Query 017253
Match_columns 374
No_of_seqs 163 out of 728
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:26:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jhn_A Calnexin; jelly-roll, b 100.0 1E-127 5E-132 960.6 24.9 342 11-353 18-420 (424)
2 3rg0_A Calreticulin; beta-sand 100.0 2E-124 7E-129 913.8 23.2 317 14-364 2-322 (332)
3 3pow_A Calreticulin; legume le 100.0 3.2E-95 1.1E-99 693.3 20.2 255 11-363 4-262 (265)
4 1hhn_A Calreticulin; molecular 100.0 1.6E-40 5.3E-45 277.0 6.8 101 203-304 1-101 (101)
5 1hhn_A Calreticulin; molecular 99.9 1.6E-26 5.6E-31 192.6 7.0 85 191-287 8-98 (101)
6 1jhn_A Calnexin; jelly-roll, b 99.9 1.1E-25 3.9E-30 225.7 8.8 109 190-298 253-378 (424)
7 3rg0_A Calreticulin; beta-sand 99.5 4.4E-15 1.5E-19 145.3 3.6 63 190-288 197-259 (332)
8 3ici_C Calnexin, PP90; protein 99.4 1.1E-13 3.8E-18 96.4 3.5 34 236-269 5-38 (38)
9 3ici_C Calnexin, PP90; protein 98.3 4.3E-07 1.5E-11 63.3 3.1 30 216-245 3-38 (38)
10 4b1m_A Levanase; hydrolase, CB 77.5 24 0.00081 30.8 11.1 92 86-190 63-155 (185)
11 3zyp_A CIP1; metal binding pro 46.6 1.1E+02 0.0036 27.1 9.4 77 22-102 3-80 (218)
12 4azz_A Levanase; hydrolase; 1. 45.0 6.5 0.00022 33.5 0.0 92 86-191 42-135 (172)
13 2v73_A CBM40, putative EXO-alp 30.2 74 0.0025 28.8 5.5 105 74-195 28-135 (191)
14 2quo_A Heat-labIle enterotoxin 26.5 50 0.0017 27.1 3.3 24 105-131 101-124 (126)
15 2kbg_A N-CAM 2, neural cell ad 24.8 98 0.0033 24.8 4.9 61 122-185 20-82 (114)
16 2oka_A Hypothetical protein; P 24.4 58 0.002 26.7 3.4 22 170-191 40-61 (104)
17 2p0g_A Selenoprotein W-related 23.9 59 0.002 26.8 3.4 23 169-191 37-59 (105)
18 2ojl_A Hypothetical protein; B 22.6 66 0.0023 26.7 3.4 23 169-191 42-64 (108)
19 3dex_A SAV_2001; alpha-beta pr 22.0 66 0.0023 26.7 3.3 31 162-193 40-70 (107)
No 1
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=1.4e-127 Score=960.55 Aligned_cols=342 Identities=38% Similarity=0.765 Sum_probs=305.9
Q ss_pred HhhccceeeeeeccCCCccCCCeEecccccCC------CCCCcEEEeccccCCCCCCcceeeccccchhhhhccCCC-CC
Q 017253 11 FFQISVSEIFFEERFDDGWRSRWVISDWKRSE------GKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FS 83 (374)
Q Consensus 11 ~~~~~~~~v~F~E~F~~~~~~rWv~S~~~k~~------~~~G~~~~~~g~~~~~~~d~GL~~~~~ak~yaIs~~l~~-~~ 83 (374)
...++++++||+|+|+++|++|||+|++++++ .|.|+|.+++|++++.++|+||||+++|||||||++|++ |+
T Consensus 18 ~~p~~~~~~~F~E~F~~~~~~rWv~S~~~k~~~~~~~~~y~G~w~~~~~~~~~~~~DkGL~~~~~ar~yaISa~~~kpf~ 97 (424)
T 1jhn_A 18 KAPVPSGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFL 97 (424)
T ss_dssp CCCCCCSCCSSEECCCSSSCCSCCCCCCC-----------CCEEECCBCTTCSSTTCBCCEEECSSCCCEEEEEEEEEEC
T ss_pred ecCCCCcceeEeeecCCCccCCceeCcccccccccccccCCeEEEEecCccCCCccccceeeccchhHHHHHHhhcCccc
Confidence 34566899999999999999999999998763 367999999999999999999999999999999999997 99
Q ss_pred CCCCceEEEEEEeeeceeeccCceEEecccc--ccccccCCCCCeeEEEcccccCCCCceEEEEEeecCCc-------cc
Q 017253 84 NKNRTLVVQYSIRFEQDIECGGGYIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN-------YP 154 (374)
Q Consensus 84 ~~~k~LVvQYeVk~q~~i~CGGaYiKLl~~~--~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~~~~~-------~~ 154 (374)
+++|+||||||||||++|+|||||||||+.. +++++|+++|||+||||||+|| .++||||||||+|.+ |.
T Consensus 98 ~~~k~LVvQYeVk~q~~idCGGaYiKLl~~~~~~d~~~f~~~TpY~IMFGPD~CG-~~~kvH~I~~~knp~~g~~~ekh~ 176 (424)
T 1jhn_A 98 FDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHA 176 (424)
T ss_dssp SSSSCEEEEEEECCTTCCSEEECCEEEEBCCSSCCGGGCCSSCCEEEEEEEEEES-SCCEEEEEEEEECTTTCCEEEECC
T ss_pred cCCCCEEEEEEEEecccccccceEEEeecCcccCCHhHcCCCCCceEeccCCccC-CCCeEEEEEecCCCCCCchhhhcc
Confidence 9999999999999999999999999999974 7999999999999999999999 799999999998754 55
Q ss_pred cccCC---ccccCCccceEEEEEcCCCceEEEEcCeeeccCCccCCCC--CCCCccccCCCCCCCCCCCCCCccCCCCCC
Q 017253 155 IKKEL---ECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWD--ILPPRKIKAVNAKKPADWDDREYIDDPNAV 229 (374)
Q Consensus 155 ~~~~~---~~~~D~~tHlYTLii~pdntyei~IDg~~~~~gsl~~dw~--~~~p~~I~Dp~d~KP~DW~d~~~I~Dp~~~ 229 (374)
.++++ +|++|++||||||||+|||||+|+|||+++.+|||++||+ ++||++|+||+|+||+||+++++|+||+|+
T Consensus 177 ~~~~~~~~~~~~D~~tHlYTLIl~pdntyei~ID~~~v~~GsL~~D~~Pp~~pp~~I~Dp~~~KP~DWde~~~I~Dp~a~ 256 (424)
T 1jhn_A 177 KRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAV 256 (424)
T ss_dssp CCCSSCCTHHHHSCSCEEEEEEEETTTEEEEEETTEEEEEEC-------CCSSCCCCBCTTCCCCTTCCCCSEEECSSCC
T ss_pred cCCcccccccccCCCceEEEEEEcCCCcEEEEECCceecccccHHhccccCCCcccccCccccCccccccccccCCcccC
Confidence 55554 3568999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCC-------------------CCCCCCCCC
Q 017253 230 KPEGYDS--------------------IPKEIPDPKAKKPDNWDEDEDGLWK-------------------PPKIPNPAY 270 (374)
Q Consensus 230 KP~dWDd--------------------~p~~IpDP~a~kP~dWd~~~dG~We-------------------~p~I~NP~y 270 (374)
||+|||+ +|++|+||+|+||+|||++++|+|+ ||||+||+|
T Consensus 257 KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~I~NP~y 336 (424)
T 1jhn_A 257 KPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPNY 336 (424)
T ss_dssp CCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCEEECTTC
T ss_pred CccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCCCCCccc
Confidence 9999974 4779999999999999998887776 477778888
Q ss_pred CccCccCcCCCCCCCcccccCccCCCCCCCCCCCCCcCCceeEeEEEEeecCCceeceEEecCCHHHHHHHHHHhhcc-h
Q 017253 271 KGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPAYAKQVVEEVLSN-R 349 (374)
Q Consensus 271 kG~W~p~~I~NP~ykG~W~~~~I~NP~Y~~d~~~~~~~~i~~vG~elW~~~~g~~FDNili~~d~~~A~~~~~~t~~~-~ 349 (374)
+|+|+||+|+||+|+|+|+||+|+||+|++|.++++|.+|++||||||||++|++|||||||+|+++|++++++||.. +
T Consensus 337 kG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~iG~ElW~~~~g~~FDNilItdd~~~A~~~~~~t~~~k~ 416 (424)
T 1jhn_A 337 KGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDWANDGWGLKK 416 (424)
T ss_dssp CCSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEEEEECCCCSSSCCBCEEEEEESSSHHHHHHHHHTTTC--
T ss_pred cCcccCCccCCCcccccccccccCCccccCCCcccccCcccEEEEEeEEeeCCcEEeeEEEcCCHHHHHHHHHhhhhhhh
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred hHHH
Q 017253 350 EIEK 353 (374)
Q Consensus 350 ~~E~ 353 (374)
.+|.
T Consensus 417 ~~e~ 420 (424)
T 1jhn_A 417 AADG 420 (424)
T ss_dssp ----
T ss_pred hhhh
Confidence 7764
No 2
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=100.00 E-value=1.9e-124 Score=913.76 Aligned_cols=317 Identities=46% Similarity=0.913 Sum_probs=274.2
Q ss_pred ccceeeeeeccCCC--ccCCCeEecccccCCCCCCcEEEeccccCCC-CCCcceeeccccchhhhhccCCCCCCCCCceE
Q 017253 14 ISVSEIFFEERFDD--GWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-PDDKGIQTHTDARHYAISAKIPEFSNKNRTLV 90 (374)
Q Consensus 14 ~~~~~v~F~E~F~~--~~~~rWv~S~~~k~~~~~G~~~~~~g~~~~~-~~d~GL~~~~~ak~yaIs~~l~~~~~~~k~LV 90 (374)
.++++|||+|+|++ +|++|||+|++++ ..|+|.+++|+++++ ++|+||||+++|||||||++|++|+|++|+||
T Consensus 2 ~~~~~vyF~E~F~d~~~w~~rWv~S~~~~---~~G~w~~~~g~~~~~~~~DkGL~t~~~ak~yAISakf~pf~n~~k~LV 78 (332)
T 3rg0_A 2 SMDPAIYFKEQFLDGDAWTNRWVESKHKS---DFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKFEPFSNKGQTLV 78 (332)
T ss_dssp --CCCEEEEECCCSGGGGGGTEEECCSSS---SCCCEEEECCSSCSSTTTTCEEEECSSSEEEEEEEEEEEECCTTSCEE
T ss_pred CcceEEEEEeecCCCCcccCCceeCCCcc---cCCeEEeecCcccCCcccccceeecchhhhhhhhcccCCccCCCCCEE
Confidence 35789999999997 5999999999864 369999999999988 46999999999999999999944999999999
Q ss_pred EEEEEeeeceeeccCceEEeccccccccccCCCCCeeEEEcccccCCCCceEEEEEeecCCccccccCCccccCCccceE
Q 017253 91 VQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFY 170 (374)
Q Consensus 91 vQYeVk~q~~i~CGGaYiKLl~~~~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~~~~~~~~~~~~~~~~D~~tHlY 170 (374)
||||||||++|+|||||||||+.++++++|+++|||+||||||+||++++||||||||++++|+++++++|++|++||||
T Consensus 79 vQYeVK~e~~idCGGaYiKLl~~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvH~I~~~k~~~h~~kk~i~~~~D~~THLY 158 (332)
T 3rg0_A 79 VQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLY 158 (332)
T ss_dssp EEEEEEETTCCSEEECCEEEECSSCCGGGCCTTSCCSEEEEEEEETTTEEEEEEEEEETTEEEECSSCCBCCCSSSEEEE
T ss_pred EEEEEEcccccccCceEEEeecCcCCHhhcCCCCcceEEecCcccCCCCCEEEEEEEeCCccccccCCCCCCCCCCCceE
Confidence 99999999999999999999999999999999999999999999997799999999999999999999999999999999
Q ss_pred EEEEcCCCceEEEEcCeeeccCCccCCCCCCCCccccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017253 171 TFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPD 250 (374)
Q Consensus 171 TLii~pdntyei~IDg~~~~~gsl~~dw~~~~p~~I~Dp~d~KP~DW~d~~~I~Dp~~~KP~dWDd~p~~IpDP~a~kP~ 250 (374)
||||+|||||||+|||+++.+|||++||+++||++|+||+|+||+||+|+++|+||+|+||+|||+
T Consensus 159 TLIi~pdntyeI~ID~~~v~~GsL~~Dwd~~ppk~I~Dp~d~KPedWdd~~~I~DP~a~KPeDWd~-------------- 224 (332)
T 3rg0_A 159 TLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-------------- 224 (332)
T ss_dssp EEEECTTSEEEEEETTEEEEEEEHHHHSCCSCCSEEECTTCCCCTTCCCCCCCC--------------------------
T ss_pred EEEEcCCCeEEEEECCEEEecccccCCCCcCCccccCCcccCCcccCcCcccCCCcccCCcccccc--------------
Confidence 999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCccCcCCCCCCCcccccCccCCCCCCCCCCCCCcCCceeEeEEEEeecCCceeceEE
Q 017253 251 NWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNIL 330 (374)
Q Consensus 251 dWd~~~dG~We~p~I~NP~ykG~W~p~~I~NP~ykG~W~~~~I~NP~Y~~d~~~~~~~~i~~vG~elW~~~~g~~FDNil 330 (374)
|+|||+|+||+|+||+|+|+|+||+|+||+|++|++++++.+|++||||||||++|++|||||
T Consensus 225 -----------------p~YkG~Wkp~~I~NP~YkG~W~p~~I~NP~Y~~D~~~~~~~~i~~iG~ElWq~~sg~iFDNil 287 (332)
T 3rg0_A 225 -----------------GGSGGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFL 287 (332)
T ss_dssp ---------------------------------CCCCCCCCEEECTTCCCCTTTTCCSCEEEEEEEEEESSCCEEEEEEE
T ss_pred -----------------ccccccccccccCCCcccCCccCCccCCCCCcCCcchhccccccEEEEEEEeccCCcEEeeEE
Confidence 349999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHHhhcc-hhHHHhhhHHHHhhhh
Q 017253 331 ICDDPAYAKQVVEEVLSN-REIEKEGFEEAEKVRK 364 (374)
Q Consensus 331 i~~d~~~A~~~~~~t~~~-~~~E~~~~~~~~~~~~ 364 (374)
||+|+++|++++++||.+ +.+|++++++++++++
T Consensus 288 Itdd~~~A~~~~~~t~~~~~~~Ek~~~~~~~~~~~ 322 (332)
T 3rg0_A 288 ITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQR 322 (332)
T ss_dssp EESCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHhhhhhhHHHHHHHHHHhHHHh
Confidence 999999999999999999 9999988876554443
No 3
>3pow_A Calreticulin; legume lectin fold, CNX/CRT family, multi-functional, carboh binding, peptide binding, multi-compartmental, chaperone; 1.55A {Homo sapiens} PDB: 3pos_A 3o0w_A* 3o0v_A* 3o0x_A*
Probab=100.00 E-value=3.2e-95 Score=693.29 Aligned_cols=255 Identities=44% Similarity=0.868 Sum_probs=232.6
Q ss_pred HhhccceeeeeeccCCC--ccCCCeEecccccCCCCCCcEEEeccccCCC-CCCcceeeccccchhhhhccCCCCCCCCC
Q 017253 11 FFQISVSEIFFEERFDD--GWRSRWVISDWKRSEGKAGYFKHTAGKWHGD-PDDKGIQTHTDARHYAISAKIPEFSNKNR 87 (374)
Q Consensus 11 ~~~~~~~~v~F~E~F~~--~~~~rWv~S~~~k~~~~~G~~~~~~g~~~~~-~~d~GL~~~~~ak~yaIs~~l~~~~~~~k 87 (374)
.|++++++|||.|+|++ +|++|||+|++++ ..|+|++++|+++++ ++|+||||+++|||||||++|++|++++|
T Consensus 4 ~~~~~~~~v~F~E~Fdd~~~w~~rWv~S~~kk---~~G~w~~~~g~~~~~~~~DkGL~t~~~Ak~yaISakl~pf~~~~k 80 (265)
T 3pow_A 4 SIEGREPAVYFKEQFLDGDGWTSRWIESKHKS---DFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQ 80 (265)
T ss_dssp ---CCCCSEEEEECCCSGGGGGGTEEECCSSS---CCCCEEEECCSSCSCTTTTCEEEECSSSEEEEEEEEEEEECCTTS
T ss_pred ceeeeeeeEEEEeecCCCCcccCCeeeCCCcC---cCCeEEeecccccCCcccccceeecchhhhhhhhcccCCccCCCC
Confidence 46788999999999996 6999999999875 369999999999988 56999999999999999999933999999
Q ss_pred ceEEEEEEeeeceeeccCceEEeccccccccccCCCCCeeEEEcccccCCCCceEEEEEeecCCccccccCCccccCCcc
Q 017253 88 TLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLT 167 (374)
Q Consensus 88 ~LVvQYeVk~q~~i~CGGaYiKLl~~~~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~~~~~~~~~~~~~~~~D~~t 167 (374)
+||||||||||++|+|||||||||+.++++++|+++|||+||||||+||++++||||||||++++|+++++++|++|++|
T Consensus 81 ~LVvQYeVk~q~~idCGGaYiKLl~~~~~~~~f~~~tpY~IMFGPD~CG~~~~kvHfI~~~k~~~h~~~~~~~~~~D~~t 160 (265)
T 3pow_A 81 TLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFT 160 (265)
T ss_dssp CEEEEEEEECTTCCSEEECCEEEECTTCCGGGCCTTSCCSEEEEEEEESTTCEEEEEEEEETTEEEECSSCCBCCCSSSE
T ss_pred CEEEEEEEEeccccccCceEEEeecCCCCHhhcCCCCCceEEecCcccCCCCCEEEEEEEcCCccccccCCCCCCCCCCC
Confidence 99999999999999999999999999899999999999999999999997799999999999999999999999999999
Q ss_pred ceEEEEEcCCCceEEEEcCeeeccCCccCCCCCCCCccccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCC
Q 017253 168 HFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAK 247 (374)
Q Consensus 168 HlYTLii~pdntyei~IDg~~~~~gsl~~dw~~~~p~~I~Dp~d~KP~DW~d~~~I~Dp~~~KP~dWDd~p~~IpDP~a~ 247 (374)
|||||||+|||||||+|||+++.+|||++||+++||
T Consensus 161 HLYTLIi~pdntyeI~ID~~~v~~GsL~~d~df~Pp-------------------------------------------- 196 (265)
T 3pow_A 161 HLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPG-------------------------------------------- 196 (265)
T ss_dssp EEEEEEECTTSEEEEEETTEEEEEEEHHHHSCC-----------------------------------------------
T ss_pred ceEEEEEcCCCeEEEEECCEEeeeccccCccccCCC--------------------------------------------
Confidence 999999999999999999999999999999999886
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccCccCcCCCCCCCcccccCccCCCCCCCCCCCCCcCCceeEeEEEEeecCCceec
Q 017253 248 KPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYD 327 (374)
Q Consensus 248 kP~dWd~~~dG~We~p~I~NP~ykG~W~p~~I~NP~ykG~W~~~~I~NP~Y~~d~~~~~~~~i~~vG~elW~~~~g~~FD 327 (374)
.+|+.+|++.+|++||||||||+||+|||
T Consensus 197 ---------------------------------------------------~~d~~ly~~~~i~~vGldlWQvksGtiFD 225 (265)
T 3pow_A 197 ---------------------------------------------------SGDPSIYAYDNFGVLGLDLWQVKSGTIFD 225 (265)
T ss_dssp -------------------------------------------------------CTTCCSCEEEEEEEEEESSCCCEEE
T ss_pred ---------------------------------------------------CCCccccccccccEEEEEEEEecCCeEec
Confidence 23455788899999999999999999999
Q ss_pred eEEecCCHHHHHHHHHHhhcc-hhHHHhhhHHHHhhh
Q 017253 328 NILICDDPAYAKQVVEEVLSN-REIEKEGFEEAEKVR 363 (374)
Q Consensus 328 Nili~~d~~~A~~~~~~t~~~-~~~E~~~~~~~~~~~ 363 (374)
|||||||+++|++++++||+. +++|+++++++++++
T Consensus 226 NiLITDd~~~A~~~~eetw~~~k~~Ek~~~~~~~~~~ 262 (265)
T 3pow_A 226 NFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQ 262 (265)
T ss_dssp EEEEESCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cEEecCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999887665443
No 4
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=100.00 E-value=1.6e-40 Score=276.98 Aligned_cols=101 Identities=56% Similarity=1.201 Sum_probs=98.2
Q ss_pred CccccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCccCcCCCC
Q 017253 203 PRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPKRIKNP 282 (374)
Q Consensus 203 p~~I~Dp~d~KP~DW~d~~~I~Dp~~~KP~dWDd~p~~IpDP~a~kP~dWd~~~dG~We~p~I~NP~ykG~W~p~~I~NP 282 (374)
|++|+||+++||+||+++++|+||+|+||+|||+ +++|+||+|+||++||++++|+|++|||+||+|+|+|+|++|+||
T Consensus 1 p~~I~Dp~~~KPeDWd~~~~I~DP~a~KPeDWde-~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~ykG~W~pp~I~NP 79 (101)
T 1hhn_A 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNP 79 (101)
T ss_dssp CCSBCCSTTCCCSCCSTTSEECCSSCCCCSTTCC-CSEEECTTCCCCTTCCHHHHSSCCCCEEECTTCCSSCCCCCEECS
T ss_pred CcccCCcccCCccccccccccCCcccCCccCccc-cccCCCcccCCccccCcccCCcccCCcCCCccCcCcccCCccCCC
Confidence 6899999999999999999999999999999998 889999999999999999999999999999999999999999999
Q ss_pred CCCcccccCccCCCCCCCCCCC
Q 017253 283 NYKGKWKIPYIDNPEFEDDPDL 304 (374)
Q Consensus 283 ~ykG~W~~~~I~NP~Y~~d~~~ 304 (374)
+|+|.|+|++|+||+|++|.++
T Consensus 80 ~Ykg~W~p~~I~NP~y~~d~~~ 101 (101)
T 1hhn_A 80 DYKGTWIHPEIDNPEYSPDANI 101 (101)
T ss_dssp SCCCCCCCCCBCCTTCCSSSCC
T ss_pred CCCCCccCCccCCCCccCCCCC
Confidence 9999999999999999998753
No 5
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=99.93 E-value=1.6e-26 Score=192.58 Aligned_cols=85 Identities=45% Similarity=0.839 Sum_probs=79.8
Q ss_pred cCCccCCCCCCCCccccCCCCCCCCCCCCCCccCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017253 191 SGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDS------IPKEIPDPKAKKPDNWDEDEDGLWKPPK 264 (374)
Q Consensus 191 ~gsl~~dw~~~~p~~I~Dp~d~KP~DW~d~~~I~Dp~~~KP~dWDd------~p~~IpDP~a~kP~dWd~~~dG~We~p~ 264 (374)
+.++++||+. +++|+||+++||+||+++++|+||+++||+||++ +++||+||.++ |+|+++|
T Consensus 8 ~~~KPeDWd~--~~~I~DP~a~KPeDWde~~~I~dP~~~kP~dWd~~~~G~W~~p~I~NP~yk----------G~W~pp~ 75 (101)
T 1hhn_A 8 DAAKPEDWDE--RAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYK----------GEWKPRQ 75 (101)
T ss_dssp TTCCCSCCST--TSEECCSSCCCCSTTCCCSEEECTTCCCCTTCCHHHHSSCCCCEEECTTCC----------SSCCCCC
T ss_pred ccCCcccccc--ccccCCcccCCccCccccccCCCcccCCccccCcccCCcccCCcCCCccCc----------CcccCCc
Confidence 4568999997 6899999999999999999999999999999997 48899999887 9999999
Q ss_pred CCCCCCCccCccCcCCCCCCCcc
Q 017253 265 IPNPAYKGPWRPKRIKNPNYKGK 287 (374)
Q Consensus 265 I~NP~ykG~W~p~~I~NP~ykG~ 287 (374)
|+||+|+|.|+|++|+||+|+|.
T Consensus 76 I~NP~Ykg~W~p~~I~NP~y~~d 98 (101)
T 1hhn_A 76 IDNPDYKGTWIHPEIDNPEYSPD 98 (101)
T ss_dssp EECSSCCCCCCCCCBCCTTCCSS
T ss_pred cCCCCCCCCccCCccCCCCccCC
Confidence 99999999999999999999986
No 6
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=99.92 E-value=1.1e-25 Score=225.66 Aligned_cols=109 Identities=35% Similarity=0.673 Sum_probs=99.3
Q ss_pred ccCCccCCCCCCCCccccCCCCCCCCCCCCCC--ccCCCCCCCCCCCCC------CCCCCCCCCCC---------CCCCC
Q 017253 190 DSGSMYTDWDILPPRKIKAVNAKKPADWDDRE--YIDDPNAVKPEGYDS------IPKEIPDPKAK---------KPDNW 252 (374)
Q Consensus 190 ~~gsl~~dw~~~~p~~I~Dp~d~KP~DW~d~~--~I~Dp~~~KP~dWDd------~p~~IpDP~a~---------kP~dW 252 (374)
....+++||+..+|++|+||++.||+||++.+ +|+||+++||+|||+ ++++|+||.|+ .|..+
T Consensus 253 p~a~KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~I~ 332 (424)
T 1jhn_A 253 PDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMID 332 (424)
T ss_dssp SSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCEEE
T ss_pred cccCCccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCCCC
Confidence 35679999999999999999999999998765 999999999999998 38999999998 69999
Q ss_pred CCCCCCCCCCCCCCCCCCCccCccCcCCCCCCCcccccCccCCCCC
Q 017253 253 DEDEDGLWKPPKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEF 298 (374)
Q Consensus 253 d~~~dG~We~p~I~NP~ykG~W~p~~I~NP~ykG~W~~~~I~NP~Y 298 (374)
|..+.|+|+||+|+||+|+|.|+|++|+||+|+|.+.+..+.+=.+
T Consensus 333 NP~ykG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~ 378 (424)
T 1jhn_A 333 NPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSA 378 (424)
T ss_dssp CTTCCCSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEE
T ss_pred CccccCcccCCccCCCcccccccccccCCccccCCCcccccCcccE
Confidence 9999999999999999999999999999999999988877654333
No 7
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=99.51 E-value=4.4e-15 Score=145.31 Aligned_cols=63 Identities=40% Similarity=0.769 Sum_probs=30.3
Q ss_pred ccCCccCCCCCCCCccccCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017253 190 DSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA 269 (374)
Q Consensus 190 ~~gsl~~dw~~~~p~~I~Dp~d~KP~DW~d~~~I~Dp~~~KP~dWDd~p~~IpDP~a~kP~dWd~~~dG~We~p~I~NP~ 269 (374)
.+..+++||+. +++|+||+++||+||++++ + .|+|+||+|+||+
T Consensus 197 p~d~KPedWdd--~~~I~DP~a~KPeDWd~p~------------Y----------------------kG~Wkp~~I~NP~ 240 (332)
T 3rg0_A 197 PDAAKPEDWDE--RAKIDDPTDSKPEDWDKGG------------S----------------------GGEWKPRQIDNPD 240 (332)
T ss_dssp TTCCCCTTCCC--CCCCC--------------------------------------------------------------
T ss_pred cccCCcccCcC--cccCCCcccCCcccccccc------------c----------------------cccccccccCCCc
Confidence 34458999987 7899999999999999754 3 2999999999999
Q ss_pred CCccCccCcCCCCCCCccc
Q 017253 270 YKGPWRPKRIKNPNYKGKW 288 (374)
Q Consensus 270 ykG~W~p~~I~NP~ykG~W 288 (374)
|+|.|+||+|+||+|..+=
T Consensus 241 YkG~W~p~~I~NP~Y~~D~ 259 (332)
T 3rg0_A 241 YKGTWIHPEIDNPEYSPDA 259 (332)
T ss_dssp CCCCCCCCEEECTTCCCCT
T ss_pred ccCCccCCccCCCCCcCCc
Confidence 9999999999999999763
No 8
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=99.40 E-value=1.1e-13 Score=96.37 Aligned_cols=34 Identities=62% Similarity=1.235 Sum_probs=31.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 017253 236 SIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA 269 (374)
Q Consensus 236 d~p~~IpDP~a~kP~dWd~~~dG~We~p~I~NP~ 269 (374)
++|++|+||+|+||+|||+++||+|+||||+||+
T Consensus 5 dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 5 DEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred cccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 3589999999999999999999999999999995
No 9
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=98.27 E-value=4.3e-07 Score=63.27 Aligned_cols=30 Identities=33% Similarity=0.705 Sum_probs=22.6
Q ss_pred CCCCCCccCCCCCCCCCCCCC------CCCCCCCCC
Q 017253 216 DWDDREYIDDPNAVKPEGYDS------IPKEIPDPK 245 (374)
Q Consensus 216 DW~d~~~I~Dp~~~KP~dWDd------~p~~IpDP~ 245 (374)
.++++++|+||+++||+|||+ ++++|+||.
T Consensus 3 ~~dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 3 HMDEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred cccccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 355667788888888888876 489999984
No 10
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=77.50 E-value=24 Score=30.82 Aligned_cols=92 Identities=10% Similarity=0.094 Sum_probs=47.4
Q ss_pred CCceEEEEEEeeeceeeccCceEEeccccccccccCCCCCeeEEEcccccCCCCceEEEEEeec-CCccccccCCccccC
Q 017253 86 NRTLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQ-GQNYPIKKELECETD 164 (374)
Q Consensus 86 ~k~LVvQYeVk~q~~i~CGGaYiKLl~~~~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~~-~~~~~~~~~~~~~~D 164 (374)
-.+++|+-+||...+-.+|-+-|- |....+ ...-|.+.+.|.- +++.+ .+.. +....+...+.....
T Consensus 63 ~~Df~le~dvk~~~~~~~g~~Gi~-fR~~~d-----~~~gY~~~i~~~~-----~~~~l-~k~~~g~~~~L~~~~~~~~~ 130 (185)
T 4b1m_A 63 GSDFTYESDITIKDGNGRGAGALM-FRSDKD-----AKNGYLANVDAKH-----DLVKF-FKFENGAASVIAEYKTPIDV 130 (185)
T ss_dssp ESSEEEEEEEEEEEEEEEEEEEEE-EEECTT-----SSSEEEEEEETTT-----TEEEE-EEEETTEEEEEEEEECCCCS
T ss_pred ccCEEEEEEEEEcCCCCcceEEEE-EEEcCC-----CCCcEEEEEECCC-----CEEEE-EEEeCCcEEEeeeccccCCC
Confidence 367999999999765211212232 222111 1245888888742 34433 3432 322223221112222
Q ss_pred CccceEEEEEcCCCceEEEEcCeeec
Q 017253 165 KLTHFYTFILRPDASYSILIDNRERD 190 (374)
Q Consensus 165 ~~tHlYTLii~pdntyei~IDg~~~~ 190 (374)
...|-+++++. .++.+++|||+.+.
T Consensus 131 g~w~~l~I~~~-G~~i~~~vnG~~v~ 155 (185)
T 4b1m_A 131 NKKYHLKTEAE-GDRFKIYLDDRLVI 155 (185)
T ss_dssp SCCEEEEEEEE-TTEEEEEETTEEEE
T ss_pred CCeEEEEEEEE-CCEEEEEECCEEEE
Confidence 34444444444 67999999998754
No 11
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=46.57 E-value=1.1e+02 Score=27.12 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=46.3
Q ss_pred eccCCCc-cCCCeEecccccCCCCCCcEEEeccccCCCCCCcceeeccccchhhhhccCCCCCCCCCceEEEEEEeeece
Q 017253 22 EERFDDG-WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYSIRFEQD 100 (374)
Q Consensus 22 ~E~F~~~-~~~rWv~S~~~k~~~~~G~~~~~~g~~~~~~~d~GL~~~~~ak~yaIs~~l~~~~~~~k~LVvQYeVk~q~~ 100 (374)
.|.|..+ +..+|...... ..-.|...+..... ..+.+.|.++..+.-|.-...+.........+-+.|=||+...
T Consensus 3 sddFEsg~~~~~W~~~~~~--~~g~g~v~vdt~~a--~sG~~slrvt~~~~~~~~~~~~~~~~~~~~~~y~r~~v~~~~~ 78 (218)
T 3zyp_A 3 SDDFESGWDQTKWPISAPD--CNQGGTVSLDTTVA--HSGSNSMKVVGGPNGYCGHIFFGTTQVPTGDVYVRAWIRLQTA 78 (218)
T ss_dssp EECSTTCCCTTTSCEECSS--CCCSCEEEEESSSC--SSSSCEEEEECCSSGGGGCEEEEECCCCSSSEEEEEEEEESSC
T ss_pred ccccccCCCCCCceecCCC--CCCccEEEEccccc--cCCceEEEEEccCCCccceEEeecccCCCceEEEEEEEEeccc
Confidence 5789888 46889875421 12247777766643 3456888876655433322222223344566889999998766
Q ss_pred ee
Q 017253 101 IE 102 (374)
Q Consensus 101 i~ 102 (374)
+.
T Consensus 79 ~~ 80 (218)
T 3zyp_A 79 LG 80 (218)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 12
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=44.95 E-value=6.5 Score=33.47 Aligned_cols=92 Identities=12% Similarity=0.162 Sum_probs=43.0
Q ss_pred CCceEEEEEEeeeceeeccCceEEeccccccccccCCCCCeeEEEcccccCCCCceEEEEEee-cCCccccccCCccccC
Q 017253 86 NRTLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSY-QGQNYPIKKELECETD 164 (374)
Q Consensus 86 ~k~LVvQYeVk~q~~i~CGGaYiKLl~~~~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~-~~~~~~~~~~~~~~~D 164 (374)
..+++++.+||+..+-.+|.+=|-+-.. .|. ..-|.+.+.|.. +++.+ .+. .+....+........
T Consensus 42 ~~df~le~~v~~~~~~~~~~~Gi~fR~~-~d~-----~~~Y~~~i~~~~-----~~~~l-~~~~~G~~~~l~~~~~~~~- 108 (172)
T 4azz_A 42 GSDFTYESDITIKDGNGRGAGALMFRSD-KDA-----KNGYLANVDAKH-----DLVKF-FKFENGAASVIAEYKTPID- 108 (172)
Confidence 4668888888876541133333332211 111 235777776642 23332 222 222222221111111
Q ss_pred CccceEEEEEcC-CCceEEEEcCeeecc
Q 017253 165 KLTHFYTFILRP-DASYSILIDNRERDS 191 (374)
Q Consensus 165 ~~tHlYTLii~p-dntyei~IDg~~~~~ 191 (374)
...=|+|-|.- .++.+++|||+.+.+
T Consensus 109 -~g~w~~l~I~~~G~~i~~~vnG~~v~~ 135 (172)
T 4azz_A 109 -VNKKYHLKTEAEGDRFKIYLDDRLVID 135 (172)
Confidence 22335554443 568899999976554
No 13
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=30.23 E-value=74 Score=28.83 Aligned_cols=105 Identities=11% Similarity=0.178 Sum_probs=64.8
Q ss_pred hhhccCCCCCC-CCCceEEEEEEeeeceeeccCceEEeccccccccccCCCCCeeEEEcccccCCCCceEEEEEeecC--
Q 017253 74 AISAKIPEFSN-KNRTLVVQYSIRFEQDIECGGGYIKLLSAYVNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQG-- 150 (374)
Q Consensus 74 aIs~~l~~~~~-~~k~LVvQYeVk~q~~i~CGGaYiKLl~~~~d~~~f~~~tpY~IMFGPD~CG~~~~kvH~I~~~~~-- 150 (374)
-||..|+++.+ ..-+++|-| |... .+..-||+-+.+- .+ .-|--||=- +.++-+.+|-++
T Consensus 28 d~s~~l~~lk~L~~gTI~v~f--ks~~-----~~~q~LfSIsN~k-~~---n~yf~lyi~------~g~lg~e~R~~~~~ 90 (191)
T 2v73_A 28 NITGDLEKFSSLEEGTIVTRF--NMND-----TSIQSLIGLSDGN-KA---NNYFSLYVS------GGKVGYELRRQEGN 90 (191)
T ss_dssp ECGGGGGGTTTCSSEEEEEEE--EECC-----CSCEEEEEEECTT-CS---SCEEEEEEC------SSEEEEEEEECTTS
T ss_pred chhhhhHHhcCcCCcEEEEEE--ecCC-----CcceEEEEccCCC-Cc---cceEEEEEe------CCEEEEEEecCCCc
Confidence 57777877444 334566555 3332 3444788764322 22 236555522 347777787753
Q ss_pred CccccccCCccccCCccceEEEEEcCCCceEEEEcCeeeccCCcc
Q 017253 151 QNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMY 195 (374)
Q Consensus 151 ~~~~~~~~~~~~~D~~tHlYTLii~pdntyei~IDg~~~~~gsl~ 195 (374)
.+|....+.....+...|--|+.+..+.+|.|++||+.|.+..+.
T Consensus 91 ~~~~~~~~a~v~~~~~wntvaf~~d~~~~~~ly~NG~~V~t~~~~ 135 (191)
T 2v73_A 91 GDFNVHHSADVTFNRGINTLALKIEKGIGAKIFLNGSLVKTVSDP 135 (191)
T ss_dssp SCEEEEEEEECCCCSSCEEEEEEEETTTEEEEEETTEEEEEEECT
T ss_pred eeeeeecccceecCCceEEEEEEEcCCccEEEEECCEEEEEEecc
Confidence 244444444444544677779999888899999999999887554
No 14
>2quo_A Heat-labIle enterotoxin B chain; beta sandwich, claudin-4 binding domain, therapeutic agent; 1.75A {Clostridium perfringens}
Probab=26.46 E-value=50 Score=27.14 Aligned_cols=24 Identities=33% Similarity=0.855 Sum_probs=16.8
Q ss_pred CceEEeccccccccccCCCCCeeEEEc
Q 017253 105 GGYIKLLSAYVNQKKFGGDAPYSLMFG 131 (374)
Q Consensus 105 GaYiKLl~~~~d~~~f~~~tpY~IMFG 131 (374)
|.|+-++.+. ..+++.-||+|+|-
T Consensus 101 gqyvlvmkan---ssysgnypysilfq 124 (126)
T 2quo_A 101 GQYVLVMKAN---SSYSGNYPYSILFQ 124 (126)
T ss_dssp EEEEEEEEES---SCCSSCBCCEEEEE
T ss_pred CcEEEEEecc---CcccCCCCceEeee
Confidence 5566555442 46888899999994
No 15
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=24.83 E-value=98 Score=24.81 Aligned_cols=61 Identities=15% Similarity=0.154 Sum_probs=36.5
Q ss_pred CCCCeeEEEcccccCCCCceEEEEEeecCCcc-ccccCCccccCCccceEEEE-EcCCCceEEEEc
Q 017253 122 GDAPYSLMFGPDICGTQKKHLHVILSYQGQNY-PIKKELECETDKLTHFYTFI-LRPDASYSILID 185 (374)
Q Consensus 122 ~~tpY~IMFGPD~CG~~~~kvH~I~~~~~~~~-~~~~~~~~~~D~~tHlYTLi-i~pdntyei~ID 185 (374)
..+-++|..-|-.-| ..-..++++.|+.... .+..... ....+.-|+|. |.|+..|++||=
T Consensus 20 ~~~sv~L~W~p~~dg-gsPI~~Y~I~yr~~~~~~w~~~~~--~~~~~~~~~l~~L~p~t~Y~frV~ 82 (114)
T 2kbg_A 20 SGKSFKLSITKQDDG-GAPILEYIVKYRSKDKEDQWLEKK--VQGNKDHIILEHLQWTMGYEVQIT 82 (114)
T ss_dssp STTCEEEEECCCCCS-SSCCSEEEEEEEESSCCSCCEEEE--EETTTCCEEECCCCTTCCEEEEEE
T ss_pred CCCEEEEEEECCCCC-CCcccEEEEEEEeCCCCCcEEeEE--cCCCcCEEEEcCCCCCCEEEEEEE
Confidence 444577777775555 5567788888864321 1111111 11223458884 899999999983
No 16
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=24.37 E-value=58 Score=26.74 Aligned_cols=22 Identities=9% Similarity=-0.021 Sum_probs=18.5
Q ss_pred EEEEEcCCCceEEEEcCeeecc
Q 017253 170 YTFILRPDASYSILIDNRERDS 191 (374)
Q Consensus 170 YTLii~pdntyei~IDg~~~~~ 191 (374)
.+|+.-..+.|||.|||+.|-+
T Consensus 40 v~l~P~~~G~FEV~vng~lV~S 61 (104)
T 2oka_A 40 VCLEPGTGGVFRITCDGVQVWE 61 (104)
T ss_dssp EEEEEECTTCEEEEETTEEEEE
T ss_pred EEEEeCCCceEEEEECCEEEEE
Confidence 5777777899999999998864
No 17
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=23.91 E-value=59 Score=26.76 Aligned_cols=23 Identities=4% Similarity=0.110 Sum_probs=18.6
Q ss_pred eEEEEEcCCCceEEEEcCeeecc
Q 017253 169 FYTFILRPDASYSILIDNRERDS 191 (374)
Q Consensus 169 lYTLii~pdntyei~IDg~~~~~ 191 (374)
-.+|+.-..+.|||.|||+.|-+
T Consensus 37 ~v~l~P~~~G~FEV~vng~lV~S 59 (105)
T 2p0g_A 37 YVALHPDTGGRFEIFCNGVQIWE 59 (105)
T ss_dssp EEEEEEESTTCEEEEETTEEEEE
T ss_pred eEEEEeCCCceEEEEECCEEEEE
Confidence 35677767899999999998864
No 18
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=22.58 E-value=66 Score=26.69 Aligned_cols=23 Identities=4% Similarity=-0.026 Sum_probs=18.8
Q ss_pred eEEEEEcCCCceEEEEcCeeecc
Q 017253 169 FYTFILRPDASYSILIDNRERDS 191 (374)
Q Consensus 169 lYTLii~pdntyei~IDg~~~~~ 191 (374)
=.+|+.-..+.|+|.|||+.|-+
T Consensus 42 eV~L~P~~~G~FeV~vng~lVws 64 (108)
T 2ojl_A 42 EVALVPGTGGVFRIHYNGAPLWD 64 (108)
T ss_dssp EEEEEEECTTCEEEEETTEEEEE
T ss_pred eEEEEeCCCceEEEEECCEEEEE
Confidence 34677777899999999998864
No 19
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=21.98 E-value=66 Score=26.66 Aligned_cols=31 Identities=10% Similarity=0.073 Sum_probs=22.7
Q ss_pred ccCCccceEEEEEcCCCceEEEEcCeeeccCC
Q 017253 162 ETDKLTHFYTFILRPDASYSILIDNRERDSGS 193 (374)
Q Consensus 162 ~~D~~tHlYTLii~pdntyei~IDg~~~~~gs 193 (374)
+.+.+.- .+|+-...+.|+|.|||+.|-+-.
T Consensus 40 F~~~l~e-VsL~Pg~gG~FeV~vdg~lVwsRk 70 (107)
T 3dex_A 40 FETELTE-LALKPGTGGVFVVRVDDEVVWDRR 70 (107)
T ss_dssp STTTEEE-EEEEEESSSCEEEEETTEEEEEHH
T ss_pred cccccce-EEEEeCCCceEEEEECCEEEEEec
Confidence 3344433 478877789999999999887654
Done!