Query 017250
Match_columns 375
No_of_seqs 312 out of 2334
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:24:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iuq_A Glycerol-3-phosphate ac 99.8 5.3E-20 1.8E-24 175.8 3.5 203 129-362 95-342 (367)
2 3ry0_A Putative tautomerase; o 19.3 94 0.0032 20.9 3.2 34 328-366 3-36 (65)
3 1otf_A 4-oxalocrotonate tautom 19.1 86 0.0029 20.5 3.0 22 344-365 14-35 (62)
4 3m21_A Probable tautomerase HP 17.9 1.1E+02 0.0037 20.7 3.3 22 344-365 17-38 (67)
5 2opa_A Probable tautomerase YW 17.4 1.1E+02 0.0038 19.9 3.2 33 328-365 3-35 (61)
6 2x4k_A 4-oxalocrotonate tautom 16.2 1.1E+02 0.0039 19.7 3.1 22 344-365 17-38 (63)
7 3mb2_A 4-oxalocrotonate tautom 14.7 1.4E+02 0.0047 20.6 3.2 33 328-365 4-36 (72)
8 3m20_A 4-oxalocrotonate tautom 14.6 1.1E+02 0.0039 20.3 2.7 24 343-366 12-35 (62)
9 3abf_A 4-oxalocrotonate tautom 13.2 1.6E+02 0.0056 19.2 3.2 22 344-365 15-36 (64)
10 3ej9_A Alpha-subunit of trans- 11.8 1.8E+02 0.0063 20.3 3.2 34 328-366 4-37 (76)
No 1
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=99.77 E-value=5.3e-20 Score=175.80 Aligned_cols=203 Identities=16% Similarity=0.134 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHhCeEEEEEeeeecchhhhhhhhhhccCCccccccccCCCCCCCeEEEecCCccchhhhhcccc---
Q 017250 129 VVTGRFLSRVMLFVLGFYWITETFRILDVQEKSENEAKNQSKDEDEAKDQDEESGRPGAIISNHVSYLDILYHMSSS--- 205 (375)
Q Consensus 129 ~~~~~~~~r~~l~~~G~~~i~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vivsNH~S~lD~l~l~~~~--- 205 (375)
+.+++.|.|.++...|. +|.|.... .++ .+..+.++++|++|||+|.+|++++....
T Consensus 95 y~~~~~~ir~li~~~~s---~V~G~e~~--------~~~---------~E~l~~~~~vIfisNHQS~~D~~vi~~~l~~~ 154 (367)
T 1iuq_A 95 YIFGQNYIRPLIDFGNS---FVGNLSLF--------KDI---------EEKLQQGHNVVLISNHQTEADPAIISLLLEKT 154 (367)
T ss_dssp HHHHHHHHGGGBCGGGC---EEECHHHH--------HHH---------HHHHHTTCEEEEEECCCCTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhcCC---Eeecchhh--------hhH---------HhhccCCCcEEEEECCccchhHHHHHHHHhhc
Confidence 45677778877777776 46664432 010 11234668999999999999999887765
Q ss_pred ------CceEEEccccccccHHHHHH--HhcCceEE----e------cCCCccchhhhHHHHHHHHHHHHhCCCCCeEEE
Q 017250 206 ------FPSFVAKRSVAKLPLVGLIS--KCLGCVYV----Q------RESKSSDFKGVSGVVTERVREAHRDKSAPMMML 267 (375)
Q Consensus 206 ------~~~fvak~~l~~~p~~g~~~--~~~g~i~v----~------R~~~~~~~~~~~~~~~~~l~~~~~~~~g~~v~I 267 (375)
..+||||+++...|+...+. +.++||+. + |.+.+.+.+.+ .++.+.+++ .|..|+|
T Consensus 155 ~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl-~~~~~~Lk~-----GG~sI~I 228 (367)
T 1iuq_A 155 NPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSL-KEMALLLRG-----GSQLIWI 228 (367)
T ss_dssp CHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHH-HHHHHHHHH-----CCCEEEE
T ss_pred ccccccceEEEeehhhhcCccccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHH-HHHHHHHHc-----CCeEEEE
Confidence 46999999999777663321 44567776 3 32221122211 122222222 2568999
Q ss_pred ee-CcccCC----CC--ccccccccc----c----CCCC--EEEEEEECCCCCCCCC-ccCcchhhHHHHHhhcCccEEE
Q 017250 268 FP-GTTTNG----DY--LLPFKTGAF----L----ARAP--VLPVILRYPYQRFSPA-WDSISGARHVFFLLCQFVNHIE 329 (375)
Q Consensus 268 FP-GT~sn~----~~--ll~Fk~Gaf----~----~~~p--V~PV~i~y~~~~~~~~-w~~~~~~~~l~~~l~~~~~~v~ 329 (375)
|| |||+++ +. ..+||+|+| . +++| |+||+|. ++..+++. -.. ..+..-....++.|.
T Consensus 229 FPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp~~ve----~~~g~~r~i~~~~V~ 303 (367)
T 1iuq_A 229 APSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPPPSQVE----IEIGEKRVIAFNGAG 303 (367)
T ss_dssp CTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC--------------CCCCCBCCE
T ss_pred eCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCCccccc----ccccccceeecccEE
Confidence 99 999995 34 455999998 3 8999 9999999 66655431 000 000000012357899
Q ss_pred EEEcCccCCCCCC------CCCHHHHHHHHHHHHHHHhC
Q 017250 330 VTSLPVYHPSQQE------KDDPKLYAENVRRLMASEVW 362 (375)
Q Consensus 330 V~~lppi~p~~~~------~~~~~~la~~vr~~ma~~l~ 362 (375)
|.+++||++++.. +++.+.+++.|++.|++.++
T Consensus 304 v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~ 342 (367)
T 1iuq_A 304 LSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYN 342 (367)
T ss_dssp EEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCccchhhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976532 22345799999999988774
No 2
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=19.28 E-value=94 Score=20.87 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=25.2
Q ss_pred EEEEEcCccCCCCCCCCCHHHHHHHHHHHHHHHhCCCcc
Q 017250 328 IEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSF 366 (375)
Q Consensus 328 v~V~~lppi~p~~~~~~~~~~la~~vr~~ma~~l~~~~~ 366 (375)
++|.+.+. ...+..+++++.+.+.+.+.+|++..
T Consensus 3 i~I~~~~G-----rs~eqk~~L~~~it~~~~~~lg~p~~ 36 (65)
T 3ry0_A 3 IRVTLLEG-----RSPQEVAALGEALTAAAHETLGTPVE 36 (65)
T ss_dssp EEEEEESC-----CCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEcCC-----CCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 55665553 22356789999999999999999743
No 3
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=19.12 E-value=86 Score=20.50 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHHHHHhCCCc
Q 017250 344 DDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 344 ~~~~~la~~vr~~ma~~l~~~~ 365 (375)
+..+.+++.+.+.+.+.+|++.
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~ 35 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPL 35 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHhCcCc
Confidence 5678999999999999999974
No 4
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=17.91 E-value=1.1e+02 Score=20.72 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHHHHHhCCCc
Q 017250 344 DDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 344 ~~~~~la~~vr~~ma~~l~~~~ 365 (375)
+..+++++.+.+.+++.+|++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~ 38 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNK 38 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHHHHCcCc
Confidence 5678999999999999999974
No 5
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=17.39 E-value=1.1e+02 Score=19.85 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=24.2
Q ss_pred EEEEEcCccCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 017250 328 IEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 328 v~V~~lppi~p~~~~~~~~~~la~~vr~~ma~~l~~~~ 365 (375)
++|.+.+.. ..+..+.+++.+.+.+.+.+|++.
T Consensus 3 i~i~~~~gr-----s~eqk~~l~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 3 VTVKMLEGR-----TDEQKRNLVEKVTEAVKETTGASE 35 (61)
T ss_dssp EEEEEESCC-----CHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred EEEEEcCCC-----CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 455554432 235678899999999999999974
No 6
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=16.24 E-value=1.1e+02 Score=19.73 Aligned_cols=22 Identities=9% Similarity=0.031 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHHHHHHhCCCc
Q 017250 344 DDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 344 ~~~~~la~~vr~~ma~~l~~~~ 365 (375)
+..+.+++.+.+.+++.+|++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~ 38 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANR 38 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHHHhCcCc
Confidence 4578899999999999999974
No 7
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=14.70 E-value=1.4e+02 Score=20.55 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=24.9
Q ss_pred EEEEEcCccCCCCCCCCCHHHHHHHHHHHHHHHhCCCc
Q 017250 328 IEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 328 v~V~~lppi~p~~~~~~~~~~la~~vr~~ma~~l~~~~ 365 (375)
|+|++.+.. ..+..+.+++.+.+.+++.+|++.
T Consensus 4 I~I~~~~gr-----s~eqK~~L~~~it~~l~~~lg~p~ 36 (72)
T 3mb2_A 4 LRITMLEGR-----STEQKAELARALSAAAAAAFDVPL 36 (72)
T ss_dssp EEEEEESCC-----CHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEEcCCC-----CHHHHHHHHHHHHHHHHHHhCCCc
Confidence 556655532 235678999999999999999974
No 8
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=14.57 E-value=1.1e+02 Score=20.28 Aligned_cols=24 Identities=8% Similarity=0.066 Sum_probs=20.3
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCcc
Q 017250 343 KDDPKLYAENVRRLMASEVWISSF 366 (375)
Q Consensus 343 ~~~~~~la~~vr~~ma~~l~~~~~ 366 (375)
.+..+.+++.+-+.+++.+|++..
T Consensus 12 ~eqK~~L~~~it~~~~~~lg~~~~ 35 (62)
T 3m20_A 12 VGKKREFVERLTSVAAEIYGMDRS 35 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHhCcCcc
Confidence 356789999999999999999743
No 9
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=13.19 E-value=1.6e+02 Score=19.22 Aligned_cols=22 Identities=0% Similarity=-0.011 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHHHhCCCc
Q 017250 344 DDPKLYAENVRRLMASEVWISS 365 (375)
Q Consensus 344 ~~~~~la~~vr~~ma~~l~~~~ 365 (375)
+..+.+++.+-+.+++.+|++.
T Consensus 15 eqk~~l~~~lt~~l~~~lg~~~ 36 (64)
T 3abf_A 15 EKKRELVRRLTEMASRLLGEPY 36 (64)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 4578899999999999999864
No 10
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=11.76 E-value=1.8e+02 Score=20.25 Aligned_cols=34 Identities=6% Similarity=0.018 Sum_probs=25.2
Q ss_pred EEEEEcCccCCCCCCCCCHHHHHHHHHHHHHHHhCCCcc
Q 017250 328 IEVTSLPVYHPSQQEKDDPKLYAENVRRLMASEVWISSF 366 (375)
Q Consensus 328 v~V~~lppi~p~~~~~~~~~~la~~vr~~ma~~l~~~~~ 366 (375)
|+|.+.+. ...+..+.+++.+.+.+.+.+|++..
T Consensus 4 I~I~~~~G-----rs~eqK~~L~~~it~~l~~~lg~p~~ 37 (76)
T 3ej9_A 4 ISCDMRYG-----RTDEQKRALSAGLLRVISEATGEPRE 37 (76)
T ss_dssp EEEEEETT-----CCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEcCC-----CCHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 55665543 22356789999999999999999743
Done!