Query 017257
Match_columns 374
No_of_seqs 321 out of 1656
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 06:59:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017257.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017257hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 1.9E-99 4E-104 769.8 25.6 372 1-374 223-598 (598)
2 PLN02222 phosphoinositide phos 100.0 3.1E-97 7E-102 752.6 26.7 369 1-374 212-581 (581)
3 KOG0169 Phosphoinositide-speci 100.0 2.2E-96 5E-101 745.4 21.3 345 1-374 397-744 (746)
4 PLN02952 phosphoinositide phos 100.0 8E-93 1.7E-97 722.5 26.5 365 1-374 232-599 (599)
5 PLN02228 Phosphoinositide phos 100.0 4.3E-92 9.4E-97 713.3 25.9 346 1-374 215-561 (567)
6 PLN02223 phosphoinositide phos 100.0 1.1E-87 2.5E-92 671.9 23.5 318 1-374 216-537 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 2.9E-73 6.3E-78 576.3 15.7 254 102-373 560-822 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 2.2E-68 4.8E-73 536.4 13.8 257 102-373 926-1188(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 2.4E-54 5.3E-59 397.4 6.8 148 1-213 110-258 (258)
10 cd08630 PI-PLCc_delta3 Catalyt 100.0 9.3E-54 2E-58 394.7 6.7 147 1-213 110-258 (258)
11 cd08631 PI-PLCc_delta4 Catalyt 100.0 5.1E-53 1.1E-57 389.2 6.7 147 1-213 110-258 (258)
12 cd08595 PI-PLCc_zeta Catalytic 100.0 8.7E-53 1.9E-57 387.5 6.9 146 1-213 110-257 (257)
13 cd08597 PI-PLCc_PRIP_metazoa C 100.0 9.3E-53 2E-57 389.5 6.9 150 1-213 110-260 (260)
14 cd08624 PI-PLCc_beta2 Catalyti 100.0 2.6E-52 5.7E-57 385.1 8.0 144 1-213 113-261 (261)
15 smart00149 PLCYc Phospholipase 100.0 1.9E-52 4.2E-57 342.4 4.9 115 110-225 1-115 (115)
16 PF00387 PI-PLC-Y: Phosphatidy 100.0 4.1E-53 8.9E-58 349.0 -0.3 118 108-226 1-118 (118)
17 cd08633 PI-PLCc_eta2 Catalytic 100.0 5.8E-52 1.3E-56 380.3 6.9 143 1-213 110-254 (254)
18 cd08593 PI-PLCc_delta Catalyti 100.0 5.2E-52 1.1E-56 383.9 6.4 147 1-213 110-257 (257)
19 cd08632 PI-PLCc_eta1 Catalytic 100.0 1.9E-51 4.1E-56 376.2 6.3 142 1-213 110-253 (253)
20 cd08596 PI-PLCc_epsilon Cataly 100.0 2.2E-51 4.8E-56 377.6 5.7 140 1-213 110-254 (254)
21 cd08628 PI-PLCc_gamma2 Catalyt 100.0 2.1E-51 4.5E-56 378.3 5.1 142 1-213 110-254 (254)
22 cd08625 PI-PLCc_beta3 Catalyti 100.0 5.2E-51 1.1E-55 377.9 7.6 141 1-213 113-258 (258)
23 cd08623 PI-PLCc_beta1 Catalyti 100.0 6.3E-51 1.4E-55 375.4 6.6 141 1-213 113-258 (258)
24 cd08626 PI-PLCc_beta4 Catalyti 100.0 1.2E-50 2.5E-55 373.4 5.9 141 1-213 112-257 (257)
25 cd08591 PI-PLCc_beta Catalytic 100.0 2.2E-50 4.7E-55 371.6 6.5 141 1-213 112-257 (257)
26 cd08592 PI-PLCc_gamma Catalyti 100.0 3.4E-46 7.4E-51 338.9 6.1 118 1-213 110-229 (229)
27 cd08594 PI-PLCc_eta Catalytic 100.0 6.7E-46 1.4E-50 335.6 6.0 116 1-213 110-227 (227)
28 cd08558 PI-PLCc_eukaryota Cata 100.0 4.2E-45 9.1E-50 331.6 7.0 116 1-213 110-226 (226)
29 cd08598 PI-PLC1c_yeast Catalyt 100.0 6E-45 1.3E-49 331.6 6.7 120 1-212 110-230 (231)
30 cd08627 PI-PLCc_gamma1 Catalyt 100.0 7.6E-45 1.6E-49 328.7 6.6 117 1-212 110-228 (229)
31 cd08599 PI-PLCc_plant Catalyti 100.0 7.8E-45 1.7E-49 330.6 6.1 117 1-213 110-228 (228)
32 cd00137 PI-PLCc Catalytic doma 99.9 1.5E-28 3.3E-33 233.2 5.4 143 1-213 116-274 (274)
33 cd00275 C2_PLC_like C2 domain 99.9 5.5E-21 1.2E-25 160.7 15.4 125 245-374 2-128 (128)
34 cd08395 C2C_Munc13 C2 domain t 99.8 3.7E-19 8E-24 148.6 12.5 103 246-355 1-111 (120)
35 cd04036 C2_cPLA2 C2 domain pre 99.8 1.2E-17 2.7E-22 139.0 13.1 113 247-373 2-117 (119)
36 cd08682 C2_Rab11-FIP_classI C2 99.7 1.6E-17 3.5E-22 139.8 12.9 115 247-372 1-126 (126)
37 cd04042 C2A_MCTP_PRT C2 domain 99.7 4.4E-17 9.4E-22 136.1 14.4 116 246-373 1-119 (121)
38 cd04016 C2_Tollip C2 domain pr 99.7 8.5E-17 1.9E-21 134.6 14.5 115 245-373 2-121 (121)
39 cd08381 C2B_PI3K_class_II C2 d 99.7 3E-17 6.4E-22 137.7 11.6 97 245-348 13-112 (122)
40 cd08677 C2A_Synaptotagmin-13 C 99.7 2.2E-17 4.8E-22 136.7 10.0 98 244-351 13-114 (118)
41 cd04019 C2C_MCTP_PRT_plant C2 99.7 1.3E-16 2.8E-21 138.6 13.9 117 246-373 1-131 (150)
42 cd04015 C2_plant_PLD C2 domain 99.7 2E-16 4.4E-21 138.5 15.0 124 245-374 7-158 (158)
43 cd08379 C2D_MCTP_PRT_plant C2 99.7 1.4E-16 3E-21 134.2 12.7 114 246-368 1-124 (126)
44 cd04022 C2A_MCTP_PRT_plant C2 99.7 1.6E-16 3.5E-21 133.9 12.7 117 246-373 1-125 (127)
45 cd04029 C2A_SLP-4_5 C2 domain 99.7 1.2E-16 2.7E-21 134.5 11.6 106 244-354 14-124 (125)
46 cd08406 C2B_Synaptotagmin-12 C 99.7 4.9E-17 1.1E-21 138.9 8.7 110 245-360 15-127 (136)
47 cd04010 C2B_RasA3 C2 domain se 99.7 1.8E-16 4E-21 137.2 12.0 108 246-361 1-127 (148)
48 cd08377 C2C_MCTP_PRT C2 domain 99.7 5.7E-16 1.2E-20 128.6 14.6 117 246-374 2-119 (119)
49 cd04039 C2_PSD C2 domain prese 99.7 2.2E-16 4.7E-21 129.6 11.0 97 246-349 2-99 (108)
50 cd04033 C2_NEDD4_NEDD4L C2 dom 99.7 4.8E-16 1.1E-20 131.7 13.6 122 246-374 1-133 (133)
51 cd04028 C2B_RIM1alpha C2 domai 99.7 5.8E-16 1.3E-20 133.5 13.4 107 245-357 29-139 (146)
52 cd08392 C2A_SLP-3 C2 domain fi 99.7 3.1E-16 6.8E-21 132.6 11.4 97 245-347 15-114 (128)
53 cd08393 C2A_SLP-1_2 C2 domain 99.7 1.7E-16 3.7E-21 133.5 9.5 98 245-348 15-115 (125)
54 cd08378 C2B_MCTP_PRT_plant C2 99.7 6E-16 1.3E-20 129.6 12.7 110 247-373 2-119 (121)
55 cd08400 C2_Ras_p21A1 C2 domain 99.7 1.2E-15 2.5E-20 128.7 14.6 116 245-374 4-123 (126)
56 cd04041 C2A_fungal C2 domain f 99.7 2.7E-16 5.9E-21 129.5 10.0 102 246-355 2-107 (111)
57 cd08692 C2B_Tac2-N C2 domain s 99.7 2.7E-16 5.8E-21 133.3 10.1 103 243-351 12-117 (135)
58 cd08376 C2B_MCTP_PRT C2 domain 99.7 1.6E-15 3.5E-20 125.5 13.2 110 247-373 2-114 (116)
59 cd08681 C2_fungal_Inn1p-like C 99.7 8.8E-16 1.9E-20 127.4 11.1 113 246-373 2-118 (118)
60 cd08678 C2_C21orf25-like C2 do 99.6 1.9E-15 4.1E-20 127.2 12.8 116 247-374 1-120 (126)
61 cd08375 C2_Intersectin C2 doma 99.6 2.3E-15 4.9E-20 128.6 13.1 93 244-347 14-106 (136)
62 cd08407 C2B_Synaptotagmin-13 C 99.6 4.6E-16 9.9E-21 133.1 8.7 113 244-360 14-129 (138)
63 cd04050 C2B_Synaptotagmin-like 99.6 1.3E-15 2.9E-20 124.1 11.1 96 247-356 2-102 (105)
64 cd04025 C2B_RasA1_RasA4 C2 dom 99.6 2.7E-15 5.9E-20 125.5 13.1 115 246-371 1-122 (123)
65 cd04031 C2A_RIM1alpha C2 domai 99.6 1.7E-15 3.8E-20 126.8 11.9 105 244-354 15-124 (125)
66 cd04040 C2D_Tricalbin-like C2 99.6 2.3E-15 5E-20 124.3 12.3 111 247-369 1-114 (115)
67 cd08373 C2A_Ferlin C2 domain f 99.6 4.1E-15 8.9E-20 125.2 13.4 110 251-374 2-116 (127)
68 cd08688 C2_KIAA0528-like C2 do 99.6 1.2E-15 2.7E-20 125.3 10.0 99 247-356 1-109 (110)
69 cd08404 C2B_Synaptotagmin-4 C2 99.6 5E-16 1.1E-20 132.5 7.8 112 245-362 15-129 (136)
70 cd04018 C2C_Ferlin C2 domain t 99.6 1.6E-15 3.4E-20 131.6 11.1 107 246-357 1-126 (151)
71 cd08680 C2_Kibra C2 domain fou 99.6 1.6E-15 3.5E-20 127.5 10.3 97 245-347 14-113 (124)
72 cd08385 C2A_Synaptotagmin-1-5- 99.6 2.5E-15 5.5E-20 125.8 11.1 97 245-349 16-114 (124)
73 cd08382 C2_Smurf-like C2 domai 99.6 4.8E-15 1E-19 124.3 12.5 113 247-371 2-122 (123)
74 cd08685 C2_RGS-like C2 domain 99.6 2E-15 4.4E-20 126.0 9.8 98 245-349 12-111 (119)
75 KOG1030 Predicted Ca2+-depende 99.6 1.3E-15 2.9E-20 131.4 8.9 92 245-348 6-97 (168)
76 cd04032 C2_Perforin C2 domain 99.6 4.7E-15 1E-19 125.0 11.7 93 244-348 27-120 (127)
77 cd08402 C2B_Synaptotagmin-1 C2 99.6 1E-15 2.2E-20 130.5 7.6 111 245-361 15-128 (136)
78 cd04030 C2C_KIAA1228 C2 domain 99.6 4.3E-15 9.4E-20 124.8 11.3 98 245-348 16-117 (127)
79 cd04011 C2B_Ferlin C2 domain s 99.6 5E-15 1.1E-19 121.8 11.4 97 245-356 4-110 (111)
80 cd08391 C2A_C2C_Synaptotagmin_ 99.6 1.4E-14 3.1E-19 120.3 13.8 117 246-373 2-121 (121)
81 cd04024 C2A_Synaptotagmin-like 99.6 1.4E-14 3.1E-19 121.7 13.7 117 246-373 2-128 (128)
82 cd08387 C2A_Synaptotagmin-8 C2 99.6 4.7E-15 1E-19 124.3 10.5 97 245-349 16-114 (124)
83 cd08521 C2A_SLP C2 domain firs 99.6 6.3E-15 1.4E-19 123.0 11.2 99 244-348 13-114 (123)
84 cd08388 C2A_Synaptotagmin-4-11 99.6 6.2E-15 1.3E-19 124.6 11.1 96 245-348 16-115 (128)
85 cd08384 C2B_Rabphilin_Doc2 C2 99.6 2.3E-15 5.1E-20 127.7 8.6 112 244-361 12-126 (133)
86 cd04043 C2_Munc13_fungal C2 do 99.6 2.3E-14 5.1E-19 120.2 14.1 113 246-373 2-120 (126)
87 cd04009 C2B_Munc13-like C2 dom 99.6 6.8E-15 1.5E-19 125.1 10.8 96 245-346 16-117 (133)
88 cd04054 C2A_Rasal1_RasA4 C2 do 99.6 2E-14 4.3E-19 120.2 13.2 115 247-372 2-120 (121)
89 cd08403 C2B_Synaptotagmin-3-5- 99.6 2.3E-15 5.1E-20 128.0 7.7 113 244-362 13-128 (134)
90 cd08401 C2A_RasA2_RasA3 C2 dom 99.6 2.7E-14 5.9E-19 119.5 13.7 115 247-373 2-121 (121)
91 cd08410 C2B_Synaptotagmin-17 C 99.6 2.9E-15 6.2E-20 127.8 7.8 112 245-362 14-129 (135)
92 cd04014 C2_PKC_epsilon C2 doma 99.6 3.1E-14 6.6E-19 120.8 13.9 116 245-373 4-128 (132)
93 cd04027 C2B_Munc13 C2 domain s 99.6 3.3E-14 7E-19 119.9 13.6 114 246-371 2-127 (127)
94 cd04051 C2_SRC2_like C2 domain 99.6 8.6E-15 1.9E-19 122.8 9.5 107 246-362 1-120 (125)
95 cd08386 C2A_Synaptotagmin-7 C2 99.6 2.1E-14 4.5E-19 120.4 11.7 98 244-349 15-115 (125)
96 cd04048 C2A_Copine C2 domain f 99.6 1.7E-14 3.7E-19 120.3 11.1 103 251-359 6-117 (120)
97 cd04046 C2_Calpain C2 domain p 99.6 9.9E-14 2.1E-18 116.8 15.8 116 245-373 3-121 (126)
98 cd08405 C2B_Synaptotagmin-7 C2 99.6 4.4E-15 9.6E-20 126.6 7.4 112 245-362 15-129 (136)
99 cd04044 C2A_Tricalbin-like C2 99.6 4.4E-14 9.6E-19 117.9 13.2 119 245-374 2-123 (124)
100 cd08389 C2A_Synaptotagmin-14_1 99.6 2.1E-14 4.5E-19 120.7 10.7 101 245-354 16-122 (124)
101 cd04026 C2_PKC_alpha_gamma C2 99.6 3E-14 6.4E-19 120.6 11.5 110 245-360 13-126 (131)
102 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.6 2.4E-14 5.3E-19 125.9 11.2 97 244-346 26-125 (162)
103 cd04017 C2D_Ferlin C2 domain f 99.6 7.9E-14 1.7E-18 118.8 13.8 114 246-373 2-131 (135)
104 cd08390 C2A_Synaptotagmin-15-1 99.6 2.9E-14 6.4E-19 119.1 10.5 103 244-354 13-121 (123)
105 cd04037 C2E_Ferlin C2 domain f 99.5 3.7E-14 8E-19 119.1 11.1 91 247-346 2-92 (124)
106 cd08690 C2_Freud-1 C2 domain f 99.5 1.6E-13 3.4E-18 119.4 14.8 121 247-373 4-136 (155)
107 cd08409 C2B_Synaptotagmin-15 C 99.5 2.4E-14 5.3E-19 122.4 9.6 97 245-348 15-113 (137)
108 cd04035 C2A_Rabphilin_Doc2 C2 99.5 4E-14 8.6E-19 118.5 10.5 99 244-349 14-115 (123)
109 cd08408 C2B_Synaptotagmin-14_1 99.5 4E-14 8.7E-19 121.2 9.8 98 244-347 14-114 (138)
110 cd00276 C2B_Synaptotagmin C2 d 99.5 1.8E-14 3.8E-19 121.9 7.4 112 245-362 14-128 (134)
111 cd04038 C2_ArfGAP C2 domain pr 99.5 6.7E-14 1.4E-18 120.8 10.9 91 245-348 2-92 (145)
112 cd08691 C2_NEDL1-like C2 domai 99.5 3.8E-13 8.2E-18 115.0 13.5 94 246-348 2-107 (137)
113 cd08675 C2B_RasGAP C2 domain s 99.5 1.6E-13 3.6E-18 117.3 11.3 104 247-358 1-122 (137)
114 cd08686 C2_ABR C2 domain in th 99.5 1.4E-13 3.1E-18 113.8 10.4 92 247-351 1-102 (118)
115 cd04013 C2_SynGAP_like C2 doma 99.5 5.5E-13 1.2E-17 114.8 13.3 115 244-374 10-139 (146)
116 cd08394 C2A_Munc13 C2 domain f 99.5 2.6E-13 5.6E-18 113.6 10.8 93 246-355 3-100 (127)
117 cd04045 C2C_Tricalbin-like C2 99.5 2.2E-13 4.7E-18 113.9 10.4 92 246-348 2-93 (120)
118 cd04049 C2_putative_Elicitor-r 99.5 2.7E-13 5.9E-18 113.6 10.9 91 246-347 2-96 (124)
119 PLN03008 Phospholipase D delta 99.5 3.5E-13 7.6E-18 141.6 14.0 99 270-374 75-177 (868)
120 cd08676 C2A_Munc13-like C2 dom 99.5 5.7E-13 1.2E-17 115.9 11.5 95 242-346 25-143 (153)
121 cd08383 C2A_RasGAP C2 domain ( 99.4 1.9E-12 4.1E-17 106.9 13.2 113 247-373 2-117 (117)
122 cd04021 C2_E3_ubiquitin_ligase 99.4 1.5E-12 3.2E-17 109.6 12.3 114 245-371 2-124 (125)
123 cd04052 C2B_Tricalbin-like C2 99.4 1.1E-12 2.5E-17 107.9 11.2 96 268-373 9-108 (111)
124 PF00168 C2: C2 domain; Inter 99.4 5E-13 1.1E-17 103.0 8.4 85 247-339 1-85 (85)
125 cd04047 C2B_Copine C2 domain s 99.4 2.6E-12 5.6E-17 105.3 10.3 92 250-348 5-101 (110)
126 KOG0696 Serine/threonine prote 99.4 5.7E-13 1.2E-17 129.3 5.7 96 245-346 180-276 (683)
127 KOG1028 Ca2+-dependent phospho 99.3 1.3E-11 2.8E-16 124.1 12.4 121 245-373 167-293 (421)
128 smart00239 C2 Protein kinase C 99.3 2E-11 4.4E-16 96.1 10.7 99 247-353 2-100 (101)
129 cd08374 C2F_Ferlin C2 domain s 99.2 6.8E-11 1.5E-15 100.2 10.1 97 247-349 2-125 (133)
130 PLN03200 cellulose synthase-in 99.2 9.7E-11 2.1E-15 133.6 11.0 114 244-373 1979-2099(2102)
131 PLN02270 phospholipase D alpha 99.1 4.6E-10 9.9E-15 118.3 13.0 124 245-374 8-148 (808)
132 KOG1028 Ca2+-dependent phospho 99.1 4.9E-10 1.1E-14 112.7 12.4 175 162-344 189-393 (421)
133 KOG1011 Neurotransmitter relea 99.1 1.9E-10 4.2E-15 116.1 8.0 115 245-371 295-421 (1283)
134 cd00030 C2 C2 domain. The C2 d 99.1 1E-09 2.2E-14 85.7 10.1 90 247-346 1-90 (102)
135 COG5038 Ca2+-dependent lipid-b 98.9 6.7E-09 1.4E-13 111.6 10.1 103 245-357 1040-1145(1227)
136 KOG1328 Synaptic vesicle prote 98.7 7E-09 1.5E-13 106.2 2.1 96 245-346 947-1048(1103)
137 PLN02352 phospholipase D epsil 98.7 1.6E-07 3.5E-12 99.0 12.2 118 244-374 9-130 (758)
138 cd08689 C2_fungal_Pkc1p C2 dom 98.3 9.6E-07 2.1E-11 71.2 5.7 89 247-348 1-89 (109)
139 COG5038 Ca2+-dependent lipid-b 98.3 2.7E-06 5.9E-11 92.0 10.7 94 245-347 436-529 (1227)
140 KOG2059 Ras GTPase-activating 98.2 6.8E-06 1.5E-10 84.8 9.2 105 245-361 5-114 (800)
141 KOG1264 Phospholipase C [Lipid 98.2 5.7E-07 1.2E-11 93.5 1.2 39 2-40 418-457 (1267)
142 KOG1011 Neurotransmitter relea 98.1 1E-05 2.2E-10 82.6 8.8 103 245-354 1125-1235(1283)
143 KOG1031 Predicted Ca2+-depende 98.0 1.7E-05 3.6E-10 80.2 8.8 120 245-374 3-138 (1169)
144 KOG2059 Ras GTPase-activating 98.0 3.1E-05 6.8E-10 80.0 9.8 76 270-346 149-240 (800)
145 KOG0905 Phosphoinositide 3-kin 98.0 6.2E-06 1.4E-10 88.9 4.4 96 245-346 1524-1622(1639)
146 KOG1013 Synaptic vesicle prote 97.7 4.1E-05 8.8E-10 73.0 5.4 104 246-361 234-339 (362)
147 cd08398 C2_PI3K_class_I_alpha 97.6 0.00098 2.1E-08 58.3 12.3 102 245-356 8-121 (158)
148 cd08693 C2_PI3K_class_I_beta_d 97.6 0.00084 1.8E-08 59.7 11.9 103 245-355 8-134 (173)
149 cd08380 C2_PI3K_like C2 domain 97.6 0.0011 2.4E-08 57.7 11.6 104 246-356 9-122 (156)
150 cd04012 C2A_PI3K_class_II C2 d 97.5 0.0012 2.6E-08 58.6 10.4 113 244-362 7-141 (171)
151 KOG1328 Synaptic vesicle prote 97.4 4.6E-05 9.9E-10 78.9 1.4 67 290-356 179-283 (1103)
152 cd08683 C2_C2cd3 C2 domain fou 97.4 0.00045 9.8E-09 57.7 6.5 73 272-345 33-130 (143)
153 KOG1326 Membrane-associated pr 97.3 0.00016 3.5E-09 77.4 3.7 94 242-344 610-703 (1105)
154 cd08397 C2_PI3K_class_III C2 d 97.3 0.0012 2.5E-08 58.0 8.2 85 271-355 29-121 (159)
155 KOG1013 Synaptic vesicle prote 97.2 8E-05 1.7E-09 71.0 -0.3 98 245-348 93-193 (362)
156 PLN02964 phosphatidylserine de 97.2 0.001 2.3E-08 70.1 7.6 86 244-346 53-138 (644)
157 cd08399 C2_PI3K_class_I_gamma 97.0 0.0062 1.3E-07 54.3 9.9 102 246-354 11-135 (178)
158 cd08684 C2A_Tac2-N C2 domain f 96.9 0.0017 3.8E-08 50.7 4.7 90 249-347 3-94 (103)
159 PF00792 PI3K_C2: Phosphoinosi 96.7 0.0055 1.2E-07 52.5 7.2 82 274-355 4-99 (142)
160 cd08589 PI-PLCc_SaPLC1_like Ca 96.4 0.0018 3.8E-08 62.8 2.5 37 1-37 161-209 (324)
161 KOG3837 Uncharacterized conser 95.8 0.013 2.9E-07 57.7 4.9 120 246-373 368-502 (523)
162 KOG1327 Copine [Signal transdu 94.6 0.085 1.9E-06 54.1 6.8 83 290-372 43-130 (529)
163 KOG2060 Rab3 effector RIM1 and 94.5 0.02 4.3E-07 55.9 1.9 106 244-355 268-378 (405)
164 KOG1326 Membrane-associated pr 92.9 0.076 1.6E-06 57.7 3.1 83 268-355 223-316 (1105)
165 smart00142 PI3K_C2 Phosphoinos 92.4 0.75 1.6E-05 36.8 7.6 56 272-327 32-91 (100)
166 cd08695 C2_Dock-B C2 domains f 92.4 0.8 1.7E-05 41.2 8.4 56 287-342 52-111 (189)
167 cd08694 C2_Dock-A C2 domains f 91.4 2.2 4.8E-05 38.6 10.1 68 288-355 53-131 (196)
168 PF10358 NT-C2: N-terminal C2 90.8 7.7 0.00017 32.6 12.7 114 245-373 7-134 (143)
169 PF14429 DOCK-C2: C2 domain in 90.4 1.1 2.3E-05 40.0 7.3 67 289-355 60-135 (184)
170 KOG1327 Copine [Signal transdu 90.0 0.48 1E-05 48.8 5.2 82 266-347 151-236 (529)
171 cd08679 C2_DOCK180_related C2 89.8 1.2 2.5E-05 39.6 7.0 65 292-356 56-132 (178)
172 PF15627 CEP76-C2: CEP76 C2 do 89.2 8.5 0.00018 33.5 11.5 124 243-373 7-149 (156)
173 KOG0904 Phosphatidylinositol 3 83.4 7.3 0.00016 42.5 9.6 102 246-356 344-471 (1076)
174 KOG1329 Phospholipase D1 [Lipi 83.3 1.4 2.9E-05 48.0 4.3 97 272-373 138-239 (887)
175 PF12416 DUF3668: Cep120 prote 76.6 29 0.00063 34.2 10.8 99 247-359 2-116 (340)
176 cd08696 C2_Dock-C C2 domains f 72.5 17 0.00036 32.5 7.3 67 288-354 54-131 (179)
177 cd08557 PI-PLCc_bacteria_like 72.1 2.8 6E-05 39.3 2.4 37 1-38 122-159 (271)
178 cd08697 C2_Dock-D C2 domains f 71.6 18 0.00039 32.5 7.3 68 288-355 56-138 (185)
179 cd08590 PI-PLCc_Rv2075c_like C 69.6 3.3 7.1E-05 39.4 2.3 34 1-34 128-167 (267)
180 KOG0906 Phosphatidylinositol 3 69.4 4.8 0.0001 42.5 3.5 85 271-355 46-138 (843)
181 PF15625 CC2D2AN-C2: CC2D2A N- 68.1 23 0.0005 31.1 7.3 67 273-346 38-107 (168)
182 PF14186 Aida_C2: Cytoskeletal 59.7 39 0.00085 29.2 6.8 121 244-373 12-147 (147)
183 PF11618 DUF3250: Protein of u 54.2 55 0.0012 26.6 6.5 79 289-371 12-102 (107)
184 KOG1452 Predicted Rho GTPase-a 51.2 38 0.00083 32.9 5.8 77 244-330 50-126 (442)
185 cd08687 C2_PKN-like C2 domain 47.5 38 0.00082 26.9 4.3 62 299-373 31-92 (98)
186 cd08586 PI-PLCc_BcPLC_like Cat 39.0 24 0.00052 33.7 2.6 35 3-37 112-149 (279)
187 PF07162 B9-C2: Ciliary basal 38.1 1.1E+02 0.0023 26.8 6.4 57 300-357 56-117 (168)
188 PF14924 DUF4497: Protein of u 36.4 57 0.0012 26.5 4.1 44 330-373 45-105 (112)
189 PF14909 SPATA6: Spermatogenes 22.9 4.9E+02 0.011 22.3 9.1 82 247-343 4-97 (140)
190 PF06485 DUF1092: Protein of u 20.9 48 0.001 31.5 1.1 82 124-208 131-216 (270)
191 PF12620 DUF3778: Protein of u 20.7 51 0.0011 24.0 1.0 16 181-196 36-51 (61)
192 cd08622 PI-PLCXDc_CG14945_like 20.3 72 0.0016 30.4 2.2 26 1-27 124-149 (276)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=1.9e-99 Score=769.79 Aligned_cols=372 Identities=63% Similarity=1.075 Sum_probs=306.4
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 80 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
||++||||+||+++.+....||||++||||||||+|++++++++....+.+ ... ....++++.|+.+..++.....+.
T Consensus 223 ~~~~~~Gd~L~~~~~~~~~~lpsP~~Lk~kilik~Kk~~~~~e~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~s~~ 300 (598)
T PLN02230 223 MITQTFGDMLYYHDSEGCQEFPSPEELKEKILISTKPPKEYLEANDAKEKD-NGE-KGKDSDEDVWGKEPEDLISTQSDL 300 (598)
T ss_pred HHHHHHhhhhccCCCcccCCCCChHHHcCCEEEEecCCccccccccccccc-ccc-cccccchhhhcccccccccccccc
Confidence 689999999999887778899999999999999999998776543211100 000 011122333443333222111100
Q ss_pred CCCC--CCCCCCCCC--CCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccc
Q 017257 81 CDKD--DFDGGVDND--EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDI 156 (374)
Q Consensus 81 ~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~ 156 (374)
+... ..+.+...+ .+....+...+++++|++||+|+++++|++|+.+++..+.+++|+||||+++.+++++++.+|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~ 380 (598)
T PLN02230 301 DKVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADV 380 (598)
T ss_pred ccccccccccccchhccccccccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHH
Confidence 0000 000000000 001111233467999999999999999999999998888778999999999999999999999
Q ss_pred hhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccC
Q 017257 157 VRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD 236 (374)
Q Consensus 157 ~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~ 236 (374)
++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|+
T Consensus 381 v~~nk~~L~RIYPkG~RvdSSNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fd 460 (598)
T PLN02230 381 IRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFY 460 (598)
T ss_pred HHhhhhhceeeCCCCCcCCCCCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765556799
Q ss_pred CCCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc
Q 017257 237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 316 (374)
Q Consensus 237 p~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel 316 (374)
|....+++.+|+|+|++||+|++++++.+.+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|.|.+.+|||
T Consensus 461 P~~~~~~~~~L~V~VisGq~~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPEL 540 (598)
T PLN02230 461 PKDNSCPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPEL 540 (598)
T ss_pred CCcCCCcCcEEEEEEEEccCccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCce
Confidence 98776677899999999999987766666777889999999999999999999999988888999999999999999999
Q ss_pred cEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
|+|||.|+|+|..++++|+||+||||++|++|||||||+|..|+++.+++|||||+|.
T Consensus 541 AllRf~V~d~d~~~~ddfiGQ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 541 ALLRVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred eEEEEEEEECCCCCCCCEEEEEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 9999999999987889999999999999999999999999999999999999999985
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=3.1e-97 Score=752.63 Aligned_cols=369 Identities=73% Similarity=1.257 Sum_probs=303.0
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||++||||+||+++. +....||||++||||||||+|++++.++.......+ .....+++..++.++++...+..+
T Consensus 212 ~~~~~~g~~L~~~~~~~~~~~lpsP~~Lk~kilik~K~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 287 (581)
T PLN02222 212 MVTEIFGEILFTPPVGESLKEFPSPNSLKKRIIISTKPPKEYKEGKDDEVVQ----KGKDLGDEEVWGREVPSFIQRNKS 287 (581)
T ss_pred HHHHHHhhhhcCCCccccccCCCChHHHCCCEEEEecCCccccccccccccc----cccccccccccccccccccccccc
Confidence 689999999999884 457899999999999999999998665442110000 001111222234333433221111
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
.++.+..+.+ .++++...++.+...+++|++|++|+.+++++++...++..|..++++||||+++.+++++++.+|++|
T Consensus 288 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~ 366 (581)
T PLN02222 288 VDKNDSNGDD-DDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRF 366 (581)
T ss_pred cccccccccc-cccccccccccccccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHH
Confidence 1111100000 011111222334557899999999999999998887776667678999999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCC
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~ 239 (374)
|++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+.......|+|..
T Consensus 367 n~~~L~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~ 446 (581)
T PLN02222 367 TQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA 446 (581)
T ss_pred hhhhceeeCCCCCcCcCCCCCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998765445799987
Q ss_pred CCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEE
Q 017257 240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL 319 (374)
Q Consensus 240 ~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~L 319 (374)
..+++.+|+|+|++||+|+++.++.+.+..+++||||+|+|.|.|.|+.++||+++.+|+||+|||+|+|.+..||+|+|
T Consensus 447 ~~~~~~~L~V~Visgq~~~l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAll 526 (581)
T PLN02222 447 TLPVKTTLRVTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALL 526 (581)
T ss_pred CCCccceEEEEEEEcccccCCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEE
Confidence 77778899999999999887666666667788999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 320 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 320 rf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
||.|+|+|..+.++|+||+|+||++|++|||||||+|.+|+++.+++|||||+|+
T Consensus 527 Rf~V~d~D~~~~ddfigq~~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 527 RLEVHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred EEEEEECCCCCCCcEEEEEEcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 9999999987789999999999999999999999999999999999999999985
No 3
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-96 Score=745.44 Aligned_cols=345 Identities=52% Similarity=0.836 Sum_probs=290.2
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||++|||||||+++. ..++.|||||+||+|||||+||++++++... . ++.+.. +.+
T Consensus 397 ~~~~ifGd~Ly~~~~~~~~~~lPSPe~LK~KILik~Kk~~~~~~~~~---------------~------~~~~~~--~~d 453 (746)
T KOG0169|consen 397 MLKEIFGDMLYTPPPDSSLKELPSPEELKNKILIKGKKLKELLEADS---------------K------EPSSFE--VTD 453 (746)
T ss_pred HHHHHhhhheeccCCCCccccCcCHHHHhcCEEEecCCCCccccccc---------------c------cccccc--ccc
Confidence 689999999999885 4799999999999999999999987764311 0 000000 000
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
++++.+...+.+.++.....+....+++|||+||.||.+++|++|..++... +.++++||||+++.+++++.+.+|++|
T Consensus 454 ~~~~~e~s~e~~~~~~~~~~~~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~ 532 (746)
T KOG0169|consen 454 EDEDKESSTENDKSETDGQKKSRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRH 532 (746)
T ss_pred ccccccccccccccccccccchhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHH
Confidence 1111110000000111111222337999999999999999999999998775 578999999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCC
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~ 239 (374)
|+++|+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++||+|||||||.+||+.. ..|+|..
T Consensus 533 t~r~L~RvYP~~~R~dSSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~---~~F~P~~ 609 (746)
T KOG0169|consen 533 TQRNLLRVYPKGLRVDSSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSG---STFDPKS 609 (746)
T ss_pred hHhheeeecCCccccCCCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCC---CccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999943 4799966
Q ss_pred C-CCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeecCCcc
Q 017257 240 K-LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELA 317 (374)
Q Consensus 240 ~-~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~pela 317 (374)
. .++..+|+|+|++||+|+.++.++.. ....||||.|+|+|+|.|+.+++|+++++| +||.|+|+|+|++.+||||
T Consensus 610 ~~~~~~~tL~IkI~sGq~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELA 687 (746)
T KOG0169|consen 610 NLPPVKKTLKIKIISGQGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELA 687 (746)
T ss_pred CCCCCCceeEEEEEecCcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEecccee
Confidence 6 34455899999999998876554433 356799999999999999999999977765 8999999999999999999
Q ss_pred EEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 318 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 318 ~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
+|||.|+|+|..++|||+||+|+||++|++|||||||+|..|+.+..++|||||+|.
T Consensus 688 liRF~V~d~d~~~~ddF~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 688 LIRFEVHDYDYIGKDDFIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred EEEEEEEecCCCCcccccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999984
No 4
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=8e-93 Score=722.54 Aligned_cols=365 Identities=67% Similarity=1.143 Sum_probs=295.8
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhh---hhccccCCCCCCcccccCCCcCCccccC
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE---KENDSQRGKGSADEEAWGKEVPNLKSLN 77 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (374)
||++||||+||.|..+....||||++||||||||+|+++++++...... ....+......++++ .+..++....
T Consensus 232 ~~~~~~g~~L~~p~~~~~~~lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 308 (599)
T PLN02952 232 MATQIFGQMLYYPESDSLVQFPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESML 308 (599)
T ss_pred HHHHHHhhhhcCCCCcccCCCCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---cccccccccc
Confidence 6899999999998766678999999999999999999987765421100 000000000000000 0000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccch
Q 017257 78 NSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV 157 (374)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~ 157 (374)
.+.+.+ ...+++....+.....+++|++|++|+.+++++.+.++....+..++++||||+++.+++++++.+|+
T Consensus 309 ----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v 382 (599)
T PLN02952 309 ----FEQEAD--SRSDSDQDDNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVV 382 (599)
T ss_pred ----cccccc--ccccccchhhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHH
Confidence 000000 00000111112234567899999999999998888776655455678999999999999999999999
Q ss_pred hccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCC
Q 017257 158 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP 237 (374)
Q Consensus 158 ~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p 237 (374)
+||++||+||||+|+|+|||||||+.+|++|||||||||||+|++||||+|||++||+|||||||++||.....+..|+|
T Consensus 383 ~~n~~~l~RiYP~g~R~dSsNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp 462 (599)
T PLN02952 383 RFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDP 462 (599)
T ss_pred HHhhhhceeeCCCCCcCcCCCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986544457999
Q ss_pred CCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc
Q 017257 238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA 317 (374)
Q Consensus 238 ~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela 317 (374)
....+++.+|+|+||+||+|+++......+..+++||||+|+|+|.|.|+.++||+++.||+||+|||+|.|.+.+||+|
T Consensus 463 ~~~~~~~~~L~V~VisGq~l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELA 542 (599)
T PLN02952 463 KKKLPVKKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELA 542 (599)
T ss_pred CCCCCccceEEEEEEECcccCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCcc
Confidence 88777788999999999999876544556677889999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 318 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 318 ~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
+|+|+|+|+|..+.++|+||+|+||++|++|||||||+|.+|++++.++|||||+|+
T Consensus 543 llrf~V~D~D~~~~ddfiGq~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 543 LLRIEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EEEEEEEecCCCCCCCeEEEEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 999999999988889999999999999999999999999999999999999999985
No 5
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=4.3e-92 Score=713.29 Aligned_cols=346 Identities=58% Similarity=1.007 Sum_probs=287.9
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 80 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
||++||||+||+++.+....||||++||||||||+|++++.++.+..... ...++++..+..
T Consensus 215 ~~~~~lg~~L~~~~~~~~~~lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~------~~~~~~~~~~~~------------ 276 (567)
T PLN02228 215 MLTKTFRGMLFRCTSESTKHFPSPEELKNKILISTKPPKEYLESKTVQTT------RTPTVKETSWKR------------ 276 (567)
T ss_pred HHHHHHhHhhcCCCCCccCCCCChHHHCCCEEEEecCCcccccccccccc------cccccccccccc------------
Confidence 68999999999988777789999999999999999998754432110000 000000000000
Q ss_pred CCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhcc
Q 017257 81 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFT 160 (374)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~ 160 (374)
..+ .++......+....++++|++|++|+..++++++.......|...+++||||+++.+++++++.+|++||
T Consensus 277 --~~~-----~~~~~~~~~~~~~~~~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hN 349 (567)
T PLN02228 277 --VAD-----AENKILEEYKDEESEAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFT 349 (567)
T ss_pred --ccc-----chhhccccccccchhhhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHh
Confidence 000 0000000001123567999999999998888877766555565668999999999999999999999999
Q ss_pred ccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCC
Q 017257 161 QRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240 (374)
Q Consensus 161 ~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~ 240 (374)
++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++||+|||||||++||+.. ..|+|...
T Consensus 350 kr~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~ 426 (567)
T PLN02228 350 QRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKR 426 (567)
T ss_pred hhhceeeCCCCCcCCCCCCCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999753 36999877
Q ss_pred CCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCcc-CcEEEEEeecCCccEE
Q 017257 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALL 319 (374)
Q Consensus 241 ~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pela~L 319 (374)
.+++.+|+|+||+||+|+++++..+.+..+++||||+|+|.|.|.|+.++||+++.|++||+| ||+|+|.+.+||+|+|
T Consensus 427 ~p~~~~L~I~ViSGq~l~lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~l 506 (567)
T PLN02228 427 LPIKTTLKVKIYTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALL 506 (567)
T ss_pred CCcCceEEEEEEECCccCCCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEE
Confidence 777778999999999997655444455667899999999999999999999999998899999 9999999999999999
Q ss_pred EEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 320 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 320 rf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
||.|+|+|..+.++|+||+|+||++|++|||||||+|..|+++.+++|||||+|.
T Consensus 507 Rf~V~D~d~~~~d~figq~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 507 WFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred EEEEEeCCCCCCCCEEEEEEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 9999999987789999999999999999999999999999999999999999984
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=1.1e-87 Score=671.91 Aligned_cols=318 Identities=44% Similarity=0.832 Sum_probs=261.7
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||++||||+||+++. +..+.||||++||||||||+|++++++++.. ++ + ++
T Consensus 216 ~l~~i~Gd~L~~~~~~~~~~~lPSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~-~~--------- 267 (537)
T PLN02223 216 MIDQTFGDMVYHEDPQHSLEEFPSPAELQNKILISRRPPKELLYAKA---------------DD---G-GV--------- 267 (537)
T ss_pred HHHHHHhhhhcCCCCccccccCCChHHhCCCEEEEcCCCcccccccc---------------cc---c-cc---------
Confidence 689999999999875 5678999999999999999999976543310 00 0 00
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhh--ccccch
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGT--YGNDIV 157 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~--~~~~~~ 157 (374)
..+++ .+.. .....++|++||.++.+++++. +.+++|.++.++.+. ++.+++
T Consensus 268 -~~~~~------~~~~------~~~~~~~y~~li~~~~~~~~~~-------------~~~~~~~~~~~~~~~s~~~~~~v 321 (537)
T PLN02223 268 -GVRNE------LEIQ------EGPADKNYQSLVGFHAVEPRGM-------------LQKALTGKADDIQQPGWYERDII 321 (537)
T ss_pred -ccccc------cccc------ccccccceeeeeeeeccccccc-------------hhhhhccchhhhhhccccchhhh
Confidence 00000 0000 0123467888888776655332 345566666665543 367899
Q ss_pred hccccceeeeecCCcc-cCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccC
Q 017257 158 RFTQRNLLRIYPKGIR-VDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD 236 (374)
Q Consensus 158 ~~~~~~l~RvYP~g~R-~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~ 236 (374)
+||++||+||||+|+| +|||||||+.+|++|||||||||||+|++||||+|||++||+|||||||++||+.+++ ..|+
T Consensus 322 ~ft~~~l~RiYPkG~R~~dSSNYnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~-~~Fd 400 (537)
T PLN02223 322 SFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPS-GVFY 400 (537)
T ss_pred hhcccceEEECCCCCccccCCCCCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcc-cccC
Confidence 9999999999999999 5999999999999999999999999999999999999999999999999999987544 2799
Q ss_pred CCCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc
Q 017257 237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 316 (374)
Q Consensus 237 p~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel 316 (374)
|......+.+|+|+||+|++|+.+.+++. +..+.+||||+|+|.|.|.|+.+++|.+..|++||+|||+|+|.|.+||+
T Consensus 401 P~~~~~~~~~L~V~Visgq~~~~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PEL 479 (537)
T PLN02223 401 PTENPVVVKILKVKIYMGDGWIVDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDL 479 (537)
T ss_pred CCCCcccceEEEEEEEEcccccCCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCc
Confidence 97655567889999999999975443332 44578999999999999999999999866667999999999999999999
Q ss_pred cEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
|+|||+|+|+|..+.++|+||+|+||++|++|||||||+|.+|+++..++|||||+|.
T Consensus 480 AlLrf~V~D~D~~~~ddfiGQ~~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 480 ALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred eEEEEEEEecCCCCCCcEEEEEecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 9999999999988889999999999999999999999999999999999999999984
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-73 Score=576.28 Aligned_cols=254 Identities=34% Similarity=0.496 Sum_probs=230.1
Q ss_pred ccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCc
Q 017257 102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNP 181 (374)
Q Consensus 102 ~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P 181 (374)
...+++|+|.||.|.+.++|.+|+-+.+.+. +|+|+||+|+++..++++++-+||.||+++|+||||+|+|||||||.|
T Consensus 560 e~~a~~e~S~lVNyiqpvkf~sfe~a~krN~-~f~msSf~E~~~~~~Lk~~~iefV~yNK~QlSRIYPKgtRvdSSNymP 638 (1189)
T KOG1265|consen 560 ETNAHEEMSSLVNYIQPVKFSSFEIAEKRNR-HFEMSSFDESTGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMP 638 (1189)
T ss_pred hhhhHHHHHhhhhhcccccccchhhhhhhcc-eeeeeechhHHHHHHHHhCchHHhhhhhHhhhccccCcccccccccch
Confidence 4468899999999999999999999987764 899999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCCCCc----ceEEEEEEEecccc
Q 017257 182 LIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMGEGW 257 (374)
Q Consensus 182 ~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~~~~----~~~L~V~Visa~~l 257 (374)
+.|||+|||||||||||.|.+||||.|||.-||+|||+|||+|||.++ ..|||....++ ..++.|+|||||-|
T Consensus 639 qifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r~fdPFse~~VdgvIA~t~sV~VISgqFL 715 (1189)
T KOG1265|consen 639 QIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---RQFDPFSESPVDGVIAATLSVTVISGQFL 715 (1189)
T ss_pred HHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---cCcCCcccCcccceEEeeEEEEEEeeeec
Confidence 999999999999999999999999999999999999999999999975 46999876543 56899999999987
Q ss_pred ccCCCCCcccCCCCCCceEEEEEecCCCCce--eeeeeeccCC-CCCccCc-EEEEE-eecCCccEEEEEEEeeCCCCCC
Q 017257 258 YYDFPHTHFDAYSPPDFYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKD 332 (374)
Q Consensus 258 ~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~--k~kTk~v~~~-~nP~Wne-~f~F~-v~~pela~Lrf~V~D~d~~~~d 332 (374)
.. . ....||+|.+.|.|.|.. .+||+++.+| +||+|+| .|.|. |..|+||+|||.|+++. .
T Consensus 716 Sd------r----kvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eepfvF~KVvLpeLA~lRiavyeEg----g 781 (1189)
T KOG1265|consen 716 SD------R----KVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEPFVFRKVVLPELASLRIAVYEEG----G 781 (1189)
T ss_pred cc------c----ccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCCcccceecccchhheeeeeeccC----C
Confidence 42 1 123599999999999976 4689998876 8999985 69995 77899999999999864 5
Q ss_pred CccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257 333 DFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 333 d~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
.||||-.+||+.|+.|||||-|++..++++..+.|||.|..
T Consensus 782 K~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 782 KFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred ceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 79999999999999999999999999999988999999875
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-68 Score=536.41 Aligned_cols=257 Identities=33% Similarity=0.494 Sum_probs=229.0
Q ss_pred ccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCc
Q 017257 102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNP 181 (374)
Q Consensus 102 ~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P 181 (374)
...|+.|||+||+||+++++.. .+. .++...+|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||
T Consensus 926 ~krIA~ElSdLVVYcr~vp~~~-~~~--~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P 1002 (1267)
T KOG1264|consen 926 NKRIAIELSDLVVYCRPVPKTK-DNL--ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDP 1002 (1267)
T ss_pred HHHHHHHhhceEEEEecCCCcc-ccc--ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCC
Confidence 3479999999999999999531 111 2244678999999999999998888999999999999999999999999999
Q ss_pred cccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCCC---C-cceEEEEEEEecccc
Q 017257 182 LIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL---P-AKKTLKVTVYMGEGW 257 (374)
Q Consensus 182 ~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~~---~-~~~~L~V~Visa~~l 257 (374)
+++|+||||||||||||.|++||||+|+|+.||+|||||||++||.. .|||..+. . -+.+|+|+||.|+.|
T Consensus 1003 ~pmWn~GsqmVALN~QTgDKpMQmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL 1077 (1267)
T KOG1264|consen 1003 FPMWNCGSQMVALNFQTGDKPMQMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHL 1077 (1267)
T ss_pred cccccccceeEEeeccCCCchhhhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeecccc
Confidence 99999999999999999999999999999999999999999999975 58886431 1 246799999999998
Q ss_pred ccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccC-cEEEEEeecCCccEEEEEEEeeCCCCCCCcc
Q 017257 258 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFG 335 (374)
Q Consensus 258 ~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wn-e~f~F~v~~pela~Lrf~V~D~d~~~~dd~i 335 (374)
+.. ..+..-|||+|+|.|.+.|..+++|++|.+ ++||+|| |+|+|.|.+|++|+|||.|+|.|+++...||
T Consensus 1078 ~k~-------gr~i~cPfVevEiiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~Fi 1150 (1267)
T KOG1264|consen 1078 PKL-------GRSIACPFVEVEIIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFL 1150 (1267)
T ss_pred ccC-------CCCccCCcEEEEEeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCccee
Confidence 631 124456899999999999999988887655 5899999 9999999999999999999999999988899
Q ss_pred EEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257 336 GQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 336 G~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
||+|+||.+|+.|||.|||.+.+.+.+..|+|||.|++
T Consensus 1151 aqA~yPv~~ik~GfRsVpLkN~ySEdlELaSLLv~i~m 1188 (1267)
T KOG1264|consen 1151 AQATYPVKAIKSGFRSVPLKNGYSEDLELASLLVFIEM 1188 (1267)
T ss_pred eeeecchhhhhccceeeecccCchhhhhhhhheeeeEe
Confidence 99999999999999999999999999999999999986
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=2.4e-54 Score=397.42 Aligned_cols=148 Identities=33% Similarity=0.473 Sum_probs=137.5
Q ss_pred ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||++||||+|++++ .+..+.||||++||||||||+|+++
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------------------------------------- 149 (258)
T cd08629 110 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------------------------------------- 149 (258)
T ss_pred HHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------------------------------------
Confidence 68999999999987 4557899999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
+++|||+|++|+++++|++|+.+...++..++++||||+++.+++++++.+|++|
T Consensus 150 -------------------------i~~eLs~l~~y~~~~~f~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~ 204 (258)
T cd08629 150 -------------------------LVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRH 204 (258)
T ss_pred -------------------------ccHHHHHHHHHhcCCCCCCccchhhcCCCcceecccCHHHHHHHHHHhHHHHHHh
Confidence 3578999999999999999998877455678999999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 205 n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08629 205 NVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN 258 (258)
T ss_pred chhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhchhcCC
Confidence 999999999999999999999999999999999999999999999999999987
No 10
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=9.3e-54 Score=394.67 Aligned_cols=147 Identities=33% Similarity=0.506 Sum_probs=134.6
Q ss_pred ChHHHhhccccCCCCC--CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPGSE--CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~--~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||++||||+||+++.+ ..+.||||++||||||||+|+++
T Consensus 110 ~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------------------------------------- 150 (258)
T cd08630 110 HLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------------------------------------- 150 (258)
T ss_pred HHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------------------------------------
Confidence 6899999999998754 36899999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
+++||++||+|+++++|++|+.+..... .++++||+|+++.+++++++.+|++
T Consensus 151 --------------------------i~~els~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~~v~ 203 (258)
T cd08630 151 --------------------------ISPELSALAVYCQATRLRTLEPAPVQPQ-PCQVSSLSERKAKKLIREAGNSFVR 203 (258)
T ss_pred --------------------------chHHHHhhHhhcccccCCCcchhhhcCC-CccccccCHHHHHHHHHHhHHHHHH
Confidence 4688999999999999999998753222 4589999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 204 ~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~N 258 (258)
T cd08630 204 HNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVN 258 (258)
T ss_pred hhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 11
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=5.1e-53 Score=389.22 Aligned_cols=147 Identities=31% Similarity=0.493 Sum_probs=134.7
Q ss_pred ChHHHhhccccCCCCC--CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPGSE--CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~--~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||++||||+|++++.+ ..+.||||++||||||||+|++
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~---------------------------------------- 149 (258)
T cd08631 110 HLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKI---------------------------------------- 149 (258)
T ss_pred HHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeeccc----------------------------------------
Confidence 6899999999998754 3589999999999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
++++||++|++|+++++|.+|+...... ..++|+||+|+++.+++++++.+|++
T Consensus 150 -------------------------~~~~eLs~L~~y~~~~~f~~~~~~~~~~-~~~~~~SlsE~~~~~l~~~~~~~~v~ 203 (258)
T cd08631 150 -------------------------RLSPELSDCVIYCKSVSFRSFTHSREHY-HFYEISSFTETKARKLIREAGNEFVQ 203 (258)
T ss_pred -------------------------cccHHHHHhHhhhcccccCCcccccccC-ccceecccCHHHHHHHHHhchHHHHH
Confidence 1368899999999999999998765432 25789999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 204 ~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 258 (258)
T cd08631 204 HNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDGLFRQN 258 (258)
T ss_pred HHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcchhcCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 12
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=8.7e-53 Score=387.50 Aligned_cols=146 Identities=34% Similarity=0.473 Sum_probs=133.0
Q ss_pred ChHHHhhccccCCCCCC--CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~--~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||+++|||+|++++.+. .+.||||++||||||||+|+.
T Consensus 110 ~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k---------------------------------------- 149 (257)
T cd08595 110 YLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK---------------------------------------- 149 (257)
T ss_pred HHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------------------------------------
Confidence 68999999999977443 589999999999999999851
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
+++|||+|++|+++++|++|..+..... .++++||+|+++.+++++++.+|++
T Consensus 150 --------------------------i~~els~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~~v~ 202 (257)
T cd08595 150 --------------------------IAKALSDLVIYTKSEKFCSFTHSRDNQH-SYENNSIGENKARKLLKSSGADFVG 202 (257)
T ss_pred --------------------------cChhHHHHhhhcCCcCCCCccccccccc-cceecccCHHHHHHHHHHhHHHHHH
Confidence 2468999999999999999887654432 5789999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 203 ~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~N 257 (257)
T cd08595 203 HTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNGKFLDN 257 (257)
T ss_pred HhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcCcccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 13
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=9.3e-53 Score=389.49 Aligned_cols=150 Identities=31% Similarity=0.442 Sum_probs=136.1
Q ss_pred ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+||.++ .+....||||++||||||||+|+++.
T Consensus 110 ~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------------------------------------- 150 (260)
T cd08597 110 YLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------------------------------------- 150 (260)
T ss_pred HHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------------------------------------
Confidence 68999999999987 44678999999999999999998730
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
.++++||++|++|+++++|.+|+...... ..++++||||+++.+++++++.+|++|
T Consensus 151 -----------------------~~~~~els~l~~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~v~~ 206 (260)
T cd08597 151 -----------------------RKLCKELSDLVSLCKSVRFQDFPTSAQNQ-KYWEVCSFSENLARRLANEFPEDFVNY 206 (260)
T ss_pred -----------------------ccccHHHHhhhhhhcCcccCCcccccccc-CcccccccCHHHHHHHHHHCHHHHHHH
Confidence 14578999999999999999988764332 356899999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 207 n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~F~~N 260 (260)
T cd08597 207 NKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGKFLEN 260 (260)
T ss_pred hhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhcccccCC
Confidence 999999999999999999999999999999999999999999999999999987
No 14
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.6e-52 Score=385.12 Aligned_cols=144 Identities=28% Similarity=0.406 Sum_probs=131.9
Q ss_pred ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||++||||+|++++.+ +...||||++||||||||+|+.
T Consensus 113 ~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~------------------------------------- 155 (261)
T cd08624 113 YCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKY------------------------------------- 155 (261)
T ss_pred HHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccc-------------------------------------
Confidence 6899999999998743 2479999999999999999963
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
+|||+|++|+++++|.+|+.+....+ .++++||+|+|+.+++++.+.+
T Consensus 156 -------------------------------~els~lv~y~~~~kf~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~ 203 (261)
T cd08624 156 -------------------------------EEMSSLVNYIQPTKFVSFEFSAQKNR-SYVISSFTELKAYDLLSKASVQ 203 (261)
T ss_pred -------------------------------ccchhhhcccCCcCCCCcccccccCC-cceeecccHHHHHHHHHHhHHH
Confidence 24778899999999999998876654 5689999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 204 fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 261 (261)
T cd08624 204 FVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPMQQNMALFEFN 261 (261)
T ss_pred HHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 15
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=1.9e-52 Score=342.39 Aligned_cols=115 Identities=45% Similarity=0.730 Sum_probs=109.7
Q ss_pred hcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCccccccccc
Q 017257 110 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 189 (374)
Q Consensus 110 s~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~ 189 (374)
|+||+||++++|++|+++....+ .++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 68999999999999999887544 57999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccccCCcceeeeeeecccccceeeeecCCCc
Q 017257 190 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 225 (374)
Q Consensus 190 QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~l 225 (374)
|||||||||.|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
No 16
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=4.1e-53 Score=348.98 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=94.3
Q ss_pred hhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCccccccc
Q 017257 108 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 187 (374)
Q Consensus 108 ~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~ 187 (374)
|||+||+|+++++|.+|........ .++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~~~-~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERKKQ-PWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHHTS-TTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhcCC-ccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 7999999999999999888655432 679999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeccccCCcceeeeeeecccccceeeeecCCCcc
Q 017257 188 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL 226 (374)
Q Consensus 188 G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr 226 (374)
|||||||||||.|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
No 17
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=5.8e-52 Score=380.34 Aligned_cols=143 Identities=35% Similarity=0.476 Sum_probs=129.1
Q ss_pred ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||+++|||+|++++ .+....||||++||+|||||+|++.
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~--------------------------------------- 150 (254)
T cd08633 110 YLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLS--------------------------------------- 150 (254)
T ss_pred HHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCc---------------------------------------
Confidence 68999999999876 3456899999999999999999752
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
++|++|++|+++++|.+|+.... ..+|++||+|+++.+++++++.+|++
T Consensus 151 ----------------------------~~Ls~l~~y~~~~~~~~~~~~~~---~~~~~~S~sE~k~~~l~~~~~~~~v~ 199 (254)
T cd08633 151 ----------------------------RALSDLVKYTKSVRVHDIETEAT---SSWQVSSFSETKAHQILQQKPAQYLR 199 (254)
T ss_pred ----------------------------hhhhHHhhhcccCCcCccccccc---cceeeecccHHHHHHHHHHCHHHHHH
Confidence 34677888888888888876432 35799999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 200 ~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 254 (254)
T cd08633 200 FNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSAN 254 (254)
T ss_pred hhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 18
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=5.2e-52 Score=383.90 Aligned_cols=147 Identities=34% Similarity=0.503 Sum_probs=134.8
Q ss_pred ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+|+++| ....+.||||++||+|||||+|++
T Consensus 110 ~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~----------------------------------------- 148 (257)
T cd08593 110 HLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKL----------------------------------------- 148 (257)
T ss_pred HHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEeccc-----------------------------------------
Confidence 68999999999977 344689999999999999999965
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
++++|||+|++|+++++|++|++.... ...++++||||+++.+++++++.+|++|
T Consensus 149 ------------------------~i~~els~L~~~~~~~k~~~~~~~~~~-~~~~~~~SlsE~k~~~~~~~~~~~lv~~ 203 (257)
T cd08593 149 ------------------------KLAKELSDLVIYCKSVHFKSFEHSKEN-YHFYEMSSFSESKALKLAQESGNEFVRH 203 (257)
T ss_pred ------------------------cccHHHHhhhhhcccccCCChhhhccc-CCCceeecCCHHHHHHHHHHhHHHHHHh
Confidence 135789999999999999999887743 3367999999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 204 n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~F~~N 257 (257)
T cd08593 204 NKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGLFRQN 257 (257)
T ss_pred hhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhchhcCC
Confidence 999999999999999999999999999999999999999999999999999987
No 19
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.9e-51 Score=376.17 Aligned_cols=142 Identities=30% Similarity=0.470 Sum_probs=126.9
Q ss_pred ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||++||||+|+.++ .+..+.||||++||||||||+|++
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~---------------------------------------- 149 (253)
T cd08632 110 YLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKL---------------------------------------- 149 (253)
T ss_pred HHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCC----------------------------------------
Confidence 68999999999865 345789999999999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
++||++|++|++++.|.++.+.. . .++++||||+++.+++++++.+|++
T Consensus 150 ---------------------------~~els~l~~~~~~~~~~~~~~~~--~--~~~~~SlsE~~~~~l~~~~~~~~v~ 198 (253)
T cd08632 150 ---------------------------CRDLSDLVVYTNSVAAQDIVDDG--S--TGNVLSFSETRAHQLVQQKAEQFMT 198 (253)
T ss_pred ---------------------------cHHHHhhhhhccCcccccchhcC--C--cccccccCHHHHHHHHHHhHHHHHH
Confidence 23577888888888877765432 2 3589999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 199 ~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g~F~~n 253 (253)
T cd08632 199 YNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRAKFMVN 253 (253)
T ss_pred HhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 20
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=2.2e-51 Score=377.59 Aligned_cols=140 Identities=36% Similarity=0.504 Sum_probs=127.7
Q ss_pred ChHHHhhccccCCCC-----CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGS-----ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-----~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||+++|||+||+++. .....||||++||||||||+|++
T Consensus 110 ~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~------------------------------------- 152 (254)
T cd08596 110 IFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA------------------------------------- 152 (254)
T ss_pred HHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------------------------------------
Confidence 689999999998762 23578999999999999999863
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
+|||+|++|+++++|++|.. +..+|++||+|+++.+++++++.+
T Consensus 153 -------------------------------~els~l~~y~~~~k~~~~~~-----~~~~~~~S~sE~~~~~~~~~~~~~ 196 (254)
T cd08596 153 -------------------------------PELSDLVIYCQAVKFPGLST-----PKCYHISSLNENAAKRLCRRYPQK 196 (254)
T ss_pred -------------------------------HHHHHHHHHhcCccCCCCCc-----cccceecccCHHHHHHHHHHCHHH
Confidence 45778899999999998873 236799999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus 197 lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 254 (254)
T cd08596 197 LVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHLNAAMFEAN 254 (254)
T ss_pred HHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHhhhchhcCC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 21
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=2.1e-51 Score=378.29 Aligned_cols=142 Identities=32% Similarity=0.524 Sum_probs=127.2
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+|+++|. .....||||++||||||||+|++
T Consensus 110 ~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~----------------------------------------- 148 (254)
T cd08628 110 VFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL----------------------------------------- 148 (254)
T ss_pred HHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------------------------------------
Confidence 689999999998764 45789999999999999999854
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecC--CcccccccCCCceEEeeccHHHHHHHHhhccccch
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKG--GLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV 157 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~--~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~ 157 (374)
+++|||+|++|++++.|. +|+. +..++++||+|+|+.+++++++.+|+
T Consensus 149 -------------------------~~~eLs~l~~y~~~~~~~~~~~~~-----~~~~~~~S~sE~k~~~~~~~~~~~~v 198 (254)
T cd08628 149 -------------------------IAIELSDLVVYCKPTSKTKDNLEN-----PDFKEIRSFVETKAPSIIRQKPVQLL 198 (254)
T ss_pred -------------------------CCHHHHhhHhhhcccccccCCccc-----ccccccccccHHHHHHHHHhHHHHHH
Confidence 257899999999887652 3322 23458999999999999999999999
Q ss_pred hccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 158 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 158 ~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
+||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 199 ~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~n 254 (254)
T cd08628 199 KYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254 (254)
T ss_pred HHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhhccCC
Confidence 99999999999999999999999999999999999999999999999999999987
No 22
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5.2e-51 Score=377.95 Aligned_cols=141 Identities=28% Similarity=0.422 Sum_probs=127.6
Q ss_pred ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||++||||+|++++.+ ....||||++||+|||||+|++
T Consensus 113 ~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~Kkl------------------------------------- 155 (258)
T cd08625 113 YCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKM------------------------------------- 155 (258)
T ss_pred HHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeec-------------------------------------
Confidence 5899999999998743 3579999999999999999854
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
|+||+|+++++|.+|+++..... .++|+||+|+|+.+++++++.+
T Consensus 156 ----------------------------------SdLvvy~~~vkf~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~ 200 (258)
T cd08625 156 ----------------------------------STLVNYIEPVKFKSFEAAAKRNK-FFEMSSFVETKAMEQLTKSPME 200 (258)
T ss_pred ----------------------------------ccccceecccccCCchhhhccCC-cceecCccHHHHHHHHHhCHHH
Confidence 24568899999999987665432 6789999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 201 ~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n 258 (258)
T cd08625 201 FVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258 (258)
T ss_pred HHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchhhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 23
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=6.3e-51 Score=375.36 Aligned_cols=141 Identities=29% Similarity=0.404 Sum_probs=128.0
Q ss_pred ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||++||||+||+++.+ ....||||++||+|||||+|++
T Consensus 113 ~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkL------------------------------------- 155 (258)
T cd08623 113 YCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKM------------------------------------- 155 (258)
T ss_pred HHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccch-------------------------------------
Confidence 6899999999998743 3479999999999999999853
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
|+|++|+++++|.+|+.+..... .++|+||+|+++.+++++++.+
T Consensus 156 ----------------------------------s~Lv~y~~~v~f~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~ 200 (258)
T cd08623 156 ----------------------------------SNLVNYIQPVKFESFEASKKRNK-SFEMSSFVETKGLEQLTKSPVE 200 (258)
T ss_pred ----------------------------------hcccccccCcccCCcccccccCC-CccccCccHHHHHHHHHhCHHH
Confidence 35778999999999988765433 5789999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 201 ~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~~ 258 (258)
T cd08623 201 FVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258 (258)
T ss_pred HHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcchhhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999999976
No 24
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.2e-50 Score=373.40 Aligned_cols=141 Identities=33% Similarity=0.465 Sum_probs=126.2
Q ss_pred ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||+++|||+||+++.+ ....||||++||||||||+|++
T Consensus 112 ~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~L------------------------------------- 154 (257)
T cd08626 112 YCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRL------------------------------------- 154 (257)
T ss_pred HHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccch-------------------------------------
Confidence 6899999999997743 2479999999999999999852
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
++|++|+++++|++|+.+.+..+ .++++||||+++.+++++++.+
T Consensus 155 ----------------------------------s~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~~~~~~~~~ 199 (257)
T cd08626 155 ----------------------------------SSLVNYAQPVKFQGFDVAEERNI-HFNMSSFNESVGLGYLKTSAIE 199 (257)
T ss_pred ----------------------------------hhhhcccccCCCCCcCchhhcCC-CccccccCHHHHHHHHHHHHHH
Confidence 34566777777888887765544 4689999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|||||||||+.+|++|||||||||||+|++||||+|||+.|
T Consensus 200 ~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~n 257 (257)
T cd08626 200 FVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGKFEYN 257 (257)
T ss_pred HHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhhccccCC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 25
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=2.2e-50 Score=371.64 Aligned_cols=141 Identities=34% Similarity=0.479 Sum_probs=127.2
Q ss_pred ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257 1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS 75 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
||++||||+|++++.+ ..+.||||++||||||||+|+
T Consensus 112 il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~-------------------------------------- 153 (257)
T cd08591 112 YCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKK-------------------------------------- 153 (257)
T ss_pred HHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeeccc--------------------------------------
Confidence 6899999999998743 247899999999999999985
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257 76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND 155 (374)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~ 155 (374)
||+|++|+++++|++|+...+..+ .++++||||+++.+++++++.+
T Consensus 154 ---------------------------------ls~L~~y~~~~~f~~~~~~~~~~~-~~~~~S~sE~~~~~~~~~~~~~ 199 (257)
T cd08591 154 ---------------------------------LSSLVNYIQPVKFQGFEVAEKRNK-HYEMSSFNESKGLGYLKKSPIE 199 (257)
T ss_pred ---------------------------------chhhhccccCCCCCCccchhhcCC-cceecccCHHHHHHHHHHHHHH
Confidence 345667778888888887765543 5799999999999999999999
Q ss_pred chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||++||+||||+|+|+|||||||+++|++|||||||||||+|++||||+|||++|
T Consensus 200 ~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N 257 (257)
T cd08591 200 FVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN 257 (257)
T ss_pred HHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHHhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999999987
No 26
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=3.4e-46 Score=338.89 Aligned_cols=118 Identities=36% Similarity=0.615 Sum_probs=108.6
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+||+++. ...+.||||++||||||||+|++
T Consensus 110 il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------------------------------------- 148 (229)
T cd08592 110 AFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------------------------------------- 148 (229)
T ss_pred HHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------------------------------------
Confidence 689999999999774 45789999999999999999831
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHH-hhccccchh
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAV-GTYGNDIVR 158 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~-~~~~~~~~~ 158 (374)
.++++||+|+++.+++ ++++.+|++
T Consensus 149 ------------------------------------------------------~~~~~S~~E~~~~~~~~~~~~~~~v~ 174 (229)
T cd08592 149 ------------------------------------------------------FYEMSSFPETKAEKYLNRQKGKIFLK 174 (229)
T ss_pred ------------------------------------------------------cccccCCcHHHHHHHHHHhhHHHHHH
Confidence 1357899999999999 478899999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus 175 ~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~N 229 (229)
T cd08592 175 YNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFMLN 229 (229)
T ss_pred hhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 27
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=6.7e-46 Score=335.64 Aligned_cols=116 Identities=42% Similarity=0.616 Sum_probs=109.0
Q ss_pred ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257 1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN 78 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (374)
||++||||+|++++ .+..+.||||++||||||||+|+
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------------------------------------- 148 (227)
T cd08594 110 YLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------------------------------------- 148 (227)
T ss_pred HHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------------------------------------
Confidence 68999999999865 34578999999999999999860
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257 79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158 (374)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~ 158 (374)
+|++||+|+++.+++++++.+|++
T Consensus 149 --------------------------------------------------------~~~~S~sE~~~~~~~~~~~~~~v~ 172 (227)
T cd08594 149 --------------------------------------------------------WQVSSFSETRAHQIVQQKAAQFLR 172 (227)
T ss_pred --------------------------------------------------------ceeccccHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 173 ~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~N 227 (227)
T cd08594 173 FNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRAKFRAN 227 (227)
T ss_pred hcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 28
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=4.2e-45 Score=331.59 Aligned_cols=116 Identities=39% Similarity=0.619 Sum_probs=109.5
Q ss_pred ChHHHhhccccCCCCCC-CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~-~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+||+++.+. ...||||++||||||||+|+
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------------------------------------ 147 (226)
T cd08558 110 ILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------------------------------------ 147 (226)
T ss_pred HHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------------------------------------
Confidence 68999999999988544 48999999999999999871
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
++++||+|+++.+++++++.+|++|
T Consensus 148 -------------------------------------------------------~~~~S~sE~~~~~~~~~~~~~l~~~ 172 (226)
T cd08558 148 -------------------------------------------------------YHMSSFSETKALKLLKESPEEFVKY 172 (226)
T ss_pred -------------------------------------------------------ceEeecCHHHHHHHHHHChHHHHHh
Confidence 4789999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
|++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus 173 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~n 226 (226)
T cd08558 173 NKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGKFEQN 226 (226)
T ss_pred cccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhcccccCC
Confidence 999999999999999999999999999999999999999999999999999976
No 29
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=6e-45 Score=331.60 Aligned_cols=120 Identities=35% Similarity=0.561 Sum_probs=109.4
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+||+++. +..+.||||++||||||||+|+. .
T Consensus 110 ~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----------------------------------- 149 (231)
T cd08598 110 IMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----------------------------------- 149 (231)
T ss_pred HHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----------------------------------
Confidence 689999999999884 44689999999999999999851 0
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~ 159 (374)
.. ..+++||+|+++.+++++++.+|++|
T Consensus 150 --------------------------------------------------~~--~~~~~S~sE~~~~~l~~~~~~~lv~~ 177 (231)
T cd08598 150 --------------------------------------------------KT--PNHIFSLSERSLLKLLKDKRAALDKH 177 (231)
T ss_pred --------------------------------------------------CC--CceeeccCHHHHHHHHHHHHHHHHHH
Confidence 00 12689999999999999999999999
Q ss_pred cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeeccc
Q 017257 160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA 212 (374)
Q Consensus 160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ 212 (374)
|++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++
T Consensus 178 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~ 230 (231)
T cd08598 178 NRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAMFAG 230 (231)
T ss_pred hhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhcccccC
Confidence 99999999999999999999999999999999999999999999999999985
No 30
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=7.6e-45 Score=328.72 Aligned_cols=117 Identities=35% Similarity=0.597 Sum_probs=105.1
Q ss_pred ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||++||||+||+++. .....||||++||||||||+|+..
T Consensus 110 ~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------------------------------------- 149 (229)
T cd08627 110 HFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------------------------------------- 149 (229)
T ss_pred HHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------------------------------------
Confidence 689999999999774 357899999999999999999641
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHh-hccccchh
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG-TYGNDIVR 158 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~-~~~~~~~~ 158 (374)
.+++||+|+++.+++. ..+.+|++
T Consensus 150 -------------------------------------------------------~~~~S~~E~ka~~~~~~~~~~~fv~ 174 (229)
T cd08627 150 -------------------------------------------------------RDMSSFPETKAEKYVNRSKGKKFLQ 174 (229)
T ss_pred -------------------------------------------------------cccCCcChHHHHHHHHhhhHHHHHH
Confidence 0146889999999885 45689999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeeccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA 212 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ 212 (374)
||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.
T Consensus 175 ~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~ 228 (229)
T cd08627 175 YNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFML 228 (229)
T ss_pred hcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCcccC
Confidence 999999999999999999999999999999999999999999999999999984
No 31
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=7.8e-45 Score=330.65 Aligned_cols=117 Identities=58% Similarity=0.992 Sum_probs=108.5
Q ss_pred ChHHHhhccccCCCCCC-CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257 1 MVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS 79 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~-~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
||+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 110 ~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------------------------------------- 148 (228)
T cd08599 110 ILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------------------------------------- 148 (228)
T ss_pred HHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------------------------------------
Confidence 68999999999987544 489999999999999998720
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHh-hccccchh
Q 017257 80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG-TYGNDIVR 158 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~-~~~~~~~~ 158 (374)
++++||+|+++.++++ +++.+|++
T Consensus 149 -------------------------------------------------------~~~~S~sE~~~~~l~~~~~~~~~v~ 173 (228)
T cd08599 149 -------------------------------------------------------VIRNSLSETQLKKVIEGEHPTDLIE 173 (228)
T ss_pred -------------------------------------------------------ccccCccHHHHHHHhhhhcHHHHHH
Confidence 3678999999999996 88899999
Q ss_pred ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257 159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
||++||+||||+|+|+|||||||+++|++|||||||||||+|++||||+|||+.|
T Consensus 174 ~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N 228 (228)
T cd08599 174 FTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRGKFRAN 228 (228)
T ss_pred HhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcccccCC
Confidence 9999999999999999999999999999999999999999999999999999987
No 32
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=99.95 E-value=1.5e-28 Score=233.19 Aligned_cols=143 Identities=20% Similarity=0.278 Sum_probs=110.4
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA 80 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
+|+++||++|++|+......+|||++|||||||++|+..... .. +.
T Consensus 116 ~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~-------------------~~---~~------------ 161 (274)
T cd00137 116 YCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSG-------------------PT---GS------------ 161 (274)
T ss_pred HHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCC-------------------Cc---cc------------
Confidence 378999999999876667889999999999999999863100 00 00
Q ss_pred CCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHH----HHhhccccc
Q 017257 81 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDI 156 (374)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~----~~~~~~~~~ 156 (374)
+ ....+.+|.......+ .++++|++|.++.. +..+...++
T Consensus 162 --~---------------------------------~~~~~~~~~~~~~~~~-~~~~~sqdE~k~~~~~K~~~i~~~~~~ 205 (274)
T cd00137 162 --S---------------------------------NDTGFVSFEFSTQKNR-SYNISSQDEYKAYDDEKVKLIKATVQF 205 (274)
T ss_pred --c---------------------------------cccCcCCcccccccCC-CceEEeechhhhcchhhHHHHHhHHHH
Confidence 0 0001222222222222 45789999999954 344456678
Q ss_pred hhccccceeeeecCCcc---------cCCCCCCccccccc---cceeeeeccccCCcceeeeeeecccc
Q 017257 157 VRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH---GAQMVAFNMQGHGRSLWLMHGMFRAN 213 (374)
Q Consensus 157 ~~~~~~~l~RvYP~g~R---------~~SSN~~P~~~W~~---G~QmvAlN~Qt~d~~m~ln~~~F~~n 213 (374)
+.||+++|+|+||+|+| ++||||+|+.+|++ |||||||||||.|++|+||+|+|+.|
T Consensus 206 ~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 206 VDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPAGCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred HhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence 89999999999999999 99999999999999 99999999999999999999999976
No 33
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.86 E-value=5.5e-21 Score=160.68 Aligned_cols=125 Identities=43% Similarity=0.657 Sum_probs=109.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC-CceeeeeeeccCCC-CCccCcEEEEEeecCCccEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~-d~~k~kTk~v~~~~-nP~Wne~f~F~v~~pela~Lrf~ 322 (374)
..|+|+|++|++|+.. .....+..||||+|++.+.+. +..+.||+++.++. ||.|||+|.|.+..++.++|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 5799999999999642 111245679999999988665 56778999988875 99999999999998888899999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
|||++.. ++++||++++++++|..||++++|++..|.+...++|+|+++++
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999877 79999999999999999999999999999988889999999985
No 34
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.81 E-value=3.7e-19 Score=148.56 Aligned_cols=103 Identities=26% Similarity=0.379 Sum_probs=84.1
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCC--CCceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 320 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~--~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr 320 (374)
+|+|+|++|++|+.. + .+.+||||+|++.|.. ....++||+++.+++||+|||+|.|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 489999999999631 2 2678999999998733 22345689999999999999999999974 3457899
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEcc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 355 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~ 355 (374)
|.|+|+|..+++++||++++|++++..+- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998764 466773
No 35
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.76 E-value=1.2e-17 Score=139.04 Aligned_cols=113 Identities=29% Similarity=0.410 Sum_probs=91.9
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|+|||+
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 7899999999863 1334678999999986532 3567999999999999999999998766667899999999
Q ss_pred CCCCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|.. ++++||++.++++.|..|.+ +++|.+. ..+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999999875 5566442 24567777765
No 36
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.75 E-value=1.6e-17 Score=139.76 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=93.6
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-----CCccEEEE
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 321 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-----pela~Lrf 321 (374)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 4799999999963 23456789999999853 56799999999999999999999876 34578999
Q ss_pred EEEeeCCCCCCCccEEEEEECcccc--Cc---ceEEEccCCCCCcc-CCeEEEEEEE
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 372 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~--~G---yR~vpL~d~~g~~~-~~~~L~v~i~ 372 (374)
.|||++..+++++||++.++++.+. .| .+|.+|.+..++.- ..+.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999987 45 47889987766433 3467887764
No 37
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.74 E-value=4.4e-17 Score=136.13 Aligned_cols=116 Identities=24% Similarity=0.372 Sum_probs=95.9
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+ ...+||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 37899999999863 23456789999999864 34679999999999999999999987654 679999999
Q ss_pred eCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
++..+++++||++.+++.++..|. .+++|.+..+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 998888999999999999998553 588999887744 35588888876
No 38
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.73 E-value=8.5e-17 Score=134.56 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.2
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
.+|.|+|++|++++. .+ .+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|+|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 46789999999954 5679999877 58999999999998654 35699999
Q ss_pred EeeCCCCCCCccEEEEEECc-cccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 324 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~-~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
||+|..++|++||.+.+||. .+..|. .|.+|...+|.+.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999998999999999996 687774 58899888887654 467776654
No 39
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.73 E-value=3e-17 Score=137.66 Aligned_cols=97 Identities=27% Similarity=0.390 Sum_probs=82.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ec--CCccEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~--pela~Lrf 321 (374)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 569999999999964 13 4578999999998766566788999999999999999999987 32 23468999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
.|||+|..+++++||++.+||+++..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999999765
No 40
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.72 E-value=2.2e-17 Score=136.69 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=81.5
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
...|+|+|+.|++++. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4679999999999851 134799999999642 22357799999999999999999999876665 57999
Q ss_pred EEEeeCCCCCCCccEEEEEECccc--cCcceE
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRA 351 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L--~~GyR~ 351 (374)
+|||+|.++++++||++.+|++.+ ..|.+|
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~ 114 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQ 114 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccc
Confidence 999999999999999999999975 566664
No 41
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.71 E-value=1.3e-16 Score=138.57 Aligned_cols=117 Identities=21% Similarity=0.338 Sum_probs=95.6
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 37899999999863 24456789999999964 5789999877 599999999999987665678999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc-------ceEEEccCCCC-----Cc-cCCeEEEEEEEE
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF 373 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G-------yR~vpL~d~~g-----~~-~~~~~L~v~i~f 373 (374)
|++..+++++||++.+||+.+..| -+|.||.+..| ++ ...+.|.|+|.|
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 999877899999999999998654 57899998765 22 345678888876
No 42
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.71 E-value=2e-16 Score=138.53 Aligned_cols=124 Identities=26% Similarity=0.388 Sum_probs=100.0
Q ss_pred eEEEEEEEeccccccCCCC-----------------C-------cccCCCCCCceEEEEEecCCCCceeeeeeeccCCCC
Q 017257 245 KTLKVTVYMGEGWYYDFPH-----------------T-------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~-----------------~-------~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~n 300 (374)
++|.|+|+.|++|+..... . .....+.+||||+|.+.+. ...||++++++.|
T Consensus 7 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~n 82 (158)
T cd04015 7 GTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSEN 82 (158)
T ss_pred eeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCCC
Confidence 5789999999999742100 0 0023456899999999652 3469999999999
Q ss_pred CccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 374 (374)
Q Consensus 301 P~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f~ 374 (374)
|+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++++..|. +|++|.+..|++.. ++.|.|+++|+
T Consensus 83 P~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 83 PVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 99999999988654 367999999999775 689999999999998876 68999999899876 58999999996
No 43
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.71 E-value=1.4e-16 Score=134.23 Aligned_cols=114 Identities=24% Similarity=0.310 Sum_probs=90.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|.|+|++|++++.- ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|+|||
T Consensus 1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 388999999994211 1134457889999999743 5779999999999999999999997655 589999999
Q ss_pred eCCCC------CCCccEEEEEECccccCcce---EEEccCCCCCcc-CCeEEE
Q 017257 326 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL 368 (374)
Q Consensus 326 ~d~~~------~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~-~~~~L~ 368 (374)
++..+ ++++||++.+||+.+..|.+ ++||.+.++... ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98763 79999999999999998864 789987664443 444553
No 44
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.70 E-value=1.6e-16 Score=133.90 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=91.7
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 322 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~ 322 (374)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 48999999999863 13345689999999865 4679999999999999999999987543 2579999
Q ss_pred EEeeCCCC-CCCccEEEEEECcccc-Cc---ceEEEccCCCCCccCCeEEEEEEEE
Q 017257 323 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 323 V~D~d~~~-~dd~iG~~~ipl~~L~-~G---yR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|||++..+ +++|||++.++++.+. .| ..|.+|..........+.|.+.+.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99998765 7999999999999987 45 4677887543222245678888776
No 45
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.70 E-value=1.2e-16 Score=134.47 Aligned_cols=106 Identities=21% Similarity=0.332 Sum_probs=85.1
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
...|.|+|++|++|+.. . ...+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999998642 1 12356899999999654333456799999999999999999999876544 47999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccC---cceEEEc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQ---GIRAVPL 354 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~---GyR~vpL 354 (374)
.|||+|..+++++||++.++|.++.. .-+|+||
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l 124 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPL 124 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEEC
Confidence 99999988889999999999999864 3467777
No 46
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.70 E-value=4.9e-17 Score=138.87 Aligned_cols=110 Identities=19% Similarity=0.180 Sum_probs=88.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|.|+|+.|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|+
T Consensus 15 ~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~~ 88 (136)
T cd08406 15 ERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRVT 88 (136)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEEE
Confidence 569999999999963 233467899999999865544457799999999999999999999865444 679999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCC
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGE 360 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~ 360 (374)
|||+|..+++++||++.|+..+..+|++|. .+++.-+.
T Consensus 89 V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~ 127 (136)
T cd08406 89 VAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRK 127 (136)
T ss_pred EEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCC
Confidence 999998889999999999998887887763 34443343
No 47
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.69 E-value=1.8e-16 Score=137.16 Aligned_cols=108 Identities=24% Similarity=0.279 Sum_probs=88.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-----------C
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 314 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-----------p 314 (374)
+|.|+|+.|++|+. ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 38999999999853 2356899999999876555567899999999999999999999851 1
Q ss_pred ----CccEEEEEEEeeCCCCCCCccEEEEEECccccCc----ceEEEccCCCCCc
Q 017257 315 ----ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 361 (374)
Q Consensus 315 ----ela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G----yR~vpL~d~~g~~ 361 (374)
+...|.|.|||++..++++|||++.||+..+..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2357999999999877899999999999999876 2578887655444
No 48
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.69 E-value=5.7e-16 Score=128.60 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=96.8
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+. .+..+..||||+|.+.+ ...+|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 58999999999863 23345689999999864 357999999999999999999997542 3679999999
Q ss_pred eCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEEC
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
++..+++++||++.+++..+..|. ++.+|.+..+.....++|.+.++|.
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998775 5779988776655677899998873
No 49
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.69 E-value=2.2e-16 Score=129.60 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=79.1
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH 324 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V~ 324 (374)
.|.|+|++|++|+... ........+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~--~~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLK--NMTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCcc--ccCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 5899999999996421 1011123479999999842 46799999999999999999999876554 47999999
Q ss_pred eeCCCCCCCccEEEEEECccccCcc
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
|+|..+++++||++.++|++|..||
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998876
No 50
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.69 E-value=4.8e-16 Score=131.74 Aligned_cols=122 Identities=25% Similarity=0.366 Sum_probs=94.5
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCC-C-CceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~-~-d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999863 2345678999999998642 1 12356899999999999999999998543 45789999
Q ss_pred EeeCCCCCCCccEEEEEECccccCcc---------eEEEccCCCCCccCCeEEEEEEEEC
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy---------R~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
||++..+++++||++.++++++..+- ++.+|....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 99998888999999999999986432 5668875433333466899998874
No 51
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.68 E-value=5.8e-16 Score=133.52 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=86.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|.|+|+.|++|+.. .+..+.+||||+|++........++||++++++.||+|||+|.|.+. ..-..|.|+||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999998531 12235689999999986444445789999999999999999999997 45568999999
Q ss_pred -eeCCCCCCCccEEEEEECccccCcc---eEEEccCC
Q 017257 325 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 357 (374)
Q Consensus 325 -D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~ 357 (374)
|++...+++|||++.|+|+.+..+. .|.+|.+.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~ 139 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPT 139 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCc
Confidence 5777778999999999999996553 46677754
No 52
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.68 E-value=3.1e-16 Score=132.56 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=81.3
Q ss_pred eEEEEEEEeccccccCCCCCcccC-CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~-~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
..|.|+|+.|++|+.. +. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 5799999999998631 22 256899999999765555567899999999999999999999865544 58999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccC
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
.|||++..+++++||++.|||+.+.-
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCccc
Confidence 99999988889999999999998854
No 53
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.68 E-value=1.7e-16 Score=133.54 Aligned_cols=98 Identities=18% Similarity=0.248 Sum_probs=81.5
Q ss_pred eEEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
..|.|+|+.|++|+.. +.. +.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 5699999999999641 222 56899999999765544557899999999999999999999865443 48999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
.|||+|..+++++||++.+||..+..+
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccC
Confidence 999999888899999999999998654
No 54
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.68 E-value=6e-16 Score=129.55 Aligned_cols=110 Identities=29% Similarity=0.413 Sum_probs=92.4
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|+|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 78999999998531 479999999853 467999999999999999999998766667899999999
Q ss_pred CCCCCCCccEEEEEECccccC--------cceEEEccCCCCCccCCeEEEEEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~--------GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
+.. ++++||++.++++.+.. ..+|.+|.+..+... .+.|.+.|+|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~~-~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGRV-GGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCcc-ceEEEEEEEe
Confidence 876 68999999999999864 248999998877444 4588888887
No 55
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.68 E-value=1.2e-15 Score=128.68 Aligned_cols=116 Identities=19% Similarity=0.273 Sum_probs=92.3
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|+|+|++|++|+. . +.+||||+|.+.+ ....||++ .++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~----~-----~~~DPYv~v~l~~----~~~~kT~v-~~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPV----K-----HVPHPYCVISLNE----VKVARTKV-REGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCC----C-----CCCCeeEEEEECC----EeEEEeec-CCCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 469999999999963 1 2469999999964 23468886 45789999999999876666667889999
Q ss_pred eeCCCCCCCccEEEEEECccccCcc---eEEEccCCCC-CccCCeEEEEEEEEC
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEFI 374 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g-~~~~~~~L~v~i~f~ 374 (374)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|.
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~ 123 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYS 123 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEE
Confidence 9998888999999999999999886 4778876543 122456899988874
No 56
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.67 E-value=2.7e-16 Score=129.45 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=84.8
Q ss_pred EEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 321 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf 321 (374)
.|+|+|++|++|+.. +.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 689999999999641 333 568999999986532 34579999999999999999999887653 368999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCcceEEEcc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 355 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~ 355 (374)
+|||+|..+++++||++.++++.|.+--+|.|++
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998766777764
No 57
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.67 E-value=2.7e-16 Score=133.27 Aligned_cols=103 Identities=15% Similarity=0.260 Sum_probs=83.3
Q ss_pred cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCC-CCccCcEEEEEeecCCcc-EEE
Q 017257 243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELA-LLR 320 (374)
Q Consensus 243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~-nP~Wne~f~F~v~~pela-~Lr 320 (374)
...+|+|+|+.|++|+.. .....+||||+|++.+.+.+..++||++++++. ||+|||+|.|+|..++.. .|.
T Consensus 12 ~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l~ 85 (135)
T cd08692 12 VNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQFL 85 (135)
T ss_pred cCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEEE
Confidence 346799999999999641 123456999999999888888889999999995 799999999999866553 577
Q ss_pred EEEEeeCCCCCCCccEEEEEECcccc-CcceE
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELK-QGIRA 351 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~-~GyR~ 351 (374)
+.|||++..+++++||++.++.++.. .|.+|
T Consensus 86 v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~h 117 (135)
T cd08692 86 IKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQ 117 (135)
T ss_pred EEEEeCCCCcCCceEEEEEECCccCCchhhhh
Confidence 88888887788999999999998743 34444
No 58
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.66 E-value=1.6e-15 Score=125.46 Aligned_cols=110 Identities=24% Similarity=0.350 Sum_probs=89.9
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|++|++|+.. +..+.+||||++.+.+ .+.||++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999641 2345689999999853 568999999999999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
+..+++++||++.++++++..+- .+++|.+. .+.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987654 35677654 2567777765
No 59
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.65 E-value=8.8e-16 Score=127.43 Aligned_cols=113 Identities=27% Similarity=0.324 Sum_probs=90.2
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|+||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 68999999999963 23456789999999865 4578998765 689999999999998766678999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc---ceEEEccCCCCCccCCeEEEEEEEE
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|++..+ +++||++.++++.+..| -.+.+|.+ .|+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 998766 89999999999998654 35678865 333 34578888876
No 60
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.65 E-value=1.9e-15 Score=127.19 Aligned_cols=116 Identities=25% Similarity=0.345 Sum_probs=91.9
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|++|++|+. ..+.+||||.+.+.+ ...++||++++++.||+|||+|.|.+. ++...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~-~~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELS-PNSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeC-CCCCEEEEEEEEC
Confidence 5799999999852 245789999999853 124679999999999999999999985 3346799999999
Q ss_pred CCCCCCCccEEEEEECccccCcc---eEEEccCCCCC-ccCCeEEEEEEEEC
Q 017257 327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEFI 374 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~-~~~~~~L~v~i~f~ 374 (374)
+..+++++||++.++++.|..+. .+.+|....++ .-..++|.+++.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 98888999999999999987543 45688765442 22356899999884
No 61
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.65 E-value=2.3e-15 Score=128.64 Aligned_cols=93 Identities=27% Similarity=0.389 Sum_probs=80.7
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
-+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+....|.|.|
T Consensus 14 ~G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V 82 (136)
T cd08375 14 IGRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITV 82 (136)
T ss_pred cEEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEE
Confidence 3679999999999853 23456789999999842 568999999999999999999999877778999999
Q ss_pred EeeCCCCCCCccEEEEEECccccC
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
||+|..+++++||++.+++.++..
T Consensus 83 ~D~d~~~~d~~lG~~~i~l~~l~~ 106 (136)
T cd08375 83 FDRDFFSPDDFLGRTEIRVADILK 106 (136)
T ss_pred EECCCCCCCCeeEEEEEEHHHhcc
Confidence 999988889999999999999874
No 62
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.65 E-value=4.6e-16 Score=133.08 Aligned_cols=113 Identities=20% Similarity=0.182 Sum_probs=86.4
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
...|.|+|+.|++|+.. ..+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 35699999999999642 1111233799999999864444457799999999999999999999876554 67999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCC
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGE 360 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~ 360 (374)
+|||+|..+++++||++.+++.+.-++.+|. .+++.-++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~ 129 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRR 129 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCC
Confidence 9999999999999999999998755555443 44443333
No 63
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.65 E-value=1.3e-15 Score=124.06 Aligned_cols=96 Identities=27% Similarity=0.362 Sum_probs=81.5
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++...|.|+|+|+
T Consensus 2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 7899999999964 13346789999999975 578999999999999999999999988888999999998
Q ss_pred CCCCCCCccEEEEEECccccCc-----ceEEEccC
Q 017257 327 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 356 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~d 356 (374)
+. +++||++.++|..|..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999998643 35777754
No 64
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.64 E-value=2.7e-15 Score=125.54 Aligned_cols=115 Identities=24% Similarity=0.315 Sum_probs=89.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|+|||
T Consensus 1 ~L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 38999999999853 23345689999999854 45789999999999999999999877666789999999
Q ss_pred eCCCCCCCccEEEEEECccccCc---ceEEEccCCCCCc----cCCeEEEEEE
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF 371 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~----~~~~~L~v~i 371 (374)
++..+++++||++.+++.++..+ ..|..|....... -..+.|.+.|
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 99888899999999999999654 3466666432221 1235666655
No 65
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.64 E-value=1.7e-15 Score=126.78 Aligned_cols=105 Identities=24% Similarity=0.338 Sum_probs=83.0
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-C--CccEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-p--ela~Lr 320 (374)
...|.|+|++|++|+. .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|+
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 3579999999999853 133467899999999765555567899999999999999999998643 2 236899
Q ss_pred EEEEeeCCCCCCCccEEEEEECcccc--CcceEEEc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL 354 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~--~GyR~vpL 354 (374)
|+|||++..+++++||++.++|+... .+-.|.+|
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 22345555
No 66
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.64 E-value=2.3e-15 Score=124.27 Aligned_cols=111 Identities=29% Similarity=0.464 Sum_probs=90.2
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|++|++++.. +..+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57899999998642 2345679999999965 2357999999999999999999998765557899999999
Q ss_pred CCCCCCCccEEEEEECccccCc---ceEEEccCCCCCccCCeEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 369 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~~~~~~L~v 369 (374)
+..+++++||++.+++..+..| .++++|....|.. .+.||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998765543 445653
No 67
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.64 E-value=4.1e-15 Score=125.22 Aligned_cols=110 Identities=26% Similarity=0.372 Sum_probs=91.8
Q ss_pred EEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCC
Q 017257 251 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 328 (374)
Q Consensus 251 Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~ 328 (374)
|++|++|+. ..+..||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|+|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888752 245689999999865 467999999999999999999998654 45789999999998
Q ss_pred CCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEEC
Q 017257 329 SEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 329 ~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
.+++++||++.++++.+..+.+ +.||.+..+.++. +.|.+.+.|.
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~ 116 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQ 116 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEe
Confidence 8889999999999999987654 6899998888765 5888888773
No 68
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.64 E-value=1.2e-15 Score=125.32 Aligned_cols=99 Identities=25% Similarity=0.315 Sum_probs=83.0
Q ss_pred EEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCcc-CcEEEEEeecCCc--cEEEEE
Q 017257 247 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pel--a~Lrf~ 322 (374)
|+|+|++|++|+.. + ..+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|+
T Consensus 1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 57999999998631 2 135679999999854 6789999999999999 9999999977654 589999
Q ss_pred EEeeCCCCCCCccEEEEEECccccC---cc---eEEEccC
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD 356 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~---Gy---R~vpL~d 356 (374)
|||++..+++++||++.+++.+|.. ++ +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999976 33 4788876
No 69
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.64 E-value=5e-16 Score=132.50 Aligned_cols=112 Identities=21% Similarity=0.186 Sum_probs=89.8
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|+
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~~ 88 (136)
T cd08404 15 NRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEFL 88 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEEE
Confidence 569999999999863 234567899999999754333456799999999999999999999865443 468999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 362 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~~~ 362 (374)
|||+|..+++++||++.+++.+...|+++. .|.+..|+++
T Consensus 89 v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 89 VLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 999998888999999999999976666654 5666667664
No 70
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.63 E-value=1.6e-15 Score=131.64 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=83.1
Q ss_pred EEEEEEEeccccccCCCCC--------cccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-
Q 017257 246 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 316 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~--------~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel- 316 (374)
+|.|+|+.|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|..
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999997521000 001224579999999876 35689999999999999999999877765
Q ss_pred cEEEEEEEeeCCCCCCCccEEEEEECccccC-c---------ceEEEccCC
Q 017257 317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR 357 (374)
Q Consensus 317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~-G---------yR~vpL~d~ 357 (374)
..|.|+|||+|..+++++||++.+++.+|.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998753 2 266777654
No 71
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.63 E-value=1.6e-15 Score=127.46 Aligned_cols=97 Identities=21% Similarity=0.329 Sum_probs=80.5
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
..|.|+|+.|++|+.. +..+.+||||+|.+...... ..++||++++++.||+|||+|.|++...++ ..|+|
T Consensus 14 ~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~~ 87 (124)
T cd08680 14 SSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQV 87 (124)
T ss_pred CEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEEE
Confidence 5699999999999631 23456899999999754332 357899999999999999999999876655 48999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccC
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
+|||++..+++++||++.|+++.+..
T Consensus 88 ~V~~~~~~~~~~~lG~~~i~L~~~~~ 113 (124)
T cd08680 88 DVCSVGPDQQEECLGGAQISLADFES 113 (124)
T ss_pred EEEeCCCCCceeEEEEEEEEhhhccC
Confidence 99999988889999999999998843
No 72
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.63 E-value=2.5e-15 Score=125.85 Aligned_cols=97 Identities=24% Similarity=0.311 Sum_probs=80.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|+|+|++|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|.
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~ 87 (124)
T cd08385 16 NQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVFS 87 (124)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEEE
Confidence 579999999999863 12345689999999964 33356799999999999999999999876544 489999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
|||++..+++++||++.++++.+..|.
T Consensus 88 V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 88 VYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEeCCCCCCCceeEEEEEecCcccCCC
Confidence 999998888999999999999986664
No 73
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.62 E-value=4.8e-15 Score=124.29 Aligned_cols=113 Identities=20% Similarity=0.365 Sum_probs=89.8
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|++|++|+. .+..+.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|+|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 7899999999853 23456789999999865 356799999999999999999999854 56899999999
Q ss_pred CCCCC--CCccEEEEEECccccC----cceEEEccCCCCCc--cCCeEEEEEE
Q 017257 327 DMSEK--DDFGGQTCLPVSELKQ----GIRAVPLHDRKGER--YKSVKLLMHF 371 (374)
Q Consensus 327 d~~~~--dd~iG~~~ipl~~L~~----GyR~vpL~d~~g~~--~~~~~L~v~i 371 (374)
+..++ ++|||++.++++.|.. +..|++|.+..... ...++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87664 5799999999999742 36789997766432 2345787765
No 74
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.62 E-value=2e-15 Score=126.00 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=80.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 323 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V 323 (374)
..|.|+|+.|++|+. .+ .+.+||||+|.+...+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 569999999999853 13 356899999999865555567799999999999999999999865443 4688999
Q ss_pred EeeCCCC-CCCccEEEEEECccccCcc
Q 017257 324 HEYDMSE-KDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 324 ~D~d~~~-~dd~iG~~~ipl~~L~~Gy 349 (374)
||++... ++++||.+.||+.++..|-
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~ 111 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQK 111 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence 9988764 4789999999999997553
No 75
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.62 E-value=1.3e-15 Score=131.39 Aligned_cols=92 Identities=28% Similarity=0.454 Sum_probs=80.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|+|+|+.|.+|.. .|..+.+||||.+++.+ ++.||+++.+|.||+|||+|.|.+..|. ..|.++||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~~-~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDPN-TPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCCC-ceEEEEEE
Confidence 568999999999853 34446789999999875 6889999999999999999999998875 57999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|+|.++.|||+|.++||+..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
No 76
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.62 E-value=4.7e-15 Score=125.04 Aligned_cols=93 Identities=29% Similarity=0.371 Sum_probs=78.6
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEee-cCCccEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIE 322 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~-~pela~Lrf~ 322 (374)
..+|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|... .+....|+|+
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 4689999999999852 2346689999999865 2789999999999999999999753 3456789999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|||++..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999976655
No 77
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.61 E-value=1e-15 Score=130.53 Aligned_cols=111 Identities=20% Similarity=0.245 Sum_probs=88.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|+
T Consensus 15 ~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~ 88 (136)
T cd08402 15 GKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIVT 88 (136)
T ss_pred CeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEEE
Confidence 579999999999863 233567899999999754444456789999999999999999999865554 479999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER 361 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~ 361 (374)
|||++..+++++||++.+++.+...++.| .+|+...+++
T Consensus 89 v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~ 128 (136)
T cd08402 89 VLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRP 128 (136)
T ss_pred EEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCe
Confidence 99999888899999999999988766643 4665554444
No 78
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.61 E-value=4.3e-15 Score=124.80 Aligned_cols=98 Identities=29% Similarity=0.367 Sum_probs=81.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|+|+|++|++|+.. +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|.
T Consensus 16 ~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i~ 89 (127)
T cd04030 16 QKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDVA 89 (127)
T ss_pred CEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEEE
Confidence 5799999999999642 33467899999999765444567899999999999999999999865433 589999
Q ss_pred EEeeCCC--CCCCccEEEEEECccccCc
Q 017257 323 VHEYDMS--EKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 323 V~D~d~~--~~dd~iG~~~ipl~~L~~G 348 (374)
|||++.. +++++||++.++|..|..+
T Consensus 90 v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 90 VKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEECCcccCCCCceEEEEEEeccccccc
Confidence 9998864 5799999999999998654
No 79
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.61 E-value=5e-15 Score=121.81 Aligned_cols=97 Identities=21% Similarity=0.180 Sum_probs=81.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC----ccEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALLR 320 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe----la~Lr 320 (374)
..|+|+|++|++|+ .+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+. -+.|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 56899999999984 23579999999975 4678999999999999999999986554 25799
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcc------eEEEccC
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHD 356 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy------R~vpL~d 356 (374)
|.|||++..+++++||++.++|+.+..+. +|++|.|
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~ 110 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTD 110 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeC
Confidence 99999998888999999999999996653 4677765
No 80
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.61 E-value=1.4e-14 Score=120.34 Aligned_cols=117 Identities=25% Similarity=0.319 Sum_probs=89.6
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+...........+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|+|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999986421000000124689999999864 56899999999999999999999876556789999999
Q ss_pred eCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
++.. ++++||++.++++.+..+- .|++|.+. ..+.|.++++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 7999999999999986542 67888764 33567777764
No 81
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.61 E-value=1.4e-14 Score=121.65 Aligned_cols=117 Identities=22% Similarity=0.325 Sum_probs=92.7
Q ss_pred EEEEEEEeccccccCCCCCcccC--CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~--~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
.|+|+|++|++|+.. +. .+.+||||.|.+.+ .+++|++++++.||.|||+|.|.+..+....|.|+|
T Consensus 2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 589999999998631 22 45689999999743 568999999999999999999999875567899999
Q ss_pred EeeCCCCCCCccEEEEEECcccc----Cc--ceEEEccCCCCC--ccCCeEEEEEEEE
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 373 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~----~G--yR~vpL~d~~g~--~~~~~~L~v~i~f 373 (374)
||++..+++++||++.+++..+. .| -.|++|.+.... ....+.|.+++.+
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998878999999999999985 23 357888876322 2245678887753
No 82
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.60 E-value=4.7e-15 Score=124.28 Aligned_cols=97 Identities=23% Similarity=0.343 Sum_probs=80.5
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|.|+|++|++|+. .+..+.+||||+|.+. +.....+||++++++.||+|||+|.|.+...++ ..|+|+
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i~ 87 (124)
T cd08387 16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEVL 87 (124)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEEE
Confidence 579999999999863 2334568999999995 333456899999999999999999999865543 479999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
|||++..+++++||++.++++++..+-
T Consensus 88 V~d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 88 LYDFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred EEECCCCCCCceeEEEEEecccccCCC
Confidence 999998888999999999999997654
No 83
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.60 E-value=6.3e-15 Score=123.04 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=80.6
Q ss_pred ceEEEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr 320 (374)
...|+|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35799999999999642 2 2356899999998653333356899999999999999999999865443 5799
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|.|||++..+++++||++.++|+.+..|
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEeccccccc
Confidence 9999999888899999999999999654
No 84
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.60 E-value=6.2e-15 Score=124.62 Aligned_cols=96 Identities=22% Similarity=0.293 Sum_probs=77.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEE-EeecCCc--cEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPEL--ALLR 320 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F-~v~~pel--a~Lr 320 (374)
.+|+|+|++|++|+.. +.. +.+||||+|.+.. .+..+.||++++++.||+|||+|.| .+...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 5799999999999642 222 5689999999863 3345679999999999999999999 3432222 4699
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|.|||+|..+++++||++++||+++..+
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~~~ 115 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGADLL 115 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccCCC
Confidence 9999999888899999999999998543
No 85
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.60 E-value=2.3e-15 Score=127.68 Aligned_cols=112 Identities=18% Similarity=0.255 Sum_probs=86.5
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
...|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 3679999999999863 233457899999999764444456799999999999999999999876554 47999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGER 361 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~ 361 (374)
.|||+|..+++++||++.+++.+..+.. .|..++..-+++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~ 126 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKK 126 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCC
Confidence 9999998888999999999998743322 233454444444
No 86
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.60 E-value=2.3e-14 Score=120.24 Aligned_cols=113 Identities=20% Similarity=0.308 Sum_probs=86.9
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .....||++++++.||.|||+|.|.+..+....|.|+|||
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 58999999999864 233567899999986532 1345799999999999999999999877656789999999
Q ss_pred eCCCCCCCccEEEEEECccccC---cc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~---Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
++..+++++||++.++|+.+.. |. +|++|.. . +.|.+.+.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence 9988789999999999987643 32 4677742 3 355555544
No 87
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.60 E-value=6.8e-15 Score=125.08 Aligned_cols=96 Identities=26% Similarity=0.449 Sum_probs=79.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--CceeeeeeeccCCCCCccCcEEEEEeecC----CccE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL 318 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--d~~k~kTk~v~~~~nP~Wne~f~F~v~~p----ela~ 318 (374)
..|+|+|++|++|+.. +..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 5699999999999631 3345689999999975432 24578999999999999999999998652 2468
Q ss_pred EEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257 319 LRIEVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
|.|.|||++..+++++||++.++|++|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
No 88
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.59 E-value=2e-14 Score=120.24 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.0
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|+.|++|+. .+..+..||||+|.+.+ ....||++++++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 7899999999853 23346789999999864 2346999999999999999999988543 46899999999
Q ss_pred CCCCCCCccEEEEEECccccCc----ceEEEccCCCCCccCCeEEEEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE 372 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~G----yR~vpL~d~~g~~~~~~~L~v~i~ 372 (374)
+..+++++||++.+++..+..+ ..|++|....+..-..+.|.+.+.
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999999887643 358888653322223346665543
No 89
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.59 E-value=2.3e-15 Score=127.95 Aligned_cols=113 Identities=19% Similarity=0.200 Sum_probs=88.2
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf 321 (374)
...|+|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3579999999999863 234567899999998643333456789999999999999999999764433 46899
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCcc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 362 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~~ 362 (374)
+|||++..+++++||++.+++....+|+++ ..+....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 999999888899999999999877777754 35555556553
No 90
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.59 E-value=2.7e-14 Score=119.52 Aligned_cols=115 Identities=19% Similarity=0.290 Sum_probs=87.8
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|+.|.+|+.. . ...+..||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~---~--~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR---S--GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC---C--CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 68999999999641 1 1134679999999843 2357899999999999999999998643 36899999999
Q ss_pred CCCCCCCccEEEEEECccccCcc---eEEEccC--CCCCccCCeEEEEEEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHD--RKGERYKSVKLLMHFEF 373 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d--~~g~~~~~~~L~v~i~f 373 (374)
+..+++++||.+.++++.+..|. .|.+|.- ..++ ..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~--~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSE--VQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCc--ccEEEEEEEEC
Confidence 98888999999999999997543 4777753 2222 35677666553
No 91
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.59 E-value=2.9e-15 Score=127.79 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=84.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|+
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999863 234567899999998532222345789999999999999999999865555 469999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCc--ceEEEccCCCCCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY 362 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~G--yR~vpL~d~~g~~~ 362 (374)
|||+|..+++++||++.|........ -.|-.|++..+.++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555432 23445555555543
No 92
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.59 E-value=3.1e-14 Score=120.76 Aligned_cols=116 Identities=24% Similarity=0.210 Sum_probs=88.3
Q ss_pred eEEEEEEEeccccccCCCCCc--c--cCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 320 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~--~--~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lr 320 (374)
..|+|+|+.|++|........ . ...+..||||+|.+.+ ....+|++++++.||.|||+|+|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 569999999999853100000 0 0124679999999864 23468999999999999999999986 457899
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccC-----cceEEEccCCCCCccCCeEEEEEEEE
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~-----GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|.|+|++..+.+++||++.++|+++.. +..|++|. +.+.|.|++.+
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence 999999887788999999999999876 24678884 24577777765
No 93
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.58 E-value=3.3e-14 Score=119.93 Aligned_cols=114 Identities=29% Similarity=0.413 Sum_probs=89.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++|+. .+..+..||||+|.+.+ ...+|+++.++.||.|||+|.|.+..+. ..|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~~-~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNSS-DRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCCC-CEEEEEEEE
Confidence 58999999999864 23356789999999843 4679999999999999999999886553 579999999
Q ss_pred eCCC-----------CCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEE
Q 017257 326 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 371 (374)
Q Consensus 326 ~d~~-----------~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i 371 (374)
+|.. +.+++||++.+++.++..+. .|.+|....+.....+.|.+++
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 9842 46899999999999886544 5778876555544456777764
No 94
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.58 E-value=8.6e-15 Score=122.78 Aligned_cols=107 Identities=27% Similarity=0.332 Sum_probs=87.4
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCC----ccEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 320 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pe----la~Lr 320 (374)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 489999999998642 3346789999999975 34678998865 689999999999997774 47899
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcce--------EEEccCCCCCcc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR--------AVPLHDRKGERY 362 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~GyR--------~vpL~d~~g~~~ 362 (374)
|+|||++..+.+++||++.+|+.++..+.+ +.+|.+..|++-
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~ 120 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQ 120 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcC
Confidence 999999877779999999999999976553 468888887763
No 95
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.57 E-value=2.1e-14 Score=120.39 Aligned_cols=98 Identities=21% Similarity=0.277 Sum_probs=79.3
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr 320 (374)
...|.|+|++|++|+. .+..+..||||+|.+.. .+..+.||++++++.||+|||+|.|.+.. .....|.
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 3579999999999863 23345689999999853 33456899999999999999999997532 1235799
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
|+|||+|..+++++||++.++++.+..|.
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~ 115 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTE 115 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCCC
Confidence 99999998888999999999999997664
No 96
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.57 E-value=1.7e-14 Score=120.28 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=82.3
Q ss_pred EEeccccccCCCCCcccCCCCCCceEEEEEecCC--CCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCC
Q 017257 251 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 328 (374)
Q Consensus 251 Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~--~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~ 328 (374)
.|+|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|||+|.|.+..++...|+|+|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888853 2335678999999998754 23346899999999999999999999877777889999999997
Q ss_pred ----CCCCCccEEEEEECccccCcc---eEEEccCCCC
Q 017257 329 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 359 (374)
Q Consensus 329 ----~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g 359 (374)
.+++++||++.+++++|..+- ...+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 678999999999999997543 3557755444
No 97
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.57 E-value=9.9e-14 Score=116.81 Aligned_cols=116 Identities=20% Similarity=0.247 Sum_probs=89.5
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 468999999999853 23456789999998764 468999999999999999999987655 467999999
Q ss_pred eeCCCCCCCccEEEEEECccccC-cceEEEccCCCC--CccCCeEEEEEEEE
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQ-GIRAVPLHDRKG--ERYKSVKLLMHFEF 373 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~-GyR~vpL~d~~g--~~~~~~~L~v~i~f 373 (374)
|++... +++||.+.++++.+.. .+++++|..... .-...++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVPGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCCCEEEEEEEE
Confidence 998764 8999999999997754 467888853221 11234577777654
No 98
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.57 E-value=4.4e-15 Score=126.57 Aligned_cols=112 Identities=18% Similarity=0.179 Sum_probs=86.2
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--ccEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--la~Lrf~ 322 (374)
.+|.|+|++|++|+. .+..+..||||+|.+........+.||++++++.||+|||+|.|.+...+ ...|.|+
T Consensus 15 ~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~~ 88 (136)
T cd08405 15 NRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLIIT 88 (136)
T ss_pred CeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEEE
Confidence 579999999999853 23456789999999864333334679999999999999999999986433 3579999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 362 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~ 362 (374)
|||++..+++++||++.+++.+..... .|..|...-+.++
T Consensus 89 v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 89 VMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 999998888999999999999874433 3445655555543
No 99
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.57 E-value=4.4e-14 Score=117.89 Aligned_cols=119 Identities=22% Similarity=0.218 Sum_probs=92.2
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
+.|+|+|++|++|+.. ....+.+||||+|.+.+. ....+|+++.++.||.|||.|.|.+. +....|.|+||
T Consensus 2 g~l~v~v~~a~~L~~~-----~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS-----DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc-----cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 4689999999998631 012245799999999752 35679999999999999999999987 44568999999
Q ss_pred eeCCCCCCCccEEEEEECccccCcceE---EEccCCCCCccCCeEEEEEEEEC
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~GyR~---vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
|++..+++++||++.+++.++..+..+ ...+...|++ .+.|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 999887899999999999999865432 2333455554 46888888885
No 100
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.56 E-value=2.1e-14 Score=120.69 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=80.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCC--ccEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pe--la~Lrf 321 (374)
..|.|+|+.|++|+.. +..+..||||++.+.+. ...++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp~--~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLPS--KKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCch------hcCCCCCcEEEEEEccC--CcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 5799999999999641 23455799999887643 346789999887 999999999998 54333 367999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCcc---eEEEc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 354 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL 354 (374)
+|||++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997653 34454
No 101
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.56 E-value=3e-14 Score=120.57 Aligned_cols=110 Identities=30% Similarity=0.416 Sum_probs=89.3
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC-ccEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 323 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe-la~Lrf~V 323 (374)
..|+|+|++|++|+.. +..+.+||||+|.+.+.+.+..++||++++++.||.|||+|.|.+..++ ...|.|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 5689999999998642 2235689999999987666667889999999999999999999987553 35899999
Q ss_pred EeeCCCCCCCccEEEEEECccccCc--ceEEEccCCC-CC
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK-GE 360 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~~G--yR~vpL~d~~-g~ 360 (374)
||++..+++++||++.++++++... -.|.+|.+.. |+
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~~~~ 126 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQEEGE 126 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCccccc
Confidence 9998877899999999999998643 3577887644 44
No 102
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.56 E-value=2.4e-14 Score=125.86 Aligned_cols=97 Identities=22% Similarity=0.248 Sum_probs=79.6
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC-Cc--cEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p-el--a~Lr 320 (374)
...|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 46799999999999642 335678999999996544445678999999999999999999986432 22 4799
Q ss_pred EEEEeeCCCCCCCccEEEEEECcccc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
|.|||++..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
No 103
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.56 E-value=7.9e-14 Score=118.81 Aligned_cols=114 Identities=23% Similarity=0.417 Sum_probs=87.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-C--------Cc
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 316 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-p--------el 316 (374)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999863 23456789999999864 47899999999999999999997532 1 12
Q ss_pred cEEEEEEEeeCCCCCCCccEEEEE-ECccccC------cceEEEccCCCCCccCCeEEEEEEEE
Q 017257 317 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ------GIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 317 a~Lrf~V~D~d~~~~dd~iG~~~i-pl~~L~~------GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
..|.|+|||+|..+++++||++.+ |+..++. --+|.+|... |. ..+.|+|.|++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~~-~~--~~Geil~~~~~ 131 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYKG-GQ--SAGELLAAFEL 131 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeecC-CC--chhheeEEeEE
Confidence 568999999998888999999986 6666652 2268888633 32 34578887775
No 104
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.55 E-value=2.9e-14 Score=119.05 Aligned_cols=103 Identities=19% Similarity=0.233 Sum_probs=82.6
Q ss_pred ceEEEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr 320 (374)
...|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 35799999999998631 2 345689999999853 33446789999999999999999999876543 4799
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 354 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL 354 (374)
|.|||++..+++++||++.++|+++.... .|.+|
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 99999998878999999999999987654 45565
No 105
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.55 E-value=3.7e-14 Score=119.15 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=77.5
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|.|++|++|+. .+..+.+||||+|.+.+. ....||++++++.||+|||+|.|.+..++.+.|.|+|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999863 234567899999998653 2346788889999999999999998878778999999999
Q ss_pred CCCCCCCccEEEEEECcccc
Q 017257 327 DMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~ 346 (374)
|..+++++||++.+++....
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999999775
No 106
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.54 E-value=1.6e-13 Score=119.40 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=88.2
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--------ccE
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 318 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--------la~ 318 (374)
..++|..|.+++++ ..+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 34566666665432 122234579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEeeCCC-CCCCccEEEEEECccccCc--c-eEEEccCCCCCccCCeEEEEEEEE
Q 017257 319 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 319 Lrf~V~D~d~~-~~dd~iG~~~ipl~~L~~G--y-R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|.|+|||++.+ .+|++||++.++|+.|..+ . .+++|++ |....|+.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 89999999875 4699999999999999544 3 4679986 444567788888753
No 107
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.54 E-value=2.4e-14 Score=122.40 Aligned_cols=97 Identities=25% Similarity=0.314 Sum_probs=78.3
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|.|+|++|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 15 ~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~~ 87 (137)
T cd08409 15 NRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSLS 87 (137)
T ss_pred CeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEEE
Confidence 579999999999863 12 456899999999864333346799999999999999999999865444 689999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|||++..+++++||++.++......|
T Consensus 88 V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 88 VMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEeCCCCCCcceEEEEEECCcccCCC
Confidence 99999888899999999997655444
No 108
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.54 E-value=4e-14 Score=118.47 Aligned_cols=99 Identities=24% Similarity=0.355 Sum_probs=80.3
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ecCCc--cEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~pel--a~Lr 320 (374)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+....||++++++.||+|||+|.|.. ...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 3579999999999863 2334578999999997655555678999999999999999999963 33333 4799
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
|+|||++.. .+++||++.+++++|..+-
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 999999877 7899999999999998763
No 109
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.53 E-value=4e-14 Score=121.24 Aligned_cols=98 Identities=18% Similarity=0.252 Sum_probs=79.6
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 320 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr 320 (374)
..+|.|+|+.|.+|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 3579999999999863 234457899999999743221 246799999999999999999999875444 5899
Q ss_pred EEEEeeCCCCCCCccEEEEEECccccC
Q 017257 321 IEVHEYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 321 f~V~D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
|+|||++..+++++||++.+++.....
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~ 114 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGE 114 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCc
Confidence 999999988889999999999987654
No 110
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.53 E-value=1.8e-14 Score=121.95 Aligned_cols=112 Identities=20% Similarity=0.189 Sum_probs=89.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--ccEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--la~Lrf~ 322 (374)
..|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 5799999999998642 2345689999999986544445679999999999999999999987654 3689999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCcc
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 362 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~ 362 (374)
|||.+..+++++||++.+++++...+. .|.+|++..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 999998778999999999999933333 3557777766654
No 111
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.53 E-value=6.7e-14 Score=120.79 Aligned_cols=91 Identities=30% Similarity=0.434 Sum_probs=77.9
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
+.|+|+|++|.+|+. .+. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|+||
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 468999999999863 122 5689999999853 578999999999999999999999776 567999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|++..+++++||++.+++..|..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999988654
No 112
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.50 E-value=3.8e-13 Score=114.98 Aligned_cols=94 Identities=21% Similarity=0.326 Sum_probs=75.3
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--------CceeeeeeeccCCCCCcc-CcEEEEEeecCCc
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL 316 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--------d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pel 316 (374)
.++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36899999999842 3357899999999974322 234789999999999999 99999998533
Q ss_pred cEEEEEEEeeCCCCC---CCccEEEEEECccccCc
Q 017257 317 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG 348 (374)
Q Consensus 317 a~Lrf~V~D~d~~~~---dd~iG~~~ipl~~L~~G 348 (374)
..|.|+|||++..++ +++||++.+|+++|..|
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~ 107 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLER 107 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhccc
Confidence 479999999875433 69999999999999755
No 113
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.50 E-value=1.6e-13 Score=117.29 Aligned_cols=104 Identities=29% Similarity=0.355 Sum_probs=84.4
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC------------
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 314 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p------------ 314 (374)
|+|+|+.|++|+.. ..+..||||+|.+.+. ....+++|+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~~-~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNYS-SKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEecC-CcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999998531 2356899999998752 334678999999999999999999998754
Q ss_pred ---CccEEEEEEEeeCCCCCCCccEEEEEECccccCc---ceEEEccCCC
Q 017257 315 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 358 (374)
Q Consensus 315 ---ela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~ 358 (374)
.-..|.|.|||++..++++|||++.+++..+..+ .+|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 4678886553
No 114
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.50 E-value=1.4e-13 Score=113.78 Aligned_cols=92 Identities=26% Similarity=0.360 Sum_probs=71.8
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|.+|++|. +..||||++++.+......+.||++++++.||+|||+|.|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 579999999983 23799999998753322457899999999999999999999863 44899999998
Q ss_pred -------CCCCCCCccEEEEEECc--ccc-CcceE
Q 017257 327 -------DMSEKDDFGGQTCLPVS--ELK-QGIRA 351 (374)
Q Consensus 327 -------d~~~~dd~iG~~~ipl~--~L~-~GyR~ 351 (374)
|..+.|+++|.+.+.|+ .+. .|+.-
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 45577999988777765 443 36643
No 115
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.48 E-value=5.5e-13 Score=114.85 Aligned_cols=115 Identities=17% Similarity=0.313 Sum_probs=93.1
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
...|.|.|+.|++|+. ..+|||+|.+.| ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 3569999999999963 127899999986 2346999999999999999999976443 56689999
Q ss_pred EeeCC-CC---CCCccEEEEEECccccCcc---eEEEccCCCCCc--------cCCeEEEEEEEEC
Q 017257 324 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI 374 (374)
Q Consensus 324 ~D~d~-~~---~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~--------~~~~~L~v~i~f~ 374 (374)
+..+. .+ ++++||.+.||+..|..|. +|.||.+.+|.+ ..+++|-|+++|.
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~ 139 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ 139 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence 75442 22 4789999999999999874 799999999886 4668999999884
No 116
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.48 E-value=2.6e-13 Score=113.65 Aligned_cols=93 Identities=22% Similarity=0.299 Sum_probs=75.4
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|.|+|+.|++++. + +..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.|.|||
T Consensus 3 ~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~d 66 (127)
T cd08394 3 LLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELWN 66 (127)
T ss_pred eEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEEe
Confidence 68999999999842 1 1348999999953 57789988775 999999999999766555 9999999
Q ss_pred eCCCCCCCccEEEEEECccccCc-----ceEEEcc
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH 355 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~ 355 (374)
+|.. .|||+|++.|||+.+..+ -.|++|.
T Consensus 67 kd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 67 KGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred CCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 9965 699999999999998744 2466764
No 117
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.48 E-value=2.2e-13 Score=113.87 Aligned_cols=92 Identities=25% Similarity=0.418 Sum_probs=77.7
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 325 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D 325 (374)
.|+|+|++|++++. .+..+.+||||+|.+.+ ....+|+++.++.||.|||+|.|.+..+. ..|+|+|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 58899999999853 23356789999999854 24678999999999999999999886654 689999999
Q ss_pred eCCCCCCCccEEEEEECccccCc
Q 017257 326 YDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 326 ~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
++..+++++||++.+++.++..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999998765
No 118
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.48 E-value=2.7e-13 Score=113.58 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=75.8
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCC---ccEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI 321 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pe---la~Lrf 321 (374)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999853 23346789999999854 4568888875 789999999999998773 467999
Q ss_pred EEEeeCCCCCCCccEEEEEECccccC
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
.|||.+..+++++||++.+++.++..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988789999999999999854
No 119
>PLN03008 Phospholipase D delta
Probab=99.48 E-value=3.5e-13 Score=141.56 Aligned_cols=99 Identities=22% Similarity=0.445 Sum_probs=86.9
Q ss_pred CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257 270 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 270 s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|+|+|+|.++ +++||++.|||.+|..|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4679999999943 33569999999999999999999998764 58999999999887 699999999999999996
Q ss_pred ---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257 350 ---RAVPLHDRKGERYK-SVKLLMHFEFI 374 (374)
Q Consensus 350 ---R~vpL~d~~g~~~~-~~~L~v~i~f~ 374 (374)
+|++|.+..|++.. ++.|.|.++|+
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 68999999999985 47999999985
No 120
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.46 E-value=5.7e-13 Score=115.89 Aligned_cols=95 Identities=29% Similarity=0.436 Sum_probs=76.8
Q ss_pred CcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC------------------------CceeeeeeeccC
Q 017257 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLED 297 (374)
Q Consensus 242 ~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~------------------------d~~k~kTk~v~~ 297 (374)
|....|+|+|++|++|+. .+..+.+||||+|.+..... ....++|+++.+
T Consensus 25 ~~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~ 98 (153)
T cd08676 25 PPIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQ 98 (153)
T ss_pred CCeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecC
Confidence 345789999999999853 24456789999999853211 112468999999
Q ss_pred CCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257 298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 298 ~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
+.||.|||+|.|.+..+....|.|+|||++ ++|||++.++++.|.
T Consensus 99 tlnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 99 TLNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 999999999999997655678999999987 789999999999987
No 121
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.44 E-value=1.9e-12 Score=106.94 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=83.1
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEEEE
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 324 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~ 324 (374)
|+|+|+.|.+|+. . +.+||||.|.+.+ ...++|+++++ .||.|||+|.|.+...++ ..|.|.||
T Consensus 2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 7899999999863 1 4579999999965 23478999988 999999999999876554 35677788
Q ss_pred eeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEE
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
|.+...++.++|.+.+....+..+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555667776555544443333 478998766655556689888876
No 122
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.44 E-value=1.5e-12 Score=109.56 Aligned_cols=114 Identities=23% Similarity=0.306 Sum_probs=84.3
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|.|+|++|+.+. . +..+.+||||+|.+.+. ...+|++++++.||+|||+|.|.+. +...|.|+||
T Consensus 2 ~~L~V~i~~a~l~~-----~--~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKS-----N--SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCC-----C--CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 36899999998332 1 22456899999998652 3679999999999999999999874 3468999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc-------c-eEEEccCCC-CCccCCeEEEEEE
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRK-GERYKSVKLLMHF 371 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G-------y-R~vpL~d~~-g~~~~~~~L~v~i 371 (374)
|++..+.+++||++.++|+.+..+ + -+++|.... +.-...+.|.+.+
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 999888899999999999998642 1 256665433 1112344666654
No 123
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.43 E-value=1.1e-12 Score=107.87 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=78.4
Q ss_pred CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECcccc-
Q 017257 268 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK- 346 (374)
Q Consensus 268 ~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~- 346 (374)
..+.+||||+|.+.+ ...++|++++++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.++|+.+.
T Consensus 9 ~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~~ 83 (111)
T cd04052 9 KTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLID 83 (111)
T ss_pred cCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHHh
Confidence 456789999999964 2457899988899999999999998766557799999999987 7999999999999873
Q ss_pred C---cceEEEccCCCCCccCCeEEEEEEEE
Q 017257 347 Q---GIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 347 ~---GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
. +.+|.+|.+ .+.+.|.++++|
T Consensus 84 ~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 84 ATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357888865 235688888877
No 124
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.43 E-value=5e-13 Score=102.97 Aligned_cols=85 Identities=38% Similarity=0.550 Sum_probs=73.4
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|++|++|+.. +..+.+||||+|.+.+... ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||+
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999642 2344679999999987554 568999999999999999999999888888899999999
Q ss_pred CCCCCCCccEEEE
Q 017257 327 DMSEKDDFGGQTC 339 (374)
Q Consensus 327 d~~~~dd~iG~~~ 339 (374)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999975
No 125
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.39 E-value=2.6e-12 Score=105.27 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=71.7
Q ss_pred EEEeccccccCCCCCcccCCCCCCceEEEEEecCC-CCceeeeeeeccCCCCCccCcEEEEEee---cCC-ccEEEEEEE
Q 017257 250 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH 324 (374)
Q Consensus 250 ~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~-~d~~k~kTk~v~~~~nP~Wne~f~F~v~---~pe-la~Lrf~V~ 324 (374)
-.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|| +|.|.+. ..+ ...|+|+||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 3568888853 2445678999999987532 12346899999999999999 6777643 222 468999999
Q ss_pred eeCCCCCCCccEEEEEECccccCc
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
|++..+++++||++.++++.|..+
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcC
Confidence 999888899999999999999854
No 126
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=5.7e-13 Score=129.25 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=83.2
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 323 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V 323 (374)
..|+|+|..|.+|-. .|.++-+||||++.+...+....++||++++.++||+|||+|.|.+...+. ..|.++|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 357888888888742 355677899999999988888889999999999999999999999865443 5789999
Q ss_pred EeeCCCCCCCccEEEEEECcccc
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
||+|..+++||.|...+-+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999999885
No 127
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.32 E-value=1.3e-11 Score=124.07 Aligned_cols=121 Identities=23% Similarity=0.301 Sum_probs=92.7
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 322 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~ 322 (374)
..|.|+|+.|.+|+.. +..+..||||++++.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|+
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 5689999999999742 2234689999999974 44678899999999999999999999766554 579999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEE
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEF 373 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f 373 (374)
|||+|.++++++||++.+||..+.... .|.+|....-..-. .+-|++.+.|
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887655 36666543111111 1356665544
No 128
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.31 E-value=2e-11 Score=96.12 Aligned_cols=99 Identities=38% Similarity=0.556 Sum_probs=81.2
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.||++|.|.+..+....|.|+|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 68999999998531 122457999999997532 3468899999889999999999998776567899999999
Q ss_pred CCCCCCCccEEEEEECccccCcceEEE
Q 017257 327 DMSEKDDFGGQTCLPVSELKQGIRAVP 353 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~GyR~vp 353 (374)
+..+.+.++|++.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876678999999999999999887643
No 129
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.22 E-value=6.8e-11 Score=100.19 Aligned_cols=97 Identities=24% Similarity=0.257 Sum_probs=78.5
Q ss_pred EEEEEEeccccccCCCCCcccCCC--CCCceEEEEEecCCCCceeeeeeeccCCCC--CccCcEEEEEeec---------
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV--------- 313 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s--~~DpyV~V~i~g~~~d~~k~kTk~v~~~~n--P~Wne~f~F~v~~--------- 313 (374)
|+|.|..+++++... .+..+ ..||||++.+.+. ...+++|.++.++.| |.||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 789999999865421 11122 4899999999875 346789999999887 9999999998765
Q ss_pred ------------CCc--cEEEEEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257 314 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 349 (374)
Q Consensus 314 ------------pel--a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy 349 (374)
.++ ..|.++|||+|..++|++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 122 578999999999999999999999999998775
No 130
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.17 E-value=9.7e-11 Score=133.59 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=91.7
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 322 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~ 322 (374)
.+.|+|+|+.|+++. +.++..||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|+
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 467999999999984 2245689999999873 236799999999999999999999988764 459999
Q ss_pred EEeeCCCCCCCccEEEEEECccccCcce---EEEccC---CCCCccCCeEEEEEEEE
Q 017257 323 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF 373 (374)
Q Consensus 323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d---~~g~~~~~~~L~v~i~f 373 (374)
|||+|.++ ++.+|.+.|++.++-.+-+ +.+|.+ +.|.+ -+|-|+|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999886 5699999999999876544 578875 34442 368888887
No 131
>PLN02270 phospholipase D alpha
Probab=99.13 E-value=4.6e-10 Score=118.27 Aligned_cols=124 Identities=19% Similarity=0.279 Sum_probs=99.7
Q ss_pred eEEEEEEEeccccccC-C-----------CCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEe
Q 017257 245 KTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPL 311 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~-~-----------~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v 311 (374)
.+|.|+|+.|.+|+.. . ..+-......+||||.|.+.+ ..-.||+++.|. .||+|||+|...+
T Consensus 8 g~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~~ 83 (808)
T PLN02270 8 GTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIYC 83 (808)
T ss_pred cceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEee
Confidence 5789999999988631 0 000000123569999999986 345799999886 6999999999998
Q ss_pred ecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257 312 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 374 (374)
Q Consensus 312 ~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f~ 374 (374)
..+. +-|.|+|+|.|.++ ..+||.+.||+..|-.|- +|+|+++.+|+++. ++.|-|.++|+
T Consensus 84 ah~~-~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 84 AHMA-SNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred ccCc-ceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 7764 77999999999887 679999999999999884 78999999999984 58999999985
No 132
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.12 E-value=4.9e-10 Score=112.70 Aligned_cols=175 Identities=20% Similarity=0.245 Sum_probs=119.0
Q ss_pred cceeeee--cCC-----cccCCCCCCccccccccceee-eec-cccCCcceeee-eeecccccceeeeecCCCcccCCCC
Q 017257 162 RNLLRIY--PKG-----IRVDSSNYNPLIGWSHGAQMV-AFN-MQGHGRSLWLM-HGMFRANGGCGYVKKPNFLLQTGPH 231 (374)
Q Consensus 162 ~~l~RvY--P~g-----~R~~SSN~~P~~~W~~G~Qmv-AlN-~Qt~d~~m~ln-~~~F~~ng~~GYVLKP~~lr~~~~~ 231 (374)
.--+++| |.- ||+.--..||. |+..-.+- +.+ .|+.-+.+.+. ..+|..|+--|.|.=|-...+....
T Consensus 189 dpyVK~~llPdk~~k~kT~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~ 266 (421)
T KOG1028|consen 189 DPYVKVYLLPDKKGKFKTRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLST 266 (421)
T ss_pred CCeeEEEEcCCCCCcceeeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCcccccccc
Confidence 4456666 433 56667777776 45554443 333 44555555554 3789999999999888222221110
Q ss_pred Cc----ccCC------CC--------CCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeee
Q 017257 232 NE----VFDP------KV--------KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTK 293 (374)
Q Consensus 232 ~~----~f~p------~~--------~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk 293 (374)
.. ...+ .. -+|....|+|.|+.|++|+. .+..+..||||++.+........++||.
T Consensus 267 ~~~w~~l~~~~~~~~~~~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~ 340 (421)
T KOG1028|consen 267 TLFWKDLQPSSTDSEELAGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTS 340 (421)
T ss_pred ceeeeccccccCCcccccceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeee
Confidence 00 0000 00 12345679999999999963 3445678999999998544445577899
Q ss_pred eccCCCCCccCcEEEEEeecCCc--cEEEEEEEeeCCCCCCCccEEEEEECcc
Q 017257 294 TLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSE 344 (374)
Q Consensus 294 ~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~D~d~~~~dd~iG~~~ipl~~ 344 (374)
+.+++.||+|||+|.|.|....+ +.|.++|||+|..+++++||++++....
T Consensus 341 ~~~~~~npv~nesf~F~vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 341 VKKKTLNPVFNETFVFDVPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred cccCCCCCcccccEEEeCCHHHhheeEEEEEEEEcccccccceeeEEEecCCC
Confidence 99999999999999998865444 5699999999999999999988887766
No 133
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.09 E-value=1.9e-10 Score=116.05 Aligned_cols=115 Identities=25% Similarity=0.396 Sum_probs=84.3
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..++++|++||+|.. .|..+..||||.+++. +.++||+++..++||+|||.|.|.+.+.. ..|.+.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechnst-drikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNST-DRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCCC-ceeEEEEe
Confidence 458899999999853 3445678999999986 46889999999999999999999997653 56899999
Q ss_pred eeCCC-----------CCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEE
Q 017257 325 EYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 371 (374)
Q Consensus 325 D~d~~-----------~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i 371 (374)
|.|.. ..|||+||+.|-+..|...- -|..|--+..+...++.+-+||
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhi 421 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 421 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEE
Confidence 98753 35899999999998875321 2334433333333333344444
No 134
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=99.08 E-value=1e-09 Score=85.73 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=74.1
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|.|.|++|+++... ......+|||.+.+.+ ....+|.++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46899999988542 1234689999999975 3567899998889999999999998764456799999998
Q ss_pred CCCCCCCccEEEEEECcccc
Q 017257 327 DMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~ 346 (374)
+....+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87766899999999999987
No 135
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.88 E-value=6.7e-09 Score=111.59 Aligned_cols=103 Identities=26% Similarity=0.405 Sum_probs=87.7
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|+|.+++|++|+. .+..+-.||||++.+.+ +.-+||++++.|+||+|||+|..+|.+-....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 458899999999863 35566689999999976 34689999999999999999999998877788999999
Q ss_pred eeCCCCCCCccEEEEEECccccCcce---EEEccCC
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDR 357 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~ 357 (374)
|+|...+++.||++.++|..|.+|.- .|||-.+
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk 1145 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGK 1145 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCc
Confidence 99999999999999999999998853 4676433
No 136
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.68 E-value=7e-09 Score=106.24 Aligned_cols=96 Identities=24% Similarity=0.373 Sum_probs=76.9
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--CceeeeeeeccCCCCCccCcEEEEEeec----CCccE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL 318 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--d~~k~kTk~v~~~~nP~Wne~f~F~v~~----pela~ 318 (374)
.+|.|.|+.|.++-. .|.++-+||||.|++..-.. -...+||++++.++||+|+|+|+|.|.. .+-|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 457788888887632 35567889999999864111 1335799999999999999999999863 24689
Q ss_pred EEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257 319 LRIEVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
|.|+|.|+|..+.+||.|++.+-|..+.
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~vp 1048 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDVP 1048 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCCC
Confidence 9999999999888999999999888763
No 137
>PLN02352 phospholipase D epsilon
Probab=98.67 E-value=1.6e-07 Score=99.04 Aligned_cols=118 Identities=19% Similarity=0.266 Sum_probs=89.4
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
..+|.++|+.|..+...... ........||||.|.+.+. .-.|| .+.-||+|||+|...+..+..+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 36789999999733211110 0001122399999999762 34567 4446999999999998876546799999
Q ss_pred EeeCCCCCCCccEEEEEECccccCcc----eEEEccCCCCCccCCeEEEEEEEEC
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy----R~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
+| ...+||.+.||+..|-.|- +|+|+++.+|+++.+++|-|+++|+
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 98 2579999999999999883 5899999999999889999999985
No 138
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=98.33 E-value=9.6e-07 Score=71.23 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=64.2
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~ 326 (374)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|+|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889999887431 1011345689999999875 457788874 69999999999994 345789999997
Q ss_pred CCCCCCCccEEEEEECccccCc
Q 017257 327 DMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~G 348 (374)
.. ...-.||..-++++.|..-
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~Ee 89 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIAEE 89 (109)
T ss_pred CC-CeecceeeehhhHHHHHHH
Confidence 53 2345788888888776543
No 139
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.33 E-value=2.7e-06 Score=91.99 Aligned_cols=94 Identities=23% Similarity=0.328 Sum_probs=74.0
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
+.|.|+|.+|.++.. ...-..+.+|||+.+..++ ....||++++|++||+|||+|-..+..-+ .-|.++||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~~-d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSFT-DPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEecccC-CceeEEEE
Confidence 468899999998843 2112456789999999765 33459999999999999999988775221 35899999
Q ss_pred eeCCCCCCCccEEEEEECccccC
Q 017257 325 EYDMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~~ 347 (374)
|.+....|..+|.+.++|..|.+
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~~ 529 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLHQ 529 (1227)
T ss_pred eccccCCcceeeeEEechHHhhh
Confidence 98777789999999999998863
No 140
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=98.17 E-value=6.8e-06 Score=84.75 Aligned_cols=105 Identities=24% Similarity=0.345 Sum_probs=81.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~ 324 (374)
..|.|+|..|++|+. .+..+..|||+.|.+.. +...||.+|..++.|.|.|+|.|.|. +....|.|-||
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP-~~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIP-RTFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecC-cceeeEEEEEe
Confidence 458999999999974 23445689999999864 45679999999999999999999874 34567999999
Q ss_pred eeCCCCCCCccEEEEEECcccc--Ccc-eEEEc--cCCCCCc
Q 017257 325 EYDMSEKDDFGGQTCLPVSELK--QGI-RAVPL--HDRKGER 361 (374)
Q Consensus 325 D~d~~~~dd~iG~~~ipl~~L~--~Gy-R~vpL--~d~~g~~ 361 (374)
|.| .++|+.||.++|.-..|. +|. .|..| .|.+.+.
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEV 114 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEV 114 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhh
Confidence 999 788999999999877664 343 23444 3555554
No 141
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=98.16 E-value=5.7e-07 Score=93.45 Aligned_cols=39 Identities=31% Similarity=0.600 Sum_probs=35.5
Q ss_pred hHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCch
Q 017257 2 VTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKE 40 (374)
Q Consensus 2 l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~ 40 (374)
++++|||+|++.|. -..++||||.|||+|||||.||++.
T Consensus 418 ~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~ 457 (1267)
T KOG1264|consen 418 FKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPP 457 (1267)
T ss_pred HHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCc
Confidence 68999999999884 5589999999999999999999975
No 142
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.11 E-value=1e-05 Score=82.65 Aligned_cols=103 Identities=28% Similarity=0.399 Sum_probs=82.2
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC-C-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-D-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 319 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~-d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~L 319 (374)
..++|+|+.|.+|.+. ..+...|||+|.|.|... | +.++.|++..||+.|.+||+|.|.+.. |+.--|
T Consensus 1125 hkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 4678999999988642 234567899999998543 2 345678888899999999999998863 666679
Q ss_pred EEEEEeeCCCCCCCccEEEEEECcccc-Ccc--eEEEc
Q 017257 320 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPL 354 (374)
Q Consensus 320 rf~V~D~d~~~~dd~iG~~~ipl~~L~-~Gy--R~vpL 354 (374)
.|.|+|+.....|..+|.+.++|.++. .|- .|+||
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 999999998777889999999999985 353 57888
No 143
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=98.04 E-value=1.7e-05 Score=80.19 Aligned_cols=120 Identities=18% Similarity=0.263 Sum_probs=89.8
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccC-cEEEEEeecCCc--cEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN-EEFEFPLSVPEL--ALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wn-e~f~F~v~~pel--a~Lrf 321 (374)
..|.|+|..|++||...+. ....|.||+|.+.. ..+||.+....+||.|| +=|.|.|...++ .-|.+
T Consensus 3 gkl~vki~a~r~lpvmdka-----sd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDKA-----SDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCcccccc-----cccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 4588999999999863211 23468899999864 56899999999999998 559999987666 46899
Q ss_pred EEEeeCCCCCCCccEEEEEECcccc----------Ccc---eEEEccCCCCCccCCeEEEEEEEEC
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELK----------QGI---RAVPLHDRKGERYKSVKLLMHFEFI 374 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~----------~Gy---R~vpL~d~~g~~~~~~~L~v~i~f~ 374 (374)
++.|+|..+.+|-||.+.|.++-|. .|- -|+|++|.-...-....+.|+++.|
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999999999999999999988663 121 4788887533322334567777654
No 144
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.99 E-value=3.1e-05 Score=79.99 Aligned_cols=76 Identities=26% Similarity=0.418 Sum_probs=63.3
Q ss_pred CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC---------------CccEEEEEEEe-eCCCCCCC
Q 017257 270 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 333 (374)
Q Consensus 270 s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 333 (374)
+..|||++|...|.-.... .+|++.+.+.||.|||.|.|.+..+ ++.-|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~~-~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLKE-KKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhhc-cccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 4589999999987443333 7899999999999999999998766 56678999998 46666699
Q ss_pred ccEEEEEECcccc
Q 017257 334 FGGQTCLPVSELK 346 (374)
Q Consensus 334 ~iG~~~ipl~~L~ 346 (374)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999987
No 145
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.96 E-value=6.2e-06 Score=88.89 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=77.9
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ecCC--ccEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPE--LALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~pe--la~Lrf 321 (374)
.+|+|-|..+++|+.- ..+..+||||+.++...|....|+||++++.+.||.|||.+.+.. .... ...|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4677888888888531 224568999999999888888899999999999999999998872 2221 246899
Q ss_pred EEEeeCCCCCCCccEEEEEECcccc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
+||..+....+.|+|.++|||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988878999999999998764
No 146
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.74 E-value=4.1e-05 Score=72.98 Aligned_cols=104 Identities=24% Similarity=0.312 Sum_probs=75.4
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc--EEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 323 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela--~Lrf~V 323 (374)
.|.|+++.+..+. ..|..+-.||||++.+...-....++||.+.+++.||+||+.|.|.+..-+|+ -+.+.|
T Consensus 234 ~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 4677887766552 35667788999999887333334567899999999999999999999877776 477899
Q ss_pred EeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCc
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 361 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~ 361 (374)
||++.....+++|-... -+||--++++..|..
T Consensus 308 gd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence 99998767888885332 235554555555443
No 147
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=97.64 E-value=0.00098 Score=58.31 Aligned_cols=102 Identities=17% Similarity=0.179 Sum_probs=68.7
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCc-eeeeeeeccCCCCCccCcEEEEEeecCC---ccEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 320 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~-~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lr 320 (374)
..++|+|+++.++... ...|.||++++......- ....|+.+.- -++.|||-++|+|...+ .|.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 4588999999987531 124779999876421111 1123443332 47899999999987544 48999
Q ss_pred EEEEeeCCCC----CCCccEEEEEECc----cccCcceEEEccC
Q 017257 321 IEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLHD 356 (374)
Q Consensus 321 f~V~D~d~~~----~dd~iG~~~ipl~----~L~~GyR~vpL~d 356 (374)
|+||+..... ....+|++.++|- .|++|...+.|..
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW~ 121 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWP 121 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEEc
Confidence 9999976421 1246999999985 5788987776653
No 148
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=97.63 E-value=0.00084 Score=59.67 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=70.1
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 320 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr 320 (374)
..++|+|+++.++.. .....+.||++++...... +....|+.+.-+-.+.|||.+.|+|.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 458999999998753 0123466888887631111 122345444434569999999998865 4458999
Q ss_pred EEEEeeCCCC----------------CCCccEEEEEECc----cccCcceEEEcc
Q 017257 321 IEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH 355 (374)
Q Consensus 321 f~V~D~d~~~----------------~dd~iG~~~ipl~----~L~~GyR~vpL~ 355 (374)
|+||+..... ....||++.++|- .|++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999975322 1368999999985 578898777775
No 149
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=97.57 E-value=0.0011 Score=57.71 Aligned_cols=104 Identities=19% Similarity=0.196 Sum_probs=69.4
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCc-eeeeeeeccCCCCCccCcEEEEEeec---CCccEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLRI 321 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~-~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lrf 321 (374)
.++|+|.+..+... ......+.||++++.-..... ....|+.+....++.|||.++|++.. |-.|.|.|
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 46788877776532 011235678888876322111 12233333333578999999999764 44489999
Q ss_pred EEEeeCCCC--CCCccEEEEEECc----cccCcceEEEccC
Q 017257 322 EVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLHD 356 (374)
Q Consensus 322 ~V~D~d~~~--~dd~iG~~~ipl~----~L~~GyR~vpL~d 356 (374)
+||+.+..+ ....||++.++|- .|++|...+.|..
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW~ 122 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLWP 122 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEeccC
Confidence 999976543 3579999999985 5789999888863
No 150
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=97.45 E-value=0.0012 Score=58.56 Aligned_cols=113 Identities=24% Similarity=0.220 Sum_probs=74.7
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeec--cCCC--CCccCcEEEEEeec---CC
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTL--EDNW--IPSWNEEFEFPLSV---PE 315 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v--~~~~--nP~Wne~f~F~v~~---pe 315 (374)
...+.|+|.++.+++.... ....|.||++++.-.... +....|+.. .+.+ .+.|||.++|++.. |-
T Consensus 7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 3458899999998864211 113577999988632111 112244432 2332 57899999999864 44
Q ss_pred ccEEEEEEEeeCCCC---------CCCccEEEEEECc----cccCcceEEEccC-CCCCcc
Q 017257 316 LALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERY 362 (374)
Q Consensus 316 la~Lrf~V~D~d~~~---------~dd~iG~~~ipl~----~L~~GyR~vpL~d-~~g~~~ 362 (374)
.|.|.|+||+....+ ....||++.++|- .|++|...+.|.- ....++
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~ 141 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPL 141 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcC
Confidence 489999999976443 3469999999985 5789999888863 333444
No 151
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.44 E-value=4.6e-05 Score=78.94 Aligned_cols=67 Identities=25% Similarity=0.508 Sum_probs=52.4
Q ss_pred eeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCC------------------------------------CCC
Q 017257 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE------------------------------------KDD 333 (374)
Q Consensus 290 ~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~------------------------------------~dd 333 (374)
+-|.+.+.++||.|+|.|.|+|..-.-..+.+.+||+|.-. .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 34777778899999999999997655567899999987531 389
Q ss_pred ccEEEEEECccccC-cc-eEEEccC
Q 017257 334 FGGQTCLPVSELKQ-GI-RAVPLHD 356 (374)
Q Consensus 334 ~iG~~~ipl~~L~~-Gy-R~vpL~d 356 (374)
|+|...|||.++.+ |. +|..|--
T Consensus 259 FLGciNipl~EiP~~Gld~WFkLep 283 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPPDGLDQWFKLEP 283 (1103)
T ss_pred cccccccchhcCCcchHHHHhccCc
Confidence 99999999999975 43 5555543
No 152
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=97.41 E-value=0.00045 Score=57.74 Aligned_cols=73 Identities=23% Similarity=0.443 Sum_probs=55.0
Q ss_pred CCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec---------------CCccEEEEEEEeeCCCC------
Q 017257 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------ 330 (374)
Q Consensus 272 ~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---------------pela~Lrf~V~D~d~~~------ 330 (374)
.++||++.+.-.+.+ ..++|+++.++|-|.|+..++|.+.. -+.+-+.|+||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998766654 45789999999999999999998641 12256889999876432
Q ss_pred ----CCCccEEEEEECccc
Q 017257 331 ----KDDFGGQTCLPVSEL 345 (374)
Q Consensus 331 ----~dd~iG~~~ipl~~L 345 (374)
+|-.+|.+.||+..|
T Consensus 112 ~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 112 IETSGDILLGTVKIPLRDL 130 (143)
T ss_pred cCcCCcEEEEEEEeeHHHH
Confidence 344778888888776
No 153
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=97.32 E-value=0.00016 Score=77.36 Aligned_cols=94 Identities=19% Similarity=0.255 Sum_probs=75.0
Q ss_pred CcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEE
Q 017257 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 321 (374)
Q Consensus 242 ~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf 321 (374)
|+....+|-|..|.+|.. .|..+..||||.+.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 445566788888888742 355667899999998752 12245677889999999999999988887788999
Q ss_pred EEEeeCCCCCCCccEEEEEECcc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSE 344 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~ 344 (374)
.|+|+|..+.|+.||++.+.+..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999999999999988763
No 154
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=97.29 E-value=0.0012 Score=57.96 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=59.9
Q ss_pred CCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc---cEEEEEEEeeCCCCCCCccEEEEEECc---
Q 017257 271 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVS--- 343 (374)
Q Consensus 271 ~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel---a~Lrf~V~D~d~~~~dd~iG~~~ipl~--- 343 (374)
..|.||++++...... +....|..+.-+..+.|||-+.|+|...+| |.|+|+||+.+..++...+|+++++|-
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 3577898887632111 111234433333467899999999876554 899999999876555679999999985
Q ss_pred -cccCcceEEEcc
Q 017257 344 -ELKQGIRAVPLH 355 (374)
Q Consensus 344 -~L~~GyR~vpL~ 355 (374)
.|++|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 578898888875
No 155
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.18 E-value=8e-05 Score=71.03 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=73.6
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEE
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 321 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf 321 (374)
..+..++..|.+|.. .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+ .-.+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457788888887632 34567789999988764333344578999999999999987666543322 346899
Q ss_pred EEEeeCCCCCCCccEEEEEECccccCc
Q 017257 322 EVHEYDMSEKDDFGGQTCLPVSELKQG 348 (374)
Q Consensus 322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G 348 (374)
.|+|.+....++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999888887643
No 156
>PLN02964 phosphatidylserine decarboxylase
Probab=97.16 E-value=0.001 Score=70.07 Aligned_cols=86 Identities=22% Similarity=0.156 Sum_probs=69.6
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
.....|++++|.-- -.|+|..+-..| .+.+||.+.+++.||+||+.-.|.+...+.-+.+|.|
T Consensus 53 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 115 (644)
T PLN02964 53 SGIALLTLVGAEMK-------------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARISV 115 (644)
T ss_pred cCeEEEEeehhhhc-------------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEEE
Confidence 35678888888621 137776555555 4679999999999999999999999877788889999
Q ss_pred EeeCCCCCCCccEEEEEECcccc
Q 017257 324 HEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 324 ~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
||.+..+.++++|-+.+.+..+-
T Consensus 116 ~~~~~~s~n~lv~~~e~~~t~f~ 138 (644)
T PLN02964 116 FETNRLSKNTLVGYCELDLFDFV 138 (644)
T ss_pred EecCCCCHHHhhhheeecHhhcc
Confidence 99999999999999988776653
No 157
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=96.99 E-value=0.0062 Score=54.27 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=64.1
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 322 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~ 322 (374)
.++|+|.++..... +.......||++.+.....-....+|.....+-++.|||-+.|+|...+ .|.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 47888888763211 1111234588887653111112234554444557999999999987544 4899999
Q ss_pred EEeeCCCC----------------CCCccEEEEEECc----cccCcceEEEc
Q 017257 323 VHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPL 354 (374)
Q Consensus 323 V~D~d~~~----------------~dd~iG~~~ipl~----~L~~GyR~vpL 354 (374)
||+..... .+-.||++.+.|- .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 99963211 2457899999885 57889776655
No 158
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=96.88 E-value=0.0017 Score=50.66 Aligned_cols=90 Identities=18% Similarity=0.254 Sum_probs=59.8
Q ss_pred EEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEEEEee
Q 017257 249 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEY 326 (374)
Q Consensus 249 V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~D~ 326 (374)
|+|+.+.++..+. ..+..+..||+=-+. .+. ....||.+.+...||+|.|+|.|.+...++ ..|.|.|+.
T Consensus 3 itv~~c~d~s~~~-----~~~e~~~i~ikg~~t-l~k-pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~- 74 (103)
T cd08684 3 ITVLKCKDLSWPS-----SCGENPTIYIKGILT-LPK-PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT- 74 (103)
T ss_pred EEEEEeccccccc-----ccCcCCeeEEEEEEe-cCC-CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence 5677777765431 112223345542222 222 345788888888999999999999876555 356778877
Q ss_pred CCCCCCCccEEEEEECccccC
Q 017257 327 DMSEKDDFGGQTCLPVSELKQ 347 (374)
Q Consensus 327 d~~~~dd~iG~~~ipl~~L~~ 347 (374)
...+.+.||++.+.++++-+
T Consensus 75 -~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 75 -QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred -cCCccceeeEEEeecccCCH
Confidence 34568899999999988753
No 159
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=96.73 E-value=0.0055 Score=52.48 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=54.3
Q ss_pred ceEEEEEecCCCC-c-eeeeeeeccCC-CCCccCcEEEEEeec---CCccEEEEEEEeeCCCCCC----CccEEEEEECc
Q 017257 274 FYARVGIAGVPAD-T-VMKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS 343 (374)
Q Consensus 274 pyV~V~i~g~~~d-~-~k~kTk~v~~~-~nP~Wne~f~F~v~~---pela~Lrf~V~D~d~~~~d----d~iG~~~ipl~ 343 (374)
.||+++|.-.... + ....|+.+.-+ .++.|||.++|+|.. |-.|.|.|+|+..+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 3666666521111 1 12255555444 689999999999864 5558999999998755444 68999999985
Q ss_pred ----cccCcceEEEcc
Q 017257 344 ----ELKQGIRAVPLH 355 (374)
Q Consensus 344 ----~L~~GyR~vpL~ 355 (374)
.|++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 477888888775
No 160
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=96.43 E-value=0.0018 Score=62.80 Aligned_cols=37 Identities=24% Similarity=0.606 Sum_probs=31.8
Q ss_pred ChHHHhhc-cccCCCC-----CCC------CCCCChhhhccceEEecCC
Q 017257 1 MVTQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP 37 (374)
Q Consensus 1 ~l~~~~Gd-~L~~~~~-----~~~------~~lpSPe~Lk~kiliK~K~ 37 (374)
+++++||+ +||+|+. ..+ ..||||++|||||||.-+.
T Consensus 161 ~i~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 161 LIRSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHHHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 47899999 9999974 222 7999999999999999986
No 161
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=95.76 E-value=0.013 Score=57.66 Aligned_cols=120 Identities=17% Similarity=0.187 Sum_probs=85.0
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-CCc--------
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PEL-------- 316 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-pel-------- 316 (374)
.|.+.|.+|+.++.+.... -.|-||+++..-......+.||.+++++-.|.|+|.|...|.. +.+
T Consensus 368 elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~f 441 (523)
T KOG3837|consen 368 ELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRRF 441 (523)
T ss_pred HhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHHH
Confidence 3567777888776542111 1366999987744333456789999999999999999988753 211
Q ss_pred --cEEEEEEEeeCCC-CCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257 317 --ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 317 --a~Lrf~V~D~d~~-~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
--+.|+|+....+ .+|.++|.+.+.+.-|..-. .+++|+|. ..--|+.|-|++.+
T Consensus 442 kr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~DG--RK~vGGkLevKvRi 502 (523)
T KOG3837|consen 442 KRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKDG--RKAVGGKLEVKVRI 502 (523)
T ss_pred HhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceecccc--ccccCCeeEEEEEE
Confidence 1378999987654 45789999999988886543 46799875 43457788888864
No 162
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=94.59 E-value=0.085 Score=54.13 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=65.0
Q ss_pred eeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCC----CCCCccEEEEEECcccc-CcceEEEccCCCCCccCC
Q 017257 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYKS 364 (374)
Q Consensus 290 ~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~----~~dd~iG~~~ipl~~L~-~GyR~vpL~d~~g~~~~~ 364 (374)
.+|.++.+..||.|-++|......+....|+|.|+|-+.. ...+|+|++..-++.+- ...+.++|.-+.+..-..
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4899999999999999998888888888999999997643 34789999988888764 345666776666666566
Q ss_pred eEEEEEEE
Q 017257 365 VKLLMHFE 372 (374)
Q Consensus 365 ~~L~v~i~ 372 (374)
+++.|+++
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 67777764
No 163
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.50 E-value=0.02 Score=55.92 Aligned_cols=106 Identities=24% Similarity=0.256 Sum_probs=77.1
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
+..|.|.||.|.+|-.. . ...+.++|||+|++.+...-..+.||+...++..|.+-+...|.-. |.-..|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k---~--~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~s-p~~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK---P--GSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQS-PPGKYLQGTV 341 (405)
T ss_pred cCceeEEEEeccccccc---C--CcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccC-CCccEEEEEE
Confidence 35789999999998642 1 1123679999999987666567889999999999988888888654 3356788999
Q ss_pred Ee-eCCCCCCCccEEEEEECcccc----CcceEEEcc
Q 017257 324 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLH 355 (374)
Q Consensus 324 ~D-~d~~~~dd~iG~~~ipl~~L~----~GyR~vpL~ 355 (374)
|- +.....+.|+|.+.+-+.+|. .+.-|.+|+
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlf 378 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLF 378 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeecc
Confidence 85 344455679998888887774 334455554
No 164
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=92.93 E-value=0.076 Score=57.66 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=59.8
Q ss_pred CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eec--------CCccEEEEEEEeeCCCCCCCccEEE
Q 017257 268 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQT 338 (374)
Q Consensus 268 ~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~--------pela~Lrf~V~D~d~~~~dd~iG~~ 338 (374)
..+..|||+.|...+ +.+.|.++.+++||.|+++..|. +.- ...-.+.|+|+|.|..+.++|.|..
T Consensus 223 k~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr~ 297 (1105)
T KOG1326|consen 223 KDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGRK 297 (1105)
T ss_pred cccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhccc
Confidence 345679999998876 45789999999999999998885 221 1124688999999999999999975
Q ss_pred EEECccc-c-CcceEEEcc
Q 017257 339 CLPVSEL-K-QGIRAVPLH 355 (374)
Q Consensus 339 ~ipl~~L-~-~GyR~vpL~ 355 (374)
.....-+ . +--.++|+.
T Consensus 298 ~~~p~V~~~~p~lkw~p~~ 316 (1105)
T KOG1326|consen 298 KQRPYVMVQCPALKWVPTM 316 (1105)
T ss_pred ccceEEEecCCccceEEee
Confidence 4433322 2 234566664
No 165
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=92.43 E-value=0.75 Score=36.84 Aligned_cols=56 Identities=21% Similarity=0.220 Sum_probs=36.2
Q ss_pred CCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEEEEeeC
Q 017257 272 PDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYD 327 (374)
Q Consensus 272 ~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~V~D~d 327 (374)
.+.||++++...... +....|+.+.-...+.|||-+.|++...+ .|.|.|+||+..
T Consensus 32 ~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~ 91 (100)
T smart00142 32 SDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK 91 (100)
T ss_pred ceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence 467999987632111 11223443332335899999999987544 489999999864
No 166
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=92.38 E-value=0.8 Score=41.21 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=37.6
Q ss_pred ceeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCCCC--CccEEEEEEC
Q 017257 287 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD--DFGGQTCLPV 342 (374)
Q Consensus 287 ~~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~~d--d~iG~~~ipl 342 (374)
...++|-+...+-+|.|+|++.+.|... +-+-|+|+++......+. ..+|-+.+||
T Consensus 52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL 111 (189)
T cd08695 52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL 111 (189)
T ss_pred cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence 3467888888888999999998887543 347799988774422111 3455555555
No 167
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=91.36 E-value=2.2 Score=38.57 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=48.6
Q ss_pred eeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCC-C---CCccEEEEEECc-----cccCcceEEEcc
Q 017257 288 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH 355 (374)
Q Consensus 288 ~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~iG~~~ipl~-----~L~~GyR~vpL~ 355 (374)
..++|-+...+-+|.|+|++...|... .-+-|+|+++...... + ...+|-+.+||- -|+.|-..++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 457888877778999999998887543 3478999997643211 1 246788888884 377887777775
No 168
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=90.75 E-value=7.7 Score=32.59 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=68.5
Q ss_pred eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeec---C-----C
Q 017257 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P-----E 315 (374)
Q Consensus 245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~---p-----e 315 (374)
-.+.|+|....+++. .+..|.|.............|.... .+..-.||++|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 457778877777642 1223444444321111134454433 34567899999998752 1 1
Q ss_pred ccEEEEEEEeeCCCCCCCccEEEEEECccccCc-----ceEEEccCCCCCccCCeEEEEEEEE
Q 017257 316 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 316 la~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
--.+.|.|+.....++...+|.+.|.|+....- .+.++|... +-..|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 236889998875333336899999999987652 234566554 4456788887765
No 169
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=90.43 E-value=1.1 Score=40.01 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=35.5
Q ss_pred eeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCCC-C--CccEEEEEECcc----ccCcceEEEcc
Q 017257 289 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK-D--DFGGQTCLPVSE----LKQGIRAVPLH 355 (374)
Q Consensus 289 k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~~-d--d~iG~~~ipl~~----L~~GyR~vpL~ 355 (374)
.+.|.+...+-+|.|+|+|.+++..+ +-.-|.|++++.....+ + ..+|.+.+||-. +..|...++++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999999887643 34689999998653221 1 467777777654 33444555664
No 170
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=90.03 E-value=0.48 Score=48.81 Aligned_cols=82 Identities=22% Similarity=0.334 Sum_probs=58.1
Q ss_pred ccCCCCCCceEEEEEe-cCCCCceeeeeeeccCCCCCccCcE-EEE-EeecCC-ccEEEEEEEeeCCCCCCCccEEEEEE
Q 017257 266 FDAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEE-FEF-PLSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 341 (374)
Q Consensus 266 ~~~~s~~DpyV~V~i~-g~~~d~~k~kTk~v~~~~nP~Wne~-f~F-~v~~pe-la~Lrf~V~D~d~~~~dd~iG~~~ip 341 (374)
.+.++..|||..+.=. +.......++|.+++++.||.|-.. ... .+...+ -..+.+.++|++..+++++||++..+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 3557788999876644 2222334579999999999999642 111 111112 25678999999988888999999999
Q ss_pred CccccC
Q 017257 342 VSELKQ 347 (374)
Q Consensus 342 l~~L~~ 347 (374)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 999974
No 171
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=89.83 E-value=1.2 Score=39.64 Aligned_cols=65 Identities=18% Similarity=0.264 Sum_probs=45.6
Q ss_pred eeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCC-----CCCCccEEEEEECcc-----ccCcceEEEccC
Q 017257 292 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMS-----EKDDFGGQTCLPVSE-----LKQGIRAVPLHD 356 (374)
Q Consensus 292 Tk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~-----~~dd~iG~~~ipl~~-----L~~GyR~vpL~d 356 (374)
|.++..+-+|.|+|+|...+... +..-|.|++++.+.. .....+|.+.+||-. ++.|...+|++-
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k 132 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYK 132 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEe
Confidence 44444447899999998887432 346799999886532 224578888888877 677877777753
No 172
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=89.16 E-value=8.5 Score=33.55 Aligned_cols=124 Identities=19% Similarity=0.152 Sum_probs=80.3
Q ss_pred cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC-------
Q 017257 243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------- 315 (374)
Q Consensus 243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe------- 315 (374)
.+..|.++|+.|+-.-.- . .+.-+..+..+.+.++= ..++++|+.+.-+.+|.|+|.|-|++....
T Consensus 7 ~~~yL~l~vlgGkAFld~---l-~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~~ 79 (156)
T PF15627_consen 7 GRRYLHLRVLGGKAFLDH---L-QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGSTA 79 (156)
T ss_pred CceEEEEEEeCchhHhhh---h-hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccch
Confidence 456799999998754210 0 00002233444455541 136889999998899999999999986442
Q ss_pred c------cEEEEEEEeeCCCCCCCccEEEEEECcc-ccCcce----EEEccCCCCC-ccCCeEEEEEEEE
Q 017257 316 L------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEF 373 (374)
Q Consensus 316 l------a~Lrf~V~D~d~~~~dd~iG~~~ipl~~-L~~GyR----~vpL~d~~g~-~~~~~~L~v~i~f 373 (374)
. .-|++.|---|..+...++|+.++.... |..|+. .|.|....++ ..+-+-|-++++.
T Consensus 80 ~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lEL 149 (156)
T PF15627_consen 80 TTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLEL 149 (156)
T ss_pred hHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEe
Confidence 1 2366777666655556899999988775 456764 4677776555 2344567777764
No 173
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=83.36 E-value=7.3 Score=42.49 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=59.5
Q ss_pred EEEEEEEeccccccCCCCCcccCCCCCCceEEEE--Ee-cCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEE
Q 017257 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG--IA-GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALL 319 (374)
Q Consensus 246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~--i~-g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~L 319 (374)
.++|+++++.....+ ...|-+|.|+ +. |...=+....|.-+...-+|.||+.++|+|...+ .|.|
T Consensus 344 ~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~ArL 414 (1076)
T KOG0904|consen 344 PFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMARL 414 (1076)
T ss_pred ceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhhh
Confidence 467888777654321 1234444444 33 3211122234444443468999999999987544 5788
Q ss_pred EEEEEeeC----------------CCCCCCccEEEEEECc----cccCcceEEEccC
Q 017257 320 RIEVHEYD----------------MSEKDDFGGQTCLPVS----ELKQGIRAVPLHD 356 (374)
Q Consensus 320 rf~V~D~d----------------~~~~dd~iG~~~ipl~----~L~~GyR~vpL~d 356 (374)
.|.|+.-- .....-.+||+.+-|- .|++|-+.+.+..
T Consensus 415 c~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh~W~ 471 (1076)
T KOG0904|consen 415 CLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLHMWP 471 (1076)
T ss_pred eeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEEecC
Confidence 88877531 1122447888887774 5788977665543
No 174
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=83.30 E-value=1.4 Score=47.98 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=72.3
Q ss_pred CCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc-
Q 017257 272 PDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI- 349 (374)
Q Consensus 272 ~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy- 349 (374)
.++|+.+.+... .-.+|..+.+. -+|.|.+.|+.-+...+ +.+.|+|.+.+..+-..++|.+.+|+-.+..|-
T Consensus 138 ~e~Ylt~~l~~~----~~~~t~~~~~f~e~s~~~f~~~~~~~h~~-g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHKA----RYRRTHVIYEFLENSRWSFSFDIGFAHKA-GYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeechh----hhhchhhhhcccccchhhhhccccccccc-cEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 578999998752 34578877777 49999998877665553 689999999887665678899999998888774
Q ss_pred --eEEEccCCCCCccC-CeEEEEEEEE
Q 017257 350 --RAVPLHDRKGERYK-SVKLLMHFEF 373 (374)
Q Consensus 350 --R~vpL~d~~g~~~~-~~~L~v~i~f 373 (374)
.+.++++.++.+.. ++++.+++.|
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~ 239 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGF 239 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEee
Confidence 36788888888764 3455555554
No 175
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=76.56 E-value=29 Score=34.19 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=69.8
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC-------CccEE
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-------ELALL 319 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p-------ela~L 319 (374)
+.|.|+.|.+.+.. + .-...|...+.| ....|..+..+-.|.||..+-|.+..- +-.-|
T Consensus 2 ivl~i~egr~F~~~-~--------~~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQR-P--------RHPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCC-C--------CccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 45788888887631 0 112355566655 356677777778999999999987532 22457
Q ss_pred EEEEEeeC-CCCCCCccEEEEEECccc---cCc-----ceEEEccCCCC
Q 017257 320 RIEVHEYD-MSEKDDFGGQTCLPVSEL---KQG-----IRAVPLHDRKG 359 (374)
Q Consensus 320 rf~V~D~d-~~~~dd~iG~~~ipl~~L---~~G-----yR~vpL~d~~g 359 (374)
++..+..| ..+..+.||...++|.+. ..+ .+|-+|+..++
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~ 116 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSS 116 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccccc
Confidence 78888777 456678999999999999 555 68999987744
No 176
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=72.49 E-value=17 Score=32.48 Aligned_cols=67 Identities=21% Similarity=0.235 Sum_probs=42.6
Q ss_pred eeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCCC------CCccEEEEEECc---cccCcceEEEc
Q 017257 288 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK------DDFGGQTCLPVS---ELKQGIRAVPL 354 (374)
Q Consensus 288 ~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~~------dd~iG~~~ipl~---~L~~GyR~vpL 354 (374)
....|.+...+-+|.|+|++...+... +..-|+|+.++-+...+ ...+|-+.+||- .|+.|...+|+
T Consensus 54 ~~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL~~~g~L~~g~~~LpV 131 (179)
T cd08696 54 TEAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPLLRNGRLQSGEFNLPV 131 (179)
T ss_pred eeEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEeeecCCEEecCCEEEEE
Confidence 346788877888999999888876533 34678999988543221 234677667763 24444444443
No 177
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=72.05 E-value=2.8 Score=39.28 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=30.2
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhhc-cceEEecCCC
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKPP 38 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk-~kiliK~K~~ 38 (374)
+|++.||+.++.++ .....+|++++|+ ||++|-....
T Consensus 122 ~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~~ 159 (271)
T cd08557 122 LLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYFG 159 (271)
T ss_pred HHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEECC
Confidence 47889999998875 4467899999999 9999886654
No 178
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=71.62 E-value=18 Score=32.48 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=43.9
Q ss_pred eeeeeeeccCCCCCccCcEEEEEeec--CCccEEEEEEEeeCCC--C-------CCCccEEEEEECcc----ccCcceEE
Q 017257 288 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMS--E-------KDDFGGQTCLPVSE----LKQGIRAV 352 (374)
Q Consensus 288 ~k~kTk~v~~~~nP~Wne~f~F~v~~--pela~Lrf~V~D~d~~--~-------~dd~iG~~~ipl~~----L~~GyR~v 352 (374)
....|.+...+-+|.|+|++...+.. .+..-|+|+.++-+.. . ....+|-+.+||-. |..|...+
T Consensus 56 ~~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~L 135 (185)
T cd08697 56 TSAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTP 135 (185)
T ss_pred eEEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEee
Confidence 34577787778899999988877643 2346789999885421 1 12356777777654 45555555
Q ss_pred Ecc
Q 017257 353 PLH 355 (374)
Q Consensus 353 pL~ 355 (374)
|..
T Consensus 136 pV~ 138 (185)
T cd08697 136 PVA 138 (185)
T ss_pred eEE
Confidence 443
No 179
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=69.63 E-value=3.3 Score=39.38 Aligned_cols=34 Identities=21% Similarity=0.598 Sum_probs=25.8
Q ss_pred ChHHHhhccccCCCCC----CCCCCCChhhhc--cceEEe
Q 017257 1 MVTQTLGEILFTPGSE----CLKEFPSPESLK--RRIIIS 34 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~----~~~~lpSPe~Lk--~kiliK 34 (374)
+|+++||++||.|+.. ....+|+.++|+ ||.||=
T Consensus 128 ~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~~GkrViv 167 (267)
T cd08590 128 LLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLNSGKQVVL 167 (267)
T ss_pred HHHHHhCCeEEcCCcccccccCCCCCCHHHHHhCCCEEEE
Confidence 4688999999998742 257899999996 665543
No 180
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=69.42 E-value=4.8 Score=42.51 Aligned_cols=85 Identities=24% Similarity=0.316 Sum_probs=56.0
Q ss_pred CCCceEEEEEecCCCCce-eeeeeeccCCCCCccCcEEEEEeecCCc---cEEEEEEEeeCCCCCCCccEEEEEECcc--
Q 017257 271 PPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSE-- 344 (374)
Q Consensus 271 ~~DpyV~V~i~g~~~d~~-k~kTk~v~~~~nP~Wne~f~F~v~~pel---a~Lrf~V~D~d~~~~dd~iG~~~ipl~~-- 344 (374)
.+|.||+..+...+.... --+|..+.-.---.|||=+.+.+..++| |.+++++||........|+|++++.+..
T Consensus 46 ~~~l~~~c~v~~~~~~~~lP~~ts~~~~~~~~~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~ 125 (843)
T KOG0906|consen 46 SSDLYVTCQVFAEGKPFALPVRTSYKAFSKRINWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKY 125 (843)
T ss_pred chhhhheeeeeccCCcccCCccccccccCCccchhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeeccc
Confidence 357787776653321110 1122221111011399999999988887 6899999998777778899999888753
Q ss_pred --ccCcceEEEcc
Q 017257 345 --LKQGIRAVPLH 355 (374)
Q Consensus 345 --L~~GyR~vpL~ 355 (374)
+++|...++|.
T Consensus 126 ~~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 126 GMLKQGMQDLKLW 138 (843)
T ss_pred chHhhhhhhcccc
Confidence 67888877774
No 181
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=68.13 E-value=23 Score=31.07 Aligned_cols=67 Identities=18% Similarity=0.348 Sum_probs=48.2
Q ss_pred CceEEEEEecCCCCceeeeeeecc--CCCCCccCcEEEEEee-cCCccEEEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257 273 DFYARVGIAGVPADTVMKKTKTLE--DNWIPSWNEEFEFPLS-VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 346 (374)
Q Consensus 273 DpyV~V~i~g~~~d~~k~kTk~v~--~~~nP~Wne~f~F~v~-~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~ 346 (374)
..|++|.+.+ +.-.+|+... .+|.=.|||.|.+.+. .|+ .|.+.||.... ..+..|+++.+||-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 4588888875 3334565433 3466678999999886 454 68899998775 55889999999986554
No 182
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=59.71 E-value=39 Score=29.16 Aligned_cols=121 Identities=18% Similarity=0.151 Sum_probs=56.6
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC--ceeeeeeeccCC-CC-CccCcEEEEEee---cCCc
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDN-WI-PSWNEEFEFPLS---VPEL 316 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d--~~k~kTk~v~~~-~n-P~Wne~f~F~v~---~pel 316 (374)
...|+|.|-... +. +...-.|||+.|++....+- +..+.|.+.... .| =.||.+...+.. .|+-
T Consensus 12 ~t~l~v~Iekig-lk--------da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G 82 (147)
T PF14186_consen 12 MTYLSVFIEKIG-LK--------DASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLPKG 82 (147)
T ss_dssp --EEEEEEEEEE--T--------TGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-TT
T ss_pred CceEEEEEEEEE-EC--------ChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCCCc
Confidence 345677665543 31 11234689999998743321 223446554211 22 234655444433 3455
Q ss_pred cEEEEEEEeeCCCC-CCCccEEEEEECccccCcceEEEcc----CCCCCc---cCCeEEEEEEEE
Q 017257 317 ALLRIEVHEYDMSE-KDDFGGQTCLPVSELKQGIRAVPLH----DRKGER---YKSVKLLMHFEF 373 (374)
Q Consensus 317 a~Lrf~V~D~d~~~-~dd~iG~~~ipl~~L~~GyR~vpL~----d~~g~~---~~~~~L~v~i~f 373 (374)
+.|-|+++++.... +-...+|+.+++++|+.|--.++|+ |...+. +..-.|.+|+.+
T Consensus 83 aai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely~KPtD~~rkkl~llt~k~~yl~l~~ 147 (147)
T PF14186_consen 83 AAIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELYKKPTDFKRKKLKLLTKKPLYLHLTL 147 (147)
T ss_dssp -EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--EESS--TT--S--BS-SSS--EEEEE
T ss_pred eEEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehhcCCcChhHhhhhhccCCCccEEEeC
Confidence 78999999976433 2346799999999999995556664 333332 233345566543
No 183
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=54.21 E-value=55 Score=26.60 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=43.0
Q ss_pred eeeeeeccCCCCCccCcEEEEEeecCCc-------cEEEEEEEeeCCCCCCCccEEEEEECcccc--Cc---ceEEEccC
Q 017257 289 MKKTKTLEDNWIPSWNEEFEFPLSVPEL-------ALLRIEVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHD 356 (374)
Q Consensus 289 k~kTk~v~~~~nP~Wne~f~F~v~~pel-------a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~--~G---yR~vpL~d 356 (374)
.+.|.++. +.+|.+|-+-.|.|...++ ..|.++++..- ...-..+|.+.+++..+- .| +-.+.|.+
T Consensus 12 tq~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g 89 (107)
T PF11618_consen 12 TQTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVG 89 (107)
T ss_dssp -EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-B
T ss_pred eeccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEec
Confidence 34566555 7899999999999876543 46888888754 233578999999999875 33 34578888
Q ss_pred CCCCccCCeEEEEEE
Q 017257 357 RKGERYKSVKLLMHF 371 (374)
Q Consensus 357 ~~g~~~~~~~L~v~i 371 (374)
..|+. .++|-..+
T Consensus 90 ~~~~~--~g~l~y~~ 102 (107)
T PF11618_consen 90 VSGED--FGTLEYWI 102 (107)
T ss_dssp SSS-T--SEEEEEEE
T ss_pred cCCCe--EEEEEEEE
Confidence 88883 45555444
No 184
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=51.18 E-value=38 Score=32.92 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=47.7
Q ss_pred ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323 (374)
Q Consensus 244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V 323 (374)
...|-+.++.|.+|..... ..+-..+.|+.++... ..+.||.+.....-=.|.|+|+.++...+ .+.+-|
T Consensus 50 tGiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~dr----qh~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~lv 119 (442)
T KOG1452|consen 50 TGILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPDR----QHPARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYLV 119 (442)
T ss_pred cceEEEEEecccccccChh----ccCceeeeeeeeeecc----cCccccccccCCCCccchhhceeecccce--eeeEEE
Confidence 3567788999998865321 1233457787776542 23344544333323358999998876543 578888
Q ss_pred EeeCCCC
Q 017257 324 HEYDMSE 330 (374)
Q Consensus 324 ~D~d~~~ 330 (374)
|.++...
T Consensus 120 ySW~pq~ 126 (442)
T KOG1452|consen 120 YSWPPQR 126 (442)
T ss_pred eecCchh
Confidence 8877544
No 185
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=47.45 E-value=38 Score=26.92 Aligned_cols=62 Identities=16% Similarity=0.274 Sum_probs=41.0
Q ss_pred CCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257 299 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 299 ~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
.+..|++.|.+++... .-|.+.|+-.|. ..+.|-..+.|...+.|+++ +| -+.+.||+.+.|
T Consensus 31 s~q~WDQ~Fti~LdRs--RELEI~VywrD~---RslCav~~lrLEd~~~~~~~-~l-------epqg~l~~ev~f 92 (98)
T cd08687 31 SNQAWDQSFTLELERS--RELEIAVYWRDW---RSLCAVKFLKLEDERHEVQL-DM-------EPQLCLVAELTF 92 (98)
T ss_pred ccccccceeEEEeecc--cEEEEEEEEecc---hhhhhheeeEhhhhccccee-cc-------ccccEEEEEEEe
Confidence 3678999999998643 347888987764 45778888888885555432 22 123456666654
No 186
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=38.98 E-value=24 Score=33.73 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=26.8
Q ss_pred HHHhhccccCCCCC---CCCCCCChhhhccceEEecCC
Q 017257 3 TQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 37 (374)
Q Consensus 3 ~~~~Gd~L~~~~~~---~~~~lpSPe~Lk~kiliK~K~ 37 (374)
.++|.+.+..+... ....+|+..|+||||++=.+-
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~rf 149 (279)
T cd08586 112 AEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRRF 149 (279)
T ss_pred HHHHHHHHhcccccccccCCCCCchHHhcccEEEEEec
Confidence 46677777776532 468999999999999987653
No 187
>PF07162 B9-C2: Ciliary basal body-associated, B9 protein; InterPro: IPR010796 Proteins in this entry include the MSK1 protein (Q9NXB0 from SWISSPROT) and other known or predicted flagellar basal body proteome components [] or cilia-containing species. Although the function is unknown, a cilia-specific role has been suggested for the poorly characterised B9 domain [, , ]. Mutations in MSK1 have been shown to cause Meckel syndrome type 1, a severe foetal development disorder that has been reported in most populations.
Probab=38.14 E-value=1.1e+02 Score=26.77 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=39.3
Q ss_pred CCccCcEEEEEeecCCc---cEEEEEEEeeCCCCCCCccEEEEEECccccCcceE--EEccCC
Q 017257 300 IPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRA--VPLHDR 357 (374)
Q Consensus 300 nP~Wne~f~F~v~~pel---a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~--vpL~d~ 357 (374)
.=+||..|++.+..... -.|.|+||..|..+++.+.|-..+.|-.- +|+.. ||+.-+
T Consensus 56 ~~~f~~P~d~~~~~~~~~gwP~L~l~V~~~D~~gr~~~~GYG~~~lP~~-pG~h~~~v~~wrP 117 (168)
T PF07162_consen 56 VAVFNHPFDLHFKSTNPQGWPQLVLQVYSLDSWGRDRVEGYGFCHLPTQ-PGRHEVEVPTWRP 117 (168)
T ss_pred ceEEeccEEEEEEeCCCCCCceEEEEEEEEcccCCeEEeEEeEEEeCCC-CceEEEEEEEEee
Confidence 34699888877654332 36889999999999999998766666433 77643 455443
No 188
>PF14924 DUF4497: Protein of unknown function (DUF4497)
Probab=36.43 E-value=57 Score=26.47 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=33.1
Q ss_pred CCCCccEEEEEECcccc-------------C---cc-eEEEccCCCCCccCCeEEEEEEEE
Q 017257 330 EKDDFGGQTCLPVSELK-------------Q---GI-RAVPLHDRKGERYKSVKLLMHFEF 373 (374)
Q Consensus 330 ~~dd~iG~~~ipl~~L~-------------~---Gy-R~vpL~d~~g~~~~~~~L~v~i~f 373 (374)
....+||.+.+++..+- + +. ...||+|..|+......|++++..
T Consensus 45 ~~~~liG~~~i~l~~~~~~i~~~~~~~~~~p~s~~~k~~f~L~~~~~~~~G~I~l~iRLsc 105 (112)
T PF14924_consen 45 PPPMLIGSCPISLAEAFNRILKDSAECNGQPSSKTIKGTFPLFDENGNPVGEISLYIRLSC 105 (112)
T ss_pred CccceeeEEEecHHHHHHHHHHHHHhhccCCCchhhcceeEeecCCCceeeeEEEEEEEec
Confidence 34678999999987652 1 22 256999999998888888888764
No 189
>PF14909 SPATA6: Spermatogenesis-assoc protein 6
Probab=22.86 E-value=4.9e+02 Score=22.29 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=50.7
Q ss_pred EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC-----------
Q 017257 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----------- 315 (374)
Q Consensus 247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe----------- 315 (374)
|.|+-+++-|.-+. ..-|.|..|.+.| +.++|+.....|-=.++|.|.|.-.++.
T Consensus 4 L~i~aVTCPGv~L~---------~~~~vyL~v~~lg-----~~~~T~~~ppvFPllfhek~~FeK~F~~~~dp~~l~~~L 69 (140)
T PF14909_consen 4 LEIHAVTCPGVWLC---------DKGDVYLSVCILG-----QYKRTRCLPPVFPLLFHEKFRFEKVFPNAVDPAQLADLL 69 (140)
T ss_pred EEEEEEecCCeEeC---------CCCCEEEEEEEcc-----cEeecccCCCcCCeeEeeEEEeEEEecCCCCHHHHHHHh
Confidence 55655655544331 1236799999998 4567876655444456999999754331
Q ss_pred -ccEEEEEEEeeCCCCCCCccEEEEEECc
Q 017257 316 -LALLRIEVHEYDMSEKDDFGGQTCLPVS 343 (374)
Q Consensus 316 -la~Lrf~V~D~d~~~~dd~iG~~~ipl~ 343 (374)
.-.++|+++...... ...++.+.-...
T Consensus 70 e~e~~~iELiQl~~~~-g~iLA~ye~n~r 97 (140)
T PF14909_consen 70 EDETVYIELIQLVPPA-GEILAYYEENTR 97 (140)
T ss_pred hcCcEEEEEEEEeCCC-CcEEEEEecccc
Confidence 236788888765443 567776654443
No 190
>PF06485 DUF1092: Protein of unknown function (DUF1092); InterPro: IPR009472 This family consists of several hypothetical proteins of unknown function all from photosynthetic organisms including plants and cyanobacteria.
Probab=20.90 E-value=48 Score=31.55 Aligned_cols=82 Identities=22% Similarity=0.234 Sum_probs=49.3
Q ss_pred cccccccCCCceEEeeccHHHHHHHHhhccccchh---ccccceeeeecCCcccCCC-CCCccccccccceeeeeccccC
Q 017257 124 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR---FTQRNLLRIYPKGIRVDSS-NYNPLIGWSHGAQMVAFNMQGH 199 (374)
Q Consensus 124 ~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~---~~~~~l~RvYP~g~R~~SS-N~~P~~~W~~G~QmvAlN~Qt~ 199 (374)
+.+++.. +.+...+|+=..+..+. +.+-.|-. .+..-=.-+-=-|.+|.|+ --.|+-.|-.|.+.|+|+|.+.
T Consensus 131 LPdaL~G--e~W~FvsLp~~~l~e~~-e~~i~fg~l~Pl~~~l~~~~~IPGv~I~s~~Ral~LA~Wl~glEp~~L~~~~~ 207 (270)
T PF06485_consen 131 LPDALRG--EKWAFVSLPAGDLREAF-EWPIPFGELLPLPLGLASDTPIPGVVIFSGRRALPLAAWLSGLEPVSLNYDPG 207 (270)
T ss_pred CChhhCC--CceEEEEccHHHHHhhh-ccCccccccCCCCCCCCcCCccceEEEecCcchhHHHHHhccCceEEEEEecC
Confidence 4444443 34566678777776655 22322222 1100000001137788888 8899999999999999999988
Q ss_pred Ccceeeeee
Q 017257 200 GRSLWLMHG 208 (374)
Q Consensus 200 d~~m~ln~~ 208 (374)
...+-|-.|
T Consensus 208 ~~~LiLEaG 216 (270)
T PF06485_consen 208 EPGLILEAG 216 (270)
T ss_pred CceEEEecC
Confidence 775555444
No 191
>PF12620 DUF3778: Protein of unknown function (DUF3778); InterPro: IPR022256 This domain family is found in eukaryotes, and is typically between 48 and 61 amino acids in length. There is a conserved LRF sequence motif.
Probab=20.73 E-value=51 Score=24.03 Aligned_cols=16 Identities=38% Similarity=0.727 Sum_probs=14.3
Q ss_pred ccccccccceeeeecc
Q 017257 181 PLIGWSHGAQMVAFNM 196 (374)
Q Consensus 181 P~~~W~~G~QmvAlN~ 196 (374)
|+.+|..|+|.|-|=|
T Consensus 36 ~~q~~~~gl~~~lLRf 51 (61)
T PF12620_consen 36 PVQFWSAGLQLVLLRF 51 (61)
T ss_pred CchhhhccceeeeeEE
Confidence 7899999999998866
No 192
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=20.31 E-value=72 Score=30.38 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=20.1
Q ss_pred ChHHHhhccccCCCCCCCCCCCChhhh
Q 017257 1 MVTQTLGEILFTPGSECLKEFPSPESL 27 (374)
Q Consensus 1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~L 27 (374)
+|.++||+.|+.+.. .....|+.++|
T Consensus 124 ~l~~~~g~~l~~~~~-~~~~~~TL~~l 149 (276)
T cd08622 124 LLRQELGDLILRRSR-NYGWGPTLSEI 149 (276)
T ss_pred HHHHHhccceecCcc-cccccCcHHHH
Confidence 367899999997753 44557999997
Done!