BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017258
(374 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1
Length = 478
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
MG+KKK+ K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T G+AIH +QVHK
Sbjct: 1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59
Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
E + VPNA PGR ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86
>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1
Length = 494
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
MG+KKK+ K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T G+AIH +QVHK
Sbjct: 1 MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59
Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
E + VPNA PGR ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86
>sp|Q8NI51|CTCFL_HUMAN Transcriptional repressor CTCFL OS=Homo sapiens GN=CTCFL PE=1 SV=2
Length = 663
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 14 CYYCDRE-FDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
C Y R+ + ++ + H K ++CH+CH + + +G M IH+LQ H ENV
Sbjct: 375 CSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENV 425
>sp|Q8IRH5|Y2199_DROME Zinc finger protein CG2199 OS=Drosophila melanogaster GN=CG2199
PE=1 SV=1
Length = 733
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 9 SSKVWCYYCDREFDDEKILVQHQKAKH-------FKCHVCHKKLSTAGGMAIHVLQVHKE 61
S+ C CD E K + +H K H FKCHVC K L+T + H + +H +
Sbjct: 413 SNNFQCEICDCELMTAKQMQEHMKTVHSIDKPKVFKCHVCEKSLATKQSLKTH-MTLHAD 471
Query: 62 NVTKVPNAKPGR----ESTDIEIYGMQGIPPDVLAAHYGEEEEEVPSKMAK 108
+ PN+ + E D++I G I ++ ++ P+K AK
Sbjct: 472 GA-EAPNSSKRKILQDEDEDVDILGTTQIENTAEKVEGPKKSQQSPTKAAK 521
>sp|Q9NSC2|SALL1_HUMAN Sal-like protein 1 OS=Homo sapiens GN=SALL1 PE=1 SV=2
Length = 1324
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 11 KVWCYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTAGGMAIHVLQVHKE 61
K C +C + F + L H ++ + FKC++C + ST G + +H Q HKE
Sbjct: 448 KHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVH-FQRHKE 501
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 6 KRVSSKVWCYYCDREFDDEKILVQHQKA----KHFKCHVCHKKLSTAGGMAIHVLQVHKE 61
+R + +C C + F L H++ K F C +C + +T G + +H+
Sbjct: 1128 RRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHM------ 1181
Query: 62 NVTKVPNAKPGRESTDIEIYG 82
T + N+ P R + + G
Sbjct: 1182 -GTHMWNSTPARRGRRLSVDG 1201
>sp|O88778|BSN_RAT Protein bassoon OS=Rattus norvegicus GN=Bsn PE=1 SV=3
Length = 3938
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 93 AHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAV------ 146
A EEE+E+ +K+ ++ Q + ++G YPP LG + S +
Sbjct: 2957 AELDEEEKEIDAKLKYLELGITQRKESLAKDRVGRDYPPLRGLGEHRDYLSDSELNQLRL 3016
Query: 147 --PVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASS------- 197
PAG V YP AAV P + QQP FP + SS
Sbjct: 3017 QGCTTPAGQYV------DYPASAAVPATPSGPTAF-QQPRFPPAATQYTAGSSGPTQNGF 3069
Query: 198 --------TSPALQPSPVVPPGMPSSTPPVTVSQPLF 226
T P+ P+P PPG P SQP F
Sbjct: 3070 LAHQAPTYTGPSTYPAPTYPPGTSYPAEPGLPSQPAF 3106
>sp|O88737|BSN_MOUSE Protein bassoon OS=Mus musculus GN=Bsn PE=1 SV=4
Length = 3942
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 93 AHYGEEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAV------ 146
A EEE+E+ +K+ ++ Q + + G YPP LG + S +
Sbjct: 2972 AELDEEEKEIDAKLKYLELGITQRKESLAKDRGGRDYPPLRGLGEHRDYLSDSELNQLRL 3031
Query: 147 --PVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFP-------------VQNVR 191
PAG V YP AAV P + QQP FP QN
Sbjct: 3032 QGCTTPAGQYV------DYPASAAVPATPSGPTAF-QQPRFPPAAPQYTAGSSGPTQNGF 3084
Query: 192 PP--LASSTSPALQPSPVVPPGMPSSTPPVTVSQPLF 226
P + T P+ P+P PPG P SQP F
Sbjct: 3085 PAHQAPTYTGPSTYPAPTYPPGTGYPAEPGLPSQPAF 3121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,026,408
Number of Sequences: 539616
Number of extensions: 7074374
Number of successful extensions: 45374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 1983
Number of HSP's that attempted gapping in prelim test: 31741
Number of HSP's gapped (non-prelim): 9259
length of query: 374
length of database: 191,569,459
effective HSP length: 119
effective length of query: 255
effective length of database: 127,355,155
effective search space: 32475564525
effective search space used: 32475564525
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)