BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017247
(375 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 350 bits (897), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 232/325 (71%), Gaps = 18/325 (5%)
Query: 6 EQYPSSFLLDALYCEEEELEDEVIDQEDDECSQNKNPACLFS-LLLLEQDLFWEDEELLS 64
E+ +SFLLDALYCEEE+ +DE +E +N + + S ++L+QDLFWEDE+L++
Sbjct: 11 EEQSNSFLLDALYCEEEKWDDE-----GEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVT 65
Query: 65 LFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFL 124
LFSKEE+Q L D L R EAV W+L+VNAHYGFSTL A+LAI YLD+F+
Sbjct: 66 LFSKEEEQGLS------CLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFI 119
Query: 125 RSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVL 184
S+ Q DKPWM+QL++V CLSLAAKVEETQVPLLLD QVE KYVFE K IQRMELL+L
Sbjct: 120 CSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLIL 179
Query: 185 STLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLAT 244
STLEWKMH +TPISF+DHIIRRLGLK + HW+FL +C RLLL+++SDSR V YLPSV+A
Sbjct: 180 STLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAA 239
Query: 245 ATMMHIIDQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLILELANAKTNAN---SNPHKR 301
ATMM II+QV+P +P+ YQ LLGVL ++KEKV CY LIL+L + + KR
Sbjct: 240 ATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQLPVDRIGLQIQIQSSKKR 299
Query: 302 KFEAIPGSPGG---VIDATVFSCDE 323
K S VIDA F+ DE
Sbjct: 300 KSHDSSSSLNSPSCVIDANPFNSDE 324
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 314 bits (804), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 183/374 (48%), Positives = 254/374 (67%), Gaps = 36/374 (9%)
Query: 13 LLDALYCEEEE--LEDEVIDQEDDECSQNKNPACL-FSLLLLEQDLFWEDEELLSLFSKE 69
+LD LYCEEE +ED++ D D + + + + + F L L W+D+E+LSL SKE
Sbjct: 17 VLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLLDMFLWDDDEILSLISKE 76
Query: 70 EQQLLKQETQTHYKDS---DVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRS 126
ET + + LV R EA++WVL+V +HYGF++LTAILA+NY DRF+ S
Sbjct: 77 ------NETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTS 130
Query: 127 FHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLST 186
Q DKPWM QL+AV LSLAAKVEE QVPLLLDLQVE A+Y+FE K IQRMELL+LST
Sbjct: 131 IKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILST 190
Query: 187 LEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATAT 246
L+W+MHPVTPISF DHIIRR G K +F ++CERLL+++++D+R + Y PSVLATA
Sbjct: 191 LQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAI 250
Query: 247 MMHIIDQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLILELANAKTNANSNPHKRKFEAI 306
M+ + ++++P + V+YQ+Q+ +LK+++EKV++CY+L+LE NP K++ +
Sbjct: 251 MILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLE---------HNPSKKRMMNL 301
Query: 307 --PGSPGGVIDATVFSCDESSNDSWS-VASSSVLSSPSSPEPLFKKSRVQDPQMTLPMPS 363
SP GV+D D+SSN SW+ ++SV SS SSPEPL K+ RVQ+ QM LP
Sbjct: 302 VDQDSPSGVLDF-----DDSSNSSWNVSTTASVSSSSSSPEPLLKRRRVQEQQMRLP--- 353
Query: 364 LNLNRV---IVGSP 374
++NR+ ++ SP
Sbjct: 354 -SINRMFLDVLSSP 366
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/363 (48%), Positives = 241/363 (66%), Gaps = 19/363 (5%)
Query: 13 LLDALYCEEE-ELEDEVIDQEDDECSQNKNPACLFSLLLLEQDLFWEDEELLSLFSKEEQ 71
+LD L+CEEE E ++V D C ++ +L L + D+ W+D+EL +L SK+E
Sbjct: 16 VLDGLFCEEESEFHEQV-----DLCDESVEKFPFLNLGLSDHDMLWDDDELSTLISKQEP 70
Query: 72 QLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQI 131
L + D + LV+ R +A++W+ KV +HYGF++LTA+LA+NY DRF+ S FQ
Sbjct: 71 CLYDE-----ILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQT 125
Query: 132 DKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKM 191
DKPWM QL A+ CLSLAAKVEE +VP LLD QVE A+YVFE K IQRMELLVLSTL+W+M
Sbjct: 126 DKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRM 185
Query: 192 HPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHII 251
HPVTPISF DHIIRR K+ EFL RCE LLL+++ DSR +S+ PSVLATA M+ +I
Sbjct: 186 HPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVI 245
Query: 252 DQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLILELANAKTNANSNPHKRKFEAIPGSPG 311
++ + YQ+QL+ +LK+ EKV+ CY+L+L+ + +K + + P SP
Sbjct: 246 RDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSPSKKRMMNWMQQ------PASPI 299
Query: 312 GVIDATVFSCDESSNDSWSVASSSVLSSPSSPEPLFKKSRVQDPQMTLPMPSLNLNRVIV 371
GV DA+ S +SSN+SW V++S+ +SS S EPL K+ RVQ+ QM L + V+
Sbjct: 300 GVFDASFSS--DSSNESWVVSASASVSSSPSSEPLLKRRRVQEQQMRLSSINRMFFDVLS 357
Query: 372 GSP 374
SP
Sbjct: 358 SSP 360
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 142/231 (61%), Gaps = 10/231 (4%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R +A++W+ KV+++Y F L+ LA+NYLDRFL SF+ D+ WM QLL+V+CLSLA K+
Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKM 154
Query: 152 EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKT 211
EET VPL +DLQV A+YVFE + I+RMEL+V+ TL+W++ VTP SF+ + + +
Sbjct: 155 EETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGK 214
Query: 212 SLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQLLG--V 269
+ C L + + DSR +S+ PS +A A ++ ++ + N N LG
Sbjct: 215 PPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAE----NQFLVFNSALGESE 270
Query: 270 LKISKEKVSDCYKLILELANAKTNANSNPHKRKFEAIPGSPGGVIDATVFS 320
+ ++KE V CY+L++E A K NSN ++P SP V+DA FS
Sbjct: 271 IPVNKEMVMRCYELMVEKALVKKIRNSNASS----SVPHSPITVLDAACFS 317
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 64 SLFSKEEQQLL---KQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYL 120
S KE +Q++ + E T + + + R A++W+ KV A+Y F L A LA+NYL
Sbjct: 73 SFMEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYL 132
Query: 121 DRFLRSFHFQI--DKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQR 178
DRFL S F + D PWM QLL V CLSLAAK+EET P LDLQV +YVF+ + I R
Sbjct: 133 DRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHR 192
Query: 179 MELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYL 238
ME++VL+TL+W+M VTP +++ H + ++ + E + RC ++L+ + + + +
Sbjct: 193 MEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFR 252
Query: 239 PSVLATATMMHIIDQVEPVNPVDYQNQL-LGVLKISKEKVSDCYKLILELANAKTNANSN 297
PS +ATA + ++ V +D+ L L + K+ V C++ + E+A N+ ++
Sbjct: 253 PSEIATAVALSVVADGGRV--LDFGGVLESSKLPVDKDNVGRCHQAMQEMALVMQNSTAS 310
Query: 298 P 298
P
Sbjct: 311 P 311
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 169/322 (52%), Gaps = 29/322 (9%)
Query: 27 EVIDQEDDECSQNKNPACLFSLLLLEQDLFWEDEELLSLFSKEEQQLLKQET-----QTH 81
+V+ + C+ P C+ + D EE ++ + E + +E +
Sbjct: 36 DVVAGKRARCAGPPPPPCVD---VAGVDFAVPSEECVARLVETEADHMPREDYAERLRAG 92
Query: 82 YKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLA 141
D D+ + R +A++W+ KV+++Y F+ LTA LA+NYLDRFL + K WM QLLA
Sbjct: 93 GGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLA 152
Query: 142 VTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLD 201
V CLSLAAK+EET VP LDLQV +YVFE K IQRMELLVLSTL+W+M VTP S++D
Sbjct: 153 VACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVD 212
Query: 202 HIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVD 261
+ +R L L+L + + + + PS +A A ++ +
Sbjct: 213 YFLRELNGGDPPSGRSALLSSELILCIARGTECLGFRPSEIAAAVAAAVVGE-------- 264
Query: 262 YQNQLLGVLKISKEKVSDCYKLI--LELANAKTNANSNPHKRKF--EAIPGSPGGVIDAT 317
+ ++KE++S C ++I +EL + K ++ S R F +IP SP GV+DA
Sbjct: 265 ---EHAAFSHVNKERMSHCQEVIQAMELIHPKPSSPS----RVFVSSSIPRSPTGVLDAA 317
Query: 318 VFSCDESSNDSWSVASSSVLSS 339
C +D +VAS SS
Sbjct: 318 --GCLSYRSDDSAVASHYAASS 337
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%)
Query: 85 SDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTC 144
D+ + R++A++W+LKV AHY F L L++NYLDRFL S+ DK W QLLAV+C
Sbjct: 90 GDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSC 149
Query: 145 LSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHII 204
LSLA+K+EET VP ++DLQVE K+VFE K I+RMELLV++TL W++ +TP SF+D+ +
Sbjct: 150 LSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFV 209
Query: 205 RRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQN 264
++ S + + R R +L + + PS +A A + + E +D +
Sbjct: 210 DKISGHVSEN--LIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGE-TECIDEEK 266
Query: 265 QLLGVLKISKEKVSDCYKLILELA---NAKTNANSNPHKR-KFEAIPGSPGGVIDATVFS 320
L ++ + +E+V C L+ L N + + S R A+P SP GV++AT S
Sbjct: 267 ALSSLIYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEATCLS 326
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 134/244 (54%), Gaps = 6/244 (2%)
Query: 57 WEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILA 116
W + + E + + + ++ + AR ++V W+LKV A+Y F LTA LA
Sbjct: 47 WPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLA 106
Query: 117 INYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAI 176
+NY+DRFL + W +QLLAV CLSLAAK+EE VP L D QV G KY+FE K I
Sbjct: 107 VNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTI 166
Query: 177 QRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVS 236
+RMELLVLS L+W++ VTP F+ ++ + F+ ++L+ + ++ +
Sbjct: 167 KRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLE 226
Query: 237 YLPSVLATATMMHIIDQVEP----VNPVDYQNQLLGVLKISKEKVSDCYKLILELANAKT 292
Y PS +A A ++ + +++ VNP +++ +SKEK+ CY+L+ +A
Sbjct: 227 YWPSSIAAAAILCVANELPSLSSVVNP--HESPETWCDGLSKEKIVRCYRLMKAMAIENN 284
Query: 293 NANS 296
N+
Sbjct: 285 RLNT 288
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 159/298 (53%), Gaps = 14/298 (4%)
Query: 59 DEELLSLFSKEEQQLLKQETQTHY----KDSDVLVVARSEAVEWVLKVNAHYGFSTLTAI 114
D+ + +L +EEQQ + E D LV RS+A++W+ KV+ Y F LTA+
Sbjct: 53 DDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAV 112
Query: 115 LAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETK 174
L++NYLDRFL F ++ M QLLAV LSLAAK+EET VP LDLQV AKYVFET+
Sbjct: 113 LSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETR 172
Query: 175 AIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRS 234
I+RMEL VL+ L+W+M VT SF+D+ + + + L R L+L+ +
Sbjct: 173 TIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEF 232
Query: 235 VSYLPSVLATATMMHIIDQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLILELANAKTNA 294
+ + PS +A + + +++ E ++ + KE+V CY++I + + N
Sbjct: 233 LVFRPSEIAASVALVALEEHETSM---FERVATCYKNLKKERVLRCYEMIQDKIIMR-NI 288
Query: 295 NSNPHKRKFEAIPGSPGGVIDATVFSCDESSNDSWSVASSSVLSSPSSPEPLFKKSRV 352
F +IP SP GV+DA +S + +++ SS SS K+ R+
Sbjct: 289 MRQSAGSVF-SIPKSPIGVLDAAACISQQSEDTFVGSPATNYESSASS-----KRRRI 340
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 114/184 (61%), Gaps = 2/184 (1%)
Query: 59 DEELLSLFSKEEQQLLKQETQTHYKDS--DVLVVARSEAVEWVLKVNAHYGFSTLTAILA 116
+E + SL +E+ + + + + DV + RSEA+ W+ +V +Y FS++TA LA
Sbjct: 75 EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLA 134
Query: 117 INYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAI 176
+NYLDRFL + + WM QLL+V CLS+AAK+EET VP LDLQ+ +++FE + I
Sbjct: 135 VNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETI 194
Query: 177 QRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVS 236
RMELLVL+ L W+M VTP S++D+ +R+L + +L R L+L + + + +
Sbjct: 195 HRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAGTGFLE 254
Query: 237 YLPS 240
+ PS
Sbjct: 255 FRPS 258
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 117/206 (56%), Gaps = 28/206 (13%)
Query: 90 VARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAA 149
AR+E+V W+LKV + GF LTA LA+NY+DRFL H + W +QLLAV CLSLAA
Sbjct: 80 AARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAA 139
Query: 150 KVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLD-----HII 204
K+EET VP LLDLQVE ++YVFE + I RME L+L+ L W++ VTP +F+D HI
Sbjct: 140 KMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACKHIS 199
Query: 205 RRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEP---VNPVD 261
+ + +FL C PS +A A ++ + VNP
Sbjct: 200 NAMVQNANSDIQFLDHC-----------------PSSMAAAAVLCATGETPSLAFVNPEL 242
Query: 262 YQNQLLGVLKISKEKVSDCYKLILEL 287
N +G +++E +S CY+L+ +L
Sbjct: 243 AVNWCIG---LAEEGISSCYQLMQQL 265
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 2/200 (1%)
Query: 89 VVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLA 148
+ AR+++V W+LKV YG +TA LA++Y+DRFL S H W +QLLAVTCLSLA
Sbjct: 113 LAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFL-SLHRLPGNGWAMQLLAVTCLSLA 171
Query: 149 AKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLG 208
AK+EET VP +LDLQ+E A+Y+FE + I RMELLVL L+W++ +TP +F+ ++
Sbjct: 172 AKMEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVD 231
Query: 209 LKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQL-L 267
E + + ++ L + D+ + + PS +A A ++ ++ + +D+ +
Sbjct: 232 PNGKHIRELIHQATQVTLATIHDTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSW 291
Query: 268 GVLKISKEKVSDCYKLILEL 287
++ + +E + CY+L+ +L
Sbjct: 292 RIIGLDEEAIIRCYRLMQQL 311
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 24/213 (11%)
Query: 59 DEELLSLFSKEEQQLLKQETQTHYKDSDV-LVVARSEAVEWVLKVNAHYGFSTLTAILAI 117
+E ++ + KE+Q L + + D+ L V R +A+ W+ K + F L LA+
Sbjct: 44 EEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAM 103
Query: 118 NYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQ 177
NYLDRFL K W++QLLAV CLSLAAK+EET+VP+L+DLQV ++VFE K++Q
Sbjct: 104 NYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQ 163
Query: 178 RMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCE---------RLLLTL 228
RMELLVL+ L+W++ +TP S++ + +R++ +C+ R L +
Sbjct: 164 RMELLVLNKLKWRLRAITPCSYIRYFLRKMS-----------KCDQEPSNTLISRSLQVI 212
Query: 229 VSDSRSVSYL---PSVLATATMMHIIDQVEPVN 258
S ++ + +L PS +A A + + +++ V+
Sbjct: 213 ASTTKGIDFLEFRPSEVAAAVALSVSGELQRVH 245
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 93 SEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVE 152
SE+V W+LKV + +GF TA LA++Y+DRF+ S D W QLL V CLSLAAK+E
Sbjct: 126 SESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLP-DHGWASQLLCVACLSLAAKME 184
Query: 153 ETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTS 212
E+ P LLDLQ+EG +++FE + IQRMEL+VL L+W++ VTP +F+D ++G
Sbjct: 185 ESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGR 244
Query: 213 LHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQ----VEPVNPVDYQNQLLG 268
R +++L+ + + +++ S +A A ++ +++ + + V ++
Sbjct: 245 SSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASW 304
Query: 269 VLKISKEKVSDCYKLILELANAKTN 293
+ +++E++S CY+L+ NA
Sbjct: 305 CIGLTEERISSCYQLLQRALNATAR 329
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 134/243 (55%), Gaps = 23/243 (9%)
Query: 89 VVARSEAVEWVLKVNAHYGFSTLTAILAINYLDR-FLRSFHFQIDKPWMIQLLAVTCLSL 147
V AR AV W L+ A GFS LTA LA+ YLDR FL D+PWM +L AV C++L
Sbjct: 75 VSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVAL 134
Query: 148 AAKVEETQVPLLLDLQVEGAK-------YVFETKAIQRMELLVLSTLEWKMHPVTPISFL 200
AAKVEET+VP+LLDLQ+ A+ YVFE K ++RMELLVLS L W+MHPVTP+S+L
Sbjct: 135 AAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194
Query: 201 DHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPV 260
++ + H L C+ LL L+ D R + PS A A ++
Sbjct: 195 QPLL------GTAHAARLHHCDTALLALMPDWRWPRHRPSAWAAAALLATAGWC--GGGG 246
Query: 261 DYQNQLLGVLKISKEKVSDCYKLILELANAKTNANSNP---HKRKFEA----IPGSPGGV 313
+LL ++ K+++++C K+I E A A +KRK A P SP GV
Sbjct: 247 GDDAELLALIDAPKDEMAECAKIISEEAAAAAAGGIVIGGENKRKGAAGLYSAPASPSGV 306
Query: 314 IDA 316
I A
Sbjct: 307 IGA 309
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 116/219 (52%), Gaps = 10/219 (4%)
Query: 22 EELEDEVIDQEDDECSQNKNPACLFSLLLLEQDLFWEDEELLS-LFSKEEQQLLKQETQT 80
E +E ++ DDE S + + +F + E EE++ + KE Q + +
Sbjct: 3 EFMEPNLVSNFDDEKSNSVDTRSIFQM-----GFPLESEEIVREMIEKERQHSPRDDYLK 57
Query: 81 HYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLL 140
++ D+ R +A+ W+ K F L LA+NYLDRFL K W +QLL
Sbjct: 58 RLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLL 117
Query: 141 AVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFL 200
AV CLSLAAK+EET VP L+ LQV +VFE K++QRMELLVL+ L W++ VTP S++
Sbjct: 118 AVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYV 177
Query: 201 DHIIRRL-GLKTSLHWEFLKRCERLLLTLVSDSRSVSYL 238
+ + ++ G H + R L + S ++ + +L
Sbjct: 178 RYFLSKINGYDQEPHSRLVTRS---LQVIASTTKGIDFL 213
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 91 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDK---PWMIQLLAVTCLSL 147
AR AV+W+L+ ++GF TA LAI Y DRF ++D+ PW +LL++ C+S+
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFC--LRRRVDREAMPWAARLLSIACVSV 156
Query: 148 AAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRL 207
AAK+EE Q P L + G + VF + +I+RMELLVLSTL W+M VTP FL RL
Sbjct: 157 AAKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRL 215
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 9/197 (4%)
Query: 91 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAK 150
AR+ V W++K NA + FS TA +A+ YLDRFL DK W +QLL+V CLSLAAK
Sbjct: 99 ARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAK 158
Query: 151 VEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLK 210
VEE + P L + +++ +++ ++ RMELLVL+TL+W+M TP S+L+ + +
Sbjct: 159 VEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAK--FR 212
Query: 211 TSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQLLGVL 270
+ R + + SV Y PS +A A ++ I E +D ++G L
Sbjct: 213 HDERKAIVLRAIECIFASIKVISSVGYQPSTIALAAIL-IARNKETAPNLDELKSVVGSL 271
Query: 271 --KISKEKVSDCYKLIL 285
++ V CY ++
Sbjct: 272 WQQLDTGHVYSCYNKMM 288
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 8/227 (3%)
Query: 64 SLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRF 123
SLF E Q + K S L+ R++A+ + + + + +LT LA+NYLDRF
Sbjct: 30 SLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRF 88
Query: 124 LRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLV 183
L S KPW+++L++++C+SL+AK+ + + + DL VEG F+ + I+RME ++
Sbjct: 89 LSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMS-VSDLPVEGE--FFDAQMIERMENVI 145
Query: 184 LSTLEWKMHPVTPISFLDHIIRRLGLKTS----LHWEFLKRCERLLLTLVSDSRSVSYLP 239
L L+W+M VTP SFL I LK L + L +L D + + P
Sbjct: 146 LGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKP 205
Query: 240 SVLATATMMHIIDQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLILE 286
SV+A A ++ ++ P+ + N++ ++K+++ +CYK I E
Sbjct: 206 SVIAGAALLFASFELCPLQFPCFSNRINQCTYVNKDELMECYKAIQE 252
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 86 DVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDK---PWMIQLLAV 142
D +AR V+W+L+ +GF TA LAI Y DRF ID+ PW +LLAV
Sbjct: 103 DWFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRF--CLRRCIDRSVMPWAARLLAV 160
Query: 143 TCLSLAAKVEETQVPLLLDLQ--VEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFL 200
C+SLAAK+EE + P L + + V Y F I+RMELLVLSTL+W+M VTP +L
Sbjct: 161 ACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYL 220
Query: 201 DHIIRRL 207
+ RL
Sbjct: 221 PCLSSRL 227
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 95 AVEWVLKVNAHYGFSTLTAILAINYLDRFL--RSFHFQIDKPWMIQLLAVTCLSLAAKVE 152
A++W+L +GF TA +AI+Y D FL R Q D+ W ++LL+V CLSLAAK+E
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 153 ETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLG 208
E VP L + +VF+ I++ ELL+LSTL+WKM+ +TP + ++ + ++
Sbjct: 135 ERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKIS 189
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 113 AILAINYLDRFLRSFHFQIDK-PWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVF 171
A LA+NY+DR+L ++ PW +LLA++CL+LAAK++ D+Q G +++F
Sbjct: 79 AYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ-RGEEFMF 137
Query: 172 ETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFL----KRCERLLLT 227
+ IQRME +VL+ LEW+ VTP++FL + H L R LLL
Sbjct: 138 DEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSAC-FPQPRHPALLDAIKARAVDLLLR 196
Query: 228 LVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQLLGVLKISKEKVSDCYKLI 284
+ + + + PSV A A ++ +V + + ++ + ++ EK+ +C +++
Sbjct: 197 VQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLRECGEVM 253
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R A +W+++ + S T A N DRF+ WM++L+AVT LS+A+K
Sbjct: 78 RFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKF 137
Query: 152 EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKT 211
E PLL +L++EG ++F + +MEL++L LEW+++ VT +F ++ ++G+
Sbjct: 138 NEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGM-V 196
Query: 212 SLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATM 247
H + R LL ++ D + + Y PSV+ATA +
Sbjct: 197 GDHM-IMNRITNHLLDVICDLKMLQYPPSVVATAAI 231
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 107 GFSTLTAILAINYLDRFLR-SFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVE 165
G TA A NYLDRFL + H + ++ WM+++++V CLSLA K++E +P L DLQ+E
Sbjct: 100 GLEAATAFNAANYLDRFLSINCHLKWEE-WMVEVVSVGCLSLACKLDEVTIPSLHDLQME 158
Query: 166 GA-KYVFETKAIQRMELLVLSTLEWKMHPVTPISFL 200
A + F I+ MEL +L L W++ VTP SFL
Sbjct: 159 EAMGHSFRASTIRDMELTLLKALRWRLACVTPFSFL 194
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 54 DLFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTA 113
+L ++D L +L + EE+ L Q + D+ R W+L+V
Sbjct: 19 NLLYDDRVLHNLLTIEERYL-PQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQKCEEEVF 77
Query: 114 ILAINYLDRFL-----RSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAK 168
LA+NYLDRFL R H +QLL C+ LA+K++ET +PL +
Sbjct: 78 PLAMNYLDRFLAVVPTRKCH--------LQLLGAVCMFLASKLKET-IPLTAEKLCIYTD 128
Query: 169 YVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTL 228
+ + + EL+VL L+W + VTP F++HI+R+L L K + +
Sbjct: 129 NSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLVLIRKHAQTFIALC 188
Query: 229 VSDSRSVSYLPSVLATATM 247
+D Y PS++AT ++
Sbjct: 189 ATDFNFAMYPPSMIATGSV 207
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 52 EQDLFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTL 111
+ +L +D L +L + EE+ L Q + D+ R W+L+V
Sbjct: 17 DANLLHDDRVLQNLLTIEER-YLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEE 75
Query: 112 TAILAINYLDRFLRSFHFQIDKPWM-IQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYV 170
LAINYLDRFL + P +QLL C+ LA+K++ET +PL +
Sbjct: 76 VFPLAINYLDRFLAG----VPTPKTHLQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNS 130
Query: 171 FETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVS 230
+ + + EL+VL L+W + VTP F++HI+R+L + K + + +
Sbjct: 131 IKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCAT 190
Query: 231 DSRSVSYLPSVLATATMMHII 251
D + Y PS++AT ++ I
Sbjct: 191 DFKFAMYPPSMIATGSVGAAI 211
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 52 EQDLFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTL 111
+ +L +D L +L + EE+ L Q + D+ R W+L+V
Sbjct: 17 DANLLHDDRVLQNLLTIEER-YLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEE 75
Query: 112 TAILAINYLDRFLRSFHFQIDKPWM-IQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYV 170
LAINYLDRFL + P +QLL C+ LA+K++ET +PL +
Sbjct: 76 VFPLAINYLDRFLAG----VPTPKTHLQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNS 130
Query: 171 FETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVS 230
+ + + EL+VL L+W + VTP F++HI+R+L K + + +
Sbjct: 131 IKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNEKLSLIRKHAQTFIALCAT 190
Query: 231 DSRSVSYLPSVLATATM 247
D + Y PS++AT ++
Sbjct: 191 DFKFAMYPPSMIATGSV 207
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 15/239 (6%)
Query: 58 EDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAI 117
ED L +L + EE+ L Q + D+ R W+L+V LA+
Sbjct: 22 EDRVLQNLLTIEER-YLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAM 80
Query: 118 NYLDRFLRSFHFQIDKPWM-IQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAI 176
NYLDRFL + P +QLL C+ LA+K++ET +PL + + + +
Sbjct: 81 NYLDRFLAG----VPTPKTHLQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSVKPQEL 135
Query: 177 QRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVS 236
EL+VL L+W + VTP F++HI+R+L + K + + +D +
Sbjct: 136 LEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAM 195
Query: 237 YLPSVLATATMMHII---DQVEPVNPV--DYQNQLLGVLKISKEKVSDCYKLILELANA 290
Y PS++AT ++ I Q E VN + D +LL KI+ V DC K E A
Sbjct: 196 YPPSMIATGSVGAAICGLQQDEEVNALTCDALTELLT--KITHTDV-DCLKACQEQIEA 251
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 15/239 (6%)
Query: 58 EDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAI 117
ED L +L + EE+ L Q + D+ R W+L+V LA+
Sbjct: 22 EDRVLQNLLTIEER-YLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAM 80
Query: 118 NYLDRFLRSFHFQIDKPWM-IQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAI 176
NYLDRFL + P +QLL C+ LA+K++ET +PL + + + +
Sbjct: 81 NYLDRFLAG----VPTPKTHLQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSVKPQEL 135
Query: 177 QRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVS 236
EL+VL L+W + VTP F++HI+R+L + K + + +D +
Sbjct: 136 LEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAM 195
Query: 237 YLPSVLATATMMHII---DQVEPVNPV--DYQNQLLGVLKISKEKVSDCYKLILELANA 290
Y PS++AT ++ I Q + VN + D +LL KI+ V DC K E A
Sbjct: 196 YPPSMIATGSVGAAICGLQQDDEVNTLTCDALTELLA--KITHTDV-DCLKACQEQIEA 251
>sp|P24869|CG22_YEAST G2/mitotic-specific cyclin-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB2 PE=1 SV=1
Length = 491
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 61 ELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYL 120
E+++L KE+ L Q H ++ D+LV W++K++ +G T LAIN +
Sbjct: 241 EVITLPKKED---LYQHRNIH-QNRDILV-------NWLVKIHNKFGLLPETLYLAINIM 289
Query: 121 DRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRME 180
DRFL Q+DK +QL+ +CL +A+K EE P + E E + I+ E
Sbjct: 290 DRFLGKELVQLDK---LQLVGTSCLFIASKYEEVYSPSIKHFASETDGACTEDE-IKEGE 345
Query: 181 LLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPS 240
+L TL++ ++ P++FL RR+ + + LL + D R + LPS
Sbjct: 346 KFILKTLKFNLNYPNPMNFL----RRISKADDYDIQSRTLAKFLLEISLVDFRFIGILPS 401
Query: 241 VLATATMM 248
+ A A M
Sbjct: 402 LCAAAAMF 409
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 52 EQDLFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTL 111
+++L +D L +L + EE+ L Q + D+ R W+L+V
Sbjct: 17 DRNLLRDDRVLQNLLTIEER-YLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEE 75
Query: 112 TAILAINYLDRFLRSFHFQIDKPW-MIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYV 170
LA+NYLDRFL + P +QLL C+ LA+K++ET PL +
Sbjct: 76 VFPLAMNYLDRFLAG----VPTPKSHLQLLGAVCMFLASKLKETS-PLTAEKLCIYTDNS 130
Query: 171 FETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVS 230
+ + + EL+VL L+W + VTP F++HI+R+L + K + + +
Sbjct: 131 IKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCAT 190
Query: 231 DSRSVSYLPSVLATATMMHII 251
D + Y PS++AT ++ I
Sbjct: 191 DFKFAMYPPSMIATGSVGAAI 211
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 53 QDLFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLT 112
QD ++ +L K E+ L +++ R W+L+V
Sbjct: 18 QDSNLLNDRVLQTMLKAEENYLPSPNYFKCVQKEIVPKMRKIVATWMLEVCEEQKCEEEV 77
Query: 113 AILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFE 172
LA+NYLDRFL + K +QLL TC+ LA+K++ET VPL +
Sbjct: 78 FPLAMNYLDRFL---SVEPTKKTRLQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSVR 133
Query: 173 TKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDS 232
+ +MELL L+ L+W + VTP F++H + +L + S K + + +D
Sbjct: 134 PGELLQMELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDV 193
Query: 233 RSVSYLPSVLATATM 247
++ PS++A ++
Sbjct: 194 NFIASPPSMIAAGSV 208
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 86 DVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCL 145
++L R W+L+V LA+NYLDRFL F+ K +QLL TC+
Sbjct: 51 EILPYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLS---FEPLKKSRLQLLGATCM 107
Query: 146 SLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIR 205
+A+K++ET +PL + + +MELL+++ L+W + +TP F++H +
Sbjct: 108 FVASKMKET-IPLTAEKLCIYTDNSIRPDELLQMELLLVNKLKWNLAAMTPHDFIEHFLT 166
Query: 206 RLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHII 251
++ L K + + +D + +S PS++A +++ +
Sbjct: 167 KMPLAEDTKQIIRKHAQTFVALCATDVKFISNPPSMIAAGSVVAAV 212
>sp|P53782|CCND2_XENLA G1/S-specific cyclin-D2 OS=Xenopus laevis GN=ccnd2 PE=2 SV=1
Length = 291
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 55 LFWEDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAI 114
L +D L +L + EE+ L Q + D+ R W+L+V
Sbjct: 20 LLLDDRVLHNLLTVEER-YLPQCSYFKCVQKDIQPFMRRMVATWMLEVCEEQRCEEEVFP 78
Query: 115 LAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETK 174
+A+NYLDRFL + +QLL C+ LA+K++ET +PL + + +
Sbjct: 79 MAMNYLDRFLAVIP---TRKCHLQLLGAVCMFLASKLKET-IPLTAEKLCIYTDNSIKPQ 134
Query: 175 AIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRS 234
+ EL+VL L+W + VTP F++HI+R+L L K + + +D
Sbjct: 135 ELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLLLIRKHAQTFIALCATDFNF 194
Query: 235 VSYLPSVLATATM 247
Y PS++AT ++
Sbjct: 195 AMYPPSMIATGSV 207
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 57 WEDEELLSLFSKEEQQL------LKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFST 110
+ D L+ KE Q L + ++ H K S R+ ++W+++V+ +
Sbjct: 120 YTDSIFSHLYEKEIQMLPTHNYLMDTQSPYHLKSS-----MRALLIDWLVEVHEKFHCLP 174
Query: 111 LTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQ--VEGAK 168
T LAIN LDRFL +++K +QLL +TCL +A K EE ++P + + +GA
Sbjct: 175 ETLFLAINLLDRFLSQNVVKLNK---LQLLCITCLFIACKFEEVKLPKITNFAYVTDGAA 231
Query: 169 YVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTL 228
V + I++ EL VLS+L + + P++F IRR+ + E + ++
Sbjct: 232 TV---EGIRKAELFVLSSLGYNISLPNPLNF----IRRISKADNYCIETRNMAKFIMEYS 284
Query: 229 VSDSRSVSYLPSVLATATM 247
+ ++ + PS LA +M
Sbjct: 285 ICCNKFIHLKPSYLAAMSM 303
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 71 QQLLKQE-----TQTHYK--DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRF 123
Q +LK E + +++K ++L R W+L+V LA+NYLDRF
Sbjct: 27 QTMLKAEETSCPSMSYFKCVQKEILPNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRF 86
Query: 124 LRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLV 183
L + K W+ QLL TC+ LA+K++ET +PL + + MEL V
Sbjct: 87 LSVEPLR--KSWL-QLLGATCMFLASKMKET-IPLTAEKLCIYTDNSIRPDELLIMELRV 142
Query: 184 LSTLEWKMHPVTPISFLDHIIRRLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLA 243
L+ L+W + VTP F++H + ++ L K + + +D +S PS++A
Sbjct: 143 LNKLKWDLASVTPHDFIEHFLNKMPLTEDTKQIIRKHAQTFVALCATDVNFISNPPSMIA 202
Query: 244 TATM 247
++
Sbjct: 203 AGSV 206
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 85 SDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTC 144
S + RS ++W+++V Y S T LA+NY+DR+L +QLL VTC
Sbjct: 205 SSINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQN---LQLLGVTC 261
Query: 145 LSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQR----MELLVLSTLEWKMHPVTPISFL 200
+ +AAK EE VP QVE Y+ + ++ ME VL+ L++++ T FL
Sbjct: 262 MMIAAKYEEVCVP-----QVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFL 316
Query: 201 DHIIRRLGLKTSLHWEFLKRCERLLLTLVS--DSRSVSYLPSVLATATMMHIIDQVEPVN 258
+R + + L C LT +S D + Y PS++A + + + P
Sbjct: 317 RRFLRAAQGRKEVP-SLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTLHPSR 375
Query: 259 PVDYQNQLLGVLKISKEKVSDCYKLILELANAKTNAN-------SNPHKRKFEA 305
+ L + + C K +L+L N K +++ + HK KF A
Sbjct: 376 K-PWNATLEHYTSYRAKHMEACVKNLLQLCNEKLSSDVVAIRKKYSQHKYKFAA 428
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 83 KDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAV 142
K +D+ R+ ++W+++V+ Y T L+++Y+DRFL H + + +QL+
Sbjct: 189 KQTDINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLS--HMSVLR-GKLQLVGA 245
Query: 143 TCLSLAAKVEETQVPLLLDLQVEGAKYVFET------KAIQRMELLVLSTLEWKMHPVTP 196
C+ +AAK EE P E A++V+ T K + RME L+L TL + + T
Sbjct: 246 ACMLVAAKFEEIYPP-------EVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPTC 298
Query: 197 ISFLDHIIRRLGLKTSLHWEFLKRCERLL-LTLVSDSRSVSYLPSVLATATM 247
FL + K ++L E L LTL++ SV Y PS++A +++
Sbjct: 299 RDFLSRYLFAANAKPESQLKYL--AEYLSELTLINCDISVKYAPSMIAASSI 348
>sp|Q5E9K7|CCNE2_BOVIN G1/S-specific cyclin-E2 OS=Bos taurus GN=CCNE2 PE=2 SV=1
Length = 404
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 73 LLKQETQ-THYKDSDVLVV-----ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRS 126
+LK+ET+ H K +VL RS ++W+L+V Y T LA ++ DRF+ +
Sbjct: 117 MLKKETRYVHDKHFEVLHSELEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLT 176
Query: 127 FHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQ--VEGAKYVFETKAIQRMELLVL 184
I+K M+QL+ +T L +A+K+EE P L + +GA + I RMEL +L
Sbjct: 177 -QKDINKN-MLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGA---CSEEDILRMELAIL 231
Query: 185 STLEWKMHPVTPISFLDHIIRRLGLKTS--------LHWEFLKRCERL-LLTLVSDSRSV 235
L+W++ PVT IS+L+ ++ LK + +F++ + L L L DS
Sbjct: 232 KALKWELCPVTVISWLNLFLQVDALKDAPKVLLPQYSQEKFIQIAQLLDLCILAIDSLEF 291
Query: 236 SYLPSVLATATMMHI--IDQVEPVNPVDYQN 264
Y +LA A + H I+ V+ + +++ N
Sbjct: 292 QY--RILAAAALCHFTSIEVVKKASGLEWDN 320
>sp|Q14094|CCNI_HUMAN Cyclin-I OS=Homo sapiens GN=CCNI PE=1 SV=1
Length = 377
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 58 EDEELLSLFSK---EEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAI 114
E++ L L K E Q+ K + + +V R E ++W+ K+ + T
Sbjct: 8 ENQRLSFLLEKAITREAQMWKVNVRKMPSNQNVSPSQRDEVIQWLAKLKYQFNLYPETFA 67
Query: 115 LAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAK-VEETQVPLLLDLQVEGAKYVFET 173
LA + LDRFL + P + +A++C LAAK VEE + +L + + +
Sbjct: 68 LASSLLDRFLATVKAH---PKYLSCIAISCFFLAAKTVEEDERIPVLKVLARDSFCGCSS 124
Query: 174 KAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLKT 211
I RME ++L L W +H TP+ FL HI + + T
Sbjct: 125 SEILRMERIILDKLNWDLHTATPLDFL-HIFHAIAVST 161
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Query: 54 DLFW--EDEELLSLFSKEEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTL 111
DL W E L++ KE + + + + + SD+ RS ++W+L+V Y
Sbjct: 104 DLSWGCSKEVWLNMLKKESRYVHDKHFEVLH--SDLEPQMRSILLDWLLEVCEVYTLHRE 161
Query: 112 TAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQ--VEGAKY 169
T LA ++ DRF+ + I+K M+QL+ +T L +A+K+EE P L + +GA
Sbjct: 162 TFYLAQDFFDRFMLT-QKDINKN-MLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGA-- 217
Query: 170 VFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGLK 210
+ I RMEL++L L+W++ PVT IS+L+ ++ LK
Sbjct: 218 -CSEEDILRMELIILKALKWELCPVTIISWLNLFLQVDALK 257
>sp|P30283|CGS5_YEAST S-phase entry cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB5 PE=1 SV=1
Length = 435
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R+ V+W+++V+ + T L+IN +DRFL ++K +QLLAVT L +AAK
Sbjct: 198 RTILVDWLVEVHEKFQCYPETLFLSINLMDRFLAKNKVTMNK---LQLLAVTSLFIAAKF 254
Query: 152 EETQVPLLLDLQVEGAKYVFETKA------IQRMELLVLSTLEWKMHPVTPISFLDHIIR 205
EE +P L A+Y + T I+ E+ +L++LE+ + P++FL R
Sbjct: 255 EEVNLPKL-------AEYAYITDGAASKNDIKNAEMFMLTSLEFNIGWPNPLNFL----R 303
Query: 206 RLGLKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQ 265
R+ K + + + +L +LP +A M+I ++ N + N
Sbjct: 304 RIS-KADDYDPVNRNIGKFILEYAYCCHQFIHLPPSTVSAMAMYIARRMTNRNKNELWNG 362
Query: 266 LL-----GVLKISKEKV-SDCYKLILELANAKTNANS 296
L G+ I E S C L+ ++A++KT+ +S
Sbjct: 363 TLQHYSGGIDPIHDEAFQSLCIDLVKDIASSKTHLDS 399
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 83 KDSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAV 142
K D+ R+ V+W+++V Y T LA+NY+DRFL S K +QL+
Sbjct: 166 KQPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLVGT 222
Query: 143 TCLSLAAKVEETQVPLLLDLQVEGAKYVFET------KAIQRMELLVLSTLEWKMHPVTP 196
+ LA+K EE P E A++V+ T K + RME L+L L + + T
Sbjct: 223 AAMLLASKFEEIYPP-------EVAEFVYITDDTYNKKQVLRMEHLILKVLSFDLAAPTI 275
Query: 197 ISFLDHIIRRLGLKTSLHWEFLKRCERLL-----LTLVSDSRSVSYLPSVLATAT 246
FL LH + + E L LTL+ + YLPSV+A A
Sbjct: 276 NQFLTQYF--------LHQQTNAKVESLSMYLGELTLIDADPYLKYLPSVIAAAA 322
>sp|Q5E9I1|CCNG1_BOVIN Cyclin-G1 OS=Bos taurus GN=CCNG1 PE=2 SV=1
Length = 295
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R V+ +L + +GF T T LA+N LDRFL Q P + + ++C LA K
Sbjct: 52 RDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQ---PKHLGCVGLSCFYLAVKS 108
Query: 152 --EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLG- 208
EE VPL DL + ++Y F + RME +VL + WK+ T FL L
Sbjct: 109 TEEERNVPLATDL-IRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQE 167
Query: 209 -----LKTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATM------MHIIDQVEPV 257
K+SL++E L+ + + S++ PSVLA + + I+ E V
Sbjct: 168 NVPHERKSSLNFERLEAQLKACYCRIIFSKAK---PSVLALSIIALEIQAQKYIELTEGV 224
Query: 258 NPVDYQNQLLGV-LKISKEKVSDCYKLILELANAKTNANSNPHKRKFEAI 306
+ +++ G L +E VS C LA +N + P+ +K + I
Sbjct: 225 ERLQKHSKISGRDLTFWQELVSKC------LAEYSSNKCAKPNVQKLKWI 268
>sp|P24868|CG21_YEAST G2/mitotic-specific cyclin-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB1 PE=1 SV=1
Length = 471
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R V W++K++ +G T LAIN +DRFL Q+++ +QL+ +CL +A+K
Sbjct: 241 RDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNR---LQLVGTSCLFIASKY 297
Query: 152 EETQVPLL--LDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGL 209
EE P + + +GA V + K +R +L L++++ P++FL RR+
Sbjct: 298 EEIYSPSIKHFAYETDGACSVEDIKEGER---FILEKLDFQISFANPMNFL----RRISK 350
Query: 210 KTSLHWEFLKRCERLLLTLVSDSRSVSYLPSVLATATMM 248
+ + L+ + D + + LPS+ A+A M
Sbjct: 351 ADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMF 389
>sp|Q9Z2V9|CCNI_MOUSE Cyclin-I OS=Mus musculus GN=Ccni PE=2 SV=4
Length = 377
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 58 EDEELLSLFSK---EEQQLLKQETQTHYKDSDVLVVARSEAVEWVLKVNAHYGFSTLTAI 114
E++ L SL + E Q+ K + +V R E ++W+ K+ + T
Sbjct: 8 ENQRLSSLLERAISREAQMWKVNVPKIPTNQNVSPSQRDEVIQWLAKLKYQFNLYPETFA 67
Query: 115 LAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAK-VEETQVPLLLDLQVEGAKYVFET 173
LA + LDRFL + P + +A++C LAAK VEE + +L + + +
Sbjct: 68 LASSLLDRFLATVKAH---PKYLNCIAISCFFLAAKTVEEDEKIPVLKVLARDSFCGCSS 124
Query: 174 KAIQRMELLVLSTLEWKMHPVTPISFLDHIIRRLGL 209
I RME ++L L W +H TP+ FL HI + +
Sbjct: 125 SEILRMERIILDKLNWDLHTATPLDFL-HIFHAIAV 159
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 33/286 (11%)
Query: 50 LLEQDLFWEDEELLSLFSKEEQQLLKQ-ETQTHYK-------DSDVLVVARSEAVEWVLK 101
+ + D +ED +L + + + L++ ET+ H DV R+ ++W+++
Sbjct: 207 ICDVDNNYEDPQLCATLASDIYMHLREAETRKHPSTDFMETLQKDVNPSMRAILIDWLVE 266
Query: 102 VNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLD 161
V Y T L +NY+DR+L + +QLL V C+ +AAK +E P
Sbjct: 267 VAEEYRLVPDTLYLTVNYIDRYLSGNEINRQR---LQLLGVACMLIAAKYKEICAP---- 319
Query: 162 LQVEGAKYVFETKAIQ----RMELLVLSTLEWKMHPVTPISFLDHIIRRLGLK---TSLH 214
QVE Y+ + + ME VL+ L+++M T FL +R + +LH
Sbjct: 320 -QVEEFCYITDNTYFRDEVLEMEASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALH 378
Query: 215 WEFLKRCERLLLTLVSDSRSVSYLPSVLATATMMHIIDQVEPVNPVDYQNQLLGVLKISK 274
EFL L L + +SY PS++A + + ++P + + L +
Sbjct: 379 LEFLANYVAELSLL--EYNLLSYPPSLVAASAIFLAKFILQPAK-HPWNSTLAHYTQYKS 435
Query: 275 EKVSDCYKLILELANAKTNAN-------SNPHKRKFEAIPGSPGGV 313
++SDC K + L +N HK KF A P +
Sbjct: 436 SELSDCVKALHRLFCVGPGSNLPAIREKYTQHKYKFVAKKPCPPSI 481
>sp|Q5R5D0|CCNG1_PONAB Cyclin-G1 OS=Pongo abelii GN=CCNG1 PE=2 SV=1
Length = 295
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R V+ +L + +GF T T LA+N LDRFL Q P + + ++C LA K
Sbjct: 52 RDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQ---PKHLGCVGLSCFYLAVKS 108
Query: 152 --EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLD 201
EE VPL DL + ++Y F + RME +VL + WK+ T FL
Sbjct: 109 IEEERNVPLATDL-IRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQ 159
>sp|P51959|CCNG1_HUMAN Cyclin-G1 OS=Homo sapiens GN=CCNG1 PE=1 SV=2
Length = 295
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R V+ +L + +GF T T LA+N LDRFL Q P + + ++C LA K
Sbjct: 52 RDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQ---PKHLGCVGLSCFYLAVKS 108
Query: 152 --EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLD 201
EE VPL DL + ++Y F + RME +VL + WK+ T FL
Sbjct: 109 IEEERNVPLATDL-IRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQ 159
>sp|Q52QT8|CCNG1_PIG Cyclin-G1 OS=Sus scrofa GN=CCNG1 PE=2 SV=1
Length = 295
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 92 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKV 151
R V+ +L + +GF T T LA+N LDRFL Q P + + ++C LA K
Sbjct: 52 RDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQ---PKHLGCVGLSCFYLAVKS 108
Query: 152 --EETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWKMHPVTPISFLD 201
EE VPL DL + ++Y F + RME +VL + WK+ T FL
Sbjct: 109 LEEERNVPLATDL-IRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQ 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,103,017
Number of Sequences: 539616
Number of extensions: 5599408
Number of successful extensions: 20773
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 20487
Number of HSP's gapped (non-prelim): 255
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)