++||.+...++..+ .+..+...+..+|+.|...+.
T Consensus 290 ~v~~~~~~t~~~~v~a~GD~~~~~~~~~~-~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 290 KLTTHDESTRYPNIFMIGATVENDNAKLC-YIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp CBCTTSBBSSSTTEEECSTTCCCSSCCCC-SHHHHGGGHHHHHHHHHHHTT
T ss_pred EechhhcccCCCCeEEeccccccCCeeEE-EEehhhHHHHHHHHHHhcccC
Confidence 33322 22345789999998876655443 344556667777777765543
No 207
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.02 E-value=6e-09 Score=97.46 Aligned_cols=151 Identities=15% Similarity=0.066 Sum_probs=104.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|..|+.+|..|++.|.+|+++++......
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------- 196 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------- 196 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHH-HHHHHCCceEE-EEEEEEEEEcCC--ceEEEEec---CC--eEEecCEEEEccCCCCccc-cc----c
Q 017240 188 VSRHLLHEELL-RRCVESGVSYL-SSKVESITESTS--GHRLVACE---HD--MIVPCRLATVASGAASGKL-LE----Y 253 (375)
Q Consensus 188 v~~~~l~~~L~-~~~~~~gv~i~-~~~v~~i~~~~~--~~~~V~~~---~g--~~i~a~~vI~A~G~~s~~~-~~----~ 253 (375)
. ..+. +.+++.||+++ ++.|+++..+++ ....|++. +| .++.+|.||+|+|..+... .. .
T Consensus 197 --~----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~ 270 (333)
T 1vdc_A 197 --S----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVEL 270 (333)
T ss_dssp --C----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCB
T ss_pred --c----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccc
Confidence 0 1122 22346799999 999999987653 33335543 34 5799999999999765432 11 1
Q ss_pred cCceeeecCCC-CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 254 EEWSYIPVGGS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 254 ~~~~~~p~~~~-~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
.+...+.+... .....++|+++||.+... +. ....|+.+|..+|..|...+.+.
T Consensus 271 ~~~G~i~vd~~~~~t~~~~vya~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 271 DSDGYVVTKPGTTQTSVPGVFAAGDVQDKK-YR---QAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp CTTSCBCCCTTSCBCSSTTEEECGGGGCSS-CC---CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEechhhcccCCCCEEEeeeccCCC-ch---hHHHHHHhHHHHHHHHHHHHHhc
Confidence 12233333332 233467899999998653 22 24678899999999999988654
No 208
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.02 E-value=9.8e-11 Score=112.48 Aligned_cols=107 Identities=23% Similarity=0.178 Sum_probs=69.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.+||+|||||++|+++|..|++.| .+|+|||++... .| ...+ +.... ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~--~~---~~~~--------l~~~~-------~~--------- 54 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGR--SY---SKPM--------LSTGF-------SK--------- 54 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCC--EE---CGGG--------GGGTT-------TT---------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCC--cc---Cccc--------ccHHH-------hC---------
Confidence 489999999999999999999999 468999987421 11 0000 00000 00
Q ss_pred ceeecHHHHHH-HHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHE-ELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~-~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
......+.. .+.+.+++.|++++ ++.|+.++.+.. .|++.+ .++.+|.+|+|||+.+.
T Consensus 55 --~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~-~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 55 --NKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ---RIWIGE-EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp --TCCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT---EEEETT-EEEECSEEEECCCEEEC
T ss_pred --CCCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC---EEEECC-cEEECCEEEEeCCCCcC
Confidence 011122221 23444566899999 888998876544 455654 47999999999997543
No 209
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.01 E-value=1.8e-10 Score=114.57 Aligned_cols=34 Identities=35% Similarity=0.583 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
++||+||||||+|+++|..|++.|++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3899999999999999999999999999999984
No 210
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.01 E-value=3.6e-10 Score=110.93 Aligned_cols=160 Identities=14% Similarity=0.139 Sum_probs=82.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCC---CcCcHHH-HHhc-CCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN---YGVWEDE-FRDL-GLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~---~g~~~~~-l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.+||+||||||+|+++|+.|++.|++|+|||++. .+.. .|+.+.. +... .+...+............. .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~-----~ 77 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTI-----N 77 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEE-----E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCC-----C
Confidence 5899999999999999999999999999999973 3321 1221111 1000 0000000000000000000 0
Q ss_pred cCCce-eec-----HHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccccccC
Q 017240 182 GRAYG-RVS-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEE 255 (375)
Q Consensus 182 ~~~~~-~v~-----~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~~ 255 (375)
...+. .+. ...+...+.+.+.+.|++++...++.++ .. .|.+ +|.++.+|.+|+|||+.+..+ +..+
T Consensus 78 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~--~~---~v~~-~g~~~~~d~lviAtGs~p~~p-~i~g 150 (450)
T 1ges_A 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVD--AK---TLEV-NGETITADHILIATGGRPSHP-DIPG 150 (450)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEE--TT---EEEE-TTEEEEEEEEEECCCEEECCC-CSTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CC---EEEE-CCEEEEeCEEEECCCCCCCCC-CCCC
Confidence 00000 000 1123334445556789999844455553 22 3444 677899999999999654322 1111
Q ss_pred ce-eeecC--CCCCccCCCEEEEccCC
Q 017240 256 WS-YIPVG--GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 256 ~~-~~p~~--~~~~~~~~~v~liGdaa 279 (375)
.. .+... ..+...++++++||.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vvViGgG~ 177 (450)
T 1ges_A 151 VEYGIDSDGFFALPALPERVAVVGAGY 177 (450)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECCSH
T ss_pred ccceecHHHhhhhhhcCCeEEEECCCH
Confidence 11 11100 01223467899999764
No 211
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.01 E-value=3.5e-09 Score=98.71 Aligned_cols=151 Identities=15% Similarity=0.117 Sum_probs=108.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++......
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------- 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------------------------- 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-------------------------------------------
Confidence 5799999999999999999999999999998743210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecC-----CeEEecCEEEEccCCCCcc-ccccc----Cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH-----DMIVPCRLATVASGAASGK-LLEYE----EW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~-----g~~i~a~~vI~A~G~~s~~-~~~~~----~~ 256 (375)
. . ...+.+++.||+++ ++.|+++..+++ ...|++.+ +.++.+|.||+|+|..+.. +.... +.
T Consensus 192 ~-~-----~~~~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~ 264 (332)
T 3lzw_A 192 H-E-----HSVENLHASKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEK 264 (332)
T ss_dssp C-H-----HHHHHHHHSSCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEET
T ss_pred c-H-----HHHHHHhcCCeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccC
Confidence 0 0 01233567899999 999999987655 44565554 3679999999999966532 21110 22
Q ss_pred eeeecCCCCCccCCCEEEEccCCCCC-CCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 257 SYIPVGGSLPNTEQRNLAFGAAASMV-HPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 257 ~~~p~~~~~~~~~~~v~liGdaa~~~-~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
..+.++..+....++++++||++... .|.. +..|+.+|..+|..|...+++.
T Consensus 265 g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~---~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 265 NSIVVKSTMETNIEGFFAAGDICTYEGKVNL---IASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp TEEECCTTSBCSSTTEEECGGGEECTTCCCC---HHHHHHHHHHHHHHHHHHHCTT
T ss_pred CeEEeCCCCceecCCEEEccceecCCCCcce---EeeehhhHHHHHHHHHHhhChh
Confidence 33444544555567999999998542 2222 3678899999999999998764
No 212
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.01 E-value=7.9e-10 Score=108.93 Aligned_cols=158 Identities=18% Similarity=0.135 Sum_probs=82.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---CCcCcHH-HHH-hcCCchhhhhhcccceEEeCCCCCeee
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVWED-EFR-DLGLEGCIEHVWRDTVVYIDEDEPILI 181 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---~~g~~~~-~l~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
.+||+||||||+|+++|..|++.|++|+|||++. .+. ++|+.+. .+- ...+...... .....+. . ... .
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~-~~~~g~~-~-~~~--~ 79 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKV-AEGFGLK-A-KPE--L 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHH-HGGGTEE-C-CCE--E
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHh-HHhcCCC-C-CCC--c
Confidence 5899999999999999999999999999999976 321 2222211 000 0000000000 0000000 0 000 0
Q ss_pred cCCce-ee-cHHHH----HHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccccccc
Q 017240 182 GRAYG-RV-SRHLL----HEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYE 254 (375)
Q Consensus 182 ~~~~~-~v-~~~~l----~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~~~ 254 (375)
.+. .+ ....+ ...+.+.+++.|++++ ++. +.+. .. .|++. |.++.+|.||+|||+.+..+....
T Consensus 80 --~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~~~--~~---~v~v~-g~~~~~d~lViATGs~p~~p~gi~ 150 (464)
T 2eq6_A 80 --DLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFA-RLVG--PK---EVEVG-GERYGAKSLILATGSEPLELKGFP 150 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCE-EEEE--TT---EEEET-TEEEEEEEEEECCCEEECCBTTBC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeE-EEcc--CC---EEEEc-cEEEEeCEEEEcCCCCCCCCCCCC
Confidence 000 00 01122 2224455667899998 543 3332 23 34444 668999999999997654332121
Q ss_pred Cc-eeeecC--CCCCc-cCCCEEEEccCC
Q 017240 255 EW-SYIPVG--GSLPN-TEQRNLAFGAAA 279 (375)
Q Consensus 255 ~~-~~~p~~--~~~~~-~~~~v~liGdaa 279 (375)
.. .++... ..+.. .++++++||.+.
T Consensus 151 ~~~~v~~~~~~~~l~~~~~~~vvViGgG~ 179 (464)
T 2eq6_A 151 FGEDVWDSTRALKVEEGLPKRLLVIGGGA 179 (464)
T ss_dssp CSSSEECHHHHTCGGGCCCSEEEEECCSH
T ss_pred CCCcEEcHHHHHhhhhhcCCEEEEECCCH
Confidence 11 122211 11222 468999999764
No 213
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.00 E-value=1.6e-10 Score=114.83 Aligned_cols=31 Identities=39% Similarity=0.643 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCcEEEEC
Q 017240 107 ILDLVVIGCGPAGLALAAESAK-LGLNVGLIG 137 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE 137 (375)
.+||+||||||+|+++|+.|++ .|++|+|||
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 5899999999999999999999 999999999
No 214
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.00 E-value=3.5e-10 Score=114.95 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..+||+||||||||+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3589999999999999999999999999999974
No 215
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.99 E-value=5.5e-09 Score=102.90 Aligned_cols=147 Identities=16% Similarity=0.110 Sum_probs=106.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+++++.+.....+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL----------------------------------------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-----------------------------------------
Confidence 579999999999999999999999999999875332110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcC-CceEEEEec--CCe--EEecCEEEEccCCCCcccc--c-----cc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITEST-SGHRLVACE--HDM--IVPCRLATVASGAASGKLL--E-----YE 254 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~-~~~~~V~~~--~g~--~i~a~~vI~A~G~~s~~~~--~-----~~ 254 (375)
+ ...+.+.+.+.++ |+++ ++.|+++..++ + .+.|++. +|+ ++.+|.||+|+|..+...+ . ..
T Consensus 212 ~-d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~-~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~ 286 (466)
T 3l8k_A 212 E-DQDIVNTLLSILK---LNIKFNSPVTEVKKIKDD-EYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSIS 286 (466)
T ss_dssp C-CHHHHHHHHHHHC---CCEECSCCEEEEEEEETT-EEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBC
T ss_pred C-CHHHHHHHHhcCE---EEEEECCEEEEEEEcCCC-cEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeC
Confidence 0 1234445544443 9999 99999998766 4 5667776 564 7999999999997654331 1 12
Q ss_pred CceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 255 EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 255 ~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
+.. +.++..+....++|+++||.+... .. ...|..+|..+|+.|..
T Consensus 287 ~~G-i~vd~~~~t~~~~Iya~GD~~~~~--~~---~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 287 KTG-IVVDETMKTNIPNVFATGDANGLA--PY---YHAAVRMSIAAANNIMA 332 (466)
T ss_dssp SSS-BCCCTTCBCSSTTEEECGGGTCSC--CS---HHHHHHHHHHHHHHHHT
T ss_pred CCC-EeECCCccCCCCCEEEEEecCCCC--cc---HhHHHHHHHHHHHHHhC
Confidence 334 555555555668999999998762 21 36788999999888863
No 216
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.99 E-value=2.5e-10 Score=108.10 Aligned_cols=53 Identities=25% Similarity=0.246 Sum_probs=42.1
Q ss_pred eeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
+.+++..+...|.+.+++.|++++.++|+++... + .+.||.||+|+|.++..+
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~----------~--~~~a~~VV~A~G~~s~~l 189 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQRKVESFEEV----------A--REGADVIVNCTGVWAGAL 189 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHH----------H--HTTCSEEEECCGGGGGGT
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHh----------h--cCCCCEEEECCCcChHhh
Confidence 5788999999999999999999876666554322 1 267999999999988654
No 217
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.98 E-value=3.5e-10 Score=107.54 Aligned_cols=132 Identities=22% Similarity=0.289 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCC---------CCcCc---------H----------HHHHhc--
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---------NYGVW---------E----------DEFRDL-- 156 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~---------~~g~~---------~----------~~l~~~-- 156 (375)
.+||+|||||++|+++|++|+++|++|+|||+...... +-|.+ . +.+.++
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVELVP 85 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHHhCc
Confidence 58999999999999999999999999999998753220 00100 0 011111
Q ss_pred ---CCchh----hh-------hhc-cc---ceEEeCCCC-C---eeecCCceeecHHHHHHHHHHHHHHCCceEEEEEEE
Q 017240 157 ---GLEGC----IE-------HVW-RD---TVVYIDEDE-P---ILIGRAYGRVSRHLLHEELLRRCVESGVSYLSSKVE 214 (375)
Q Consensus 157 ---g~~~~----~~-------~~~-~~---~~~~~~~~~-~---~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~ 214 (375)
++... +. ..| .. ....++..+ + .-.....+.+++..+...|.+.+++.|++++.++|+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~~~v~ 165 (363)
T 1c0p_A 86 TGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVT 165 (363)
T ss_dssp TTSSEEEEEEEEEESSGGGGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred ccCCeEEECCEEEEecCccchhHHHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 11100 00 000 00 000010000 0 000001246899999999999999999998876666
Q ss_pred EEEEcCCceEEEEecCCeEEecCEEEEccCCCCcccc
Q 017240 215 SITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (375)
Q Consensus 215 ~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~ 251 (375)
++..+ .+ .||.||+|+|.++..+.
T Consensus 166 ~l~~~------------~~-~a~~VV~A~G~~s~~l~ 189 (363)
T 1c0p_A 166 SLEQA------------FD-GADLVVNATGLGAKSIA 189 (363)
T ss_dssp BGGGT------------CS-SCSEEEECCGGGGGTSB
T ss_pred cHhhc------------Cc-CCCEEEECCCcchhhcc
Confidence 55321 12 89999999999987654
No 218
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.98 E-value=5.7e-10 Score=109.35 Aligned_cols=109 Identities=12% Similarity=0.112 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCC-CcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~-~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
+||+|||||++|+++|..|++. |.+|+|||++...+.. .++ ...+. +. . .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-~~~~~--~~-------~-------~---------- 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGM-QLYLE--GK-------V-------K---------- 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGH-HHHHT--TS-------S-------C----------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccc-hhhhc--Cc-------c-------C----------
Confidence 4899999999999999999998 9999999988643211 010 00000 00 0 0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G~~s~ 248 (375)
+...+...+.+.+.+.|++++ ++.|+.++.+++ .+.+.. .+|+ ++.+|.+|+|||+.+.
T Consensus 54 ----~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 54 ----DVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEH-QVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp ----CGGGSBSCCHHHHHHTTCEEEETEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ----CHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCCC-EEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 000011111233456799997 999999877655 455544 3353 4899999999997543
No 219
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.98 E-value=1.5e-10 Score=112.90 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=71.7
Q ss_pred ccEEEECCCHHHHHHHHHHHH--CCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 108 LDLVVIGCGPAGLALAAESAK--LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~--~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
.||+|||||++|+++|+.|++ .|++|+|||++....... .+..... +.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~-~~~~~~~--g~--------------------------- 52 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP-AFPHLAM--GW--------------------------- 52 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG-GHHHHHH--TC---------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC-Ccchhcc--Cc---------------------------
Confidence 589999999999999999999 789999999985432111 0000000 00
Q ss_pred eeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.+...+...+.+.+++.|++++...|+.++.+.. .|++.++.++.+|.+|+|+|..+
T Consensus 53 --~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~---~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 53 --RKFEDISVPLAPLLPKFNIEFINEKAESIDPDAN---TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp --SCGGGSEEESTTTGGGGTEEEECSCEEEEETTTT---EEEETTCCEEECSEEEECCCCEE
T ss_pred --cCHHHHHHHHHHHHHhcCCEEEEEEEEEEECCCC---EEEECCCcEEECCEEEEcCCccc
Confidence 0011111122334456799999668988876654 67788888899999999999764
No 220
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.98 E-value=1.6e-08 Score=101.07 Aligned_cols=150 Identities=13% Similarity=0.129 Sum_probs=104.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|+++.. ....
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~l~~------------------------------------------ 247 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRG------------------------------------------ 247 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-cccc------------------------------------------
Confidence 469999999999999999999999999998742 1111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCC---ceEEEE--ecCC---eEEecCEEEEccCCCCccc-c------
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTS---GHRLVA--CEHD---MIVPCRLATVASGAASGKL-L------ 251 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~---~~~~V~--~~~g---~~i~a~~vI~A~G~~s~~~-~------ 251 (375)
+ ..++.+.+.+.+++.||+++ ++.++.+...++ +.+.|+ ..+| .++.+|.||+|+|..+... +
T Consensus 248 ~-d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~g 326 (519)
T 3qfa_A 248 F-DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVG 326 (519)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTT
T ss_pred C-CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcC
Confidence 1 12466777788888999999 888887765432 234443 3455 3578999999999655332 1
Q ss_pred -ccc-CceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 252 -EYE-EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 252 -~~~-~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
... ....+.++..+....++|+++||.+...... ...|+.++..+|+.|.
T Consensus 327 l~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~~~----~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 327 VKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVEL----TPVAIQAGRLLAQRLY 378 (519)
T ss_dssp CCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSCCC----HHHHHHHHHHHHHHHH
T ss_pred cEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCCcc----HHHHHHHHHHHHHHHc
Confidence 111 2344555555555668999999998432222 3677888888888775
No 221
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.98 E-value=5.3e-10 Score=109.75 Aligned_cols=111 Identities=11% Similarity=0.055 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCCCcC-cHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGV-WEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~~g~-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
+||+|||||++|+++|..|++. |.+|+|||++...+. .++ ....+. +. ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~~~~~~--g~-------~~----------------- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF-LSCGIALYLG--KE-------IK----------------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB-CGGGHHHHHT--TC-------BG-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc-ccccchhhhc--CC-------cc-----------------
Confidence 5899999999999999999998 999999998864321 111 000000 00 00
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec-C--CeEEecCEEEEccCCCCc
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H--DMIVPCRLATVASGAASG 248 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~-~--g~~i~a~~vI~A~G~~s~ 248 (375)
.++...+...+.+.+.+.|++++ ++.|+.++.+++ .+.+... + +.++.+|.+|+|||+.+.
T Consensus 54 --~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 54 --NNDPRGLFYSSPEELSNLGANVQMRHQVTNVDPETK-TIKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp --GGCGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGT-EEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred --cCCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCC-EEEEEecCCCceEEEECCEEEEccCCCcC
Confidence 00000111112334456799997 889999986655 4555431 2 467999999999996543
No 222
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.97 E-value=1.8e-08 Score=102.33 Aligned_cols=151 Identities=15% Similarity=0.103 Sum_probs=103.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||..|+.+|..|++.|.+|+|+++. .....
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~------------------------------------------ 323 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG------------------------------------------ 323 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc------------------------------------------
Confidence 37999999999999999999999999999976 21111
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEc------C--CceEEEE--ecCCeEEe--cCEEEEccCCCCccc-cc-
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES------T--SGHRLVA--CEHDMIVP--CRLATVASGAASGKL-LE- 252 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~------~--~~~~~V~--~~~g~~i~--a~~vI~A~G~~s~~~-~~- 252 (375)
+ ...+.+.+.+.+++.||+++ ++.++.+... + .+.+.++ ..+|+++. +|.||+|+|..+..- +.
T Consensus 324 ~-d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~ 402 (598)
T 2x8g_A 324 F-DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLC 402 (598)
T ss_dssp S-CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBC
T ss_pred C-CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCc
Confidence 1 12355667777788999999 8888777542 1 1234343 45675554 999999999765431 11
Q ss_pred ------ccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHH
Q 017240 253 ------YEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 306 (375)
Q Consensus 253 ------~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~ 306 (375)
..+...+.++..+....++|+++||.+..- |. -...|+.+|..+|..|..
T Consensus 403 ~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~-~~---~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 403 ETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGK-PQ---LTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp GGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTS-CC---CHHHHHHHHHHHHHHHHH
T ss_pred hhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCC-Cc---cHHHHHHhHHHHHHHHhc
Confidence 122334445555555567999999996432 21 236788899988888753
No 223
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.97 E-value=1.6e-09 Score=105.36 Aligned_cols=42 Identities=17% Similarity=0.058 Sum_probs=35.8
Q ss_pred HHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCC
Q 017240 202 VESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGA 245 (375)
Q Consensus 202 ~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~ 245 (375)
++.| +|+ +++|++|..+++ .+.|++.+|.++.||.||+|+|.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGD-VVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSS-SEEEEETTSCCEEEEEEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEcCC-eEEEEECCCCEEEeCEEEEecCc
Confidence 3457 999 999999987766 57788988878999999999994
No 224
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.96 E-value=5.3e-10 Score=108.29 Aligned_cols=104 Identities=20% Similarity=0.266 Sum_probs=70.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCCCCCCCC-cCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNNY-GVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~~~~~~~-g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
.+||+|||||++|+++|..|++.|. +|+|||++....... ......+.... .. .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~---------------~~--------~ 63 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD---------------AE--------K 63 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC---------------GG--------G
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc---------------hh--------h
Confidence 4899999999999999999999998 499999875432110 00001110000 00 0
Q ss_pred CceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 184 ~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
. .+. .+.+.|++++ +++|+.++.+.. .|++.+|.++.+|.+|+|||+.+.
T Consensus 64 ~--~~~----------~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 64 I--RLD----------CKRAPEVEWLLGVTAQSFDPQAH---TVALSDGRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp S--BCC----------CTTSCSCEEEETCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEEC
T ss_pred h--hHH----------HHHHCCCEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCCC
Confidence 0 010 2345789998 888999876543 677778888999999999997543
No 225
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.96 E-value=5.6e-10 Score=107.97 Aligned_cols=106 Identities=13% Similarity=0.156 Sum_probs=70.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCCCCCCC-CcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~~~~~~-~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.||+|||||++|+++|..|++.|+ +|+|||++....-. ..+. ...... .
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~-------------~~~l~~------~--------- 53 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLS-------------KAYLKS------G--------- 53 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGG-------------TGGGGS------C---------
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCC-------------HHHHCC------C---------
Confidence 489999999999999999999999 89999988633211 0000 000000 0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.....+.....+.+.+.+++++.++|+.++.+.. .|++.+|.++.+|.+|+|||+.+
T Consensus 54 ---~~~~~~~~~~~~~~~~~~i~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 54 ---GDPNSLMFRPEKFFQDQAIELISDRMVSIDREGR---KLLLASGTAIEYGHLVLATGARN 110 (404)
T ss_dssp ---CCTTSSBSSCHHHHHHTTEEEECCCEEEEETTTT---EEEESSSCEEECSEEEECCCEEE
T ss_pred ---CCHHHccCCCHHHHHhCCCEEEEEEEEEEECCCC---EEEECCCCEEECCEEEEeeCCCc
Confidence 0000011112233456789988788888876654 67788888999999999999643
No 226
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.96 E-value=1.1e-08 Score=102.21 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=106.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||||.+|+.+|..|++.|.+|+++++.+...
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-------------------------------------------- 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC--------------------------------------------
Confidence 479999999999999999999999999999764221
Q ss_pred ecHHHHHHHHHHHHHH-CCceEE-EEEEEEEEEcCCceEEEEecC---C--eEEecCEEEEccCCCCcc-ccc----ccC
Q 017240 188 VSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAASGK-LLE----YEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~V~~~~---g--~~i~a~~vI~A~G~~s~~-~~~----~~~ 255 (375)
. ...+.+.+.+ .||+++ ++.++++..+++....|.+.+ | .++.+|.||+|+|..+.. +.. ...
T Consensus 392 ~-----~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~ 466 (521)
T 1hyu_A 392 A-----DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNR 466 (521)
T ss_dssp S-----CHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCT
T ss_pred c-----CHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCC
Confidence 0 0234445555 599999 999999987655344555543 4 368999999999965432 211 122
Q ss_pred ceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 256 WSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 256 ~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
.+.+.++.......++|+++||.+..... -+..|+.+|..+|..+..+|.+
T Consensus 467 ~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 467 MGEIIIDAKCETSVKGVFAAGDCTTVPYK----QIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp TSCBCCCTTCBCSSTTEEECSTTBCCSSC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEeCCCCCCCCCCEEEeecccCCCcc----eeeehHHhHHHHHHHHHHHHHh
Confidence 33344444444556799999999865322 2578899999999999888754
No 227
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.96 E-value=3.2e-09 Score=104.54 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 192 LLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.+.+.|.+.+.+.|++|+ ++.|++|..++++.+.|++.++ ++.||.||+|++.+.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~-~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDS-SLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSC-EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCe-EEEcCEEEECCCHHH
Confidence 367777778888899999 9999999887664478877544 799999999998653
No 228
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.95 E-value=1.6e-09 Score=108.32 Aligned_cols=159 Identities=13% Similarity=0.088 Sum_probs=86.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC---cCcHH-HHHhcC-CchhhhhhcccceEEeCCCCCee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GVWED-EFRDLG-LEGCIEHVWRDTVVYIDEDEPIL 180 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~---g~~~~-~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
..+||+|||||++|+++|+.|++.|++|+|||++...+..+ |+.+. .+.... ..... +......+ +.. .
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~-~~~~~~g~-~~~----~ 115 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLA-RTFSGQYW-FPD----M 115 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHH-HHTTTSTT-CCC----C
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHH-hhhhhcCc-HHH----H
Confidence 35899999999999999999999999999999986443221 21111 000000 00000 00000000 000 0
Q ss_pred ecCCceeecHHHHHHHHH-------HHH-----HHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 181 IGRAYGRVSRHLLHEELL-------RRC-----VESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 181 ~~~~~~~v~~~~l~~~L~-------~~~-----~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.. ..++...+...+. +.+ .+.|++++ ...++.+.. . .|.+. +.++.+|.+|+|||+.+
T Consensus 116 ~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~---~v~~~-g~~~~~d~lViATGs~p 186 (523)
T 1mo9_A 116 TE---KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--H---TVEAA-GKVFKAKNLILAVGAGP 186 (523)
T ss_dssp TT---CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--T---EEEET-TEEEEBSCEEECCCEEC
T ss_pred Hh---hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--C---EEEEC-CEEEEeCEEEECCCCCC
Confidence 00 0112334444433 344 56799998 888877753 2 34444 66899999999999754
Q ss_pred ccc--ccccCceeeecC--C-CCCccC-CCEEEEccCC
Q 017240 248 GKL--LEYEEWSYIPVG--G-SLPNTE-QRNLAFGAAA 279 (375)
Q Consensus 248 ~~~--~~~~~~~~~p~~--~-~~~~~~-~~v~liGdaa 279 (375)
..+ .......++... . .+...+ +++++||.+.
T Consensus 187 ~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG~ 224 (523)
T 1mo9_A 187 GTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSK 224 (523)
T ss_dssp CCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCSH
T ss_pred CCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCCH
Confidence 332 111111122211 1 122334 8899999764
No 229
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.95 E-value=2.7e-10 Score=110.23 Aligned_cols=105 Identities=19% Similarity=0.152 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHHH---CCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~---~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.||+|||||++|+++|..|++ .|++|+|||++......... . +. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~----------~------------~~----------~ 49 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL----------P------------HV----------A 49 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS----------C------------CC----------C
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch----------h------------hc----------c
Confidence 489999999999999999999 89999999988532111000 0 00 0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCC----eEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD----MIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g----~~i~a~~vI~A~G~~s 247 (375)
.+..+..++...+.+.+.+.|++++..+|+.++.++. .|++.++ .++.+|.||+|+|..+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~---~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 50 IGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSS---MVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp SSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTT---EEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred cCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCC---EEEEccCCcccceeeCCEEEECCCCCc
Confidence 0001111122334555667899999559999987655 3445444 2499999999999754
No 230
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.94 E-value=1.3e-09 Score=108.27 Aligned_cols=51 Identities=6% Similarity=0.036 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASG 244 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G 244 (375)
..+.+.|.+.+.+.|++++ ++.|++|..+++ .|++.+|+++.||.||.+.-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~---~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNK---TVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTT---EEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCC---EEEEcCCCEEECCEEEECCC
Confidence 4577778888888899999 999999987765 56788999999999998755
No 231
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.94 E-value=3.7e-09 Score=112.95 Aligned_cols=109 Identities=23% Similarity=0.253 Sum_probs=72.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+||+||||||||+++|..|++.|++|+|||++...+..+- . . . ...++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~---~-----~-~----------k~~i~------------ 176 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL---D-----T-A----------GEQID------------ 176 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG---G-----S-S----------CCEET------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec---c-----C-C----------ccccC------------
Confidence 58999999999999999999999999999999865442210 0 0 0 00000
Q ss_pred eecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcCCceEEE---------Ee------cCCeEEecCEEEEccCCCC
Q 017240 187 RVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLV---------AC------EHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~V---------~~------~~g~~i~a~~vI~A~G~~s 247 (375)
.....++...+.+.+.+. +++++ ++.|..+...+. ...+ .+ .++.++.+|.||+|||+..
T Consensus 177 ~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~-~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 177 GMDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANY-LIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp TEEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTE-EEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCc-eeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 012334556666666664 89999 999988864321 1111 11 1124789999999999754
No 232
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.94 E-value=8.9e-09 Score=96.63 Aligned_cols=150 Identities=17% Similarity=0.194 Sum_probs=102.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||+|+.|+.+|..|++.|.+|+++++......
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~------------------------------------------- 192 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA------------------------------------------- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-------------------------------------------
Confidence 5799999999999999999999999999997743210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CC--eEEecCEEEEccCCCCcc-ccc----ccCc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASGK-LLE----YEEW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g--~~i~a~~vI~A~G~~s~~-~~~----~~~~ 256 (375)
...+.+ +.+++.||+++ ++.|+++..+++ ...|.+. +| .++.+|.||+|+|..+.. +.. ..+.
T Consensus 193 --~~~~~~---~~~~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~ 266 (335)
T 2a87_A 193 --SKIMLD---RARNNDKIRFLTNHTVVAVDGDTT-VTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPD 266 (335)
T ss_dssp --CTTHHH---HHHHCTTEEEECSEEEEEEECSSS-CCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTT
T ss_pred --cHHHHH---HHhccCCcEEEeCceeEEEecCCc-EeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCC
Confidence 001111 12245799999 999999986643 3234333 34 579999999999965432 111 1223
Q ss_pred eeeecCCC-CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 257 SYIPVGGS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 257 ~~~p~~~~-~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
..+.++.. .....++|+++||.+... +. ....|+.+|..+|..+...+.+
T Consensus 267 G~i~vd~~~~~t~~~~iya~GD~~~~~-~~---~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 267 GYVLVQGRTTSTSLPGVFAAGDLVDRT-YR---QAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp SCBCCSTTSSBCSSTTEEECGGGTCCS-CC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEeCCCCCccCCCCEEEeeecCCcc-HH---HHHHHHHhHHHHHHHHHHHhhc
Confidence 33444332 233467899999998653 22 2467888999999999888864
No 233
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.94 E-value=9.1e-10 Score=107.66 Aligned_cols=140 Identities=15% Similarity=0.129 Sum_probs=80.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
+||||||||||+++|..|++.| .+|+|||++....-..+.....+.. .... .... -
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~---------~~~~------------~~~~-~ 59 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGE---------VVED------------RRYA-L 59 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTT---------SSCC------------GGGT-B
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcC---------Cccc------------hhhh-h
Confidence 6999999999999999999998 4699999875332111111111000 0000 0000 0
Q ss_pred eecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec---CCeEEecCEEEEccCCCCcccccccCceeeecC
Q 017240 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDMIVPCRLATVASGAASGKLLEYEEWSYIPVG 262 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~~i~a~~vI~A~G~~s~~~~~~~~~~~~p~~ 262 (375)
..... +..++.|++++ +++|+.++.... .+.+... ++.++.+|.+|+|||+.+..+ +.+....+...
T Consensus 60 ~~~~~-------~~~~~~~i~~~~~~~V~~id~~~~-~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p-~i~g~~~~~~~ 130 (437)
T 4eqs_A 60 AYTPE-------KFYDRKQITVKTYHEVIAINDERQ-TVSVLNRKTNEQFEESYDKLILSPGASANSL-GFESDITFTLR 130 (437)
T ss_dssp CCCHH-------HHHHHHCCEEEETEEEEEEETTTT-EEEEEETTTTEEEEEECSEEEECCCEEECCC-CCCCTTEECCS
T ss_pred hcCHH-------HHHHhcCCEEEeCCeEEEEEccCc-EEEEEeccCCceEEEEcCEEEECCCCccccc-cccCceEEeec
Confidence 01111 22345789998 899999987665 4444432 235789999999999764332 22221111111
Q ss_pred CC----------CCccCCCEEEEccCC
Q 017240 263 GS----------LPNTEQRNLAFGAAA 279 (375)
Q Consensus 263 ~~----------~~~~~~~v~liGdaa 279 (375)
.. ....+++++++|.+.
T Consensus 131 ~~~~~~~l~~~~~~~~~~~vvViGgG~ 157 (437)
T 4eqs_A 131 NLEDTDAIDQFIKANQVDKVLVVGAGY 157 (437)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECCSH
T ss_pred cHHHHHHHHHhhhccCCcEEEEECCcc
Confidence 00 012367899999875
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.93 E-value=1.8e-09 Score=106.52 Aligned_cols=116 Identities=14% Similarity=0.136 Sum_probs=62.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
+||+|||||++|+++|..|++. |.+|+|||++....-. ..+++......+.. ... . .+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~---------~~gl~~~~~g~~~~------~~~---~-~~- 63 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG---------GCGIPYYVSGEVSN------IES---L-QA- 63 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc---------ccccchhhcCCCCc------hHH---h-cc-
Confidence 6999999999999999999999 8999999998653210 00110000000000 000 0 00
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G~~s 247 (375)
.+..+...+.......|++++ +++|+.++.+.+ .+.+.. .+|. ++.+|.+|+|+|..+
T Consensus 64 ---~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 64 ---TPYNVVRDPEFFRINKDVEALVETRAHAIDRAAH-TVEIENLRTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp --------------------CEEECSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---ccchhccCHHHHhhhcCcEEEECCEEEEEECCCC-EEEEeecCCCCEEEEECCEEEEeCCCCc
Confidence 001123333333345789998 999999987765 455544 2353 799999999999643
No 235
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.90 E-value=6.9e-09 Score=102.23 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
.+||+|||||++||++|+.|++.|++|+|+|+....+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 4899999999999999999999999999999986543
No 236
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.90 E-value=1.1e-08 Score=101.24 Aligned_cols=55 Identities=9% Similarity=0.151 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHCC-ceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 192 LLHEELLRRCVESG-VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 192 ~l~~~L~~~~~~~g-v~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.+.+.|.+.+.+.| ++|+ +++|++|..+++ .+.|++.+|+++.||.||+|+|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-AARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-SEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-EEEEEECCCCEEEcCEEEECCCHHH
Confidence 45666777777777 9999 999999988766 5788888888899999999999643
No 237
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.89 E-value=1.7e-09 Score=104.03 Aligned_cols=141 Identities=13% Similarity=0.048 Sum_probs=100.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+......
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~----------------------------------------- 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ----------------------------------------- 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 479999999999999999999999999999875332110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-ccc---ccCceeeecC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLE---YEEWSYIPVG 262 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~---~~~~~~~p~~ 262 (375)
+ ...+.+.+.+.+++.||+++ ++.|+++ |.++.+|.||+|+|..+.. +.. +....-+.++
T Consensus 186 ~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~gi~vd 250 (385)
T 3klj_A 186 L-DRDGGLFLKDKLDRLGIKIYTNSNFEEM--------------GDLIRSSCVITAVGVKPNLDFIKDTEIASKRGILVN 250 (385)
T ss_dssp S-CHHHHHHHHHHHHTTTCEEECSCCGGGC--------------HHHHHHSEEEECCCEEECCGGGTTSCCCBSSSEEEC
T ss_pred c-CHHHHHHHHHHHHhCCCEEEeCCEEEEc--------------CeEEecCeEEECcCcccChhhhhhcCCCcCCCEEEC
Confidence 1 12466677778888999999 8777544 4568899999999976542 211 1111114445
Q ss_pred CCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 263 GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 263 ~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
..+....++|+++||.+...++..+ -...|..+|..+|..|.
T Consensus 251 ~~~~t~~~~IyA~GD~a~~~~~~~~-~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 251 DHMETSIKDIYACGDVAEFYGKNPG-LINIANKQGEVAGLNAC 292 (385)
T ss_dssp TTCBCSSTTEEECGGGEEETTBCCC-CHHHHHHHHHHHHHHHT
T ss_pred CCcccCCCCEEEEEeeEecCCCccc-HHHHHHHHHHHHHHHhc
Confidence 5555567899999999876554333 24678888888888875
No 238
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.89 E-value=1.7e-10 Score=113.35 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=66.6
Q ss_pred cccEEEECCCHHHHHHHHHHHH-C------CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCe
Q 017240 107 ILDLVVIGCGPAGLALAAESAK-L------GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~-~------G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 179 (375)
.+||+||||||+|+++|..|++ . |++|+|||+.+.. +|.+. .++. +.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~---gg~~~-----~gv~--------------p~---- 56 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP---WGLVR-----SGVA--------------PD---- 56 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC---STHHH-----HTSC--------------TT----
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC---CCccc-----cccC--------------CC----
Confidence 4799999999999999999999 7 9999999987543 23221 1110 00
Q ss_pred eecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 180 ~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
......+...+.+.+.+.|++++ +..+ . . .|++.++ ++.+|.||+|+|+.+
T Consensus 57 -------~~~~~~~~~~~~~~~~~~~v~~~~~v~v-----~-~---~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 57 -------HPKIKSISKQFEKTAEDPRFRFFGNVVV-----G-E---HVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp -------CTGGGGGHHHHHHHHTSTTEEEEESCCB-----T-T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEeeEEE-----C-C---EEEECCC-eEeCCEEEEeeCCCC
Confidence 01112355566677777899988 6432 1 2 2444555 578999999999864
No 239
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.87 E-value=3.7e-09 Score=104.94 Aligned_cols=109 Identities=21% Similarity=0.282 Sum_probs=74.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+||+|||||++|+++|+.|++. ++|+|||++...+..+-. . .... .+.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~---~----------------~~~~--------~g~~- 157 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL---K----------------GIKQ--------EGFN- 157 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG---T----------------CSEE--------TTTT-
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec---c----------------cccc--------CCCC-
Confidence 358999999999999999999999 999999998654322100 0 0000 0000
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-cCCe--EEecCEEEEccCCCC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-~~g~--~i~a~~vI~A~G~~s 247 (375)
. +..++...+.+.+ +.|++++ ++.|.++..+++ .+.+.. .++. ++.+|.+|+|+|+..
T Consensus 158 -~-~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~-~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 158 -K-DSRKVVEELVGKL-NENTKIYLETSALGVFDKGE-YFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp -E-EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSS-SEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred -C-CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCc-EEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 0 3444555555555 6699998 999999887665 344433 4453 689999999999754
No 240
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.87 E-value=7.6e-10 Score=114.37 Aligned_cols=98 Identities=20% Similarity=0.188 Sum_probs=67.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
...+||+||||||+|+++|+.|++.|++|+|||+....+.. +... . .++
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~---~~~~-~--~~p------------------------- 437 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR---VTQE-S--ALP------------------------- 437 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH---HHHH-H--TST-------------------------
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE---eeec-c--CCC-------------------------
Confidence 34689999999999999999999999999999998644321 1100 0 000
Q ss_pred ceeecHHHHHHHHHHHHHHC-CceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
+..+...+..++.+.+.+. |++++ ++.| +..++.++.+|.||+|+|+..
T Consensus 438 -~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v-------------~~~~~~~~~~d~lvlAtG~~~ 488 (690)
T 3k30_A 438 -GLSAWGRVKEYREAVLAELPNVEIYRESPM-------------TGDDIVEFGFEHVITATGATW 488 (690)
T ss_dssp -TCGGGGHHHHHHHHHHHTCTTEEEESSCCC-------------CHHHHHHTTCCEEEECCCEEE
T ss_pred -chhHHHHHHHHHHHHHHHcCCCEEEECCee-------------cHHHHhhcCCCEEEEcCCCcc
Confidence 0112335677777777776 89888 6432 223344678999999999763
No 241
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.86 E-value=1.7e-08 Score=99.36 Aligned_cols=40 Identities=5% Similarity=0.006 Sum_probs=35.0
Q ss_pred ceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 206 VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 206 v~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
++|+ ++.|++|..+++ .+.|++.+| ++.||.||+|++.+.
T Consensus 249 ~~i~~~~~V~~i~~~~~-~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDG-RYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETT-EEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCC-EEEEEECCC-eEECCEEEECCCHHH
Confidence 6899 999999998776 688999888 899999999999653
No 242
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.84 E-value=1.5e-08 Score=101.04 Aligned_cols=43 Identities=14% Similarity=0.056 Sum_probs=36.9
Q ss_pred CCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 204 SGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 204 ~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
.|++|+ ++.|++|..+++ .+.|++.+|+++.||.||+|++...
T Consensus 225 lg~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTRE-NVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HGGGEESSCCEEEEECSSS-SEEEEETTSCEEEESEEEECSCGGG
T ss_pred cCCcEEcCCeeEEEEECCC-eEEEEECCCeEEEeCEEEECCCHHH
Confidence 478899 999999987766 5778888898999999999999654
No 243
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.82 E-value=1.7e-09 Score=107.29 Aligned_cols=130 Identities=17% Similarity=0.184 Sum_probs=72.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCC-C--ee
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDE-P--IL 180 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~--~~ 180 (375)
..+||||||||+||+++|..|++. |.+|+|||++...+.........+- .+........ ..+..-.. . ..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~-~~~~~~~~~~----~~~~~~~~~~~~~~ 84 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW-FSDDPNVTKT----LRFKQWNGKERSIY 84 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGG-CC--CTHHHH----CEEECTTSCEEESB
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhh-cCCccchhhc----cccccccccccccc
Confidence 358999999999999999999887 8899999988543311100000000 0000000000 00000000 0 00
Q ss_pred ecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc
Q 017240 181 IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (375)
Q Consensus 181 ~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~ 248 (375)
+.......+...+. .+.+.|++++ ++.|+.++.... .|++.+|.++.+|.||+|||+.+.
T Consensus 85 ~~~~~~~~~~~~l~-----~~~~~gv~~~~g~~v~~id~~~~---~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 85 FQPPSFYVSAQDLP-----HIENGGVAVLTGKKVVQLDVRDN---MVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp SSCGGGSBCTTTTT-----TSTTCEEEEEETCCEEEEEGGGT---EEEETTSCEEEEEEEEECCCEEEC
T ss_pred ccchHhhcchhhhh-----hhhcCCeEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCCC
Confidence 00000001111111 1234689999 889999987654 677888888999999999997543
No 244
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.81 E-value=1.9e-09 Score=111.03 Aligned_cols=127 Identities=17% Similarity=0.164 Sum_probs=77.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
...+||+||||||||+++|..|++.|++|+|||+....+..+.. .. .+ ...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~-----~~-~~---------------~~~-------- 421 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNI-----AK-QI---------------PGK-------- 421 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHH-----HT-TS---------------TTC--------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeec-----cc-cC---------------CCH--------
Confidence 34589999999999999999999999999999998654322210 00 00 000
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEE-ecCEEEEccCCCCccc--ccccCceeee
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIV-PCRLATVASGAASGKL--LEYEEWSYIP 260 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i-~a~~vI~A~G~~s~~~--~~~~~~~~~p 260 (375)
..-..+...+.+.+++.|++++ ++.|+. ..+ .+|.||+|||+.+..+ .......++.
T Consensus 422 ---~~~~~~~~~~~~~~~~~gv~~~~~~~v~~----------------~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~ 482 (671)
T 1ps9_A 422 ---EEFYETLRYYRRMIEVTGVTLKLNHTVTA----------------DQLQAFDETILASGIVPRTPPIDGIDHPKVLS 482 (671)
T ss_dssp ---TTHHHHHHHHHHHHHHHTCEEEESCCCCS----------------SSSCCSSEEEECCCEEECCCCCBTTTSTTEEE
T ss_pred ---HHHHHHHHHHHHHHHHcCCEEEeCcEecH----------------HHhhcCCEEEEccCCCcCCCCCCCCCCCcEee
Confidence 0112344556677777899988 654421 123 8999999999754322 1111111222
Q ss_pred cC---CCCCccCCCEEEEccCC
Q 017240 261 VG---GSLPNTEQRNLAFGAAA 279 (375)
Q Consensus 261 ~~---~~~~~~~~~v~liGdaa 279 (375)
.. ......++++++||.+.
T Consensus 483 ~~~~l~~~~~~~~~VvVIGgG~ 504 (671)
T 1ps9_A 483 YLDVLRDKAPVGNKVAIIGCGG 504 (671)
T ss_dssp HHHHHTSCCCCCSEEEEECCHH
T ss_pred HHHHhhCCCCCCCeEEEECCCh
Confidence 10 11123467899999764
No 245
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.79 E-value=4.5e-09 Score=104.46 Aligned_cols=110 Identities=15% Similarity=0.254 Sum_probs=69.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
...|||||||+||+++|..|++.+++|+|||+++.. .|...|.+.. .|
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-----~~~PlL~~va---------------------------~G 89 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-----LFTPLLPSAP---------------------------VG 89 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-----ECGGGGGGTT---------------------------TT
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-----ccccchhHHh---------------------------hc
Confidence 458999999999999999999999999999987421 1111111100 01
Q ss_pred eecHHHHHHHHHHHH--HHCCceEEEEEEEEEEEcCCceEEEEe------------------cCCeEEecCEEEEccCCC
Q 017240 187 RVSRHLLHEELLRRC--VESGVSYLSSKVESITESTSGHRLVAC------------------EHDMIVPCRLATVASGAA 246 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~--~~~gv~i~~~~v~~i~~~~~~~~~V~~------------------~~g~~i~a~~vI~A~G~~ 246 (375)
.++...+..-+.+.+ .+.+++++..+|++|+.+.. .+.+.. .++.++.+|++|+|+|+.
T Consensus 90 ~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~~ID~~~k-~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~ 168 (502)
T 4g6h_A 90 TVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRN-TVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAE 168 (502)
T ss_dssp SSCGGGGEEEHHHHHTTCSSCEEEEEEEEEEEEGGGT-EEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCE
T ss_pred cccHHHhhhhHHHHHHhhcCCeEEEEEEEEEEEhhhC-EEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcc
Confidence 111111111111211 23578888889999987766 444432 235689999999999976
Q ss_pred Ccc
Q 017240 247 SGK 249 (375)
Q Consensus 247 s~~ 249 (375)
+..
T Consensus 169 ~~~ 171 (502)
T 4g6h_A 169 PNT 171 (502)
T ss_dssp ECC
T ss_pred ccc
Confidence 543
No 246
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.79 E-value=4.1e-08 Score=95.94 Aligned_cols=37 Identities=35% Similarity=0.509 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
..+||+|||||++||++|+.|++.|++|+|+|++...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 3589999999999999999999999999999987543
No 247
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.79 E-value=2.4e-08 Score=97.96 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=99.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCc-EEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~-V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+|+|||||.+|+-+|..+.+.|.+ |+++++..... +..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~--~p~------------------------------------- 304 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN--MPG------------------------------------- 304 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT--CSS-------------------------------------
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC--CCC-------------------------------------
Confidence 35799999999999999999999984 99998764321 000
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe------------------cCC--eEEecCEEEEccC
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC------------------EHD--MIVPCRLATVASG 244 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~------------------~~g--~~i~a~~vI~A~G 244 (375)
. ..+ .+.+++.||+++ ++.++++..++. ...|++ .+| .++.+|.||+|+|
T Consensus 305 --~-~~e-----~~~~~~~Gv~~~~~~~~~~i~~~g~-v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G 375 (456)
T 2vdc_G 305 --S-QRE-----VAHAEEEGVEFIWQAAPEGFTGDTV-VTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALG 375 (456)
T ss_dssp --C-HHH-----HHHHHHTTCEEECCSSSCCEEEEEE-EETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSC
T ss_pred --C-HHH-----HHHHHHCCCEEEeCCCceEEeCCCc-EEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCC
Confidence 0 111 234566788888 776666653211 111111 023 4789999999999
Q ss_pred CCCcc---ccc-----ccCceeeecCCC-CCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 245 AASGK---LLE-----YEEWSYIPVGGS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 245 ~~s~~---~~~-----~~~~~~~p~~~~-~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
..+.. +.. ...+..+.++.. +....++|+++||...... -+..|+.+|..+|..|..+|.+
T Consensus 376 ~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~-----~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 376 FEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS-----LVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp EECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC-----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch-----HHHHHHHHHHHHHHHHHHHhhc
Confidence 65532 211 123344444433 4445678999999876532 2588999999999999998865
No 248
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.78 E-value=8e-08 Score=92.77 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccccc-----c-cCceeeecCCC
Q 017240 192 LLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE-----Y-EEWSYIPVGGS 264 (375)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~-----~-~~~~~~p~~~~ 264 (375)
.+.+.+.+.+++.||+++ ++.|++++.+ .|++.+|+++.+|.||+|+|..+..... + .....++++..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-----~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~ 293 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH-----EIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLN 293 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS-----EEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC-----eEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcc
Confidence 467778888888999999 8999988643 3777888899999999999976543321 1 12334555544
Q ss_pred CCc-cCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 265 LPN-TEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 265 ~~~-~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
+.. ..++|+++||.+..-.|..+ ..|..+|..+|..|...+..+
T Consensus 294 ~~~~~~~~vfa~GD~~~~~~~~~~---~~A~~q~~~aa~~i~~~l~~~ 338 (409)
T 3h8l_A 294 MVSIKYDNVYAVGDANSMTVPKLG---YLAVMTGRIAAQHLANRLGVP 338 (409)
T ss_dssp SBBSSCTTEEECGGGBTTCCSCCH---HHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCCEEEeehhccCCCCcHH---HHHHHHHHHHHHHHHHHhcCC
Confidence 444 46799999999986555544 678999999999999988443
No 249
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.76 E-value=8e-08 Score=93.51 Aligned_cols=114 Identities=13% Similarity=0.158 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec--CCeEEecCEEEEccCCCCccc-cc----c-cCce-eeecC
Q 017240 193 LHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HDMIVPCRLATVASGAASGKL-LE----Y-EEWS-YIPVG 262 (375)
Q Consensus 193 l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~--~g~~i~a~~vI~A~G~~s~~~-~~----~-~~~~-~~p~~ 262 (375)
+...+.+.+++.||+++ ++.|++++.+ .+.++.. ++.++.+|.||+|+|..+... .. + .+.. .++++
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~---~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd 278 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD---KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVN 278 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS---EEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC---eEEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecC
Confidence 45667777888999999 9999998643 3333321 267899999999999654322 11 1 2234 55655
Q ss_pred CCCCc-cCCCEEEEccCCCCCC----------CCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 263 GSLPN-TEQRNLAFGAAASMVH----------PATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 263 ~~~~~-~~~~v~liGdaa~~~~----------p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
..+.. ..++|+++||++...+ |.++ ..|..+|..+|+.|...+.+..
T Consensus 279 ~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~---~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 279 RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTG---MMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCH---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchH---HHHHHHHHHHHHHHHHHhcCCC
Confidence 55554 5679999999988764 3344 6789999999999999997654
No 250
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.76 E-value=1e-09 Score=108.00 Aligned_cols=98 Identities=17% Similarity=0.234 Sum_probs=67.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC--CcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
.+||+||||||+|+.+|..|++.| ++|+|||+.+.. +|.|. .++.. .
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~---gg~~~-----~g~~p---------------~-------- 54 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP---FGLVR-----FGVAP---------------D-------- 54 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS---CTHHH-----HTSCT---------------T--------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC---Cceee-----cccCC---------------C--------
Confidence 479999999999999999999998 999999987543 23321 11100 0
Q ss_pred ceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCC
Q 017240 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (375)
Q Consensus 185 ~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s 247 (375)
+ .....+...+.+.+++.|++++ ++.|. . .|++.+. ++.+|.||+|||+..
T Consensus 55 ~--~~~~~~~~~~~~~~~~~gv~~~~~~~v~------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 55 H--PEVKNVINTFTQTARSDRCAFYGNVEVG------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp C--GGGGGHHHHHHHHHTSTTEEEEBSCCBT------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred C--ccHHHHHHHHHHHHHhCCcEEEeeeEEe------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 0 0112355667777778899998 76551 1 2333333 478999999999874
No 251
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.75 E-value=1.2e-07 Score=93.05 Aligned_cols=189 Identities=11% Similarity=0.059 Sum_probs=101.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCCCCCCCcC-------cH---HHHHhcCCchhhhhhcccceEEeC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGV-------WE---DEFRDLGLEGCIEHVWRDTVVYID 174 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~~~~~~g~-------~~---~~l~~~g~~~~~~~~~~~~~~~~~ 174 (375)
..+|+|||||.+|+.+|..|++. |.+|++|++...+...... .. +.+..+.... .......
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~-~~~~~~~------ 299 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAE-RERLLRE------ 299 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHH-HHHHHHH------
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHH-HHHHHHH------
Confidence 36899999999999999999999 8999999987643211000 00 0011100000 0000000
Q ss_pred CCCCeeecCCceeecHH----HHHHHHHHHHHH-CCceEE-EEEEEEEEEcCCceEEEEec---CCe--EEecCEEEEcc
Q 017240 175 EDEPILIGRAYGRVSRH----LLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVAS 243 (375)
Q Consensus 175 ~~~~~~~~~~~~~v~~~----~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~V~~~---~g~--~i~a~~vI~A~ 243 (375)
.....+..++.. .+...+.+.+.. .|++++ ++.|+++..+++ .+.|++. +|+ ++.+|.||+|+
T Consensus 300 -----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~-~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 300 -----YHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQ-GIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp -----TGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETT-EEEEEEEETTTCCEEEEEESEEEECC
T ss_pred -----hhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCC-EEEEEEEEcCCCCeEEEECCEEEEee
Confidence 000011112222 122222222222 689999 999999988766 5667765 564 59999999999
Q ss_pred CCCCccccc----ccCc-eeeecCCCCC-----ccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHH
Q 017240 244 GAASGKLLE----YEEW-SYIPVGGSLP-----NTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308 (375)
Q Consensus 244 G~~s~~~~~----~~~~-~~~p~~~~~~-----~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l 308 (375)
|..+....+ +... ..+.+...+. ...++|+++||+.+........--..+.+.+.+++..+....
T Consensus 374 G~~p~~~~~~l~~l~~~~g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 374 GYERQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp CEECCC-CTTTGGGGGGBC--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCccchhHHHHHHhCCcccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHhhcC
Confidence 976551111 1111 1122222221 113469999998754332221222456677776666555443
No 252
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.75 E-value=9.6e-08 Score=93.15 Aligned_cols=158 Identities=18% Similarity=0.213 Sum_probs=105.5
Q ss_pred cEEEECCCHHH------HHHH----HHHHHCCCc-----EEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEe
Q 017240 109 DLVVIGCGPAG------LALA----AESAKLGLN-----VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYI 173 (375)
Q Consensus 109 DVvIIGgG~aG------l~aA----~~La~~G~~-----V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~ 173 (375)
+++|||+|+.| +..| ..|.+.|.+ |+++++.+.... .++ .
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~-~~l----------~-------------- 205 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGH-LGI----------Q-------------- 205 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTC-TTT----------T--------------
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccc-ccc----------C--------------
Confidence 57899997654 5555 666778875 999997753321 100 0
Q ss_pred CCCCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe--cC-----CeEEecCEEEEccCC
Q 017240 174 DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EH-----DMIVPCRLATVASGA 245 (375)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~--~~-----g~~i~a~~vI~A~G~ 245 (375)
.+. .+...+.+.+++.||+++ ++.|++++.+ .+.+.. .+ +.++.+|.+|+|+|.
T Consensus 206 -------------~~~--~~~~~~~~~l~~~gI~~~~~~~v~~v~~~---~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 206 -------------GVG--DSKGILTKGLKEEGIEAYTNCKVTKVEDN---KMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp -------------CCT--THHHHHHHHHHHTTCEEECSEEEEEEETT---EEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred -------------cch--HHHHHHHHHHHHCCCEEEcCCEEEEEECC---eEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 001 145566777788999999 9999998643 333332 23 567999999999985
Q ss_pred CCccc-cc----ccCceeeecCCCCCc-cCCCEEEEccCCCCCC----------CCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 246 ASGKL-LE----YEEWSYIPVGGSLPN-TEQRNLAFGAAASMVH----------PATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 246 ~s~~~-~~----~~~~~~~p~~~~~~~-~~~~v~liGdaa~~~~----------p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
..... .. ..+...++++..+.. ..++|+++||++...+ |.++ ..|..+|..+|+.|...+.
T Consensus 268 ~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~---~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 268 KGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTG---YMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp ECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCH---HHHHHHHHHHHHHHHHHTT
T ss_pred cCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHH---HHHHHHHHHHHHHHHHHhc
Confidence 43322 11 123445555555554 5679999999988764 3333 6789999999999999987
Q ss_pred cCC
Q 017240 310 HDH 312 (375)
Q Consensus 310 ~~~ 312 (375)
+..
T Consensus 345 g~~ 347 (437)
T 3sx6_A 345 GRK 347 (437)
T ss_dssp TSC
T ss_pred CCC
Confidence 654
No 253
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=8.3e-08 Score=94.19 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEE-cCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITE-STSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~-~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
..+.+.|.+.+++.|++++ ++.|++|.. +++..+.|++.+|+++.||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4678888888999999999 999999998 5554678999998889999999999976
No 254
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.70 E-value=3.6e-07 Score=98.24 Aligned_cols=149 Identities=15% Similarity=0.184 Sum_probs=101.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
+|+|||||..|+-+|..|++.|. +|+|+++....... .
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~-----------------------------------------~ 372 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR-----------------------------------------A 372 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC-----------------------------------------S
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC-----------------------------------------C
Confidence 89999999999999999999997 89999986410000 0
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEec------C-------C--eEEecCEEEEccCCCCcc--
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE------H-------D--MIVPCRLATVASGAASGK-- 249 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~------~-------g--~~i~a~~vI~A~G~~s~~-- 249 (375)
. ..++ +.+++.||+++ ++.++++..+++....|++. + | .++.+|.||+|.|...+.
T Consensus 373 ~-~~e~-----~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~ 446 (1025)
T 1gte_A 373 V-PEEV-----ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPK 446 (1025)
T ss_dssp C-HHHH-----HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHH
T ss_pred C-HHHH-----HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchh
Confidence 0 1111 34567899998 88888887644423334332 2 2 378999999999974421
Q ss_pred c-c-----cccCceeeecCC-CCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 250 L-L-----EYEEWSYIPVGG-SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 250 ~-~-----~~~~~~~~p~~~-~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
+ . ....+..+.++. .+....++|+++||.+.... -+..|+.+|..+|..|..+|.
T Consensus 447 l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~-----~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 447 VKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMAN-----TTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp HHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCch-----HHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 112334444443 34445679999999986432 247789999999999998876
No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.68 E-value=7.5e-09 Score=107.50 Aligned_cols=39 Identities=21% Similarity=0.311 Sum_probs=34.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
...+||+||||||||+++|+.|++.|++|+|||+....+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIG 425 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC
Confidence 345899999999999999999999999999999976543
No 256
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.68 E-value=1e-07 Score=99.20 Aligned_cols=41 Identities=17% Similarity=0.087 Sum_probs=35.9
Q ss_pred CCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCC
Q 017240 204 SGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGA 245 (375)
Q Consensus 204 ~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~ 245 (375)
.|++|+ ++.|++|..+++ .+.|++.+|.++.||.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~-~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGD-EVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSS-SEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCC-EEEEEECCCcEEEcCEEEECCCH
Confidence 478999 999999998776 57899988888999999999964
No 257
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.66 E-value=9.9e-08 Score=89.54 Aligned_cols=180 Identities=13% Similarity=0.041 Sum_probs=96.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-+|+|||+|.+|+.+|..|++.| +|+++.+..+...........+...-.+. +... ....+........ ...
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~---~~~ 235 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATER-WKAQ---QEGREPDLPPGGF---GDI 235 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-----------------------------CB
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHH-Hhcc---ccccCCCcccccc---cCc
Confidence 57999999999999999999998 79999876422111000001111100000 0000 0000000000000 000
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-cccc----cCceeeec
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLEY----EEWSYIPV 261 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~~----~~~~~~p~ 261 (375)
. +...+.+. .+.|+ +. ...+..+.. + .|.+.+|+++.+|.||.|+|..+.. +... .+...+.+
T Consensus 236 ~----~~~~~~~~-~~~g~-i~~~~~v~~~~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~v 304 (357)
T 4a9w_A 236 V----MVPPVLDA-RARGV-LAAVPPPARFSP--T---GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEV 304 (357)
T ss_dssp C----CCHHHHHH-HHTTC-CCEECCCSEEET--T---EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCB
T ss_pred c----cChhHHHH-HhcCc-eEEecCcceEeC--C---eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCccc
Confidence 1 11122222 23454 34 666666643 2 4778889899999999999976652 2211 12233444
Q ss_pred CCC--CCccCCCEEEEcc--CCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 262 GGS--LPNTEQRNLAFGA--AASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 262 ~~~--~~~~~~~v~liGd--aa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
+.. .....++++++|| .+. ..+.+ +..|..+|..+|+.|...+++
T Consensus 305 d~~~l~~t~~~~vya~Gd~d~~~-~~~~~---~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 305 DGSGLRALAVPSVWLLGYGDWNG-MASAT---LIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp CTTSCBBSSCTTEEECSSCGGGS-TTCSS---TTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCcccCCCCCCeEEeccccccc-cchhh---hhhhHHHHHHHHHHHHHHHHh
Confidence 444 4445679999995 443 12222 244889999999999988865
No 258
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.66 E-value=2.8e-08 Score=94.19 Aligned_cols=110 Identities=21% Similarity=0.207 Sum_probs=70.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC-------------C--CC---------cCcHHHHHhcCCchhhh
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-------------N--NY---------GVWEDEFRDLGLEGCIE 163 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~-------------~--~~---------g~~~~~l~~~g~~~~~~ 163 (375)
+||+|||||+||+.+|+.|++.|.+|+|||+++... + .+ |...+.++.+|-. +.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~--m~ 79 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSL--VM 79 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCH--HH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCCh--Hh
Confidence 699999999999999999999999999999865211 0 11 1122333333321 11
Q ss_pred hhcccceEEeCCCCCeeecCCceeecHHHHHHHHHHHHHH-CCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEc
Q 017240 164 HVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVA 242 (375)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A 242 (375)
+..+...+ +. + ....+||..+...+.+.+++ .++++++.+|+++. ++.||+|
T Consensus 80 ~~aD~~~i--pA------g-~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~------------------~~~vIia 132 (443)
T 3g5s_A 80 EAADLARV--PA------G-GALAVDREEFSGYITERLTGHPLLEVVREEVREIP------------------PGITVLA 132 (443)
T ss_dssp HHHHHSEE--CC------T-TEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC------------------SSSEEEC
T ss_pred hhhhhcCC--CC------C-ccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc------------------CCCEEEe
Confidence 11111111 10 1 11259999999999999987 57888866665542 4567777
Q ss_pred cCCC
Q 017240 243 SGAA 246 (375)
Q Consensus 243 ~G~~ 246 (375)
||..
T Consensus 133 tG~~ 136 (443)
T 3g5s_A 133 TGPL 136 (443)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7754
No 259
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.62 E-value=1.6e-07 Score=100.30 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=100.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|+.|+.+|..|++.|.+|+|||+.....
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------------- 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------------- 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------------------------------------------
Confidence 479999999999999999999999999999764210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEc-CCceEEEEecC-------C--eEEecCEEEEccCCCCccc-ccccC
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES-TSGHRLVACEH-------D--MIVPCRLATVASGAASGKL-LEYEE 255 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~-~~~~~~V~~~~-------g--~~i~a~~vI~A~G~~s~~~-~~~~~ 255 (375)
.. .+.+++.||+++ ++.|+++..+ +++...|++.+ | .++.+|.||+|+|..+..- ....
T Consensus 321 --~~------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~- 391 (965)
T 2gag_A 321 --AA------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR- 391 (965)
T ss_dssp --HH------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-
T ss_pred --hh------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-
Confidence 11 345667899999 9999999874 33233455443 4 6799999999999654321 1100
Q ss_pred ceeeecCCCCC-----ccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 256 WSYIPVGGSLP-----NTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 256 ~~~~p~~~~~~-----~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
...+.++.... ...++|+++||.+... ++..|+.+|..+|..|...+.
T Consensus 392 ~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 392 QGKLDWDTTIHAFVPADAVANQHLAGAMTGRL------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp TCCEEEETTTTEEEECSCCTTEEECGGGGTCC------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEcCcccccccCCCCCCEEEEEecCCch------hHHHHHHHHHHHHHHHHHHcC
Confidence 11111111111 2356899999988642 346899999999999988775
No 260
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.57 E-value=5e-07 Score=88.73 Aligned_cols=189 Identities=16% Similarity=0.116 Sum_probs=108.6
Q ss_pred ccEEEECCCHHHHHHHHHHH--------------------HCCC-cEEEECCCCCCCCCCcCcHHHHHhcC-Cchhhhhh
Q 017240 108 LDLVVIGCGPAGLALAAESA--------------------KLGL-NVGLIGPDLPFTNNYGVWEDEFRDLG-LEGCIEHV 165 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La--------------------~~G~-~V~liE~~~~~~~~~g~~~~~l~~~g-~~~~~~~~ 165 (375)
-.|+|||+|..|+-+|..|+ +.|. +|+||++..+....+ ...++.++. ++.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~f--t~~el~~l~~lp~----- 218 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAF--TIKELREMIQLPG----- 218 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCC--CHHHHHHHHTCTT-----
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhcc--CHHHHHHhhcCCC-----
Confidence 57999999999999999999 6787 699999876443222 122232211 110
Q ss_pred cccceEEeCCCCCe---eecCCceeecHHHHHHHHHHHHHH--------------CCceEE-EEEEEEEEEcC-C-ceEE
Q 017240 166 WRDTVVYIDEDEPI---LIGRAYGRVSRHLLHEELLRRCVE--------------SGVSYL-SSKVESITEST-S-GHRL 225 (375)
Q Consensus 166 ~~~~~~~~~~~~~~---~~~~~~~~v~~~~l~~~L~~~~~~--------------~gv~i~-~~~v~~i~~~~-~-~~~~ 225 (375)
....++..... ........ ....+.+.|.+.+.+ .||+++ ++.++.+..++ + ....
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 219 ---TRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp ---EEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred ---ceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 00000000000 00000000 012244555555554 789999 99999987653 2 2323
Q ss_pred EEec---------------CC--eEEecCEEEEccCCCCcccc---cccCceeeecCCCCCcc-CCCEEEEccCCCCCCC
Q 017240 226 VACE---------------HD--MIVPCRLATVASGAASGKLL---EYEEWSYIPVGGSLPNT-EQRNLAFGAAASMVHP 284 (375)
Q Consensus 226 V~~~---------------~g--~~i~a~~vI~A~G~~s~~~~---~~~~~~~~p~~~~~~~~-~~~v~liGdaa~~~~p 284 (375)
|++. +| +++.+|.||.|.|..+..+. ++.+...+.+....... .++++++||.+.....
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~ 374 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPIDPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG 374 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCCCTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCCCCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc
Confidence 4332 34 57999999999997765531 12211111112222233 3789999998854221
Q ss_pred CChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 285 ATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 285 ~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
.+..++.+|..+|..|...+..+
T Consensus 375 ----~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 375 ----VITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 14578999999999998888654
No 261
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.56 E-value=2.1e-08 Score=103.55 Aligned_cols=148 Identities=14% Similarity=0.139 Sum_probs=100.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 108 LDLVVIG--CGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 108 ~DVvIIG--gG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
-+|+||| +|..|+.+|..|++.|.+|+++++........
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------------- 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------------- 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG---------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc---------------------------------------
Confidence 4699999 99999999999999999999999775322110
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe---cCCeEEecCEEEEccCCCCcccccccCceeeec
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGAASGKLLEYEEWSYIPV 261 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~---~~g~~i~a~~vI~A~G~~s~~~~~~~~~~~~p~ 261 (375)
....+...+.+.+++.||+++ ++.|+++..+ ...+.. .+++++.+|.||+|+|..+..... .... ..
T Consensus 565 ---~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~---~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~-~~l~--~~ 635 (690)
T 3k30_A 565 ---NNTFEVNRIQRRLIENGVARVTDHAVVAVGAG---GVTVRDTYASIERELECDAVVMVTARLPREELY-LDLV--AR 635 (690)
T ss_dssp ---GGGTCHHHHHHHHHHTTCEEEESEEEEEEETT---EEEEEETTTCCEEEEECSEEEEESCEEECCHHH-HHHH--HH
T ss_pred ---ccchhHHHHHHHHHHCCCEEEcCcEEEEEECC---eEEEEEccCCeEEEEECCEEEECCCCCCChHHH-HHHh--hh
Confidence 011134566677778999999 9999999744 234442 345689999999999965432210 0000 00
Q ss_pred CCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcC
Q 017240 262 GGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 311 (375)
Q Consensus 262 ~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~ 311 (375)
.. ....++|+++||++.. . .+..|+.+|..+|..|...+.+.
T Consensus 636 ~~--~t~~~~VyaiGD~~~~---~---~~~~A~~~g~~aa~~i~~~l~g~ 677 (690)
T 3k30_A 636 RD--AGEIASVRGIGDAWAP---G---TIAAAVWSGRRAAEEFDAVLPSN 677 (690)
T ss_dssp HH--HTSCSEEEECGGGTSC---B---CHHHHHHHHHHHHHHTTCCCCCT
T ss_pred hc--ccCCCCEEEEeCCCch---h---hHHHHHHHHHHHHHHHHhhccCC
Confidence 00 1224589999998853 1 23558999999998887766543
No 262
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.49 E-value=6.1e-07 Score=88.22 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHC--------CceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCC
Q 017240 192 LLHEELLRRCVES--------GVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (375)
Q Consensus 192 ~l~~~L~~~~~~~--------gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~ 246 (375)
.+.+.|.+.+.+. |++|+ ++.|++|..+++ .+.|++.+|+++.||.||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG-GVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS-CEEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCC-cEEEEECCCCEEEcCEEEEecCHH
Confidence 3445555544433 67899 999999998776 577999999889999999999864
No 263
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.44 E-value=1.4e-06 Score=85.48 Aligned_cols=188 Identities=16% Similarity=0.127 Sum_probs=104.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--------------------CC-cEEEECCCCCCCCCCcCcHHHHHhc-CCchhhhhh
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--------------------GL-NVGLIGPDLPFTNNYGVWEDEFRDL-GLEGCIEHV 165 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--------------------G~-~V~liE~~~~~~~~~g~~~~~l~~~-g~~~~~~~~ 165 (375)
-.|+|||+|..|+-+|..|++. |. +|+||++..+....+. ...+.++ .++.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~--~~elrel~~lp~----- 220 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFT--TLELRELADLDG----- 220 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCC--HHHHHHGGGCTT-----
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccC--hHHHHHhhcCCC-----
Confidence 5799999999999999999974 64 8999998765433321 1222221 1110
Q ss_pred cccceEEeCCCCCe-eecCCceeec--HHHHHHHHHHHHHH------CCceEE-EEEEEEEEEcCCceEEEEec------
Q 017240 166 WRDTVVYIDEDEPI-LIGRAYGRVS--RHLLHEELLRRCVE------SGVSYL-SSKVESITESTSGHRLVACE------ 229 (375)
Q Consensus 166 ~~~~~~~~~~~~~~-~~~~~~~~v~--~~~l~~~L~~~~~~------~gv~i~-~~~v~~i~~~~~~~~~V~~~------ 229 (375)
.....++.... .........+ ...+.+.|.+.+.+ .||+++ ++.++.+..++. ...|++.
T Consensus 221 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~-v~~v~~~~~~~~~ 296 (456)
T 1lqt_A 221 ---VDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRK-VERIVLGRNELVS 296 (456)
T ss_dssp ---EEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSS-CCEEEEEEEEEEE
T ss_pred ---ceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCc-EeEEEEEEEEecC
Confidence 00000000000 0000000001 12234556666655 689999 999999876532 2223332
Q ss_pred ----------CC--eEEecCEEEEccCCCCccccc--ccCceeeecCCCCC-ccCCCEEEEccCCCCCCCCChHHHHHHH
Q 017240 230 ----------HD--MIVPCRLATVASGAASGKLLE--YEEWSYIPVGGSLP-NTEQRNLAFGAAASMVHPATGYSVVRSL 294 (375)
Q Consensus 230 ----------~g--~~i~a~~vI~A~G~~s~~~~~--~~~~~~~p~~~~~~-~~~~~v~liGdaa~~~~p~~G~Gi~~al 294 (375)
+| +++.+|.||.|.|..+..+.. +.+...+....... ...++++++||.+...... +..++
T Consensus 297 ~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~----i~~a~ 372 (456)
T 1lqt_A 297 DGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV----IGTNK 372 (456)
T ss_dssp CSSSSEEEEEEEEEEEEECSEEEECSCEECCCCTTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC----TTHHH
T ss_pred CCcccccccCCCceEEEEcCEEEEccccccCCCCCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh----HHHHH
Confidence 34 469999999999976654311 12111111111111 2346899999987643322 23577
Q ss_pred hhHHHHHHHHHHHHhc
Q 017240 295 SEAPNYASAIAYILKH 310 (375)
Q Consensus 295 ~~a~~~a~~i~~~l~~ 310 (375)
.+|..+|..|...+..
T Consensus 373 ~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 373 KDAQDTVDTLIKNLGN 388 (456)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888888776654
No 264
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.39 E-value=1.2e-06 Score=90.17 Aligned_cols=162 Identities=13% Similarity=0.210 Sum_probs=91.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhh----------hhc--ccceEEeCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIE----------HVW--RDTVVYIDE 175 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~----------~~~--~~~~~~~~~ 175 (375)
-.|+|||||+.|+.+|..|++.|.+|+++- ......++.+..+. ... ......+..
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 562 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNI------------AGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQR 562 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCH------------HHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECS
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccch------------hhhhhhhcccccccccccccccccccCCCCcEEEEEEe
Confidence 579999999999999999999998766420 00000111000000 000 000011111
Q ss_pred CCCeeecCCceeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCccccc
Q 017240 176 DEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLLE 252 (375)
Q Consensus 176 ~~~~~~~~~~~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~~ 252 (375)
.. ..+... ++ ......+.+.+++.||+++ ++.|+.+.. + .+.++ .+| +++.+|.||+|+|..+..-.-
T Consensus 563 ~~-~~l~~~---l~-~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~-~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 563 KA-SKPGQG---LG-KTTGWIHRTTLLSRGVKMIPGVSYQKIDD--D-GLHVV-INGETQVLAVDNVVICAGQEPNRALA 633 (671)
T ss_dssp SC-SCTTTT---SC-TTTHHHHHHHHHHTTCEEECSCEEEEEET--T-EEEEE-ETTEEEEECCSEEEECCCEEECCTTH
T ss_pred cc-hhhccc---cc-cccHHHHHHHHHhcCCEEEeCcEEEEEeC--C-eEEEe-cCCeEEEEeCCEEEECCCccccHHHH
Confidence 00 000011 11 1233445666778999999 999998873 3 34444 566 579999999999965432110
Q ss_pred ccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHH
Q 017240 253 YEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAI 304 (375)
Q Consensus 253 ~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i 304 (375)
. .+...+.+++++||++..-.+. ...|+.+|..+|..|
T Consensus 634 -~---------~l~~~g~~v~aiGD~~~~~~~~----~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 634 -Q---------PLIDSGKTVHLIGGCDVAMELD----ARRAIAQGTRLALEI 671 (671)
T ss_dssp -H---------HHHTTTCCEEECGGGTCCSSCC----HHHHHHHHHHHHHHC
T ss_pred -H---------HHHhcCCCEEEECCcCccCchh----HHHHHHHHHHHHHhC
Confidence 0 0111245899999998765432 467888888877653
No 265
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.31 E-value=5.6e-06 Score=83.39 Aligned_cols=36 Identities=25% Similarity=0.412 Sum_probs=33.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLP 141 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~~ 141 (375)
.+||+||||||.||+++|..|++.| .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999998754
No 266
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.24 E-value=9.1e-07 Score=86.67 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHCCceEE-EEEEEEEEEc--CCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 192 LLHEELLRRCVESGVSYL-SSKVESITES--TSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~--~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
.+.+.|.+.+++.|++++ ++.|++|..+ +++.+.|.+ +|.++.||.||.|.|.++..+
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccchhh
Confidence 677788888888999999 9999999887 554456776 477899999999999887544
No 267
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.22 E-value=2.2e-06 Score=88.99 Aligned_cols=148 Identities=16% Similarity=0.073 Sum_probs=96.6
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCc
Q 017240 108 LDLVVIG--CGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (375)
Q Consensus 108 ~DVvIIG--gG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (375)
-.|+||| ||..|+.+|..|++.|.+|+|+++.. ..... .
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~-----~--------------------------------- 569 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM-----H--------------------------------- 569 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH-----H---------------------------------
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc-----c---------------------------------
Confidence 4799999 99999999999999999999999874 21100 0
Q ss_pred eeecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe--cCC-eE------------------EecCEEEEcc
Q 017240 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EHD-MI------------------VPCRLATVAS 243 (375)
Q Consensus 186 ~~v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~--~~g-~~------------------i~a~~vI~A~ 243 (375)
.+. ....+.+.+++.||+++ ++.|+++..+ .+.++. .++ ++ +.+|.||+|+
T Consensus 570 --~~~--~~~~~~~~l~~~GV~i~~~~~v~~i~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~ 642 (729)
T 1o94_A 570 --FTL--EYPNMMRRLHELHVEELGDHFCSRIEPG---RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVT 642 (729)
T ss_dssp --HTT--CHHHHHHHHHHTTCEEECSEEEEEEETT---EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEES
T ss_pred --ccc--cHHHHHHHHHhCCCEEEcCcEEEEEECC---eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECC
Confidence 000 02345566677899999 9999998743 334432 222 22 8999999999
Q ss_pred CCCCcccccccCceeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHh
Q 017240 244 GAASGKLLEYEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILK 309 (375)
Q Consensus 244 G~~s~~~~~~~~~~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~ 309 (375)
|..+..... ..... ..+..+....++|+++||++. |.. +..|+.+|..+|..|...+.
T Consensus 643 G~~p~~~l~-~~l~~-~vd~~~~t~~~~VyAiGD~~~---~~~---~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 643 GRHSECTLW-NELKA-RESEWAENDIKGIYLIGDAEA---PRL---IADATFTGHRVAREIEEANP 700 (729)
T ss_dssp CEEECCHHH-HHHHH-TGGGTGGGTCCEEEECGGGTS---CCC---HHHHHHHHHHHHHTTTSSCT
T ss_pred CCCCChHHH-HHHhh-hcccccccCCCCeEEEeCccc---hhh---HHHHHHHHHHHHHHhhhhcc
Confidence 965432210 00000 011112223468999999875 322 46789999999988865543
No 268
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.21 E-value=1.5e-06 Score=82.78 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=34.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCC-CCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD-LPFT 143 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~-~~~~ 143 (375)
..+||+|||||++||++|+.|++.|++|+|+|+. ...+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 4589999999999999999999999999999998 6554
No 269
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.19 E-value=9.5e-06 Score=79.65 Aligned_cols=130 Identities=9% Similarity=-0.004 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||+|.+|+-+|..|++.|.+|+|+++....... .
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~--------------------------------------~--- 236 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY--------------------------------------K--- 236 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC--------------------------------------C---
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC--------------------------------------C---
Confidence 57999999999999999999999999999876422100 0
Q ss_pred ecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-cccc------cCc-eee
Q 017240 188 VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLEY------EEW-SYI 259 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~~------~~~-~~~ 259 (375)
+ ..||+++ ..|+.+. ++ .|.+.+|.++.+|.||.|+|..... ++.. .+. .+.
T Consensus 237 ~--------------~~~V~~~-~~V~~i~--~~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v~ 296 (464)
T 2xve_A 237 W--------------PENWDER-PNLVRVD--TE---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWPL 296 (464)
T ss_dssp C--------------CTTEEEC-SCEEEEC--SS---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCCS
T ss_pred C--------------CCceEEc-CCeEEEe--CC---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcccc
Confidence 0 0256555 5566663 23 4777889889999999999976542 2221 111 111
Q ss_pred ecC-CCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHH
Q 017240 260 PVG-GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAI 304 (375)
Q Consensus 260 p~~-~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i 304 (375)
+.. ...+...++++++||.+.. ..+..+-.+|..++..+
T Consensus 297 ~~~~~~~~t~~p~i~aiGd~~~~------~~~~~a~~qa~~~a~~l 336 (464)
T 2xve_A 297 NLYKGVVWEDNPKFFYIGMQDQW------YSFNMFDAQAWYARDVI 336 (464)
T ss_dssp SEETTTEESSSTTEEECSCSCCS------SCHHHHHHHHHHHHHHH
T ss_pred cccceEecCCCCCEEEEeCcccc------cchHHHHHHHHHHHHHH
Confidence 111 1112335789999997642 12344555555554444
No 270
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.18 E-value=1.6e-06 Score=83.74 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~~~ 142 (375)
..+||+|||||++||++|+.|++.| ++|+|+|+....
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 3589999999999999999999999 899999987543
No 271
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.16 E-value=1.7e-06 Score=83.01 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
..+||+|||||++|+++|+.|++.|.+|+|||+....
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4689999999999999999999999999999987643
No 272
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.16 E-value=1.2e-06 Score=87.13 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLPFT 143 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~~~~ 143 (375)
.+||+|||||++||+||+.|++.| ++|+|+|+....+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 579999999999999999999999 9999999876443
No 273
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.15 E-value=1.4e-05 Score=80.07 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=60.9
Q ss_pred HCCceEE---EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc--ccc--ccC---------ceeee--cCCC
Q 017240 203 ESGVSYL---SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK--LLE--YEE---------WSYIP--VGGS 264 (375)
Q Consensus 203 ~~gv~i~---~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~--~~~--~~~---------~~~~p--~~~~ 264 (375)
+.+|++. .+.|+.+..+ +|.+.||+++.+|.||.|||..... +.. ..+ |.--| ..+.
T Consensus 342 ~~nV~lv~~~~~~I~~it~~-----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~ 416 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTAK-----GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGV 416 (540)
T ss_dssp STTEEEEETTTSCEEEECSS-----EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTT
T ss_pred CCCEEEEeCCCCCccEEecC-----eEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhcccc
Confidence 4578887 6778777643 5788999889999999999976653 211 110 10001 0011
Q ss_pred CCccCCCEEEE-ccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 265 LPNTEQRNLAF-GAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 265 ~~~~~~~v~li-Gdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
....-+|++++ |.... .+..+..+-..+..++++|....+.+.
T Consensus 417 ~v~gfPN~f~~~Gp~~~-----~~s~~~~~e~q~~~i~~~i~~~~~~~~ 460 (540)
T 3gwf_A 417 STANFPNWFMVLGPNGP-----FTNLPPSIETQVEWISDTIGYAERNGV 460 (540)
T ss_dssp BCTTCTTEEESSCSSCB-----CSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCceEEEecCCCC-----CccHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 11224577777 54433 334455566777788888888776653
No 274
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.15 E-value=2.2e-05 Score=76.55 Aligned_cols=129 Identities=12% Similarity=0.038 Sum_probs=82.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCc-EEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~-V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
-+|+|||+|.+|+-+|..|++.|.+ |+|+++....
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------------------------------------------- 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------------------------------------------- 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------------------------
Confidence 5799999999999999999999999 9999986421
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeE-EecCEEEEccCCCCcc-c-----ccccCceee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMI-VPCRLATVASGAASGK-L-----LEYEEWSYI 259 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~-i~a~~vI~A~G~~s~~-~-----~~~~~~~~~ 259 (375)
+.+.||.+ ...|+.+..+++ .|++.||.+ +.+|.||.|+|..... + +......+.
T Consensus 249 --------------l~~~~i~~-~~~v~~~~~~~~---~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~ 310 (447)
T 2gv8_A 249 --------------IQNESLQQ-VPEITKFDPTTR---EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLI 310 (447)
T ss_dssp --------------CBCSSEEE-ECCEEEEETTTT---EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCC
T ss_pred --------------CCCCCeEE-ecCeEEEecCCC---EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCcee
Confidence 11234442 456666653333 577788865 6899999999976542 2 211000111
Q ss_pred ecCCCC---------CccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHH
Q 017240 260 PVGGSL---------PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIA 305 (375)
Q Consensus 260 p~~~~~---------~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~ 305 (375)
. .... .....+++++||..... .+..+..+|..+|..+.
T Consensus 311 ~-~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~------~~~~a~~qa~~~a~~~~ 358 (447)
T 2gv8_A 311 D-DGSHVHNVYQHIFYIPDPTLAFVGLALHVV------PFPTSQAQAAFLARVWS 358 (447)
T ss_dssp S-SSSSCCSEETTTEETTCTTEEESSCCBSSC------HHHHHHHHHHHHHHHHT
T ss_pred c-CCCcccccccccccCCCCcEEEEecccccc------CchHHHHHHHHHHHHHc
Confidence 1 1111 12345788888876431 34566666766666553
No 275
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.15 E-value=2.1e-06 Score=84.69 Aligned_cols=37 Identities=38% Similarity=0.504 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
..+||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 3579999999999999999999999999999987543
No 276
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.11 E-value=2.2e-06 Score=82.48 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLP 141 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~~ 141 (375)
.+||+|||||++|+++|+.|++. |++|+|+|++..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPH 42 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 58999999999999999999999 999999998754
No 277
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.04 E-value=3e-06 Score=80.61 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
+||+|||||++|+++|+.|++.|++|+|+|+....
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 79999999999999999999999999999987543
No 278
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.00 E-value=4.2e-06 Score=82.79 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
.+||+|||||++||++|+.|++.|++|+|+|+....+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4799999999999999999999999999999986543
No 279
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.98 E-value=5.6e-06 Score=81.79 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
.+||+|||||++|+++|+.|++.|++|+|+|+....
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 479999999999999999999999999999987543
No 280
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.93 E-value=2.5e-05 Score=77.24 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=73.2
Q ss_pred HHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCcc-cccc-------cCceeee-cCCCCCccC
Q 017240 200 RCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLEY-------EEWSYIP-VGGSLPNTE 269 (375)
Q Consensus 200 ~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~-~~~~-------~~~~~~p-~~~~~~~~~ 269 (375)
.+++.||+++ ++.|+++..+++ ...|.+.+|.++.+|.||+|+|..+.. +... .+..+++ ++..+. ..
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~~~-v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~ 343 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGNEK-VERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IK 343 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECSSS-CCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EE
T ss_pred HHHhCCcEEEeCCeeEEEecCCc-eEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cC
Confidence 3456799999 999999986543 556778888899999999999977654 2111 1244455 444444 55
Q ss_pred CCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHH
Q 017240 270 QRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 308 (375)
Q Consensus 270 ~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l 308 (375)
++|+++||.+... ....|+.++..+|..+...+
T Consensus 344 ~~vya~GD~~~~~------~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 344 DGIYVAGSAVSIK------PHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TTEEECSTTTCCC------CHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeccCCcc------CHHHHHHHHHHHHHHHHHHc
Confidence 7899999998641 24678999999999988766
No 281
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.93 E-value=7e-06 Score=81.06 Aligned_cols=37 Identities=32% Similarity=0.389 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~~~ 142 (375)
..+||+|||||++||++|+.|++.| .+|+|+|+....
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3589999999999999999999999 799999987644
No 282
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.93 E-value=1e-05 Score=78.70 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~ 250 (375)
..+.+.|.+.+++.|++++ ++.|++|..++++...|.+ +|+++.||.||.|+|.++...
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCcccc
Confidence 3677788888888899999 9999999887664444554 677899999999999886543
No 283
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.92 E-value=7.4e-06 Score=83.36 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=34.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
.+||+|||||++|+++|+.|++.|++|+|||+....+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 5899999999999999999999999999999976544
No 284
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.92 E-value=6.8e-06 Score=78.68 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
.+||+|||||++|+++|+.|++.|++|+|||++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 379999999999999999999999999999987543
No 285
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.85 E-value=1.1e-05 Score=80.85 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..||+||||+|++|+++|..|++.|++|+|||+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45999999999999999999999999999999875
No 286
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.83 E-value=5.2e-05 Score=75.90 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..+|+|||+|++|+.+|..|++.+.+|+||++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35799999999999999999999999999998865
No 287
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.81 E-value=0.00016 Score=66.41 Aligned_cols=150 Identities=17% Similarity=0.107 Sum_probs=98.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
..|+|||||..|+.+|..|++.|.+|+|+++......
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~------------------------------------------- 189 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA------------------------------------------- 189 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc-------------------------------------------
Confidence 4799999999999999999999999999997642210
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEe-----cCCeEEecCEEEEccCCCCccc-cc----ccCc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-----EHDMIVPCRLATVASGAASGKL-LE----YEEW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~-----~~g~~i~a~~vI~A~G~~s~~~-~~----~~~~ 256 (375)
.. . ...+.....++..+ ...+..+...++....+.. .+++++.+|.|++|.|..+..- .. ..+.
T Consensus 190 -~~-~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~ 264 (314)
T 4a5l_A 190 -SK-T---MQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADD 264 (314)
T ss_dssp -CH-H---HHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTT
T ss_pred -cc-h---hhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCC
Confidence 00 1 11222334567777 7777777665443222322 2356899999999999654321 11 1223
Q ss_pred eeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 257 SYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 257 ~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
.++ +.......-++|+++||.++..... +..|+.+|..+|..+.++|+.
T Consensus 265 G~i-v~~~~~Ts~pgIyA~GDv~~~~~~~----~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 265 GYI-LTEGPKTSVDGVFACGDVCDRVYRQ----AIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp SCB-CCBTTBCSSTTEEECSTTTCSSCCC----HHHHHHHHHHHHHHHHHHHHT
T ss_pred eeE-eCCCCccCCCCEEEEEeccCCcchH----HHHHHHHHHHHHHHHHHHHhc
Confidence 333 2333445567899999987643211 356888899999999888853
No 288
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.78 E-value=1.3e-05 Score=79.82 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=31.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-CCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE~~~ 140 (375)
.+||+||||||++|+.+|..|++ .|++|+|||+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 36999999999999999999998 679999999874
No 289
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.69 E-value=3.3e-05 Score=79.20 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=33.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
..+||+|||||++|+++|+.|++.|++|+|+|+....
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4589999999999999999999999999999987543
No 290
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.64 E-value=2.1e-05 Score=78.63 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
.+||+||||||++|+.+|..|++ |.+|+|||+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35999999999999999999999 999999998753
No 291
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.62 E-value=4.8e-05 Score=79.81 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=33.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
..+||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 4579999999999999999999999999999987543
No 292
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.60 E-value=3.9e-05 Score=77.25 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=32.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~ 140 (375)
..||+||||||.||+++|..|++. +.+|+|||+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 89999999876
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.56 E-value=0.00015 Score=72.60 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
...|+|||+|.+|+.+|..|++.|.+|++|++.+.+
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 358999999999999999999999999999988653
No 294
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.50 E-value=7.1e-05 Score=74.19 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..+|++|||+|++|+++|..|++.|.+|+|||+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35999999999999999999999999999999875
No 295
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.50 E-value=0.00041 Score=63.79 Aligned_cols=151 Identities=15% Similarity=0.148 Sum_probs=97.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCcee
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
-.|+|||||+.|+.+|..|++.|.+|+|||+.+.....
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 183 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ------------------------------------------ 183 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc------------------------------------------
Confidence 37999999999999999999999999999987432110
Q ss_pred ecHHHHHHHHHHHHHHCCceEE-EEEEEEEEEcCCc--eEEEE-ec--CCeEEecCEEEEccCCCCccccc-----ccCc
Q 017240 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG--HRLVA-CE--HDMIVPCRLATVASGAASGKLLE-----YEEW 256 (375)
Q Consensus 188 v~~~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~--~~~V~-~~--~g~~i~a~~vI~A~G~~s~~~~~-----~~~~ 256 (375)
. .. ....+++.++... ...+..+...+.. ...+. .. ++..+.+|.|+.+.|..+..... ..+.
T Consensus 184 --~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~ 257 (312)
T 4gcm_A 184 --R-IL---QDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDV 257 (312)
T ss_dssp --H-HH---HHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTT
T ss_pred --h-hH---HHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCC
Confidence 0 00 1122334566666 5555555444331 11111 12 23579999999999965533211 1233
Q ss_pred eeeecCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 257 SYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 257 ~~~p~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
..+.++..+...-++|+++||.+..-.. -+..|+.+|..+|..|.++|+.
T Consensus 258 G~I~vd~~~~Ts~pgIyA~GDv~~~~~~----~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 258 GYIVTKDDMTTSVPGIFAAGDVRDKGLR----QIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp SCBCCCTTSBCSSTTEEECSTTBSCSCC----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEeeCCCCccCCCCEEEEeecCCCcch----HHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555555566789999998752211 2477899999999999998864
No 296
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.46 E-value=0.0001 Score=73.05 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..+|++|||+|++|+.+|..|++.|.+|+|||+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46999999999999999999999999999999864
No 297
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.44 E-value=7.7e-05 Score=75.35 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHH-CCCcEEEECCCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE~~~ 140 (375)
...||++|||+|++|+++|..|++ .|.+|+|||+..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 346999999999999999999999 899999999764
No 298
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.41 E-value=5.2e-05 Score=76.13 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHH-CCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~-~G~~V~liE~~~ 140 (375)
+||+||||||+||+.+|..|++ .|.+|+|||+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 4899999999999999999998 799999999864
No 299
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.39 E-value=0.00011 Score=73.56 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=32.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~ 140 (375)
..||++|||+|++|+++|..|++. |.+|+|||+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 359999999999999999999998 89999999874
No 300
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.30 E-value=0.00012 Score=75.09 Aligned_cols=36 Identities=25% Similarity=0.493 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCC--------CcEEEECCCC-CC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLG--------LNVGLIGPDL-PF 142 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G--------~~V~liE~~~-~~ 142 (375)
..+|+|||||++||++|+.|++.| ++|+|+|+.. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999999 9999999886 44
No 301
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.28 E-value=0.00024 Score=65.24 Aligned_cols=148 Identities=9% Similarity=0.073 Sum_probs=103.2
Q ss_pred ccEEEECCCH-HHHHHHHHHHHCCCcEEEECCCCCCCCCCcCcHHHHHhcCCchhhhhhcccceEEeCCCCCeeecCCce
Q 017240 108 LDLVVIGCGP-AGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (375)
Q Consensus 108 ~DVvIIGgG~-aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (375)
.+++|||||. +++.+|..+.+.|.+|+|+++....
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~-------------------------------------------- 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL-------------------------------------------- 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC--------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccc--------------------------------------------
Confidence 4678888775 5678888888899999999865321
Q ss_pred eecHHHHHHHHHHHHHHCCceEEEEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccc------ccccCceeee
Q 017240 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL------LEYEEWSYIP 260 (375)
Q Consensus 187 ~v~~~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~------~~~~~~~~~p 260 (375)
...+.+.+.+.|+.++...++.+..+++....|++.+|+++.++.+|++.|...+.. .+..+...+.
T Consensus 183 -------~~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~ 255 (304)
T 4fk1_A 183 -------SQTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFV 255 (304)
T ss_dssp -------CHHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSC
T ss_pred -------hhhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEE
Confidence 112344556789999844577776555435578899999999999988888665432 1223445556
Q ss_pred cCCCCCccCCCEEEEccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhc
Q 017240 261 VGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 310 (375)
Q Consensus 261 ~~~~~~~~~~~v~liGdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~ 310 (375)
++..+...-++|+++||.+... |. -+..|+.++..+|..|.++|..
T Consensus 256 vd~~~~Ts~p~IyA~GDv~~~~-~~---~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 256 IDDFGRTSEKNIYLAGETTTQG-PS---SLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp SSTTCBCSSTTEEECSHHHHTS-CC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcCCccCCCCEEEEeccCCCc-ch---HHHHHHHHHHHHHHHHHHHHhh
Confidence 6655555677899999976421 11 1467888999999999888853
No 302
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.08 E-value=0.00061 Score=69.00 Aligned_cols=40 Identities=25% Similarity=0.371 Sum_probs=36.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY 146 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~ 146 (375)
.|||+|||+|..|..+|..|++.|.+|++||++...+.++
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 5999999999999999999999999999999998776543
No 303
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.08 E-value=0.003 Score=63.00 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=62.1
Q ss_pred HHHHHHCCceEE---EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCc-cc-ccc--c---C------ceeee-
Q 017240 198 LRRCVESGVSYL---SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG-KL-LEY--E---E------WSYIP- 260 (375)
Q Consensus 198 ~~~~~~~gv~i~---~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~-~~-~~~--~---~------~~~~p- 260 (375)
.+.+.+.+|++. ++.|+++.. + .|.+.| +++.+|.||.|||.... .. .+. . + |.--|
T Consensus 345 ~~~~~~~~v~lv~~~~~~i~~i~~--~---gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~ 418 (542)
T 1w4x_A 345 YEMFNRDNVHLVDTLSAPIETITP--R---GVRTSE-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPR 418 (542)
T ss_dssp HHHTTSTTEEEEETTTSCEEEECS--S---EEEESS-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCC
T ss_pred HHHhCCCCEEEEecCCCCceEEcC--C---eEEeCC-eEEecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchh
Confidence 344445678876 567877753 2 577778 78999999999997753 21 111 0 0 00000
Q ss_pred --cCCCCCccCCCEEEE-ccCCCCCCCCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 261 --VGGSLPNTEQRNLAF-GAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 261 --~~~~~~~~~~~v~li-Gdaa~~~~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
.+.. ....++++++ |+.+..-+ +.-+..+...+..+++.|....+++.
T Consensus 419 ~y~~~~-v~~~Pn~f~~~G~~~~~~~---~~~~~~~e~q~~~ia~~i~~~~~~~~ 469 (542)
T 1w4x_A 419 TYLGLS-TAGFPNLFFIAGPGSPSAL---SNMLVSIEQHVEWVTDHIAYMFKNGL 469 (542)
T ss_dssp CBTTTB-CTTSTTEEESSCTTSSGGG---SCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecccc-cCCCCceEEEcCCCCCccc---ccHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 0111 1223467776 77652111 22346677889999999998887653
No 304
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.62 E-value=0.049 Score=53.58 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~~ 141 (375)
..|+|||+|-+|.-++..|++. +.+|+++-+...
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4799999999999999999875 679999987653
No 305
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.30 E-value=0.0037 Score=51.24 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|+|||+|..|..+|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999998764
No 306
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.25 E-value=0.0063 Score=48.96 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
-.|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999874
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.24 E-value=0.0041 Score=49.47 Aligned_cols=32 Identities=28% Similarity=0.500 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.+|+|||+|..|..+|..|.+.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999999999999999999999999876
No 308
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.89 E-value=0.0079 Score=48.23 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999863
No 309
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.76 E-value=0.038 Score=53.17 Aligned_cols=114 Identities=12% Similarity=0.146 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCC--eEEecCEEEEccCCCCcccccc-------cCceeeecC
Q 017240 193 LHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLLEY-------EEWSYIPVG 262 (375)
Q Consensus 193 l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g--~~i~a~~vI~A~G~~s~~~~~~-------~~~~~~p~~ 262 (375)
..+.+.+.+++.||+++ ++.|++++.+ .+.++..+| +++.+|.+|.|.|...+..... ...+.+.++
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~~---~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd 278 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD---KVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVN 278 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS---EEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeCC---ceEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEec
Confidence 45566777788999999 9999988543 445555444 5899999999999765433211 122334445
Q ss_pred CCCC-ccCCCEEEEccCCCCCC----------CCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 263 GSLP-NTEQRNLAFGAAASMVH----------PATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 263 ~~~~-~~~~~v~liGdaa~~~~----------p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
..+. ...++|+++||.+..-+ |-+| ..|.++|+.+|+.|...+++..
T Consensus 279 ~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a---~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 279 RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTG---MMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp TTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCH---HHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCCCEEEeccEEecCCcccCcCcCccchHH---HHHHHHHHHHHHHHHHHhcCCC
Confidence 5554 34579999999987543 4445 5788999999999999988654
No 310
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.68 E-value=0.01 Score=45.59 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~ 140 (375)
..|+|+|+|..|..++..|.+.| ++|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 57999999999999999999999 8999998763
No 311
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.67 E-value=0.013 Score=47.79 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|..|..+|..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999999999999986
No 312
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.56 E-value=0.014 Score=53.41 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 313
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.24 E-value=0.01 Score=56.46 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHCCceEE-EEEEEEEEEcCCceEEEEecCCeEEecCEEEEccCCCCccccc----ccCceeeecCCC-CC
Q 017240 193 LHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE----YEEWSYIPVGGS-LP 266 (375)
Q Consensus 193 l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~V~~~~g~~i~a~~vI~A~G~~s~~~~~----~~~~~~~p~~~~-~~ 266 (375)
+.+.+.+.+++.|++++ ++.+..++.+.+ ...|++.+|+++.+|.|++|.|.....+.. ..+...++++.. +.
T Consensus 204 ~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~-~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~ 282 (401)
T 3vrd_B 204 WERLYGFGTENALIEWHPGPDAAVVKTDTE-AMTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFE 282 (401)
T ss_dssp HHHHSCTTSTTCSEEEECTTTTCEEEEETT-TTEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCB
T ss_pred HHHHHHHHHHhcCcEEEeCceEEEEEeccc-ceEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcce
Confidence 33344444566899999 888888877655 457889999999999999999965443321 134455666544 33
Q ss_pred -ccCCCEEEEccCCCCC-CCCChHHHHHHHhhHHHHHHHHHHHHhcCC
Q 017240 267 -NTEQRNLAFGAAASMV-HPATGYSVVRSLSEAPNYASAIAYILKHDH 312 (375)
Q Consensus 267 -~~~~~v~liGdaa~~~-~p~~G~Gi~~al~~a~~~a~~i~~~l~~~~ 312 (375)
...++|+++||.+... .|.++ ..|..+|+.+|+.|...+++..
T Consensus 283 ~t~~p~VfAiGDva~~~~~pk~a---~~A~~qa~v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMPKSA---YSANSQAKVAAAAVVALLKGEE 327 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSCBSH---HHHHHHHHHHHHHHHHHHHTCC
T ss_pred ecCCCCEEEecccccCCCCCchH---HHHHHHHHHHHHHHHHHhcCCC
Confidence 3357999999987654 35555 6788999999999999998754
No 314
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.20 E-value=0.016 Score=46.16 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.|+|+|+|..|..+|..|.+.|++|++++++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999999999876
No 315
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.13 E-value=0.017 Score=48.58 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHC-CCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~-G~~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999863
No 316
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.96 E-value=0.019 Score=49.69 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999764
No 317
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.88 E-value=0.026 Score=52.10 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
-.|+|||+|..|...|..++..|++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999764
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.65 E-value=0.033 Score=48.66 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
...|+|||||..|...|..|.+.|.+|+||++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999875
No 319
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.32 E-value=0.044 Score=50.91 Aligned_cols=34 Identities=24% Similarity=0.149 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
...|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999999998 999999874
No 320
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.29 E-value=0.041 Score=49.77 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 469999999999999999999999999999864
No 321
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.27 E-value=0.044 Score=50.50 Aligned_cols=33 Identities=33% Similarity=0.430 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|..|.+.|..|++.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999863
No 322
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.15 E-value=0.052 Score=50.96 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|.|||+|..|.++|..|++.|++|++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999863
No 323
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.14 E-value=0.051 Score=51.71 Aligned_cols=34 Identities=29% Similarity=0.397 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|+|||+|++|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3589999999999999999999999999999874
No 324
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.11 E-value=0.044 Score=48.73 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999875
No 325
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=94.07 E-value=0.061 Score=52.12 Aligned_cols=38 Identities=21% Similarity=0.180 Sum_probs=34.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
..+||||||||++||++|+.|++.|++|+|+|++...+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999986544
No 326
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.04 E-value=0.054 Score=48.76 Aligned_cols=33 Identities=24% Similarity=0.273 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
.|.|||+|..|...|..|++.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999988753
No 327
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.02 E-value=0.052 Score=49.86 Aligned_cols=32 Identities=34% Similarity=0.474 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
..|+|||+|..|..+|..|++.|+ +|++++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999999999 99999976
No 328
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.91 E-value=0.058 Score=49.80 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 329
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.90 E-value=0.07 Score=45.94 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|.|||+|..|.+.|..|++.|++|+++++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999987653
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.87 E-value=0.055 Score=52.94 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+.|.|||+|..|+.+|..|++.|++|++++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999763
No 331
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.81 E-value=0.06 Score=49.03 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999876
No 332
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.80 E-value=0.066 Score=49.66 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999874
No 333
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.79 E-value=0.053 Score=49.81 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|+|||+|..|.+.|..|++.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999863
No 334
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.78 E-value=0.024 Score=55.18 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+.|+|+|+|-.|..+|..|...|++|+|||++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999874
No 335
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.76 E-value=0.03 Score=50.50 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||||..|+..|..|.+.|.+|+||++.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 57999999999999999999999999999865
No 336
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.71 E-value=0.066 Score=48.87 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999998764
No 337
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.70 E-value=0.072 Score=51.38 Aligned_cols=36 Identities=28% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 105 ~~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
+....+.|||.|..||.+|..|++.|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 345689999999999999999999999999998763
No 338
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.53 E-value=0.061 Score=50.76 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999874
No 339
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.49 E-value=0.058 Score=52.32 Aligned_cols=33 Identities=30% Similarity=0.265 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||.|.+|+++|..|.++|++|++.|...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 579999999999999999999999999999764
No 340
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.49 E-value=0.045 Score=52.92 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||.|++|+++|..|+++|++|+++|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 469999999999999999999999999998654
No 341
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.40 E-value=0.07 Score=51.32 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=30.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
....|.|||+|..|+.+|..|++ |++|+++|++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999764
No 342
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.30 E-value=0.095 Score=48.27 Aligned_cols=33 Identities=30% Similarity=0.262 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...|+|||+|..|.++|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3579999999999999999999999 99999976
No 343
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.29 E-value=0.077 Score=51.44 Aligned_cols=33 Identities=45% Similarity=0.580 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|+.+|..|++.|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 344
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.26 E-value=0.059 Score=49.21 Aligned_cols=31 Identities=32% Similarity=0.387 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHC-----C-CcEEEECC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL-----G-LNVGLIGP 138 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~-----G-~~V~liE~ 138 (375)
.+|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 345
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.13 E-value=0.082 Score=50.65 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||.|..|..+|..|.+.|++|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999874
No 346
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.12 E-value=0.091 Score=48.12 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
.|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999999 999999763
No 347
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.10 E-value=0.14 Score=46.76 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998864
No 348
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.05 E-value=0.1 Score=47.78 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|.|||.|..|...|..|++.|++|+++++...
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 349
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.04 E-value=0.1 Score=48.05 Aligned_cols=34 Identities=24% Similarity=0.137 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
..+|+|||+|..|.++|+.|+..|. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 899999764
No 350
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.02 E-value=0.11 Score=50.29 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|.|||+|..|...|..|++.|++|+++|.+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998753
No 351
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.94 E-value=0.094 Score=50.04 Aligned_cols=33 Identities=33% Similarity=0.437 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999764
No 352
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=92.92 E-value=0.074 Score=51.18 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
.+||+|||+|++|+++|..|++.|++|+|+|++..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 40 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPY 40 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 58999999999999999999999999999998754
No 353
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.91 E-value=0.098 Score=49.56 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|.+|+.+|..+...|.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999764
No 354
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.91 E-value=0.1 Score=48.55 Aligned_cols=32 Identities=34% Similarity=0.282 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|..|...|..|++.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999876
No 355
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.91 E-value=0.065 Score=48.73 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|+|||+|..|.+.|..|++.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999998763
No 356
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.85 E-value=0.1 Score=47.99 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|++.|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 579999999999999999999998 999999864
No 357
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.84 E-value=0.12 Score=47.86 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999864
No 358
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.84 E-value=0.1 Score=50.92 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHC-CC-cEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL-GL-NVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~-G~-~V~liE~~~~ 141 (375)
..|.|||+|..|+.+|..|++. |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999998765
No 359
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.76 E-value=0.11 Score=47.98 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
...|+|||+|..|.++|..|+..|+ +++++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3589999999999999999999997 89999975
No 360
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.76 E-value=0.12 Score=50.62 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 361
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.71 E-value=0.035 Score=44.59 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|..|..+|..|.+.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 47999999999999999999999999999876
No 362
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.70 E-value=0.11 Score=47.80 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|..|.+.|..|++.|++|+++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 57999999999999999999999999999 55
No 363
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.66 E-value=0.12 Score=50.25 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999764
No 364
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.64 E-value=0.12 Score=49.94 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
...+.|||.|..|+.+|..|++.|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 365
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.61 E-value=0.12 Score=47.11 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
+..|.|||+|..|...|..|+ .|++|+++|+..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 468999999999999999999 999999999874
No 366
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.57 E-value=0.12 Score=47.84 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 68999999999999999999999999999876
No 367
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.57 E-value=0.096 Score=49.18 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|.+|..++..|...|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999876
No 368
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.52 E-value=0.094 Score=50.59 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|.|||+|..|+.+|..|++.|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998763
No 369
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.51 E-value=0.098 Score=48.36 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHH-HHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLA-LAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~-aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||.|.+|++ +|..|.++|++|.+.|...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999996 8899999999999999764
No 370
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.49 E-value=0.12 Score=46.64 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998753
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.43 E-value=0.12 Score=47.03 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 689999999999999999999997 799999774
No 372
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.33 E-value=0.13 Score=47.04 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|+|||+|..|.+.|..|+ .|.+|+++.+..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999998763
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.31 E-value=0.19 Score=45.98 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998764
No 374
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.28 E-value=0.11 Score=47.72 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~ 138 (375)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 375
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.20 E-value=0.13 Score=45.35 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|.|||+|..|.++|..|++.|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3679999999999999999999999999998764
No 376
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.20 E-value=0.15 Score=46.86 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHC--CCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~ 140 (375)
.|+|||+|..|..+|..|++. |.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 599999999999999999985 78999999874
No 377
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.17 E-value=0.17 Score=46.77 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999764
No 378
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.14 E-value=0.19 Score=46.22 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
..|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999874
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.13 E-value=0.13 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|.|||.|..|...|..|++.|++|+++++..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999864
No 380
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.07 E-value=0.15 Score=44.04 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999876
No 381
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.06 E-value=0.051 Score=47.69 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
...|.|||.|..|.++|..|++.|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 357999999999999999999999999999863
No 382
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.03 E-value=0.12 Score=48.78 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
+..|||+|||.+|..+|..|...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4689999999999999999999999 89999986
No 383
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.03 E-value=0.16 Score=47.04 Aligned_cols=33 Identities=12% Similarity=0.360 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 679999999999999999999997 688998764
No 384
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.96 E-value=0.16 Score=45.56 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|.+|.++|..|++.|.+|+|+.+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999876
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.87 E-value=0.13 Score=48.34 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|..|..+|..|+..|.+|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 57999999999999999999999999999876
No 386
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.74 E-value=0.15 Score=45.19 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 579999999999999999999998 789998764
No 387
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.71 E-value=0.13 Score=46.69 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|.|||.|..|...|..|++.|++|++++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 388
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.68 E-value=0.15 Score=47.63 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
.|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 599999999999999999999999999987643
No 389
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.65 E-value=0.15 Score=46.93 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
.|+|||+|..|.++|..|++.|+ +|+++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 58999999999999999999999 99999976
No 390
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.64 E-value=0.19 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998763
No 391
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.56 E-value=0.2 Score=46.20 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
.+|+|||+|..|.++|..|+..|+ +|+++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 579999999999999999999999 999999764
No 392
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.56 E-value=0.23 Score=46.27 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||.|..|.+.|..|.+.|++|++++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 393
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.56 E-value=0.14 Score=44.44 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEE-ECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGL-IGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~l-iE~~~ 140 (375)
..|.|||+|-.|.++|..|++.|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 78764
No 394
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.53 E-value=0.21 Score=44.80 Aligned_cols=33 Identities=30% Similarity=0.489 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..++|||+|.+|.++|..|++.|.+|+|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998774
No 395
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.53 E-value=0.16 Score=46.60 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3579999999999999999999999 99999985
No 396
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.44 E-value=0.16 Score=48.02 Aligned_cols=32 Identities=34% Similarity=0.537 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|..|..+|..+...|.+|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999876
No 397
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.42 E-value=0.14 Score=46.26 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
.|.|||.|..|...|..|++.|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 398
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.34 E-value=0.25 Score=44.48 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=30.2
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|.|||+ |-.|...|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999 999999999999999999999876
No 399
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.27 E-value=0.17 Score=45.95 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999998764
No 400
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.27 E-value=0.15 Score=48.64 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|.|||+|..|+.+|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999763
No 401
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.18 E-value=0.18 Score=45.83 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
+|+|||+|..|.++|..|+..|+ +|+++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999764
No 402
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.10 E-value=0.18 Score=43.00 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=29.1
Q ss_pred cEEEEC-CCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 109 DLVVIG-CGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 109 DVvIIG-gG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.|+||| +|..|...|..|++.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999 9999999999999999999999876
No 403
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.10 E-value=0.17 Score=47.62 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4689999999999999999999998 79999987
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.09 E-value=0.23 Score=45.13 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=30.5
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIG-CGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIG-gG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3699999 99999999999999999999998764
No 405
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.07 E-value=0.23 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 406
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.06 E-value=0.21 Score=48.55 Aligned_cols=32 Identities=31% Similarity=0.263 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|..|..+|..|+..|.+|+++|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 56999999999999999999999999999876
No 407
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.05 E-value=0.23 Score=45.49 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999764
No 408
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.93 E-value=0.26 Score=48.11 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999875
No 409
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.91 E-value=0.21 Score=44.25 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCC-CcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~ 140 (375)
.|.|||+|..|...|..|++.| ++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999998763
No 410
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.89 E-value=0.18 Score=49.01 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||||..|...|..|.+.|.+|+|++++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 57999999999999999999999999999875
No 411
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.88 E-value=0.28 Score=45.26 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 579999999999999999999988 999999764
No 412
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.84 E-value=0.27 Score=43.44 Aligned_cols=34 Identities=32% Similarity=0.380 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC----CcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG----LNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G----~~V~liE~~~~ 141 (375)
..|.|||+|..|.+.|..|++.| ++|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 69999987754
No 413
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.82 E-value=0.13 Score=48.21 Aligned_cols=31 Identities=32% Similarity=0.287 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999876
No 414
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.80 E-value=0.22 Score=45.33 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..|+|||+|.+|.++|..|++.|. +|+|+.+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 479999999999999999999998 89999876
No 415
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.75 E-value=0.34 Score=44.74 Aligned_cols=33 Identities=27% Similarity=0.404 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
...|+|||+|..|.++|+.|+..|+ +|+++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3589999999999999999999998 89999975
No 416
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.72 E-value=0.095 Score=45.73 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 479999999999999999999999 99999874
No 417
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.67 E-value=0.23 Score=44.80 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999998864
No 418
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.61 E-value=0.22 Score=45.57 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCC--CcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G--~~V~liE~~~ 140 (375)
.|+|||+|..|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999763
No 419
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.51 E-value=0.22 Score=45.03 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|.++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999998763
No 420
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.50 E-value=0.27 Score=44.02 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
.|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998763
No 421
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.45 E-value=0.23 Score=45.64 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC-CcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G-~~V~liE~~~ 140 (375)
..|.|||.|..|..+|..|++.| ++|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999874
No 422
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.42 E-value=0.26 Score=43.76 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCc-EEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~-V~liE~~~ 140 (375)
..|.|||+|-.|...|..|++.|++ |.++++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89998763
No 423
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.29 E-value=0.22 Score=46.64 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 579999999999999999999998 799998764
No 424
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.22 E-value=0.26 Score=45.22 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
.|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 59999999999999999999987 899999764
No 425
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.18 E-value=0.28 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3589999999999999999999999999998763
No 426
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.10 E-value=0.28 Score=44.81 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
..|+|||+|..|...|+.|+..|+ +|+|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 999999765
No 427
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.10 E-value=0.29 Score=44.95 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
.+|+|||+|..|.++|..|+..|. ++.++|.+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 689999999999999999999885 79999865
No 428
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.04 E-value=0.34 Score=45.14 Aligned_cols=33 Identities=12% Similarity=0.278 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 589999999999999999999998 799998764
No 429
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.02 E-value=0.26 Score=50.69 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 430
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.01 E-value=0.31 Score=48.70 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
...|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 3679999999999999999999998 799998765
No 431
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.00 E-value=0.31 Score=45.01 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
..|+|||+|..|.++|+.|+..|+ +++|+|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 589999999999999999999988 89999975
No 432
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.99 E-value=0.32 Score=47.47 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|.|||+|..|..+|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998764
No 433
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.95 E-value=0.31 Score=47.50 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
++|.|||+|..|..+|..|++.|++|+++++..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998763
No 434
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.90 E-value=0.34 Score=47.55 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||.|..|..+|..|++.|++|+++++..
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999998864
No 435
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.89 E-value=0.25 Score=46.42 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC-------CcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG-------LNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G-------~~V~liE~~~~ 141 (375)
..|.|||+|..|.+.|..|++.| ++|+++++...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 46999999999999999999999 99999988653
No 436
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.88 E-value=0.26 Score=44.19 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|.|||+|..|...|..|++ |++|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999998764
No 437
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.85 E-value=0.29 Score=48.74 Aligned_cols=33 Identities=12% Similarity=0.360 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 689999999999999999999998 799998764
No 438
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.78 E-value=0.29 Score=43.99 Aligned_cols=32 Identities=28% Similarity=0.289 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||+|.+|.++|..|.+.|.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999876
No 439
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.76 E-value=0.28 Score=44.40 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998763
No 440
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.76 E-value=0.33 Score=44.55 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~~ 140 (375)
..|+|||+|..|.++|+.|+..|. +|+++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 589999999999999999998886 799999763
No 441
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.75 E-value=0.2 Score=47.61 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=28.0
Q ss_pred ccEEEECCCHHHHHHHHHHHH-CCCcEEEEC
Q 017240 108 LDLVVIGCGPAGLALAAESAK-LGLNVGLIG 137 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~-~G~~V~liE 137 (375)
..|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999998
No 442
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.75 E-value=0.35 Score=44.41 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC----CcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG----LNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G----~~V~liE~~~ 140 (375)
..|.|||+|..|.+.|..|.+.| ++|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 7999998864
No 443
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.73 E-value=0.29 Score=44.12 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..++|||+|.+|.++|..|++.|. +|+|+.+..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999998 899998774
No 444
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.73 E-value=0.26 Score=47.38 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.++.|||.|..|+.+|..|++.|++|+++|.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999999999999999999999999999874
No 445
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.63 E-value=0.33 Score=41.23 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|+|+|| |..|..++..|.+.|++|+++.+..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5899996 9999999999999999999998764
No 446
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.59 E-value=0.21 Score=44.81 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|+|.+|.++|..|++.|.+|+|+.+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 47999999999999999999999999999876
No 447
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.56 E-value=0.44 Score=42.86 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC---cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL---NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~---~V~liE~~~ 140 (375)
..|.|||+|-.|.+.|..|.+.|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999874
No 448
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.54 E-value=0.31 Score=48.52 Aligned_cols=35 Identities=26% Similarity=0.151 Sum_probs=32.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~ 142 (375)
-.|+|||+|..|..+|..|.+.|++|++||+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 58999999999999999999999999999987654
No 449
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.54 E-value=0.34 Score=47.40 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999763
No 450
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.54 E-value=0.3 Score=44.27 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
...|.|||+|..|..+|..|...|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 357999999999999999999999999999876
No 451
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.51 E-value=0.37 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..|+|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 579999999999999999999998 69999876
No 452
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.51 E-value=0.3 Score=43.17 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|.+.|.+|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 579999999999999999999999999998763
No 453
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.50 E-value=0.33 Score=43.02 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~ 138 (375)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 454
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.47 E-value=0.22 Score=46.32 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHCC-------CcEEEECCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLG-------LNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G-------~~V~liE~~~~ 141 (375)
..|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998753
No 455
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.47 E-value=0.27 Score=48.00 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~ 140 (375)
..|.|||.|..|+.+|..|++. |++|++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999998753
No 456
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.44 E-value=0.31 Score=44.35 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
...|.|||+|..|..+|..|...|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999876
No 457
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.44 E-value=0.4 Score=42.78 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 469999999999999999999999999998764
No 458
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.43 E-value=0.35 Score=42.95 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
.++|||+|.+|-+++..|.+.|. +|+|+.+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999998 89999876
No 459
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.42 E-value=0.34 Score=41.38 Aligned_cols=31 Identities=35% Similarity=0.523 Sum_probs=28.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEECCC
Q 017240 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 109 DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.|+|.|| |..|..++..|.+.|++|+++.+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4999998 999999999999999999999876
No 460
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=89.42 E-value=0.44 Score=44.17 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999998764
No 461
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.17 E-value=0.39 Score=45.91 Aligned_cols=32 Identities=28% Similarity=0.298 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|||.|..|..+|..|...|.+|+++|++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999976
No 462
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.15 E-value=0.46 Score=43.97 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
...|+|||+|..|.++|+.|+..|. +++|+|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3689999999999999999999997 89999975
No 463
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.14 E-value=0.29 Score=47.61 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHC--CCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~--G~~V~liE~~~ 140 (375)
..|.|||.|..|+.+|..|++. |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999998763
No 464
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.11 E-value=0.46 Score=41.72 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC----cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL----NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~----~V~liE~~~ 140 (375)
..|.|||+|..|.+.|..|.+.|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999864
No 465
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.10 E-value=0.44 Score=42.35 Aligned_cols=31 Identities=32% Similarity=0.399 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
.|+|||+|.+|.+.|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999876
No 466
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.10 E-value=0.39 Score=49.35 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 467
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=89.07 E-value=0.37 Score=45.59 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=32.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCCCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 143 (375)
..++|+|+|..|.++|..++..|++|+|+|....+.
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 589999999999999999999999999999876543
No 468
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.05 E-value=0.55 Score=44.12 Aligned_cols=33 Identities=27% Similarity=0.492 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|..|..++..+.+.|++|++++...
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 579999999999999999999999999998654
No 469
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.77 E-value=0.37 Score=44.22 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..++|+|+|.+|.++|..|++.|. +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 579999999999999999999998 79999876
No 470
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.76 E-value=0.27 Score=44.25 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 54
No 471
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=88.74 E-value=0.37 Score=46.37 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
..|+|||+|..|..+|..|+..|. +++|+|.+.
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 579999999999999999999998 799998764
No 472
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.69 E-value=0.41 Score=41.41 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=30.4
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|.|| |..|..++..|.+.|++|+++.+..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 57999998 9999999999999999999998764
No 473
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=88.56 E-value=0.51 Score=45.94 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999998763
No 474
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.55 E-value=0.53 Score=42.25 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...++|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3579999999999999999999996 89999876
No 475
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.54 E-value=0.33 Score=43.88 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..++|+|+|.+|.++|..|++.| +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999876
No 476
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=88.40 E-value=0.39 Score=45.72 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..|+|||+|..|..+|..|...|. +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 479999999999999999999998 89999876
No 477
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.30 E-value=0.36 Score=43.04 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999998764
No 478
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.23 E-value=0.58 Score=43.51 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=29.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 108 LDLVVIGC-GPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGg-G~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
.+|+|||+ |..|.++|+.++..|. +|+++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 57999997 9999999999999995 89999975
No 479
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=88.22 E-value=1 Score=45.52 Aligned_cols=54 Identities=13% Similarity=0.132 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCceEE-EEEEEEEEEcC--CceEEEEecCCeEEecCEEEEccC
Q 017240 191 HLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASG 244 (375)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~V~~~~g~~i~a~~vI~A~G 244 (375)
..+.+.|.+.+...|++++ ++.|..|..++ +....|.+.+|+++.||.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 4788999999999999999 99999998776 445667777899999999998544
No 480
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.16 E-value=0.5 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..|+|+|.|..|..+|..|.+.|.+|++.|.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 56999999999999999999999999999864
No 481
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=88.11 E-value=0.39 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.4
Q ss_pred cccEEEECC-CHHHHHHHHHHHHCCC-------cEEEECCC
Q 017240 107 ILDLVVIGC-GPAGLALAAESAKLGL-------NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGg-G~aGl~aA~~La~~G~-------~V~liE~~ 139 (375)
...|+|||| |..|..++..|...|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 368999998 9999999999999886 79999865
No 482
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.05 E-value=0.49 Score=43.26 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEECCCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~~ 140 (375)
.|+|||+|..|.++|+.|+..|+ +++|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999888 699999764
No 483
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.02 E-value=0.54 Score=43.38 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
..+|+|||+|..|.++|+.|+..+. ++.|+|.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999998886 79999875
No 484
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.02 E-value=0.47 Score=43.60 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
..|+|||+|..|.++|+.|+..+. ++.|+|.+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 689999999999999999999887 79999875
No 485
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.64 E-value=0.48 Score=42.66 Aligned_cols=32 Identities=38% Similarity=0.436 Sum_probs=29.5
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 108 LDLVVIG-CGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIG-gG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
..++|+| +|.+|.++|..|++.|.+|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4699999 9999999999999999999999875
No 486
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=87.62 E-value=0.56 Score=44.05 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 106 ~~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
....|+|+|+|..|...+..+.+.|++|++++..+
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 34689999999999999999999999999997653
No 487
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.61 E-value=0.68 Score=43.58 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|..|..+|..+.+.|++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999998653
No 488
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.42 E-value=0.54 Score=42.16 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..|+|||+|.+|-+++..|.+.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 479999999999999999999997 79999876
No 489
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.41 E-value=0.55 Score=43.01 Aligned_cols=32 Identities=28% Similarity=0.502 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
..++|+|+|.+|.++|..|++.|. +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 579999999999999999999998 79999876
No 490
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.36 E-value=0.46 Score=42.87 Aligned_cols=33 Identities=18% Similarity=0.063 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...++|+|+|.+|-++|..|.+.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3579999999999999999999998 89999876
No 491
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=87.36 E-value=0.52 Score=42.49 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCC-cEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~-~V~liE~~ 139 (375)
...++|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3579999999999999999999996 89999876
No 492
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.32 E-value=0.5 Score=42.92 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC--cEEEECCC
Q 017240 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPD 139 (375)
Q Consensus 109 DVvIIGgG~aGl~aA~~La~~G~--~V~liE~~ 139 (375)
+|.|||+|-.|.++|+.|...+. ++.|+|..
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 69999999999999999998875 69999865
No 493
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.16 E-value=0.85 Score=43.55 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|||+|..|..++..+.+.|++|++++..+
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 579999999999999999999999999998653
No 494
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.07 E-value=0.6 Score=39.01 Aligned_cols=33 Identities=24% Similarity=0.472 Sum_probs=29.9
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
..|+|+|| |..|..++..|.+.|++|+++.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999998764
No 495
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.85 E-value=0.6 Score=41.93 Aligned_cols=32 Identities=28% Similarity=0.270 Sum_probs=29.6
Q ss_pred cEEEECC-CHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 109 DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.|+|.|| |..|..++..|.++|++|+++-|++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5999998 9999999999999999999997764
No 496
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.84 E-value=0.91 Score=41.95 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
...|.|||.|..|...|..|+..|.+|+++++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 3579999999999999999999999999999764
No 497
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.82 E-value=0.67 Score=47.67 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
.-.|.|||+|..|.-.|..++..|++|+|+|...
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3589999999999999999999999999999764
No 498
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.68 E-value=0.7 Score=42.77 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHCCCcEEEECCCC
Q 017240 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (375)
Q Consensus 108 ~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~~ 140 (375)
-.|+|+|+|+.|+.++..+...|.+|++++...
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999998653
No 499
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=86.60 E-value=0.82 Score=41.17 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=30.9
Q ss_pred ccEEEECC-CHHHHHHHHHHHHCCCcEEEECCCCC
Q 017240 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDLP 141 (375)
Q Consensus 108 ~DVvIIGg-G~aGl~aA~~La~~G~~V~liE~~~~ 141 (375)
..|+|.|| |..|..++..|.+.|++|+++.+...
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999998 99999999999999999999987644
No 500
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.60 E-value=0.69 Score=44.26 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHCCCcEEEECCC
Q 017240 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (375)
Q Consensus 107 ~~DVvIIGgG~aGl~aA~~La~~G~~V~liE~~ 139 (375)
...|+|||.|..|..+|..|...|.+|+++|++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~ 243 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVD 243 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999986
Done!