BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017243
         (375 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
 pdb|2FON|B Chain B, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
 pdb|2FON|C Chain C, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/370 (81%), Positives = 332/370 (89%)

Query: 1   MKFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQ 60
           MKFGNGAYN+MDNGVL F+HVRIPR+QMLMRVSQVT+EGKYVQS++PRQLLYGTMVYVRQ
Sbjct: 246 MKFGNGAYNSMDNGVLSFDHVRIPRDQMLMRVSQVTKEGKYVQSDIPRQLLYGTMVYVRQ 305

Query: 61  TIVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRF 120
           +IVADAS A+SRAVCIATRYSAVRRQFGS+NGG ETQVIDYKTQQNRLFPLLASAYAFRF
Sbjct: 306 SIVADASLAMSRAVCIATRYSAVRRQFGSQNGGQETQVIDYKTQQNRLFPLLASAYAFRF 365

Query: 121 VGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLC 180
           VGEWLKWLYTDVTQRL ANDFSTLPEAHACTAGLKSLTT+ATADGIEECRKLCGGHGYLC
Sbjct: 366 VGEWLKWLYTDVTQRLAANDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCGGHGYLC 425

Query: 181 SSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQ 240
           SSGLPELFAVYVPACTYEGDN+VL LQVARFLMKT+SQLG G  PVGT +YMGR E LMQ
Sbjct: 426 SSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQ 485

Query: 241 CHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXH 300
           C   V++AEDWL PSA+LEAFEAR+ RMSVACA+NLSKF NQEEGF             H
Sbjct: 486 CRSDVKQAEDWLKPSAVLEAFEARSARMSVACAKNLSKFENQEEGFAELAADLVEAAVAH 545

Query: 301 CQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLAN 360
           CQLIVVSK+IEKLQQ+IPGKGVK  LE+LC IY+L ++HKH GDF+ TG IT+KQ SLAN
Sbjct: 546 CQLIVVSKYIEKLQQNIPGKGVKQQLEVLCGIYSLFILHKHQGDFLGTGYITSKQGSLAN 605

Query: 361 EQLRSLYSQV 370
           +QLR+LYSQ+
Sbjct: 606 DQLRALYSQL 615


>pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1
 pdb|1W07|B Chain B, Arabidopsis Thaliana Acyl-Coa Oxidase 1
          Length = 659

 Score =  625 bits (1611), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 297/369 (80%), Positives = 326/369 (88%)

Query: 2   KFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQT 61
           K GNGAYN+MDNG L F+HVRIPR+QMLMR+S+VTREG+YV S+VP+QL+YGTMVYVRQT
Sbjct: 228 KMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQT 287

Query: 62  IVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFV 121
           IVADAS ALSRAVCIATRYSAVRRQFG+ NGG ETQVIDYKTQQNRLFPLLASAYAFRFV
Sbjct: 288 IVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFV 347

Query: 122 GEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 181
           GEWLKWLYTDVT+RL A+DF+TLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYL  
Sbjct: 348 GEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWC 407

Query: 182 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQC 241
           SGLPELFAVYVPACTYEGDN+VL LQVARFLMKTV+QLG G +PVGTT YMGRA  L+QC
Sbjct: 408 SGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQC 467

Query: 242 HCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXHC 301
             GVQKAEDWLNP  +LEAFEARA+RM+V CA+NLSKF NQE+GF             HC
Sbjct: 468 RSGVQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHC 527

Query: 302 QLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANE 361
           QLIVVSKFI KL+QDI GKGVK  L  LC+IYAL+L+HKHLGDF+ST CIT KQASLAN+
Sbjct: 528 QLIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLAND 587

Query: 362 QLRSLYSQV 370
           QLRSLY+QV
Sbjct: 588 QLRSLYTQV 596


>pdb|1IS2|A Chain A, Crystal Structure Of Peroxisomal Acyl-coa Oxidase-ii From
           Rat Liver
 pdb|1IS2|B Chain B, Crystal Structure Of Peroxisomal Acyl-coa Oxidase-ii From
           Rat Liver
 pdb|2DDH|A Chain A, Crystal Structure Of Acyl-Coa Oxidase Complexed With
           3-Oh-Dodecanoate
          Length = 661

 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 220/376 (58%), Gaps = 12/376 (3%)

Query: 2   KFGNGAYNTMDNGVLRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQT 61
           KFG   Y  MDNG L+ ++ RIPR  MLM+ +QV  +G YV+  +  +L YGTMV+VR  
Sbjct: 229 KFG---YEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKP-LSNKLTYGTMVFVRSF 284

Query: 62  IVADASCALSRAVCIATRYSAVRRQFGSKNGGPETQVIDYKTQQNRLFPLLASAYAFRFV 121
           +V +A+ +LS+A  IA RYSAVRRQ   K   PE Q++D++TQQ +LFPLLA+AYAF FV
Sbjct: 285 LVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFV 344

Query: 122 GEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCS 181
           G ++K  Y  + + +   D S LPE HA TAGLK+ TT     GIEECR  CGGHGY  S
Sbjct: 345 GRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHS 404

Query: 182 SGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR--AEQLM 239
           SG+P ++  + PACT+EG+N V++LQ ARFLMK   Q+  G +  G  +Y+    ++++ 
Sbjct: 405 SGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLNDLPSQRIQ 464

Query: 240 QCHCGVQKAEDWLNP-SAILEAFEARAIRMSVACAQNL----SKFTNQEEGFXXXXXXXX 294
                V      +N    + EA++ RA R+    A+NL    S   ++E  +        
Sbjct: 465 PQQVAVWPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLV 524

Query: 295 XXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAK 354
                HC  +VV  F +KL + I  K V+ +L  LC +Y+L+ + +  GDF+    IT  
Sbjct: 525 RASEAHCHYVVVKVFSDKLPK-IQDKAVQAVLRNLCLLYSLYGISQKGGDFLEGSIITGA 583

Query: 355 QASLANEQLRSLYSQV 370
           Q S  N ++  L + +
Sbjct: 584 QLSQVNARILELLTLI 599


>pdb|3PFD|A Chain A, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 pdb|3PFD|B Chain B, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 pdb|3PFD|C Chain C, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
 pdb|3PFD|D Chain D, Crystal Structure Of An Acyl-Coa Dehydrogenase From
           Mycobacterium Thermoresistibile Bound To Reduced Flavin
           Adenine Dinucleotide Solved By Combined Iodide Ion Sad
           Mr
          Length = 393

 Score = 31.6 bits (70), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 40/204 (19%)

Query: 16  LRFEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVC 75
           L FE+ RIP ++++             +     +    T+ + R TI A A      A+ 
Sbjct: 225 LYFENCRIPGDRIIG------------EPGTGFKTALATLDHTRPTIGAQAVGIAQGALD 272

Query: 76  IATRYSAVRRQFG---SKNGGPETQVID--YKTQQNRLFPLLASAYAFRFVGEWLKWLYT 130
            A  Y+  R+QFG   S N G +  + D   K +  RL    A+A A R  G        
Sbjct: 273 AAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEG-------- 324

Query: 131 DVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAV 190
                    D   +  A  C A    +    T D ++    L GG+GY     +  +   
Sbjct: 325 ---------DLGFISAASKCFA--SDVAMEVTTDAVQ----LFGGYGYTQDFPVERMMRD 369

Query: 191 YVPACTYEGDNIVLLLQVARFLMK 214
                 YEG N +  + ++R L++
Sbjct: 370 AKITQIYEGTNQIQRVVMSRALLR 393


>pdb|1UDY|A Chain A, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 pdb|1UDY|B Chain B, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 pdb|1UDY|C Chain C, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
 pdb|1UDY|D Chain D, Medium-Chain Acyl-Coa Dehydrogenase With
           3-Thiaoctanoyl-Coa
          Length = 396

 Score = 30.8 bits (68), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 12/71 (16%)

Query: 18  FEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIA 77
           FE VR+P+  +L      T EG   +      +  GT    R  + A A     RA+  A
Sbjct: 227 FEDVRVPKENVL------TGEGAGFK------IAMGTFDKTRPPVAAGAVGLAQRALDEA 274

Query: 78  TRYSAVRRQFG 88
           T+Y+  R+ FG
Sbjct: 275 TKYALERKTFG 285


>pdb|3DJL|A Chain A, Crystal Structure Of Alkylation Response Protein E. Coli
           Aidb
 pdb|3U33|A Chain A, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|B Chain B, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|C Chain C, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|D Chain D, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|E Chain E, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|F Chain F, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|G Chain G, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|H Chain H, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|I Chain I, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|J Chain J, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|K Chain K, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
 pdb|3U33|L Chain L, Crystal Structure Of The E. Coli Adaptive Response Protein
           Aidb In The Space Group P3(2)
          Length = 541

 Score = 30.8 bits (68), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 11/101 (10%)

Query: 114 SAYAFRFVGEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLC 173
           +A  FR    W +    D  + L A  F+   +   C  G+           + E  ++ 
Sbjct: 352 TALLFRLARAWDR--RADAKEALWARLFTPAAKFVICKRGMPF---------VAEAMEVL 400

Query: 174 GGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMK 214
           GG GY   S LP L+        +EG   ++ L V R L K
Sbjct: 401 GGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNK 441


>pdb|3MDD|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 pdb|3MDD|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 pdb|3MDE|A Chain A, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
 pdb|3MDE|B Chain B, Crystal Structures Of Medium Chain Acyl-Coa Dehydrogenase
           From Pig Liver Mitochondria With And Without Substrate
          Length = 385

 Score = 30.8 bits (68), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 12/71 (16%)

Query: 18  FEHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLLYGTMVYVRQTIVADASCALSRAVCIA 77
           FE VR+P+  +L      T EG   +      +  GT    R  + A A     RA+  A
Sbjct: 217 FEDVRVPKENVL------TGEGAGFK------IAMGTFDKTRPPVAAGAVGLAQRALDEA 264

Query: 78  TRYSAVRRQFG 88
           T+Y+  R+ FG
Sbjct: 265 TKYALERKTFG 275


>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With Adenosine
           5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
 pdb|1CJT|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           Beta-L-2',3'-Dideoxyatp, Mn, And Mg
 pdb|1CJU|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           Beta-L-2',3'-Dideoxyatp And Mg
 pdb|1CJV|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           Beta-L-2',3'-Dideoxyatp, Mg, And Zn
 pdb|1CUL|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
 pdb|1TL7|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
           Adenylyl Cyclase: Complex With 2'(3')-O-(N-
           Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
          Length = 217

 Score = 29.6 bits (65), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 175 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR 234
           G  Y C SGLPE  A +   C   G +++  + + R +          NM VG   + GR
Sbjct: 76  GDCYYCVSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNV-----NMRVG--IHSGR 128

Query: 235 AEQLMQCHCGVQKAEDW 251
                  HCGV     W
Sbjct: 129 V------HCGVLGLRKW 139


>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase
          Length = 220

 Score = 29.6 bits (65), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 175 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR 234
           G  Y C SGLPE  A +   C   G +++  + + R +          NM VG   + GR
Sbjct: 84  GDCYYCVSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNV-----NMRVG--IHSGR 136

Query: 235 AEQLMQCHCGVQKAEDW 251
                  HCGV     W
Sbjct: 137 V------HCGVLGLRKW 147


>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
           Mg
 pdb|1U0H|A Chain A, Structural Basis For The Inhibition Of Mammalian Adenylyl
           Cyclase By Mant-gtp
 pdb|2GVD|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
           Adenylyl Cyclase: Complex With Tnp-Atp And Mn
 pdb|2GVZ|A Chain A, Crystal Structure Of Complex Of Gs- With The Catalytic
           Domains Of Mammalian Adenylyl Cyclase: Complex With
           Mant- Atp And Mn
 pdb|3C14|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
           And Ca
 pdb|3C15|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
           And Mg
 pdb|3C16|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With
           Adenosine-5'-Triphosphate And Ca
 pdb|3G82|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
 pdb|3MAA|A Chain A, Complex Of Gs-alpha With The Catalytic Domains Of
           Mammalian Adenylyl Cyclase: Complex With Adenosine
           5-o-(l-thiophosphate) And Low Ca Concentration
          Length = 225

 Score = 29.6 bits (65), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 175 GHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGR 234
           G  Y C SGLPE  A +   C   G +++  + + R +          NM VG   + GR
Sbjct: 84  GDCYYCVSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNV-----NMRVG--IHSGR 136

Query: 235 AEQLMQCHCGVQKAEDW 251
                  HCGV     W
Sbjct: 137 V------HCGVLGLRKW 147


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.135    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,292,556
Number of Sequences: 62578
Number of extensions: 387795
Number of successful extensions: 931
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 14
length of query: 375
length of database: 14,973,337
effective HSP length: 100
effective length of query: 275
effective length of database: 8,715,537
effective search space: 2396772675
effective search space used: 2396772675
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)