Your job contains 1 sequence.
>017244
MCSSKSKLHSATQINGRPVLQPTSNQVPSLEKRNSIKKTGSPKSPITTDNVNSKSFTKSL
LSPPVSPKLKSPRPAAVKRGNDPNVLNTSAEKIMTPKKLASLVKKPKNVGVAPCYDSSLI
VEAPGSIAAARREHVAIMQEQRKLRIAHYGRTKSAKFEGKVPGLDSFANGDNNDREEKRC
SFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREAFSG
FDAEVVAKFTEKKMTSLSANYAIDLSQVRGIVDNSIRILEVKKQFGSFDKYLWGFVNHKP
INTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITCTRHLQ
CTALASHQPAVAPAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017244
(375 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 883 8.0e-91 2
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 877 8.6e-88 1
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 565 1.3e-57 2
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 576 6.8e-56 1
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 559 4.3e-54 1
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 555 1.1e-53 1
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 553 1.9e-53 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 482 6.2e-46 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 454 5.7e-43 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 392 2.1e-36 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 391 2.7e-36 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 388 5.7e-36 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 385 1.2e-35 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 379 5.1e-35 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 379 5.1e-35 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 310 1.0e-27 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 301 9.4e-27 1
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 883 (315.9 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 174/266 (65%), Positives = 206/266 (77%)
Query: 104 KKPKNVGVAPCYDSSLIVEAPGSIAAARREHVAIMQEQRKLRIAHYGRTKSA-KF-EGKV 161
KK K+ Y S LI EAPGSIAA RRE VA Q RKL+IAHYGR+KS F KV
Sbjct: 50 KKSKSFKEGDSYSSWLITEAPGSIAAVRREQVAAQQALRKLKIAHYGRSKSTINFTSSKV 109
Query: 162 PGLDSFANGDNNDREEKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVG 221
L N + N + RCSF+TP SDPIYVAYHDEEWGVPVHDDK LFELL L+ AQVG
Sbjct: 110 VPL---LNPNPNPHPQ-RCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVG 165
Query: 222 SDWTSVLKKRQAFREAFSGFDAEVVAKFTEKKMTSLSANYAIDLSQVRGIVDNSIRILEV 281
SDWTS L+KR +R+AF F+AEVVAK TEK+M ++S Y I++S+VRG+V+N+ +I+E+
Sbjct: 166 SDWTSTLRKRHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSKVRGVVENAKKIVEI 225
Query: 282 KKQFGSFDKYLWGFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSF 341
KK F S +KYLWGFVNHKPI+T Y+ KIPVKTSKSE+ISKDMV++GFRFVGPTV+HSF
Sbjct: 226 KKAFVSLEKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSF 285
Query: 342 MQAAGLTNDHLITCTRHLQCTALASH 367
MQAAGLTNDHLITC RH CT LA++
Sbjct: 286 MQAAGLTNDHLITCCRHAPCTLLATN 311
Score = 42 (19.8 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 11 ATQINGRPVLQPTS-NQVPSLE---KRNSIKKTGSPKSPITTDNVNSKSFTXXXXXXXXX 66
A + R +L P+S N + KR+S+ G+ K + + SKSF
Sbjct: 6 AISLTKRGMLPPSSCNSLMDRSESLKRDSVMGNGAAKVRGSLERKKSKSFKEGDSYSSWL 65
Query: 67 XXXXXXRPAAVKR 79
AAV+R
Sbjct: 66 ITEAPGSIAAVRR 78
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 168/248 (67%), Positives = 202/248 (81%)
Query: 119 LIVEAPGSIAAARREHVAIMQEQRKLRIAHYGRTKSAKFEGKVPGLDSFANGDNNDREEK 178
++ + PGSIAAARRE VA+ QE+RK +I+HYGR KS K K N + ++K
Sbjct: 113 IVQKQPGSIAAARREEVAMKQEERKKKISHYGRIKSVKSNEK--------NLNVEHEKKK 164
Query: 179 RCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREAF 238
RCSFIT +SDPIYVAYHD+EWGVPVHDD LLFELLVLT AQVGSDWTSVLK+R FREAF
Sbjct: 165 RCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREAF 224
Query: 239 SGFDAEVVAKFTEKKMTSLSANYAIDLSQVRGIVDNSIRILEVKKQFGSFDKYLWGFVNH 298
SGF+AE+VA F EKK+ S+ +Y I+LSQV +VDN+ +IL+VK+ GSF+KY+WGF+ H
Sbjct: 225 SGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNKYIWGFMKH 284
Query: 299 KPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITCTRH 358
KP+ T+Y S QKIPVKTSKSE ISKDMV++GFRFVGPTVIHS MQAAGLTNDHLITC RH
Sbjct: 285 KPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITCPRH 344
Query: 359 LQCTALAS 366
L+CTA+A+
Sbjct: 345 LECTAMAA 352
Score = 233 (87.1 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 67/166 (40%), Positives = 91/166 (54%)
Query: 1 MCSSKSK---LHSATQINGRPVLQPTSNQVPSLEKRNSIKKTG-SPKSPITTDNVNSKSF 56
MCSSK K + +QINGRPVLQP SNQVP+L++RNS+KK+ P +PI + + S
Sbjct: 1 MCSSKLKNLTQENISQINGRPVLQPKSNQVPTLDRRNSLKKSPPKPLNPIAS-KIPSPRP 59
Query: 57 TXXXXXXXXXXXXXXXRPAAVKRGNDPNVLNTSAEKIMTPKKLASLVKKPKNV--GVAPC 114
+PA G+ +L +S+ K K + S P+N G
Sbjct: 60 ISLISPPLSPNTKSLRKPA----GSCKELLRSSSTK---SKPVIS----PENSDGGYKEV 108
Query: 115 YDSSLIVEAPGSIAAARREHVAIMQEQRKLRIAHYGRTKSAKFEGK 160
++ + PGSIAAARRE VA+ QE+RK +I+HYGR KS K K
Sbjct: 109 MPMVIVQKQPGSIAAARREEVAMKQEERKKKISHYGRIKSVKSNEK 154
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 565 (203.9 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 102/186 (54%), Positives = 138/186 (74%)
Query: 178 KRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREA 237
KRC +ITPNSDPIYV +HDEEWGVPV DDK LFELLV + A W S+L++R FR+
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 238 FSGFDAEVVAKFTEKKMTSLSANYAIDLSQ--VRGIVDNSIRILEVKKQFGSFDKYLWGF 295
F FD +A+FTEK++ SL N + LS+ +R IV+N+ +L+VK++FGSF Y W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238
Query: 296 VNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITC 355
VNHKP+ YR +++PVK+ K+E ISKDM+++GFR VGPTV++SF+QA+G+ NDHL C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298
Query: 356 TRHLQC 361
R+ +C
Sbjct: 299 FRYQEC 304
Score = 45 (20.9 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 20/107 (18%), Positives = 43/107 (40%)
Query: 1 MCSSKSKLH-SATQINGRPVLQPTSNQVPSLEKRNSIKKTGSPKSPITTDNVNSKSFTXX 59
+CS+ ++ + T++ +P L P + P+ +K +S ++TD+ +S S +
Sbjct: 21 LCSTGNRFKVTKTEMTKKPQLNPRVTKSPATKKPDS-------NFSVSTDDSSSSSSSSE 73
Query: 60 XXXXXXXXXXXXXRPAAVKRGNDPNVLNTSAEKIMTPKKLASLVKKP 106
P+ KR N LN + + ++ + P
Sbjct: 74 RSSVNTTNSGKVTTPS--KR-NGVEKLNNVVASVAVVEDISPKIPGP 117
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 137/355 (38%), Positives = 201/355 (56%)
Query: 14 INGRPVLQPTSNQVPSLEKRNSIKKTGSPKSPITTDNVNSKSFTXXXXXXXXXXXXXXXR 73
++G P +Q S V E R+++ T SP T SKS
Sbjct: 1 MSGAPRVQ--SMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERSSSGRTGSDEKT 58
Query: 74 PAAVKRGNDPNVLNTSAEKIMTPKKLASLVKKPKNVGVAPCYDSSLIVEAPGSIAAARRE 133
A +++S++K T + L + +N+ +S+L + A S A+
Sbjct: 59 SYATPT----ETVSSSSQK-HTLNAASILRRHEQNL------NSNLSLNASFSSDASMDS 107
Query: 134 HVAIMQEQRKLRIAHYG-RTKS--AKFEGKVP--GLDSFANGDNNDREEKRCSFITPNSD 188
+ R +R G R+KS +K V LDS NG +KRC+++TPNSD
Sbjct: 108 FHSRASTGRLIRSYSVGSRSKSYPSKPRSVVSEGALDSPPNGSET---KKRCTWVTPNSD 164
Query: 189 PIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREAFSGFDAEVVAK 248
P Y+ +HDEEWGVPVHDDK LFELLVL+ A W ++L KRQAFRE F+ FD + K
Sbjct: 165 PCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVK 224
Query: 249 FTEKKMTSLSANYAIDLS--QVRGIVDNSIRILEVKKQFGSFDKYLWGFVNHKPINTQYR 306
EKK+ + + LS ++R +++N+ +IL+V +++GSFDKY+W FV +K I +++R
Sbjct: 225 INEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFR 284
Query: 307 SSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITCTRHLQC 361
+++P KT K+E ISKD+V++GFR VGPTV++SFMQAAG+TNDHL +C R C
Sbjct: 285 YQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 125/268 (46%), Positives = 163/268 (60%)
Query: 97 KKLASLVKKPKNVGVAPCYDSSLIVEAPGSIAAARREHVAIMQEQRKLRIAHYGRTKSAK 156
K AS+ + + C S L V + S R ++ RKL + K
Sbjct: 80 KNSASMTASYSSDASSSCESSPLSVASSSSCKKVVRRSGSV-SSTRKLSVG--------K 130
Query: 157 FEGKVPGLDSFANGDNNDREEKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLT 216
E KV G D FA+G KRC++ITP +DP YVA+HDEEWGVPVHDDK LFELL L+
Sbjct: 131 EEEKVSG-DCFADG------RKRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLS 183
Query: 217 AAQVGSDWTSVLKKRQAFREAFSGFDAEVVAKFTEKKMTSLSANYAIDL-SQV--RGIVD 273
A WT +L +R RE F FD VA+ +KK+T+ AI L S+V R I+D
Sbjct: 184 GALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTA-PGTAAISLLSEVKIRSILD 242
Query: 274 NSIRILEVKKQFGSFDKYLWGFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFV 333
NS + ++ + GS KY+W FVN+KP +Q+R +++PVKTSK+E ISKD+V++GFR V
Sbjct: 243 NSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSV 302
Query: 334 GPTVIHSFMQAAGLTNDHLITCTRHLQC 361
PTVI+SFMQAAGLTNDHLI C R+ C
Sbjct: 303 SPTVIYSFMQAAGLTNDHLIGCFRYQDC 330
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 100/196 (51%), Positives = 145/196 (73%)
Query: 172 NNDREEKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKR 231
N+ E KRC++IT SD +YV +HD++WGVPV+DD LLFE L ++ + +WT +LK++
Sbjct: 109 NSSDEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRK 168
Query: 232 QAFREAFSGFDAEVVAKFTEKKMTSLSANYAIDL--SQVRGIVDNSIRILEVKKQFGSFD 289
+ FREAF FD VAK EK++ +++N AI L S+VR IVDN+ I +V +FGSF
Sbjct: 169 EHFREAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFS 228
Query: 290 KYLWGFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTN 349
++WGF+++KPI +++ S+ +P+++ K+E ISKDM+K+GFRFVGP ++HSFMQAAGLT
Sbjct: 229 SFVWGFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTI 288
Query: 350 DHLITCTRHLQCTALA 365
DHL+ C RH C +LA
Sbjct: 289 DHLVDCFRHGDCVSLA 304
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 101/186 (54%), Positives = 134/186 (72%)
Query: 178 KRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREA 237
KRC++ITP SD Y+A+HDEEWGVPVHDDK LFELL L+ A W +L KRQ FRE
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193
Query: 238 FSGFDAEVVAKFTEKKMTS--LSANYAIDLSQVRGIVDNSIRILEVKKQFGSFDKYLWGF 295
F FD +++ T KK+TS ++A + ++R I++N+ ++ ++ FGSFDKY+W F
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253
Query: 296 VNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITC 355
VN KP +Q+R +++PVKTSK+E ISKD+V++GFR V PTVI+SFMQ AGLTNDHL C
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCC 313
Query: 356 TRHLQC 361
RH C
Sbjct: 314 FRHHDC 319
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 85/183 (46%), Positives = 129/183 (70%)
Query: 178 KRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREA 237
+RC + +DP+YVAYHD EWGVP HDD+ LFE+L+L AQ G W ++L+KR+A+R A
Sbjct: 3 QRCEWC--GTDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRRA 60
Query: 238 FSGFDAEVVAKFTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWGF 295
F+GFDAE VA ++E + L A+ I + ++ + N+ +L+++++FGS D YLW F
Sbjct: 61 FAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKIREEFGSLDAYLWRF 120
Query: 296 VNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITC 355
V+H P + +RS IP +T +S+A+SKD+ ++GF FVG T+ ++FMQA G+ NDH++ C
Sbjct: 121 VDHAPRHNAWRSLTDIPARTEQSDAMSKDLKRRGFNFVGSTICYAFMQAVGMVNDHVVHC 180
Query: 356 TRH 358
RH
Sbjct: 181 FRH 183
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 75/184 (40%), Positives = 131/184 (71%)
Query: 177 EKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFRE 236
++RC++++ +DP+Y+ YHD EWGVP++DD+LLFE L+L Q G W ++LKKR +R+
Sbjct: 18 KERCAWVS--NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYRD 75
Query: 237 AFSGFDAEVVAKFTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWG 294
+F+ FDA +++K+ +K+ L N I + +++ ++N+ LEVKK++ +F Y+W
Sbjct: 76 SFNNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEVKKEWRNFSDYIWH 135
Query: 295 FVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLIT 354
FV+ PI Q++++++IP +++ S+ +SKD+ K+GF+FVG T+ ++FMQA G+ NDH
Sbjct: 136 FVDGHPIQNQWKNAKQIPTRSAISDVLSKDLKKRGFKFVGSTICYAFMQAVGMVNDHTTN 195
Query: 355 CTRH 358
C R+
Sbjct: 196 CFRY 199
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 74/188 (39%), Positives = 122/188 (64%)
Query: 173 NDREEKRCSFI-TPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKR 231
+++ RC ++ T D YV YHDEEWGVPV++DK +FE LVL +AQ G W ++LKKR
Sbjct: 2 SEKNTCRCPWLDTSKLD--YVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKR 59
Query: 232 QAFREAFSGFDAEVVAKFTEKKMTSLSANYAIDL--SQVRGIVDNSIRILEVKKQFGSFD 289
+ +R+ F+ F+ VAKFT+ + L + +I ++ ++N+ R +E++ +FGSF
Sbjct: 60 EGYRKLFADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEFGSFT 119
Query: 290 KYLWGFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTN 349
K++W +VN++ I + + + S+A++KD+ K+GF+F+GPT ++S +QA GL N
Sbjct: 120 KFIWSYVNNETIVNNLDTIKDYVATSPISDALAKDLKKRGFKFLGPTTLYSHLQATGLIN 179
Query: 350 DHLITCTR 357
DH +C R
Sbjct: 180 DHSNSCFR 187
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 75/180 (41%), Positives = 112/180 (62%)
Query: 178 KRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREA 237
+RC +++ DP+Y+AYHD EWGVP D K LFE++ L Q G W +VLKKR+ +R
Sbjct: 2 ERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59
Query: 238 FSGFDAEVVAKFTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWGF 295
F FD VA E+ + L + I +++ I+ N+ L++++ F ++W F
Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSF 119
Query: 296 VNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITC 355
VNH+P TQ + +IP TS S+A+SK + K+GF+FVG T+ +SFMQA GL NDH++ C
Sbjct: 120 VNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 77/188 (40%), Positives = 111/188 (59%)
Query: 176 EEKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFR 235
EE RC++++ DP+Y YHD WG PV+D K LF L L Q G W ++LKK+Q +
Sbjct: 2 EEIRCNWVS--DDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYE 59
Query: 236 EAFSGFDAEVVAKFTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLW 293
+AF+ F+ V+A F + K+ L AN I + ++ I+ N+ L F +LW
Sbjct: 60 QAFADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLW 119
Query: 294 GFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLI 353
FV KP Q+ S +IP +T +SEA+SK + K GF FVGPT+ ++FMQA G+ NDHL+
Sbjct: 120 SFVGGKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLV 179
Query: 354 TCTRHLQC 361
C + C
Sbjct: 180 DCVAYDAC 187
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 71/185 (38%), Positives = 112/185 (60%)
Query: 176 EEKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFR 235
E C + P +DPIY AYHDEEWGVP D + L+E L L Q G W ++L+KR++ R
Sbjct: 3 EPHSCGW-APVTDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIR 61
Query: 236 EAFSGFDAEVVAKFTEKKMTSLSANYAIDLS--QVRGIVDNSIRILEVKKQFGSFDKYLW 293
E F FD E +A++T ++ N I S ++ ++ N+ L + + F Y W
Sbjct: 62 EEFDEFDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNARSYLSMMEAGDDFSDYCW 121
Query: 294 GFVNHKPINTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLI 353
G+V KP+ ++++ ++ P T S A+S+D+ K+GF+FVGPT+++++ QA G+ NDH +
Sbjct: 122 GYVGGKPVVNKWKNFREAPTSTDWSAAMSRDLKKRGFKFVGPTIVYAWAQAVGMVNDHEV 181
Query: 354 TCTRH 358
C RH
Sbjct: 182 GCPRH 186
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 71/172 (41%), Positives = 106/172 (61%)
Query: 189 PIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREAFSGFDAEVVAK 248
P+ YHD+EWG VHDD LFE L L AQ G W +VLKKR+ +R+AF G+D + +A+
Sbjct: 16 PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFLGYDLQRLAQ 75
Query: 249 FTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWGFVNHKPINTQYR 306
E + + A Y + ++ + N+ L ++++FGS D LW FV +P ++
Sbjct: 76 CDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVGGQPKINRWV 135
Query: 307 SSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITCTRH 358
S +P T +S+A+SK + K+GF+FVG T+ ++FMQA GL NDHL+ C H
Sbjct: 136 SMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNH 187
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 71/172 (41%), Positives = 106/172 (61%)
Query: 189 PIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFREAFSGFDAEVVAK 248
P+ YHD+EWG VHDD LFE L L AQ G W +VLKKR+ +R+AF G+D + +A+
Sbjct: 16 PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFLGYDLQRLAQ 75
Query: 249 FTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWGFVNHKPINTQYR 306
E + + A Y + ++ + N+ L ++++FGS D LW FV +P ++
Sbjct: 76 CDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVGGQPKINRWV 135
Query: 307 SSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLITCTRH 358
S +P T +S+A+SK + K+GF+FVG T+ ++FMQA GL NDHL+ C H
Sbjct: 136 SMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNH 187
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 68/182 (37%), Positives = 104/182 (57%)
Query: 177 EKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFRE 236
+ RC + NS P + YHD EWG PV DD+ LFE L L + Q G W ++L KR+ FR
Sbjct: 11 QPRCRWC--NSAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTILAKRENFRA 68
Query: 237 AFSGFDAEVVAKFTEKKMTSLSANYAI--DLSQVRGIVDNSIRILEVKKQFGSFDKYLWG 294
AF GFD +A + + L + I ++ +++N+ R+ ++ + GS Y+W
Sbjct: 69 AFDGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHGSLAAYVWS 128
Query: 295 FVNHKPINT-QYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQAAGLTNDHLI 353
+ KP + + +++ IP T A+SKD+ K+G++FVGPT + +FMQA GL NDH
Sbjct: 129 Y-EPKPEDLPEPQTASIIPAST----AMSKDLKKRGWKFVGPTTVFAFMQAMGLVNDHAR 183
Query: 354 TC 355
C
Sbjct: 184 GC 185
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 68/191 (35%), Positives = 109/191 (57%)
Query: 177 EKRCSFITPNSDPIYVAYHDEEWGVPVHDDKLLFELLVLTAAQVGSDWTSVLKKRQAFRE 236
+KRC +I+ D Y+ YHD EWG D + LFE + L A Q G W +VLKKRQ +R+
Sbjct: 90 KKRCFWISLTKDEEYIHYHDNEWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYRD 149
Query: 237 AFSGFDAE-VVAKFTEKKM-TSLSANYAIDLSQVR--GIVDNSIRILEVKKQFG-SFDKY 291
+F FD + +V T + + SL N + ++++ IVDN+ L+++ Q F +
Sbjct: 150 SFYNFDPKLIVDNITPEVIENSLMKNTGLIRNRLKLQAIVDNARAYLKMRDQDKIEFSTF 209
Query: 292 LWGFVNHKPI-------NTQYRSSQKIPVKTSKSEAISKDMVKKGFRFVGPTVIHSFMQA 344
+W FVN+K +T + S+ + + S+A+S + KKGF+F+G T +++FMQ+
Sbjct: 210 IWSFVNNKSSIGQRVTGDTSVQGSRPL-TRNEVSDAMSVALKKKGFKFIGTTTLYAFMQS 268
Query: 345 AGLTNDHLITC 355
G+ NDH C
Sbjct: 269 VGIINDHCKDC 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 375 360 0.00082 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 617 (66 KB)
Total size of DFA: 229 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.42u 0.13s 29.55t Elapsed: 00:00:02
Total cpu time: 29.42u 0.13s 29.55t Elapsed: 00:00:02
Start: Sat May 11 00:11:05 2013 End: Sat May 11 00:11:07 2013