Query 017245
Match_columns 375
No_of_seqs 221 out of 1578
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 11:19:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3daa_A D-amino acid aminotrans 100.0 1E-61 3.5E-66 464.7 31.7 270 82-360 3-276 (277)
2 3u0g_A Putative branched-chain 100.0 2.4E-61 8.1E-66 472.1 31.5 276 82-365 31-318 (328)
3 2eiy_A ILVE, branched-chain am 100.0 5.7E-60 1.9E-64 458.7 34.1 286 82-375 8-308 (308)
4 1iye_A Branched-chain amino ac 100.0 2E-59 7E-64 454.9 32.7 283 82-371 9-307 (309)
5 3lul_A 4-amino-4-deoxychorisma 100.0 8.1E-59 2.8E-63 443.5 32.5 262 82-362 6-269 (272)
6 4dqn_A Putative branched-chain 100.0 6.4E-59 2.2E-63 457.7 28.6 282 82-372 33-344 (345)
7 1i2k_A 4-amino-4-deoxychorisma 100.0 5.3E-58 1.8E-62 436.8 32.1 260 82-357 2-266 (269)
8 2xpf_A 4-amino-4-deoxychorisma 100.0 8.5E-58 2.9E-62 440.6 31.5 262 82-360 24-290 (292)
9 3sno_A Hypothetical aminotrans 100.0 7.5E-57 2.6E-61 438.0 26.9 260 82-359 17-313 (315)
10 3uzo_A Branched-chain-amino-ac 100.0 5.8E-57 2E-61 445.5 26.3 275 82-365 48-348 (358)
11 3dth_A Branched-chain amino ac 100.0 7.6E-56 2.6E-60 438.8 29.3 280 82-371 53-371 (372)
12 2a1h_A Branched chain aminotra 100.0 1.5E-55 5E-60 437.1 29.9 276 82-365 47-357 (365)
13 2coi_A Branched chain aminotra 100.0 1.1E-55 3.8E-60 440.4 27.7 281 82-371 67-385 (386)
14 3dtg_A Branched-chain amino ac 100.0 1.2E-54 4.3E-59 431.2 28.5 281 82-371 53-371 (372)
15 3csw_A BCAT, putative branched 100.0 1.8E-54 6.2E-59 416.0 27.0 259 82-364 17-278 (285)
16 2zgi_A Putative 4-amino-4-deox 100.0 9.3E-51 3.2E-55 382.2 20.7 229 82-340 2-233 (246)
17 3qqm_A MLR3007 protein; struct 100.0 1.1E-43 3.9E-48 329.1 25.4 204 104-334 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 7.2E-41 2.5E-45 303.9 21.6 189 104-329 2-194 (194)
19 2lqo_A Putative glutaredoxin R 30.0 22 0.00075 27.1 1.7 54 299-355 28-82 (92)
20 2h8b_A Insulin-like 3; insulin 26.4 7.2 0.00025 22.7 -1.2 15 278-292 10-24 (26)
21 2r48_A Phosphotransferase syst 24.0 88 0.003 24.6 4.3 82 271-357 7-96 (106)
22 2r4q_A Phosphotransferase syst 22.7 1.5E+02 0.005 23.4 5.4 82 271-357 7-96 (106)
23 2ww6_A Fibritin, T4 fibritin; 21.1 70 0.0024 18.9 2.3 22 252-273 1-22 (27)
No 1
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=1e-61 Score=464.67 Aligned_cols=270 Identities=24% Similarity=0.327 Sum_probs=245.0
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCC
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 161 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~ 161 (375)
.|+||++++++++.|+++||++||||||||||++++|++|+|++|++||.+||++|+|+.|++.+++++.|.+++++++.
T Consensus 3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~~g~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li~~n~~ 82 (277)
T 3daa_A 3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNEL 82 (277)
T ss_dssp EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHHTC
T ss_pred EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEECCEEcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999999999999999999999999999889999999999999999998
Q ss_pred CCeeEEEEEecCCCCcccCCC-CCCCceEEEEEEeCCCCc--CCCCeEEEEeeeecCCCCCCCCcccCChHHHHHHHHHH
Q 017245 162 KKGTLRFWLTAGPGDFLLSPA-GCPTSAFYAVVIDDDFSQ--CKEGVKVITSSIPMKPRLFATVKNVNYLPNVLAKMEAE 238 (375)
Q Consensus 162 ~~g~iR~~vs~G~g~~~~~p~-~~~~~~~~~~~~~~p~~~--~~~Gv~l~~s~~~~~~~~~~~iKt~nyl~~vla~~eA~ 238 (375)
.+++||+++++|.+..++..+ .+..+.+++.+.+.+.+. ..+|+++.+++.. .+.++++|++||++|++++++|+
T Consensus 83 ~~~~lri~vtrG~~~r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~~--r~~~~~~Kt~nyl~~~la~~eA~ 160 (277)
T 3daa_A 83 NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDI--RWLRCDIKSLNLLGAVLAKQEAH 160 (277)
T ss_dssp CSEEEEEEEESCBCSCCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEECC--CCSCTTSCBSCCHHHHHHHHHHH
T ss_pred CcEEEEEEEEecCCCcCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecCc--cccCCCcchhhhHHHHHHHHHHH
Confidence 999999999999776554433 345678888877665322 3579999887543 34578999999999999999999
Q ss_pred hcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhcc
Q 017245 239 DKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGA 317 (375)
Q Consensus 239 ~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~a 317 (375)
++|+||+||+| +|+|+|++++|+| +++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||.+|
T Consensus 161 ~~g~~e~l~l~-~g~v~E~~~sNif-~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~---g~--~v~e~~i~~~el~~a 233 (277)
T 3daa_A 161 EKGCYEAILHR-NNTVTEGSSSNVF-GIKDGILYTHPANNMILKGITRDVVIACANEI---NM--PVKEIPFTTHEALKM 233 (277)
T ss_dssp HTTCSEEEEEE-TTEEEEETTBEEE-EEETTEEEECCSSTTSCCCHHHHHHHHHHHHT---TC--CEECCCCBHHHHHTC
T ss_pred HCCCCEEEEEc-CCEEEEcCceEEE-EEECCEEECCCCcCCCCccHHHHHHHHHHHHc---CC--eEEEEeCCHHHHHhc
Confidence 99999999997 8999999999995 5689999999996 799999999999999998 87 999999999999999
Q ss_pred ceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHh
Q 017245 318 AEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDM 360 (375)
Q Consensus 318 dEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i 360 (375)
||+|+|||++||+||.+||++.+++|++||++++|+++|.+.|
T Consensus 234 devf~~ns~~~i~pV~~id~~~~~~g~~g~~t~~L~~~~~~~i 276 (277)
T 3daa_A 234 DELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETKI 276 (277)
T ss_dssp SEEEEEETTTEEEEEEEETTEESTTSSCCHHHHHHHHHHHTTC
T ss_pred CeeeeecChhhEEEEEEECCEECCCCCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998543
No 2
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.4e-61 Score=472.13 Aligned_cols=276 Identities=26% Similarity=0.359 Sum_probs=250.7
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeC---C--eecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILN---G--YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~---G--~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++.+++.|++.||+|||||||||||++++ | ++|+|++|++||.+||++|+|+.|++.+++++++.+++
T Consensus 31 ~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~lv 110 (328)
T 3u0g_A 31 IWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDVV 110 (328)
T ss_dssp EEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence 599999999999999999999999999999999998 9 99999999999999999999998899999999999999
Q ss_pred HhcCCCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-Cc---CCCCeEEEEeeeecCCC--CCCCCc-ccCChH
Q 017245 157 AASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ---CKEGVKVITSSIPMKPR--LFATVK-NVNYLP 229 (375)
Q Consensus 157 ~~~~~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~---~~~Gv~l~~s~~~~~~~--~~~~iK-t~nyl~ 229 (375)
++++..+++||+++++|.+.+++.|..+ .+.+++.+.+.+. .+ ..+|+++.++++.|..+ .++++| ++||++
T Consensus 111 ~~n~~~~~~iR~~vtrg~~~~g~~p~~~-~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~R~~~~~~~~~~K~t~nyl~ 189 (328)
T 3u0g_A 111 RENKLESCYLRPIIWIGSEKLGVSAKGN-TIHVAIAAWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVN 189 (328)
T ss_dssp HHTTCSSEEEEEEEEECSSCCSTTCCCC-CEEEEEEEEECC----HHHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHH
T ss_pred HhcCCCCeEEEEEEEecCCCCCcCCCCC-CcEEEEEEEEcCCCCChhhhcCCEEEEEeeeeecCCCCcccchhhhhhhHH
Confidence 9999899999999999988888776543 3666666665432 21 24799999988766532 378999 899999
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEEc
Q 017245 230 NVLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANL 309 (375)
Q Consensus 230 ~vla~~eA~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~~iL~GiTR~~vlela~~l~~~G~~~~V~er~i 309 (375)
|++++++|+++|+||+||+|++|+|+|++++||| +++||+|+||+++++|+||||+.++++|+++ |+ +|+|+.+
T Consensus 190 ~vla~~eA~~~G~~e~l~ld~~g~v~E~~~sNif-~v~~g~l~TP~~~~iL~GitR~~vl~~a~~~---g~--~v~e~~i 263 (328)
T 3u0g_A 190 SILANQEATADGYDEALLLDVDGYVSEGSGENFF-LVNRGKLYTPDLASCLDGITRDTVITLAKEA---GI--EVIEKRI 263 (328)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTSCEEEESSSEEE-EEETTEEEECCSSSSCCCHHHHHHHHHHHHT---TC--CEEECCC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCcEEEcCceeEE-EEECCEEEeCCccccchHHHHHHHHHHHHHc---CC--eEEEEeC
Confidence 9999999999999999999999999999999995 5689999999996699999999999999998 97 9999999
Q ss_pred CHHHHhccceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHhhcCCC
Q 017245 310 TVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE 365 (375)
Q Consensus 310 ~~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i~~g~~ 365 (375)
+++||.+|||+|+|||+++|+||++||++.+++|++||++++|+++|. +++.|..
T Consensus 264 ~~~eL~~adevf~tns~~~v~PV~~Id~~~~~~g~~g~vt~~L~~~~~-~~~~g~~ 318 (328)
T 3u0g_A 264 TRDEVYTADEAFFTGTAAEVTPIRELDNRTIGGGARGPITEKLQSAFF-DVVNGKS 318 (328)
T ss_dssp CHHHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-HHHTTCC
T ss_pred CHHHHhhCCEEEEEcchhhEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHcCCC
Confidence 999999999999999999999999999999999999999999999998 7888865
No 3
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=5.7e-60 Score=458.73 Aligned_cols=286 Identities=24% Similarity=0.358 Sum_probs=252.1
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCC----eecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNG----YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTA 157 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G----~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~ 157 (375)
.|+||.+++.+++.|++.||++|||||+||||++++| ++|+|++|++||.+||+.|+++.|++.+++++.+.++++
T Consensus 8 ~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 87 (308)
T 2eiy_A 8 IWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVVR 87 (308)
T ss_dssp EEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSCEEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcccccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999 999999999999999999999888999999999999999
Q ss_pred hcCCCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-C-c--CCCCeEEEEeeeecCC--CCCCCCcccC-ChHH
Q 017245 158 ASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-S-Q--CKEGVKVITSSIPMKP--RLFATVKNVN-YLPN 230 (375)
Q Consensus 158 ~~~~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~-~--~~~Gv~l~~s~~~~~~--~~~~~iKt~n-yl~~ 230 (375)
+++..+++||+++++|.+.+++.|.....+.+++.+.+.+. . . ..+|+++.++++.|.. +.++++|++| |+.+
T Consensus 88 ~~~~~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~Kt~~ny~~~ 167 (308)
T 2eiy_A 88 RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVNS 167 (308)
T ss_dssp HTTCSSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECSSCBCCTTTSCTTSCBGGGHHHH
T ss_pred hCCCCcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEecceecCCCCcCcceehhhhHHHH
Confidence 98878899999999997777776542235667766665442 1 1 2579999998876643 3468999887 9999
Q ss_pred HHHHHHHHhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEEcC
Q 017245 231 VLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANLT 310 (375)
Q Consensus 231 vla~~eA~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~ 310 (375)
++++++|+++|+||+||+|++|+|+|++++|| |+++||+|+||+++.+|+||||+.++++|+++ |+ +|+|+.++
T Consensus 168 ~la~~~A~~~G~de~l~ld~~G~V~Egs~sNi-f~v~~g~l~TP~~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i~ 241 (308)
T 2eiy_A 168 ALAKMEAVAAGADEALLLDEEGYVAEGSGENL-FFVRDGVIYALEHSVNLEGITRDSVIRIAKDL---GY--EVQVVRAT 241 (308)
T ss_dssp HHHHHHHHHTTCSEEEEEBTTSSEEEESSCEE-EEEETTEEEEECCTTSCCCHHHHHHHHHHHHT---TC--CEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEcCceEE-EEEECCEEEeCCcCCCCchHHHHHHHHHHHHC---CC--eEEEEeCC
Confidence 99999999999999999999999999999999 55689999999985699999999999999998 87 99999999
Q ss_pred HHHHhccceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHhhcCCC----CCcccccCCC
Q 017245 311 VDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE----TQRHCVSYDQ 375 (375)
Q Consensus 311 ~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i~~g~~----~~~~~v~y~~ 375 (375)
++||.+|||+|+|||++||+||.+||++.+++|++||++++|+++|. +++.|.. .|..|| |+|
T Consensus 242 ~~dL~~adevfltns~~gv~pV~~id~~~~~~g~~g~~~~~l~~~~~-~~~~~~~~~~~~w~~~v-~~~ 308 (308)
T 2eiy_A 242 RDQLYMADEVFMTGTAAEVTPVSMIDWRPIGKGTAGPVALRLREVYL-EAVTGRRPEYEGWLTYV-NGQ 308 (308)
T ss_dssp HHHHHTCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-HHHTTCCGGGGGGEEEC-C--
T ss_pred HHHHhhCCEEEEccCcceEEEEEEEcCEECCCCCCCHHHHHHHHHHH-HHHcCCCCCccCCCeeC-CCC
Confidence 99999999999999999999999999999999999999999999998 6667754 467776 443
No 4
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=2e-59 Score=454.92 Aligned_cols=283 Identities=21% Similarity=0.302 Sum_probs=252.0
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEe---CC-eecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NG-YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTA 157 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~---~G-~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~ 157 (375)
.|+||.+++.+++.|++.||++|||||+||||+++ +| ++|+|++|++||.+||+.|+++.|++.+++++.+.++++
T Consensus 9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 88 (309)
T 1iye_A 9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIR 88 (309)
T ss_dssp EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSEEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHH
T ss_pred EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCcEEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999 99 999999999999999999999888999999999999999
Q ss_pred hcCCCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-CcC---CCCeEEEEeeeecCCC--CCCCCcc-cCChHH
Q 017245 158 ASQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQC---KEGVKVITSSIPMKPR--LFATVKN-VNYLPN 230 (375)
Q Consensus 158 ~~~~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~~---~~Gv~l~~s~~~~~~~--~~~~iKt-~nyl~~ 230 (375)
+++..+++||+++++|.+.+++.|.....+.+++.+.+.+. .+. .+|+++.++++.+..+ .++++|+ +||+++
T Consensus 89 ~~~~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~ny~~~ 168 (309)
T 1iye_A 89 KNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSS 168 (309)
T ss_dssp HTTCSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHH
T ss_pred hcCCCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEeeeeccCCCCCCccccchhhhHHH
Confidence 98888899999999998777776553335667666655432 121 3699999987666432 3579996 699999
Q ss_pred HHHHHHHHhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEc
Q 017245 231 VLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANL 309 (375)
Q Consensus 231 vla~~eA~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i 309 (375)
++++++|+++|+||+||+|++|+|+|++++|| |+++||+|+||+++ ++|+||||+.|+++|+++ |+ +|+|+.+
T Consensus 169 ~la~~~A~~~G~de~l~ld~~G~V~Egs~sNi-f~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i 242 (309)
T 1iye_A 169 LLVGSEARRHGYQEGIALDVNGYISEGAGENL-FEVKDGVLFTPPFTSSALPGITRDAIIKLAKEL---GI--EVREQVL 242 (309)
T ss_dssp HHHHHHHHHTTCSEEEEECTTSBEEEETTBEE-EEEETTEEEECCGGGTCCCCHHHHHHHHHHHHT---TC--CEEECCC
T ss_pred HHHHHHHHHcCCCEEEEECCCCcEEEcCceEE-EEEECCEEECCCCCCCCCCCHHHHHHHHHHHHc---CC--eEEEEeC
Confidence 99999999999999999999999999999999 55699999999996 799999999999999998 87 9999999
Q ss_pred CHHHHhccceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHhhcCCC----CCcccc
Q 017245 310 TVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGPE----TQRHCV 371 (375)
Q Consensus 310 ~~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i~~g~~----~~~~~v 371 (375)
+++||.+|||+|+|||++||+||.+||++.+++|++||++++|+++|. +++.|.. .|..+|
T Consensus 243 ~~~eL~~adevfltns~~gv~PV~~id~~~~~~g~~g~~~~~l~~~~~-~~~~g~~~~~~~w~~~v 307 (309)
T 1iye_A 243 SRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFF-GLFTGETEDKWGWLDQV 307 (309)
T ss_dssp BTTHHHHCSEEEEEETTTEEEEEEEETTEECTTSSCCHHHHHHHHHHH-GGGTTSSCCCSCCEEEC
T ss_pred CHHHHhhCcEEEEccCCCEEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHcCCCCccCCCCeEC
Confidence 999999999999999999999999999999999999999999999998 6777754 466666
No 5
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=8.1e-59 Score=443.49 Aligned_cols=262 Identities=20% Similarity=0.204 Sum_probs=234.2
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCC
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 161 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~ 161 (375)
.|+|| ++++.|+++||++||||||||||++++|++|+|++|++||.+||+.|+|+.|++.+++.+.+.+++++++.
T Consensus 6 ~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 81 (272)
T 3lul_A 6 VIEDK----GDMTPSFGIDDRIFLGEGLFETIRVNSSKPSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKIQKDNL 81 (272)
T ss_dssp ECCCC----C--CCCCCTTBGGGGTCEEEEEEEEETTEESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHTTC
T ss_pred EEECC----ccccccCCccchhhcceEeEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 68899 77889999999999999999999999999999999999999999999999889999999999999999988
Q ss_pred CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCcCCCCeEEEEeeeecC-CCCCCCCcccCChHHHHHHHHHHhc
Q 017245 162 KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEAEDK 240 (375)
Q Consensus 162 ~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~~~~Gv~l~~s~~~~~-~~~~~~iKt~nyl~~vla~~eA~~~ 240 (375)
.+++||+++++|.+..++.++....+.+++. .|+++...++++.++++++. ++.++++|++||+++++++++|+++
T Consensus 82 ~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~---~p~~~~~~~v~l~~~~~~r~~~~~~~~~Kt~nyl~~~la~~~A~~~ 158 (272)
T 3lul_A 82 YHGGIKAILSGGPASRGLAERGQVSQLIFQT---FNYSIQKHPVRLISINWLRDKANPLYQLKSVNYLEAIIAQRQAIAV 158 (272)
T ss_dssp SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE---ECCCCCCSCEEEEEEEEEECTTCGGGGSCBSCCHHHHHHHHHHHHT
T ss_pred CCEEEEEEEEecCCccCcCCCCCCCcEEEEE---ECCCCccccEEEEEEeEEecCCCcccchhhhccHHHHHHHHHHHHc
Confidence 8999999999998877777655455666554 34433334689988888875 4567899999999999999999999
Q ss_pred CCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccce
Q 017245 241 GASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAE 319 (375)
Q Consensus 241 G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~adE 319 (375)
|+||+||+|++|+|+|++++||| +++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||.+|||
T Consensus 159 G~de~L~ld~~g~v~E~~~sNif-~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~---g~--~v~e~~i~~~el~~ade 232 (272)
T 3lul_A 159 GADDALFFNTENHVTETTCANLF-LIENNILYTPRVEDGILPGITRARLISHCQQH---KM--SVQEISLTKKRIEDADA 232 (272)
T ss_dssp TCSEEEEEETTSBEEEESSCEEE-EEETTEEEECCGGGTCCCCHHHHHHHHHHHHT---TC--CEEECCCBHHHHHTCSE
T ss_pred CCCEEEEECCCCeEEEcCCeEEE-EEECCEEECCCCccCcCcCHHHHHHHHHHHHc---CC--eEEEEECCHHHHhhCCE
Confidence 99999999999999999999995 5699999999985 899999999999999998 87 99999999999999999
Q ss_pred EEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHhhc
Q 017245 320 MMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVA 362 (375)
Q Consensus 320 vfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i~~ 362 (375)
+|+|||++||+||++|||+++++ +++|+++|.+..+.
T Consensus 233 vf~~ns~~~v~PV~~id~~~~~~------t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 233 VFLTNSLQGIRRVLSLDNIIFEV------NHPIIDKLIFLLNQ 269 (272)
T ss_dssp EEEEETTTEEEEEEEETTEECCC------CCHHHHHHHHHHHH
T ss_pred EEEEcCchhEEEEEEECCEEcch------HHHHHHHHHHHHhh
Confidence 99999999999999999999975 88999999865543
No 6
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=6.4e-59 Score=457.68 Aligned_cols=282 Identities=20% Similarity=0.180 Sum_probs=248.7
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCe-----ecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGY-----LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~-----i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++.+++.|++.||++|||||||||||+++|+ +|+|++|++||.+||++|+|+ +++.++|.++|.+++
T Consensus 33 ~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~Sa~~L~i~-~~~~~~l~~~i~~lv 111 (345)
T 4dqn_A 33 KWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQRTADRLLMP-QVPTDKFIDAAKQVV 111 (345)
T ss_dssp EECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred cEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999876 999999999999999999998 789999999999999
Q ss_pred HhcCC--------CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-Cc-CCCCeEEEEee-eecC-CCCCCCCcc
Q 017245 157 AASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ-CKEGVKVITSS-IPMK-PRLFATVKN 224 (375)
Q Consensus 157 ~~~~~--------~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~-~~~Gv~l~~s~-~~~~-~~~~~~iKt 224 (375)
++++. .+++||++++++.+.+++.|+. .+.+++.+.+.+. .. ..+|+++.+++ +.|. ++.++++|+
T Consensus 112 ~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~--~~~~~i~~~p~~~~~~~~~~gv~l~~~~~~~R~~~~~~~~~Kt 189 (345)
T 4dqn_A 112 RANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPAD--EYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAKV 189 (345)
T ss_dssp HHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCS--EEEEEEEEEEECCSCTTSCCCEEEEECTTCCSSCTTSSTTSCC
T ss_pred HhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCC--CeEEEEEEEECccccccCCCCEEEEEccceEecCCCccccccc
Confidence 99864 3569999999887777776653 5667766665432 11 25799999987 5554 456799998
Q ss_pred -cCChHHHHHHHHHHhcCCcEEEEEcC--CCcEeeeCCceEEEEEeCCEEEecCCCCccccHHHHHHHHHhhh-hhhCCC
Q 017245 225 -VNYLPNVLAKMEAEDKGASASIWIDE--DGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPK-LVEQGR 300 (375)
Q Consensus 225 -~nyl~~vla~~eA~~~G~deaL~ld~--~G~V~E~s~sNvffv~k~g~l~TP~~~~iL~GiTR~~vlela~~-l~~~G~ 300 (375)
+||++|++++++|+++|+||+||+|. +|+|+|++++||||+++||+|+||+.++||+||||+.||++|++ + |+
T Consensus 190 ~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~~~~iL~GitR~~vl~la~~~~---g~ 266 (345)
T 4dqn_A 190 GGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPLSPSILPSVTKYSLLYLAEHRF---GM 266 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECCCTTSCCCHHHHHHHHHHHHTT---CC
T ss_pred cccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCCCCCccHHHHHHHHHHHHHhcc---CC
Confidence 99999999999999999999999998 69999999999966558999999993379999999999999999 8 87
Q ss_pred cceEEEEEcCHHHHhccceEEEEcCccceEEEEEECCe----ecCCC-ChhHHHHHHHHHHHHHhhcCCC----CCcccc
Q 017245 301 LKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQ----PIGDG-NVGELTMALSDLLWEDMVAGPE----TQRHCV 371 (375)
Q Consensus 301 ~~~V~er~i~~~eL~~adEvfl~nS~~gv~PV~~id~~----~i~~g-~~gpvt~~L~~~~~~~i~~g~~----~~~~~v 371 (375)
+|+|+.++++||.+|||+|+|||+++|+||.+||++ .+++| ++||++++|+++|. +++.|.. .|..+|
T Consensus 267 --~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~-~i~~g~~~~~~~W~~~v 343 (345)
T 4dqn_A 267 --KAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDELT-GIQFGDVKAPEGWIYKV 343 (345)
T ss_dssp --EEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHH-HHHTTSSCCCTTCEEET
T ss_pred --eEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHHH-HHHcCCCCCCCCCceEC
Confidence 999999999999999999999999999999999998 89875 69999999999998 8999865 356666
Q ss_pred c
Q 017245 372 S 372 (375)
Q Consensus 372 ~ 372 (375)
.
T Consensus 344 ~ 344 (345)
T 4dqn_A 344 D 344 (345)
T ss_dssp T
T ss_pred C
Confidence 3
No 7
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=5.3e-58 Score=436.78 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=234.3
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCC
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 161 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~ 161 (375)
.|+||+ .++.|+++||++|||||+||||++++|++|+|++|++||.+||+.|+++.| +.+++++.|.++++.+
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~l~~~i~~~~~~~-- 74 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCD-FWPQLEQEMKTLAAEQ-- 74 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCC-CHHHHHHHHHHHHHHH--
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEECCEEecHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHHhC--
Confidence 588999 357799999999999999999999999999999999999999999999877 8999999999998865
Q ss_pred CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCc---CCCCeEEEEeeeecC-CCCCCCCcccCChHHHHHHHHH
Q 017245 162 KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEA 237 (375)
Q Consensus 162 ~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~---~~~Gv~l~~s~~~~~-~~~~~~iKt~nyl~~vla~~eA 237 (375)
.+++||+++++|.++.++.|+.+..+.+++.+.+.+... ..+|+++.+++.++. ++.++++|++||+.+++++++|
T Consensus 75 ~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~Kt~n~~~~~~a~~~A 154 (269)
T 1i2k_A 75 QNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHL 154 (269)
T ss_dssp CSEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCCHHHHHHHHHH
T ss_pred CCeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEeceecCCCCcccCcchhhhHHHHHHHHHH
Confidence 479999999999887777777666788887776554321 357999999876664 4467899999999999999999
Q ss_pred HhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhc
Q 017245 238 EDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKG 316 (375)
Q Consensus 238 ~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~ 316 (375)
+++|+||+||+|++|+|+|++++|| |+++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||.+
T Consensus 155 ~~~G~de~l~ld~~G~v~E~s~sNi-f~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~---g~--~v~e~~i~~~eL~~ 228 (269)
T 1i2k_A 155 EQTNADEALVLDSEGWVTECCAANL-FWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQS---SY--QLVEVQASLEESLQ 228 (269)
T ss_dssp TTSSCSEEEEEBTTSBEEECSSSEE-EEEETTEEEEECCSSSSBCCHHHHHHHHHHHHS---SS--EEEEECCBHHHHHT
T ss_pred HHCCCCEEEEECCCCcEEEcCceEE-EEEECCEEECCCCccCccCCHHHHHHHHHHHHc---CC--eEEEEECCHHHHhh
Confidence 9999999999999999999999999 55689999999996 799999999999999998 87 99999999999999
Q ss_pred cceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHH
Q 017245 317 AAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLW 357 (375)
Q Consensus 317 adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~ 357 (375)
|||+|+|||++||+||.+|||+.+++ ||++++|+++|.
T Consensus 229 adevfltns~~gv~pV~~id~~~~~~---g~~~~~l~~~~~ 266 (269)
T 1i2k_A 229 ADEMVICNALMPVMPVCACGDVSFSS---ATLYEYLAPLCE 266 (269)
T ss_dssp CSEEEEECSSSCEEEEEEETTEECCC---CHHHHHHHHHHH
T ss_pred CCEEEEcCChhheEEEEEECCEEecC---cHHHHHHHHHHh
Confidence 99999999999999999999999975 799999999986
No 8
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=8.5e-58 Score=440.57 Aligned_cols=262 Identities=25% Similarity=0.320 Sum_probs=236.4
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCC
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 161 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~ 161 (375)
.|+||.++ +.|+++||++|||||+||||++++|++++|++|++||.+||+.|+++.| .+++.+.+.++++..
T Consensus 24 ~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~--~~~l~~~i~~~v~~~-- 95 (292)
T 2xpf_A 24 DWVDGRPA----AELSVRDRGLAYGDGLFETLAVRAGTPRLLERHLARLEEGCRRLAIPLD--TAALRQELLAFCAAL-- 95 (292)
T ss_dssp EEETTEEC----SEEETTBHHHHHCCEEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHH--
T ss_pred EEECCEEE----EEEcccchhhhcCcEeEEEEEEECCEECCHHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHHhC--
Confidence 68999998 6799999999999999999999999999999999999999999999754 889999999998873
Q ss_pred CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCc---CCCCeEEEEeeeecC-CCCCCCCcccCChHHHHHHHHH
Q 017245 162 KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEA 237 (375)
Q Consensus 162 ~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~---~~~Gv~l~~s~~~~~-~~~~~~iKt~nyl~~vla~~eA 237 (375)
.+++||+++++|.+..++.|..+..+.+++.+.+.|... ..+|+++.+++.++. .+.++++|++||+.+++++++|
T Consensus 96 ~~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~la~~~A 175 (292)
T 2xpf_A 96 GDGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRTRLAEQPLLAGLKHLNRLEQVLARAEW 175 (292)
T ss_dssp CSEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCCCBCCCTTTTBCCBSCCHHHHHHHTTC
T ss_pred CCcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeeeeccCCCCCCCcchhhhHHHHHHHHHH
Confidence 578999999999887777776666778887776654322 257999999887654 4467899999999999999999
Q ss_pred HhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhc
Q 017245 238 EDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKG 316 (375)
Q Consensus 238 ~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~ 316 (375)
+++|+||+||+|++|+|+|++++|| |+++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|++++++||.+
T Consensus 176 ~~~G~de~L~ld~~G~V~Egs~sNi-f~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~---G~--~v~E~~i~~~eL~~ 249 (292)
T 2xpf_A 176 SDAGHAEGLMLDVHERVVEGVFSNL-LLVLDGTLVAPDLRRCGVAGVMRAELLERAEGI---GV--PLAIRDVSMAELAT 249 (292)
T ss_dssp CCTTCSEEEEEBTTCCEEEESSSEE-EEEETTEEEEECCSSSSBCCHHHHHHHHHHHHT---TC--CEEEECBCHHHHHT
T ss_pred HHcCCCEEEEECCCCCEEEcCCeEE-EEEECCEEEeCCCCCccCCCHHHHHHHHHHHHc---CC--eEEEEeCCHHHHHh
Confidence 9999999999999999999999999 55689999999986 799999999999999998 97 99999999999999
Q ss_pred cceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHh
Q 017245 317 AAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDM 360 (375)
Q Consensus 317 adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i 360 (375)
|||+|+|||++||+||.+||++.++ +||++++|+++|.+++
T Consensus 250 adevfltns~~gv~PV~~id~~~~~---~g~~t~~l~~~~~~~~ 290 (292)
T 2xpf_A 250 ADEVFLCNSQFGIWPVRALDEHVWP---VGELTRKLQDQLRDDL 290 (292)
T ss_dssp CSEEEEEETTTEEEEEEEETTEECC---CCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCcccEEEEEEECCEEeC---CCHHHHHHHHHHHHHh
Confidence 9999999999999999999999996 5799999999999876
No 9
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.5e-57 Score=438.02 Aligned_cols=260 Identities=23% Similarity=0.292 Sum_probs=202.0
Q ss_pred ceeC---CEe--cCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFG---GII--LDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~---g~~--~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+| |++ ++++++.|+++||||||||||||||++++|++|+|++|++||.+||+.|+|+.| +.+++++.+.+++
T Consensus 17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~~G~~~~l~~Hl~RL~~Sa~~L~i~~p-~~~~l~~~i~~~v 95 (315)
T 3sno_A 17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIRDGHACNVRRHGERFKASAALLGLPEP-ILEDWEKATQMGI 95 (315)
T ss_dssp EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEETTEETTHHHHHHHHHHHHHHHTCCCC-CHHHHHHHHHHHH
T ss_pred EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCCc-CHHHHHHHHHHHH
Confidence 5788 999 999999999999999999999999999999999999999999999999999877 8999999999999
Q ss_pred Hh----cCCCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCc---CCCCeEEEEeeeec---------------
Q 017245 157 AA----SQCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ---CKEGVKVITSSIPM--------------- 214 (375)
Q Consensus 157 ~~----~~~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~---~~~Gv~l~~s~~~~--------------- 214 (375)
++ |+..+++||+++++|.+..+ .|.+++.+.+.+... ..+|+++.+++.+.
T Consensus 96 ~~~~~~n~~~~~~iRl~vtrG~~~~g-------~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~~r~ 168 (315)
T 3sno_A 96 ESWYSHPNAGEASCTWTLSRGRSSTG-------LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIGKATRG 168 (315)
T ss_dssp HHHHTC--CCCEEEEEEEECCBTTTC-------CCEEEEEEEECCHHHHHHHHHCEEEEEEEC-----------------
T ss_pred HhhcccCCCCCEEEEEEEEeCCCCCC-------CCEEEEEEEECCCcchhhhcCCEEEEEeccccccccccccccccccc
Confidence 87 56788999999999876543 256777666554322 25799998876321
Q ss_pred ---------CCCCCCCCcccCChHHHHHHHHHHhcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHH
Q 017245 215 ---------KPRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCT 284 (375)
Q Consensus 215 ---------~~~~~~~iKt~nyl~~vla~~eA~~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiT 284 (375)
.++.++++|++||++|++++++|+++|+||+||+|++| |+|++++|+| +++||+|+||+++ ++|+|||
T Consensus 169 ~~s~~~~~~~p~~l~~~Kt~nyl~~vla~~~A~~~G~de~l~l~~~G-v~E~s~sN~f-~~~~g~l~TPp~~~~iL~Git 246 (315)
T 3sno_A 169 ELSKVERTPAPWLTVGAKTLAYAANMAALRYAKSNGFDDVIFTDGDR-VLEGATSTVV-SFKGDKIRTPSPGGDILPGTT 246 (315)
T ss_dssp ------------------------------------CEEEEEEETTE-EEEESSSEEE-EEETTEEEEECCC------HH
T ss_pred cccccccccCcccccCcchhccHHHHHHHHHHHHcCCCEEEEEeCCC-cEEcCCeeEE-EEECCEEEcCCCCCCcChhHH
Confidence 12346899999999999999999999999999999999 9999999994 5689999999986 7999999
Q ss_pred HHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccceEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHH
Q 017245 285 AKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWED 359 (375)
Q Consensus 285 R~~vlela~~l~~~G~~~~V~er~i~~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~ 359 (375)
|+.++++|+++ |+ +|+|+.++++||.+|||+|+|||++||+||++|||+.++. +|++++|+++|++.
T Consensus 247 R~~ll~~a~~~---g~--~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~id~~~~~~---~~~~~~l~~~~~~~ 313 (315)
T 3sno_A 247 QAALFAHATEK---GW--RCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRLDGHKLRK---PDNEKEIKALITKA 313 (315)
T ss_dssp HHHHHHHHHHT---TC--EEEEECCBHHHHHHSSEEEEEETTTEEEEEEEESSSCCCC---CTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---CC--EEEEEECCHHHHHhCCeeEEEcCcccEEEEEEECCEECCC---ChHHHHHHHHHHHh
Confidence 99999999998 97 9999999999999999999999999999999999999974 78999999999853
No 10
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=5.8e-57 Score=445.46 Aligned_cols=275 Identities=20% Similarity=0.197 Sum_probs=240.5
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEe---CCe--ecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~---~G~--i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++.+++.|++.||++|||||||||||++ +|+ +|+|++|++||.+||++|+|+ +++.++|.++|.+++
T Consensus 48 ~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip-~~~~e~l~~~i~~lv 126 (358)
T 3uzo_A 48 EWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMP-ELSDEQFIDACLQVV 126 (358)
T ss_dssp EECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred cEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999 565 899999999999999999997 889999999999999
Q ss_pred HhcCC--------CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-Cc-CCCCeEEEEeeeecCC-CCCCCCc-c
Q 017245 157 AASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ-CKEGVKVITSSIPMKP-RLFATVK-N 224 (375)
Q Consensus 157 ~~~~~--------~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~-~~~Gv~l~~s~~~~~~-~~~~~iK-t 224 (375)
++++. .+++||++++++.+.+++.|.. .+.+++.+.|.+. .. -.+|+++.++++.|.. ..++++| +
T Consensus 127 ~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~--~~~~~i~~~P~~~~~~~g~~~v~l~~~~~~R~~p~~~~~~K~~ 204 (358)
T 3uzo_A 127 RANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAP--EFIFSVFCVPVGPYFKGGLTPTNFITSDYDRAAPHGTGAAKVG 204 (358)
T ss_dssp HHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCS--EEEEEEEEEEECCSSCSSSCCEEEECCSCCSSCTTSSTTSCBH
T ss_pred HHcCCcCCCCCCCceEEEEEEEEecCCccccCCCC--CeEEEEEEecChhhhhcCCccEEEEEEeeeccCCCccccccch
Confidence 99864 3579999999988777777653 4556666554331 11 1356888888776654 4568999 6
Q ss_pred cCChHHHHHHHHHHhcCCcEEEEEcCC--CcEeeeCCceEEEEEeCCE-EEecCCCCccccHHHHHHHHHhhh-hhhCCC
Q 017245 225 VNYLPNVLAKMEAEDKGASASIWIDED--GYVAEGPNVNVAFITHDKE-LVLPFFDKILSGCTAKRLLELAPK-LVEQGR 300 (375)
Q Consensus 225 ~nyl~~vla~~eA~~~G~deaL~ld~~--G~V~E~s~sNvffv~k~g~-l~TP~~~~iL~GiTR~~vlela~~-l~~~G~ 300 (375)
+||+++++++++|+++|+||+||+|.+ |+|+|++++|+||+.+||+ |+||+.++||+||||++||++|++ + |+
T Consensus 205 ~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~TP~~~~iL~GItR~~vl~la~~~~---g~ 281 (358)
T 3uzo_A 205 GNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQSPSILPSITKYSLLWLAEHRL---GL 281 (358)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEEEECCTTSCCCHHHHHHHHHHHHTT---CC
T ss_pred hhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEEECCcCCcccCHHHHHHHHHHHhhc---CC
Confidence 999999999999999999999999985 9999999999966656787 999994379999999999999999 8 97
Q ss_pred cceEEEEEcCHHHHhccceEEEEcCccceEEEEEECCe----ecCC-CChhHHHHHHHHHHHHHhhcCCC
Q 017245 301 LKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVWDEQ----PIGD-GNVGELTMALSDLLWEDMVAGPE 365 (375)
Q Consensus 301 ~~~V~er~i~~~eL~~adEvfl~nS~~gv~PV~~id~~----~i~~-g~~gpvt~~L~~~~~~~i~~g~~ 365 (375)
+|+|++++++||.+|||+|+|||+.+|+||.+||++ .+++ |++||++++|+++|. +||.|..
T Consensus 282 --~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~-~iq~g~~ 348 (358)
T 3uzo_A 282 --EVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELV-GIQYGDK 348 (358)
T ss_dssp --EEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHH-HHHTTSS
T ss_pred --eEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHHHHHHHHHH-HHHcCCC
Confidence 999999999999999999999999999999999987 6765 469999999999998 8999965
No 11
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=7.6e-56 Score=438.85 Aligned_cols=280 Identities=23% Similarity=0.314 Sum_probs=243.7
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEe---CCe--ecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~---~G~--i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++.+++.|++.||++|||||||||||++ +|+ +|+|++|++||.+||++|+|+ +++.++|.++|.+++
T Consensus 53 ~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp-~~~~e~l~~~i~~lv 131 (372)
T 3dth_A 53 GWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-ELPEEVFIESLRQLI 131 (372)
T ss_dssp EEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred eEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 49999999999999999999999999999999998 776 799999999999999999997 789999999999999
Q ss_pred HhcCC--------CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-Cc-CCCCeEEEEee-eecC-CCCCCCCcc
Q 017245 157 AASQC--------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ-CKEGVKVITSS-IPMK-PRLFATVKN 224 (375)
Q Consensus 157 ~~~~~--------~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~-~~~Gv~l~~s~-~~~~-~~~~~~iKt 224 (375)
++++. .+.|||+.++++.+.+++.|+. .+.+++++.|.+. .. ..+|+++.+++ +.|. +..++.+|+
T Consensus 132 ~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~--~~~~~i~~~p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~ 209 (372)
T 3dth_A 132 AVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSN--EYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKF 209 (372)
T ss_dssp HHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCS--EEEEEEEEEEESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCC
T ss_pred HhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCC--CeEEEEEEeeCchhhccCCccEEEEEccceeccCCCcccchhh
Confidence 98852 3569999999887777777653 4566666655332 11 13578887764 5554 446789997
Q ss_pred -cCChHHHHHHHHHHhcCCcEEEEEcC--CCcEeeeCCceEEEEEeCC----EEEecCCC-CccccHHHHHHHHHhhhhh
Q 017245 225 -VNYLPNVLAKMEAEDKGASASIWIDE--DGYVAEGPNVNVAFITHDK----ELVLPFFD-KILSGCTAKRLLELAPKLV 296 (375)
Q Consensus 225 -~nyl~~vla~~eA~~~G~deaL~ld~--~G~V~E~s~sNvffv~k~g----~l~TP~~~-~iL~GiTR~~vlela~~l~ 296 (375)
+||+++++++++|+++|+||+||+|. +|+|+|++++|+||+ +++ +|+||+++ +||+||||++||++|+++
T Consensus 210 ~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v-~~~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~- 287 (372)
T 3dth_A 210 GGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFV-FGSGGSARLVTPELSGSLLPGITRDSLLQLATDA- 287 (372)
T ss_dssp HHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEE-ESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHH-
T ss_pred HhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEE-ECCCCceEEEECCCCCCcCHHHHHHHHHHHHHHC-
Confidence 79999999999999999999999998 999999999999554 676 99999986 799999999999999998
Q ss_pred hCCCcceEEEEEcCHHHHhcc------ceEEEEcCccceEEEEEECCe----ecCCCChhHHHHHHHHHHHHHhhcCCC-
Q 017245 297 EQGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWDEQ----PIGDGNVGELTMALSDLLWEDMVAGPE- 365 (375)
Q Consensus 297 ~~G~~~~V~er~i~~~eL~~a------dEvfl~nS~~gv~PV~~id~~----~i~~g~~gpvt~~L~~~~~~~i~~g~~- 365 (375)
|+ +|+||+|+++||.+| +|+|+|||+.+|+||.+||++ .+++|++||++++|+++|. +||.|..
T Consensus 288 --G~--~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gpvt~~L~~~l~-~iq~g~~~ 362 (372)
T 3dth_A 288 --GF--AVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLT-GIQRGTFA 362 (372)
T ss_dssp --TC--EEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHH-HHHHTSSC
T ss_pred --CC--eEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceEECCCCCcCHHHHHHHHHHH-HHHcCCCC
Confidence 97 999999999999998 999999999999999999876 7899999999999999998 8999965
Q ss_pred ---CCcccc
Q 017245 366 ---TQRHCV 371 (375)
Q Consensus 366 ---~~~~~v 371 (375)
.|..+|
T Consensus 363 d~~~W~~~v 371 (372)
T 3dth_A 363 DTHGWMARL 371 (372)
T ss_dssp CTTCCEEEC
T ss_pred CCCCCeEEC
Confidence 356555
No 12
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1.5e-55 Score=437.10 Aligned_cols=276 Identities=18% Similarity=0.185 Sum_probs=239.8
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeC---C--eecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILN---G--YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~---G--~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++.+++.|++.||++||||||||||++++ | ++|+|++|++||.+||++|+|+ +++.+++.+.|.+++
T Consensus 47 ~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~-~~~~~~l~~~i~~lv 125 (365)
T 2a1h_A 47 GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP-SFDKLELLECIRRLI 125 (365)
T ss_dssp EECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred eEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Confidence 589999999999999999999999999999999985 4 7899999999999999999998 789999999999999
Q ss_pred HhcCC-------CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCc--C-CCCeEEEEeee-ec-CCCCCCCCcc
Q 017245 157 AASQC-------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQ--C-KEGVKVITSSI-PM-KPRLFATVKN 224 (375)
Q Consensus 157 ~~~~~-------~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~--~-~~Gv~l~~s~~-~~-~~~~~~~iKt 224 (375)
+.++. .+.+||+++++|.+.+++.|+. .+.+++.+.+.+... . .+|+++.+++. .| .++.++++|+
T Consensus 126 ~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~--~~~~~i~~~p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt 203 (365)
T 2a1h_A 126 EVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPR--RALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKL 203 (365)
T ss_dssp HHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCS--EEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCB
T ss_pred HhccccCCCCCCceEEEEEEEEecCCccCCCCCC--CcEEEEEEEECccccccccccceEEEEccccccCCCCccchhch
Confidence 98752 2469999999987777776653 567777776544211 1 46799888763 44 3556789996
Q ss_pred -cCChHHHHHHHHHHhcCCcEEEEE-cCCCcEeeeCCceEEEEEe--CCE--EEecCCC-CccccHHHHHHHHHhhhhhh
Q 017245 225 -VNYLPNVLAKMEAEDKGASASIWI-DEDGYVAEGPNVNVAFITH--DKE--LVLPFFD-KILSGCTAKRLLELAPKLVE 297 (375)
Q Consensus 225 -~nyl~~vla~~eA~~~G~deaL~l-d~~G~V~E~s~sNvffv~k--~g~--l~TP~~~-~iL~GiTR~~vlela~~l~~ 297 (375)
+||+++++++++|+++|+||+||+ |++|+|+|++++||||+.+ ||+ |+||+++ +||+||||+.||++|+++
T Consensus 204 ~~ny~~~~la~~eA~~~G~de~L~l~d~~G~V~E~~~sNif~v~~~~dg~~~l~TP~l~~~iL~GITR~~vl~la~~~-- 281 (365)
T 2a1h_A 204 GGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTW-- 281 (365)
T ss_dssp GGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHH--
T ss_pred hhccHHHHHHHHHHHHcCCCeEEEEECCCCeEEEcCceEEEEEEecCCCcEEEEeCCCCCCccccHHHHHHHHHHHhc--
Confidence 999999999999999999999999 8999999999999966644 665 9999996 799999999999999983
Q ss_pred CCCcceEEEEEcCHHHHhcc------ceEEEEcCccceEEEEEEC--CeecC---CCChhHHHHHHHHHHHHHhhcCCC
Q 017245 298 QGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWD--EQPIG---DGNVGELTMALSDLLWEDMVAGPE 365 (375)
Q Consensus 298 ~G~~~~V~er~i~~~eL~~a------dEvfl~nS~~gv~PV~~id--~~~i~---~g~~gpvt~~L~~~~~~~i~~g~~ 365 (375)
.|+ +|+|+.++++||.+| ||+|+|||+++|+||.+|| |+.+. +|++||++++|+++|. +++.|..
T Consensus 282 ~G~--~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~g~~g~vt~~L~~~~~-~~~~g~~ 357 (365)
T 2a1h_A 282 GEF--RVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELK-EIQYGIR 357 (365)
T ss_dssp TSS--EEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHHHHHHHHHH-HHHTTSS
T ss_pred CCC--ceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCCCCcCHHHHHHHHHHH-HHHcCCC
Confidence 187 999999999999999 9999999999999999999 88653 5678999999999997 8999964
No 13
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=1.1e-55 Score=440.42 Aligned_cols=281 Identities=21% Similarity=0.204 Sum_probs=243.5
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCC-----eecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNG-----YLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G-----~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
.|+||++++...+.|++.||++|||||||||||+++| ++|+|++|++||.+||++|+|+ +++.+++.+.|.+++
T Consensus 67 ~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p-~~~~e~~~~~i~~lv 145 (386)
T 2coi_A 67 GWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLP-VFDKEELLECIQQLV 145 (386)
T ss_dssp EECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred EEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999988 8999999999999999999998 789999999999999
Q ss_pred HhcCC-------CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCC-Cc-C-CCCeEEEEeeee-c-CCCCCCCCcc
Q 017245 157 AASQC-------KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDF-SQ-C-KEGVKVITSSIP-M-KPRLFATVKN 224 (375)
Q Consensus 157 ~~~~~-------~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~-~~-~-~~Gv~l~~s~~~-~-~~~~~~~iKt 224 (375)
++++. ...+||++++++.+.+++.|+. .+.+++++.+.+. .. . .+|+++.+++.. + .+..++++|+
T Consensus 146 ~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~--~~~~~i~~~p~~~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~ 223 (386)
T 2coi_A 146 KLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPT--KALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKM 223 (386)
T ss_dssp HHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCS--EEEEEEEEEEECCCC-----CCEEEEECTTCCSCCTTSSTTSCC
T ss_pred HhccccCCCCCCccEEEEEEEEecCCccccCCCC--CcEEEEEEEECcccccccccccEEEEEcccccccCCCccccccc
Confidence 98752 3469999999776667777653 5677777765432 11 1 468999888642 3 3445678996
Q ss_pred -cCChHHHHHHHHHHhcCCcEEEEEc-CCCcEeeeCCceEEEEE--eCC--EEEecCCC-CccccHHHHHHHHHhhh-hh
Q 017245 225 -VNYLPNVLAKMEAEDKGASASIWID-EDGYVAEGPNVNVAFIT--HDK--ELVLPFFD-KILSGCTAKRLLELAPK-LV 296 (375)
Q Consensus 225 -~nyl~~vla~~eA~~~G~deaL~ld-~~G~V~E~s~sNvffv~--k~g--~l~TP~~~-~iL~GiTR~~vlela~~-l~ 296 (375)
+||+++++++++|+++|+||+||+| .+|+|+|++++||||+. +|| +|+||+++ +||+||||++||++|++ +
T Consensus 224 ~~Ny~~~~la~~eA~~~G~de~L~ld~~~g~V~E~~~sNiF~v~~~~~g~~~l~TP~l~~~iL~GITR~~vl~la~~~~- 302 (386)
T 2coi_A 224 GGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWG- 302 (386)
T ss_dssp THHHHTTHHHHHHHHTTTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHC-
T ss_pred ccChHHHHHHHHHHHHcCCCEEEEEECCCCEEEEeCCceEEEEEEcCCCCEEEEECCCCCCccHHHHHHHHHHHHHhcc-
Confidence 8999999999999999999999999 79999999999996664 488 99999996 79999999999999998 5
Q ss_pred hCCCcceEEEEEcCHHHHhcc------ceEEEEcCccceEEEEEEC--CeecC---CCChhHHHHHHHHHHHHHhhcCCC
Q 017245 297 EQGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWD--EQPIG---DGNVGELTMALSDLLWEDMVAGPE 365 (375)
Q Consensus 297 ~~G~~~~V~er~i~~~eL~~a------dEvfl~nS~~gv~PV~~id--~~~i~---~g~~gpvt~~L~~~~~~~i~~g~~ 365 (375)
|+ +|+||.|+++||.+| +|+|+|||+++|+||.+|+ |+.++ +|++||++++|+++|. +||.|..
T Consensus 303 --G~--~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~g~~g~vt~~L~~~l~-~iq~g~~ 377 (386)
T 2coi_A 303 --EF--KVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLT-DIQYGRE 377 (386)
T ss_dssp --SS--EEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGGGGTTHHHHHHHHHHH-HHHTTSS
T ss_pred --CC--cEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCCCCcCHHHHHHHHHHH-HHhCCCC
Confidence 87 999999999999999 9999999999999999999 98887 5678999999999998 8999964
Q ss_pred --CCcccc
Q 017245 366 --TQRHCV 371 (375)
Q Consensus 366 --~~~~~v 371 (375)
.|..+|
T Consensus 378 ~~~W~~~v 385 (386)
T 2coi_A 378 ERDWTIVL 385 (386)
T ss_dssp CCTTEEEC
T ss_pred CCCCeEeC
Confidence 355555
No 14
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.2e-54 Score=431.25 Aligned_cols=281 Identities=23% Similarity=0.323 Sum_probs=235.6
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEe---CCe--ecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIIL---NGY--LYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLT 156 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~---~G~--i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li 156 (375)
-|.||++++.+.+.|++.||+|||||||||+||+| ||+ +|++++|++||.+||++|.|+ .++.+.+.+.+.+++
T Consensus 53 gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP-~~~~e~~~~~~~~l~ 131 (372)
T 3dtg_A 53 GWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-ELPEEVFIESLRQLI 131 (372)
T ss_dssp EEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHH
T ss_pred cEeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCC-CCCHHHHHHHHHHHH
Confidence 49999999999999999999999999999999998 675 589999999999999999996 468888899988888
Q ss_pred HhcC--------CCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCC-CCc-CCCCeEEEE-eeeecC-CCCCCCCc-
Q 017245 157 AASQ--------CKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDD-FSQ-CKEGVKVIT-SSIPMK-PRLFATVK- 223 (375)
Q Consensus 157 ~~~~--------~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p-~~~-~~~Gv~l~~-s~~~~~-~~~~~~iK- 223 (375)
+.+. ..+.|||+.++++.+.+++.|.. .+.+++++.+.. +.. ..+...+.. .+..|. +......|
T Consensus 132 ~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~--~~~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~ 209 (372)
T 3dtg_A 132 AVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSN--EYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKF 209 (372)
T ss_dssp HHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCS--EEEEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCC
T ss_pred HHhhhhccccCCCCceEEEEEEEeecCccCcCCCC--CceeeeEecccccccccCcccceeecccceeecCcCCcchHHh
Confidence 7643 24569999999998888887763 345555554422 211 122333333 344444 33455556
Q ss_pred ccCChHHHHHHHHHHhcCCcEEEEEc--CCCcEeeeCCceEEEEE---eCCEEEecCCC-CccccHHHHHHHHHhhhhhh
Q 017245 224 NVNYLPNVLAKMEAEDKGASASIWID--EDGYVAEGPNVNVAFIT---HDKELVLPFFD-KILSGCTAKRLLELAPKLVE 297 (375)
Q Consensus 224 t~nyl~~vla~~eA~~~G~deaL~ld--~~G~V~E~s~sNvffv~---k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~ 297 (375)
++||+++++++++|+++|+||+||+| ++|+|+|++++|||||. |+|+|+||+++ +||+||||+.||++|+++
T Consensus 210 ~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~-- 287 (372)
T 3dtg_A 210 GGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDA-- 287 (372)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHH--
T ss_pred cCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHC--
Confidence 88999999999999999999999999 58899999999997665 66799999996 799999999999999999
Q ss_pred CCCcceEEEEEcCHHHHhcc------ceEEEEcCccceEEEEEECCe----ecCCCChhHHHHHHHHHHHHHhhcCCC--
Q 017245 298 QGRLKSVKTANLTVDEAKGA------AEMMYVGSTLPLLAITVWDEQ----PIGDGNVGELTMALSDLLWEDMVAGPE-- 365 (375)
Q Consensus 298 ~G~~~~V~er~i~~~eL~~a------dEvfl~nS~~gv~PV~~id~~----~i~~g~~gpvt~~L~~~~~~~i~~g~~-- 365 (375)
|+ +|+||+|+++||.+| ||+|+|||+.+|+||.+||++ .+++|++||+|++|+++|. +||.|..
T Consensus 288 -Gi--~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L~~~~~-~iq~G~~~d 363 (372)
T 3dtg_A 288 -GF--AVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLT-GIQRGTFAD 363 (372)
T ss_dssp -TC--EEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHH-HHHTTSSCC
T ss_pred -Cc--eEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHHHHHHH-HHHCCCCCC
Confidence 97 999999999999988 999999999999999999876 8999999999999999998 8999975
Q ss_pred --CCcccc
Q 017245 366 --TQRHCV 371 (375)
Q Consensus 366 --~~~~~v 371 (375)
.|..+|
T Consensus 364 ~~~W~~~v 371 (372)
T 3dtg_A 364 THGWMARL 371 (372)
T ss_dssp TTCCEEEC
T ss_pred CCCCcEeC
Confidence 366665
No 15
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.8e-54 Score=415.99 Aligned_cols=259 Identities=20% Similarity=0.193 Sum_probs=230.3
Q ss_pred ceeCCEecCCCCceeCcCCcccccCceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCC
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQC 161 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~ 161 (375)
+|.+|.++++..+.+++.||++ |||+||||++++|++|+|++|++||.+||+.|+++.|++.+++++.+.++++.++
T Consensus 17 ~~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~~~~~- 93 (285)
T 3csw_A 17 WRGKFRRADEISLDFSLFEKSL--QGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFK- 93 (285)
T ss_dssp ETTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEETTEETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHHTTCS-
T ss_pred EccCceEcccccCEeCCccccc--ceeeEEEEEEECCEECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhC-
Confidence 3779999999999999999999 9999999999999999999999999999999999888999999999999998876
Q ss_pred CCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCCcCCCCeEEEEeeeecCCC--CCCCCcccCChHHHHHHHHHHh
Q 017245 162 KKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMKPR--LFATVKNVNYLPNVLAKMEAED 239 (375)
Q Consensus 162 ~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~~~~~Gv~l~~s~~~~~~~--~~~~iKt~nyl~~vla~~eA~~ 239 (375)
.+++||+++.. .++ .+++.+.+.+.....+|+++.+++.++.++ .++++|++||+++++++++|++
T Consensus 94 ~~~~iR~~v~~---------~~~---~~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Kt~~~l~~~la~~~A~~ 161 (285)
T 3csw_A 94 QEVRIKVYLFP---------DSG---EVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVD 161 (285)
T ss_dssp SCEEEEEEECT---------TTC---CEEEEEEECCCCCCTTCEEEEECSSCCCCTTTSCTTCCBTTCHHHHHHHTTCSS
T ss_pred CCeEEEEEEEc---------CCC---EEEEEEEeCCCccccCCeEEEEEeEEecCCCCCCCccchhccHHHHHHHHHHHh
Confidence 77899999932 111 355555554432236799999887776443 3469999999999999999877
Q ss_pred cCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccc
Q 017245 240 KGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAA 318 (375)
Q Consensus 240 ~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~ad 318 (375)
+||+||+|++|+|+|++++|| |+++||+|+||+++ ++|+||||+.++++|+++ |+ +|+|++++++||.+||
T Consensus 162 --~de~L~ld~~G~V~Egs~sNi-f~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~---g~--~v~E~~i~~~dL~~ad 233 (285)
T 3csw_A 162 --CYDVILLGLNGQVCEGSFSNV-FLVKEGKLITPSLDSGILDGITRENVIKLAKSL---EI--PVEERVVWVWELFEAD 233 (285)
T ss_dssp --SSEEEEECTTSBEEEESSSEE-EEEETTEEEEECGGGTCCCCHHHHHHHHHHHHT---TC--CEEEECCBHHHHHTCS
T ss_pred --CCeEEEECCCCcEEEcCceEE-EEEECCEEEeCCCCCCccCCHHHHHHHHHHHHC---CC--eEEEEeCCHHHHhhCC
Confidence 999999999999999999999 55689999999996 799999999999999998 87 9999999999999999
Q ss_pred eEEEEcCccceEEEEEECCeecCCCChhHHHHHHHHHHHHHhhcCC
Q 017245 319 EMMYVGSTLPLLAITVWDEQPIGDGNVGELTMALSDLLWEDMVAGP 364 (375)
Q Consensus 319 Evfl~nS~~gv~PV~~id~~~i~~g~~gpvt~~L~~~~~~~i~~g~ 364 (375)
|+|+|||++||+||.+||++++++|++||++++|+++|. +++.|.
T Consensus 234 evfltns~~gv~PV~~id~~~~~~g~~g~~t~~L~~~~~-~~~~~~ 278 (285)
T 3csw_A 234 EMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFE-PFVLNL 278 (285)
T ss_dssp EEEEEETTTEEEEEEEETTEESCSSSCCHHHHHHHHHHH-HHHHTC
T ss_pred EEEEecCcceEEEEEEECCEECCCCCCCHHHHHHHHHHH-HHHhCc
Confidence 999999999999999999999999999999999999998 566663
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=9.3e-51 Score=382.24 Aligned_cols=229 Identities=26% Similarity=0.278 Sum_probs=200.5
Q ss_pred ceeCCEecCCCCceeCcCCccccc-CceeEEeEEEeCCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc-
Q 017245 82 SIFGGIILDPAMMVIPIDDHMVHR-GHGVFDTAIILNGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAAS- 159 (375)
Q Consensus 82 ~~~~g~~~~~~~~~lp~~D~~~~y-GdgvFET~rv~~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~- 159 (375)
.|+||... +++.||++|| |||+||||++++|++++|++|++||.+||+.|+++.|++ +++.+.+.++++.+
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~~G~~~~l~~Hl~RL~~Sa~~l~~~~p~~-~~l~~~i~~~~~~~~ 74 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAEGGRPLWLEEHLARLRRHALALGLSYPGD-EAFLEDLEALLRAFP 74 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEETTEETTHHHHHHHHHHHHHHTTCCCCCH-HHHHHHHHHHTTSCT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEECCEeCCHHHHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHHHhcC
Confidence 47899854 4899999999 999999999999999999999999999999999988888 99999999999877
Q ss_pred CCCCeeEEEEEecCCCCcccCCCCCCCceEEEEEEeCCCC-cCCCCeEEEEeeeecCCCCCCCCcccCChHHHHHHHHHH
Q 017245 160 QCKKGTLRFWLTAGPGDFLLSPAGCPTSAFYAVVIDDDFS-QCKEGVKVITSSIPMKPRLFATVKNVNYLPNVLAKMEAE 238 (375)
Q Consensus 160 ~~~~g~iR~~vs~G~g~~~~~p~~~~~~~~~~~~~~~p~~-~~~~Gv~l~~s~~~~~~~~~~~iKt~nyl~~vla~~eA~ 238 (375)
+..+++||+++++|.+.+++.|. +.+.. .+.+|+++.+++.+..++ ++++|++||+.+++++++|+
T Consensus 75 ~~~~~~vR~~v~~g~~~~~~~p~------------~~~~~~~~~~g~~l~~~~~r~~~~-~~~~Kt~n~~~~~~a~~~A~ 141 (246)
T 2zgi_A 75 KAPCLRLRFTVGEGVRLSEARPY------------APLPLSLYREGVRVRLTGYRVHPD-LARYKTGNYLPYRLALEEAR 141 (246)
T ss_dssp TCSEEEEEEEEETTEEEEEEEEC------------CCCCTHHHHHCBCEEEEEEECCTT-TTTSCBSCCHHHHHHHHHHH
T ss_pred CCCCEEEEEEEECCCCccCcCcC------------CCCchhHhhcCeEEEEecccCCCC-CccchhhhhHHHHHHHHHHH
Confidence 66789999999998654443221 01111 124689998887733344 78999999999999999999
Q ss_pred hcCCcEEEEEcCCCcEeeeCCceEEEEEeCCEEEecCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccc
Q 017245 239 DKGASASIWIDEDGYVAEGPNVNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAA 318 (375)
Q Consensus 239 ~~G~deaL~ld~~G~V~E~s~sNvffv~k~g~l~TP~~~~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~ad 318 (375)
++|+||+||+|++|+|+|++++|| |+++||+|+|| +++|+||||+.++++|+++ |+ +|+|++++++||.+
T Consensus 142 ~~g~de~l~ld~~G~v~Egs~sNi-f~v~~g~l~TP--~~iL~GitR~~ll~~a~~~---g~--~v~E~~i~~~dL~~-- 211 (246)
T 2zgi_A 142 KEGAFEGLLLDAFGHVVDGSRTSP-LLFREGTLYLL--EGGLEGITREKVAEAARGL---GL--RVERGLFRPEGLRG-- 211 (246)
T ss_dssp TTTCSEEEEECTTSCEEEESSSEE-EEEETTEEEEE--CSSCCCHHHHHHHHHHHHT---TC--EEEEECCCGGGCCS--
T ss_pred HcCCCEEEEECCCCCEEEcCCeEE-EEEECCEEECC--CCccCcHHHHHHHHHHHHC---CC--eEEEEeCCHHHHHh--
Confidence 999999999999999999999999 55699999999 7899999999999999998 87 99999999999999
Q ss_pred eEEEEcCccceEEEEEECCeec
Q 017245 319 EMMYVGSTLPLLAITVWDEQPI 340 (375)
Q Consensus 319 Evfl~nS~~gv~PV~~id~~~i 340 (375)
|+|+|||++||+||.+|||+.+
T Consensus 212 evfltns~~gi~pV~~id~~~~ 233 (246)
T 2zgi_A 212 HLLLAGSGVGLLPVRPPPPELL 233 (246)
T ss_dssp EEEEEETTTEEEEBSSCCGGGH
T ss_pred hHeeecChhheEEEEEEChHHH
Confidence 9999999999999999998754
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=1.1e-43 Score=329.08 Aligned_cols=204 Identities=18% Similarity=0.157 Sum_probs=178.1
Q ss_pred ccCceeEEeEEEe-CCeecCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCeeEEEEEecCCCCcccCCC
Q 017245 104 HRGHGVFDTAIIL-NGYLYELDVHLDRFLRSAVSARISSPFPRSTLRSILVQLTAASQCKKGTLRFWLTAGPGDFLLSPA 182 (375)
Q Consensus 104 ~yGdgvFET~rv~-~G~i~~ld~Hl~RL~~Sa~~l~i~~p~~~e~l~~~I~~li~~~~~~~g~iR~~vs~G~g~~~~~p~ 182 (375)
.-|+|+||||+++ +|++++|++|++||.+||+.|+++ ++.+++.+.+.++++ ++..+++||+.+++| |.
T Consensus 13 ~~g~glFEtir~~~~G~~~~l~~Hl~RL~~Sa~~l~~~--~~~~~l~~~i~~~~~-~~~~~~~iR~~~~~~-g~------ 82 (221)
T 3qqm_A 13 TADFELIETMRWQPGTSFLRFDRHLARLYGSAAELGFA--CDPQRIAEVLSDALD-GARTAMRTRLALARN-GD------ 82 (221)
T ss_dssp TSCCEEEEEEEEETTTEETTHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHT-TCCSCEEEEEEEETT-SC------
T ss_pred CCCCEEEEEEEEecCCcCcCHHHHHHHHHHHHHHcCCC--CCHHHHHHHHHHHHh-cCCCCEEEEEEEEcC-CC------
Confidence 4689999999999 999999999999999999999995 689999999999987 566788999999987 21
Q ss_pred CCCCceEEEEEEeCCCCcCCCCeEEEEeeeecC-CCCCCCCcccCChHHHHHHHHHHhcCCcEEEEEcCCCcEeeeCCce
Q 017245 183 GCPTSAFYAVVIDDDFSQCKEGVKVITSSIPMK-PRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPNVN 261 (375)
Q Consensus 183 ~~~~~~~~~~~~~~p~~~~~~Gv~l~~s~~~~~-~~~~~~iKt~nyl~~vla~~eA~~~G~deaL~ld~~G~V~E~s~sN 261 (375)
+.+.+.+.+.....+|+++.+++.++. ++.++++|++||+.+++++++|+++|+||+||+|++|+|+|++++|
T Consensus 83 ------~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~Kt~nr~~~~~a~~~a~~~g~~e~l~l~~~g~v~E~s~sN 156 (221)
T 3qqm_A 83 ------ATASAQPYEPLAADKVWILRLARTRLDSQNTLLRHKTSRRQLYTHARSEYLVTQADEVLLANERGEICEGTITN 156 (221)
T ss_dssp ------EEEEEEECCCCCTTCCEEEEECSCCBCTTCGGGGSCBSCCHHHHHHHHTSCTTTCSEEEEEBTTSCEEEESSCE
T ss_pred ------EEEEEEcCCCCCCCCCEEEEEeeeEecCCCcchhchhcchHHHHHHHHHHHhcCCcEEEEECCCCeEEEcCcee
Confidence 333444444333357999999887764 4567899999999999999999999999999999999999999999
Q ss_pred EEEEEeC-CEEEecCCC-CccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccceEEEEcCccceEEEEE
Q 017245 262 VAFITHD-KELVLPFFD-KILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITV 334 (375)
Q Consensus 262 vffv~k~-g~l~TP~~~-~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~adEvfl~nS~~gv~PV~~ 334 (375)
||| +++ |+|+||+++ ++|+||||+.++++ + +|+|+.++++||.+|||+|+|||++||+||+-
T Consensus 157 if~-~~~~~~l~TP~~~~~~L~GitR~~ll~~-------~---~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l 220 (221)
T 3qqm_A 157 VFA-DFGDGVLATPRLDCGLLPGVLRAELLDE-------G---RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKL 220 (221)
T ss_dssp EEE-ECSSSCEEEECGGGTCCCCHHHHHHHHT-------T---SEEEECCCHHHHTTCSEEEEEETTTEEEEEEE
T ss_pred EEE-EeCCCEEECCCCccCcchHHHHHHHHhh-------C---cEEEEeCCHHHHHhCCEEEEEecceeEEEEEE
Confidence 954 576 999999986 79999999999985 3 59999999999999999999999999999974
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=7.2e-41 Score=303.93 Aligned_cols=189 Identities=14% Similarity=0.188 Sum_probs=159.2
Q ss_pred ccCceeEEeEEEeCCeecCHHHHHHHHHHHH-HHcCCC--CCCCHHHHHHHHHHHHHhcCCCCeeEEEEEecCCCCcccC
Q 017245 104 HRGHGVFDTAIILNGYLYELDVHLDRFLRSA-VSARIS--SPFPRSTLRSILVQLTAASQCKKGTLRFWLTAGPGDFLLS 180 (375)
Q Consensus 104 ~yGdgvFET~rv~~G~i~~ld~Hl~RL~~Sa-~~l~i~--~p~~~e~l~~~I~~li~~~~~~~g~iR~~vs~G~g~~~~~ 180 (375)
+||+|+||||++++|++++|++|++||.+|| +.++++ .|++.+++.+.+. ++++++..+++||+++++|. ..+.
T Consensus 2 ~~g~~vfEt~r~~~g~~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~iR~~~~~g~--~~~~ 78 (194)
T 3ceb_A 2 MWQFPLFETILIEQGQAKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHREGLIRCRIDYNHHD--YVLQ 78 (194)
T ss_dssp CTTCCEEEEEEEETTEECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCSSSEEEEEEEECSSC--EEEE
T ss_pred CCCCeEEEEEEEECCEecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCCCCCEEEEEEEeCCc--cEEE
Confidence 6999999999999999999999999999999 999998 6799999999988 88877767789999999872 2211
Q ss_pred CCCCCCceEEEEEEeCCCCcCCCCeEEEEeeeec-CCCCCCCCcccCChHHHHHHHHHHhcCCcEEEEEcCCCcEeeeCC
Q 017245 181 PAGCPTSAFYAVVIDDDFSQCKEGVKVITSSIPM-KPRLFATVKNVNYLPNVLAKMEAEDKGASASIWIDEDGYVAEGPN 259 (375)
Q Consensus 181 p~~~~~~~~~~~~~~~p~~~~~~Gv~l~~s~~~~-~~~~~~~iKt~nyl~~vla~~eA~~~G~deaL~ld~~G~V~E~s~ 259 (375)
.. |+++ .++ .+..+. .++.++++|++||+ ++++++|+++|+||+||+ ++|+|+|+++
T Consensus 79 ------------~~--p~~~--~~~---~~~~~~~~~~~~~~~Kt~n~~--~~~~~~A~~~g~de~l~l-~~G~v~E~s~ 136 (194)
T 3ceb_A 79 ------------CF--PYQQ--KVY---RTFKPVFCDHIDYSLKFSDRT--LLNNLLKQKEECDEIMII-RQGKVTDCSI 136 (194)
T ss_dssp ------------EE--EECC--CCC---CCEEEEECSSCCCSSCBSCCH--HHHHHHGGGTTSSEEEEE-ETTEECCCSS
T ss_pred ------------Ee--cCCC--CcE---EEEEEecCCCcchhhcccCHH--HHHHHHHhhCCCCEEEEE-eCCEEEEecc
Confidence 11 1111 122 111111 24467899999998 778999999999999999 9999999999
Q ss_pred ceEEEEEeCCEEEecCCCCccccHHHHHHHHHhhhhhhCCCcceEEEEEcCHHHHhccceEEEEcCccce
Q 017245 260 VNVAFITHDKELVLPFFDKILSGCTAKRLLELAPKLVEQGRLKSVKTANLTVDEAKGAAEMMYVGSTLPL 329 (375)
Q Consensus 260 sNvffv~k~g~l~TP~~~~iL~GiTR~~vlela~~l~~~G~~~~V~er~i~~~eL~~adEvfl~nS~~gv 329 (375)
+|| |+++||+|+||+ +++|+||||+.+++ ++ +|+|+.++++||.+|||+|+|||++|+
T Consensus 137 sNi-f~~~~g~l~TP~-~~~L~GitR~~ll~--------~~--~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 137 GNL-IFRQNNQWITPD-KPLLEGTQRAKLLE--------QK--KIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp SEE-EEEETTEEEEES-SCSSCCHHHHHHHH--------TT--SSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred EEE-EEEECCEEECCC-CCCcChHHHHHHHc--------CC--CEEEecCCHHHHhhccEEEEEecccCC
Confidence 999 556999999999 89999999999998 33 799999999999999999999999885
No 19
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=29.96 E-value=22 Score=27.07 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=31.1
Q ss_pred CCcceEEEEEcCHHHHhccceEEEEcCccceEEEEEE-CCeecCCCChhHHHHHHHHH
Q 017245 299 GRLKSVKTANLTVDEAKGAAEMMYVGSTLPLLAITVW-DEQPIGDGNVGELTMALSDL 355 (375)
Q Consensus 299 G~~~~V~er~i~~~eL~~adEvfl~nS~~gv~PV~~i-d~~~i~~g~~gpvt~~L~~~ 355 (375)
|+ +.++.+|..+.- ..+++.-.+...--+|+.-| ||+.+.+.....+.++|.++
T Consensus 28 gi--~y~~idi~~d~~-~~~~~~~~~~G~~tVP~I~i~Dg~~l~~~~~~el~~~L~el 82 (92)
T 2lqo_A 28 RI--AYDEVDIEHNRA-AAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAKLVKI 82 (92)
T ss_dssp TC--CCEEEETTTCHH-HHHHHHHHSSSSSCSCEEEETTSCEEESCCHHHHHHHHHHH
T ss_pred CC--ceEEEEcCCCHH-HHHHHHHHcCCCCEeCEEEEeCCEEEeCCCHHHHHHHHHHh
Confidence 86 888888875332 12233222333456799988 56666543455666665554
No 20
>2h8b_A Insulin-like 3; insulin/relaxin suparfamily fold, hormone/growth factor complex; NMR {Synthetic} PDB: 2k6t_A 2k6u_A
Probab=26.41 E-value=7.2 Score=22.68 Aligned_cols=15 Identities=53% Similarity=0.806 Sum_probs=12.4
Q ss_pred CccccHHHHHHHHHh
Q 017245 278 KILSGCTAKRLLELA 292 (375)
Q Consensus 278 ~iL~GiTR~~vlela 292 (375)
-+|.|+||+-+|.++
T Consensus 10 CClsGCt~QDLL~lC 24 (26)
T 2h8b_A 10 CCLSGCTQQDLLTLC 24 (26)
T ss_dssp HHHTCBCHHHHHTTC
T ss_pred HHhcCCcHHHHHhhC
Confidence 369999999988765
No 21
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=24.00 E-value=88 Score=24.64 Aligned_cols=82 Identities=17% Similarity=0.130 Sum_probs=49.3
Q ss_pred EEecCCCCccccHHHHHHHH-HhhhhhhCCCcceEEEE-------EcCHHHHhccceEEEEcCccceEEEEEECCeecCC
Q 017245 271 LVLPFFDKILSGCTAKRLLE-LAPKLVEQGRLKSVKTA-------NLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGD 342 (375)
Q Consensus 271 l~TP~~~~iL~GiTR~~vle-la~~l~~~G~~~~V~er-------~i~~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~ 342 (375)
.+|....|+=...+....|+ .|+++ |+-++|+.+ .++.+|+.+||-+++.+.. .+- -.+++|+++-.
T Consensus 7 aVTaCptGiAhTymAaeaL~~aA~~~---G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~ 81 (106)
T 2r48_A 7 AITSCPNGIAHTYMAAENLQKAADRL---GVSIKVETQGGIGVENKLTEEEIREADAIIIAADR-SVN-KDRFIGKKLLS 81 (106)
T ss_dssp EEEECSSCSHHHHHHHHHHHHHHHHH---TCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS-CCC-CGGGTTSBEEE
T ss_pred EEecCCCcHHHHHHHHHHHHHHHHHC---CCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEE
Confidence 34543356766667666665 55666 874455433 5999999999999999874 332 45667766533
Q ss_pred CChhHHHHHHHHHHH
Q 017245 343 GNVGELTMALSDLLW 357 (375)
Q Consensus 343 g~~gpvt~~L~~~~~ 357 (375)
.......+.=...+.
T Consensus 82 ~~v~~ai~~p~~~l~ 96 (106)
T 2r48_A 82 VGVQDGIRKPEELIQ 96 (106)
T ss_dssp ECHHHHHHCHHHHHH
T ss_pred eCHHHHHHCHHHHHH
Confidence 223333333333343
No 22
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.67 E-value=1.5e+02 Score=23.37 Aligned_cols=82 Identities=18% Similarity=0.123 Sum_probs=48.8
Q ss_pred EEecCCCCccccHHHHHHHH-HhhhhhhCCCcceEEEE-------EcCHHHHhccceEEEEcCccceEEEEEECCeecCC
Q 017245 271 LVLPFFDKILSGCTAKRLLE-LAPKLVEQGRLKSVKTA-------NLTVDEAKGAAEMMYVGSTLPLLAITVWDEQPIGD 342 (375)
Q Consensus 271 l~TP~~~~iL~GiTR~~vle-la~~l~~~G~~~~V~er-------~i~~~eL~~adEvfl~nS~~gv~PV~~id~~~i~~ 342 (375)
.+|....|+=...+....|+ .|+++ |+-++|+.+ .++.+|+.+||-+++.+.. .+- -.+++|+++-.
T Consensus 7 aVTaCptGiAhTymAaeaL~~aA~~~---G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~-~v~-~~RF~GK~v~~ 81 (106)
T 2r4q_A 7 AVTACPTGIAHTFMAADALKEKAKEL---GVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK-QVE-MERFKGKRVLQ 81 (106)
T ss_dssp EEEECSCC--CHHHHHHHHHHHHHHH---TCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS-CCC-CGGGTTSBEEE
T ss_pred EEecCCCcHHHHHHHHHHHHHHHHHC---CCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC-ccC-HhHcCCCeEEE
Confidence 34544457777777766665 55666 875556433 5999999999999999874 332 45667766533
Q ss_pred CChhHHHHHHHHHHH
Q 017245 343 GNVGELTMALSDLLW 357 (375)
Q Consensus 343 g~~gpvt~~L~~~~~ 357 (375)
.......+.=...+.
T Consensus 82 ~~v~~ai~~p~~~l~ 96 (106)
T 2r4q_A 82 VPVTAGIRRPQELIE 96 (106)
T ss_dssp ECHHHHHHCHHHHHH
T ss_pred eCHHHHHHCHHHHHH
Confidence 223333333333444
No 23
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=21.15 E-value=70 Score=18.86 Aligned_cols=22 Identities=36% Similarity=0.619 Sum_probs=17.1
Q ss_pred CcEeeeCCceEEEEEeCCEEEe
Q 017245 252 GYVAEGPNVNVAFITHDKELVL 273 (375)
Q Consensus 252 G~V~E~s~sNvffv~k~g~l~T 273 (375)
|++.|+...-.+.+.++|.|+-
T Consensus 1 ~~i~eAP~Dg~~Yvr~dg~WV~ 22 (27)
T 2ww6_A 1 GYIPEAPRDAQAYVRKFGEWVL 22 (27)
T ss_dssp CBCBCCCSSSCEEEEETTEEEE
T ss_pred CCCccCCcCcceeEEEcCeEEE
Confidence 5677888777778888998874
Done!