Query 017259
Match_columns 374
No_of_seqs 137 out of 1426
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 07:00:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017259.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017259hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4992 ArgD Ornithine/acetylo 100.0 1E-59 2.2E-64 420.0 34.8 335 1-349 64-399 (404)
2 COG0160 GabT 4-aminobutyrate a 100.0 3.9E-51 8.4E-56 376.0 35.6 337 1-349 78-446 (447)
3 COG0161 BioA Adenosylmethionin 100.0 1E-50 2.2E-55 370.7 34.5 343 2-349 67-444 (449)
4 PLN02624 ornithine-delta-amino 100.0 1.4E-50 3.1E-55 387.0 37.1 373 1-373 97-473 (474)
5 KOG1402 Ornithine aminotransfe 100.0 5.8E-51 1.3E-55 348.0 28.4 344 1-346 81-426 (427)
6 TIGR03372 putres_am_tran putre 100.0 6.7E-48 1.4E-52 363.2 36.1 337 1-345 97-442 (442)
7 PRK11522 putrescine--2-oxoglut 100.0 1.4E-47 2.9E-52 363.6 36.2 341 1-350 104-453 (459)
8 TIGR03246 arg_catab_astC succi 100.0 1.2E-46 2.5E-51 354.6 35.9 337 2-346 58-394 (397)
9 PRK05965 hypothetical protein; 100.0 8.5E-47 1.8E-51 359.3 35.1 344 1-349 68-448 (459)
10 PRK01278 argD acetylornithine 100.0 1.7E-46 3.7E-51 353.6 36.8 334 2-346 54-387 (389)
11 PRK04612 argD acetylornithine 100.0 1.7E-46 3.7E-51 352.4 36.1 342 2-350 63-405 (408)
12 PRK07482 hypothetical protein; 100.0 2.9E-46 6.3E-51 355.9 36.6 345 1-349 72-455 (461)
13 PLN00144 acetylornithine trans 100.0 2.8E-46 6E-51 349.2 35.1 337 2-349 38-381 (382)
14 PRK07678 aminotransferase; Val 100.0 3.5E-46 7.5E-51 354.7 36.2 344 2-349 70-450 (451)
15 PRK12381 bifunctional succinyl 100.0 4.7E-46 1E-50 351.5 35.7 342 2-352 62-403 (406)
16 PRK06943 adenosylmethionine--8 100.0 4.8E-46 1E-50 353.3 35.3 342 2-349 77-447 (453)
17 PRK08742 adenosylmethionine--8 100.0 8.7E-46 1.9E-50 352.0 35.9 340 2-346 87-466 (472)
18 PRK07030 adenosylmethionine--8 100.0 1.1E-45 2.4E-50 351.5 35.7 342 2-349 70-447 (466)
19 PRK07481 hypothetical protein; 100.0 2.1E-45 4.5E-50 349.2 36.8 343 2-349 65-446 (449)
20 PRK04073 rocD ornithine--oxo-a 100.0 1.3E-45 2.9E-50 347.9 34.9 332 2-345 63-395 (396)
21 PRK07483 hypothetical protein; 100.0 1.8E-45 3.8E-50 348.8 35.1 344 2-349 53-438 (443)
22 PLN02760 4-aminobutyrate:pyruv 100.0 4.1E-45 8.8E-50 349.8 35.7 343 1-349 111-492 (504)
23 PRK07495 4-aminobutyrate amino 100.0 8.7E-45 1.9E-49 342.6 37.1 337 2-349 63-422 (425)
24 PRK06062 hypothetical protein; 100.0 5.4E-45 1.2E-49 346.2 35.7 337 1-349 75-446 (451)
25 PRK06916 adenosylmethionine--8 100.0 4E-45 8.6E-50 348.0 34.6 342 2-349 79-456 (460)
26 PRK06173 adenosylmethionine--8 100.0 4E-45 8.6E-50 344.6 34.1 337 2-346 67-424 (429)
27 PRK07986 adenosylmethionine--8 100.0 7.4E-45 1.6E-49 342.4 35.4 337 1-346 65-422 (428)
28 PRK03715 argD acetylornithine 100.0 6E-45 1.3E-49 341.1 34.4 333 2-349 59-394 (395)
29 KOG1404 Alanine-glyoxylate ami 100.0 2E-45 4.2E-50 321.5 28.8 330 2-341 73-432 (442)
30 PRK08593 4-aminobutyrate amino 100.0 2.3E-44 4.9E-49 341.7 36.6 341 2-353 65-434 (445)
31 PRK06105 aminotransferase; Pro 100.0 2.3E-44 5.1E-49 342.7 36.2 343 1-349 70-450 (460)
32 PRK07036 hypothetical protein; 100.0 3.2E-44 6.9E-49 341.9 36.0 342 2-349 74-453 (466)
33 PRK04013 argD acetylornithine/ 100.0 1.6E-44 3.5E-49 332.8 32.8 314 1-346 46-359 (364)
34 PRK13360 omega amino acid--pyr 100.0 4E-44 8.7E-49 339.4 36.2 340 2-346 69-439 (442)
35 PRK06541 hypothetical protein; 100.0 4.1E-44 8.9E-49 340.6 36.1 342 1-346 74-454 (460)
36 PRK09221 beta alanine--pyruvat 100.0 3.9E-44 8.4E-49 339.8 35.8 342 2-349 72-444 (445)
37 PRK05964 adenosylmethionine--8 100.0 3.4E-44 7.4E-49 340.3 35.1 342 2-349 65-423 (423)
38 PRK06777 4-aminobutyrate amino 100.0 6E-44 1.3E-48 337.4 36.6 335 2-346 63-420 (421)
39 PRK07480 putative aminotransfe 100.0 4.3E-44 9.3E-49 340.2 35.6 342 2-349 73-449 (456)
40 PRK06938 diaminobutyrate--2-ox 100.0 4.4E-44 9.5E-49 340.5 35.6 334 2-346 86-459 (464)
41 TIGR00700 GABAtrnsam 4-aminobu 100.0 5.2E-44 1.1E-48 338.5 35.9 335 2-346 56-419 (420)
42 PRK06058 4-aminobutyrate amino 100.0 5.4E-44 1.2E-48 339.9 36.0 335 2-346 79-441 (443)
43 PRK09792 4-aminobutyrate trans 100.0 5.1E-44 1.1E-48 337.9 35.5 335 2-346 63-420 (421)
44 TIGR02407 ectoine_ectB diamino 100.0 5E-44 1.1E-48 337.1 35.1 332 2-346 58-411 (412)
45 PRK05630 adenosylmethionine--8 100.0 5.3E-44 1.1E-48 336.7 34.8 334 2-346 63-419 (422)
46 PRK05093 argD bifunctional N-s 100.0 1.3E-43 2.9E-48 335.0 37.0 337 2-346 63-399 (403)
47 TIGR00709 dat 2,4-diaminobutyr 100.0 7.9E-44 1.7E-48 338.4 35.5 337 1-349 61-436 (442)
48 PRK06082 4-aminobutyrate amino 100.0 9.4E-44 2E-48 338.1 35.9 337 1-349 93-452 (459)
49 PRK08117 4-aminobutyrate amino 100.0 7.5E-44 1.6E-48 339.0 35.2 337 2-349 66-430 (433)
50 PRK05639 4-aminobutyrate amino 100.0 1.2E-43 2.7E-48 336.8 36.5 337 2-350 76-445 (457)
51 PRK06917 hypothetical protein; 100.0 1.4E-43 2.9E-48 336.3 36.2 344 2-349 54-438 (447)
52 PRK12403 putative aminotransfe 100.0 1.5E-43 3.2E-48 337.2 35.9 343 1-349 76-453 (460)
53 PRK08360 4-aminobutyrate amino 100.0 2.5E-43 5.4E-48 334.1 36.9 338 2-351 64-429 (443)
54 PRK09264 diaminobutyrate--2-ox 100.0 1.7E-43 3.6E-48 335.1 34.4 335 2-350 62-418 (425)
55 PRK06931 diaminobutyrate--2-ox 100.0 2.2E-43 4.9E-48 335.5 35.0 334 2-346 81-453 (459)
56 TIGR01885 Orn_aminotrans ornit 100.0 3.7E-43 8E-48 332.0 35.9 341 2-346 60-401 (401)
57 KOG1401 Acetylornithine aminot 100.0 1.3E-43 2.8E-48 312.4 30.1 339 2-349 79-431 (433)
58 PRK03244 argD acetylornithine 100.0 3.9E-43 8.4E-48 331.9 35.5 327 2-349 66-395 (398)
59 PRK05769 4-aminobutyrate amino 100.0 1.1E-42 2.4E-47 329.8 36.4 333 2-346 77-438 (441)
60 PRK00854 rocD ornithine--oxo-a 100.0 7.9E-43 1.7E-47 330.2 35.1 337 2-346 64-400 (401)
61 PRK02936 argD acetylornithine 100.0 1.3E-42 2.9E-47 326.1 35.8 326 2-345 52-377 (377)
62 PRK06918 4-aminobutyrate amino 100.0 1.6E-42 3.4E-47 330.8 35.5 337 2-349 77-444 (451)
63 PTZ00125 ornithine aminotransf 100.0 3.1E-42 6.7E-47 326.2 37.0 344 2-350 54-397 (400)
64 PRK02627 acetylornithine amino 100.0 2.2E-42 4.8E-47 327.0 35.9 332 2-346 62-393 (396)
65 PLN02974 adenosylmethionine-8- 100.0 4.7E-42 1E-46 341.0 36.1 342 1-345 388-816 (817)
66 TIGR00508 bioA adenosylmethion 100.0 2.8E-41 6E-46 319.3 35.4 337 2-346 68-425 (427)
67 PRK08297 L-lysine aminotransfe 100.0 2.5E-41 5.4E-46 320.5 33.4 338 3-349 71-442 (443)
68 PRK06148 hypothetical protein; 100.0 3.6E-41 7.8E-46 346.4 37.2 335 2-349 645-1011(1013)
69 COG0001 HemL Glutamate-1-semia 100.0 7.4E-41 1.6E-45 302.2 33.7 332 2-349 76-429 (432)
70 PRK12389 glutamate-1-semialdeh 100.0 7.4E-41 1.6E-45 317.0 35.2 329 2-346 76-426 (428)
71 TIGR00699 GABAtrns_euk 4-amino 100.0 8E-41 1.7E-45 315.5 34.4 333 2-345 81-464 (464)
72 cd00610 OAT_like Acetyl ornith 100.0 2.3E-40 5E-45 315.0 35.5 334 2-345 59-413 (413)
73 PLN02482 glutamate-1-semialdeh 100.0 8.4E-40 1.8E-44 310.5 35.2 330 2-346 122-472 (474)
74 PRK06149 hypothetical protein; 100.0 5.9E-40 1.3E-44 337.4 36.6 334 2-346 606-969 (972)
75 TIGR00713 hemL glutamate-1-sem 100.0 7E-40 1.5E-44 311.7 34.0 330 2-346 71-421 (423)
76 TIGR00707 argD acetylornithine 100.0 1.4E-39 3.1E-44 306.0 34.5 330 2-345 50-379 (379)
77 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.6E-39 3.5E-44 307.9 34.1 334 2-343 63-430 (431)
78 PRK08088 4-aminobutyrate amino 100.0 4.1E-39 8.8E-44 305.8 36.7 335 2-346 64-422 (425)
79 PRK00615 glutamate-1-semialdeh 100.0 4.2E-39 9.1E-44 303.5 35.9 332 2-350 76-430 (433)
80 PRK04260 acetylornithine amino 100.0 5.6E-39 1.2E-43 301.0 34.9 323 2-344 51-374 (375)
81 PRK07046 aminotransferase; Val 100.0 6.4E-39 1.4E-43 304.2 35.3 328 2-349 98-451 (453)
82 PF00202 Aminotran_3: Aminotra 100.0 3.5E-40 7.6E-45 303.0 24.8 286 2-291 39-338 (339)
83 PRK00062 glutamate-1-semialdeh 100.0 8.5E-39 1.8E-43 303.3 32.7 332 2-349 73-425 (426)
84 PRK06209 glutamate-1-semialdeh 100.0 8.1E-33 1.8E-37 262.2 32.0 320 2-349 71-406 (431)
85 KOG1403 Predicted alanine-glyo 100.0 2E-33 4.2E-38 237.9 23.6 333 2-346 68-436 (452)
86 COG0436 Aspartate/tyrosine/aro 100.0 2.6E-33 5.7E-38 261.2 26.0 316 2-346 48-390 (393)
87 PLN02822 serine palmitoyltrans 100.0 2.7E-30 5.9E-35 247.6 25.9 311 2-349 130-478 (481)
88 PRK06207 aspartate aminotransf 100.0 2.9E-29 6.3E-34 237.2 28.1 304 18-349 79-403 (405)
89 PRK07324 transaminase; Validat 100.0 3.2E-29 6.9E-34 234.5 26.4 314 2-346 45-369 (373)
90 PRK13393 5-aminolevulinate syn 100.0 2.6E-29 5.6E-34 238.0 26.1 309 2-349 66-397 (406)
91 PRK07682 hypothetical protein; 100.0 3.8E-29 8.2E-34 235.0 25.9 298 18-346 58-375 (378)
92 TIGR01821 5aminolev_synth 5-am 100.0 5.7E-29 1.2E-33 235.6 26.3 309 2-349 66-397 (402)
93 PRK09064 5-aminolevulinate syn 100.0 1.1E-28 2.4E-33 234.1 26.5 309 2-349 67-398 (407)
94 PRK06108 aspartate aminotransf 100.0 2E-28 4.4E-33 230.5 27.2 299 18-346 62-381 (382)
95 PLN03227 serine palmitoyltrans 100.0 2.6E-28 5.7E-33 229.0 26.8 313 2-349 19-383 (392)
96 PRK15481 transcriptional regul 100.0 2.8E-28 6.1E-33 232.7 27.0 286 24-346 124-430 (431)
97 COG1167 ARO8 Transcriptional r 100.0 2.4E-28 5.3E-33 232.8 26.3 298 18-346 133-454 (459)
98 PRK01533 histidinol-phosphate 100.0 1.5E-28 3.2E-33 229.1 24.3 288 17-346 60-354 (366)
99 PLN00175 aminotransferase fami 100.0 3.7E-28 8.1E-33 230.0 27.4 297 20-346 94-412 (413)
100 PRK07681 aspartate aminotransf 100.0 3.3E-28 7.1E-33 230.0 26.4 292 21-343 73-384 (399)
101 PRK03317 histidinol-phosphate 100.0 3.9E-28 8.5E-33 227.2 25.8 287 18-346 62-363 (368)
102 PRK07366 succinyldiaminopimela 100.0 1.4E-27 3.1E-32 225.0 27.5 293 21-344 72-387 (388)
103 PRK07179 hypothetical protein; 100.0 1.5E-27 3.3E-32 226.0 27.6 302 2-346 75-397 (407)
104 COG0079 HisC Histidinol-phosph 100.0 1.1E-27 2.4E-32 219.6 25.7 285 17-346 53-353 (356)
105 PRK06225 aspartate aminotransf 100.0 1.4E-27 3.1E-32 224.4 26.9 301 21-350 66-378 (380)
106 KOG1405 4-aminobutyrate aminot 100.0 9.5E-28 2.1E-32 207.7 23.2 314 22-346 120-482 (484)
107 PRK08960 hypothetical protein; 100.0 2E-27 4.4E-32 223.8 27.5 278 35-346 91-386 (387)
108 PRK05957 aspartate aminotransf 100.0 2.5E-27 5.3E-32 223.2 28.0 300 18-349 66-386 (389)
109 PRK07309 aromatic amino acid a 100.0 2.3E-27 5E-32 223.6 27.3 285 37-349 92-389 (391)
110 PRK06348 aspartate aminotransf 100.0 2.4E-27 5.2E-32 223.0 27.2 293 21-344 70-382 (384)
111 KOG0257 Kynurenine aminotransf 100.0 1.2E-28 2.6E-33 219.2 17.0 318 2-342 51-414 (420)
112 PLN02187 rooty/superroot1 100.0 3E-27 6.6E-32 226.1 27.9 305 20-353 107-443 (462)
113 COG0156 BioF 7-keto-8-aminopel 100.0 2.7E-27 5.9E-32 216.4 26.2 303 2-344 60-387 (388)
114 PRK12414 putative aminotransfe 100.0 1.6E-27 3.5E-32 224.1 25.5 294 18-343 67-383 (384)
115 PRK09082 methionine aminotrans 100.0 2.3E-27 5E-32 223.3 25.9 294 18-343 68-385 (386)
116 PRK08636 aspartate aminotransf 100.0 3.9E-27 8.6E-32 222.9 27.3 306 18-346 72-399 (403)
117 PRK09148 aminotransferase; Val 100.0 2.4E-27 5.2E-32 224.3 25.7 296 21-346 72-389 (405)
118 TIGR01822 2am3keto_CoA 2-amino 100.0 3.5E-27 7.5E-32 223.0 26.7 308 2-349 59-390 (393)
119 PRK08361 aspartate aminotransf 100.0 3.7E-27 8.1E-32 222.3 26.7 301 20-346 69-389 (391)
120 PRK06425 histidinol-phosphate 100.0 1.6E-27 3.4E-32 219.8 23.4 283 17-345 36-331 (332)
121 PRK06290 aspartate aminotransf 100.0 4.3E-27 9.4E-32 222.2 26.9 302 21-349 85-406 (410)
122 PRK07505 hypothetical protein; 100.0 3E-27 6.4E-32 223.6 25.7 309 2-346 67-398 (402)
123 PRK09147 succinyldiaminopimela 100.0 4.9E-27 1.1E-31 221.9 27.1 292 18-346 66-395 (396)
124 PRK08153 histidinol-phosphate 100.0 2.6E-27 5.6E-32 221.4 24.8 290 18-350 64-367 (369)
125 TIGR03537 DapC succinyldiamino 100.0 7.2E-27 1.6E-31 217.1 27.4 294 21-343 40-349 (350)
126 PRK13392 5-aminolevulinate syn 100.0 4.3E-27 9.2E-32 223.2 26.0 309 2-349 67-398 (410)
127 PTZ00433 tyrosine aminotransfe 100.0 8.5E-27 1.8E-31 221.1 27.7 290 35-350 103-410 (412)
128 PLN02955 8-amino-7-oxononanoat 100.0 5.3E-27 1.1E-31 219.3 25.7 314 2-346 123-460 (476)
129 PRK02610 histidinol-phosphate 100.0 3.8E-27 8.2E-32 220.8 24.9 294 19-349 64-372 (374)
130 TIGR03540 DapC_direct LL-diami 100.0 6.3E-27 1.4E-31 220.3 26.1 292 21-343 71-382 (383)
131 PRK08068 transaminase; Reviewe 100.0 8.5E-27 1.8E-31 219.7 27.0 292 21-343 74-385 (389)
132 TIGR01264 tyr_amTase_E tyrosin 100.0 9.6E-27 2.1E-31 220.3 27.1 301 20-346 72-398 (401)
133 PRK07683 aminotransferase A; V 100.0 1E-26 2.2E-31 218.9 27.1 294 21-346 65-382 (387)
134 PRK05958 8-amino-7-oxononanoat 100.0 6.9E-27 1.5E-31 220.4 26.0 305 2-345 60-385 (385)
135 PRK06939 2-amino-3-ketobutyrat 100.0 9.2E-27 2E-31 220.5 26.2 308 2-349 63-394 (397)
136 PRK09276 LL-diaminopimelate am 100.0 9.9E-27 2.2E-31 219.1 26.0 291 22-343 74-384 (385)
137 PLN00145 tyrosine/nicotianamin 100.0 1.8E-26 3.9E-31 219.3 27.6 300 21-350 98-426 (430)
138 PRK03158 histidinol-phosphate 100.0 5.9E-27 1.3E-31 218.6 23.6 287 18-344 61-358 (359)
139 COG1168 MalY Bifunctional PLP- 100.0 3.2E-26 6.8E-31 201.8 26.5 321 1-349 44-387 (388)
140 PLN02483 serine palmitoyltrans 100.0 2.8E-26 6.1E-31 220.4 28.4 327 2-370 122-486 (489)
141 PRK05942 aspartate aminotransf 100.0 1.2E-26 2.7E-31 219.0 25.5 292 21-343 77-388 (394)
142 PRK08912 hypothetical protein; 100.0 2.3E-26 5E-31 216.7 26.2 297 20-346 66-385 (387)
143 PRK05664 threonine-phosphate d 100.0 1.8E-26 3.9E-31 212.5 24.6 270 24-346 52-327 (330)
144 PLN00143 tyrosine/nicotianamin 100.0 3.1E-26 6.6E-31 216.9 26.8 304 18-350 75-406 (409)
145 PLN02656 tyrosine transaminase 100.0 3.8E-26 8.3E-31 216.4 27.4 300 21-350 73-405 (409)
146 PRK08175 aminotransferase; Val 100.0 3.8E-26 8.2E-31 215.7 26.8 295 20-346 70-388 (395)
147 TIGR00858 bioF 8-amino-7-oxono 100.0 3.6E-26 7.8E-31 213.5 25.9 301 2-342 37-360 (360)
148 TIGR01825 gly_Cac_T_rel pyrido 100.0 4.7E-26 1E-30 214.7 26.7 305 2-346 54-380 (385)
149 PRK13355 bifunctional HTH-doma 100.0 1.9E-26 4.1E-31 224.3 24.7 296 20-346 188-513 (517)
150 PRK02731 histidinol-phosphate 100.0 3.4E-26 7.5E-31 214.2 25.4 286 18-346 64-365 (367)
151 PRK06107 aspartate aminotransf 100.0 5.6E-26 1.2E-30 215.0 26.9 302 18-349 71-401 (402)
152 PRK06855 aminotransferase; Val 100.0 5.5E-26 1.2E-30 216.5 27.0 306 18-346 74-428 (433)
153 PRK07337 aminotransferase; Val 100.0 4.4E-26 9.5E-31 214.9 25.9 281 35-345 89-387 (388)
154 PLN02376 1-aminocyclopropane-1 100.0 5.9E-26 1.3E-30 218.3 27.2 295 20-346 97-437 (496)
155 PRK07777 aminotransferase; Val 100.0 6E-26 1.3E-30 213.9 26.6 296 23-346 67-385 (387)
156 PRK07550 hypothetical protein; 100.0 4.2E-26 9E-31 214.9 25.4 296 19-344 69-384 (386)
157 PRK06358 threonine-phosphate d 100.0 7.4E-26 1.6E-30 210.4 26.3 281 18-345 51-353 (354)
158 PRK07865 N-succinyldiaminopime 100.0 4.4E-26 9.5E-31 213.1 24.8 281 18-342 63-363 (364)
159 PRK14807 histidinol-phosphate 100.0 6E-26 1.3E-30 211.0 25.5 284 18-345 56-350 (351)
160 PRK05764 aspartate aminotransf 99.9 6.4E-26 1.4E-30 214.3 26.0 296 22-346 69-390 (393)
161 TIGR03539 DapC_actino succinyl 99.9 2.3E-26 5E-31 214.2 22.6 280 18-341 57-356 (357)
162 PRK07568 aspartate aminotransf 99.9 1.3E-25 2.9E-30 212.4 28.2 297 21-350 66-394 (397)
163 TIGR03538 DapC_gpp succinyldia 99.9 6.2E-26 1.3E-30 214.2 25.4 291 20-344 67-392 (393)
164 PRK14809 histidinol-phosphate 99.9 4.8E-26 1E-30 212.3 24.2 287 18-346 62-356 (357)
165 PRK08363 alanine aminotransfer 99.9 1.3E-25 2.8E-30 212.3 27.3 298 20-346 69-393 (398)
166 PLN03026 histidinol-phosphate 99.9 1.1E-25 2.4E-30 211.1 25.6 286 18-344 83-379 (380)
167 TIGR01265 tyr_nico_aTase tyros 99.9 1.9E-25 4.1E-30 211.4 27.4 298 20-346 72-400 (403)
168 PRK01688 histidinol-phosphate 99.9 4E-26 8.7E-31 212.0 22.2 285 17-342 53-351 (351)
169 PRK05839 hypothetical protein; 99.9 8.3E-26 1.8E-30 211.7 24.0 288 20-346 63-373 (374)
170 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.9E-25 4.2E-30 208.9 25.8 291 21-349 51-369 (370)
171 PTZ00377 alanine aminotransfer 99.9 2.5E-25 5.5E-30 214.7 27.3 303 19-346 117-474 (481)
172 PRK00950 histidinol-phosphate 99.9 1.9E-25 4.1E-30 208.7 25.3 285 18-346 66-361 (361)
173 PLN02450 1-aminocyclopropane-1 99.9 2.2E-25 4.8E-30 213.6 25.5 305 20-350 89-432 (468)
174 KOG0259 Tyrosine aminotransfer 99.9 5.3E-25 1.2E-29 192.8 25.4 320 2-350 85-435 (447)
175 PRK09105 putative aminotransfe 99.9 1.9E-25 4.2E-30 208.6 24.0 285 18-346 75-369 (370)
176 PRK08056 threonine-phosphate d 99.9 2.6E-25 5.7E-30 207.0 24.9 290 18-346 52-354 (356)
177 PRK03321 putative aminotransfe 99.9 1.6E-25 3.4E-30 208.5 23.3 285 18-346 54-350 (352)
178 TIGR03392 FeS_syn_CsdA cystein 99.9 8.6E-25 1.9E-29 206.9 28.5 295 22-349 61-396 (398)
179 PRK09440 avtA valine--pyruvate 99.9 1.4E-25 3.1E-30 213.3 23.3 305 20-346 77-410 (416)
180 cd06454 KBL_like KBL_like; thi 99.9 5.7E-25 1.2E-29 204.6 26.7 305 2-344 22-348 (349)
181 PLN02607 1-aminocyclopropane-1 99.9 4E-25 8.6E-30 210.3 25.8 298 20-346 98-436 (447)
182 PRK04870 histidinol-phosphate 99.9 3.8E-25 8.3E-30 206.2 24.1 286 18-345 60-356 (356)
183 PRK04781 histidinol-phosphate 99.9 4.8E-25 1.1E-29 205.6 24.1 293 18-346 56-362 (364)
184 PRK07590 L,L-diaminopimelate a 99.9 3.7E-25 8E-30 209.8 23.2 283 35-344 98-408 (409)
185 PRK05166 histidinol-phosphate 99.9 6.4E-25 1.4E-29 205.6 24.4 289 18-346 68-370 (371)
186 PLN02721 threonine aldolase 99.9 1.9E-24 4.2E-29 201.4 27.6 302 17-346 36-351 (353)
187 PLN02231 alanine transaminase 99.9 9.4E-25 2E-29 211.2 26.2 304 18-346 169-526 (534)
188 PRK09275 aspartate aminotransf 99.9 4.6E-25 1E-29 210.6 23.7 310 16-346 133-516 (527)
189 PRK06959 putative threonine-ph 99.9 6.3E-25 1.4E-29 202.7 23.8 275 18-349 51-334 (339)
190 PTZ00376 aspartate aminotransf 99.9 3.2E-25 7E-30 209.8 22.5 299 18-346 73-402 (404)
191 PRK05387 histidinol-phosphate 99.9 5.1E-25 1.1E-29 205.2 23.4 284 18-346 57-352 (353)
192 PRK06836 aspartate aminotransf 99.9 1.5E-24 3.3E-29 204.6 26.8 293 20-349 72-392 (394)
193 TIGR01141 hisC histidinol-phos 99.9 3.2E-25 6.8E-30 206.0 21.8 283 19-342 52-346 (346)
194 PRK08637 hypothetical protein; 99.9 1.4E-24 3E-29 204.5 26.2 303 20-349 47-387 (388)
195 TIGR03542 DAPAT_plant LL-diami 99.9 5.2E-25 1.1E-29 208.4 23.2 300 19-344 73-401 (402)
196 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.4E-24 3E-29 200.0 24.5 280 18-345 51-345 (346)
197 TIGR01140 L_thr_O3P_dcar L-thr 99.9 8.7E-25 1.9E-29 201.4 23.0 274 18-341 44-329 (330)
198 PRK08354 putative aminotransfe 99.9 2.5E-24 5.4E-29 196.7 25.7 265 22-345 41-310 (311)
199 PRK09265 aminotransferase AlaT 99.9 4.2E-24 9.1E-29 202.4 28.0 284 35-346 94-400 (404)
200 PRK14808 histidinol-phosphate 99.9 4.1E-25 8.8E-30 203.7 20.3 271 18-343 53-333 (335)
201 PF00155 Aminotran_1_2: Aminot 99.9 6E-25 1.3E-29 205.6 21.8 286 20-341 43-363 (363)
202 PRK10874 cysteine sulfinate de 99.9 3.6E-24 7.8E-29 202.8 26.9 296 21-349 63-399 (401)
203 PRK07392 threonine-phosphate d 99.9 3.4E-24 7.4E-29 200.0 25.2 290 18-346 54-358 (360)
204 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4.8E-24 1E-28 198.8 26.1 313 2-345 12-355 (355)
205 COG0520 csdA Selenocysteine ly 99.9 1.6E-24 3.5E-29 201.9 21.2 290 20-346 65-404 (405)
206 PRK04635 histidinol-phosphate 99.9 1.8E-24 3.9E-29 201.3 21.4 283 18-344 57-352 (354)
207 PRK09257 aromatic amino acid a 99.9 3.8E-24 8.2E-29 202.2 23.6 299 18-345 70-396 (396)
208 cd00609 AAT_like Aspartate ami 99.9 4.9E-24 1.1E-28 198.1 23.7 289 17-342 32-349 (350)
209 TIGR03801 asp_4_decarbox aspar 99.9 5.2E-24 1.1E-28 203.2 23.9 290 38-346 157-515 (521)
210 TIGR02326 transamin_PhnW 2-ami 99.9 1.7E-23 3.7E-28 195.6 26.9 291 20-346 34-361 (363)
211 cd06451 AGAT_like Alanine-glyo 99.9 1.2E-23 2.6E-28 196.3 25.5 291 20-346 31-356 (356)
212 cd06453 SufS_like Cysteine des 99.9 1E-23 2.2E-28 197.9 25.3 285 21-341 43-373 (373)
213 PRK05937 8-amino-7-oxononanoat 99.9 5.4E-23 1.2E-27 192.4 28.3 283 19-349 54-351 (370)
214 PLN02672 methionine S-methyltr 99.9 2.8E-23 6.1E-28 210.1 26.6 299 19-346 732-1079(1082)
215 PRK09295 bifunctional cysteine 99.9 1E-22 2.2E-27 193.1 28.4 289 21-346 67-403 (406)
216 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.6E-23 2.1E-27 191.7 26.5 294 20-349 62-382 (387)
217 PRK13520 L-tyrosine decarboxyl 99.9 1.8E-22 4E-27 189.4 27.2 286 23-346 61-370 (371)
218 PLN02397 aspartate transaminas 99.9 6.9E-23 1.5E-27 194.6 24.0 253 71-346 143-420 (423)
219 TIGR01979 sufS cysteine desulf 99.9 2.7E-22 5.9E-27 190.2 27.8 288 22-346 63-400 (403)
220 cd00613 GDC-P Glycine cleavage 99.9 7.1E-23 1.5E-27 193.9 23.0 287 20-341 63-398 (398)
221 cd06502 TA_like Low-specificit 99.9 8.3E-23 1.8E-27 189.2 22.9 294 17-343 28-337 (338)
222 TIGR03402 FeS_nifS cysteine de 99.9 3.7E-22 8E-27 187.7 26.6 293 22-350 43-374 (379)
223 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.2E-22 4.8E-27 187.9 24.9 297 20-345 43-360 (361)
224 PRK13479 2-aminoethylphosphona 99.9 4.7E-22 1E-26 186.3 27.1 296 21-349 37-364 (368)
225 PRK10534 L-threonine aldolase; 99.9 8.6E-23 1.9E-27 188.7 21.5 290 19-346 32-332 (333)
226 PRK03967 histidinol-phosphate 99.9 1.2E-22 2.6E-27 187.7 22.1 273 18-346 52-333 (337)
227 PLN02409 serine--glyoxylate am 99.9 3.9E-22 8.4E-27 188.3 25.7 309 2-349 22-373 (401)
228 COG0399 WecE Predicted pyridox 99.9 2.3E-22 5E-27 182.7 23.1 303 2-346 19-372 (374)
229 PLN02855 Bifunctional selenocy 99.9 1.4E-22 3.1E-27 193.1 22.2 290 23-350 78-420 (424)
230 KOG1360 5-aminolevulinate synt 99.9 5.4E-22 1.2E-26 174.7 23.7 307 2-349 192-525 (570)
231 KOG0634 Aromatic amino acid am 99.9 1.5E-21 3.3E-26 174.1 26.8 304 19-350 98-468 (472)
232 PRK13238 tnaA tryptophanase/L- 99.9 4.2E-21 9.2E-26 182.8 31.0 316 18-353 75-438 (460)
233 KOG0256 1-aminocyclopropane-1- 99.9 1.1E-21 2.5E-26 173.5 24.9 292 20-346 124-460 (471)
234 COG1104 NifS Cysteine sulfinat 99.9 3.2E-22 7E-27 180.1 21.9 298 21-351 44-380 (386)
235 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.1E-22 1.1E-26 188.0 24.6 291 21-341 60-397 (397)
236 PRK07908 hypothetical protein; 99.9 3.9E-22 8.4E-27 185.4 23.1 274 21-346 58-346 (349)
237 TIGR02379 ECA_wecE TDP-4-keto- 99.9 6.5E-22 1.4E-26 184.5 24.5 303 2-345 15-375 (376)
238 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.3E-21 2.9E-26 183.9 24.4 290 21-343 44-375 (376)
239 PLN02368 alanine transaminase 99.9 1.2E-22 2.7E-27 190.8 17.1 246 20-288 110-392 (407)
240 PRK02948 cysteine desulfurase; 99.9 1.5E-21 3.2E-26 183.8 23.1 296 21-349 43-375 (381)
241 PLN02242 methionine gamma-lyas 99.9 2.8E-22 6.1E-27 188.9 18.1 298 13-346 68-414 (418)
242 cd00614 CGS_like CGS_like: Cys 99.9 1.9E-22 4E-27 188.4 16.0 292 13-345 32-368 (369)
243 TIGR03812 tyr_de_CO2_Arch tyro 99.9 9.9E-21 2.1E-25 177.7 26.5 286 21-343 59-372 (373)
244 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 4.6E-21 9.9E-26 179.5 23.9 302 3-345 16-374 (375)
245 KOG1368 Threonine aldolase [Am 99.9 2.3E-21 4.9E-26 164.8 19.0 319 2-346 36-368 (384)
246 cd00617 Tnase_like Tryptophana 99.9 6.1E-21 1.3E-25 179.2 23.4 315 17-353 49-413 (431)
247 TIGR01814 kynureninase kynuren 99.9 2.9E-20 6.4E-25 176.2 27.5 286 32-345 80-405 (406)
248 TIGR01437 selA_rel uncharacter 99.9 1.5E-20 3.3E-25 174.9 23.5 291 19-345 43-363 (363)
249 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-20 3.2E-25 175.2 23.1 296 2-342 3-352 (352)
250 PRK06767 methionine gamma-lyas 99.9 3E-21 6.5E-26 181.1 18.2 291 13-346 53-384 (386)
251 PRK08249 cystathionine gamma-s 99.9 8.3E-21 1.8E-25 178.1 20.5 293 13-346 56-392 (398)
252 PRK06234 methionine gamma-lyas 99.9 7.1E-21 1.5E-25 179.1 20.0 294 13-346 56-396 (400)
253 cd06450 DOPA_deC_like DOPA dec 99.9 1.9E-20 4E-25 174.0 22.2 283 22-343 39-344 (345)
254 PF00266 Aminotran_5: Aminotra 99.9 1.4E-20 3E-25 176.5 21.2 282 20-337 42-371 (371)
255 KOG1359 Glycine C-acetyltransf 99.9 1.8E-20 3.9E-25 159.0 19.6 302 2-346 88-411 (417)
256 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.5E-21 7.7E-26 180.2 17.0 257 13-307 46-319 (380)
257 PRK07049 methionine gamma-lyas 99.9 8.5E-21 1.8E-25 179.5 19.6 296 13-346 75-425 (427)
258 TIGR03403 nifS_epsilon cystein 99.9 5.8E-20 1.3E-24 173.0 24.7 288 24-350 42-377 (382)
259 PRK08247 cystathionine gamma-s 99.9 1.3E-20 2.8E-25 175.6 19.3 288 13-346 44-363 (366)
260 COG0075 Serine-pyruvate aminot 99.9 1.8E-19 4E-24 163.6 25.9 296 20-349 37-364 (383)
261 PLN02651 cysteine desulfurase 99.9 2.2E-20 4.7E-25 174.6 20.5 276 21-335 43-364 (364)
262 COG3977 Alanine-alpha-ketoisov 99.9 1.1E-19 2.4E-24 154.7 22.5 315 14-346 71-410 (417)
263 PRK11658 UDP-4-amino-4-deoxy-L 99.9 6.3E-20 1.4E-24 171.9 23.3 306 2-346 18-378 (379)
264 TIGR02006 IscS cysteine desulf 99.9 1.3E-19 2.7E-24 171.6 25.3 288 21-349 47-378 (402)
265 cd00378 SHMT Serine-glycine hy 99.9 1E-19 2.2E-24 172.6 24.6 287 28-346 72-384 (402)
266 COG2008 GLY1 Threonine aldolas 99.9 9.5E-20 2.1E-24 160.7 22.0 316 2-345 14-341 (342)
267 PRK08045 cystathionine gamma-s 99.9 4.7E-20 1E-24 172.4 21.4 293 13-346 44-381 (386)
268 PRK06460 hypothetical protein; 99.9 2.7E-20 5.9E-25 173.7 19.7 293 13-346 37-373 (376)
269 PRK08133 O-succinylhomoserine 99.9 1.1E-20 2.4E-25 177.3 17.1 293 13-346 53-389 (390)
270 TIGR02080 O_succ_thio_ly O-suc 99.9 2.5E-20 5.4E-25 174.1 18.9 293 13-346 43-380 (382)
271 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4.3E-20 9.3E-25 172.2 20.4 301 2-342 9-363 (363)
272 PRK07504 O-succinylhomoserine 99.9 1.5E-20 3.2E-25 176.7 17.4 293 13-346 57-394 (398)
273 TIGR01328 met_gam_lyase methio 99.9 2.5E-20 5.4E-25 174.8 18.8 293 13-346 51-389 (391)
274 PRK07050 cystathionine beta-ly 99.9 5.6E-20 1.2E-24 172.4 20.8 296 13-346 57-390 (394)
275 PRK13034 serine hydroxymethylt 99.9 6.4E-19 1.4E-23 166.7 28.1 296 20-349 69-393 (416)
276 PRK07503 methionine gamma-lyas 99.9 1.2E-19 2.5E-24 170.9 22.8 221 13-267 57-282 (403)
277 PRK07810 O-succinylhomoserine 99.8 4.1E-20 8.8E-25 173.8 18.5 221 13-268 62-287 (403)
278 PRK07269 cystathionine gamma-s 99.8 1.1E-19 2.3E-24 168.7 19.4 286 13-346 46-363 (364)
279 PLN02414 glycine dehydrogenase 99.8 5.3E-19 1.1E-23 179.0 25.8 300 19-351 566-910 (993)
280 PRK05968 hypothetical protein; 99.8 1E-19 2.3E-24 170.6 19.1 287 13-346 55-385 (389)
281 TIGR01324 cysta_beta_ly_B cyst 99.8 1.3E-19 2.8E-24 168.7 19.1 294 13-346 42-375 (377)
282 PRK08776 cystathionine gamma-s 99.8 1.3E-19 2.8E-24 170.4 19.1 258 13-307 52-327 (405)
283 PRK14012 cysteine desulfurase; 99.8 1.2E-18 2.7E-23 165.0 25.8 292 21-350 49-381 (404)
284 PRK07811 cystathionine gamma-s 99.8 2.6E-19 5.5E-24 167.9 20.6 294 13-346 53-387 (388)
285 PRK15407 lipopolysaccharide bi 99.8 1.6E-18 3.4E-23 164.5 25.0 294 20-346 62-435 (438)
286 PRK08861 cystathionine gamma-s 99.8 2.7E-19 5.9E-24 166.8 19.0 245 13-292 45-307 (388)
287 PRK08574 cystathionine gamma-s 99.8 1.7E-19 3.7E-24 168.7 17.5 294 13-346 45-383 (385)
288 PRK00011 glyA serine hydroxyme 99.8 2.5E-18 5.5E-23 163.6 25.8 285 29-346 79-388 (416)
289 PRK00451 glycine dehydrogenase 99.8 3.7E-18 7.9E-23 164.0 26.3 281 26-345 117-446 (447)
290 PRK07582 cystathionine gamma-l 99.8 1.1E-18 2.4E-23 162.5 22.0 284 14-342 44-364 (366)
291 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.9E-18 6.2E-23 161.2 24.9 306 2-345 14-380 (380)
292 PRK06084 O-acetylhomoserine am 99.8 5.9E-19 1.3E-23 166.8 20.3 293 13-346 50-421 (425)
293 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 3.4E-19 7.3E-24 168.7 16.1 168 13-213 49-219 (418)
294 PRK09028 cystathionine beta-ly 99.8 6.5E-19 1.4E-23 164.1 17.4 257 15-307 55-328 (394)
295 KOG0633 Histidinol phosphate a 99.8 1.9E-18 4.2E-23 144.4 18.3 272 36-344 86-374 (375)
296 PRK12566 glycine dehydrogenase 99.8 8.7E-18 1.9E-22 167.2 26.2 310 20-361 542-891 (954)
297 PRK08064 cystathionine beta-ly 99.8 1.8E-18 4E-23 162.2 20.4 289 14-344 47-383 (390)
298 TIGR01329 cysta_beta_ly_E cyst 99.8 1.3E-18 2.8E-23 162.7 18.9 289 15-346 41-374 (378)
299 PRK05967 cystathionine beta-ly 99.8 9.8E-19 2.1E-23 162.6 16.8 295 13-346 56-390 (395)
300 PRK06702 O-acetylhomoserine am 99.8 2.4E-18 5.2E-23 161.7 18.4 289 17-346 57-423 (432)
301 COG1003 GcvP Glycine cleavage 99.8 2.5E-17 5.5E-22 147.4 23.5 307 20-362 108-461 (496)
302 PRK08248 O-acetylhomoserine am 99.8 1.8E-18 4E-23 163.6 16.7 166 13-211 56-224 (431)
303 PRK05939 hypothetical protein; 99.8 2.3E-18 4.9E-23 161.5 16.7 166 13-212 39-207 (397)
304 PRK04366 glycine dehydrogenase 99.8 5.1E-17 1.1E-21 156.5 25.8 309 21-363 113-462 (481)
305 PRK06176 cystathionine gamma-s 99.8 3.6E-18 7.7E-23 159.5 16.9 292 13-346 42-377 (380)
306 PRK08134 O-acetylhomoserine am 99.8 5.1E-18 1.1E-22 160.5 18.0 163 13-209 56-222 (433)
307 PTZ00094 serine hydroxymethylt 99.8 2.9E-17 6.3E-22 157.3 22.7 286 28-346 87-407 (452)
308 KOG1358 Serine palmitoyltransf 99.8 4.4E-18 9.4E-23 150.0 15.4 296 16-346 134-464 (467)
309 PLN02509 cystathionine beta-ly 99.8 6.9E-18 1.5E-22 160.0 17.8 290 15-346 127-460 (464)
310 PRK13580 serine hydroxymethylt 99.8 9.9E-17 2.2E-21 150.7 25.3 304 25-349 98-446 (493)
311 PRK07671 cystathionine beta-ly 99.8 5.3E-18 1.1E-22 158.3 16.3 218 14-267 43-265 (377)
312 PRK05367 glycine dehydrogenase 99.8 4.5E-17 9.7E-22 165.8 24.2 303 21-353 542-880 (954)
313 PRK05994 O-acetylhomoserine am 99.8 1.1E-17 2.3E-22 158.7 18.4 293 13-346 55-425 (427)
314 PRK08114 cystathionine beta-ly 99.8 1.6E-17 3.5E-22 154.3 17.2 295 13-346 54-392 (395)
315 PRK02769 histidine decarboxyla 99.8 5E-16 1.1E-20 144.5 27.1 284 23-346 67-371 (380)
316 TIGR00461 gcvP glycine dehydro 99.8 4.8E-16 1E-20 155.8 28.5 310 21-360 530-881 (939)
317 TIGR03235 DNA_S_dndA cysteine 99.8 4.5E-17 9.8E-22 151.7 19.2 259 21-316 42-321 (353)
318 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.4E-17 7.4E-22 151.9 17.9 289 13-346 47-386 (386)
319 KOG2862 Alanine-glyoxylate ami 99.8 3.5E-16 7.5E-21 134.2 22.5 291 22-346 51-381 (385)
320 PRK07812 O-acetylhomoserine am 99.8 3E-17 6.5E-22 155.1 17.3 164 15-211 63-230 (436)
321 COG2873 MET17 O-acetylhomoseri 99.8 4.7E-17 1E-21 143.1 16.4 168 12-212 53-223 (426)
322 KOG1357 Serine palmitoyltransf 99.7 3.6E-17 7.9E-22 146.8 15.9 306 2-346 158-501 (519)
323 PRK03080 phosphoserine aminotr 99.7 1.2E-16 2.5E-21 149.8 19.7 285 20-349 47-374 (378)
324 KOG1549 Cysteine desulfurase N 99.7 6.6E-16 1.4E-20 140.0 22.6 298 23-352 87-422 (428)
325 cd00615 Orn_deC_like Ornithine 99.7 7.5E-17 1.6E-21 146.1 16.1 228 18-266 56-293 (294)
326 KOG2040 Glycine dehydrogenase 99.7 2.9E-16 6.3E-21 146.3 19.0 309 20-361 581-933 (1001)
327 TIGR03531 selenium_SpcS O-phos 99.7 1.1E-15 2.5E-20 143.4 22.4 301 22-344 106-443 (444)
328 PLN03226 serine hydroxymethylt 99.7 6.2E-15 1.3E-19 141.0 27.7 290 20-346 75-418 (475)
329 TIGR01366 serC_3 phosphoserine 99.7 2.5E-16 5.5E-21 146.4 17.3 284 20-346 40-359 (361)
330 TIGR01788 Glu-decarb-GAD gluta 99.7 3.8E-15 8.2E-20 140.5 25.0 307 21-349 80-430 (431)
331 TIGR01364 serC_1 phosphoserine 99.7 1.4E-15 3E-20 140.6 20.1 284 21-346 37-347 (349)
332 PLN03032 serine decarboxylase; 99.7 1.2E-14 2.5E-19 134.4 25.8 275 23-343 68-372 (374)
333 PRK06434 cystathionine gamma-l 99.7 3.9E-16 8.5E-21 145.2 16.1 290 13-346 56-383 (384)
334 PRK05355 3-phosphoserine/phosp 99.7 1E-15 2.3E-20 142.0 18.5 284 21-346 48-357 (360)
335 PRK04311 selenocysteine syntha 99.7 1.9E-14 4.2E-19 136.6 26.3 293 20-346 126-463 (464)
336 PRK05613 O-acetylhomoserine am 99.7 8.1E-16 1.8E-20 145.5 16.8 165 14-211 62-230 (437)
337 COG0626 MetC Cystathionine bet 99.7 1.9E-15 4.2E-20 138.5 18.2 295 12-346 54-393 (396)
338 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.7E-14 5.8E-19 132.5 24.1 328 3-353 51-431 (450)
339 PLN02724 Molybdenum cofactor s 99.7 1.6E-14 3.5E-19 147.1 24.9 307 20-346 77-487 (805)
340 PLN02880 tyrosine decarboxylas 99.7 5.3E-15 1.1E-19 142.1 19.6 307 24-349 125-485 (490)
341 PRK13237 tyrosine phenol-lyase 99.7 7.3E-14 1.6E-18 130.0 25.6 312 18-353 75-438 (460)
342 TIGR00474 selA seryl-tRNA(sec) 99.7 1.3E-13 2.8E-18 130.7 26.7 286 20-341 121-453 (454)
343 PLN02590 probable tyrosine dec 99.6 1.2E-13 2.6E-18 133.0 26.2 309 25-353 174-537 (539)
344 KOG0053 Cystathionine beta-lya 99.6 2.7E-14 5.8E-19 129.4 19.6 199 13-243 69-271 (409)
345 PF12897 Aminotran_MocR: Alani 99.6 6.6E-14 1.4E-18 124.7 20.3 307 18-346 66-414 (425)
346 cd00611 PSAT_like Phosphoserin 99.6 1.9E-14 4.1E-19 133.8 16.6 281 21-345 44-354 (355)
347 PRK15029 arginine decarboxylas 99.6 4.7E-13 1E-17 132.6 27.1 307 20-346 204-603 (755)
348 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3.5E-14 7.5E-19 131.4 17.2 292 19-332 64-416 (417)
349 PLN02263 serine decarboxylase 99.6 2E-12 4.4E-17 121.5 28.5 276 25-346 137-442 (470)
350 cd01494 AAT_I Aspartate aminot 99.6 2.7E-14 5.8E-19 118.3 13.8 157 23-212 2-170 (170)
351 COG1103 Archaea-specific pyrid 99.6 2.2E-12 4.8E-17 109.0 24.6 295 19-346 59-379 (382)
352 PRK13578 ornithine decarboxyla 99.5 5.1E-12 1.1E-16 124.1 25.3 307 20-346 173-564 (720)
353 TIGR03799 NOD_PanD_pyr putativ 99.5 4E-12 8.8E-17 122.6 24.0 283 39-340 162-518 (522)
354 COG0112 GlyA Glycine/serine hy 99.5 1.1E-11 2.3E-16 110.8 23.8 295 21-349 71-391 (413)
355 COG3844 Kynureninase [Amino ac 99.5 1.7E-11 3.7E-16 106.5 23.4 293 22-351 77-405 (407)
356 PRK15400 lysine decarboxylase 99.5 9.1E-12 2E-16 122.3 24.0 303 20-346 194-558 (714)
357 PRK15399 lysine decarboxylase 99.5 1.9E-11 4.1E-16 120.1 25.5 302 20-346 194-558 (713)
358 COG1448 TyrB Aspartate/tyrosin 99.5 5.1E-12 1.1E-16 112.5 18.5 299 17-344 65-395 (396)
359 PLN02271 serine hydroxymethylt 99.5 9.2E-11 2E-15 111.4 26.9 275 40-346 218-539 (586)
360 PLN02452 phosphoserine transam 99.4 1E-11 2.2E-16 115.0 19.7 288 20-346 51-362 (365)
361 TIGR01365 serC_2 phosphoserine 99.4 8.2E-12 1.8E-16 115.6 18.0 298 3-346 22-372 (374)
362 TIGR02617 tnaA_trp_ase tryptop 99.4 1.1E-10 2.4E-15 107.8 24.6 326 3-351 58-444 (467)
363 KOG0258 Alanine aminotransfera 99.4 2.1E-11 4.4E-16 108.3 18.3 298 18-345 114-467 (475)
364 PF00464 SHMT: Serine hydroxym 99.4 4.7E-11 1E-15 110.3 20.7 277 28-340 73-398 (399)
365 PF01212 Beta_elim_lyase: Beta 99.4 5.5E-13 1.2E-17 119.3 7.4 193 3-218 10-214 (290)
366 COG0076 GadB Glutamate decarbo 99.4 3.4E-11 7.4E-16 114.2 19.4 266 25-315 105-402 (460)
367 PLN02414 glycine dehydrogenase 99.4 1.1E-10 2.5E-15 119.0 22.1 275 23-343 150-465 (993)
368 PRK12462 phosphoserine aminotr 99.3 3.8E-10 8.3E-15 103.5 21.5 287 20-346 48-361 (364)
369 PRK05367 glycine dehydrogenase 99.3 7.2E-10 1.6E-14 113.7 21.4 275 23-342 123-437 (954)
370 COG1982 LdcC Arginine/lysine/o 99.2 5.9E-09 1.3E-13 98.9 24.5 296 20-342 69-403 (557)
371 PF00282 Pyridoxal_deC: Pyrido 99.2 1.8E-09 3.8E-14 100.7 17.5 225 26-267 84-353 (373)
372 COG3033 TnaA Tryptophanase [Am 99.1 4.5E-08 9.8E-13 86.5 24.0 321 18-353 76-449 (471)
373 TIGR00461 gcvP glycine dehydro 98.9 1.4E-07 2.9E-12 95.8 21.4 275 23-342 111-426 (939)
374 KOG3846 L-kynurenine hydrolase 98.9 1.4E-07 3E-12 81.8 18.1 287 38-350 130-463 (465)
375 PF03841 SelA: L-seryl-tRNA se 98.9 9.3E-10 2E-14 99.0 4.8 196 23-247 49-261 (367)
376 PF06838 Met_gamma_lyase: Meth 98.9 5.3E-08 1.1E-12 86.9 15.6 185 14-220 46-246 (403)
377 COG1921 SelA Selenocysteine sy 98.9 8.8E-08 1.9E-12 87.1 16.9 195 23-248 70-272 (395)
378 PF05889 SLA_LP_auto_ag: Solub 98.9 2.2E-07 4.8E-12 84.5 17.5 225 114-346 140-389 (389)
379 PF04864 Alliinase_C: Allinase 98.8 5.1E-08 1.1E-12 86.4 12.0 281 21-344 43-362 (363)
380 PF02347 GDC-P: Glycine cleava 98.8 6.7E-07 1.5E-11 83.3 18.7 277 23-341 112-429 (429)
381 KOG1383 Glutamate decarboxylas 98.8 4.5E-07 9.7E-12 83.1 17.0 295 26-354 125-452 (491)
382 KOG0629 Glutamate decarboxylas 98.8 7E-07 1.5E-11 80.9 17.8 303 25-346 145-508 (510)
383 COG0403 GcvP Glycine cleavage 98.7 6.7E-06 1.5E-10 74.9 22.9 284 25-345 124-448 (450)
384 TIGR03811 tyr_de_CO2_Ent tyros 98.7 2.2E-06 4.9E-11 84.0 20.6 234 21-268 123-475 (608)
385 KOG2467 Glycine/serine hydroxy 98.3 0.00012 2.6E-09 65.5 19.1 274 40-346 110-425 (477)
386 KOG1412 Aspartate aminotransfe 98.3 7.3E-05 1.6E-09 65.4 16.2 276 40-349 103-406 (410)
387 COG1932 SerC Phosphoserine ami 98.2 0.00056 1.2E-08 61.6 19.6 170 163-346 171-362 (365)
388 PRK12566 glycine dehydrogenase 98.1 0.00022 4.9E-09 72.6 19.2 272 23-342 126-439 (954)
389 COG4100 Cystathionine beta-lya 98.1 5E-05 1.1E-09 66.1 12.1 181 16-220 59-257 (416)
390 KOG0628 Aromatic-L-amino-acid/ 98.1 0.00074 1.6E-08 62.4 19.8 228 114-349 218-472 (511)
391 KOG1411 Aspartate aminotransfe 97.6 0.0016 3.5E-08 58.1 13.2 152 40-209 124-285 (427)
392 KOG3843 Predicted serine hydro 97.4 0.00039 8.6E-09 59.5 6.5 224 114-346 142-401 (432)
393 PLN02994 1-aminocyclopropane-1 97.3 0.0009 1.9E-08 54.0 6.7 57 16-82 91-153 (153)
394 KOG2040 Glycine dehydrogenase 96.1 1.4 3E-05 43.4 19.3 269 28-342 170-478 (1001)
395 smart00642 Aamy Alpha-amylase 77.6 8.2 0.00018 31.6 6.2 59 114-172 17-93 (166)
396 KOG2790 Phosphoserine aminotra 72.2 29 0.00062 31.0 8.3 135 208-346 214-367 (370)
397 KOG3974 Predicted sugar kinase 70.5 8.4 0.00018 33.6 4.6 49 114-169 91-139 (306)
398 COG2515 Acd 1-aminocyclopropan 68.6 53 0.0011 29.7 9.2 42 129-173 243-284 (323)
399 COG0821 gcpE 1-hydroxy-2-methy 67.9 56 0.0012 29.8 9.3 26 146-171 58-83 (361)
400 PF14116 YyzF: YyzF-like prote 66.6 12 0.00026 23.5 3.6 40 331-371 3-42 (48)
401 PRK13602 putative ribosomal pr 62.1 36 0.00078 24.1 5.9 46 115-170 16-61 (82)
402 PF04413 Glycos_transf_N: 3-De 60.1 58 0.0013 27.1 7.8 104 38-170 22-126 (186)
403 TIGR01305 GMP_reduct_1 guanosi 59.3 1.5E+02 0.0032 27.4 10.7 54 114-170 160-220 (343)
404 COG0296 GlgB 1,4-alpha-glucan 58.2 15 0.00033 36.7 4.5 33 146-178 211-243 (628)
405 PRK13601 putative L7Ae-like ri 56.6 53 0.0011 23.3 5.9 47 116-172 14-60 (82)
406 PF12138 Spherulin4: Spherulat 56.4 36 0.00079 30.0 6.2 52 115-166 18-71 (253)
407 COG0352 ThiE Thiamine monophos 55.4 30 0.00064 29.6 5.3 50 115-170 24-73 (211)
408 COG2870 RfaE ADP-heptose synth 55.2 21 0.00046 33.4 4.6 36 128-169 143-178 (467)
409 PRK11633 cell division protein 55.2 79 0.0017 27.3 7.9 61 286-346 150-215 (226)
410 COG3870 Uncharacterized protei 54.8 72 0.0016 23.4 6.3 45 298-346 12-65 (109)
411 COG1105 FruK Fructose-1-phosph 54.1 38 0.00082 30.8 6.0 25 147-171 144-168 (310)
412 PRK01018 50S ribosomal protein 51.7 54 0.0012 24.2 5.6 42 116-167 22-63 (99)
413 PF10013 DUF2256: Uncharacteri 51.3 10 0.00023 22.8 1.4 15 358-372 4-18 (42)
414 PRK06683 hypothetical protein; 50.9 68 0.0015 22.7 5.8 49 116-174 17-65 (82)
415 COG1435 Tdk Thymidine kinase [ 50.9 1.3E+02 0.0027 25.5 8.1 55 114-174 66-122 (201)
416 PF14149 YhfH: YhfH-like prote 48.8 5.5 0.00012 23.3 -0.1 14 359-372 10-23 (37)
417 TIGR03829 YokU_near_AblA uncha 48.1 9 0.00019 27.5 0.9 14 358-371 31-44 (89)
418 PF00128 Alpha-amylase: Alpha 48.0 16 0.00035 32.7 2.9 26 147-172 50-75 (316)
419 COG0108 RibB 3,4-dihydroxy-2-b 47.4 29 0.00064 29.1 3.9 36 127-167 155-190 (203)
420 PF14787 zf-CCHC_5: GAG-polypr 45.6 9.5 0.00021 22.1 0.5 11 361-371 1-11 (36)
421 PF02686 Glu-tRNAGln: Glu-tRNA 45.5 25 0.00055 23.9 2.9 36 329-365 1-36 (72)
422 PF03652 UPF0081: Uncharacteri 45.1 1.2E+02 0.0026 23.7 7.0 57 114-172 39-98 (135)
423 PRK14810 formamidopyrimidine-D 44.9 34 0.00075 30.5 4.3 20 327-346 191-210 (272)
424 PRK05583 ribosomal protein L7A 44.8 81 0.0018 23.5 5.6 44 115-168 22-65 (104)
425 cd06068 H2MP_like-1 Putative [ 43.9 1.6E+02 0.0035 23.2 9.8 119 23-159 16-138 (144)
426 KOG1465 Translation initiation 43.8 2.5E+02 0.0054 25.4 10.3 109 34-169 160-271 (353)
427 cd04120 Rab12 Rab12 subfamily. 43.0 33 0.00071 29.0 3.8 14 355-368 188-201 (202)
428 PRK07714 hypothetical protein; 42.7 91 0.002 22.9 5.6 44 115-168 23-66 (100)
429 PRK05096 guanosine 5'-monophos 42.5 2.8E+02 0.0061 25.6 10.2 57 114-170 161-221 (346)
430 PTZ00106 60S ribosomal protein 42.2 98 0.0021 23.2 5.7 43 116-168 31-73 (108)
431 TIGR00789 flhB_rel flhB C-term 41.9 24 0.00051 25.1 2.2 22 151-172 29-50 (82)
432 PF07754 DUF1610: Domain of un 41.8 10 0.00022 19.9 0.2 11 360-370 14-24 (24)
433 cd01840 SGNH_hydrolase_yrhL_li 41.8 80 0.0017 25.0 5.7 50 115-168 66-115 (150)
434 TIGR01405 polC_Gram_pos DNA po 41.4 1.5E+02 0.0032 32.8 8.9 20 298-317 642-661 (1213)
435 PF01248 Ribosomal_L7Ae: Ribos 41.1 76 0.0017 22.8 5.0 48 115-172 20-68 (95)
436 PRK13937 phosphoheptose isomer 41.0 2.1E+02 0.0045 23.7 8.6 30 21-50 22-52 (188)
437 cd04920 ACT_AKiii-DAPDC_2 ACT 39.7 60 0.0013 21.4 3.9 46 298-345 16-61 (63)
438 PF13872 AAA_34: P-loop contai 39.4 22 0.00048 32.1 2.2 26 147-172 157-183 (303)
439 PRK07283 hypothetical protein; 38.8 1E+02 0.0022 22.6 5.3 45 115-169 23-67 (98)
440 COG4294 Uve UV damage repair e 38.3 54 0.0012 29.4 4.3 50 115-172 190-240 (347)
441 PF05036 SPOR: Sporulation rel 38.3 53 0.0012 22.1 3.7 45 298-342 17-65 (76)
442 PF02677 DUF208: Uncharacteriz 38.1 63 0.0014 26.7 4.5 47 122-172 18-64 (176)
443 cd04915 ACT_AK-Ectoine_2 ACT d 37.4 95 0.0021 20.7 4.6 46 298-345 17-64 (66)
444 cd01169 HMPP_kinase 4-amino-5- 37.0 1.5E+02 0.0033 25.4 7.2 26 147-172 79-105 (242)
445 PRK09441 cytoplasmic alpha-amy 36.1 39 0.00084 33.0 3.5 26 147-172 79-104 (479)
446 COG1707 ACT domain-containing 36.0 2.4E+02 0.0052 23.0 7.6 49 115-170 126-176 (218)
447 PF13481 AAA_25: AAA domain; P 36.0 68 0.0015 26.4 4.6 52 115-167 129-184 (193)
448 PRK10927 essential cell divisi 35.8 2E+02 0.0043 26.2 7.5 48 297-344 259-307 (319)
449 COG0648 Nfo Endonuclease IV [D 35.4 2E+02 0.0043 25.8 7.5 42 131-172 137-179 (280)
450 PRK08335 translation initiatio 34.8 2.5E+02 0.0054 25.1 8.0 20 148-167 197-216 (275)
451 PRK13600 putative ribosomal pr 34.7 1.1E+02 0.0023 21.9 4.6 51 115-175 18-68 (84)
452 TIGR03831 YgiT_finger YgiT-typ 34.7 19 0.00041 21.8 0.7 18 355-372 25-42 (46)
453 PF07905 PucR: Purine cataboli 34.6 1.2E+02 0.0025 23.2 5.4 47 114-167 57-104 (123)
454 PRK03767 NAD(P)H:quinone oxido 34.1 2E+02 0.0044 24.1 7.2 37 127-167 106-142 (200)
455 TIGR02402 trehalose_TreZ malto 33.5 57 0.0012 32.4 4.2 61 114-174 109-185 (542)
456 COG1088 RfbB dTDP-D-glucose 4, 33.5 3.8E+02 0.0081 24.5 10.4 115 72-198 29-157 (340)
457 PLN03244 alpha-amylase; Provis 33.1 56 0.0012 33.8 4.0 29 147-175 439-467 (872)
458 PF01930 Cas_Cas4: Domain of u 32.5 1.5E+02 0.0032 23.8 6.0 83 281-370 63-156 (162)
459 COG4799 Acetyl-CoA carboxylase 32.4 2.3E+02 0.0049 28.0 7.8 75 129-203 325-413 (526)
460 PRK13945 formamidopyrimidine-D 32.3 89 0.0019 28.1 4.9 20 327-346 201-220 (282)
461 PLN00196 alpha-amylase; Provis 31.8 52 0.0011 31.6 3.5 27 146-172 89-115 (428)
462 COG1066 Sms Predicted ATP-depe 31.4 4.1E+02 0.0089 25.5 9.0 54 113-168 155-216 (456)
463 PRK10886 DnaA initiator-associ 31.3 3.2E+02 0.0069 23.0 8.9 17 151-167 125-141 (196)
464 PF13727 CoA_binding_3: CoA-bi 31.3 1E+02 0.0022 24.6 4.9 44 114-166 129-172 (175)
465 COG4306 Uncharacterized protei 31.2 18 0.0004 27.5 0.3 13 359-371 65-77 (160)
466 PRK00448 polC DNA polymerase I 31.2 2.7E+02 0.0059 31.4 9.1 20 298-317 867-886 (1437)
467 PF06153 DUF970: Protein of un 31.1 63 0.0014 24.3 3.1 45 298-346 12-65 (109)
468 TIGR00506 ribB 3,4-dihydroxy-2 30.5 89 0.0019 26.4 4.3 35 128-167 157-191 (199)
469 PRK12757 cell division protein 30.2 2.6E+02 0.0056 24.7 7.2 47 297-343 196-243 (256)
470 PF14871 GHL6: Hypothetical gl 29.7 1.4E+02 0.003 23.3 5.1 21 147-167 42-62 (132)
471 cd01827 sialate_O-acetylestera 29.5 1.1E+02 0.0025 24.9 4.9 52 115-166 95-152 (188)
472 PF00926 DHBP_synthase: 3,4-di 29.3 79 0.0017 26.6 3.8 35 128-167 152-186 (194)
473 PF13167 GTP-bdg_N: GTP-bindin 29.3 2.3E+02 0.005 20.7 6.9 58 114-172 9-68 (95)
474 TIGR03677 rpl7ae 50S ribosomal 29.1 1.8E+02 0.004 22.1 5.5 49 115-172 31-79 (117)
475 PLN02361 alpha-amylase 29.0 63 0.0014 30.7 3.5 26 147-172 74-99 (401)
476 cd01455 vWA_F11C1-5a_type Von 28.9 1.9E+02 0.0041 24.3 5.9 48 115-166 94-146 (191)
477 PRK14811 formamidopyrimidine-D 28.8 1E+02 0.0022 27.5 4.6 34 304-346 166-199 (269)
478 TIGR00097 HMP-P_kinase phospho 28.8 3.4E+02 0.0073 23.7 8.0 29 142-171 74-103 (254)
479 PRK03512 thiamine-phosphate py 28.7 2E+02 0.0044 24.4 6.3 51 115-171 22-72 (211)
480 PRK12313 glycogen branching en 28.6 60 0.0013 33.0 3.5 27 146-172 217-243 (633)
481 PHA00689 hypothetical protein 28.5 27 0.0006 21.6 0.7 9 363-371 18-26 (62)
482 PF04002 RadC: RadC-like JAB d 28.4 1.1E+02 0.0023 23.5 4.2 47 116-166 55-104 (123)
483 PLN02672 methionine S-methyltr 27.5 4E+02 0.0086 29.1 9.3 50 115-170 516-565 (1082)
484 COG0616 SppA Periplasmic serin 27.5 1.1E+02 0.0023 28.1 4.6 57 114-171 81-139 (317)
485 PF13913 zf-C2HC_2: zinc-finge 27.1 36 0.00078 17.9 0.9 10 362-371 2-11 (25)
486 PRK13938 phosphoheptose isomer 27.1 3.8E+02 0.0082 22.5 9.8 18 149-166 127-144 (196)
487 PRK01103 formamidopyrimidine/5 27.1 1.2E+02 0.0027 27.0 4.9 20 327-346 192-211 (274)
488 COG1377 FlhB Flagellar biosynt 27.0 1.1E+02 0.0024 28.4 4.6 45 127-171 261-318 (363)
489 TIGR00629 uvde UV damage endon 26.8 1.3E+02 0.0028 27.4 5.0 22 151-172 201-222 (312)
490 PRK10785 maltodextrin glucosid 26.6 76 0.0017 32.0 3.9 59 114-172 177-249 (598)
491 TIGR00577 fpg formamidopyrimid 26.5 1.3E+02 0.0027 26.9 4.8 20 327-346 192-211 (272)
492 COG2257 Uncharacterized homolo 26.4 42 0.00091 24.1 1.4 22 151-172 34-55 (92)
493 PF01081 Aldolase: KDPG and KH 26.2 82 0.0018 26.6 3.4 39 114-168 69-107 (196)
494 PRK00014 ribB 3,4-dihydroxy-2- 25.9 1.2E+02 0.0025 26.3 4.3 35 128-167 172-206 (230)
495 PF00150 Cellulase: Cellulase 25.7 71 0.0015 28.1 3.2 57 115-171 23-84 (281)
496 PF05368 NmrA: NmrA-like famil 25.6 3.5E+02 0.0076 22.9 7.5 53 107-167 47-99 (233)
497 cd08071 MPN_DUF2466 Mov34/MPN/ 25.5 2.2E+02 0.0047 21.5 5.3 47 116-166 50-99 (113)
498 PF13407 Peripla_BP_4: Peripla 25.4 1.5E+02 0.0033 25.5 5.2 41 115-167 45-85 (257)
499 cd04937 ACT_AKi-DapG-BS_2 ACT 25.2 1.5E+02 0.0033 19.3 4.0 47 298-346 17-63 (64)
500 TIGR01515 branching_enzym alph 25.2 76 0.0016 32.1 3.5 27 146-172 203-229 (613)
No 1
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-59 Score=420.02 Aligned_cols=335 Identities=45% Similarity=0.723 Sum_probs=318.9
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhcccC-CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
++|+.+|++++++.++.+.++...+|+++|++..+ .++++|+|||+||+|.|++++|.++. ++++.+||.+..+
T Consensus 64 v~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~-----~~~k~~Iia~~ns 138 (404)
T COG4992 64 VEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTG-----DPEKSKIIAFENS 138 (404)
T ss_pred HHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcC-----CCCCcEEEEEcCC
Confidence 47899999999999999999999999999999996 99999999999999999999998763 3456899999999
Q ss_pred CCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 017259 80 FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS 159 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~ 159 (374)
|||.+.++.++++++.++.+|.|+.+++.++||+|+++++++++ ++|++|++||+++.+|.+.+++++++++.++|+
T Consensus 139 FHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd 215 (404)
T COG4992 139 FHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCD 215 (404)
T ss_pred cCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 589999999999999999999999999999999
Q ss_pred hcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 160 KYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 160 ~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
+||+++|.||+|+|+||+|+.|+++++++.||+++++|++|||+ |+|.+++++.+.+.+.+..|++||.+|+++++++.
T Consensus 216 ~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~-PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~ 294 (404)
T COG4992 216 EHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFTPGDHGSTFGGNPLACAVAL 294 (404)
T ss_pred HhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCc-cceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 99999999777888999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCC
Q 017259 240 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDT 319 (374)
Q Consensus 240 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 319 (374)
++++.+.++++.++.++.+++++++|+++...+| ++..+++.|+++++++.... .+.++++.|.++|+++.+.+++
T Consensus 295 a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~-~v~~vRG~GLmiGiel~~~~---~a~~~~~~~~~~gvL~~~a~~~ 370 (404)
T COG4992 295 AVLEVLLEEGLLENVREKGEYLLQRLRELKRRYP-LVKEVRGRGLMIGIELKEPY---RARDIVRALREEGVLVLPAGPN 370 (404)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCC-ceeeeecceeEEEEEecCcc---cHHHHHHHHHHCCeEEecCCCC
Confidence 9999999999999999999999999999998886 89999999999999997653 4789999999999999999999
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 320 IVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 320 ~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+|+.||+.++++++++++++|+++++ ..
T Consensus 371 ViR~~PpL~i~~eei~~~~~~l~~~l~-~~ 399 (404)
T COG4992 371 VIRFLPPLVITEEEIDEALDALERALA-AA 399 (404)
T ss_pred eEEecCCccCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999999999998 54
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-51 Score=376.04 Aligned_cols=337 Identities=42% Similarity=0.712 Sum_probs=299.6
Q ss_pred ChHHHHHHHhccccCcCCCC-CcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSSRAFYN-DKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|+++|++++.|+...+.. +...+++++|.+.. +.+.++|++||++|++.|+++++.++ ++..||.+
T Consensus 78 v~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~T--------gr~~viaf 149 (447)
T COG0160 78 VEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT--------GRPGVIAF 149 (447)
T ss_pred HHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHh--------CCCcEEEE
Confidence 47999999999987776444 89999999999977 35789999999999999999999775 24889999
Q ss_pred ccCCCCcccccccccCCcccc-ccCCCCCCCceeccCCC-----------------HHHHHHHHHh---cCCcEEEEEEc
Q 017259 77 CGCFHGRTLAAISMSCDNEAI-RGFGPLLPGHLKVDFGD-----------------ITALEKIFKE---SGDQIAGFLFE 135 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~---~~~~~~~vi~~ 135 (374)
.++|||.+..+.++++....+ .++.+....+..+|+++ .+.+++.+.+ .+.+++++++|
T Consensus 150 ~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~E 229 (447)
T COG0160 150 DGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIE 229 (447)
T ss_pred CCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEe
Confidence 999999999999998865554 56777767788877752 2335555543 34679999999
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHH
Q 017259 136 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 136 ~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
|+++.+|.+.++++|++++.++|++||+++|+||+|+||||+|+.|+++++++.||++++||++++|+ |+|.++.++++
T Consensus 230 pIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~avv~r~ei 308 (447)
T COG0160 230 PIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSAVVGRAEI 308 (447)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeEEeccHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC-
Q 017259 216 MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA- 294 (374)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 294 (374)
++ ..+..+..||.+|+++++++++.|+.++++++.++.++.+++++++|.++..++| .+.++++.|.|+++++.++.
T Consensus 309 ~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~-~IgdVRG~Glm~giE~v~d~~ 386 (447)
T COG0160 309 MD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGVELVKDRD 386 (447)
T ss_pred cc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcC-ceecccccceEEEEEEecCCC
Confidence 88 7777888999999999999999999999999999999999999999999999986 99999999999999995432
Q ss_pred ----CchhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 ----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 ----~~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.......+++.|+++|+++..++ .+.|||.||++.+++++|++++.|.++++ ++
T Consensus 387 t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~-~~ 446 (447)
T COG0160 387 TKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALK-EA 446 (447)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 13457889999999999998876 89999999999999999999999999997 53
No 3
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1e-50 Score=370.73 Aligned_cols=343 Identities=35% Similarity=0.588 Sum_probs=301.9
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+++|++++.|+.+ ...+.+..+|+++|++... .++++|++|||+|++.|++++++|+ ..+| .+++.++|...
T Consensus 67 ~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~-~~~G-~p~r~~~Isr~ 144 (449)
T COG0161 67 EAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYW-RARG-QPQRKKFISRR 144 (449)
T ss_pred HHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHH-HhcC-CCcceEEEEec
Confidence 789999999998754 3567779999999999984 8899999999999999999999998 7788 45578899999
Q ss_pred cCCCCcccccccccCCcccc-ccCCCCCCCceeccCCC-----------------HHHHHHHHHhcC-CcEEEEEEcccc
Q 017259 78 GCFHGRTLAAISMSCDNEAI-RGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIAGFLFEPIQ 138 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~~~-~~~~~vi~~~~~ 138 (374)
.+|||.+.++.++++..... ..+.+....+.+++.+. .+.||+.|.+++ ++++++|+||+.
T Consensus 145 ~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~ 224 (449)
T COG0161 145 NGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVV 224 (449)
T ss_pred cCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccc
Confidence 99999999999999954444 55655555555544331 567888888876 899999999987
Q ss_pred CC-CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 139 GE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 139 ~~-~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
+. +|+++|++.+++++.++|++|||++|+||+.+||||+|+.|+.+++++.||+++++|+++||++|+|.++.++++.+
T Consensus 225 g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~ 304 (449)
T COG0161 225 GGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYE 304 (449)
T ss_pred cccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHH
Confidence 77 99999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCC-----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc
Q 017259 218 CIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 292 (374)
Q Consensus 218 ~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 292 (374)
.+... .|++||++|+++++++++.|++++++++.++.++...++.+.|+.+.... +.+.++++.|.+..+++..
T Consensus 305 ~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~-p~VgdVR~~Gli~~iElv~ 383 (449)
T COG0161 305 AFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADH-PLVGDVRGLGLIGAIELVA 383 (449)
T ss_pred HHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccC-CcEEEeeccceEEEEEEec
Confidence 88764 68999999999999999999999999999999999999999999854444 4899999999999999955
Q ss_pred CCCc------hhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 293 TALP------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 293 ~~~~------~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+..+ .....+.+.+.++|++++|. ++.+-++||+.+|++|+++++++++++++ ..
T Consensus 384 d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-g~~i~~~PPliit~~eid~l~~~l~~al~-~~ 444 (449)
T COG0161 384 DKATKTPFEARVGARVRAAALERGLLIRPL-GDVIYLMPPLIITREEIDELVDALREALD-ET 444 (449)
T ss_pred ccccccchhhhHHHHHHHHHHHCCeEEeec-CCEEEEcCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 5421 12667888999999999999 67999999999999999999999999998 54
No 4
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=1.4e-50 Score=387.01 Aligned_cols=373 Identities=81% Similarity=1.302 Sum_probs=319.9
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
++|++++++++.+.++.+.++...+++++|+++++.++++|++||++|++.|+++++.+++.++|.+.++.+|+.+.++|
T Consensus 97 ~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~y 176 (474)
T PLN02624 97 IKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCF 176 (474)
T ss_pred HHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCc
Confidence 37889999987776666778899999999999989899999999999999999999987545555444456899999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
||.+..+.++++.+.....|.|..+++..++++|++.+++.++.+++++++|++||+++++|.+.++++++++|.++|++
T Consensus 177 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~ 256 (474)
T PLN02624 177 HGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSK 256 (474)
T ss_pred CCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 99999999998887777778787778888999999999999987667899999999999999999999999999999999
Q ss_pred cCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 161 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
||+++|+||+|+|+++.|..+..+++++.||++++||++++|++|+|+++.+++++..+.+..++.||++++++++++.+
T Consensus 257 ~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~a 336 (474)
T PLN02624 257 HNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMA 336 (474)
T ss_pred cCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHH
Confidence 99999999999999999988887778899999999999998733999999999988888777778899999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-chhHHHHHHHHHHCCeEeccCCCC
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILAKPTHDT 319 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~~ 319 (374)
+++.+.++++.++..++.+++++.|+.+...++..+...++.|.++.+.++.... .....++++.|.++||++.+.+.+
T Consensus 337 aLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~~~ 416 (474)
T PLN02624 337 ALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTHDT 416 (474)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCCCC
Confidence 9999887788899999999999999998776654566678889999988854210 124678999999999999998889
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCCCCCCCCC---CCCCccccccCC
Q 017259 320 IVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAP---ATPCHRCGRNLY 373 (374)
Q Consensus 320 ~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 373 (374)
++||+|++.++++++++++++|+++++..+..+++..+...| +++|.+|||++|
T Consensus 417 ~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (474)
T PLN02624 417 IIRLAPPLSISEDELQECSKALSDVLEHDLPKLQSAKKEKTPKAAPTPCDRCGRNLY 473 (474)
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCCCChhhhhhhhcc
Confidence 999999999999999999999999986334444443333332 669999999998
No 5
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-51 Score=347.99 Aligned_cols=344 Identities=62% Similarity=1.018 Sum_probs=322.7
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
++|+.++++++..++..+++....++++.+.++++++.++.+++|.||++.|++++|..+|..++.|.+..+|+...++|
T Consensus 81 ~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nF 160 (427)
T KOG1402|consen 81 IKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNF 160 (427)
T ss_pred HHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccc
Confidence 36889999998888887889999999999999999999999999999999999999999999999888888999999999
Q ss_pred CCcccccccccCCccccccCCCCCCC-ceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS 159 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~ 159 (374)
||.+.++++++..+.-..+|.|..+. +..+||+|.++|+.+|++ ++++++++||+++..|.++|++.++++..++|+
T Consensus 161 hGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCt 238 (427)
T KOG1402|consen 161 HGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCT 238 (427)
T ss_pred cCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHH
Confidence 99999999999999888888888887 888999999999999996 689999999999999999999999999999999
Q ss_pred hcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 160 KYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 160 ~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
+|++++|.||+|+|++|+|+.++.++..+.||++.++|+++||++|+..++++++++-.+.+..|+.||.+|++++++++
T Consensus 239 kynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vai 318 (427)
T KOG1402|consen 239 KYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAI 318 (427)
T ss_pred hhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-chhHHHHHHHHHHCCeEeccCCC
Q 017259 240 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILAKPTHD 318 (374)
Q Consensus 240 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~ 318 (374)
++|+.+.++++.++....+..++.+|.++...+|.++..++++|.+..+.+..... +.++-++|=.|.++|++..|.++
T Consensus 319 Aalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~ 398 (427)
T KOG1402|consen 319 AALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHG 398 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCCC
Confidence 99999999999999999999999999999988888899999999999998854332 35677888889999999999999
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.||++||+.++++|+++.++++.+.+.
T Consensus 399 ~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 399 NIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988764
No 6
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=6.7e-48 Score=363.21 Aligned_cols=337 Identities=37% Similarity=0.668 Sum_probs=297.2
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
++|+.++++++.+.+..+.++...+++++|++.. +.++++|++|||||++.|+++++.++ .++| +.+|+.+.+
T Consensus 97 ~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t-~~~g----r~~ii~~~~ 171 (442)
T TIGR03372 97 IAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQ-SPRG----KFTFIAASG 171 (442)
T ss_pred HHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHH-hhcC----CcEEEEECC
Confidence 3688999998877666667889999999999987 34789999999999999999998764 2223 478999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+|||.+..+.++++.+.++..+.|..+++..+|++|.+++++.+++ ++++++++++||+++.+|.+.++++++++|.
T Consensus 172 ~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~ 251 (442)
T TIGR03372 172 AFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVR 251 (442)
T ss_pred CccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHH
Confidence 9999999999998877777778887778899999999998888864 4568999999999999999999999999999
Q ss_pred HHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC--CCCCCCCCCCCHH
Q 017259 156 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEHGSTFGGNPL 233 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~ 233 (374)
++|++||+++|+||+++||||+|..|+++++++.||++++||++++|++|+|.+++++++++.+. +..++.||+++++
T Consensus 252 ~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~ 331 (442)
T TIGR03372 252 ALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPL 331 (442)
T ss_pred HHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999449999999999988873 3357889999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 234 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 234 ~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
+++++.++|+.++++++.++.+++++++++.|+++...+|..+.++++.|.++.+++.++. ....+++.|+++||++
T Consensus 332 ~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~---~~~~i~~~l~~~Gvl~ 408 (442)
T TIGR03372 332 ACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE---IGYAFAKELFQQNILV 408 (442)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChH---HHHHHHHHHHHCCcEE
Confidence 9999999999998889999999999999999999987775467888999999999996543 5678999999999999
Q ss_pred ccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 314 KPT--HDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 314 ~~~--~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
.+. ..+.+||.|++.+|++|+++++++|++++
T Consensus 409 ~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 409 AGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred eecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 764 35799999999999999999999998763
No 7
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-47 Score=363.60 Aligned_cols=341 Identities=36% Similarity=0.676 Sum_probs=300.9
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
++|+.++++++.+.+..+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ -.+| +.+|+.+.+
T Consensus 104 ~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t-~~~g----r~~ii~~~~ 178 (459)
T PRK11522 104 VSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQ-SPRG----KFTFIATSG 178 (459)
T ss_pred HHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHh-ccCC----CcEEEEecC
Confidence 3688999998877666677889999999999976 35789999999999999999999764 1222 478999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+|||.+..+.++++.+.++..+.|..+++..+|++|.+++++.+++ ++++++++++||+++.+|.+.+++++++++.
T Consensus 179 ~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr 258 (459)
T PRK11522 179 AFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVR 258 (459)
T ss_pred CCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHH
Confidence 9999999999988887777778887778889999999999998864 3467999999999999999999999999999
Q ss_pred HHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC--CCCCCCCCCCCHH
Q 017259 156 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEHGSTFGGNPL 233 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~ 233 (374)
++|++||+++|+||+++|||++|..|+++++++.||++++||++++|++|+|++++++++++.+. +..++.||+++++
T Consensus 259 ~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~ 338 (459)
T PRK11522 259 KLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPL 338 (459)
T ss_pred HHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHH
Confidence 99999999999999999999999998999999999999999999999449999999999888774 3357889999999
Q ss_pred HHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 234 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 234 ~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
++++++++++.++++++.++++++.+++++.|+++...+|..+.++++.|.++.+++.+.. ....+++.|+++||++
T Consensus 339 ~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~---~~~~i~~~l~~~Gvl~ 415 (459)
T PRK11522 339 ACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE---IGYNFASEMFRQRVLV 415 (459)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch---HHHHHHHHHHHCCeEE
Confidence 9999999999998889999999999999999999887765467889999999999996543 4678999999999999
Q ss_pred ccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 314 KPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 314 ~~~--~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+. ..+.+|+.|++.++++|+++++++|.++++ ++.
T Consensus 416 ~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~-~~~ 453 (459)
T PRK11522 416 AGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA-AMR 453 (459)
T ss_pred EecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHH
Confidence 765 468999999999999999999999999987 553
No 8
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.2e-46 Score=354.58 Aligned_cols=337 Identities=35% Similarity=0.551 Sum_probs=294.4
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+....++++...+|+++|+++.+.++++|++||++|++.|+++++.++.. ++ .+++++|+.++.+||
T Consensus 58 ~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~-~~-~~~r~~ii~~~~~yH 135 (397)
T TIGR03246 58 KALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALD-KH-GADKSEIVAFKNSFH 135 (397)
T ss_pred HHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHh-cC-CCCCCEEEEECCCcC
Confidence 6788888886655555668889999999999888899999999999999999999877422 22 134689999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+..+++.+.+...+.|...++..++++|++++++.+. +++++|++||+++++|.+.++++++++|.++|++|
T Consensus 136 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~ 212 (397)
T TIGR03246 136 GRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH 212 (397)
T ss_pred CccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 999888888877667777777777788899999999999986 57999999999999998888999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|++++|..++...+++.||++++||++++|+ |+|++++++++++.+....++.+|++++++++++.++
T Consensus 213 g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG~-pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~ 291 (397)
T TIGR03246 213 NALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKV 291 (397)
T ss_pred CCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCCc-ceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHH
Confidence 999999999999999999888788899999999999999998 9999999999999988766778999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.++++++.++++++.+++++.|+++...+ +.+..+++.|.++.+.+.+.. ......+++.|+++|+++.+.+.+++
T Consensus 292 l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~-~~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~l~~~Gv~~~~~g~~~l 369 (397)
T TIGR03246 292 LDLVNTPELLAGVKQRHDLFVDGLEKINARY-NVFSEIRGKGLLIGAVLTEAY-QGKAKQFVNAAAEEGVIALIAGPNVV 369 (397)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhcC-CCeEeeecCceEEEEEEcCch-hhHHHHHHHHHHHCCeEEeecCCCEE
Confidence 9998777899999999999999999987655 366678888999988875321 01467899999999999988767899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|++|++.++++++++++++|+++++
T Consensus 370 R~~p~~~~t~~~i~~~~~~l~~~l~ 394 (397)
T TIGR03246 370 RFAPSLVISDDDIDEGLARFERAIE 394 (397)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987
No 9
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-47 Score=359.31 Aligned_cols=344 Identities=28% Similarity=0.451 Sum_probs=290.2
Q ss_pred ChHHHHHHHhccccCc--CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|+.++++++.+..+ .+.++...+|+++|++.. +.++++|++|||+|++.|+++++.|+. .+| .+++.+|+.+
T Consensus 68 ~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~-~~g-~~~r~kii~~ 145 (459)
T PRK05965 68 VEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWN-ATG-RPSKKQFISL 145 (459)
T ss_pred HHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHH-hcC-CCCccEEEEe
Confidence 3688999988776554 356888899999999987 567999999999999999999998752 234 3456899999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccC---------CC--------HHHHHHHHHhcC-CcEEEEEEcccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---------GD--------ITALEKIFKESG-DQIAGFLFEPIQ 138 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d--------~~~le~~l~~~~-~~~~~vi~~~~~ 138 (374)
.++|||.+..+.++++.+.++..+.+....+..+++ +| ++++++.+..++ +++++|++||++
T Consensus 146 ~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiq 225 (459)
T PRK05965 146 ERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQ 225 (459)
T ss_pred cCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccc
Confidence 999999998888887766666555544333333322 23 256788787554 689999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
+.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.
T Consensus 226 g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~ 305 (459)
T PRK05965 226 GSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQG 305 (459)
T ss_pred cCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999995599999999999887
Q ss_pred cCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEec
Q 017259 219 IQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 291 (374)
Q Consensus 219 ~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 291 (374)
+.. ..+++||+++++++++++++++.++++++.++.++..+++.+.|+++. .+ +.+.++++.|.++.+++.
T Consensus 306 ~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~-~~v~~vrG~Gl~~gie~~ 383 (459)
T PRK05965 306 IADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AH-PLVGDVRGRGLLGALELV 383 (459)
T ss_pred HhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cC-CCEEEEeecceEEEEEEe
Confidence 753 247789999999999999999999999999999999999999999875 45 478899999999999984
Q ss_pred cCCC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 292 KTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 292 ~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.. ......+.+.++++|+++.+.+.+.+|+.|+++++++|+++++++|.++++ ++
T Consensus 384 ~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~-~~ 448 (459)
T PRK05965 384 ADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD-DV 448 (459)
T ss_pred ccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 3210 012467888899999999987778899999999999999999999999998 65
No 10
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=353.63 Aligned_cols=334 Identities=40% Similarity=0.663 Sum_probs=292.7
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|++++++++.+.+..+.++...+++++|++..+.+++++++||++|++.|+++++.+. ..+| +.++++|++++++||
T Consensus 54 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~-~~~G-~~~r~~vi~~~~~yh 131 (389)
T PRK01278 54 EALKEQAEKLWHVSNLYRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYH-YGKG-HPERYRIITFEGAFH 131 (389)
T ss_pred HHHHHHHHhcCccccccCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHH-HhcC-CCCCCEEEEECCCcC
Confidence 68888988877666666788899999999998888899999999999999999998764 4455 345579999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+...++.+.+...+.+...++..++++|++++++.++ +++++++++|+++++|...++++++++|.++|++|
T Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~ 208 (389)
T PRK01278 132 GRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDEN 208 (389)
T ss_pred CCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 999999888877766666666556677788889999999986 48999999999998887888999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+++.|..+....+++.||++++||++++|+ |+||+++++++++.+....+..+|++++++++++.++
T Consensus 209 g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 287 (389)
T PRK01278 209 GLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAV 287 (389)
T ss_pred CCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCCc-ceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHH
Confidence 999999999999999888777667788999999999999998 9999999999999888777888999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+.++++.++++++.++++++|+.+...+|.++...++.|.++++.+.. +..++++.|+++||.+.|.+.+++
T Consensus 288 l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~-----~~~~~~~~l~~~GV~~~p~~~~~l 362 (389)
T PRK01278 288 LDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV-----PNRDLVQALRDEGLLTVGAGDNVV 362 (389)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec-----CHHHHHHHHHHCCeEEeecCCCEE
Confidence 999877778899999999999999988665543566778888999987753 467899999999999999878999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
||+|++..+++++++++++|+++++
T Consensus 363 R~~p~~~~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 363 RLLPPLIITEEEIDEALERLERAAE 387 (389)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887
No 11
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=352.40 Aligned_cols=342 Identities=38% Similarity=0.589 Sum_probs=299.7
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|+.++++++.+..+.+.++...+++++|++.. +.++++|++||++|++.|+++++.++ ..+|.++++.+|+.+.++|
T Consensus 63 ~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~-~~~g~~~~r~~ii~~~~~y 141 (408)
T PRK04612 63 AALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWA-SSQGRPADKRVIVTFRGSF 141 (408)
T ss_pred HHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHH-HhhCCCCCCcEEEEECCCc
Confidence 688899988877665566888899999999976 34799999999999999999999875 2345445567899999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
||.+..+.+.++.+.++.++.+...++..++++|++.+++.+. ++++++++++|.++++|.+.++++++++|.++|++
T Consensus 142 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~ 219 (408)
T PRK04612 142 HGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQ 219 (408)
T ss_pred CCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999988888777777777766778889999999999885 35899999999999888888889999999999999
Q ss_pred cCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 161 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
||+++|+||+|+|++++|..+....+++.||+.++||++++|+ |+|++++++++.+.+....+..+|++++++++++.+
T Consensus 220 ~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~-piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a 298 (408)
T PRK04612 220 HDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARV 298 (408)
T ss_pred cCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCC-ceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHH
Confidence 9999999999999999998777666788999999999999998 999999999888888776778899999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCE
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 320 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 320 (374)
+++.++++++.++++++.+++++.|+++...+ +.+.++++.|.++.+++.... .....++.+.|.++|+++.+.+.+.
T Consensus 299 ~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~-~~i~~vrg~Gl~~~i~~~~~~-~~~a~~i~~~l~~~Gvlv~~~g~~~ 376 (408)
T PRK04612 299 ALRKLASPQIAANVARQSAALRAGLEALNAEF-GVFAQVRGRGLMLGAVLAPAH-AGQAGAILDLAAEHGLLLLQAGPDV 376 (408)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CCeeeeeccceEEEEEecCch-hhHHHHHHHHHHHCCeEEeeCCCCE
Confidence 99999888999999999999999999988777 488889999999999985321 0146789999999999999887799
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 321 VRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
+|+.|++..+++|+++++++|+++++ ++.
T Consensus 377 lRl~Ppl~it~eeid~~l~~l~~~l~-~~~ 405 (408)
T PRK04612 377 LRFVPALNLTDAELADGLARLRLALA-DYV 405 (408)
T ss_pred EEEcCCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 99999999999999999999999998 653
No 12
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-46 Score=355.86 Aligned_cols=345 Identities=27% Similarity=0.432 Sum_probs=291.4
Q ss_pred ChHHHHHHHhccccCc--CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|++++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.+. ..+| ..++.+|+.+
T Consensus 72 ~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~-~~~g-~~~r~~Ii~~ 149 (461)
T PRK07482 72 AEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYN-NVLG-RPEKKKIISR 149 (461)
T ss_pred HHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHH-HhcC-CCCCceEEEe
Confidence 3689999999865432 466889999999999977 46899999999999999999998764 2234 3346899999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCC------------------CHHHHHHHHHh-cCCcEEEEEEccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG------------------DITALEKIFKE-SGDQIAGFLFEPI 137 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------d~~~le~~l~~-~~~~~~~vi~~~~ 137 (374)
.++|||.+..+.++++.+.++..+.|....+..++++ +++++++.+.+ .++++++|++||+
T Consensus 150 ~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPv 229 (461)
T PRK07482 150 WRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPV 229 (461)
T ss_pred cCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 9999999999888888776666666655544443322 25677887754 3467999999999
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 138 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 138 ~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
++.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++
T Consensus 230 qg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~ 309 (461)
T PRK07482 230 LGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWD 309 (461)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999659999999999887
Q ss_pred hcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe
Q 017259 218 CIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 290 (374)
Q Consensus 218 ~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 290 (374)
.+.. ..+++||++|+++++++.++++.++++++.++.++..+++.+.|+++...+ +.+.++++.|.++.+++
T Consensus 310 ~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~v~~vrG~Glm~giel 388 (461)
T PRK07482 310 VLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDH-PLVGEVRGVGMLAAVEF 388 (461)
T ss_pred HHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeeceeEEEEEe
Confidence 7652 247789999999999999999999988999999999999999999988777 48889999999999999
Q ss_pred ccCCC-c-------hhHHHHHHHHHHCCeEeccC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 291 DKTAL-P-------VSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 291 ~~~~~-~-------~~~~~~~~~l~~~Gi~v~~~-~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+.. . .....+...|+++|+++.+. .++.+|+.|++.+|++|+++++++|+++++ .+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 455 (461)
T PRK07482 389 VADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD-EV 455 (461)
T ss_pred ccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 53211 0 12467889999999998654 368999999999999999999999999997 54
No 13
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.8e-46 Score=349.23 Aligned_cols=337 Identities=36% Similarity=0.562 Sum_probs=296.7
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCC------ccEEEE
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSID------EAIIVS 75 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~------~~~vi~ 75 (374)
+|++++++++.+....+.++...+++++|++..+.++++|++|||+|++.|+++++.++ .++|.+.+ +.+|+.
T Consensus 38 ~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~-~~~~~~~~~~~~~~r~~ii~ 116 (382)
T PLN00144 38 KAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQ-RVRAPDKKDPAASSATEFVS 116 (382)
T ss_pred HHHHHHHHhcCCccccccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHH-hccCCCCccccccccceEEE
Confidence 68899999887766656688899999999998778899999999999999999998775 22221111 478999
Q ss_pred eccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 76 CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 76 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+.++|||.+..+.++++.+.++..+.|..+++.+++++|++.+++.+.. +++++++++|+++++|...++++++++|.
T Consensus 117 ~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~ 194 (382)
T PLN00144 117 FSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLR 194 (382)
T ss_pred ECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHH
Confidence 9999999999999988877777777777778889999999999988853 57999999999999888888999999999
Q ss_pred HHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHH
Q 017259 156 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLAS 235 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
++|++||+++|+||+|+||++.|.+++.+.+++.||+++|||++++|+ |+|++++++++++.+....+..||+++++++
T Consensus 195 ~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~-pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~ 273 (382)
T PLN00144 195 ALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGL-PIGAVLVTEKVASAINPGDHGSTFAGGPLVC 273 (382)
T ss_pred HHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhccCCCCCCCCCCCCHHHH
Confidence 999999999999999999999998777778899999999999999998 9999999999999998777888999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 236 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 236 ~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
+++.++++.++++++.+++++.++++++.|+++...+| .+..+++.|.++|++++. ....+++.++++||.+.+
T Consensus 274 aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~~~~vrg~G~~~~l~l~~-----~~~~~~~~~~~~Gv~i~~ 347 (382)
T PLN00144 274 NAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNP-HVKEVRGVGLLVGIQLDV-----PAGPLVDACRDSGLLVLT 347 (382)
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCC-CceeeecCceEEEEEecC-----ccHHHHHHHHHCCeEEee
Confidence 99999999998889999999999999999998877664 566778899999999842 457899999999999988
Q ss_pred CC-CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 316 TH-DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 316 ~~-~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.. .+.+|++|++..+++++++++++|.+++. ++
T Consensus 348 ~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~-~~ 381 (382)
T PLN00144 348 AGKGDVVRLVPPLVISEAELEQAVEILADCLP-AL 381 (382)
T ss_pred cCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-hc
Confidence 64 58999999999999999999999999987 53
No 14
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=3.5e-46 Score=354.71 Aligned_cols=344 Identities=30% Similarity=0.511 Sum_probs=289.1
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|+.++++++.+....+.++...+++++|++.. +.++++|++||++|++.|+++++.++ ..+| .+++.+|+.+.++|
T Consensus 70 ~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t-~~~g-~~~r~~ii~~~~~y 147 (451)
T PRK07678 70 EAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYH-AQKG-EPHRYKFISRYRAY 147 (451)
T ss_pred HHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEECCCc
Confidence 688899998877655567888999999999987 34589999999999999999999875 2234 44568999999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceeccCCC-----------------HHHHHHHHH-hcCCcEEEEEEccccCCCC
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFK-ESGDQIAGFLFEPIQGEAG 142 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~-~~~~~~~~vi~~~~~~~~g 142 (374)
||.+..+.++++.+.++..+.|..+++..+++++ ++.+++.++ .+++++++|++||+++.+|
T Consensus 148 HG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG 227 (451)
T PRK07678 148 HGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGG 227 (451)
T ss_pred CCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCC
Confidence 9999999988877666666666555555444321 223566675 3457899999999999999
Q ss_pred cccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC-
Q 017259 143 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP- 221 (374)
Q Consensus 143 ~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~- 221 (374)
.+.++++++++|.++|++||+++|+||+++||||+|..|.++.+++.||+++++|+++||++|+|.+++++++++.+..
T Consensus 228 ~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~ 307 (451)
T PRK07678 228 VLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGK 307 (451)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhcc
Confidence 9999999999999999999999999999999999999888888999999999999999984499999999999888764
Q ss_pred -----CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-
Q 017259 222 -----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 295 (374)
Q Consensus 222 -----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 295 (374)
..++.||++++++++++.++++.++++++.++++++.+++++.|+++...+ +.+.++++.|.++.+++..+..
T Consensus 308 ~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~-~~v~~vrg~Gl~~~i~~~~~~~~ 386 (451)
T PRK07678 308 GEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEH-PLVGDIRGKGLLVGIELVNDKET 386 (451)
T ss_pred CcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEeeceEEEEEEecCCcc
Confidence 247889999999999999999999888999999999999999998877666 4788899999999999843210
Q ss_pred -----chhHHHHHHHHHHCCeEeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 -----PVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 -----~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
......+...|+++|+++.+.+ .+.+|++|++.+|++|+++++++|.++++ ++
T Consensus 387 ~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~-~~ 450 (451)
T PRK07678 387 KEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALE-RI 450 (451)
T ss_pred cCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hc
Confidence 1135678899999999997642 37899999999999999999999999997 54
No 15
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=4.7e-46 Score=351.48 Aligned_cols=342 Identities=32% Similarity=0.504 Sum_probs=296.6
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.+++.++.+....+.++...+++++|++..+.++++|++||++|++.|+++++.++. .++ ..++.+|+.++++||
T Consensus 62 ~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~-~~~-~~~r~~ii~~~~~yH 139 (406)
T PRK12381 62 EALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAH-DRY-GSHKSGIVAFKNAFH 139 (406)
T ss_pred HHHHHHHhhcccccCccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHh-hcC-CCCCCeEEEECCCcC
Confidence 688888888766555566888999999999988889999999999999999999987642 222 124589999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+..+++.+.++..+.+...++..++++|++++++.+. ++++++++||+++.+|.+.++++++++|.++|++|
T Consensus 140 G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~ 216 (406)
T PRK12381 140 GRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRH 216 (406)
T ss_pred CcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc
Confidence 999988888887777777777777788889999999999886 57999999999988898888999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+++.|..++...+++.||++++||++++|+ |+|++++++++++.+....+..+|++++++++++.++
T Consensus 217 ~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~-~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~ 295 (406)
T PRK12381 217 NALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKV 295 (406)
T ss_pred CCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCCC-ceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999998777777888999999999999998 9999999999999998777788999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+.++++.++++++.+++.+.|+++...++ .+..+++.|.++++.+++.. ......+.+.|.++||++.+.+.+.+
T Consensus 296 l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~vrg~Gl~~~~~l~~~~-~~~~~~~~~~l~~~Gv~v~~~g~~~l 373 (406)
T PRK12381 296 LELINTPEMLNGVKQRHDWFVERLNTINARYG-LFSEIRGLGLLIGCVLNAEY-AGKAKQISQEAAKAGVMVLIAGPNVV 373 (406)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEEecCeEEEEEEecCch-hhHHHHHHHHHHHCCcEEeeCCCCEE
Confidence 99987778999999999999999998865553 56677888999999886421 01467899999999999988767899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHhccCCcC
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLELDLPKM 352 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~~~~~~~ 352 (374)
|++|++.++++++++++++|+++++ ++.+.
T Consensus 374 Rl~p~~~~t~~~i~~~~~~l~~~l~-~~~~~ 403 (406)
T PRK12381 374 RFAPALNISEEEITTGLDRFARACE-RFVSR 403 (406)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHHH-HHHhc
Confidence 9999999999999999999999998 66443
No 16
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.8e-46 Score=353.25 Aligned_cols=342 Identities=27% Similarity=0.428 Sum_probs=291.9
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .+.++...+++++|++..+ .++++|++|||+|++.|+++++.++ ..+| ..++.+|+.+..
T Consensus 77 ~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~-~~rg-~~~r~~Ii~~~~ 154 (453)
T PRK06943 77 AALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAW-RNRG-RGDKREFVCLAN 154 (453)
T ss_pred HHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHH-HHhC-CCCCCEEEEECC
Confidence 688899998876554 4668889999999999874 4699999999999999999998764 2234 234689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCC-----------------CHHHHHHHHHhcCCcEEEEEEcc-ccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESGDQIAGFLFEP-IQGE 140 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~l~~~~~~~~~vi~~~-~~~~ 140 (374)
+|||.+.++.++++...++..|.|...++..++++ +++++++.+.++++++++|++|| +++.
T Consensus 155 ~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~ 234 (453)
T PRK06943 155 GYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCA 234 (453)
T ss_pred CcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccc
Confidence 99999999999998877777777765555544433 24778888877778999999999 5999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC
Q 017259 141 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 220 (374)
Q Consensus 141 ~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~ 220 (374)
+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.+.
T Consensus 235 gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~ 314 (453)
T PRK06943 235 AGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFY 314 (453)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999559999999999988775
Q ss_pred C------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 221 P------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 221 ~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
. ..+++||++++++++++.++|+.++++++.++.++..+++.+.|+++.. .| .+.++++.|.++.+++..+.
T Consensus 315 ~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~-~~-~v~~vrG~Gl~~gvel~~~~ 392 (453)
T PRK06943 315 DDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAA-HP-QVRHLRQRGTIFAFDVALDG 392 (453)
T ss_pred ccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CC-CEEeEeccccEEEEEEccCC
Confidence 3 2377899999999999999999999889999999999999999999854 54 67789999999999985321
Q ss_pred C--chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 L--PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 ~--~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. ......+.+.++++|+++.+.+ +.+|++|++.+|++|+++++++|+++++ ++
T Consensus 393 ~~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (453)
T PRK06943 393 DAARTFSRRFFEAALERELLLRPIG-TTVYLMPPYVLDDDEIAWLAERTRATLD-AT 447 (453)
T ss_pred CcchHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 0 1125678899999999998874 5799999999999999999999999998 54
No 17
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.7e-46 Score=352.04 Aligned_cols=340 Identities=27% Similarity=0.430 Sum_probs=289.0
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC-------CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEE
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG-------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAII 73 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-------~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~v 73 (374)
+|+.++++++.+... .+.++...+++++|.+... .++++|++|||+|++.|+++++.++ ..+| ..++.+|
T Consensus 87 ~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~-~~~g-~~~r~~i 164 (472)
T PRK08742 87 AAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYF-HNRG-EHRRTRF 164 (472)
T ss_pred HHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHH-HhcC-CCCCcEE
Confidence 688889888766544 3668889999999999763 4699999999999999999999875 2234 3456899
Q ss_pred EEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC-----------------HHHHHHHHHhcCCcEEEEEEcc
Q 017259 74 VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGFLFEP 136 (374)
Q Consensus 74 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~~~~~~~~vi~~~ 136 (374)
+.+.++|||.+..+.++++.+.++..+.|...++.++++++ ++.+++.+..+++++++|++||
T Consensus 165 i~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EP 244 (472)
T PRK08742 165 IALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEP 244 (472)
T ss_pred EEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEcc
Confidence 99999999999999999887777777777666665555532 4667777776667899999999
Q ss_pred -ccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHH
Q 017259 137 -IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 137 -~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
+++.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++
T Consensus 245 viqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei 324 (472)
T PRK08742 245 RLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQL 324 (472)
T ss_pred ccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999996599999999999
Q ss_pred HhhcCC------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEE
Q 017259 216 MLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 289 (374)
Q Consensus 216 ~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~ 289 (374)
++.+.. ..++.||++++++++++.++++.++++++.++.++..+++++.++.+ .++ +.+.++++.|.++.++
T Consensus 325 ~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~-~~i~dvRG~Gl~~gie 402 (472)
T PRK08742 325 YDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEH-PHVADVRQAGMVVAFE 402 (472)
T ss_pred HHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcC-CCeeeEeccceEEEEE
Confidence 887642 24678999999999999999999999999999999999999877765 445 4788999999999999
Q ss_pred eccCCC-c-------hhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 290 FDKTAL-P-------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 290 ~~~~~~-~-------~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+..+.. . .....+.+.++++|+++.+. ++.|||.|++..|++|+++++++|+++++
T Consensus 403 l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-g~vi~~~PpL~it~~ei~~~~~~l~~~l~ 466 (472)
T PRK08742 403 LTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL-GDVLYWMPPYCVDEAQLALLADTTRHAID 466 (472)
T ss_pred eccCccccccCCchhHHHHHHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 853211 0 01356888899999999887 47999999999999999999999999998
No 18
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-45 Score=351.53 Aligned_cols=342 Identities=28% Similarity=0.467 Sum_probs=292.3
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+..+ .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ..+| ..++.+|+.+.+
T Consensus 70 ~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~-~~~g-~t~r~~ii~~~~ 147 (466)
T PRK07030 70 QRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYW-RNRG-KPRKKRFVTLTN 147 (466)
T ss_pred HHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH-HHhC-CCCCcEEEEECC
Confidence 688899998776554 466888999999999976 46799999999999999999998764 2234 234588999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCC-----------------HHHHHHHHHhcCCcEEEEEEcc-ccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGFLFEP-IQGE 140 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~~~~~~~~vi~~~-~~~~ 140 (374)
+|||.+..+.++++.+.++..+.|...++..+|+++ ++++++.+.+++++++++++|| +++.
T Consensus 148 ~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~ 227 (466)
T PRK07030 148 SYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGA 227 (466)
T ss_pred CcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccC
Confidence 999999999988887766666666655555555432 5667888877778999999999 7999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC
Q 017259 141 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 220 (374)
Q Consensus 141 ~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~ 220 (374)
+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.+.
T Consensus 228 gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~ 307 (466)
T PRK07030 228 GGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFY 307 (466)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999559999999999988774
Q ss_pred C-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 221 P-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 221 ~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
. ..++.||++++++++++.++|+.++++++.++.++..+++++.|+++. .+ +.+.++++.|.++.+++..+
T Consensus 308 ~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~-~~v~~vrG~Gl~~gie~~~~ 385 (466)
T PRK07030 308 DDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DH-PHVAEVRQTGMILAIEMVQD 385 (466)
T ss_pred cccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cC-CCEEEeEeceeEEEEEeccC
Confidence 2 247889999999999999999999999999999999999999999885 45 47888999999999998432
Q ss_pred CCc--------hhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 294 ALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 294 ~~~--------~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
... .....+.+.|+++|+++.+. ++.+|+.|++.+|++|+++++++|.++++ ++
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-g~~i~~~Ppl~it~~eid~~~~~l~~al~-~~ 447 (466)
T PRK07030 386 KASKTPYPWQERRGLKVYQHALERGALLRPL-GSVVYFLPPYVITPEQIDFLAEVASEGID-IA 447 (466)
T ss_pred ccccccCcchhHHHHHHHHHHHHCCeEEEec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-HH
Confidence 210 01346888999999999886 46999999999999999999999999999 76
No 19
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-45 Score=349.23 Aligned_cols=343 Identities=31% Similarity=0.528 Sum_probs=288.4
Q ss_pred hHHHHHHHhccccCc--CCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|++++++++.+.+. .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ...| .+++.+|+.+
T Consensus 65 ~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~-~~~g-~~~r~~ii~~ 142 (449)
T PRK07481 65 EAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYW-KVRG-QPERTKFISL 142 (449)
T ss_pred HHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEE
Confidence 688899998876543 356888999999999987 35789999999999999999999875 2234 3456899999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceecc--------CC--CHHHH--------HHHHH-hcCCcEEEEEEccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FG--DITAL--------EKIFK-ESGDQIAGFLFEPI 137 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--d~~~l--------e~~l~-~~~~~~~~vi~~~~ 137 (374)
+++|||.+..+.++++.+.++..+.|..+++..++ ++ |++.+ |+.+. .+++++++|++||+
T Consensus 143 ~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPv 222 (449)
T PRK07481 143 KQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPV 222 (449)
T ss_pred CCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 99999999998888877666665666555554443 33 44443 44444 34578999999999
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 138 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 138 ~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
++.+|.+.++++++++|.++|++||+++|+||+++||||+|..++++.+++.||+++++|+++||++|+|.+++++++++
T Consensus 223 qg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~ 302 (449)
T PRK07481 223 QGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIAD 302 (449)
T ss_pred cCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999559999999999988
Q ss_pred hcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe
Q 017259 218 CIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 290 (374)
Q Consensus 218 ~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 290 (374)
.+.. ..+++||++++++++++.++++.++++++.+++++..+++++.|+++...+ +.+.++++.|.++.+++
T Consensus 303 ~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrG~Glm~gi~l 381 (449)
T PRK07481 303 AFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERF-ELVGDVRGKGLMLALDL 381 (449)
T ss_pred HHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEeecceEEEEEe
Confidence 8753 247789999999999999999999888999999999999999999988766 48889999999999998
Q ss_pred ccCCC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 291 DKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 291 ~~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+.. ......+.+.|+++|+++.+.+ +.+|++|++++|++|+++++++|.++++ ++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~ 446 (449)
T PRK07481 382 VADKATREPIDPSKGYANAVADVARENGVLVRPSG-TKIILSPPLVIQREDVDRIVDALDAGLS-AV 446 (449)
T ss_pred cccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-hc
Confidence 43210 1134578888999999998874 5699999999999999999999999998 54
No 20
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.3e-45 Score=347.90 Aligned_cols=332 Identities=53% Similarity=0.914 Sum_probs=288.4
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+.+....++...+++++|+++.+.+++++++||++|++.|+++++.+++...|.+.++++|+.+..+||
T Consensus 63 ~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~H 142 (396)
T PRK04073 63 QALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFH 142 (396)
T ss_pred HHHHHHHhhccccccccCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcC
Confidence 68888998877765556678899999999998888999999999999999999998764333343345689999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+..+++.+.+...+.+..+++..++++|++++++.+. +++++++++|++|++|.+.++++++++|.++|++|
T Consensus 143 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~ 219 (396)
T PRK04073 143 GRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE 219 (396)
T ss_pred CCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 999988888877767777777777788889999999999886 57999999999999999998889999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCC-ccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
|+++|+||+|+|+++.|..++.+..++.||++++||++++| + |+|++++++++++.+....+..+|++++++++++.+
T Consensus 220 g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~a 298 (396)
T PRK04073 220 NVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVF-PISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIA 298 (396)
T ss_pred CCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999988777767778899999999999975 7 999999999999998776677899999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCE
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 320 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 320 (374)
+|+.++++++.++.+++++++.+.|+++. . +.+...++.|.++++.++. ...++++.|+++||++.+...++
T Consensus 299 aL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~-~~i~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gv~~~~~~~~~ 370 (396)
T PRK04073 299 ALEVLEEEKLPERSLELGEYFKEQLKEID--N-PMIKEVRGRGLFIGVELNE-----PARPYCEALKEEGLLCKETHETV 370 (396)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhhc--C-CcccceecceEEEEEEecc-----hHHHHHHHHHHCCeEEecCCCCE
Confidence 99988777888999999999999998863 2 2445667789998888753 46789999999999998876789
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+||+|++..+++++++++++|++++
T Consensus 371 iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 371 IRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEECCcccCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998875
No 21
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-45 Score=348.77 Aligned_cols=344 Identities=32% Similarity=0.508 Sum_probs=289.4
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.+. ..+| .+++.+|+.+..
T Consensus 53 ~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~-~~~g-~~~r~~Ii~~~~ 130 (443)
T PRK07483 53 AAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYF-VEIG-QPQRRHFIARRQ 130 (443)
T ss_pred HHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEECC
Confidence 688899988765443 356888899999999976 46899999999999999999999774 2334 345689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccC----CC--------------HHHHHHHHHh-cCCcEEEEEEccccC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GD--------------ITALEKIFKE-SGDQIAGFLFEPIQG 139 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d--------------~~~le~~l~~-~~~~~~~vi~~~~~~ 139 (374)
+|||.+..+.++++.+.++..+.|...++..+++ ++ ++++++.+.. +++++++|++||+++
T Consensus 131 ~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg 210 (443)
T PRK07483 131 SYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVG 210 (443)
T ss_pred CcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCccc
Confidence 9999999999988877666666665555554432 22 2567766653 446899999999998
Q ss_pred -CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 140 -EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 140 -~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.
T Consensus 211 ~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~ 290 (443)
T PRK07483 211 ATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDA 290 (443)
T ss_pred CcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHH
Confidence 4788999999999999999999999999999999999999999999999999999999999996599999999999888
Q ss_pred cCCC----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 219 IQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 219 ~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
+... .+++||++++++++++.+.++.++++++.++.++..+++++.|+++..++| .+.++++.|.++.+++.++.
T Consensus 291 ~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vRG~Glm~gie~~~~~ 369 (443)
T PRK07483 291 IADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHP-HVGDIRGRGLFVGVELVADR 369 (443)
T ss_pred HhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeecccEEEEEEeecc
Confidence 7542 477899999999999999999999999999999999999999998877764 78899999999999984321
Q ss_pred C--------chhHHHHHHHHHHCCeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 L--------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 ~--------~~~~~~~~~~l~~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. ......+.+.++++|+++.+.+ ++.+|+.|+++.+++|+++++++|+++++ ++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~-~~ 438 (443)
T PRK07483 370 ATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAID-AA 438 (443)
T ss_pred cccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 0 0124678899999999997652 47999999999999999999999999998 54
No 22
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=4.1e-45 Score=349.76 Aligned_cols=343 Identities=27% Similarity=0.414 Sum_probs=283.4
Q ss_pred ChHHHHHHHhccccCc--CCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEE
Q 017259 1 MKALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS 75 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~ 75 (374)
++|+.++++++.+..+ .++++...+++++|.+.+ +.++++|++||++|++.|+++++.+. ...| .+++.+||.
T Consensus 111 ~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~-~~~g-~~~r~~iI~ 188 (504)
T PLN02760 111 VAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYN-NALG-RPNKKKFIA 188 (504)
T ss_pred HHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHH-HhcC-CCCCcEEEE
Confidence 3688999988766543 356888999999999975 24689999999999999999998764 2234 234689999
Q ss_pred eccCCCCcccccccccCCccccccCCCCCCCceeccCC----------C--------HHHHHHHHHh-cCCcEEEEEEcc
Q 017259 76 CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG----------D--------ITALEKIFKE-SGDQIAGFLFEP 136 (374)
Q Consensus 76 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------d--------~~~le~~l~~-~~~~~~~vi~~~ 136 (374)
++.+|||.+..+..+++.+.++..+.+....+..++++ + .+++++.+.+ .++++++|++||
T Consensus 189 ~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EP 268 (504)
T PLN02760 189 RSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEP 268 (504)
T ss_pred ECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECC
Confidence 99999999988888877665544444332333333221 1 2457777753 346799999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHH
Q 017259 137 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM 216 (374)
Q Consensus 137 ~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~ 216 (374)
+++.+|.+.++++++++|.++|++||+++|+||+++||||+|..++++++++.||+++++|+++||++|+|.++++++++
T Consensus 269 v~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~ 348 (504)
T PLN02760 269 VMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEIS 348 (504)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999866999999999998
Q ss_pred hhcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEE
Q 017259 217 LCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 289 (374)
Q Consensus 217 ~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~ 289 (374)
+.+.. ..+++||+++++++++++++|+.++++++.++++++.+++++.|+++ ... +++.++++.|.++.++
T Consensus 349 d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~Gl~~gie 426 (504)
T PLN02760 349 DVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGS-PIIGEIRGTGLILGTE 426 (504)
T ss_pred hhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcC-CCeeeEEeCceEEEEE
Confidence 88753 24788999999999999999999998899999999999999999998 555 4888899999999998
Q ss_pred eccCCC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 290 FDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 290 ~~~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+.++.. ......+.+.|+++||++.+.+ +.+|++|++.+|++|+++++++|+++++ .+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lrl~Ppl~it~eeid~~~~~l~~al~-~~ 492 (504)
T PLN02760 427 FVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIMMSPPLIITPEEVDELISIYGKALK-AT 492 (504)
T ss_pred EecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 854321 0125568889999999998764 6899999999999999999999999987 55
No 23
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-45 Score=342.60 Aligned_cols=337 Identities=34% Similarity=0.613 Sum_probs=288.7
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+... .++++...+++++|++... .++++|++|||+|++.|+++++.+. | +.+|+.+.
T Consensus 63 ~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~ 134 (425)
T PRK07495 63 AAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAAT----G----RSAVIAFG 134 (425)
T ss_pred HHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEEC
Confidence 688999998776543 4668889999999999873 2689999999999999999998652 3 47899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCCC----------HHHHHHHHHh--cCCcEEEEEEccccCCCCcc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVI 144 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~l~~--~~~~~~~vi~~~~~~~~g~~ 144 (374)
++|||.+..+..+++. ..+..++.|...++..+++++ ++.+++.+++ .++++++++++|+++++|.+
T Consensus 135 ~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~ 214 (425)
T PRK07495 135 GGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFY 214 (425)
T ss_pred CCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCc
Confidence 9999999888777664 346666777666777777764 4556777753 34679999999999998888
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 224 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~ 224 (374)
.++++++++|.++|++||+++|+||+|+||+++|..++++.+++.||++++||++++|+ |+|++++++++++.+....+
T Consensus 215 ~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~~~~~~~~~ 293 (425)
T PRK07495 215 PAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPGPGGL 293 (425)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHHhccCCCCc
Confidence 88999999999999999999999999999999998888888899999999999999998 99999999999998887778
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----chhHH
Q 017259 225 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAY 300 (374)
Q Consensus 225 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~ 300 (374)
..||++++++++++.++++.++++++.+++++++++++++|+++...+| .+.++++.|.++++++.+... .....
T Consensus 294 ~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~ 372 (425)
T PRK07495 294 GGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVP-EIADIRGPGFMNAVEFNDADSGLPSAEFAN 372 (425)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeecCceEEEEEEecCCCCCccHHHHH
Confidence 8899999999999999999998889999999999999999999887774 777888999999999854211 11255
Q ss_pred HHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 301 DICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.+.|+++|+++.+.+ ++.+|+.|+++.|++++++++++|+++++ .+
T Consensus 373 ~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~-~~ 422 (425)
T PRK07495 373 RVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASIL-EA 422 (425)
T ss_pred HHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HH
Confidence 78888999999997643 58999999999999999999999999998 65
No 24
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=5.4e-45 Score=346.22 Aligned_cols=337 Identities=30% Similarity=0.506 Sum_probs=283.8
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
++|+.++++++.+..+.+.++...+++++|++.. +.++++|++|||+|++.|+++++.+. | +.+|+.+.+
T Consensus 75 ~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t----g----r~~ii~~~~ 146 (451)
T PRK06062 75 VAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHT----G----RPKVLSAYR 146 (451)
T ss_pred HHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhh----C----CceEEEEeC
Confidence 3688999999888766777899999999999987 36899999999999999999998753 2 488999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceec--------cC---CC-------HHHHHHHHHhc-CCcEEEEEEccccC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------DF---GD-------ITALEKIFKES-GDQIAGFLFEPIQG 139 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---~d-------~~~le~~l~~~-~~~~~~vi~~~~~~ 139 (374)
+|||.+..+.++++.+..... .|...++..+ ++ +| ++++++.++.+ ++++++|++||+++
T Consensus 147 ~yHG~t~~als~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g 225 (451)
T PRK06062 147 SYHGGTGSAINLTGDPRRWPN-DTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPG 225 (451)
T ss_pred CCCCCCHHHHhhcCCcccccC-CCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccC
Confidence 999999999888765433221 2222222222 12 22 67788888654 36799999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
++|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|++++|++|+|.+++++++++.+
T Consensus 226 ~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~ 305 (451)
T PRK06062 226 TAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATF 305 (451)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999966999999999999888
Q ss_pred CCC--CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHH-HHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-
Q 017259 220 QPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG-EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 295 (374)
Q Consensus 220 ~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 295 (374)
... .+++||+++++++++++++|+.++++++.++.++.+ +++++.|+++...+| .+.++++.|.++.+++..+..
T Consensus 306 ~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gve~~~~~~~ 384 (451)
T PRK06062 306 ADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHP-SVGEVRGLGVFWALELVADRET 384 (451)
T ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC-cEEeEeccccEEEEEEcccccc
Confidence 643 467799999999999999999998889999999998 699999999877764 778899999999999843210
Q ss_pred -----c-----hhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 -----P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 -----~-----~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. .....+.+.|+++||++.+. .+.+|++|++.+|++|+++++++|+++++ .+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lrl~ppl~~t~~eid~~~~~l~~~l~-~~ 446 (451)
T PRK06062 385 REPLAPYGASSAAMAAVKAACKERGLLPFVN-GNRIHVVPPCTVTEDEVREGLAILDAALA-VA 446 (451)
T ss_pred cCCCcccchhhHHHHHHHHHHHHCCcEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-Hh
Confidence 0 12457889999999998875 57899999999999999999999999998 54
No 25
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4e-45 Score=347.96 Aligned_cols=342 Identities=31% Similarity=0.542 Sum_probs=291.5
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ..+| ..++.+|+.+++
T Consensus 79 ~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~-~~~g-~tgr~~ii~~~~ 156 (460)
T PRK06916 79 EAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYW-QNKG-KPKKQRFVTLKN 156 (460)
T ss_pred HHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEECC
Confidence 688999998776554 356888899999999987 35799999999999999999999764 2233 345689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCC-----------------CHHHHHHHHHhcCCcEEEEEEcc-ccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESGDQIAGFLFEP-IQGE 140 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~l~~~~~~~~~vi~~~-~~~~ 140 (374)
+|||.+..+.++++...++..+.|...++..+|++ +++.+++.+++++++++++++|| +++.
T Consensus 157 ~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~ 236 (460)
T PRK06916 157 AYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGA 236 (460)
T ss_pred cCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCC
Confidence 99999999999888777777777665555555432 24567788877778999999999 6999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC
Q 017259 141 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 220 (374)
Q Consensus 141 ~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~ 220 (374)
+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.+.
T Consensus 237 gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~ 316 (460)
T PRK06916 237 GGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFY 316 (460)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999559999999999988764
Q ss_pred C-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 221 P-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 221 ~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
. ..++.||++++++++++.++++.++++++.++++++.+++++.|+++.. + +.+.++++.|.++.+++.++
T Consensus 317 ~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~-~~v~~vrG~Glm~giel~~~ 394 (460)
T PRK06916 317 GDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-L-KHVGDIRQLGLMVGIELVKN 394 (460)
T ss_pred ccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEeecCCceeeEEeecc
Confidence 2 2467799999999999999999998889999999999999999999864 5 47888999999999988532
Q ss_pred CC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 294 AL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 294 ~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.. ......+...|+++|+++.+. ++.+|+.|+++++++|+++++++|+++++ ++
T Consensus 395 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-g~~l~~~Ppl~it~~~id~~~~~l~~~l~-~~ 456 (460)
T PRK06916 395 KETKEPFEWTERVGVQVCKRSRELGMLTRPL-GNTIVFMPPLASTIDELDEMLRILYKAIS-DV 456 (460)
T ss_pred cccccCCCchhhHHHHHHHHHHHCCeEEEec-CCEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 11 001357889999999999886 47999999999999999999999999998 65
No 26
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4e-45 Score=344.65 Aligned_cols=337 Identities=28% Similarity=0.473 Sum_probs=285.9
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+..+ .+.++...+|+++|++.. +.++++|++||++|++.|+++++.++ ..+| .+++.+|+.+.+
T Consensus 67 ~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~-~~~g-~~~r~~ii~~~~ 144 (429)
T PRK06173 67 AAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQ-QAKG-EVQRTKFATIRS 144 (429)
T ss_pred HHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHH-HHhC-CCCCcEEEEECC
Confidence 688899998877554 356888999999999987 46899999999999999999999774 3334 345689999999
Q ss_pred CCCCcccccccccCC-ccccccCCCCCCCceeccCC-----------CHHHHHHHHHhcCCcEEEEEEccc-cCCCCccc
Q 017259 79 CFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPI-QGEAGVII 145 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~l~~~~~~~~~vi~~~~-~~~~g~~~ 145 (374)
+|||.+..+.++++. +.++..+.+....+..++++ +++.+++.+..++++++++++||+ ++.+|.+.
T Consensus 145 ~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~ 224 (429)
T PRK06173 145 GYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYF 224 (429)
T ss_pred CcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCccc
Confidence 999998888877653 33555555544444444432 366678888766678999999996 99999999
Q ss_pred CChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC----
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---- 221 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---- 221 (374)
++++++++|.++|++||+++|+||+|+|+|++|..|+++++++.||++++||+++||+++++.++.++++++.+.+
T Consensus 225 ~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~ 304 (429)
T PRK06173 225 YSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAK 304 (429)
T ss_pred CCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999988888999999999999999996699999999998887753
Q ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHH
Q 017259 222 -GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY 300 (374)
Q Consensus 222 -~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 300 (374)
..++.||.++++++++++++++.++++++.++++++.+++++.|+++. .+ +.+..+++.|.++.+++.+.. ...
T Consensus 305 ~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~-~~-~~v~~vRg~Gl~~~iel~~~~---~~~ 379 (429)
T PRK06173 305 CFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAA-EF-DSVAEVRVLGAIGVVEMKEPV---NMA 379 (429)
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cC-CCeeeeeccceEEEEEeCCcc---cHH
Confidence 246678999999999999999999888899999999999999998763 34 366778899999999996543 467
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.|+++||++.+.+ +.+|+.||++.+++|+++++++|++++.
T Consensus 380 ~i~~~l~e~Gi~v~~~g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~ 424 (429)
T PRK06173 380 TLQPRFVEHGIWVRPFG-KLVYIMPPFIISPDELSQLTSGLLRVLK 424 (429)
T ss_pred HHHHHHHHCCeEEEecC-CEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 89999999999998874 6999999999999999999999999997
No 27
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=7.4e-45 Score=342.36 Aligned_cols=337 Identities=30% Similarity=0.459 Sum_probs=286.0
Q ss_pred ChHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 1 MKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
++|++++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ..+| .++.+|+.+.
T Consensus 65 ~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~-~~~g--~~r~kii~~~ 141 (428)
T PRK07986 65 NAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYW-QAKG--EPRQRFLTLR 141 (428)
T ss_pred HHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH-HhcC--CCCcEEEEEC
Confidence 3688899998776554 356888999999999987 35799999999999999999998764 2222 2358899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceecc-----------CCCHHHHHHHHHhcCCcEEEEEEccc-cCCCCcc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI-QGEAGVI 144 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~d~~~le~~l~~~~~~~~~vi~~~~-~~~~g~~ 144 (374)
++|||.+..+.++++. ..+...+.+..+++..++ ++|++++++.++++++++++|++||+ ++.+|.+
T Consensus 142 ~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~ 221 (428)
T PRK07986 142 HGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMR 221 (428)
T ss_pred CCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcc
Confidence 9999999888887653 334444555444443332 24677888888876678999999995 8889998
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC--
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-- 222 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~-- 222 (374)
.++++++++|.++|++||+++|+||+++|+|++|..|+++++++.||++++||+++||++|+|.+++++++++.+...
T Consensus 222 ~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~ 301 (428)
T PRK07986 222 IYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEA 301 (428)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999955999999999999888653
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhH
Q 017259 223 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 299 (374)
Q Consensus 223 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 299 (374)
.++.||++++++++++.++++.++++++.++++++.+++++.|+++.. + +.+.++++.|.++.+++.+.. ..
T Consensus 302 ~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~-~-~~i~~vRg~Gl~~~ve~~~~~---~~ 376 (428)
T PRK07986 302 GCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRD-A-PMVADVRVLGAIGVVETTRPV---NM 376 (428)
T ss_pred CccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-C-CCEEeEeccceEEEEEeCCcc---cH
Confidence 367899999999999999999998889999999999999999998754 4 367889999999999886543 46
Q ss_pred HHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 300 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 300 ~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.+.|+++|+++.+.+ +.+|+.|++.+|++|+++++++|.++++
T Consensus 377 ~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 377 AALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred HHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 789999999999998874 7999999999999999999999999987
No 28
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=6e-45 Score=341.15 Aligned_cols=333 Identities=35% Similarity=0.600 Sum_probs=286.6
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.+++.++.+....+.+++..+++++|.+..+.++++|++||++|++.|+++++.++ . ++ .+++++||.++++||
T Consensus 59 ~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~-~-~~-~~~r~~ii~~~~~yH 135 (395)
T PRK03715 59 EALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWG-R-KH-KNGAYEIITFDHSFH 135 (395)
T ss_pred HHHHHHHHhcccccccccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHh-h-cc-CCCCcEEEEECCCcC
Confidence 67888888876655556678888999999987778899999999999999999998763 1 22 234588999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+..+++...++..+.|...++...+++|++++++.+. ++++++++||+++++|.+.++++++++|.++|++|
T Consensus 136 G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~ 212 (395)
T PRK03715 136 GRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQH 212 (395)
T ss_pred CChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc
Confidence 999999988887767766766666666677889999999886 57999999999999999999999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+|++|..++++++++.||++++||++++|+ |+|++++++++. .+....++.||+++++++++++++
T Consensus 213 ~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G~-p~~av~~~~~i~-~~~~~~~~~T~~g~pl~~aaala~ 290 (395)
T PRK03715 213 GLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGGV-PLAALLAKAEVA-VFEAGDQGGTYNGNPLMTAVGVAV 290 (395)
T ss_pred CCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCCc-ceEEEEEccccc-cccCCCcCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 999999998875 344445678999999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHC---CeEeccCCC
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER---GILAKPTHD 318 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~ 318 (374)
++.++++++.++++++.+++++.|+++...+ + +...++.|.++.+++.+. ....+.+.+.+. |+++.+...
T Consensus 291 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~-i~~vrG~Glm~~i~l~~~----~~~~~~~~~~~~~~~Gi~~~~~~~ 364 (395)
T PRK03715 291 ISQLLAPGFLEGVRARGEYLKEKLLELSEER-G-LEGERGEGLLRALLLGKD----IGPQIVEKARDMQPDGLLLNAPRP 364 (395)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHhhcC-C-cCeEEcceeEEEEEecCc----hHHHHHHHHHhccCCCEEEeecCC
Confidence 9999888999999999999999999887665 3 455788999999998653 345666666666 999987667
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+.+|++|++.+|++|+++++++|+++++ .+
T Consensus 365 ~~lR~~p~l~~t~~ei~~~~~~l~~~l~-~~ 394 (395)
T PRK03715 365 NLLRFMPALNVTTEEIDQMIAMLRSVLD-KL 394 (395)
T ss_pred CEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence 8999999999999999999999999987 54
No 29
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-45 Score=321.48 Aligned_cols=330 Identities=32% Similarity=0.493 Sum_probs=287.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
+|+.+|+.+++|+++.+.+++..++++.|.+.+ +.+.++|+||||||+++|+++++.|+ | .-+||..+.+
T Consensus 73 ~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt----~----~~diIa~r~~ 144 (442)
T KOG1404|consen 73 AAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYT----G----NLDIIARRNS 144 (442)
T ss_pred HHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhc----C----CceEEEeecc
Confidence 688999999999999999999999999999987 66789999999999999999999875 2 2689999999
Q ss_pred CCCcccccccccCCccccccCCCCCCCceeccCCC------------------HHHHHHHHHh-cCCcEEEEEEccccCC
Q 017259 80 FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIAGFLFEPIQGE 140 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~~-~~~~~~~vi~~~~~~~ 140 (374)
|||.+..+..+++.+.++..+......+.....+| .+++++.+.. -++++++++.|++++.
T Consensus 145 YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGv 224 (442)
T KOG1404|consen 145 YHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGV 224 (442)
T ss_pred ccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccC
Confidence 99999999999998888765544432332222221 2455555554 3467999999999999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcC
Q 017259 141 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 220 (374)
Q Consensus 141 ~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~ 220 (374)
+|.+.+.+.++++..++|+++|.++|.||+++||||+|..|.++..++.||++|++|++|+|+ |+|+++.++++.+.+.
T Consensus 225 gG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~-Pl~AVvtt~EIa~v~~ 303 (442)
T KOG1404|consen 225 GGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGF-PLGAVVTTPEIADVLN 303 (442)
T ss_pred CccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCC-cceeeecCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 9999999999999988
Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----
Q 017259 221 PGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 295 (374)
Q Consensus 221 ~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---- 295 (374)
+.. +..||++++++++++.++|+.+++++++++....+.++.+.|.++.+.+| ++.++++.|+++++++-++..
T Consensus 304 ~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~-iIGdVRG~GLm~GvE~V~dk~~~~p 382 (442)
T KOG1404|consen 304 QKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHP-IIGDVRGRGLMLGVELVSDKSEPKP 382 (442)
T ss_pred hccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCC-ceeecccceeEEEEEEecccCCCCC
Confidence 765 78899999999999999999999999999999999999999999999874 999999999999999844431
Q ss_pred --chhHHHHHHHHHHCCeEeccC--CCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 296 --PVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 296 --~~~~~~~~~~l~~~Gi~v~~~--~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
......+.+.+.+.|+.+.-+ .++.+||+||++.|++|++.+++..
T Consensus 383 p~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 383 PATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 234567889999999999665 3679999999999999998777755
No 30
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=341.70 Aligned_cols=341 Identities=30% Similarity=0.534 Sum_probs=287.8
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC-C--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG-Y--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~-~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+..+ .+.++...+++++|++... . ++++|++||++|++.|+++++.+. | +.+|+.++
T Consensus 65 ~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~t----g----r~~ii~~~ 136 (445)
T PRK08593 65 EAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT----G----RPYIISFT 136 (445)
T ss_pred HHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEEC
Confidence 688999998877654 3568889999999999872 2 689999999999999999998653 3 47899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCCCH-----------------HHHHHHHHhc--CCcEEEEEEccc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKES--GDQIAGFLFEPI 137 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~l~~~--~~~~~~vi~~~~ 137 (374)
++|||.+..+.++++. ..++..+.|..+++..+++++. +++++.+.++ ++++++|++||+
T Consensus 137 ~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv 216 (445)
T PRK08593 137 NAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETI 216 (445)
T ss_pred CCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccc
Confidence 9999999998888764 3344555555566655555421 3455555432 367999999999
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 138 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 138 ~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
++++|.+.++++++++|.++|++||+++|+||+|+||+++|..++...+++.||++++||++++|+ |+|++++++++++
T Consensus 217 ~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~-p~gav~~~~~i~~ 295 (445)
T PRK08593 217 QGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGM-PMSAIVGRKEIME 295 (445)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCc-ccEEEEEcHHHHh
Confidence 999999999999999999999999999999999999999999888888899999999999999998 9999999999999
Q ss_pred hcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC--
Q 017259 218 CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-- 295 (374)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-- 295 (374)
.+....+.+|+++++++++++.++++.++++++.++++++.+++++.|+++...+| .+.++++.|.++.+++..+..
T Consensus 296 ~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gi~l~~~~~~~ 374 (445)
T PRK08593 296 SLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSIGIDIVSDKKLK 374 (445)
T ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccceEEEEEEecCCCcC
Confidence 88765677899999999999999999998889999999999999999999887774 888999999999998853210
Q ss_pred ---chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 296 ---PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 296 ---~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
......++..|+++||++.+...+.+|+.|++.+|++|+++++++|+++++ .+....
T Consensus 375 ~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~-~~~~~~ 434 (445)
T PRK08593 375 TRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFT-ALEAGK 434 (445)
T ss_pred CCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HHhccc
Confidence 123567899999999999876678999999999999999999999999998 765433
No 31
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=342.69 Aligned_cols=343 Identities=29% Similarity=0.440 Sum_probs=287.1
Q ss_pred ChHHHHHHHhccccC--cCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSS--RAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|+.++++++.+.. +.+.++...+++++|++.. +.++++|++||++|++.|+++++.+. ..+| ..++.+|+.+
T Consensus 70 ~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~-~~~g-~t~r~~il~~ 147 (460)
T PRK06105 70 VEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYN-NALG-RPEKKKIISR 147 (460)
T ss_pred HHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEe
Confidence 368899998876533 2356888899999999987 35799999999999999999998653 2233 2346899999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCC------------------HHHHHHHHHhc-CCcEEEEEEccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIAGFLFEPI 137 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~~~-~~~~~~vi~~~~ 137 (374)
..+|||.+..+.++++.+..+..+.+...++..+++++ .+++++.+.+. ++++++|++||+
T Consensus 148 ~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPi 227 (460)
T PRK06105 148 QRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPV 227 (460)
T ss_pred cCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccc
Confidence 99999999998888776655555655545555554432 35678777543 468999999999
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 138 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 138 ~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
++.+|.+.++++++++|.++|++||+++|+||+++|||++|..|+++++++.||++++||+++||++|+|++++++++++
T Consensus 228 qg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~ 307 (460)
T PRK06105 228 MGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYD 307 (460)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998449999999999988
Q ss_pred hcCCC-------CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe
Q 017259 218 CIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 290 (374)
Q Consensus 218 ~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 290 (374)
.+... .+++||++++++++++.++|+.+.++++.+++++..+++++.|+++ .++ +.+.++++.|.++.+++
T Consensus 308 ~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~-~~v~~vrG~Gl~~gie~ 385 (460)
T PRK06105 308 PIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADH-PLVGEVRGVGLIAAVEL 385 (460)
T ss_pred HHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcC-CCeEEEEecceEEEEEE
Confidence 77531 3678999999999999999999998899999999999999999998 666 48889999999999988
Q ss_pred ccCCC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 291 DKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 291 ~~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+.. ......+...++++|+++.+. ++.+|++|+++.|++|+++++++|.++++ ++
T Consensus 386 ~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~-g~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~ 450 (460)
T PRK06105 386 VADKATKTPFEPPGKVGARANAAAHEHGVISRAM-GDTLAFCPPLIITAAQVDEMVDRFGRALD-DV 450 (460)
T ss_pred ecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec-CCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence 43211 012357888899999999886 46999999999999999999999999998 55
No 32
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-44 Score=341.94 Aligned_cols=342 Identities=26% Similarity=0.456 Sum_probs=284.5
Q ss_pred hHHHHHHHhccccCcC--CCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSRA--FYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+++++.++.+.++. +.++...+++++|.+.. +.++++|++|||+|++.|+++++.+. ..+| ..++.+|+.+.
T Consensus 74 ~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~-~~~g-~t~r~~Ii~~~ 151 (466)
T PRK07036 74 DAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYF-NVRG-RPAKKHIITRG 151 (466)
T ss_pred HHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHH-HhcC-CCCccEEEEEc
Confidence 6888999887665442 56888999999999977 36799999999999999999998764 2233 23458999999
Q ss_pred cCCCCcccccccccCCccccccCCCCCCCceeccCCC-----------------HHHHHHHHHh-cCCcEEEEEEccccC
Q 017259 78 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAGFLFEPIQG 139 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~-~~~~~~~vi~~~~~~ 139 (374)
++|||.+..+.++++.+.++..|.+....+..++.++ .+.+++.+.. .++++++|++||+++
T Consensus 152 ~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g 231 (466)
T PRK07036 152 DAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILG 231 (466)
T ss_pred CccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcC
Confidence 9999999998888887766666665544444433321 2345566653 457899999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccc-cCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~-~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
++|.+.++++++++|.++|++||+++|+||+++||||+|..+.++ .+++.||+++++|+++||++|+|.+++++++++.
T Consensus 232 ~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~ 311 (466)
T PRK07036 232 SGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDV 311 (466)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHH
Confidence 999999999999999999999999999999999999999888887 6899999999999999995599999999999887
Q ss_pred cCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEec
Q 017259 219 IQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 291 (374)
Q Consensus 219 ~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 291 (374)
+.. ..+++||++++++++++.++++.++++++.+++++.++++++.|+.+ .++ +.+.++++.|.++.+++.
T Consensus 312 ~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 312 ISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-REL-PLVGDVRGDHLMACVECV 389 (466)
T ss_pred HhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccC-CCEEEEEeeceEEEEEEc
Confidence 752 24667999999999999999999988899999999999999999876 455 488899999999999984
Q ss_pred cCCC--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 292 KTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 292 ~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++.. ......+.+.|+++|+++.+.+ +.+|++|++++|++|+++++++|.++++ ++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l~Ppl~it~~~id~~~~~l~~al~-~~ 453 (466)
T PRK07036 390 ADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVLSPPLIITRAQIDEIVAILRAAIE-ET 453 (466)
T ss_pred cCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 3211 0124578889999999998764 6899999999999999999999999987 55
No 33
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-44 Score=332.77 Aligned_cols=314 Identities=36% Similarity=0.650 Sum_probs=279.1
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
++|+.++++++.+..+.+.++...+++++|+++.+.+++++++|||+|++.|+++++.+ +| +++|+.++.+|
T Consensus 46 ~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~----~g----r~~Ii~~~~sy 117 (364)
T PRK04013 46 VEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLY----TG----RKEIIAMTNAF 117 (364)
T ss_pred HHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHH----hC----CCEEEEECCcc
Confidence 36889999988777666788999999999999888899999999999999999999865 23 48999999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
||.+..+.++++.+.++.++.|...++..++++|++.+++.+. +++++++++|+++.+|...++++++++|.++|++
T Consensus 118 HG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~ 194 (364)
T PRK04013 118 HGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTED 194 (364)
T ss_pred ccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999988888888888888888889999999999998886 5899999999999999999999999999999999
Q ss_pred cCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 161 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
||+++|+||+++|+ |+|..+.++++++.||+++++|++++|+ |+|.++.++++ ....+++||++++++++++.+
T Consensus 195 ~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lggG~-P~~a~~~~~~~----~~~~~~~T~~gnp~~~aaa~a 268 (364)
T PRK04013 195 VGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGNGV-PVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAV 268 (364)
T ss_pred cCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccCCc-eeEEEEecccc----cCCCcCCCCCcCHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999998 99999888765 234578899999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCE
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 320 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 320 (374)
.++.++++++.++.++. ++++. . +.+.++++.|.++.+++.. ....+.+.++++|+++.+.+.+.
T Consensus 269 ~l~~i~~~~l~~~~~~~-------l~~l~-~--~~v~~vRG~Gl~~gve~~~-----~~~~i~~~~~~~Gll~~~~g~~v 333 (364)
T PRK04013 269 TLRILRRERLVEKAGEK-------FIEIK-G--ERVVTTRGRGLMIGIVLKK-----PVGKYVEELQNRGYLVHTAGQRV 333 (364)
T ss_pred HHHHHHhccHHHHHHHH-------HHHhc-c--CcceeeeeCcEEEEEEeCC-----cHHHHHHHHHhCCcEEeeCCCCE
Confidence 99999988888887664 22332 1 3677899999999999964 35678999999999998876789
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 321 VRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+|+.||+..|++|+++++++|+++++
T Consensus 334 lr~~Ppl~it~~~i~~~~~~l~~~l~ 359 (364)
T PRK04013 334 IRLLPPLIISKDTMEEAKSAIEGVIN 359 (364)
T ss_pred EEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987
No 34
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=4e-44 Score=339.40 Aligned_cols=340 Identities=32% Similarity=0.508 Sum_probs=284.9
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .+.++...+++++|++.. +.++++|++||++|++.|+++++.+. ..+| ..++.+|+.+.+
T Consensus 69 ~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~-~~~g-~~~r~~ii~~~~ 146 (442)
T PRK13360 69 EAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYH-RARG-EGSRTRLIGRER 146 (442)
T ss_pred HHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEEcC
Confidence 688899988766554 356888899999999986 46899999999999999999998764 2223 234589999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCC------------------HHHHHHHHHhc-CCcEEEEEEccccC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIAGFLFEPIQG 139 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~~~-~~~~~~vi~~~~~~ 139 (374)
+|||.+..+.++++....+..+.+....+..+|+.. .+++++.+..+ ++++++|++||+++
T Consensus 147 ~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g 226 (442)
T PRK13360 147 GYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAG 226 (442)
T ss_pred CcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccC
Confidence 999999998888887766666665555555554431 45788888754 36899999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
.+|.+.++++++++|.++|++||+++|+||+++|+|++|..++++++++.||++++||++++|++|+|.+++++++++.+
T Consensus 227 ~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~ 306 (442)
T PRK13360 227 STGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAF 306 (442)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHh
Confidence 99999999999999999999999999999999999999999898999999999999999998844999999999998876
Q ss_pred CCC-------CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc
Q 017259 220 QPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 292 (374)
Q Consensus 220 ~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 292 (374)
... .+++||++++++++++.++++.++++++.++.+++.+++++.|+++.. + +.+.++++.|.++.+.+..
T Consensus 307 ~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~-~~v~~vrG~Gl~~~~~l~~ 384 (442)
T PRK13360 307 MQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-A-PHVIDIRNLGLVGAVELAP 384 (442)
T ss_pred hcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-C-CCeeeeeccceEEEEEEec
Confidence 532 366799999999999999999998889999999999999999998753 4 3677888899998887743
Q ss_pred CCC--chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 293 TAL--PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 293 ~~~--~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
... .....++...|.++||++.+. ++.+|++|++.+|++|+++++++|+++++
T Consensus 385 ~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lr~~Ppl~~t~~eid~~~~~l~~~l~ 439 (442)
T PRK13360 385 RDGKPGKRAYEVFLKCFEKGLMIRYT-GDILALSPPLIIEEAQIDELFDILAQALK 439 (442)
T ss_pred CCCCcchhHHHHHHHHHHCCcEEEec-CCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 211 113567888999999999876 46899999999999999999999999987
No 35
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-44 Score=340.65 Aligned_cols=342 Identities=28% Similarity=0.471 Sum_probs=286.3
Q ss_pred ChHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 1 MKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
++|++++++++.+... .+.++...+++++|++.. +.++++|++||++|++.|+++++.++ ...| .+++.+|+.+.
T Consensus 74 ~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~-~~~g-~~~r~~ii~~~ 151 (460)
T PRK06541 74 AEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYF-KLTG-KPGKHKVISRA 151 (460)
T ss_pred HHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHH-HhcC-CCCccEEEEEc
Confidence 3688999998766544 467888999999999976 36799999999999999999998764 1233 33468999999
Q ss_pred cCCCCcccccccccCCccccccCCCCCCCceeccCCC------------------HHHHHHHHHh-cCCcEEEEEEcccc
Q 017259 78 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIAGFLFEPIQ 138 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~~-~~~~~~~vi~~~~~ 138 (374)
++|||.+..+.++++.+.+...+.|..+++..+++++ ++.+++.+.. +++++++|+++|++
T Consensus 152 ~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~ 231 (460)
T PRK06541 152 IAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQ 231 (460)
T ss_pred CcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCcc
Confidence 9999999999988887766666666656655554332 2567777764 34689999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
+++|.+.++++++++|.++|++||+++|+||+|+|||++|..++..++++.||++++||++++|++|+|++++++++++.
T Consensus 232 g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~ 311 (460)
T PRK06541 232 NAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEP 311 (460)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHH
Confidence 99999999999999999999999999999999999999999888888999999999999999997799999999998887
Q ss_pred cCCC----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 219 IQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 219 ~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
+... .++.|++++++++++++++++.+.++++.++++++++++++.|+++.. + +.+..+++.|.++.+++.++.
T Consensus 312 ~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~-~~v~~vrg~Gl~~~ie~~~~~ 389 (460)
T PRK06541 312 FLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-L-PIVGDVRGDGYFYGIELVKDK 389 (460)
T ss_pred hhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEEEecceEEEEEEecCc
Confidence 7532 356799999999999999999998888999999999999999998865 5 477889999999999984321
Q ss_pred C-----c-h-----hHHHHHHHHHHCCeEeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 295 L-----P-V-----SAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 295 ~-----~-~-----~~~~~~~~l~~~Gi~v~~~--~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
. . . ....+.+.|+++||++.+. +.+.+|++|++.+|++|+++++++|+++++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~ 454 (460)
T PRK06541 390 ATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLT 454 (460)
T ss_pred ccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 0 0 0 1135778899999999874 457899999999999999999999999987
No 36
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.9e-44 Score=339.80 Aligned_cols=342 Identities=31% Similarity=0.500 Sum_probs=287.1
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .+.++...+++++|++.. +.++++|++||++|++.|+++++.++ ..+| .+++.+|+.+.+
T Consensus 72 ~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~-~~~g-~~~r~~ii~~~~ 149 (445)
T PRK09221 72 EAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYH-RARG-QGTRTRLIGRER 149 (445)
T ss_pred HHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEECC
Confidence 688899988766554 356888899999999987 46799999999999999999998764 2233 234589999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCC------------------HHHHHHHHHhcC-CcEEEEEEccccC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKESG-DQIAGFLFEPIQG 139 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~l~~~~-~~~~~vi~~~~~~ 139 (374)
+|||.+..+.++++.+..+..|.+...++..++++. .+++++.++.++ +++++|++||+++
T Consensus 150 ~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g 229 (445)
T PRK09221 150 GYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAG 229 (445)
T ss_pred CcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccC
Confidence 999999998888877666666666555555554431 357788887653 6899999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
.+|.+.++++++++|.++|++||+++|+||+++|||++|..+.++.+++.||++++||++++|+.|+|.+++++++++.+
T Consensus 230 ~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~ 309 (445)
T PRK09221 230 SAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAF 309 (445)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhh
Confidence 99999999999999999999999999999999999999999899999999999999999998854999999999988877
Q ss_pred CC-------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc
Q 017259 220 QP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 292 (374)
Q Consensus 220 ~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 292 (374)
.. ..+++||++++++++++.++++.++++++.++.+++.+++++.|+++. .+ +.+.++++.|.+..+++..
T Consensus 310 ~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-~~-~~v~~vrg~Gl~~~v~~~~ 387 (445)
T PRK09221 310 MQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-GL-PHVIDIRNIGLVAGIELAP 387 (445)
T ss_pred ccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cC-CCEEEEecCceEEEEEEec
Confidence 53 135679999999999999999999888999999999999999999874 34 3677889999999988853
Q ss_pred CCC--chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 293 TAL--PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 293 ~~~--~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
... .....++.+.|+++|+++.+. ++.+|++|++.+|++|+++++++|+++++ ++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~lr~~Ppl~~t~~eid~~~~~l~~~l~-~~ 444 (445)
T PRK09221 388 RPGAPGARGYEAFMKCFEKGLLVRYT-GDTIALSPPLIIEKAQIDELVDALGDALR-AV 444 (445)
T ss_pred ccccccchHHHHHHHHHHCCeEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence 211 113467889999999999876 57899999999999999999999999997 54
No 37
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.4e-44 Score=340.33 Aligned_cols=342 Identities=31% Similarity=0.518 Sum_probs=287.2
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .++++...+++++|++.. +.++++|++||++|++.|+++++.+. ..+| ..++.+|+.+++
T Consensus 65 ~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~-~~~~-~~~r~~ii~~~~ 142 (423)
T PRK05964 65 QAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYW-RNRG-EPGRSRFLSLRG 142 (423)
T ss_pred HHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEEcC
Confidence 688899988776544 466888899999999987 46899999999999999999999774 2233 235689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCC--C-----HHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--D-----ITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGY 150 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d-----~~~le~~l~~~~~~~~~vi~~~-~~~~~g~~~~~~~~ 150 (374)
+|||.+..+.++++...+...+.+...++..++++ | ++++++.+.++++++++++++| +++.+|...+++++
T Consensus 143 ~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~ 222 (423)
T PRK05964 143 GYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRY 222 (423)
T ss_pred CcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHH
Confidence 99999999888887766665565555555555553 4 7888888887667899999999 69999999999999
Q ss_pred HHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC------CC
Q 017259 151 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG------EH 224 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~------~~ 224 (374)
+++|.++|++||+++|+||+|+|++++|..++++.+++.||++++||+++||++|+|++++++++++.+... .+
T Consensus 223 l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~ 302 (423)
T PRK05964 223 LAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMH 302 (423)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCccccccc
Confidence 999999999999999999999999999988888888999999999999998833999999999998887532 35
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 225 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 225 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
+.||++++++++++.++++.++++++.++++++.+++++.|+++.. +| .+...++.|.++.+.+.+.........+.+
T Consensus 303 ~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-~~-~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~ 380 (423)
T PRK05964 303 SPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-LP-GVADVRVLGAIGAVELDRPVLERDGPALRA 380 (423)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-CC-CeEEeecccEEEEEEeccCcchhHHHHHHH
Confidence 6788999999999999999998888999999999999999988743 43 556678889999988864310012668999
Q ss_pred HHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 305 KMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 305 ~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.|.++||++.+. .+.+|++|++.+|++|+++++++|+++++ ++
T Consensus 381 ~l~~~Gv~v~~~-~~~lR~~p~l~~t~edId~~v~~l~~al~-~~ 423 (423)
T PRK05964 381 FALERGVLLRPL-GNTIYLMPPYIITAEELDRITDAIVEVAD-EL 423 (423)
T ss_pred HHHHCCeEEEec-CCEEEEeCCcccCHHHHHHHHHHHHHHHh-hC
Confidence 999999999886 47899999999999999999999999997 53
No 38
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6e-44 Score=337.43 Aligned_cols=335 Identities=35% Similarity=0.603 Sum_probs=283.6
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+... .++++...+++++|++... .++++|++|||+|++.|+++++.+. | +.+|+.++
T Consensus 63 ~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~ 134 (421)
T PRK06777 63 AAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYT----G----RPGVIAFG 134 (421)
T ss_pred HHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhh----C----CCeEEEEc
Confidence 688999998776543 3567888999999999763 5799999999999999999998653 3 47899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCCC----------HHHHHHHHHh--cCCcEEEEEEccccCCCCcc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVI 144 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~l~~--~~~~~~~vi~~~~~~~~g~~ 144 (374)
++|||.+..+.++++. ..++..+.|...++..+++++ ++.+++.+++ ++++++++++||+++++|..
T Consensus 135 ~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~ 214 (421)
T PRK06777 135 GAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFN 214 (421)
T ss_pred CCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCc
Confidence 9999999998887764 335555666555566555543 5667887764 45789999999999999988
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 224 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~ 224 (374)
.++++++++|.++|++||+++|+||+|+|++++|..++...+++.||++++||++++|+ |+|++++++++++.+....+
T Consensus 215 ~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~-pigav~~~~~i~~~~~~~~~ 293 (421)
T PRK06777 215 VAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGM-PISAVVGRAEVMDAPAPGGL 293 (421)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCC-ceEEEEEcHHHHhccCCCCC
Confidence 88999999999999999999999999999999998888888899999999999999998 99999999999999887778
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----chhHH
Q 017259 225 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAY 300 (374)
Q Consensus 225 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~ 300 (374)
..||++++++++++.++|+.++++++.++++++.+++++.|+++...+| .+..+++.|.++.+.+..... .....
T Consensus 294 ~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~ 372 (421)
T PRK06777 294 GGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCP-AIVDIRARGSMVAVEFNDPQTGKPSPEFTR 372 (421)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEecCceEEEEEEEecCccCCccHHHHH
Confidence 8899999999999999999988889999999999999999999877664 777889999999987743211 11245
Q ss_pred HHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.|+++||++.+++ ++++||.|++..+++++++++++|++++.
T Consensus 373 ~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 373 QYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 56777789999998864 57999999999999999999999998874
No 39
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.3e-44 Score=340.16 Aligned_cols=342 Identities=29% Similarity=0.452 Sum_probs=281.2
Q ss_pred hHHHHHHHhccccCc--CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR--AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ..+| ..++.+|+.+.
T Consensus 73 ~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~-~~~g-~~~r~~ii~~~ 150 (456)
T PRK07480 73 DAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYW-ALKG-KPQKKVIISRK 150 (456)
T ss_pred HHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEEC
Confidence 688899998765443 356889999999999987 46799999999999999999998764 2233 23458999999
Q ss_pred cCCCCcccccccccCCccccccCCCCCCCceeccCC---------------C--HHHHHHHHH-hcCCcEEEEEEccccC
Q 017259 78 GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG---------------D--ITALEKIFK-ESGDQIAGFLFEPIQG 139 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------d--~~~le~~l~-~~~~~~~~vi~~~~~~ 139 (374)
.+|||.+..+.++++...+...+.+..+++..++++ + .+.+++.+. ..++++++|++||+++
T Consensus 151 ~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg 230 (456)
T PRK07480 151 NGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQG 230 (456)
T ss_pred CCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccC
Confidence 999999988888876554444443322334333321 1 256665554 3446899999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.+
T Consensus 231 ~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 231 AGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVL 310 (456)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999966999999999998887
Q ss_pred C--C--CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHH-HHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 220 Q--P--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERS-AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 220 ~--~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
. . ..+++||++++++++++.++|+.++++++.++. ++..+++++.|+++ .++ +.+.++++.|.++.+++.++.
T Consensus 311 ~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~-~~i~~vrG~Glm~gie~~~~~ 388 (456)
T PRK07480 311 IEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADH-PLVGEVRGVGLVGAIELVKDK 388 (456)
T ss_pred hcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcC-CCeeeEEeecceEEEEEeccc
Confidence 3 2 247789999999999999999999888999999 59999999999986 445 478889999999999984321
Q ss_pred C--------chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 L--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 ~--------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. ......+.+.|+++|+++.+. .+.+|++|++.+|++|+++++++|.++++ ++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-~~~l~~~Ppl~it~~eid~~~~~l~~al~-~~ 449 (456)
T PRK07480 389 ATRERFEAGGGVGTICRDHCFANGLIMRAV-GDRMIISPPLVITHAEIDELVEKARKALD-AT 449 (456)
T ss_pred cccccCcchhhHHHHHHHHHHHCCcEEeec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 1 001356778899999999875 47899999999999999999999999998 65
No 40
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-44 Score=340.47 Aligned_cols=334 Identities=31% Similarity=0.494 Sum_probs=281.4
Q ss_pred hHHHHHHHhcc-ccCcCCCCCcHHHHHHHHhcccCC-----CeEEec-CChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 2 KALQEQAEKLT-LSSRAFYNDKFPVFAERLTSMFGY-----DMVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 2 ~a~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~-~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
+|+++++++.. +....+.++...+++++|.+.... ++++|+ +|||+|++.|+++++.+. ++.+|+
T Consensus 86 ~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~t--------gr~~ii 157 (464)
T PRK06938 86 EAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTAT--------GRSTVL 157 (464)
T ss_pred HHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhh--------CCCeEE
Confidence 67888887533 332346688899999999987631 366565 799999999999998652 348999
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCC-----------------CHHHHHHHHHhcC---CcEEEEEE
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESG---DQIAGFLF 134 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~l~~~~---~~~~~vi~ 134 (374)
.+.++|||.+..+.++++...++..+.+...++..++++ +++.+++.+.+.. +++++|++
T Consensus 158 ~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~ 237 (464)
T PRK06938 158 SFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVIL 237 (464)
T ss_pred EECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 999999999999998887666666666655555555543 1566788886432 47999999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHH
Q 017259 135 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKE 214 (374)
Q Consensus 135 ~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~ 214 (374)
||+++.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||+ |+|.++++++
T Consensus 238 EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~-PlsAv~~~~~ 316 (464)
T PRK06938 238 EVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSL-PLAVVVYREW 316 (464)
T ss_pred ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCC-ceEEEeehhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 9999999888
Q ss_pred HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 215 VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
+ +.+....+++||++++++++++++.++.++++++.++.++..+++++.|+++..++| .+.++++.|.++.+++.++.
T Consensus 317 ~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Glm~gie~~~~~ 394 (464)
T PRK06938 317 L-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVEIVDPQ 394 (464)
T ss_pred h-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEeccCc
Confidence 5 666666688999999999999999999998889999999999999999999987774 88999999999999984321
Q ss_pred C-----------chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 295 L-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 295 ~-----------~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
. ......+.+.|+++|+++.+.+ .+.+|+.|++.+|++|++++++++++++.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~ 459 (464)
T PRK06938 395 GEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVA 459 (464)
T ss_pred ccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 0 0124568889999999998753 58999999999999999999999999987
No 41
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=5.2e-44 Score=338.52 Aligned_cols=335 Identities=33% Similarity=0.547 Sum_probs=281.9
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+.++++++.+... ..+++...+++++|++.. +.++++|++|||+|++.|+++++.+. | +.+|+.+.
T Consensus 56 ~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~ 127 (420)
T TIGR00700 56 DAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYT----G----RPGVVAFD 127 (420)
T ss_pred HHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhc----C----CCcEEEEC
Confidence 688899988776554 356778899999999976 24789999999999999999998763 3 37899999
Q ss_pred cCCCCcccccccccCCc-cccccCCCCCCCceeccCC----------------CHHHHHHHHH--hcCCcEEEEEEcccc
Q 017259 78 GCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----------------DITALEKIFK--ESGDQIAGFLFEPIQ 138 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------d~~~le~~l~--~~~~~~~~vi~~~~~ 138 (374)
++|||.+..+.++++.. .+..++.|...++..++++ +++.+++.+. ..++++++|++||++
T Consensus 128 ~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~ 207 (420)
T TIGR00700 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQ 207 (420)
T ss_pred CCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCcc
Confidence 99999999988877642 3455555554555544442 2556777664 345789999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
+.+|.+.++++++++|.++|++||+++|+||+|+||+++|..+++..+++.||++++||++++|+ |+||+++++++++.
T Consensus 208 g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~-pig~v~~~~~i~~~ 286 (420)
T TIGR00700 208 GEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGL-PLSGVTGRAEIMDA 286 (420)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCc-ceEEEEecHHHHhh
Confidence 99999999999999999999999999999999999999998778888889999999999999998 99999999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC----
Q 017259 219 IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 294 (374)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 294 (374)
+....+..||++++++++++.++++.++++++.+++++..+++++.|+++...+| .+..+++.|.++++.+.+..
T Consensus 287 ~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~~~~~ 365 (420)
T TIGR00700 287 PAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDP-RIGDVRGLGAMIAVELVDPGTTEP 365 (420)
T ss_pred cCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEeeccceEEEEEEecCCCCCc
Confidence 8877788899999999999999999988889999999999999999999877664 66778888999999883221
Q ss_pred CchhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 295 LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 295 ~~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.......+.+.|.++||.+.|+. ++++|++|++..+++++++++++|.++++
T Consensus 366 ~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 366 DAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred cHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 01235678888889999998864 58999999999999999999999998875
No 42
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-44 Score=339.87 Aligned_cols=335 Identities=30% Similarity=0.549 Sum_probs=278.5
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+.++++++.++.. .+.++...+++++|++.++ .++++|++||++|++.|+++++.+. | +++|+.+.
T Consensus 79 ~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~ 150 (443)
T PRK06058 79 EAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYT----G----RQAVVVFD 150 (443)
T ss_pred HHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhh----C----CCeEEEEC
Confidence 688899988765443 2567888999999999873 3689999999999999999998652 2 37899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccC----CCH--------HHHHHH---HHh--cCCcEEEEEEccccC
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDF----GDI--------TALEKI---FKE--SGDQIAGFLFEPIQG 139 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~d~--------~~le~~---l~~--~~~~~~~vi~~~~~~ 139 (374)
++|||.+..+.++++. ..+..++.+...++..+++ ++. +.+++. +++ .++++++|++||+++
T Consensus 151 ~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g 230 (443)
T PRK06058 151 HAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQG 230 (443)
T ss_pred CCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccC
Confidence 9999999998887653 2344455444444443332 221 112221 222 236899999999999
Q ss_pred CCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 140 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 140 ~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
.+|.+.++++++++|.++|++||+++|+||+++||+|+|..|+++++++.||+++++|++++|+ |+|++++++++++.+
T Consensus 231 ~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~-Pi~av~~~~~i~~~~ 309 (443)
T PRK06058 231 EGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGL-PLSAVTGRAEIMDAP 309 (443)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCC-ccEEEEEcHHHHhhc
Confidence 9999999999999999999999999999999999999999888888999999999999999998 999999999999998
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----
Q 017259 220 QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 295 (374)
Q Consensus 220 ~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---- 295 (374)
....++.||++++++++++.++++.++++++.++++++++++.+.|+++...+ +.+.++++.|.++.+++.++..
T Consensus 310 ~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrg~G~~~~i~~~~~~~~~~~ 388 (443)
T PRK06058 310 HPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAED-DRIGDVRGRGAMIAIELVKPGTTEPD 388 (443)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhC-CcEEeeeccceEEEEEEecCCCCCCc
Confidence 87778899999999999999999999888999999999999999999987766 4888899999999998843211
Q ss_pred chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 296 PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 ~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
......+.+.|+++||++.+.. ++++|+.|++.+|++++++++++|+++++
T Consensus 389 ~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 389 AELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALA 441 (443)
T ss_pred HHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 1235678888899999998753 58999999999999999999999999987
No 43
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=5.1e-44 Score=337.90 Aligned_cols=335 Identities=33% Similarity=0.580 Sum_probs=286.0
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+... .+.++...+++++|++... .++++|++||++|++.|+++++.+. | +.+|+.+.
T Consensus 63 ~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~ 134 (421)
T PRK09792 63 AAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT----G----RPGVIAFS 134 (421)
T ss_pred HHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhc----C----CCeEEEEC
Confidence 688899988766543 3568888999999999763 3689999999999999999998652 3 47899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCC----------CHHHHHHHHHh--cCCcEEEEEEccccCCCCcc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG----------DITALEKIFKE--SGDQIAGFLFEPIQGEAGVI 144 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------d~~~le~~l~~--~~~~~~~vi~~~~~~~~g~~ 144 (374)
++|||.+..+.++++. +.+..++.|...++..++++ +++.+++.+++ .++++++++++|+++++|..
T Consensus 135 ~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~ 214 (421)
T PRK09792 135 GGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFN 214 (421)
T ss_pred CCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCc
Confidence 9999999998887664 34566666665566666663 34778887764 24679999999999999988
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 224 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~ 224 (374)
.++++++++|.++|++||+++|+||+++||++.|..+++..++..||+++|||++++|+ |+|++++++++++.+....+
T Consensus 215 ~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~~~~~~~~~ 293 (421)
T PRK09792 215 VAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIMDAPAPGGL 293 (421)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHHhccCCCCc
Confidence 88999999999999999999999999999999998888888889999999999999998 99999999999998887778
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----chhHH
Q 017259 225 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAY 300 (374)
Q Consensus 225 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~ 300 (374)
..||++++++++++.++++.++++++.+++++..+++++.|+.+...+| .+..+++.|.++++++++... .....
T Consensus 294 ~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p-~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~ 372 (421)
T PRK09792 294 GGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVP-AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQ 372 (421)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCC-CcceecccceEEEEEecCCccCCcchHHHH
Confidence 8999999999999999999998888999999999999999999887775 677889999999999964311 12467
Q ss_pred HHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.|+++|+++.+.+ ++.+|+.|++..+++++++++++|.++++
T Consensus 373 ~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 373 KIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 78999999999997533 58999999999999999999999999875
No 44
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=5e-44 Score=337.05 Aligned_cols=332 Identities=31% Similarity=0.511 Sum_probs=282.1
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--C--C-CeEEe-cCChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--G--Y-DMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~--~-~~~~~-~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
+|+++++++..+... .+.++...+++++|++.. + . ++++| ++||++|++.|+++++.+. | +.+|+
T Consensus 58 ~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii 129 (412)
T TIGR02407 58 QALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVT----G----RSNVV 129 (412)
T ss_pred HHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhc----C----CCeEE
Confidence 678888886544333 345788889999999863 2 2 25655 5999999999999998652 2 47899
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCC--------CHHHHHHHHHhcC---CcEEEEEEccccCCCCc
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQGEAGV 143 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~l~~~~---~~~~~vi~~~~~~~~g~ 143 (374)
.++++|||.+..+.++++.+.++..+.+...++..+|++ +++.+++.+.+++ +++++++++|+++++|.
T Consensus 130 ~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~ 209 (412)
T TIGR02407 130 SFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGI 209 (412)
T ss_pred EECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCC
Confidence 999999999999998888776676666655566777764 3777888887543 46899999999999999
Q ss_pred ccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccC-CccchhhheeCHHHHhhcCCC
Q 017259 144 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPG 222 (374)
Q Consensus 144 ~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~G~~~~~~~~~~~~~~~ 222 (374)
+.++++++++|.++|++||+++|+||+++||||+|..++++.+++.||++++||++++ |+ |+|++++++++ +.+...
T Consensus 210 ~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~-pigav~~~~~~-~~~~~~ 287 (412)
T TIGR02407 210 NVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGL-PLALTLIKPEL-DVWKPG 287 (412)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCcc-ceeEEEEchhh-hccCCC
Confidence 8999999999999999999999999999999999999888889999999999999998 98 99999998886 666656
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-HhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHH
Q 017259 223 EHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 223 ~~~~~~~~~~~~~~aa~~al~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 301 (374)
.+..||++++++++++.++++. +.++++.+++++.+++++++|+.+...+|..+...++.|.++|+.+++.. ...+
T Consensus 288 ~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~---~~~~ 364 (412)
T TIGR02407 288 EHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD---LAGK 364 (412)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH---HHHH
Confidence 6788999999999999999995 77778999999999999999999887775456778889999999997543 5678
Q ss_pred HHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 302 ICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+.|+++||++.+.+ .+.+|++|++.++++|+++++++|+++++
T Consensus 365 ~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 365 IAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred HHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999998653 57999999999999999999999999886
No 45
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.3e-44 Score=336.66 Aligned_cols=334 Identities=27% Similarity=0.435 Sum_probs=279.4
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+... .+.++...+++++|++.. +.++++|++|||+|++.|+++++.++ ..+| .+++.+|+.+.+
T Consensus 63 ~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~-~~~g-~~~r~~ii~~~~ 140 (422)
T PRK05630 63 AAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYS-KGQG-HPERTRLLTWRS 140 (422)
T ss_pred HHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH-HhcC-CCCCcEEEEECC
Confidence 688899998777554 356888899999999987 46899999999999999999999774 2234 345689999999
Q ss_pred CCCCcccccccccCC-ccccccCCCCCCCceeccCC--------C----HHHHHHHHHhcCCcEEEEEEccc-cCCCCcc
Q 017259 79 CFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG--------D----ITALEKIFKESGDQIAGFLFEPI-QGEAGVI 144 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------d----~~~le~~l~~~~~~~~~vi~~~~-~~~~g~~ 144 (374)
+|||.+..+.++++. ..++..+.|...++..+|++ + .+.+++.+. ++++++++||+ ++.+|.+
T Consensus 141 ~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~ 217 (422)
T PRK05630 141 GYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMR 217 (422)
T ss_pred CcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcc
Confidence 999999998887663 33444444443344443332 1 233444444 58999999996 9999999
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC--
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-- 222 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~-- 222 (374)
.++++++++|.++|++||+++|+||+++|+|++|..++++.+++.||+++++|+++||+.++|++++++++++.+...
T Consensus 218 ~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~ 297 (422)
T PRK05630 218 FHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNG 297 (422)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999999999999999999955899999999998887531
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchh
Q 017259 223 ----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 298 (374)
Q Consensus 223 ----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 298 (374)
.++.||.+++++++++.++++.++++++.++++++.+++++.|+.+.. +| .+.++++.|.++.+++.+.. .
T Consensus 298 ~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~-~v~~vRg~Gl~~~ie~~~~~---~ 372 (422)
T PRK05630 298 GGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAH-LP-GVADVRVLGAIGVVEMEQPV---D 372 (422)
T ss_pred CCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhc-CC-CeeeeeccccEEEEEECCcc---c
Confidence 467899999999999999999998888999999999999999987643 43 67889999999999996542 4
Q ss_pred HHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 299 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 299 ~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
...+.+.|+++|+++.+.+ +.+|+.|+++.|++|+++++++|+++++
T Consensus 373 ~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 373 MEEATQAAVDHGVWLRPFG-RLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred HHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 6789999999999998874 7999999999999999999999999987
No 46
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.3e-43 Score=335.01 Aligned_cols=337 Identities=34% Similarity=0.542 Sum_probs=286.0
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+....+.++...+++++|++..+.++++|++||++|++.|+++++.++.. .+ ..++++|+.++.+||
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~-~~-~~~~~~ii~~~~~~H 140 (403)
T PRK05093 63 KALKEQGEKLWHISNVFTNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACD-RH-GPEKTEIIAFHNSFH 140 (403)
T ss_pred HHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhh-cC-CCCCCeEEEEcCCcC
Confidence 5777888776555444567778899999999888889999999999999999999876421 11 234589999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+..+..+++.+.+..++.+...++..++++|++.+++.+. +++++|+++|+++++|.+.++++++++|.++|++|
T Consensus 141 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~ 217 (403)
T PRK05093 141 GRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQH 217 (403)
T ss_pred CchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence 999888777776666666666666788899999999999886 57999999999888888888999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+++.|..++...+++.||+.||||++++|+ |+||+++++++++.+....+..+++++++.++++.++
T Consensus 218 g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~ 296 (403)
T PRK05093 218 NALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAV 296 (403)
T ss_pred CCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999988887666667788999999999999998 9999999999999988766778899999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+..+++.++++++.+++.+.|+++...+ ......++.|.++|+.++... .....++++.|+++||.+.+.+.+++
T Consensus 297 L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~G~~~~~~l~~~~-~~~~~~~~~~l~~~Gv~v~~~g~~~l 374 (403)
T PRK05093 297 FDIINTPEVLEGVKARRQRFVDGLQKINQKY-GVFSEIRGMGLLIGAELKPQY-KGRARDFLNAAAEEGVMVLVAGPDVL 374 (403)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhC-CCeEeEeeCceEEEEEecCcc-hhHHHHHHHHHHHCCeEEecCCCCEE
Confidence 9988777889999999999999999886544 245567777999999885421 01467899999999999998777899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|++|++..+++++++++++|+++++
T Consensus 375 Rl~~~~~~~~~~i~~~~~~l~~~l~ 399 (403)
T PRK05093 375 RFAPSLVIEEADIDEGLARFEKAVA 399 (403)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887
No 47
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=7.9e-44 Score=338.38 Aligned_cols=337 Identities=28% Similarity=0.473 Sum_probs=279.3
Q ss_pred ChHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccCC-----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 1 MKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~-----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
++|++++++++.+... .+.++...+++++|++.... ..+++++|||+|++.|+++++.+. | +.+|+
T Consensus 61 ~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~t----g----r~~Ii 132 (442)
T TIGR00709 61 KQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYT----G----RTNVI 132 (442)
T ss_pred HHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEE
Confidence 3688899988665443 36678899999999998731 335667999999999999999763 3 47899
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCCCH-----------------HHHHHHHHh---cCCcEEEEEE
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKE---SGDQIAGFLF 134 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~l~~---~~~~~~~vi~ 134 (374)
.+.++|||.+..+.++++.+.++.++.+..+++..+++++. +.+++.+.+ .+++++++++
T Consensus 133 ~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~ 212 (442)
T TIGR00709 133 SFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVIL 212 (442)
T ss_pred EEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 99999999999999888766555555555555555554321 123444432 2357999999
Q ss_pred ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHH
Q 017259 135 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKE 214 (374)
Q Consensus 135 ~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~ 214 (374)
+|+++++|.+.++++++++|.++|++||+++|+||+++||+|+|..++++++++.||++++||++++|+ |+|+++++++
T Consensus 213 Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~-Pigav~~~~~ 291 (442)
T TIGR00709 213 EAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGL-PLAVLLIAPE 291 (442)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCc-ccEEEEEchH
Confidence 999999999999999999999999999999999999999999999889888999999999999999998 9999999888
Q ss_pred HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC
Q 017259 215 VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 294 (374)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 294 (374)
.+.+....+..||++++++++++.++|+.++++++.++++++++++.+.|+++..++| .+.++++.|.++.+++.++.
T Consensus 292 -~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~ie~~~~~ 369 (442)
T TIGR00709 292 -FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP-CIGNVRGRGLMQGIMIVDER 369 (442)
T ss_pred -HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEccCc
Confidence 4666555678899999999999999999998889999999999999999999887774 88899999999999984331
Q ss_pred C-----------chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 L-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 ~-----------~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. ......+...|+++|+++.+.. .+.+|+.|++.+|++|+++++++|+++++ ++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~ 436 (442)
T TIGR00709 370 QSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVE-EA 436 (442)
T ss_pred ccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 0 0125678888999999997653 68999999999999999999999999987 54
No 48
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-44 Score=338.12 Aligned_cols=337 Identities=31% Similarity=0.525 Sum_probs=283.8
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
++|+.++++++.+..+.+.++...+|+++|++..+ .++++|++||++|++.|+++++.+. | +.+|+.+..
T Consensus 93 ~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~t----g----r~~ii~~~~ 164 (459)
T PRK06082 93 IEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHIT----G----NFKVVSLWD 164 (459)
T ss_pred HHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhc----C----CCEEEEEeC
Confidence 36889999887766555778899999999999873 4799999999999999999998653 2 478999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceecc--------CCC--------HHHHHHHHHhcCCcEEEEEEccccCCCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FGD--------ITALEKIFKESGDQIAGFLFEPIQGEAG 142 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d--------~~~le~~l~~~~~~~~~vi~~~~~~~~g 142 (374)
+|||.+..+..+++.+.++..+.|..+++..++ +++ ++.+++.++++ +++++|++||+++. |
T Consensus 165 ~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~-g 242 (459)
T PRK06082 165 SFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNT-D 242 (459)
T ss_pred CCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCC-C
Confidence 999999888888877666666666555555443 332 34577777654 57999999999887 5
Q ss_pred cccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC
Q 017259 143 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG 222 (374)
Q Consensus 143 ~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~ 222 (374)
.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.++.++++...+...
T Consensus 243 ~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~ 322 (459)
T PRK06082 243 VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQIS 322 (459)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCC
Confidence 67789999999999999999999999999999999999999999999999999999999855999999998877554322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----ch
Q 017259 223 EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PV 297 (374)
Q Consensus 223 ~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~ 297 (374)
...+||++++++++++.++++.++++++.++++++.+++++.|+++..++| .+.++++.|.++.+++..+.. ..
T Consensus 323 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ve~~~~~~~~~~~~~ 401 (459)
T PRK06082 323 LGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYP-LIGDVRGIGLLWGVELVTDRHTKERAYD 401 (459)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeeeccceeEEEEccCccccCccHH
Confidence 222799999999999999999998889999999999999999999887774 888999999999999853211 11
Q ss_pred hHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 298 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
....+...++++|+++.+.+.+.+|++|++++|++|++++++++++++. ++
T Consensus 402 ~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~-~~ 452 (459)
T PRK06082 402 EAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIA-KI 452 (459)
T ss_pred HHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HH
Confidence 2557888899999999887679999999999999999999999999998 65
No 49
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-44 Score=338.97 Aligned_cols=337 Identities=36% Similarity=0.628 Sum_probs=284.0
Q ss_pred hHHHHHHHhccccC-cCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.++++++.+.+ ..+.++...+++++|++.. +.+.++|++||++|++.|+++++.+. | +.+|+.+++
T Consensus 66 ~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~ 137 (433)
T PRK08117 66 QAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVT----K----RPYIISFTG 137 (433)
T ss_pred HHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhc----C----CCeEEEECC
Confidence 68889998876655 3456888999999999987 46789999999999999999998653 2 478999999
Q ss_pred CCCCcccccccccCC-ccccccCCCCCCCceeccCC-----------------CHHHHHHHHHh--cCCcEEEEEEcccc
Q 017259 79 CFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKE--SGDQIAGFLFEPIQ 138 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~l~~--~~~~~~~vi~~~~~ 138 (374)
+|||.+..+.++++. +.++..+.+...++..+|++ +++++++.+++ .++++++|++||++
T Consensus 138 ~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~ 217 (433)
T PRK08117 138 CFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVL 217 (433)
T ss_pred CcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCee
Confidence 999999988776653 44445555554555555443 45667777764 34679999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
++.|.+.++++++++|.++|++||+++|+||+|+||+++|..+....+++.||++++||++++|+ |+|++++++++++.
T Consensus 218 ~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~-pigav~~~~~i~~~ 296 (433)
T PRK08117 218 GEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASGL-PLSAVVASKELMEQ 296 (433)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCCC-cceeEEEcHHHHhh
Confidence 99999999999999999999999999999999999999998877778899999999999999998 99999999999998
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---
Q 017259 219 IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--- 295 (374)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 295 (374)
+....++.||++++++++++.++++.++++++.++++.+.+++++.|+++...++ .+.++++.|.++++++.++..
T Consensus 297 ~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~Gl~~gi~~~~~~~~~~ 375 (433)
T PRK08117 297 WPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP-VIGDVRGIGLMIGIEIVDPDGEPD 375 (433)
T ss_pred ccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcEEEEEEecCCCCcc
Confidence 8776788899999999999999999997778999999999999999999876664 677889999999998843211
Q ss_pred chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 ~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
......+.+.|+++||++.+.+ .+.+|++|++.+|++++++++++|.++++ ++
T Consensus 376 ~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~ 430 (433)
T PRK08117 376 GDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALT-EY 430 (433)
T ss_pred hHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 1235678899999999887643 58999999999999999999999999998 55
No 50
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-43 Score=336.76 Aligned_cols=337 Identities=31% Similarity=0.551 Sum_probs=282.8
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.++++++.+... ...++...+|+++|++..+ .++++|++|||+|++.|+++++.+. | +.+|+.+.+
T Consensus 76 ~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~ 147 (457)
T PRK05639 76 KAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFST----R----RPWILAFIG 147 (457)
T ss_pred HHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhc----C----CCeEEEECC
Confidence 688899988766544 3446788899999999863 4799999999999999999998653 2 478999999
Q ss_pred CCCCcccccccccCC-ccccccCCCCCCCceeccCCC-------------H--------HHHHHHHHh---cCCcEEEEE
Q 017259 79 CFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-------------I--------TALEKIFKE---SGDQIAGFL 133 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-------------~--------~~le~~l~~---~~~~~~~vi 133 (374)
+|||.+..+.++++. ..++.++.|..+++..+|+++ . +.+++.+.. .++++++|+
T Consensus 148 ~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI 227 (457)
T PRK05639 148 AYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALF 227 (457)
T ss_pred CcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 999999988877653 345556666656666666642 2 234444432 247899999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCH
Q 017259 134 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK 213 (374)
Q Consensus 134 ~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~ 213 (374)
+||+++.+|.+.++++++++|.++|++||+++|+||+++|||++|..|+.+++++.||+++++|+++||+ |+|++++++
T Consensus 228 ~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~-pi~av~~~~ 306 (457)
T PRK05639 228 AEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM-GLSGVIGRK 306 (457)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-cceeEEehH
Confidence 9999999999999999999999999999999999999999999999889999999999999999999998 999999999
Q ss_pred HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 214 EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
++++. ....+..|++++++++++++++++.++++++.++.+++.+++++.|+++...+ +++.++++.|.++.+++..+
T Consensus 307 ~i~~~-~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~~~~VrG~Gl~~gve~~~~ 384 (457)
T PRK05639 307 ELMDL-TSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF-EVIGDVRGKGLMIGVEIVKE 384 (457)
T ss_pred HHHhh-cCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhC-CCEEeeccceeEEEEEEecC
Confidence 99883 33345678999999999999999999988999999999999999999987776 48889999999999988432
Q ss_pred CC---chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 294 AL---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 294 ~~---~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.. ......+.+.|+++|+++.+.+ .+.+|+.|++.+|++|+++++++|+++++ .+.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~-~~~ 445 (457)
T PRK05639 385 NGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIK-DAL 445 (457)
T ss_pred CCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHH
Confidence 11 1235678899999999998754 58999999999999999999999999998 654
No 51
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-43 Score=336.26 Aligned_cols=344 Identities=33% Similarity=0.532 Sum_probs=285.1
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+..+ .+.++...+++++|++.+. .++++|++|||+|++.|+++++.+. ..+| ..++.+|+.+++
T Consensus 54 ~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~-~~rg-~t~r~~ii~~~~ 131 (447)
T PRK06917 54 DAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHF-QERG-IQGKHKILSRWM 131 (447)
T ss_pred HHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHH-HhcC-CCCCCEEEEECC
Confidence 688899988765543 3668889999999999873 4689999999999999999998764 3344 345689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceecc--------C---------CCHHHHHHHHHhcC-CcEEEEEEccccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------F---------GDITALEKIFKESG-DQIAGFLFEPIQGE 140 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---------~d~~~le~~l~~~~-~~~~~vi~~~~~~~ 140 (374)
+|||.+..+.++++.......+.+...++..++ + ++++.+++.+++++ +++++|++||++++
T Consensus 132 ~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~ 211 (447)
T PRK06917 132 SYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGA 211 (447)
T ss_pred CcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccC
Confidence 999999998887776554444443322222211 1 13467788887654 57999999999885
Q ss_pred -CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 141 -AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 141 -~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
+|.+.++++++++|.++|++||+++|+||+++||||+|..++++++++.||++++||++++|++|+|++++++++++.+
T Consensus 212 ~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~ 291 (447)
T PRK06917 212 AGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPI 291 (447)
T ss_pred cCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHH
Confidence 5688899999999999999999999999999999999999999999999999999999999966999999999998887
Q ss_pred CCC----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC
Q 017259 220 QPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 295 (374)
Q Consensus 220 ~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 295 (374)
... .+++||++++++++++.++++.++++++.++++++.+++++.|+++..++| .+.++++.|.++.+++..+..
T Consensus 292 ~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ie~~~~~~ 370 (447)
T PRK06917 292 LRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQST-IIGDVRGKGLLIGVEFVADKK 370 (447)
T ss_pred hccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeecceEEEEEEeccCC
Confidence 532 356799999999999999999998889999999999999999999987774 888999999999999843210
Q ss_pred --------chhHHHHHHHHHHCCeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 --------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 --------~~~~~~~~~~l~~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
......+.+.|+++|+++.+.. ++.+|++|++.+|++|+++++++|.++++ ++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~ 438 (447)
T PRK06917 371 TKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVE-EM 438 (447)
T ss_pred cCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence 0135678899999999998752 57999999999999999999999999998 65
No 52
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-43 Score=337.24 Aligned_cols=343 Identities=27% Similarity=0.426 Sum_probs=280.5
Q ss_pred ChHHHHHHHhccccCcC--CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSSRA--FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|++++++++.+.+.. +.++...+++++|++..+ .++++|++||++|++.|+++++.++ ...| .+++.+|+.+
T Consensus 76 ~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~-~~~g-~~~r~~ii~~ 153 (460)
T PRK12403 76 AAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYW-QVLG-KPQKKIMIGR 153 (460)
T ss_pred HHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH-HhhC-CCCCcEEEEE
Confidence 36889999987765442 457889999999999875 6899999999999999999998764 2234 2334678888
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCC-----------------HHHHHHHHHh-cCCcEEEEEEcccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAGFLFEPIQ 138 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~-~~~~~~~vi~~~~~ 138 (374)
..+|||.+..+..+++...++. +.+..+++..+++++ .+++++.+.+ .++++++|++||++
T Consensus 154 ~~~yHG~t~~~~s~s~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~ 232 (460)
T PRK12403 154 WNGYHGSTLAATALGGMKFMHE-MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQ 232 (460)
T ss_pred CCCcCcccHhhhhcCCCccccc-cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 9999999999888876544332 233334444443221 3556666643 34689999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
+.+|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.
T Consensus 233 g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~ 312 (460)
T PRK12403 233 GAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEA 312 (460)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999996599999999998887
Q ss_pred cCC----CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 219 IQP----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 219 ~~~----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
+.. ..+++||+++++++++++++|+.++++++.++++ ++.+++++.|+++..++ +.+.++++.|.++.+++..+
T Consensus 313 ~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrG~Gl~~gie~~~~ 391 (460)
T PRK12403 313 LVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDH-PLVGEVQGAGLVAALQFAED 391 (460)
T ss_pred HhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcC-CCEEeEeecceEEEEEEccC
Confidence 743 1367899999999999999999998888999996 89999999999887777 48899999999999998432
Q ss_pred CC---c-----hhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 294 AL---P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 294 ~~---~-----~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.. . .....+.+.++++|+++.+.+ +.+|++|+++.|++|+++++++|+++++ ++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl~it~~eid~~~~~l~~al~-~~ 453 (460)
T PRK12403 392 KATRKRFANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPALVAGRAEIDELVDKTRIAVD-RT 453 (460)
T ss_pred ccccccccchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 11 0 113346677789999998763 5789999999999999999999999998 66
No 53
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-43 Score=334.07 Aligned_cols=338 Identities=30% Similarity=0.512 Sum_probs=283.7
Q ss_pred hHHHHHHHhccccCcC-CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSRA-FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.++++++.+..+. +.++...+++++|++..+ .++++|++|||+|++.|+++++.+. +|.+|+.+.+
T Consensus 64 ~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~t--------gr~~ii~~~~ 135 (443)
T PRK08360 64 KAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYT--------KRRKILSYLR 135 (443)
T ss_pred HHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhc--------CCCeEEEEeC
Confidence 6889999988776553 457788999999999873 3699999999999999999998763 3488999999
Q ss_pred CCCCcccccccccCCc-cccccCCCCCCCceeccCCC-----------------HHHHHHHHHh--cCCcEEEEEEcccc
Q 017259 79 CFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQIAGFLFEPIQ 138 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~--~~~~~~~vi~~~~~ 138 (374)
+|||.+..+.++++.. .++..+.+ ..++.++++++ ++.+++.++. .++++++++++|++
T Consensus 136 ~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~ 214 (443)
T PRK08360 136 SYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQ 214 (443)
T ss_pred CcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCcc
Confidence 9999998887776532 23344444 34455554432 3456666654 34689999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC 218 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~ 218 (374)
+++|.+.++++++++|.++|++||+++|+||+|+|++++|..++...+++.||++++||++++|+ |+|++++++++++.
T Consensus 215 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~-pigav~~~~~i~~~ 293 (443)
T PRK08360 215 GDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGL-PISATIGRAEIMDS 293 (443)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCc-eeEEEEEcHHHHhh
Confidence 99999998899999999999999999999999999999998777777789999999999999998 99999999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---
Q 017259 219 IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--- 295 (374)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 295 (374)
+....+..++++++++++++.++++.+.++++.++++++.+++++.|+++...+| .+.++++.|.++.+++.++..
T Consensus 294 ~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~gie~~~~~~~~~ 372 (443)
T PRK08360 294 LPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVDLVKDRETKE 372 (443)
T ss_pred hcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEEEecCCcccC
Confidence 8766678899999999999999999998889999999999999999999877664 788899999999998843210
Q ss_pred --chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCc
Q 017259 296 --PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 351 (374)
Q Consensus 296 --~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 351 (374)
......+.+.|+++|+++.+...+.+|++|++.+|++++++++++|.++++ .+.+
T Consensus 373 ~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~-~~~~ 429 (443)
T PRK08360 373 RAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE-DVEE 429 (443)
T ss_pred ccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence 113567889999999999876678999999999999999999999999998 7643
No 54
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.7e-43 Score=335.06 Aligned_cols=335 Identities=32% Similarity=0.535 Sum_probs=280.8
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc----CCC-eEEe-cCChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF----GYD-MVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~----~~~-~~~~-~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
+|+++++++..+... .+.++...+++++|++.. +.+ +++| ++||++|++.|+++++.+. | +.+|+
T Consensus 62 ~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii 133 (425)
T PRK09264 62 QALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVT----G----RTNIV 133 (425)
T ss_pred HHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEE
Confidence 688888887544433 345778889999999864 233 5656 5899999999999998762 2 47899
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCC--------CHHHHHHHHHhcC---CcEEEEEEccccCCCCc
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQGEAGV 143 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~l~~~~---~~~~~vi~~~~~~~~g~ 143 (374)
.+.++|||.+..+.++++.+.++..+.+...++..+|++ |++++++.+++++ +++++|++||+++.+|.
T Consensus 134 ~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~ 213 (425)
T PRK09264 134 AFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGI 213 (425)
T ss_pred EECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCC
Confidence 999999999999998887766666666655567777763 6788898887542 46999999999999999
Q ss_pred ccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccC-CccchhhheeCHHHHhhcCCC
Q 017259 144 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPG 222 (374)
Q Consensus 144 ~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~G~~~~~~~~~~~~~~~ 222 (374)
+.++++++++|.++|++||+++|+||+|+|||++|..+.++.+++.||++++||++++ |+ |+|++++++++ ..+...
T Consensus 214 ~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~-pigav~~~~~i-~~~~~~ 291 (425)
T PRK09264 214 NVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGL-PMALVLIKPEL-DVWKPG 291 (425)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCcc-ceEEEEEchhh-hccCCC
Confidence 8999999999999999999999999999999999998888888999999999999998 88 99999999887 456555
Q ss_pred CCCCCCCCCHHHHHHHHHHH-HHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHH
Q 017259 223 EHGSTFGGNPLASAVAIASL-DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 223 ~~~~~~~~~~~~~~aa~~al-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 301 (374)
.++.||++++++++++.+++ +.+.++++.++++++.++++++|+++...+|......++.|.++++.+++.. ....
T Consensus 292 ~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~---~~~~ 368 (425)
T PRK09264 292 EHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE---LAGK 368 (425)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH---HHHH
Confidence 67789999999999999999 6666668999999999999999998876654334667888999999986543 5678
Q ss_pred HHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 302 ICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
+++.|.++||++.+.. .+.||++|++.++++++++++++|+++++ .+.
T Consensus 369 l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~-~~~ 418 (425)
T PRK09264 369 IAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVA-EVL 418 (425)
T ss_pred HHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999999999998753 47999999999999999999999999998 653
No 55
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-43 Score=335.52 Aligned_cols=334 Identities=31% Similarity=0.502 Sum_probs=278.9
Q ss_pred hHHHHHHHhcccc-CcCCCCCcHHHHHHHHhcccC-C----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEE
Q 017259 2 KALQEQAEKLTLS-SRAFYNDKFPVFAERLTSMFG-Y----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS 75 (374)
Q Consensus 2 ~a~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-~----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~ 75 (374)
+|+++++.++.+. ...+.++...+++++|++..+ . ..+++++|||+|++.|+++++.+. | |.+|+.
T Consensus 81 ~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~t----g----r~~Ii~ 152 (459)
T PRK06931 81 QSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYT----G----RSNVIS 152 (459)
T ss_pred HHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhc----C----CCeEEE
Confidence 6788888764432 223568888999999999873 2 234667999999999999998763 3 488999
Q ss_pred eccCCCCcccccccccCCccccccCCCCCCCceeccCCC-------------HHHH----HHHHHh---cCCcEEEEEEc
Q 017259 76 CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-------------ITAL----EKIFKE---SGDQIAGFLFE 135 (374)
Q Consensus 76 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------~~~l----e~~l~~---~~~~~~~vi~~ 135 (374)
+.++|||.+..+.++++.+.++..+.|..+++..+++++ .+.+ ++.+.+ .+++++++|+|
T Consensus 153 ~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~E 232 (459)
T PRK06931 153 FSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILE 232 (459)
T ss_pred ECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEc
Confidence 999999999999988877766666666666666666543 2323 333332 23569999999
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHH
Q 017259 136 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 136 ~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
|+++++|.+.++++++++|.++|++||+++|+||+++||||+|..|+++++++.||+++++|+++||+ |+|.++.++++
T Consensus 233 Piqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~-Pi~av~~~~~~ 311 (459)
T PRK06931 233 AIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGL-PLAVLGIKKEF 311 (459)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCc-ceeeeeeHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 99998887764
Q ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC
Q 017259 216 MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 295 (374)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 295 (374)
+.+.+..+++||++|+++++++++.|+.++++++.++.++..+++++.|+++..++| .+.++++.|.++.+++.++..
T Consensus 312 -~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Glm~giel~~~~~ 389 (459)
T PRK06931 312 -DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIGIEIVDERQ 389 (459)
T ss_pred -hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEeEecCceEEEEEEccCcc
Confidence 666666788999999999999999999998889999999999999999999987774 888999999999999843210
Q ss_pred -----------chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 296 -----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 -----------~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
......+...|+++|+++.+.+ ++.+|+.|++.+|++|+++++++|.+++.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 390 PADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALL 453 (459)
T ss_pred cccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence 1124568888999999997653 68999999999999999999999999987
No 56
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.7e-43 Score=331.97 Aligned_cols=341 Identities=59% Similarity=0.988 Sum_probs=288.3
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+.+..+..+.+.+++++|+++++.+.+++++||++|++.|+++++.++..++|...+++.|+.++.+||
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yh 139 (401)
T TIGR01885 60 KALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFH 139 (401)
T ss_pred HHHHHHHHhccccccccCCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcC
Confidence 67778887766655545688899999999999998999999999999999999998775333343445689999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+.....+++.+.....+.+...++..++++|++++++.+++++++++++++||+++++|.+.++++++++|.++|++|
T Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~ 219 (401)
T TIGR01885 140 GRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH 219 (401)
T ss_pred cccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 99888888876655554455544567788999999999999876678999999999999999998899999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCC-ccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
|+++|+||+|+|++++|..+..+..++.||++++||++++| + |+|++++++++++.+....+..++++++++++++.+
T Consensus 220 ~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a 298 (401)
T TIGR01885 220 NVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVA 298 (401)
T ss_pred CCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999877766678899999999999976 6 999999999999888765567788999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCE
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 320 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 320 (374)
+++.+.++++.++.+.+.+++++.|+++. . +.+...++.|.++.+.+++...+....++++.|.++||.+.+...+.
T Consensus 299 ~L~~i~~~~l~~~~~~~~~~~~~~L~~l~--~-~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~ 375 (401)
T TIGR01885 299 ALEVLEEEKLAENAEKLGEIFRDQLKKLP--K-PIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTHGNI 375 (401)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHhcc--C-CceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecCCCE
Confidence 99999877888899999999999998873 1 35556678899999877543211246789999999999999987889
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 321 VRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+||+|++.++++++++++++|+++++
T Consensus 376 lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 376 IRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999998763
No 57
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=312.40 Aligned_cols=339 Identities=35% Similarity=0.550 Sum_probs=294.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.+++.++.|.++.+.+....++++.|.+.. +.++++|++|||+|++.||+++++.. ..+++.+...+|.+++
T Consensus 79 ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~--~~~~~~~~t~~Iaf~n 156 (433)
T KOG1401|consen 79 RALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFT--GKKHPEKKTKFIAFEN 156 (433)
T ss_pred HHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhh--cccCCccceeEEEEec
Confidence 688999999999998777777889999999987 78899999999999999999998764 2232343467999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC 158 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~ 158 (374)
+|||.+.+++..++++.+...+.|..+++...+++|+.++++.++.+...++++|+||+++.+|.++.+++++..|.++|
T Consensus 157 syHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C 236 (433)
T KOG1401|consen 157 SYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKEC 236 (433)
T ss_pred CcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 99999999999999999999999988999999999999999999998888999999999999999999999999999999
Q ss_pred HhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC---CCCCCCCHHHH
Q 017259 159 SKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---GSTFGGNPLAS 235 (374)
Q Consensus 159 ~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 235 (374)
+++|+++|.||+++||+|.|..++.++++..||+.+++|.++||+ |+|+.++++++++.+.+..+ +.||++|++++
T Consensus 237 ~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGl-PigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLac 315 (433)
T KOG1401|consen 237 DDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGL-PIGATGVRDKVAEMISPGDHLYHGGTFSGNPLAC 315 (433)
T ss_pred hhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCc-eeEEEeehHHHHhhcCCCCccccCcccCCChhhh
Confidence 999999999999999999999999999999999999999999998 99999999999999988765 99999999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 236 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 236 ~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
.++..+++++.+.++.+++.+..+.+++.+.+...+.+.......++++++++.+... ..++.+...+.|.++.+
T Consensus 316 sa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p-----~~~~~d~~~~~~ll~~~ 390 (433)
T KOG1401|consen 316 SAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGP-----VYKFADAAREQGLLILT 390 (433)
T ss_pred hHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeec-----hhhhhhhhhhhhHHHHH
Confidence 9999999999999999999999999999999988776545555578899998877543 34555555555555544
Q ss_pred CCC----CEEEEec--CC--CCCHHHHHHHHHHHHHHHhccC
Q 017259 316 THD----TIVRLTP--PL--SISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 316 ~~~----~~lRi~~--~~--~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
... ..+||.| .. .+++|.++++++.+.+.+. .+
T Consensus 391 ~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~-~~ 431 (433)
T KOG1401|consen 391 LGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLS-AL 431 (433)
T ss_pred HhcccccceEEEeccccccccCcHHHHHHHHHHHHHHHH-Hh
Confidence 322 3467776 22 3458899999999998887 54
No 58
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-43 Score=331.93 Aligned_cols=327 Identities=38% Similarity=0.602 Sum_probs=281.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.+++++..+....+.++...+++++|++.++. +++++++||++|++.|+++++.+ | +++|+..++
T Consensus 66 ~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~-----g----~~~ii~~~~ 136 (398)
T PRK03244 66 EAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT-----G----RTKIVAAEG 136 (398)
T ss_pred HHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH-----C----CCeEEEECC
Confidence 57778888765544556778888999999998753 58999999999999999998642 2 378888899
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC 158 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~ 158 (374)
+|||.+..+..+++.......+.+...++..++++|++++++.+. +++++++++|++|++|.+.++++++++|.++|
T Consensus 137 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~ 213 (398)
T PRK03244 137 GFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREIT 213 (398)
T ss_pred CcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHH
Confidence 999999888877765555555555556677888889999999885 57999999999999999999999999999999
Q ss_pred HhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHH
Q 017259 159 SKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVA 238 (374)
Q Consensus 159 ~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 238 (374)
++||+++|+||+|+||++.|..+.+..+++.||+++|||++++|+ |+|++++++++++.+....+..+|+.++++++++
T Consensus 214 ~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa 292 (398)
T PRK03244 214 DRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGGL-PIGACLAFGPAADLLTPGLHGSTFGGNPVACAAA 292 (398)
T ss_pred HHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCCc-ccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999988777777788999999999999998 9999999999999888766788999999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCC
Q 017259 239 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD 318 (374)
Q Consensus 239 ~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 318 (374)
.++++.+.++++.++++++++++++.|+++. + +.+...++.|.++++.++.. ....+.+.|.++||++++...
T Consensus 293 ~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~v~g~g~~~~i~~~~~----~~~~~~~~l~~~Gv~~~~~~~ 365 (398)
T PRK03244 293 LAVLDTIASEGLLENAERLGEQLRAGIEALG--H-PLVDHVRGRGLLLGIVLTAP----VAKAVEAAAREAGFLVNAVAP 365 (398)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHhcC--C-CceeeEeeccEEEEEEEecc----HHHHHHHHHHHCCeEEeecCC
Confidence 9999988777899999999999999998763 3 24556777899999998643 577899999999999998767
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+.+|++|++.++++|+++++++|+++++ ++
T Consensus 366 ~~iR~~p~~~~t~~~i~~~~~~l~~~l~-~~ 395 (398)
T PRK03244 366 DVIRLAPPLIITDAQVDAFVAALPAILD-AA 395 (398)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHH-hc
Confidence 9999999999999999999999999998 54
No 59
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-42 Score=329.78 Aligned_cols=333 Identities=37% Similarity=0.662 Sum_probs=279.5
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+.++++++.+... .+.++...+|+++|++..+ .++++|++|||+|++.|+++++.+. | +++|+.+.
T Consensus 77 ~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~t----g----r~~Ii~~~ 148 (441)
T PRK05769 77 KAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHT----G----RKYIIAFL 148 (441)
T ss_pred HHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHh----C----CCeEEEEC
Confidence 688899988777554 3568888999999999773 5799999999999999999999763 2 48899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCCC------------------HHHHHH-HHHh--cCCcEEEEEEc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD------------------ITALEK-IFKE--SGDQIAGFLFE 135 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d------------------~~~le~-~l~~--~~~~~~~vi~~ 135 (374)
++|||.+..+.++++. +..+..+.|...++..+++++ ++.+++ .+++ .++++++|++|
T Consensus 149 ~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~E 228 (441)
T PRK05769 149 GAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVE 228 (441)
T ss_pred CCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEEC
Confidence 9999999988877653 334555656555555555421 233555 3332 34689999999
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHH
Q 017259 136 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 136 ~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
|+++.+|.+.++++++++|.++|++||+++|+||+++|++++|..+++..+++.||++++||++++|+ |+|++++++++
T Consensus 229 pv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~-p~gav~~~~~i 307 (441)
T PRK05769 229 PIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGL-PLGAVIGRAEL 307 (441)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCc-ccEEEEEehhh
Confidence 99999999999999999999999999999999999999999999888888899999999999999998 99999999988
Q ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC
Q 017259 216 MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 295 (374)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 295 (374)
++.+ ...++.||++++++++++.++++.+++ ++.++++++.+++++.|+++..++| .+..+++.|.++.+.+.+...
T Consensus 308 ~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~~ 384 (441)
T PRK05769 308 MFLP-PGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYE-FIGDVRGLGLMIGVELVKDRK 384 (441)
T ss_pred hhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeecceEEEEEEeccCCc
Confidence 7543 345788999999999999999999988 9999999999999999999887764 777889999999998843210
Q ss_pred ---chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 296 ---PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 ---~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
......+.+.|+++||++.+.+.+.+|++|++.+|++|+++++++|+++++
T Consensus 385 ~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 438 (441)
T PRK05769 385 EPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIK 438 (441)
T ss_pred cccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 113567888899999999887678999999999999999999999999987
No 60
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=7.9e-43 Score=330.15 Aligned_cols=337 Identities=50% Similarity=0.813 Sum_probs=285.6
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+.++...++...+++++|+++.+.+++++++||++|++.|+++++.++....|.+.++++|+++..+||
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~H 143 (401)
T PRK00854 64 AAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFH 143 (401)
T ss_pred HHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcC
Confidence 67888888877665555678889999999999988999999999999999999998764333354455689999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+.....++..+..+..+.+...++..++++|++++++.+. +++++|++++++|++|.+.++++++++|.++|++|
T Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~ 220 (401)
T PRK00854 144 GRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN 220 (401)
T ss_pred CccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 998887777766666555666667788889999999999886 57999999999999999998899999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+++.|..+.....++.||++++||++++|+.|+|++++++++++.+....+..+|+++++.++++.++
T Consensus 221 gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~ 300 (401)
T PRK00854 221 NVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAA 300 (401)
T ss_pred CCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999998888766656678889999999999987449999999999999887666777888999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
|+.+.++++.++++++.+++.+.|+++.. ..+...++.|.++.+.+.... ....++++.|.++||.+.+...+++
T Consensus 301 L~~l~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~g~g~~~~i~~~~~~--~~~~~~~~~L~~~GV~v~~~~~~~l 375 (401)
T PRK00854 301 LKVLTEEGMIENAAEMGAYFLEGLRSIRS---NIVREVRGRGLMLAVELEPEA--GGARQYCEALKERGLLAKDTHDHTI 375 (401)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHhhcc---CceEEEeccceEEEEEEecCc--hhHHHHHHHHHHCCeEEecCCCCEE
Confidence 99887777899999999999999988632 233455677888887763321 1567899999999999988767899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|++|++.++++++++++++|++++.
T Consensus 376 R~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 376 RLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998764
No 61
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=326.08 Aligned_cols=326 Identities=38% Similarity=0.619 Sum_probs=280.2
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.+++++..+.++.+..+...+++++|.+..+.+.+++++||++|++.|+++++.+ .| +++|++++++||
T Consensus 52 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~----~g----~~~vi~~~~~~H 123 (377)
T PRK02936 52 KAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKH----TG----KSKIVTFEQSFH 123 (377)
T ss_pred HHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHh----cC----CCeEEEECCCcC
Confidence 6788888876555555667888899999998877789999999999999999988643 23 378999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+.....+++...+..++.+...++..++++|++++++.+. +++++++++|+++++|...++++++++|.++|++|
T Consensus 124 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~ 200 (377)
T PRK02936 124 GRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKF 200 (377)
T ss_pred CCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence 999888877766555666666666777888899999999886 57999999999999998888999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+|+++.|..+....+++.||++++||++++|+ |+|++++++++.+.+....+..++++++++++++.++
T Consensus 201 ~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~-~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~ 279 (377)
T PRK02936 201 GALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNGI-PVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEV 279 (377)
T ss_pred CCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCCC-ccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999887766666788899999999999998 9999999999999988766778889999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+..+++.++++++.+++++.|++....++ .+...++.|.++++.+++ ....+.+.|.++||++.+.+.+++
T Consensus 280 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~-----~~~~~~~~l~~~gv~v~~~g~~~l 353 (377)
T PRK02936 280 LQVIKQPSFLEEVQEKGEYFLQKLQEELEHLE-CVKNIRGKGLMIGIECTE-----EVAPVIEQLREEGLLVLSAGPNVI 353 (377)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-cEEeEeecceEEEEEecc-----hHHHHHHHHHHCCeEEecCCCCEE
Confidence 99886668899999999999999998654453 555566788899988864 367899999999999999877899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 017259 322 RLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
||+|++..+++++++++++|++++
T Consensus 354 Ri~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 354 RLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEECCcccCHHHHHHHHHHHHHhC
Confidence 999999999999999999998763
No 62
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=1.6e-42 Score=330.81 Aligned_cols=337 Identities=34% Similarity=0.621 Sum_probs=279.5
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC--C-CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG--Y-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~-~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|++++++++.+... .+.++...+++++|++..+ . ++++|++|||+|++.|+++++.+. | +.+|+.+.
T Consensus 77 ~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~ 148 (451)
T PRK06918 77 EALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYT----K----RQGIISFS 148 (451)
T ss_pred HHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHh----C----CCcEEEEC
Confidence 688899988776543 3567889999999999873 2 699999999999999999998763 2 47899999
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCCC-----------------HHHHHHHHHh--cCCcEEEEEEccc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQIAGFLFEPI 137 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~l~~--~~~~~~~vi~~~~ 137 (374)
++|||.+..+.++++. ..++..+.|..+++..+|+++ ++.+++.+.+ .+++++++++||+
T Consensus 149 ~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi 228 (451)
T PRK06918 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPV 228 (451)
T ss_pred CCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcc
Confidence 9999999998887664 334555555555555554431 1234444432 3468999999999
Q ss_pred cCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 138 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 138 ~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
++.+|.++++++++++|.++|++||+++|+||+|+||+++|..+++..+++.||++++||++++|+ |+||+++++++++
T Consensus 229 ~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~-pig~v~~~~~i~~ 307 (451)
T PRK06918 229 QGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGV-PISGVIGRKEIMD 307 (451)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCC-ccEEEEEcHHHHh
Confidence 999999999999999999999999999999999999999998777777888899999999999998 9999999999999
Q ss_pred hcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC---
Q 017259 218 CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--- 294 (374)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--- 294 (374)
.+....+..||++++++++++.++++.+.++++.+++++.++++.++|+++...+| .+..+++.|.++.+.+..+.
T Consensus 308 ~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~~~~~~~~~ 386 (451)
T PRK06918 308 ESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQDRKTK 386 (451)
T ss_pred ccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEEEccCCCcC
Confidence 88777788899999999999999999998888999999999999999999876653 66777888999888773211
Q ss_pred --CchhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 295 --LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 295 --~~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.......+.+.|.++||.+.+.+ ++++||+|++..+++++++++++|+++++ .+
T Consensus 387 ~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~-~~ 444 (451)
T PRK06918 387 EPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQ-AC 444 (451)
T ss_pred CCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence 01235678888899999998864 48999999999999999999999999998 54
No 63
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=3.1e-42 Score=326.18 Aligned_cols=344 Identities=54% Similarity=0.946 Sum_probs=288.0
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.+.+..+..+...++++.++++.+.+.++|++||++|++.|+++++.++...+|.+.++++|++++.+||
T Consensus 54 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~H 133 (400)
T PTZ00125 54 AALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFS 133 (400)
T ss_pred HHHHHHHHhcccccccccCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcC
Confidence 67788887776655545567888899999998888999999999999999999998654344454445589999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+......++...+...+.+...++..++++|++++++.++ .+++++|+++|+++++|.+.++++++++|.++|++|
T Consensus 134 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 211 (400)
T PTZ00125 134 GRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKY 211 (400)
T ss_pred CccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 999888877765444444555555667778889999999986 257999999999999999998899999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+++++.|..+....+++.||++++||++++|+.|+|++++++++.+.+.......++++++++++++.++
T Consensus 212 ~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 291 (400)
T PTZ00125 212 NVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEA 291 (400)
T ss_pred CCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999888766666678899999999999977449999999999999887666677889999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+.++++.++.+++.+++++.|+++.... +.+...++.|.++++.++... .....++++.|.++||.+.+...+++
T Consensus 292 l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~Gv~v~~~~~~~l 369 (400)
T PTZ00125 292 LEVLKEEKLAENAQRLGEVFRDGLKELLKKS-PWVKEIRGKGLLNAIVFDHSD-GVNAWDLCLKLKENGLLAKPTHDNII 369 (400)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecccEEEEEEEccCc-chHHHHHHHHHHHCCeEEeecCCCEE
Confidence 9998777888999999999999998875443 355556778899998886421 12567899999999999999878999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
||+|++..+++++++++++|.++++ ++.
T Consensus 370 Ri~~~~~~~~~~i~~~l~~l~~~l~-~~~ 397 (400)
T PTZ00125 370 RFAPPLVITKEQLDQALEIIKKVLK-SFD 397 (400)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHH-HHh
Confidence 9999999999999999999999998 663
No 64
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-42 Score=326.96 Aligned_cols=332 Identities=44% Similarity=0.733 Sum_probs=283.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.+++++..+....++.+...+++++|++..+.+++++++||++|++.|+++++.++ ...+ .++++|+++.++||
T Consensus 62 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~-~~~~--~~~~~ii~~~~~yh 138 (396)
T PRK02627 62 EAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYG-HKKG--IEKPEIITAENSFH 138 (396)
T ss_pred HHHHHHHhhccccccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHh-cccC--CCCCeEEEECCCcC
Confidence 56777777765555557788999999999999999999999999999999999997654 1111 12378999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|.+.....+++...+...+.+...++..++++|++++++++. +++++++++|+++++|...++++++++|.++|++|
T Consensus 139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~ 215 (396)
T PRK02627 139 GRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDEN 215 (396)
T ss_pred cccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence 999888888776665555666656677788889999999885 58999999999998887777999999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|++||+||+|+|+++.|..++....++.||+++|||++++|+ |+||+++++++++.+....+..+++.++++++++.++
T Consensus 216 ~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~-rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~ 294 (396)
T PRK02627 216 GILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGV-PIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAV 294 (396)
T ss_pred CCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCCc-ccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999988887666666788899999999999998 9999999999999888766778899999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.+..+++.++++++.+++++.|+++...+| .+...++.|.++++.++. +..++++.|.++||.+.+.+.+++
T Consensus 295 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~~-----~~~~~~~~l~~~Gv~v~~~~~~~l 368 (396)
T PRK02627 295 IEIIEEEGLLENAAEVGEYLRAKLRELLEKYP-GIKEVRGLGLMIGIELDR-----PAAEIVKKALEKGLLINVTGDNVL 368 (396)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeccCcEEEEEEecC-----cHHHHHHHHHHCCeEEeecCCCEE
Confidence 99887778899999999999999988876553 455566778899988732 568899999999999999877899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
||+|++..+++++++++++|+++++
T Consensus 369 Ri~~~~~~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 369 RLLPPLIISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred EEECCcccCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987
No 65
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=4.7e-42 Score=340.98 Aligned_cols=342 Identities=24% Similarity=0.317 Sum_probs=273.3
Q ss_pred ChHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccC---CCeEEecCChHHHHHHHHHHHHH-cccccccCCC-------
Q 017259 1 MKALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFG---YDMVLPMNTGAEGVETALKLARK-WGYVKKKFSI------- 68 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~---~~~~~~~~~gs~a~~~al~~~~~-~~~~~~G~~~------- 68 (374)
++|+++|+.++.|..+ .+.++...+|+++|.+..+ .++++|++|||+|+|.||++++. +. ...|.+.
T Consensus 388 ~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~-~~~G~~~~~~~~~~ 466 (817)
T PLN02974 388 ARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFI-VDHGFLENSGNEKR 466 (817)
T ss_pred HHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHH-HhcCCCcccccccc
Confidence 3789999999888776 3678899999999999654 46899999999999999999964 43 3345331
Q ss_pred ----CccEEEEeccCCCCcccccccccCCccccccC-CCCCC-Ccee----------------ccCC--C----------
Q 017259 69 ----DEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF-GPLLP-GHLK----------------VDFG--D---------- 114 (374)
Q Consensus 69 ----~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----------------~~~~--d---------- 114 (374)
++.+||...++|||.+.+++.+++.+.+...+ .++.. ...+ ++.. +
T Consensus 467 ~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 546 (817)
T PLN02974 467 GGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWE 546 (817)
T ss_pred cccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccc
Confidence 46899999999999999999998865554432 22110 0000 0111 0
Q ss_pred -------------------HHHHHHHHHh-----cCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 115 -------------------ITALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 115 -------------------~~~le~~l~~-----~~~~~~~vi~~~~-~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
.+.+++.|++ .+++++++|+||+ ++.+|++.++++++++|.++|++||+++|+||
T Consensus 547 ~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DE 626 (817)
T PLN02974 547 SRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDE 626 (817)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEee
Confidence 2456777753 3468999999995 89999999999999999999999999999999
Q ss_pred cccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHH
Q 017259 170 IQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~ 243 (374)
+++||||+|..|+++++++.||+++++|+++||++|+|.+++++++++.+.. ..+++||+++++++++++++|+
T Consensus 627 V~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 627 VFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred cccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996699999999999998852 2478999999999999999999
Q ss_pred HHhhhcHHHHHHH----HHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----chhHHHHHHHHH-HCCeEe
Q 017259 244 VIRDEKLAERSAH----LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMK-ERGILA 313 (374)
Q Consensus 244 ~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gi~v 313 (374)
.++++++.+++.+ ..+++.+.|++....+ +.+.++++.|.++.+++.++.. ...+..+.+.++ ++|+++
T Consensus 707 ~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~-p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~ 785 (817)
T PLN02974 707 WYKDPSTNPNLIPPGSRLRELWDEELVRAISSL-PNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYA 785 (817)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEE
Confidence 9988755555444 4455555663333445 4888999999999999954321 012457888899 999999
Q ss_pred ccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 314 KPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 314 ~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
++. ++.+|+.||+..+++++++++++|.+.+
T Consensus 786 r~~-Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 786 RPL-GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred Eec-CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 997 4799999999999999999999998765
No 66
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=2.8e-41 Score=319.30 Aligned_cols=337 Identities=31% Similarity=0.507 Sum_probs=278.6
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|++++++++.+..+ ...++...+++++|++.+ +.++++|++||++|++.|+++++.+. ..+| .+++.+|+.+++
T Consensus 68 ~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~-~~~~-~~~r~~il~~~~ 145 (427)
T TIGR00508 68 AAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYW-QAKG-EKNRQKFLTIRS 145 (427)
T ss_pred HHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH-HhhC-CCCccEEEEEcC
Confidence 678888888765444 356788899999999987 45799999999999999999998764 2233 344689999999
Q ss_pred CCCCcccccccccCCc-cccccCCCCCCCceecc---------CC--CHHHHHHHHHhcCCcEEEEEEccc-cCCCCccc
Q 017259 79 CFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVD---------FG--DITALEKIFKESGDQIAGFLFEPI-QGEAGVII 145 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~--d~~~le~~l~~~~~~~~~vi~~~~-~~~~g~~~ 145 (374)
+|||.+..+..+++.. .++..+.+..+++..++ ++ |++++++.+.++++++++|++||+ ++.+|.+.
T Consensus 146 ~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~ 225 (427)
T TIGR00508 146 GYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRF 225 (427)
T ss_pred CcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCccc
Confidence 9999998888876642 22322332222222221 12 567888888776678999999997 88899999
Q ss_pred CChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC---
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG--- 222 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~--- 222 (374)
++++++++|.++|++||+++|+||+|+|+|++|..|..+++++.||++++||+++||+.+++.++.++++++.+...
T Consensus 226 ~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~ 305 (427)
T TIGR00508 226 YHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAG 305 (427)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999998888888999999999999999965899999999998888642
Q ss_pred --CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHH
Q 017259 223 --EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY 300 (374)
Q Consensus 223 --~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 300 (374)
.++.||.++++++++++++++.++++++.++++++.+++++.|+++.. . +.+...++.|.++.+.+.+.. ...
T Consensus 306 ~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-~-~~i~~vrg~G~~~~i~~~~~~---~~~ 380 (427)
T TIGR00508 306 CFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-N-PVVKDVRVLGAIGVVEMYKPV---NVE 380 (427)
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-C-CCEEeEeccccEEEEEECCcc---CHH
Confidence 266788999999999999999998889999999999999999998754 3 355677888999999886443 567
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.|+++||++.+. .+.+|++|++.+|++|+++++++|++++.
T Consensus 381 ~~~~~l~~~Gv~~~~~-~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 381 ELQKKFVEQGVWIRPF-GKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred HHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999876 46899999999999999999999999987
No 67
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-41 Score=320.46 Aligned_cols=338 Identities=28% Similarity=0.448 Sum_probs=269.0
Q ss_pred HHHHHHHhccc--cCc-CCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccc---cccCC-CCccE
Q 017259 3 ALQEQAEKLTL--SSR-AFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYV---KKKFS-IDEAI 72 (374)
Q Consensus 3 a~~~~~~~~~~--~~~-~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~---~~G~~-~~~~~ 72 (374)
|+.+++.++.+ ..+ .+.++...+++++|++.. +.++++|++||++|++.|+++++.|+.. .+|.+ .++.+
T Consensus 71 ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~k 150 (443)
T PRK08297 71 EFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTK 150 (443)
T ss_pred HHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCce
Confidence 88889987653 222 366788889999999876 3579999999999999999999877421 24531 34689
Q ss_pred EEEeccCCCCcccccccccCCccccccCCCCCC------Cceecc-------------CCCHHHHHHHHHhcCCcEEEEE
Q 017259 73 IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP------GHLKVD-------------FGDITALEKIFKESGDQIAGFL 133 (374)
Q Consensus 73 vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------------~~d~~~le~~l~~~~~~~~~vi 133 (374)
|+.+.++|||.+..+.++++.......+.+... .....+ .++++++++.+.++++++++++
T Consensus 151 ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI 230 (443)
T PRK08297 151 VLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFI 230 (443)
T ss_pred EEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 999999999999999888764322221111100 000111 1135666778877778999999
Q ss_pred EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCH
Q 017259 134 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK 213 (374)
Q Consensus 134 ~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~ 213 (374)
+||+++++|.+.++++++++|.++|++||+++|+||+++||+++|..++++++++.||+++++|+++ +|.++..+
T Consensus 231 ~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l~~~ 305 (443)
T PRK08297 231 AEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIMAGR 305 (443)
T ss_pred EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----ccceecch
Confidence 9999999999999999999999999999999999999999999999999999999999999999975 23334444
Q ss_pred HHHh----hcC-CCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEE
Q 017259 214 EVML----CIQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 288 (374)
Q Consensus 214 ~~~~----~~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~ 288 (374)
++.+ .+. ...++.||++++++++++.++++.++++++.+++++..+++++.|+++...+|....++++.|.++.+
T Consensus 306 ~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i 385 (443)
T PRK08297 306 RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAF 385 (443)
T ss_pred HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEE
Confidence 4322 121 23477899999999999999999998889999999999999999999887764233378899999999
Q ss_pred EeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 289 EFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++.+.. ....+++.|+++||++.+.+.+.+|++|++.++++|+++++++|.++++ ++
T Consensus 386 ~~~~~~---~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~-~~ 442 (443)
T PRK08297 386 DLPTTA---DRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALP-EV 442 (443)
T ss_pred EecCHH---HHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence 986532 4678999999999999987778999999999999999999999999987 54
No 68
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-41 Score=346.38 Aligned_cols=335 Identities=31% Similarity=0.447 Sum_probs=279.3
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
+|++++++++...+ .+.++...+++++|++.. +.+.++|++|||+|++.|+++++.+. | +.+||.+.++
T Consensus 645 ~Ai~~q~~~l~~~~-~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~t----G----r~~ii~~~~~ 715 (1013)
T PRK06148 645 AAAARQAARLNTNT-RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHT----G----QRDAIVLDHA 715 (1013)
T ss_pred HHHHHHHhhcCCcC-CcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEEcCC
Confidence 68889998874332 466888999999999987 35789999999999999999999763 3 4789999999
Q ss_pred CCCcccccccccCCccccccCCCC-CCCc--------eeccCC--C-------HHHHHHHHH---hcCCcEEEEEEcccc
Q 017259 80 FHGRTLAAISMSCDNEAIRGFGPL-LPGH--------LKVDFG--D-------ITALEKIFK---ESGDQIAGFLFEPIQ 138 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~--d-------~~~le~~l~---~~~~~~~~vi~~~~~ 138 (374)
|||.+..+.++++. .+...+.+. ...+ ...+++ + .+.+++.++ .+++.+++||+||++
T Consensus 716 YHG~t~~a~s~s~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~ 794 (1013)
T PRK06148 716 YHGTTTELIDLSPY-KFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIP 794 (1013)
T ss_pred ccCCCcchhhcCch-hhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCc
Confidence 99999998877652 222222211 1112 223443 2 145666554 244679999999999
Q ss_pred CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccccc-CcccccCCCCCcEEEecccccCCccchhhheeCHHHHh
Q 017259 139 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 139 ~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~ 217 (374)
+.+|.+.++++++++|.++|++||+++|+||+++||||+|. .|+++++++.||+++++|+++||+ |+|.+++++++++
T Consensus 795 g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~-Plgav~~~~ei~~ 873 (1013)
T PRK06148 795 SVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIAD 873 (1013)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCc-ceEEEEEcHHHHh
Confidence 99999999999999999999999999999999999999996 789999999999999999999998 9999999999999
Q ss_pred hcCCCC-CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-
Q 017259 218 CIQPGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 295 (374)
Q Consensus 218 ~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 295 (374)
.+.... +..||+++++++++++++++.++++++.++.+++++++++.|+++..++| .+.++++.|.++.+++..+..
T Consensus 874 ~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Gl~~gvel~~~~~~ 952 (1013)
T PRK06148 874 SFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD-IIGDVRGMGLFLGIELVTDRKT 952 (1013)
T ss_pred hccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CceEEeeeceEEEEEecCCccc
Confidence 887543 67899999999999999999999889999999999999999999988774 888999999999999853211
Q ss_pred ----chhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 ----PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 ----~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
......+.+.|+++||++.+.+ .+.+||.|++.+|++++++++++|++++. ++
T Consensus 953 ~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~-~~ 1011 (1013)
T PRK06148 953 KAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLA-AA 1011 (1013)
T ss_pred cCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence 1235678899999999998754 48999999999999999999999999997 53
No 69
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=7.4e-41 Score=302.23 Aligned_cols=332 Identities=27% Similarity=0.405 Sum_probs=275.5
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccC-CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|++++++++..+. .+++.-.++++.|.+..+ .+.+-|+||||||+..|++++|.++ +|++|+.++++|
T Consensus 76 ~Av~~~l~~G~~fg--~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~T--------gR~kIikF~G~Y 145 (432)
T COG0001 76 EAVQEQLERGLSFG--APTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYT--------GRDKIIKFEGCY 145 (432)
T ss_pred HHHHHHHHhcCCCC--CCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhh--------CCCeEEEEcCCC
Confidence 68889998886655 357778889999999885 4999999999999999999999875 459999999999
Q ss_pred CCcccccccccCCccc-------cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 81 HGRTLAAISMSCDNEA-------IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
||+....+.-.+...- .............+||||++.+++++++.++.+++|++||+.++-|.+.|.++++++
T Consensus 146 HG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~ 225 (432)
T COG0001 146 HGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEG 225 (432)
T ss_pred CCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHH
Confidence 9998877664332111 111111113477889999999999999998999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC---CCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGG 230 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~---~~~~~~~~ 230 (374)
|.++|++||++||+||+.+|| |.+...+...+++.||+.+++|.+|||+ |+|.+.+++++++.+.+. .+..|+++
T Consensus 226 Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p~g~vyqaGT~sg 303 (432)
T COG0001 226 LRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAPLGPVYQAGTLSG 303 (432)
T ss_pred HHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCCCCCccccCCCCC
Confidence 999999999999999999998 4555556788999999999999999999 999999999999987764 56789999
Q ss_pred CHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----------chhH
Q 017259 231 NPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSA 299 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~ 299 (374)
|+++++|+.++++.+.++ +.++++.+..+++++.|++..... ++.......+.++.+.+.+... ....
T Consensus 304 nplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~ 382 (432)
T COG0001 304 NPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERF 382 (432)
T ss_pred cHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHH
Confidence 999999999999999874 589999999999999999998775 4666677778888877754321 1224
Q ss_pred HHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 300 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 300 ~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+...|+++||++.|..-...=+| ..++++++++.+++++++++ .+
T Consensus 383 ~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~-~~ 429 (432)
T COG0001 383 AKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFK-EL 429 (432)
T ss_pred HHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHH-Hh
Confidence 4566789999999999863333444 67999999999999999988 54
No 70
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.4e-41 Score=317.03 Aligned_cols=329 Identities=27% Similarity=0.417 Sum_probs=272.1
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|++++++++.+.. .+++...+++++|.+.. +.++++|++|||+|++.|+++++.+. | +.+|+.++++|
T Consensus 76 ~ai~~q~~~~~~~~--~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~y 145 (428)
T PRK12389 76 KAITEAAENGVLYG--TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYT----G----RTKIIKFAGCY 145 (428)
T ss_pred HHHHHHHHhCCccC--CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCc
Confidence 68888988865532 56888899999999876 57899999999999999999998763 3 48899999999
Q ss_pred CCcccccccccCCcccc------ccCC-CCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 81 HGRTLAAISMSCDNEAI------RGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
||.+..+...++..... .++. +...++..++++|++.+++.+++++++++++++||+++.+|.+.++++++++
T Consensus 146 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 146 HGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred CCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 99998888776532221 1221 2224577788999999999998777789999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC---CCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGG 230 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---~~~~~~~~~ 230 (374)
|.++|++||+++|+||+++|| |++..++..++++.||+++++|+++||+ |+|.+++++++++.+.+ ..+++||++
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~-Pi~av~~~~~i~~~~~~~~~~~~~~T~~g 303 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGL-PIGAYGGRKDIMEQVAPLGPAYQAGTMAG 303 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCC-ceeEEeEHHHHHhhhccCCCcccccCCcc
Confidence 999999999999999999999 8877767778899999999999999998 99999999999988853 346789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeE-EEEeeeEEEEeccCCC----------chhH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL----------PVSA 299 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~----------~~~~ 299 (374)
|++++++++++|+.++++++.++++++.+++++.|+++..++| .+... +..| ++.+.+..... ....
T Consensus 304 npl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~ 381 (428)
T PRK12389 304 NPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHG-ITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAF 381 (428)
T ss_pred CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHH
Confidence 9999999999999998889999999999999999999877664 55444 5555 66666643211 0124
Q ss_pred HHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 300 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 300 ~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.+.|+++||++.+.+.+.+ .|++.++++|+++++++++++++
T Consensus 382 ~~~~~~l~~~Gv~~~~~~~~~~--~~~l~~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 382 GKFFKLMLNQGINLAPSKYEAW--FLTTAHTEEDIEETLEAVDRAFA 426 (428)
T ss_pred HHHHHHHHHCCcEeecCCCCCe--eecCCCCHHHHHHHHHHHHHHHH
Confidence 6788999999999988643333 46799999999999999999987
No 71
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=8e-41 Score=315.51 Aligned_cols=333 Identities=24% Similarity=0.339 Sum_probs=261.9
Q ss_pred hHHHHH--HHhccccCcCCCCCcHHHHHHHHhc----cc--CCCeEEecCChHHHHHHHHHHHHHccccc-cc-------
Q 017259 2 KALQEQ--AEKLTLSSRAFYNDKFPVFAERLTS----MF--GYDMVLPMNTGAEGVETALKLARKWGYVK-KK------- 65 (374)
Q Consensus 2 ~a~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~----~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~-~G------- 65 (374)
+|+.++ ...+.+..+ +.++...+++++|.+ .. +.++++|++||++|++.|+++++.++... ++
T Consensus 81 ~Ai~~q~~~~~l~~~~~-~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~ 159 (464)
T TIGR00699 81 KAAQSPEMATTLINRPA-LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSE 159 (464)
T ss_pred HHHHHHHHHHhhccccc-CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 567764 334444433 567778889999864 43 45799999999999999999998764111 11
Q ss_pred C---------CCC--ccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccC-------------------CCH
Q 017259 66 F---------SID--EAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------------------GDI 115 (374)
Q Consensus 66 ~---------~~~--~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~ 115 (374)
. ..+ +.+||.+.++|||.+..+.++++.+.+.....+. .++..+|+ +++
T Consensus 160 ~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~-~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l 238 (464)
T TIGR00699 160 EENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPA-FDWPQAPFPSLKYPLEEHVKENAKEEQRCL 238 (464)
T ss_pred ccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCC-CCceecCCCCcccccccccccchhHHHHHH
Confidence 0 012 2489999999999999998887754333221111 11122111 135
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCC--CcEE
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMV 193 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~--~d~~ 193 (374)
+.+++.++++++++++|++||+++.+|.+.++++++++|.++|++||+++|+||+++||+++|..|+++++++. ||++
T Consensus 239 ~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~ 318 (464)
T TIGR00699 239 EEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMV 318 (464)
T ss_pred HHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEE
Confidence 67888887766789999999999999999999999999999999999999999999999999999999999986 9999
Q ss_pred Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhC
Q 017259 194 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF 272 (374)
Q Consensus 194 s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (374)
++||+++ +|+ . +..+ .+.......++.||.+++++++++.++++.++++++.+++++..+++++.|+++...+
T Consensus 319 t~gK~lg~gG~-~----~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 392 (464)
T TIGR00699 319 TFSKKFQTAGY-F----FHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKY 392 (464)
T ss_pred EehhhhccCCc-c----ccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999996 575 2 2232 2222223457889999999999999999999888999999999999999999987776
Q ss_pred CCceeeEE--EEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 273 PNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 273 ~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
|..+.+++ +.|.++.+++++.. ....+.+.|+++|+++.+.+.+.+||.|++.++++|++.++++|.+++
T Consensus 393 ~~~i~~vRg~G~Glm~gie~~~~~---~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 393 PEFIQNLRGKGRGTFIAWDTPDEA---KRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CCceeeecccCeEEEEEEecCCHH---HHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 43677777 89999999986432 467899999999999988766899999999999999999999998763
No 72
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=2.3e-40 Score=314.99 Aligned_cols=334 Identities=47% Similarity=0.766 Sum_probs=279.7
Q ss_pred hHHHHHHHhccccCcC-CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSRA-FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.+++.++.+.... +.++...+++++|+++++ .+++++++||++|++.++++++.+ ..+ ++|+++++
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~---~~~-----~~ii~~~~ 130 (413)
T cd00610 59 EALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY---TGR-----KKIISFEG 130 (413)
T ss_pred HHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH---cCC-----CeEEEECC
Confidence 5677777766554432 357789999999999987 889999999999999999999753 223 89999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCC-----------CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP 147 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~ 147 (374)
+|||........++...+...+.+...++..++++ |++.+++.++++++++++++++|+++++|.+.++
T Consensus 131 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~ 210 (413)
T cd00610 131 AYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPP 210 (413)
T ss_pred CcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCC
Confidence 99999988887776554444555555567778887 8899999998665689999999999999998889
Q ss_pred hhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc--CCCCCC
Q 017259 148 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI--QPGEHG 225 (374)
Q Consensus 148 ~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~--~~~~~~ 225 (374)
++++++|.++|++||+++|+||+|+++++.|..+....+++.||++++||++++|+ |+|++++++++++.+ ......
T Consensus 211 ~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~-~~g~~~~~~~~~~~~~~~~~~~~ 289 (413)
T cd00610 211 PGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGL-PLGAVLGREEIMDAFPAGPGLHG 289 (413)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCcc-ccEEEEEcHHHHHhhccCCCCCC
Confidence 99999999999999999999999999988887667677788999999999999998 999999999998885 444566
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----chhHH
Q 017259 226 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAY 300 (374)
Q Consensus 226 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~ 300 (374)
.+++.++++++++.++++.+.++++.++++++.+++++.|+.+.... +.+...++.|.++++.+++... .....
T Consensus 290 ~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 368 (413)
T cd00610 290 GTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKH-PLVGDVRGRGLMIGIELVKDRATKPPDKELAA 368 (413)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CcEEEeecCceEEEEEEecCCCcCCcchHHHH
Confidence 78899999999999999998777889999999999999999886543 3555566788999988865310 02567
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
.+++.|.++||.+.+...+.+|+++++.++++++++++++|++++
T Consensus 369 ~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 369 KIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 899999999999999877899999999999999999999998753
No 73
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=8.4e-40 Score=310.53 Aligned_cols=330 Identities=24% Similarity=0.328 Sum_probs=261.5
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|++++++++.+.. .+++...+++++|++.. +.+++.|++|||+|++.|+++++.+. | +++|+.+.++|
T Consensus 122 ~av~~ql~~~~~~~--~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~t----g----r~~Ii~~~g~Y 191 (474)
T PLN02482 122 AALAETMKKGTSFG--APCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYT----G----REKIIKFEGCY 191 (474)
T ss_pred HHHHHHHhhCCCCC--CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhc----C----CCEEEEECCcc
Confidence 68889998876543 45778889999999977 67899999999999999999999763 3 48899999999
Q ss_pred CCcccccccc--cCCccccccCC-----CCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 81 HGRTLAAISM--SCDNEAIRGFG-----PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 81 hg~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
||.+...... ++......... +...++..++++|++++++.+++++++++++++||++++.|.+.|+++++++
T Consensus 192 HG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~ 271 (474)
T PLN02482 192 HGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEG 271 (474)
T ss_pred CCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHH
Confidence 9976443222 11111100001 1112456788899999999998777789999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC---CCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGG 230 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---~~~~~~~~~ 230 (374)
|.++|++||+++|+||+++|| +.|..++..++++.||+++++|+++||+ |+|.+++++++++.+.+ ..+..||++
T Consensus 272 lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~-Pigav~g~~ei~~~~~~~~~~~~~~T~~g 349 (474)
T PLN02482 272 LREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGL-PVGAYGGRREIMEMVAPAGPMYQAGTLSG 349 (474)
T ss_pred HHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCC-ceEEEEEcHHHHHhhccCCCcccccCcch
Confidence 999999999999999999999 8888878888899999999999999998 99999999999988863 346789999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----------chhHH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAY 300 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~ 300 (374)
+++++++++++|+.++++++.+++.++.+++++.|+++....+ ........+.++.+.+..+.. .....
T Consensus 350 npl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g-~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~ 428 (474)
T PLN02482 350 NPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAG-HEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFA 428 (474)
T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEcccceEEEEEEecCCccChhhhccCCHHHHH
Confidence 9999999999999998888999999999999999999876531 211111222355555532210 01245
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.|+++||++.+..... + .|++.+|++|+++++++++++++
T Consensus 429 ~~~~~l~~~Gv~~~~~~~~~-~-~psl~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 429 RFHRGMLEEGVYLAPSQFEA-G-FTSLAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred HHHHHHHHCCeEEeccCCCC-C-cCCCCCCHHHHHHHHHHHHHHHH
Confidence 78889999999998753221 1 37899999999999999999987
No 74
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=337.45 Aligned_cols=334 Identities=30% Similarity=0.485 Sum_probs=273.3
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
+|+.+++.++.+.+ .+..+...+++++|++.. +.+.++|++||++|++.|+++++.+. | +.+||.+..+
T Consensus 606 ~Ai~~q~~~l~~~~-~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~~ 676 (972)
T PRK06149 606 AAAARQWSLLNTNS-RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAAS----G----RRDVVSVLEA 676 (972)
T ss_pred HHHHHHHHhccccc-cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhc----C----CCeEEEEeCC
Confidence 67888888876543 345788899999999987 57899999999999999999998763 3 4789999999
Q ss_pred CCCcccccccccCCcccccc-CCCC--------CCCceeccCC--C-----HHHHHHHHH---hcCCcEEEEEEccccCC
Q 017259 80 FHGRTLAAISMSCDNEAIRG-FGPL--------LPGHLKVDFG--D-----ITALEKIFK---ESGDQIAGFLFEPIQGE 140 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~--d-----~~~le~~l~---~~~~~~~~vi~~~~~~~ 140 (374)
|||.+.++.++++....... +.+. .++....++. + .+++++.++ .+++++++||+||++++
T Consensus 677 yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~ 756 (972)
T PRK06149 677 YHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGN 756 (972)
T ss_pred CCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccC
Confidence 99999887665432110000 0000 0111122232 2 345555554 24578999999999999
Q ss_pred CCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccccc-CcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhc
Q 017259 141 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 141 ~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
+|.+.++++++++|.++|++||+++|+||+++|||++|. +++++++++.||+++++|++++|+ |+|++++++++++.+
T Consensus 757 gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~-Pl~av~~~~~i~~~~ 835 (972)
T PRK06149 757 AGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEAL 835 (972)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCe-eeEEEEEcHHHHhhh
Confidence 999999999999999999999999999999999999997 568888999999999999999998 999999999999888
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC----
Q 017259 220 QP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---- 294 (374)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 294 (374)
.. .....|+++|++++++++++|+.++++++.++.+++++++++.|+++..++| ++..+++.|.++.+++..+.
T Consensus 836 ~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Gl~~gvel~~~~~~~~ 914 (972)
T PRK06149 836 EAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHP-LIGAVHGMGLYLGVELVRDRQTLE 914 (972)
T ss_pred ccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeecceEEEEEEecCcccCC
Confidence 64 3345678999999999999999999889999999999999999999987774 88999999999999984321
Q ss_pred -CchhHHHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 295 -LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 295 -~~~~~~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.......+++.|+++||++.+.+ .+.+||.|++++++++++.++++|++++.
T Consensus 915 ~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~ 969 (972)
T PRK06149 915 PATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLT 969 (972)
T ss_pred CChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 01235679999999999998865 38999999999999999999999999987
No 75
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=7e-40 Score=311.74 Aligned_cols=330 Identities=26% Similarity=0.425 Sum_probs=266.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|++++++++.++. ++++...+++++|++.+ +.+++++++||++|++.|+++++.+. | +++|+.++++|
T Consensus 71 ~ai~~q~~~~~~~~--~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~----g----r~~ii~~~~~y 140 (423)
T TIGR00713 71 EAVKEALERGTSYG--APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYT----G----RDKIIKFEGCY 140 (423)
T ss_pred HHHHHHHHhCCcCC--CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEEcCCC
Confidence 67888888765432 45778899999999977 45799999999999999999998652 2 38999999999
Q ss_pred CCcccccccccCCc--cccccCCCC-----CCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 81 HGRTLAAISMSCDN--EAIRGFGPL-----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 81 hg~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
||.+.....+++.. .....+.+. ......++++|++++++.++++++++++++++|+++++|.+.++++++++
T Consensus 141 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~ 220 (423)
T TIGR00713 141 HGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAG 220 (423)
T ss_pred CCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 99876665543321 111111111 12356677789999999998766789999999999999988888999999
Q ss_pred HHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC---CCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGG 230 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---~~~~~~~~~ 230 (374)
|.++|++||+++|+||+|+|+ +.|..+....+++.||+++|||++++|+ |+|++++++++++.+.. ..+..||++
T Consensus 221 l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~-pig~v~~~~~i~~~~~~~~~~~~~~T~~~ 298 (423)
T TIGR00713 221 LRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGL-PVGAFGGRREIMERLAPEGPVYQAGTLSG 298 (423)
T ss_pred HHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCC-ceeeeeEHHHHHHhhCcCCCeeeccCCCC
Confidence 999999999999999999999 7776666667788999999999999998 99999999999998874 235678999
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----------chhHH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAY 300 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~ 300 (374)
++++++++.++++.++++++.+++++..+++++.|+++...+ +.+..+++.|.++.+.+..+.. .....
T Consensus 299 ~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~ 377 (423)
T TIGR00713 299 NPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFA 377 (423)
T ss_pred CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHH
Confidence 999999999999998877899999999999999999887766 4666677888888887743210 01234
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++.|+++||++.+...+.+|++++ .+++++++++++|.++++
T Consensus 378 ~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 378 KFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred HHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHh
Confidence 68889999999998765567899865 799999999999999987
No 76
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=1.4e-39 Score=306.05 Aligned_cols=330 Identities=40% Similarity=0.676 Sum_probs=272.2
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+++.+....+..++.+...+++++|+++++.+++++++||++|++.++++++.+. ..+| +++++|++++++||
T Consensus 50 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~-~~~~--~~~~~vi~~~~~yh 126 (379)
T TIGR00707 50 EALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYT-GDKG--KEKKKIIAFENSFH 126 (379)
T ss_pred HHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHh-hccC--CCCCeEEEECCCcC
Confidence 56677777665555556788899999999999999999999999999999999886432 1111 11399999999999
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|+...+...++...+...+.+...+...++++|++++++.+. +++++++++|+++++|...++.+++++|.++|++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~ 203 (379)
T TIGR00707 127 GRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDK 203 (379)
T ss_pred CccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHc
Confidence 998888777766555445556556677778889999999887 47899999999887887667899999999999999
Q ss_pred CCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
|+++|+||+|+++++.|..+.....+..+|+++|||++++|+ |+||+++++++++.+.......+++.++++++++.++
T Consensus 204 ~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aa 282 (379)
T TIGR00707 204 DALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAV 282 (379)
T ss_pred CCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCCc-ccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999987776545455677889999999999999 9999999999999998766677888999999999999
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 242 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
++.++..++.+++++++++++++|+++.... +. ...++.|.++++.+++ +..++.+.|.++||.+.+.+.+++
T Consensus 283 L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gv~v~~~~~~~l 355 (379)
T TIGR00707 283 LEVIEKERLLENVKEKGDYFKERLEELGKNY-PN-KEVRGKGLMLGIELEA-----PCKDIVKKALEKGLLVNCAGPKVL 355 (379)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhhC-CC-CccccCceEEEEEecC-----cHHHHHHHHHHCCcEEeeCCCCEE
Confidence 9988766788999999999999998875443 12 2344568888887764 357899999999999999877899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 017259 322 RLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
||++++..+++++++++++|++++
T Consensus 356 Ri~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 356 RFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEECCCcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999998753
No 77
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=1.6e-39 Score=307.88 Aligned_cols=334 Identities=26% Similarity=0.426 Sum_probs=263.4
Q ss_pred hHHHHHHHhcccc--C-cCCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccc---cccCCC-Ccc
Q 017259 2 KALQEQAEKLTLS--S-RAFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYV---KKKFSI-DEA 71 (374)
Q Consensus 2 ~a~~~~~~~~~~~--~-~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~---~~G~~~-~~~ 71 (374)
+|+.+++.++.+. + ..+..+...+++++|++.. +.++++|++||++|++.|+++++.|+.. .+|.+. ++.
T Consensus 63 ~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~ 142 (431)
T TIGR03251 63 LAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGT 142 (431)
T ss_pred HHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCc
Confidence 6888999887432 2 2355777888999998864 4679999999999999999999977411 124221 247
Q ss_pred EEEEeccCCCCcccccccccCCccccccCCCCCCC----c--eeccC-------------CCHHHHHHHHHhcCCcEEEE
Q 017259 72 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG----H--LKVDF-------------GDITALEKIFKESGDQIAGF 132 (374)
Q Consensus 72 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~-------------~d~~~le~~l~~~~~~~~~v 132 (374)
+|+.+.++|||.+..+.++++...++..+.|.... . ...++ ++++++++.+.+++++++++
T Consensus 143 ~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAav 222 (431)
T TIGR03251 143 QVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACF 222 (431)
T ss_pred eEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 89999999999999998887754444333222100 0 00111 23556677777677899999
Q ss_pred EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeC
Q 017259 133 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLAD 212 (374)
Q Consensus 133 i~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~ 212 (374)
++||+++++|.+.++++++++|.++|++||+++|+||+++||+++|..|+++.+++.||+++++|++. +|.++..
T Consensus 223 ivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~-----~~g~~~~ 297 (431)
T TIGR03251 223 IAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ-----VCGIMAG 297 (431)
T ss_pred EEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccCc-----cceEEec
Confidence 99999999999999999999999999999999999999999999999889899999999999999963 2233344
Q ss_pred HHH---Hhh-cC-CCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEE
Q 017259 213 KEV---MLC-IQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 287 (374)
Q Consensus 213 ~~~---~~~-~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 287 (374)
+++ ... +. ...+..||++++++++++.++++.+.++++.++++++.+++.+.|+++...++..+.+.++.|.++.
T Consensus 298 ~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~ 377 (431)
T TIGR03251 298 RRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCA 377 (431)
T ss_pred chHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEE
Confidence 332 221 11 2246788999999999999999999888899999999999999999987666447777888899999
Q ss_pred EEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 288 VEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+.+++.. ....+.+.|+++||++.+.+.+.+|++|++.++++|+++++++|.+
T Consensus 378 i~~~~~~---~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 378 FDLPSTA---DRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEeCCHH---HHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 9886532 4567999999999999887678999999999999999999999875
No 78
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=4.1e-39 Score=305.80 Aligned_cols=335 Identities=29% Similarity=0.532 Sum_probs=275.1
Q ss_pred hHHHHHHHhccccCcC-CCCCcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLTLSSRA-FYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+|+.++++++.+..+. ..++...+++++|++..+. ++++|++||++|++.|+++++.+. | +.+|+.++
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~----~----r~~iv~~~ 135 (425)
T PRK08088 64 AAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT----K----RSGVIAFT 135 (425)
T ss_pred HHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh----C----CCeEEEEC
Confidence 5788888877654432 4467788999999997642 589999999999999999998652 2 26788889
Q ss_pred cCCCCcccccccccCC-ccccccCCCCCCCceeccCC----C------HHHHHHHHHh--cCCcEEEEEEccccCCCCcc
Q 017259 78 GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG----D------ITALEKIFKE--SGDQIAGFLFEPIQGEAGVI 144 (374)
Q Consensus 78 ~~yhg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----d------~~~le~~l~~--~~~~~~~vi~~~~~~~~g~~ 144 (374)
++|||.+..+..+++. ..+..++.+...++..++++ + ++.+++.+++ ++++++++++||+++++|.+
T Consensus 136 ~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~ 215 (425)
T PRK08088 136 GAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFY 215 (425)
T ss_pred CccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCc
Confidence 9999999998887653 22344444333333333221 1 5568888863 35789999999999999999
Q ss_pred cCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC
Q 017259 145 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH 224 (374)
Q Consensus 145 ~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~ 224 (374)
.++++++++|.++|++||+++|+||+|+|+++.|..++++..+..||+.||||++++|+ |+||+++++++++.+.....
T Consensus 216 ~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~v~~~~~~~~~~~~~~~ 294 (425)
T PRK08088 216 AASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAIAPGGL 294 (425)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCC-cceeeEecHHHHhhcCCCCC
Confidence 99999999999999999999999999999988887767667788999999999999998 99999999999999988778
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC-----CchhH
Q 017259 225 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSA 299 (374)
Q Consensus 225 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~ 299 (374)
..++++++++++++.+.++.+..+++.+++++..+++++.|..+...+| .+..+++.|.++|+.+.++. .....
T Consensus 295 ~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~ 373 (425)
T PRK08088 295 GGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHSKPNAKLT 373 (425)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeccceEEEEEEecCCCCCCCCHHHH
Confidence 8899999999999999999988889999999999999999999887764 56667778999999984321 01246
Q ss_pred HHHHHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 300 YDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 300 ~~~~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.++.+.|.++||.+.+.. .+.+|++|++..+++++++++++|+++++
T Consensus 374 ~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~ 422 (425)
T PRK08088 374 AQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFD 422 (425)
T ss_pred HHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence 789999999999887653 58999999999999999999999999987
No 79
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.2e-39 Score=303.47 Aligned_cols=332 Identities=27% Similarity=0.426 Sum_probs=266.4
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
+|+.++++++... ..+++...+++++|.+..+ .++++|++||++|++.|+++++.+. | +.+|+.+.++
T Consensus 76 ~ai~~q~~~~~~~--~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~t----g----r~~ii~~~~~ 145 (433)
T PRK00615 76 DAIQQGAERGTSY--GLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGIT----G----RSIIIKFLGC 145 (433)
T ss_pred HHHHHHHHhCCCC--CCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhh----C----CCEEEEEcCc
Confidence 6788888876532 2557888999999999874 3699999999999999999998653 3 4789999999
Q ss_pred CCCcc---cccccccCCcc--ccccC--CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHH
Q 017259 80 FHGRT---LAAISMSCDNE--AIRGF--GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK 152 (374)
Q Consensus 80 yhg~~---~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~ 152 (374)
|||.+ ..+.+.++... ....+ .+.......++++|++++++.+.+++++++++++||++++.|.+.+++++++
T Consensus 146 yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~ 225 (433)
T PRK00615 146 YHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIE 225 (433)
T ss_pred cCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHH
Confidence 99987 44444443211 11111 1112234556788999999999876678999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC---CCCCCCC
Q 017259 153 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFG 229 (374)
Q Consensus 153 ~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~---~~~~~~~ 229 (374)
+|.++|++||+++|+||+++|+ |.|..++.+.+++.||++++||+++||+ |+|++++++++++.+... .+..||+
T Consensus 226 ~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~-p~~av~~~~~i~~~~~~~~~~~~~~T~~ 303 (433)
T PRK00615 226 GIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGL-PAAAVVAHKSIMDHLAPEGTIFQAGTLS 303 (433)
T ss_pred HHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCc-ceeeeeecHHHHhhhcCCCCcccCCCCc
Confidence 9999999999999999999999 8888888888899999999999999998 999999999999888532 3567899
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCc-eeeEEEEeeeEEEEeccCCC----------chh
Q 017259 230 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGRGLFNAVEFDKTAL----------PVS 298 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~----------~~~ 298 (374)
++++++++++++++.+++++++++++++.+++.++|+++.... +. +..++ .|.++.+.+.+... ...
T Consensus 304 g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~-g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~ 381 (433)
T PRK00615 304 GNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQ-GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEA 381 (433)
T ss_pred ccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHH
Confidence 9999999999999999888899999999999999999876553 22 44455 79999998854321 112
Q ss_pred HHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 299 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 299 ~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
...+.+.|.++||++.+...... .++..+|++|++++++++.++++ ++.
T Consensus 382 ~~~~~~~l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~-~~~ 430 (433)
T PRK00615 382 FQTFYQSAFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLE-KVF 430 (433)
T ss_pred HHHHHHHHHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHH-HHh
Confidence 44789999999999987532221 23367899999999999999998 654
No 80
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=5.6e-39 Score=300.97 Aligned_cols=323 Identities=32% Similarity=0.526 Sum_probs=266.0
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|+.+++.++....+.+..+...++++.|... .+ .++|++||++|++.|+++++.+. | +++|++.+++|
T Consensus 51 ~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~--~~~~~~~~~SGseA~~~Al~~ar~~~----~----~~~vv~~~~~y 120 (375)
T PRK04260 51 QALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD--KDYLAFFCNSGAEANEAAIKIARKAT----G----KQEIITFQNSF 120 (375)
T ss_pred HHHHHHHHhcCcccCccCCHHHHHHHHHHhcC--cCCEEEEcCccHHHHHHHHHHHHHhc----C----CCeEEEECCCc
Confidence 57777777655443344455666666666542 23 47999999999999999997542 2 37899999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
||.+..+...++.......+.+....+...+++|++++++.+. +++++++++|+++++|.+.++.+++++|.++|++
T Consensus 121 Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~ 197 (375)
T PRK04260 121 HGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQE 197 (375)
T ss_pred CcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHH
Confidence 9998887777665444444444333344445679999998885 5789999999999999998899999999999999
Q ss_pred cCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 161 YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
+|+++|+||+|+|+++.|..+....+++.||++||||++++|+ |+|++++++++.+.+.......++++++++++++.+
T Consensus 198 ~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a 276 (375)
T PRK04260 198 TGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANGV-PVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASA 276 (375)
T ss_pred cCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHH
Confidence 9999999999999988887666666788999999999999998 999999999999988876677889999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCE
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI 320 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 320 (374)
+++.+..+++.+++++..+++++.+.++.... +.+...++.|.++|+++.. +..++.+.|.++||.+.+.+.+.
T Consensus 277 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~Gi~v~~~~~~~ 350 (375)
T PRK04260 277 TLDIMLTAGFLEQALENGNYLQEQLQKALQDK-ETVTTVRGLGYMIGIETTA-----DLSQLVEAARDKGLIVLTAGTNV 350 (375)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhC-CCeeEEeccceEEEEEecC-----cHHHHHHHHHhCCCEEecCCCCE
Confidence 99998777889999999999999998887665 3455666789999998843 46789999999999999887789
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
+|++|+...+++++++++++|+++
T Consensus 351 lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 351 IRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEcCCCccCHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 81
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=6.4e-39 Score=304.21 Aligned_cols=328 Identities=24% Similarity=0.338 Sum_probs=264.9
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+|+.++++++.... .+++...+++++|++..+.+++.|++|||+|++.|+++++.+. | +++|+.++++||
T Consensus 98 ~Av~~q~~~~~~~~--~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~T----G----r~~ii~~~g~YH 167 (453)
T PRK07046 98 RALAEQARRGLTTM--LPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVT----G----RPKILVFNGCYH 167 (453)
T ss_pred HHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhh----C----CCEEEEECCCCC
Confidence 68888888876533 4578888999999998888999999999999999999999763 3 489999999999
Q ss_pred Ccccccccc--cCCccccccCCC----CCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 82 GRTLAAISM--SCDNEAIRGFGP----LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 82 g~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
|.+...... .+.+.....+.+ ....+..++++|++.+++.+. ++++++|++||++++.|.+.++++++++|.
T Consensus 168 G~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr 245 (453)
T PRK07046 168 GTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALR 245 (453)
T ss_pred CCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHH
Confidence 986544332 222212212211 123467788999999999885 357999999999999999999999999999
Q ss_pred HHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC---------CCCCC
Q 017259 156 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---------GEHGS 226 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---------~~~~~ 226 (374)
++|++||+++|+||+++ | +.|.......+++.||+++++|+++||+ |+|.+++++++++.+.+ ..++.
T Consensus 246 ~lc~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~-Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~ 322 (453)
T PRK07046 246 ELTRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGV-PCAVYGFSAELAERAQAAKASAPPGHSGIGT 322 (453)
T ss_pred HHHHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCC-cceeeeehHHHHHHHhhccccCCCCCceeCC
Confidence 99999999999999998 4 2333334456789999999999999998 99999999999888752 13567
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----------
Q 017259 227 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------- 295 (374)
Q Consensus 227 ~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------- 295 (374)
||+++++++++++++|+.+.++++.+++.+..+++++.|+++..++ +++..+.+.|.++.+.+.+...
T Consensus 323 T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~ 401 (453)
T PRK07046 323 TLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARH-GLPWHVTRVGARVEFQFAPTPPRNGAEAAAALD 401 (453)
T ss_pred CCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccC
Confidence 9999999999999999999888899999999999999999987766 4677788889988887632210
Q ss_pred chhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 ~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
......+...|+++||++.+. .+.++++|+ ++++|+++++++++++++ ++
T Consensus 402 ~~~~~~~~~~~~~~Gv~~~~~-~~~~~~~p~--~t~~did~~~~~~~~~l~-~~ 451 (453)
T PRK07046 402 PELEAALHLYLLNRGVLITPF-HNMMLVCPA--TTAADVDRLVAAFDACLG-EL 451 (453)
T ss_pred HHHHHHHHHHHHHCCCEEecc-cCcEEEeCC--CCHHHHHHHHHHHHHHHH-HH
Confidence 012346778889999999885 467888864 899999999999999987 54
No 82
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=3.5e-40 Score=303.05 Aligned_cols=286 Identities=45% Similarity=0.781 Sum_probs=252.3
Q ss_pred hHHHHHHHhccccC-cCCCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+++++.++.+.. +.+.++...+++++|.+.. +.++++|++||++|++.|+++++.+. ..++ ..++.+|+.+++
T Consensus 39 ~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~-~~~~-~~~r~~il~~~~ 116 (339)
T PF00202_consen 39 EAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYH-NKRA-YTGRRKILAFEG 116 (339)
T ss_dssp HHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHH-HHTH-HHTTTEEEEETT
T ss_pred hhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccc-cccc-ccCCceEEEeee
Confidence 67888888887766 4577888999999999988 67899999999999999999998443 2222 345689999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHH----------HHHHHH-hcCCcEEEEEEccccCCCCcccCC
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA----------LEKIFK-ESGDQIAGFLFEPIQGEAGVIIPP 147 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----------le~~l~-~~~~~~~~vi~~~~~~~~g~~~~~ 147 (374)
+|||.+..+.++++.+.++..+.+....+..+|++++.. +++.+. .++++++++++||+++.+|.+.++
T Consensus 117 ~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~ 196 (339)
T PF00202_consen 117 SYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPP 196 (339)
T ss_dssp TB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-
T ss_pred eeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccc
Confidence 999999999999888888888888888888899988766 444443 345789999999999999999999
Q ss_pred hhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCC
Q 017259 148 DGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 227 (374)
Q Consensus 148 ~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~ 227 (374)
++++++|.++|++||+++|+||+++|++|+|..|+++.+++.||+++++|++++|+ |+|.++.++++++.+.+..+++|
T Consensus 197 ~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~-p~sav~~~~~i~~~~~~~~~~~T 275 (339)
T PF00202_consen 197 PEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGL-PISAVLGSEEIMEAFQPGSHGST 275 (339)
T ss_dssp TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTS-SEEEEEEEHHHHTTSCTTSSTCT
T ss_pred cchhhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhh-hcccccccchhhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999996 99999999999999988889999
Q ss_pred CCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEec
Q 017259 228 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 291 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 291 (374)
|.+++++++++.+.++.++++++.+++++..+++++.|+++...+ +.+..+++.|.++.+++.
T Consensus 276 ~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 276 FGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARY-PLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp TTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEETTEEEEEES
T ss_pred cccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEeeeCeEEEEEEE
Confidence 999999999999999999999999999999999999999998887 589999999999999875
No 83
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.5e-39 Score=303.27 Aligned_cols=332 Identities=26% Similarity=0.416 Sum_probs=270.5
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|+.++++++.. ..+..+...+|+++|++.. +.+++++++||++|++.|+++++.+. | +++|+.++++|
T Consensus 73 ~a~~~~~~~~~~--~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~----g----~~~ii~~~~~y 142 (426)
T PRK00062 73 EAVIEAAEKGLS--FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCY 142 (426)
T ss_pred HHHHHHHHhCCc--CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHh----C----CCeEEEEcCcc
Confidence 678888877442 2356778889999999876 67899999999999999999998652 2 38899999999
Q ss_pred CCcccccccccCCccc--cccCCC-----CCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 81 HGRTLAAISMSCDNEA--IRGFGP-----LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
||.+..+...++.... ...+.+ .......++++|++++++.+.+++++++++++||+++++|.+.++++++++
T Consensus 143 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~ 222 (426)
T PRK00062 143 HGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEG 222 (426)
T ss_pred CCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHH
Confidence 9998666555332111 111111 112345667789999999998766789999999999999999989999999
Q ss_pred HHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCC---CCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---GEHGSTFGG 230 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~---~~~~~~~~~ 230 (374)
|.++|++||+++|+||+|+|+ +.|..+..+.+++.||++++||++++|+ |+|++++++++++.+.. ..+..|+++
T Consensus 223 l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~-p~ga~~~~~~i~~~~~~~~~~~~~~T~~~ 300 (426)
T PRK00062 223 LRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGL-PVGAFGGRREIMEQLAPLGPVYQAGTLSG 300 (426)
T ss_pred HHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCC-cceeeeEHHHHHHhhccCCCceecccCcC
Confidence 999999999999999999999 7777666677788999999999999998 99999999999998853 235568899
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----------chhHH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----------PVSAY 300 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~ 300 (374)
++++++++.++++.++++++.+++++..+++++.|+++..++ +.+...++.|.++.+.+.++.. .....
T Consensus 301 ~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~ 379 (426)
T PRK00062 301 NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA-GIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFA 379 (426)
T ss_pred CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecceEEEEEecCCCcchhhhccccHHHHH
Confidence 999999999999999877899999999999999999887766 4677788999999998854311 01246
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.+.|+++||++.+...+.++++ +.++++|+++++++|+++++ .+
T Consensus 380 ~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~-~~ 425 (426)
T PRK00062 380 RFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFA-AL 425 (426)
T ss_pred HHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHH-hh
Confidence 799999999999988765677775 78999999999999999987 54
No 84
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=8.1e-33 Score=262.18 Aligned_cols=320 Identities=23% Similarity=0.319 Sum_probs=238.6
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe-ccC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC-CGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~-~~~ 79 (374)
+|++++++++.... ...+...+++++|.+.. +.++++|++||++|++.|+++++.+. | +.+|+.+ ..+
T Consensus 71 ~Ai~~q~~~~~~~~--~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~t----g----r~~i~~~~~~~ 140 (431)
T PRK06209 71 EAVREALQDGCNFT--RPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYT----G----RDLVARCADHP 140 (431)
T ss_pred HHHHHHHHhCcCCC--CCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHh----C----CCeEEEeccCc
Confidence 68889988875422 33444557899999977 56899999999999999999998763 3 3677777 566
Q ss_pred CCCcccccccccC-CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 017259 80 FHGRTLAAISMSC-DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC 158 (374)
Q Consensus 80 yhg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~ 158 (374)
|||........+. ...... ........++++|++++++.++++++++++|++||+++. .++.+++++|.++|
T Consensus 141 ~h~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc 213 (431)
T PRK06209 141 FFSTDDWFIGTTPMSAGIPA---SVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLC 213 (431)
T ss_pred cccccccccccCCCCCCCCh---hHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHH
Confidence 6653211110000 000000 011224456788999999999876678999999998754 56899999999999
Q ss_pred HhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhh--cCC------CCCCCCCCC
Q 017259 159 SKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC--IQP------GEHGSTFGG 230 (374)
Q Consensus 159 ~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~--~~~------~~~~~~~~~ 230 (374)
++||+++|+||+++|+++.+ .....++++.||++++||++++|+ ++|++++++++++. +.. ..+++++++
T Consensus 214 ~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lggG~-p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~ 291 (431)
T PRK06209 214 HENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALGNGF-AVSALAGKREYMELGGLEHTDRERVFLLSTTHGA 291 (431)
T ss_pred HHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhcCCc-ccEEEEEHHHHHhhhcccccCCCCceeeccCCCC
Confidence 99999999999999986532 122235688999999999999998 99999999998876 311 125778899
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CC----CchhHHHHHHH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TA----LPVSAYDICLK 305 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~----~~~~~~~~~~~ 305 (374)
++++++++.++++.++++++.++++++.+++++.|+++...+ +....+++.|.++.+.+-. .. .......+.+.
T Consensus 292 np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~-~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (431)
T PRK06209 292 ETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEH-GLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQE 370 (431)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHH
Confidence 999999999999999888999999999999999999887666 3665666666666554421 11 01123367888
Q ss_pred HHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 306 MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 306 l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
|+++|+++.+ ++|+ ..+|++|+++++++|+++++ .+
T Consensus 371 l~~~Gi~~p~-----l~is--~~ht~~dId~~l~~l~~~l~-~~ 406 (431)
T PRK06209 371 TIRRGVLMPS-----LVVS--YAHGDADIERTIDAVHGALG-VY 406 (431)
T ss_pred HHHCCccccc-----cccc--ccCCHHHHHHHHHHHHHHHH-HH
Confidence 9999998732 4555 67899999999999999998 76
No 85
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=237.94 Aligned_cols=333 Identities=29% Similarity=0.479 Sum_probs=265.1
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc-CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF-GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
+|...+++...... ++.+....+.++.|...+ +.+-++|++|||+|+++|+++++.++ ++..+|+.+..|
T Consensus 68 ~A~~kQmat~~tN~-RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ft--------khqDvItldHAY 138 (452)
T KOG1403|consen 68 RAGAKQMATISTNN-RFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFT--------KHQDVITLDHAY 138 (452)
T ss_pred HHHHHHHhHhcccc-hhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhc--------ccCceEEEechh
Confidence 34455555443322 244566667778877755 78889999999999999999999774 236788999999
Q ss_pred CCcccccccccCCccccccCCCCCCCceec-cCCC--------------------HHHHHHHHHh---cCCcEEEEEEcc
Q 017259 81 HGRTLAAISMSCDNEAIRGFGPLLPGHLKV-DFGD--------------------ITALEKIFKE---SGDQIAGFLFEP 136 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d--------------------~~~le~~l~~---~~~~~~~vi~~~ 136 (374)
||+....+-++. -.+..+-....++++++ |++| .+.+++.+++ .+..+++++.++
T Consensus 139 HGHl~s~mE~SP-YKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEs 217 (452)
T KOG1403|consen 139 HGHLQSVMEVSP-YKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAES 217 (452)
T ss_pred ccceeeeeeccc-eeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHH
Confidence 999877766553 11111111111222222 2221 3455666664 345789999999
Q ss_pred ccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccccc-CcccccCCCCCcEEEecccccCCccchhhheeCHHH
Q 017259 137 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 137 ~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
.++-+|.+.|+..+.+++.+..|.+|-+.|.||++.||||.|. .|+++.+++.||+++++|.+|.|. |++.++..+++
T Consensus 218 lQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh-PVa~VattkeI 296 (452)
T KOG1403|consen 218 LQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH-PVAAVATTKEI 296 (452)
T ss_pred HHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-eeeEEeccHHH
Confidence 9999999999999999999999999999999999999999995 789999999999999999999999 99999999999
Q ss_pred HhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 216 MLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 216 ~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
.+++... ....||++|+++++++++.++..++++++++.+..++++.+.|+.+..+. .++.+.++.|+|+++++-.+
T Consensus 297 A~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh-~~IGDvRGvGLFiGIdLVkD 375 (452)
T KOG1403|consen 297 AQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKH-ECIGDVRGVGLFIGIDLVKD 375 (452)
T ss_pred HHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhc-cceeccccceEEEeeeeecc
Confidence 9998753 34568999999999999999999999999999999999999999998887 59999999999999998443
Q ss_pred CC-----chhHHHHHHHHHHC-CeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 294 AL-----PVSAYDICLKMKER-GILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 294 ~~-----~~~~~~~~~~l~~~-Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.. ...+..+..+|++. +|+++..+ .+.+.|-||...+++++++.+..|++++.
T Consensus 376 ~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 376 RKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred cccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 32 23455577777765 79887653 68999999999999999999999999987
No 86
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=261.23 Aligned_cols=316 Identities=17% Similarity=0.173 Sum_probs=232.8
Q ss_pred hHHHHHHHhcc--ccCcCCCCCcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 2 KALQEQAEKLT--LSSRAFYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 2 ~a~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
+++.+++..+. ++.+.+..++++.+++++.+.++ .+ +++.|+|+++|+..++.++ ..+| |+|+
T Consensus 48 ~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~-----~~pG-----DeVl 117 (393)
T COG0436 48 EAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLAL-----LNPG-----DEVL 117 (393)
T ss_pred HHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHh-----cCCC-----CEEE
Confidence 56666666653 33334656666667777777654 33 4999999999999999999 6777 9999
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHH
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAV 154 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l 154 (374)
+++|+|..+......+++.+......... .++. .|+++++++++ ++|+++++++++||||.+. +++.+++|
T Consensus 118 ip~P~Y~~y~~~~~~~gg~~v~v~l~~~~-~~f~----~d~~~l~~~i~---~ktk~i~ln~P~NPTGav~-~~~~l~~i 188 (393)
T COG0436 118 IPDPGYPSYEAAVKLAGGKPVPVPLDEEE-NGFK----PDLEDLEAAIT---PKTKAIILNSPNNPTGAVY-SKEELKAI 188 (393)
T ss_pred EeCCCCcCHHHHHHhcCCEEEEEeCCcCc-cCCc----CCHHHHHhhcC---ccceEEEEeCCCCCcCcCC-CHHHHHHH
Confidence 99999988887777777665443210000 0111 18999999998 5899999999999999888 89999999
Q ss_pred HHHHHhcCCEEEEeccccCCccccc-Cccc-ccCCC---CCcEEEeccccc-CCccchhhheeC-HHHHhhcCCCCCCCC
Q 017259 155 RDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEEV---RPDMVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGST 227 (374)
Q Consensus 155 ~~l~~~~~i~li~Dea~~~~~~~g~-~~~~-~~~~~---~~d~~s~sK~~~-~G~~~~G~~~~~-~~~~~~~~~~~~~~~ 227 (374)
+++|++||++||+||+|.++.+.+. ..+. +..+. ...+.||||.++ .|| |+||++++ +++.+.+.......+
T Consensus 189 ~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGw-RvG~~v~~~~~l~~~~~~~~~~~~ 267 (393)
T COG0436 189 VELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGW-RIGWVVGPPEELIAALRKLKSYLT 267 (393)
T ss_pred HHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccccc-ceeEeecChHHHHHHHHHHHHhcc
Confidence 9999999999999999999877774 2222 22221 122448999999 699 99999988 778887775556777
Q ss_pred CCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeE-EEEeeeEEEEeccCCCchhHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
++.+.++|.++.++|+.-... ...+.++++++.+.+.|.+.. +..... +..+.|.|..++... +..+|
T Consensus 268 ~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~----g~~~~~~p~Ga~Y~~~~i~~~~---d~~~f 340 (393)
T COG0436 268 SCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG----GLSVVKPPEGAFYLFPKIPELL---DSEEF 340 (393)
T ss_pred cCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC----CeeeccCCCeeEEEEeecCCCC---CHHHH
Confidence 899999999999999854221 233445566666666665542 222223 234566666666533 78899
Q ss_pred HHHHHHC-CeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 303 CLKMKER-GILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 303 ~~~l~~~-Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+|+++ ||.+.|+. .+++|++ +..+.+++++++++|.+.++
T Consensus 341 ~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 341 AKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLA 390 (393)
T ss_pred HHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHH
Confidence 9999876 89999852 3799999 66777999999999999887
No 87
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=2.7e-30 Score=247.62 Aligned_cols=311 Identities=19% Similarity=0.202 Sum_probs=228.4
Q ss_pred hHHHHHHHhc-cccC----cCCCCCcHHHHHHHHhcccCCCe-EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEE
Q 017259 2 KALQEQAEKL-TLSS----RAFYNDKFPVFAERLTSMFGYDM-VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS 75 (374)
Q Consensus 2 ~a~~~~~~~~-~~~~----~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~ 75 (374)
+|+.+++++. ..++ .+++.+.+.+|+++|+++++.++ ++++ +|..++..+++.+ .++| |.|+
T Consensus 130 ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~sai~a~-----~~~g-----d~Ii- 197 (481)
T PLN02822 130 ESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFSVIPAF-----CKKG-----DIIV- 197 (481)
T ss_pred HHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHHHHHHh-----CCCC-----CEEE-
Confidence 6778888773 3222 23567889999999999997654 5555 5555788888866 5666 7777
Q ss_pred eccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC------CcE-EEEEEccccCCCCcccCCh
Q 017259 76 CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG------DQI-AGFLFEPIQGEAGVIIPPD 148 (374)
Q Consensus 76 ~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~------~~~-~~vi~~~~~~~~g~~~~~~ 148 (374)
.++.||........+++ .++..++++|.++++..+++.. +++ ++++++++++++|.+.+
T Consensus 198 ~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~-- 263 (481)
T PLN02822 198 ADEGVHWGIQNGLYLSR------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP-- 263 (481)
T ss_pred EeCCccHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC--
Confidence 45668877655554443 3456677888888888776421 234 89999999999999998
Q ss_pred hHHHHHHHHHHhcCCEEEEecccc--CCcccccCcccccCCC---CCcEE--EecccccCCccchhhheeCHHHHhhcCC
Q 017259 149 GYLKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEV---RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQP 221 (374)
Q Consensus 149 ~~l~~l~~l~~~~~i~li~Dea~~--~~~~~g~~~~~~~~~~---~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~ 221 (374)
+++|.++|++||++||+||+|+ .++++|.. ...++++ .+|++ ||||+++. ..||+++++++++.++.
T Consensus 264 --L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~---~GG~i~g~~~ii~~~~~ 337 (481)
T PLN02822 264 --LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALAT---EGGFCTGSARVVDHQRL 337 (481)
T ss_pred --HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhh---CCeEEEcCHHHHHHHHh
Confidence 9999999999999999999998 34555654 3455555 56776 48899971 22568899999998887
Q ss_pred CCCCCCCCCC--HHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---
Q 017259 222 GEHGSTFGGN--PLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--- 295 (374)
Q Consensus 222 ~~~~~~~~~~--~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 295 (374)
...+++|+++ ++.++|+.++++.+.. ++..++++++++++++.|++.. ++.....+.+.++++.+++...
T Consensus 338 ~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~----g~~~~~~~~spi~~l~l~~~~~~~~ 413 (481)
T PLN02822 338 SSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP----GLSIGSNTLSPIVFLHLEKSTGSAK 413 (481)
T ss_pred cCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCCCEEEEEeCCCccccc
Confidence 6677788765 7788888899988765 4688899999999999988752 1211223456677777753200
Q ss_pred --chhHHHHHHHHH-HCCeEeccCC---------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 296 --PVSAYDICLKMK-ERGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 296 --~~~~~~~~~~l~-~~Gi~v~~~~---------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.....++++.|+ ++||.+.+.. +.++|++++..++++|+++++++|+++++ ++
T Consensus 414 ~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~-~~ 478 (481)
T PLN02822 414 EDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAA-SV 478 (481)
T ss_pred chHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHH-HH
Confidence 012467999998 7799998641 34799998889999999999999999987 54
No 88
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.9e-29 Score=237.22 Aligned_cols=304 Identities=14% Similarity=0.156 Sum_probs=208.1
Q ss_pred CCCCcHHHHHHHHhcccC----C-CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFG----Y-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~----~-~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++.+++++++.+| . +++++|+|+++++..++.++ ..+| |+|++.+|+|.++...+...+.
T Consensus 79 G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l-----~~~G-----d~Vlv~~P~y~~~~~~~~~~g~ 148 (405)
T PRK06207 79 GDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT-----VARG-----DKVAIVQPDYFANRKLVEFFEG 148 (405)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh-----cCCC-----CEEEEeCCCchhHHHHHHHcCC
Confidence 445567778888877655 3 68999999999999999988 5677 9999999999887655544433
Q ss_pred CccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
...... ......+ ..+ .|+++++++++ ++++++++++++||+|.+. +.+.+++|+++|++||++||+||+|
T Consensus 149 ~v~~v~-~~~~~~~---~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y 220 (405)
T PRK06207 149 EMVPVQ-LDYLSAD---KRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVY-SAEEIAQIAALARRYGATVIVDQLY 220 (405)
T ss_pred EEEEEe-ccccCcc---cCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccc
Confidence 211110 0000000 001 17889998886 3578888888889999888 8999999999999999999999999
Q ss_pred cCCcccccCc-ccccCCC-CCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 172 SGLARSGRML-ASDWEEV-RPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 172 ~~~~~~g~~~-~~~~~~~-~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
.++.+.+..+ ....... ... +.||||.++ +|+ |+||+++++++.+.+.........+.+.+++.++.++++.-
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl-RiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~ 299 (405)
T PRK06207 221 SRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY-RLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP 299 (405)
T ss_pred cccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc-ceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc
Confidence 9875545322 1111111 122 338999999 899 99999999998888875444445566778888887777531
Q ss_pred h--hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC-----
Q 017259 246 R--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----- 317 (374)
Q Consensus 246 ~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----- 317 (374)
. -++..+..+++++.+.+.|+ .++++....+..|.|+|+.++... .+..++++.|+ ++||.+.|+.
T Consensus 300 ~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~gg~fl~~~l~~~~--~~~~~~~~~l~~~~gV~v~pG~~F~~~ 373 (405)
T PRK06207 300 DGWMKDRIARHQAIRDDLLRVLR----GVEGVFVRAPQAGSYLFPRLPRLA--VSLHDFVKILRLQAGVIVTPGTEFSPH 373 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCceecCCCeeEEEEEeCcccC--CCHHHHHHHHHHhcCEEEeCchHhCCC
Confidence 0 01223333333333433333 222222222345788998886421 15678999997 6799999863
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+++||+++ .+.+++++++++|+++++ ..
T Consensus 374 ~~~~~Ris~~--~~~~~l~~al~rl~~~l~-~~ 403 (405)
T PRK06207 374 TADSIRLNFS--QDHAAAVAAAERIAQLIE-RY 403 (405)
T ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHH-Hh
Confidence 579999965 478999999999999987 54
No 89
>PRK07324 transaminase; Validated
Probab=99.97 E-value=3.2e-29 Score=234.50 Aligned_cols=314 Identities=18% Similarity=0.230 Sum_probs=212.0
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
+|+.+++...... +.......+|++.+++++ ..+++++|+|+++|+..++..+ ..+| |+|++..|
T Consensus 45 ~~~~~~~~~~~~~--Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l-----~~~g-----d~Vl~~~P 112 (373)
T PRK07324 45 EAFYQELGQKKLT--YGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYAL-----VEPG-----DHVISVYP 112 (373)
T ss_pred HHHHHHHhcCCcc--CCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHh-----CCCC-----CEEEEcCC
Confidence 3445555442221 122334566777777754 4578999999999999999887 5667 99999999
Q ss_pred CCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 017259 79 CFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC 158 (374)
Q Consensus 79 ~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~ 158 (374)
+|......+...+...... +...+... ..|++++++.+. ++++++++++++|++|.+. +++.+++|+++|
T Consensus 113 ~y~~~~~~~~~~g~~v~~v----~~~~~~~~--~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a 182 (373)
T PRK07324 113 TYQQLYDIPESLGAEVDYW----QLKEENGW--LPDLDELRRLVR---PNTKLICINNANNPTGALM-DRAYLEEIVEIA 182 (373)
T ss_pred CchhHHHHHHHcCCEEEEE----ecccccCC--CCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHH
Confidence 9977654444333221111 11000000 027888887775 5788999999999999877 899999999999
Q ss_pred HhcCCEEEEeccccCCcccccCccc-ccCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHH
Q 017259 159 SKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 236 (374)
Q Consensus 159 ~~~~i~li~Dea~~~~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
++||++||+||+|.++.+.+..... +..+....+.||||.++ +|+ |+||+++++++++.+.......+++.+.+++.
T Consensus 183 ~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~-RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~ 261 (373)
T PRK07324 183 RSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGI-RVGWIAANEEVIDILRKYRDYTMICAGVFDDM 261 (373)
T ss_pred HHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccc-eeEEEecCHHHHHHHHHHhCcEEecCChHHHH
Confidence 9999999999999987554322111 11111122348999999 799 99999999999888876655556777888888
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEE-eeeEEEEeccCCCchhHHHHHHHHH-HCCeEec
Q 017259 237 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVEFDKTALPVSAYDICLKMK-ERGILAK 314 (374)
Q Consensus 237 aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~ 314 (374)
++..+++. .+.+.++.++..+..++.+.+.....+ ......+. |.+.|+.++... +..+++++|+ ++||.+.
T Consensus 262 ~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~~p~gg~~~~i~~~~~~---~~~~~~~~ll~~~gv~v~ 335 (373)
T PRK07324 262 LASLALEH--RDAILERNRKIVRTNLAILDEWVAKEP-RVSYVKPKAVSTSFVKLDVDM---PSEDFCLKLLKETGVLLV 335 (373)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCC-CceEECCCceEEEEEEeCCCC---CHHHHHHHHHHhcCEEEE
Confidence 88777752 223444444444444444444433332 22223333 455566665433 5778999976 6699999
Q ss_pred cCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 PTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 ~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+. ++++||++ ..+++.+++++++|+++++
T Consensus 336 pg~~F~~~~~iRis~--~~~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 336 PGNRFDLEGHVRIGY--CCDTETLKKGLKKLSEFLR 369 (373)
T ss_pred CccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 974 58999994 4578999999999999987
No 90
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=2.6e-29 Score=237.99 Aligned_cols=309 Identities=19% Similarity=0.222 Sum_probs=225.5
Q ss_pred hHHHHHHHhccccC---c--CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS---R--AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~---~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++..... . .+..+.+.+++++|++++|.+.+++++||++|++.+++.+.. ..+| + +|+.
T Consensus 66 ~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~---~~~g-----~-~I~~ 136 (406)
T PRK13393 66 AAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGS---RLPG-----C-VILS 136 (406)
T ss_pred HHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhc---CCCC-----C-EEEE
Confidence 67788888754421 1 134567899999999999989999999999999999997631 1133 4 6667
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+..||+.+.......+ ..+..++++|++++++.++... +++++++++++++++|.+.+ +++|.
T Consensus 137 ~~~~H~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----l~~i~ 200 (406)
T PRK13393 137 DELNHASMIEGIRHSR------------AEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP----IAEIC 200 (406)
T ss_pred ccchhHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----HHHHH
Confidence 7778987665544332 2234556678999998887542 46889999999999999998 99999
Q ss_pred HHHHhcCCEEEEecccc-CC-cccccCcccccCCCC--CcEE--EecccccCCccchhhheeCHHHHhhcCCCCCC--CC
Q 017259 156 DLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVR--PDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--ST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~~-~~~g~~~~~~~~~~~--~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~~ 227 (374)
++|++||+++|+||+|+ |+ ++.|..+. ...++. ++++ +|||+++. ..||+++++++.+.+...... .+
T Consensus 201 ~l~~~~~~~livDea~~~g~~g~~G~g~~-~~~~~~~~~~i~~~tlsKa~g~---~GG~~~~~~~~~~~l~~~~~~~~~t 276 (406)
T PRK13393 201 DVAEKHGAMTYLDEVHAVGLYGPRGGGIA-EREGLADRLTIIEGTLAKAFGV---MGGYITGSAALCDFIRSFASGFIFT 276 (406)
T ss_pred HHHHHcCCEEEEECCccccccCCCCCchh-hhcCCCCCCeEEEEeCchhhcc---cCceeeCCHHHHHHHHHhCcCceec
Confidence 99999999999999998 64 66665432 333433 4665 99999982 225577888888777654333 34
Q ss_pred CCCCHHHHHHHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDEK-LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
.+.++.+++++.++++.+.+.. ...+++++.+++++.|+++. ++ .+ ++.+.++.+.+.+.. ...++.+.|
T Consensus 277 ~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~---~~~~~i~~v~~~~~~---~~~~l~~~L 347 (406)
T PRK13393 277 TSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG--IP-HL---PNPSHIVPVMVGDPV---LCKQISDEL 347 (406)
T ss_pred CccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC--CC-cC---CCCCCeEEEEeCCHH---HHHHHHHHH
Confidence 5678888899999998875432 24556677888888887642 11 21 345666666554321 467899999
Q ss_pred HH-CCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 307 KE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 307 ~~-~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++ +||++++. +.+.+||++++.++++|+++++++|+++++ ++
T Consensus 348 ~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~-~~ 397 (406)
T PRK13393 348 LDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA-RL 397 (406)
T ss_pred HHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hc
Confidence 88 59999752 247899999999999999999999999988 65
No 91
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=3.8e-29 Score=234.98 Aligned_cols=298 Identities=12% Similarity=0.120 Sum_probs=205.0
Q ss_pred CCCCcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++.+++++.+.+| .+ ++++|+|+++|+..+++.+ .++| |+|++.+|+|+.+...+...+.
T Consensus 58 g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~ 127 (378)
T PRK07682 58 GLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAI-----INPG-----DEVLIVEPSFVSYAPLVTLAGG 127 (378)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-----CCCC-----CEEEEeCCCchhhHHHHHHcCC
Confidence 334455556666655433 33 7999999999999998887 5677 9999999999876554444332
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..... +...+... -.|++++++++. ++++++++++++||+|.+. +++.+++|.++|++|++++|+||+|.
T Consensus 128 ~~~~~----~~~~~~~~--~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~ 197 (378)
T PRK07682 128 VPVPV----ATTLENEF--KVQPAQIEAAIT---AKTKAILLCSPNNPTGAVL-NKSELEEIAVIVEKHDLIVLSDEIYA 197 (378)
T ss_pred EEEEe----ecCCccCC--CCCHHHHHhhcC---cccEEEEEECCCCCcCcCc-CHHHHHHHHHHHHHcCcEEEEehhhh
Confidence 21111 10000000 017889988876 4688888888889999866 89999999999999999999999999
Q ss_pred CCcccccCccc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLAS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
++.+.+..... ...+.... +.||||.++ +|+ |+||+++++++++.+........++.+.+++.++.++++....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~ 276 (378)
T PRK07682 198 ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGW-RLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGND 276 (378)
T ss_pred hcccCCCCCChhhcccccCCEEEEecCcccccChhh-hhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChH
Confidence 87654432221 11122222 348999998 799 9999999999988887543344556788888888888764211
Q ss_pred --hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CCCchhHHHHHHHHH-HCCeEeccCC------
Q 017259 248 --EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKMK-ERGILAKPTH------ 317 (374)
Q Consensus 248 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~~------ 317 (374)
++..++++++++.+.+.|++. ++....+..+.++|..++. .. +..++++.|+ ++||.+.|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~p~g~~~~~~~~~~~~~---~~~~~~~~ll~~~gv~v~pg~~f~~~~ 348 (378)
T PRK07682 277 DVIRMRDSYRKRRNFFVTSFNEI-----GLTCHVPGGAFYAFPSISSTGL---SSEEFAEQLLLEEKVAVVPGSVFGESG 348 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-----CCccCCCCeeEEEEEeccCCCC---CHHHHHHHHHHhCCEEEcCchhhCcCC
Confidence 133455566666666666654 2211122235566665642 22 5778999886 6799998852
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++++||+++ .+++++++++++|+++++
T Consensus 349 ~~~iRis~~--~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 349 EGFIRCSYA--TSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHHHHHHh
Confidence 589999955 578999999999999987
No 92
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=5.7e-29 Score=235.56 Aligned_cols=309 Identities=20% Similarity=0.257 Sum_probs=222.4
Q ss_pred hHHHHHHHhccccC--c---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS--R---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~--~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++..... + .+..+.+.+|+++|++++|.+..++++||++|++.+++++... .+ +.+++.
T Consensus 66 ~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~---~~------~~~v~~ 136 (402)
T TIGR01821 66 QAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKI---IP------GCVIFS 136 (402)
T ss_pred HHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCC---CC------CCEEEE
Confidence 67778887754322 1 1457788999999999999888999999999999999988521 12 345555
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+..+|+.........+. ....++++|++++++.++... ++++++++++++|++|.+.+ +++|.
T Consensus 137 ~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----l~~i~ 200 (402)
T TIGR01821 137 DELNHASMIEGIRHSGA------------EKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP----IEEIC 200 (402)
T ss_pred cchHhHHHHHHHHHcCC------------eEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHH
Confidence 66678766544433321 123345668999999887643 36899999999999999998 99999
Q ss_pred HHHHhcCCEEEEecccc-C-CcccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCC--CCC
Q 017259 156 DLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~--~~~ 227 (374)
++|++||+++|+||+|+ | ++..|... ....++ .+|++ +|||++++ ..||+++++++++.+..... ..+
T Consensus 201 ~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~---~GG~i~~~~~~~~~l~~~~~~~~~t 276 (402)
T TIGR01821 201 DLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGV---VGGYIAASRKLIDAIRSYAPGFIFT 276 (402)
T ss_pred HHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhcc---CCceeecCHHHHHHHHHhCcCceec
Confidence 99999999999999998 4 34444332 233333 35666 99999982 22567888888887764322 234
Q ss_pred CCCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
.+.++.+++++.++++.+.+. ...++.+++.+++++.|++++ ++ .. .+.+.++.+.++... ...++.+.|
T Consensus 277 ~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~---~~~~~i~~i~~~~~~---~a~~~~~~L 347 (402)
T TIGR01821 277 TSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG--IP-VI---PNPSHIVPVIIGDAA---LCKKVSDLL 347 (402)
T ss_pred CcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC--CC-cC---CCCCCEEEEEeCCHH---HHHHHHHHH
Confidence 567888999999999987654 345566778888888887653 21 11 224556666554321 467899998
Q ss_pred HH-CCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 307 KE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 307 ~~-~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++ +||++++. +.+++||+++..++++|+++++++|+++++ ++
T Consensus 348 ~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~ 397 (402)
T TIGR01821 348 LNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD-RL 397 (402)
T ss_pred HhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 75 59998762 346899999999999999999999999988 54
No 93
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.1e-28 Score=234.06 Aligned_cols=309 Identities=19% Similarity=0.235 Sum_probs=222.3
Q ss_pred hHHHHHHHhccccC--c---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS--R---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~--~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++..... + .++.+.+.+|+++|++++|.+..++++||++|++.+++++... .+ +.+++.
T Consensus 67 ~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~---~~------~~~i~~ 137 (407)
T PRK09064 67 EAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKL---IP------DCVIFS 137 (407)
T ss_pred HHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCC---CC------CCEEEE
Confidence 57777777654321 1 1357789999999999998888899999999999999988531 12 344444
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+..+|+.........+ .....++++|++++++.++... +++++++++++++++|.+.+ +++|.
T Consensus 138 ~~~~h~s~~~~~~~~~------------~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~ 201 (407)
T PRK09064 138 DELNHASMIEGIRRSR------------CEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEIC 201 (407)
T ss_pred eCcchHHHHHHHHHcC------------CcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHH
Confidence 5444665433332221 1234456678999999887543 46899999999999999998 99999
Q ss_pred HHHHhcCCEEEEecccc-C-CcccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCC--CCC
Q 017259 156 DLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~--~~~ 227 (374)
++|++||++||+||+|+ | +++.|..+ ....+. .+|++ ||||+++. ..||+++++++++.+..... ..+
T Consensus 202 ~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~---~GG~~~~~~~~~~~l~~~~~~~~~t 277 (407)
T PRK09064 202 DLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV---MGGYIAGSAALVDAVRSYAPGFIFT 277 (407)
T ss_pred HHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc---cCceEecCHHHHHHHHHhCcccccc
Confidence 99999999999999998 5 56666543 233333 45766 99999972 23568888888877654322 224
Q ss_pred CCCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
.+.++.+++++.++++.+... ...++++++++++++.|++++.. ++ .+.+.++.+.+++.. ...++.++|
T Consensus 278 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~~---~~~~~iv~i~~~~~~---~~~~l~~~L 348 (407)
T PRK09064 278 TSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGIP---VM---PNESHIVPVMVGDPE---KCKKASDML 348 (407)
T ss_pred CcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---CC---CCCCCEEEEEeCCHH---HHHHHHHHH
Confidence 466788888899999887654 34577888888888888775311 21 123556666554322 567899998
Q ss_pred HH-CCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 307 KE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 307 ~~-~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++ +||++++. +.+.+||+++..++++|+++++++|+++++ ++
T Consensus 349 ~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~-~~ 398 (407)
T PRK09064 349 LEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWA-RL 398 (407)
T ss_pred HHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 75 59999753 236899999999999999999999999988 65
No 94
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2e-28 Score=230.53 Aligned_cols=299 Identities=15% Similarity=0.168 Sum_probs=204.0
Q ss_pred CCCCcHHHHHHHHhcccC----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..++++.+++++.+.+| .+++++|+|+++++..++..+ .++| |.|++.+|+|..+...+...+..
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~~ 131 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQAL-----VGPG-----DEVVAVTPLWPNLVAAPKILGAR 131 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEeCCCccchHHHHHHCCCE
Confidence 444556667777665544 578999999999999999887 4567 99999999997665444333221
Q ss_pred ccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 94 NEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.... +...+ ...+ .|++++++.++ ++++++++++++|++|.+. +.+.+++|.++|+++|++||+||+|+
T Consensus 132 ~~~v----~~~~~--~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~ 201 (382)
T PRK06108 132 VVCV----PLDFG--GGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYE 201 (382)
T ss_pred EEEe----eCCCC--CCCccCCHHHHHHhcC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhh
Confidence 1110 11000 0001 26888888775 4688888888899999877 89999999999999999999999999
Q ss_pred CCccc-ccCc-c-cccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 173 GLARS-GRML-A-SDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 173 ~~~~~-g~~~-~-~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
++.+. +... . ......... +.||||.++ +|+ |+||+++++++++.+.......+++.+.+.+.++..+++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~ 280 (382)
T PRK06108 202 RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW-RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG 280 (382)
T ss_pred hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc-ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC
Confidence 87543 2111 1 111111222 338999997 699 99999999988888765433345567888888888888642
Q ss_pred hh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC-----
Q 017259 246 RD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----- 317 (374)
Q Consensus 246 ~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----- 317 (374)
.+ ++..++++++.+.+.+.|+.. +++....+..+.++|+.++... +..++++.|+ ++||.+.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~~g~~~~~~l~~~~---~~~~~~~~ll~~~gV~v~pg~~f~~~ 353 (382)
T PRK06108 281 EDFVAELVARLRRSRDHLVDALRAL----PGVEVAKPDGAMYAFFRIPGVT---DSLALAKRLVDEAGLGLAPGTAFGPG 353 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccCCCeeEEEEEeCCCCC---CHHHHHHHHHHhCCEEEeCchhhCCC
Confidence 11 233455555555555555443 2222112234667788776543 5678999886 5799998752
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++|++++. +++++++++++|+++++
T Consensus 354 ~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 354 GEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 5799999775 89999999999998875
No 95
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.97 E-value=2.6e-28 Score=228.99 Aligned_cols=313 Identities=17% Similarity=0.222 Sum_probs=225.2
Q ss_pred hHHHHHHHhcc-cc-Cc---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLT-LS-SR---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~-~~-~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++++.. .+ ++ ++....+.+|+++++++++.+..+++++|+.++..++..+ .++| |.|++.
T Consensus 19 ~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l-----~~~G-----D~Vl~~ 88 (392)
T PLN03227 19 QTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAF-----AKRG-----DLLVVD 88 (392)
T ss_pred HHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHh-----CCCC-----CEEEEe
Confidence 56666766521 11 11 1335578899999999999999999999999998888877 6778 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc-----------CCcEEEEEEccccCCCCccc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES-----------GDQIAGFLFEPIQGEAGVII 145 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----------~~~~~~vi~~~~~~~~g~~~ 145 (374)
++.|.+.... ..+.. ..+..++++|++++++.++.. .++++++++|++++++|.+.
T Consensus 89 ~~~h~s~~~~-~~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~ 155 (392)
T PLN03227 89 RGVNEALLVG-VSLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA 155 (392)
T ss_pred ccccHHHHHH-HHHcC------------CeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc
Confidence 9987543222 12211 234456667777777655432 13689999999999999999
Q ss_pred CChhHHHHHHHHHHhcCCEEEEecccc--CCcccccCcccccCCCCC----cEEEec--ccccCCccchhhheeCHHHHh
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEVRP----DMVILG--KALGGGVIPVSAVLADKEVML 217 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~--~~~~~g~~~~~~~~~~~~----d~~s~s--K~~~~G~~~~G~~~~~~~~~~ 217 (374)
+ +++|.++|++||+++|+||+|+ .+++.|. +..+++++.| |++++| |+++ . .+|++++++++.+
T Consensus 156 ~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~slsk~~g--~-~gg~v~~~~~~~~ 227 (392)
T PLN03227 156 P----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLENAFG--S-VGGMTVGSEEVVD 227 (392)
T ss_pred C----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeechhhhh--c-cCcEEecCHHHHH
Confidence 8 9999999999999999999998 2444455 4567777777 877555 5543 4 4566778888887
Q ss_pred hcCCCCCCCCCCCC--HHHHHHHHHHHHH-HhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE--------EeeeE
Q 017259 218 CIQPGEHGSTFGGN--PLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG--------RGLFN 286 (374)
Q Consensus 218 ~~~~~~~~~~~~~~--~~~~~aa~~al~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~g~~~ 286 (374)
.++...++.+|+.+ ++.++++.++++. ...+++.++++++.+++++.|++. .+| .+.+.++ .++++
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~~~-~~~~~rg~~~~~~~~~~~i~ 304 (392)
T PLN03227 228 HQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--SHP-YALKLRNRLVITSDPISPII 304 (392)
T ss_pred HHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCc-cccccccccccCCCCCCCEE
Confidence 77655566677664 7677777777755 344578999999999999999863 222 3333332 35677
Q ss_pred EEEeccCCCc------hhHHHHHHHHHHCCeEeccC-----------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 287 AVEFDKTALP------VSAYDICLKMKERGILAKPT-----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 287 ~~~~~~~~~~------~~~~~~~~~l~~~Gi~v~~~-----------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.+.+.... ....++++.|+++|+.+.+. .+..+|++++..+|++|+++++++|+++++ .+
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~-~~ 383 (392)
T PLN03227 305 YLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVE-AI 383 (392)
T ss_pred EEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHH-HH
Confidence 7777542100 01258999999999988532 256789999999999999999999999998 65
No 96
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.97 E-value=2.8e-28 Score=232.69 Aligned_cols=286 Identities=15% Similarity=0.135 Sum_probs=200.7
Q ss_pred HHHHHHHhccc----C-CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 24 PVFAERLTSMF----G-YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 24 ~~l~~~l~~~~----~-~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.+|.+.+++++ + .+++++|+|+++++..++.++ .++| |.|++.+|+|.++...+...+......
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l-----~~pg-----d~Vlv~~P~y~~~~~~~~~~g~~~~~v- 192 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAH-----LLPG-----DSVAVEDPCFLSSINMLRYAGFSASPV- 192 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHh-----CCCC-----CEEEEeCCCcHHHHHHHHHcCCeEEee-
Confidence 44555555443 3 358999999999999999988 5677 999999999988766665544321111
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhc-CCEEEEeccccCCcc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE-PIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLAR 176 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~-~~~~~~g~~~~~~~~l~~l~~l~~~~-~i~li~Dea~~~~~~ 176 (374)
+...+ . -|+++++++++ +++++++++ +++||+|.+. +.+.+++|.++|++| +++||+||+|.++..
T Consensus 193 ---~~~~~--g---~~~~~l~~~~~---~~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~ 260 (431)
T PRK15481 193 ---SVDAE--G---MQPEKLERALA---QGARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSS 260 (431)
T ss_pred ---ccCCC--C---CCHHHHHHHHh---cCCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhcc
Confidence 11110 0 26889998886 367788887 5788888877 899999999999999 999999999998743
Q ss_pred cccCcccccCCCCCcE---EEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh----c
Q 017259 177 SGRMLASDWEEVRPDM---VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE----K 249 (374)
Q Consensus 177 ~g~~~~~~~~~~~~d~---~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~----~ 249 (374)
.+...... ...+.+ -||||.+++|+ |+||+++++++.+.+........++.+.+++.++.++++.-..+ +
T Consensus 261 ~~~~~~~~--~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~ 337 (431)
T PRK15481 261 SPYHSVIP--QTTQRWALIRSVSKALGPDL-RLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQ 337 (431)
T ss_pred CCCCCCCc--CCCCCEEEEeeeccccCCCc-eeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHH
Confidence 32211111 112333 39999999999 99999999988888764333344567889999888888642111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-------CCEEE
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVR 322 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~lR 322 (374)
..+.++++.+.+.+.|++. ++....+..|.|+|+.++. +..++++.|.++||.+.|+. .+++|
T Consensus 338 ~~~~~~~~r~~~~~~L~~~-----~~~~~~p~gg~f~~~~l~~-----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iR 407 (431)
T PRK15481 338 ARLFYAQRRQKLARALQQY-----GIAIPSPGDGLNLWLPLDT-----DSQATALTLAKSGWLVREGEAFGVSAPSHGLR 407 (431)
T ss_pred HHHHHHHHHHHHHHHHHHc-----CCccccCCCeEEEEEECCC-----CHHHHHHHHHHCCcEEecCCccccCCCCCeEE
Confidence 2344444444444444433 2222234568888988864 35789999999999998852 35899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHh
Q 017259 323 LTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 323 i~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+++. .+++++++++++|+++++
T Consensus 408 is~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 408 ITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred EEcCC-CChHHHHHHHHHHHHHhc
Confidence 99664 468999999999999875
No 97
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=2.4e-28 Score=232.84 Aligned_cols=298 Identities=19% Similarity=0.205 Sum_probs=220.6
Q ss_pred CCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..++++.+++++.... ..++|++|+|+.+|++++++++ ..+| |.|++.+|+|++........+
T Consensus 133 G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l-----~~pG-----d~v~vE~PtY~~~~~~~~~~g-- 200 (459)
T COG1167 133 GLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL-----LDPG-----DTVLVEDPTYPGALQALEALG-- 200 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHh-----CCCC-----CEEEEcCCCcHHHHHHHHHcC--
Confidence 44555666666666322 5568999999999999999988 5678 999999999998776665544
Q ss_pred ccccccCCCCCCCceeccCC----CHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 94 NEAIRGFGPLLPGHLKVDFG----DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~~~vi~~~-~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
.++..+|.+ |+++|++.++.+ ++++++++| .+||+|..+ |.+..++|.++|++||++||+|
T Consensus 201 -----------~~~~~vp~d~~G~~~e~le~~~~~~--~~k~~y~~P~~qNPtG~tm-s~~rR~~Ll~lA~~~~~~IIED 266 (459)
T COG1167 201 -----------ARVIPVPVDEDGIDPEALEEALAQW--KPKAVYVTPTFQNPTGVTM-SLERRKALLALAEKYDVLIIED 266 (459)
T ss_pred -----------CcEEecCCCCCCCCHHHHHHHHhhc--CCcEEEECCCCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEee
Confidence 334444443 799999999865 788999998 577778777 8999999999999999999999
Q ss_pred ccccCCcccccCc-ccccC---CCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017259 169 EIQSGLARSGRML-ASDWE---EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 244 (374)
Q Consensus 169 ea~~~~~~~g~~~-~~~~~---~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~ 244 (374)
|.|+.+.+.+.+. +...+ +....+.||||.+++|+ |+||+++++++++.+.......+.+.+.+.+.+...-+..
T Consensus 267 D~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl-RlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~ 345 (459)
T COG1167 267 DYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGL-RLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLS 345 (459)
T ss_pred CcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccccc-ceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHc
Confidence 9999886665432 12222 22233459999999999 9999999999999998877788888898988877665552
Q ss_pred HhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc-C-----
Q 017259 245 IRDEKLAERSAHLGEELRQHLFKIQQQF-PNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-T----- 316 (374)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~----- 316 (374)
..-+.+.++++...+..++.+.+....+ |+.... .+..|.++|+.++... +..++.+.++++|+.+.+ +
T Consensus 346 G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~---~~~~l~~~a~~~gv~i~~~g~~f~~ 422 (459)
T COG1167 346 GHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI---DARELLAAALEKGVVVTPLGSAFSA 422 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC---CHHHHHHHHHHCCCEEEcCCccccC
Confidence 1112333333333333333333333332 223333 3445899999998876 789999999999999988 3
Q ss_pred ---CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 ---HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+++|++++.. +++++++++.+|.+++.
T Consensus 423 ~~~~~~~~Rl~~s~~-~~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 423 DGDPRNGLRLSFSSP-SEEEIEEGIKRLAALLR 454 (459)
T ss_pred CCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 146999997754 58899999999999887
No 98
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.5e-28 Score=229.06 Aligned_cols=288 Identities=14% Similarity=0.150 Sum_probs=208.1
Q ss_pred CCCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 17 AFYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.|+.....+|.+.++++++ .+++++|+|+++++..++.++ ..+| |+|++..|+|.++...+...+...
T Consensus 60 ~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l-----~~~g-----d~vlv~~P~y~~~~~~~~~~g~~v 129 (366)
T PRK01533 60 LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAV-----LKAG-----DNIVTAGATFPQYRHHAIIEGCEV 129 (366)
T ss_pred cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCcHHHHHHHHHHcCCEE
Confidence 3556667788888888774 568999999999999999888 5667 999999999977766554333211
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +.. +. ..|+++++++++ ++++++++++++||+|.+. +.+.+++|+++|++++ ++|+||+|.+|
T Consensus 130 ~~v----~~~-~~----~~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~ 195 (366)
T PRK01533 130 KEV----ALN-NG----VYDLDEISSVVD---NDTKIVWICNPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEY 195 (366)
T ss_pred EEe----ecC-CC----CcCHHHHHHHhC---cCCcEEEEeCCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHh
Confidence 110 110 00 127889988876 4678888888899999888 7899999999998877 56779999876
Q ss_pred cccccC-cccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 017259 175 ARSGRM-LASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 249 (374)
Q Consensus 175 ~~~g~~-~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~ 249 (374)
...+.. .........+.+ -||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++.++++ +.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~---~~~ 269 (366)
T PRK01533 196 VTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAVGHEELIEKLNVVR--LPFNVSSLAQKAATIAFG---DDE 269 (366)
T ss_pred hccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHhCCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhC---CHH
Confidence 433211 111111222333 38999999 899 9999999999988887532 457889999999988885 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCC
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSI 329 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~ 329 (374)
+.++.++.....++++......+ ++ ...++.++|+|+.++ +..++.+.|.++||.|++. ++++||+ ..
T Consensus 270 ~~~~~~~~~~~~r~~~~~~l~~~-g~-~~~~~~~nf~~~~~~------~~~~~~~~l~~~GI~Vr~~-~~~iRis---~~ 337 (366)
T PRK01533 270 FIEEIVRVNTEGLRQYESFCKEN-EI-PFYQSQTNFIFLPVE------NGGEIYEACAHAGFIIRPF-PNGVRIT---VG 337 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CC-ccCCCcCcEEEEeCC------CHHHHHHHHHHCCcEEccC-CCceEEe---CC
Confidence 55555554444444454444332 22 223457889998774 3568999999999999997 6899999 66
Q ss_pred CHHHHHHHHHHHHHHHh
Q 017259 330 SSNELQEGSKALHDVLE 346 (374)
Q Consensus 330 ~~e~i~~~~~~l~~~~~ 346 (374)
+.+++++++++|+++++
T Consensus 338 ~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 338 TREQNEGVISVLQQHFE 354 (366)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 88999999999999987
No 99
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=3.7e-28 Score=229.96 Aligned_cols=297 Identities=16% Similarity=0.197 Sum_probs=204.3
Q ss_pred CCcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 20 NDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.++++.+++++.+..+ .+ ++++|+|+++|+..++..+ ..+| |+|++.+|+|..+...+...+...
T Consensus 94 ~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~~ 163 (413)
T PLN00175 94 PELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGL-----INPG-----DEVILFAPFYDSYEATLSMAGAKI 163 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHh-----CCCC-----CEEEEeCCCchhHHHHHHHcCCEE
Confidence 3444555555554433 34 6999999999999988877 5677 999999999977655544433322
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +...+. . ..|++++++++. ++++++++++++||+|.+. +++.+++|+++|++||++||+||+|.++
T Consensus 164 ~~v----~~~~~~--~-~~~~~~l~~~~~---~~~k~i~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l 232 (413)
T PLN00175 164 KTV----TLRPPD--F-AVPEDELKAAFT---SKTRAILINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKL 232 (413)
T ss_pred EEE----ECCccc--C-CCCHHHHHHhcC---cCceEEEecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCcc
Confidence 111 110000 0 126888988886 4688999999999999877 8999999999999999999999999987
Q ss_pred cccccCccc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 175 ARSGRMLAS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 175 ~~~g~~~~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
.+.+..... ...+.... +.||||.++ +|+ |+||+++++++++.+.......+++.+.+.+.++.++++....
T Consensus 233 ~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~-RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~ 311 (413)
T PLN00175 233 AFEGDHISMASLPGMYERTVTMNSLGKTFSLTGW-KIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYY 311 (413)
T ss_pred ccCCcccChhhCCCCcCcEEEEecchhhccCcch-heeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHH
Confidence 544432221 11122222 338999999 899 9999999999988887655556788899999998888863211
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC---------
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH--------- 317 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~--------- 317 (374)
++..++++++++.+.+.|++. ++....+..+.|+|+.++... ..+..++++.|+ ++||.+.|+.
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~g~~f~~~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~ 385 (413)
T PLN00175 312 EELKRDYSAKKDILVEGLKEV-----GFKVYPSSGTYFVMVDHTPFG-FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDG 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----CCeecCCCeeEEEEEeccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCC
Confidence 234455555666666655543 222112233566777663211 013578999987 5699998751
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++. .+++++++++++|+++++
T Consensus 386 ~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 386 KNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred CCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 369999955 589999999999998876
No 100
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.3e-28 Score=230.02 Aligned_cols=292 Identities=13% Similarity=0.146 Sum_probs=202.5
Q ss_pred CcHHHHHHHHhccc----CC-CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMF----GY-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~----~~-~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++++.+.. .. +++++|+|+++++..++.++ ..+| |.|++.+|+|.++...+...+....
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~-----~~~G-----d~Vlv~~P~y~~~~~~~~~~G~~~~ 142 (399)
T PRK07681 73 EFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVY-----ANPG-----DIILVPDPGYTAYETGIQMAGATSY 142 (399)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHh-----CCCC-----CEEEECCCCccchHHHHHhcCCEEE
Confidence 34445555555432 34 68999999999999988877 5677 9999999999887665554443221
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+... ..|++++++++. ++++++++++++||+|.+. +++.+++|.++|++||++||+||+|.++.
T Consensus 143 ~v----~~~~~~~~--~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~ 212 (399)
T PRK07681 143 YM----PLKKENDF--LPDLELIPEEIA---DKAKMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFY 212 (399)
T ss_pred EE----ecCCCCCC--cCCHHHHHHhcc---ccceEEEEeCCCCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhe
Confidence 11 11110000 026888887775 4688899888899999887 89999999999999999999999999875
Q ss_pred ccccCc-cc-ccCCCC---CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 176 RSGRML-AS-DWEEVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 176 ~~g~~~-~~-~~~~~~---~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
+.+... .. ...+.. ..+.||||.++ +|+ |+||+++++++++.+........++.+.+.+.++.++++....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 291 (399)
T PRK07681 213 FDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFC 291 (399)
T ss_pred eCCCCCCChhhCCCCcccEEEEeecccccCCccc-eeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHH
Confidence 443321 11 111111 12349999998 899 9999999999988887654445677888888888887764211
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHH-CCeEeccCC------CCE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTI 320 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~ 320 (374)
++..+.++++.+.+.+.|++. ++....+..|.++|+.++... +..++++.|++ +||.+.|+. .++
T Consensus 292 ~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~~g~f~~~~l~~~~---~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~ 363 (399)
T PRK07681 292 EKNRGIYQERRDTLVDGFRTF-----GWNVDKPAGSMFVWAEIPKGW---TSLSFAYALMDRANVVVTPGHAFGPHGEGF 363 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeeeEEEEECCCCC---CHHHHHHHHHHhCCEEEeCChhhCcCCCCe
Confidence 122333444444444444432 222222345888898887544 57889999987 899998852 479
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+||++. .+++++++++++|++
T Consensus 364 iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 364 VRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred EEEEec--CCHHHHHHHHHHHHH
Confidence 999955 578999999999988
No 101
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.9e-28 Score=227.22 Aligned_cols=287 Identities=16% Similarity=0.149 Sum_probs=195.3
Q ss_pred CCCCcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccc
Q 017259 18 FYNDKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 89 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~ 89 (374)
|+.+...+|.+.+++++ ..+++++|+|+++++..++.++ .++| |.|++..|+|+++...+..
T Consensus 62 Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~-----~~~g-----d~v~v~~P~y~~~~~~~~~ 131 (368)
T PRK03317 62 YPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAF-----GGPG-----RTALGFVPSYSMHPIIARG 131 (368)
T ss_pred CCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHh-----cCCC-----CEEEEeCCChHHHHHHHHh
Confidence 33434444555555543 3468999999999999999988 5667 9999999999887655443
Q ss_pred ccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 90 MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
.+.... . .+...+.. .|+++++++++++ +++++++++++||+|.+.+ .+++.++|+.++++||+||
T Consensus 132 ~g~~~~-~---~~~~~~~~----~d~~~l~~~~~~~--~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE 197 (368)
T PRK03317 132 THTEWV-E---GPRAADFT----LDVDAAVAAIAEH--RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDE 197 (368)
T ss_pred cCCeeE-E---cccCCCCC----CCHHHHHHHHhcc--CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeC
Confidence 221110 0 00000111 1789999888743 5667778888999999986 6666666666689999999
Q ss_pred cccCCcccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 170 IQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
+|++|.+.+........+..++++ ||||.++ +|+ |+||+++++++++.+.... .+++.+++++.++.++++..
T Consensus 198 ~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~ 274 (368)
T PRK03317 198 AYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG-RLGYLAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA 274 (368)
T ss_pred CchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh-hhhhhhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH
Confidence 999886555433333333345655 9999998 799 9999999999998887533 46788899999988888743
Q ss_pred hh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEE-EeccCCCchhHHHHHHHHHHCCeEeccCC-CCEEE
Q 017259 246 RD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV-EFDKTALPVSAYDICLKMKERGILAKPTH-DTIVR 322 (374)
Q Consensus 246 ~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~lR 322 (374)
.. .+..++++++.+.+.+.|+.. ++ ....+.+.++++ .++ +..++.+.|.++||.+++.+ ++++|
T Consensus 275 ~~~~~~~~~~~~~~~~l~~~L~~~-----g~-~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Gv~v~~~~~~~~iR 342 (368)
T PRK03317 275 DELLASVAALRAERDRVVAWLREL-----GL-RVAPSDANFVLFGRFA------DRHAVWQGLLDRGVLIRDVGIPGWLR 342 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-----CC-EeCCCCCcEEEEeccC------CHHHHHHHHHHCCEEEEeCCCCCeEE
Confidence 21 122233344444444444332 22 112334555444 222 46789999999999998854 58999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHh
Q 017259 323 LTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 323 i~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|++ .+.++++.++++|+++++
T Consensus 343 i~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 343 VTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred Eec---CCHHHHHHHHHHHHHHHH
Confidence 993 477899999999998876
No 102
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=1.4e-27 Score=224.97 Aligned_cols=293 Identities=12% Similarity=0.144 Sum_probs=192.9
Q ss_pred CcHHHHHHHHhccc----CCC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMF----GYD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~----~~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++++.+.+ ..+ ++++|+|+++++..++.++ ..+| |+|++.+|+|.++...+...+....
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~~~ 141 (388)
T PRK07366 72 DFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAV-----LNPG-----DFALLLDPGYPSHAGGVYLAGGQIY 141 (388)
T ss_pred HHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHhcCCEEE
Confidence 34445555554432 345 6999999999999998887 5677 9999999999887666555443221
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+... ..|++++++.+. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.
T Consensus 142 ~v----~~~~~~~~--~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~ 211 (388)
T PRK07366 142 PM----PLRAENDF--LPVFADIPTEVL---AQARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLV 211 (388)
T ss_pred EE----ECCCccCC--CCCHHHHHHhhc---ccceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcc
Confidence 11 11110000 125677766654 4678889988999999877 89999999999999999999999999875
Q ss_pred ccccC--cccccC-CCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 176 RSGRM--LASDWE-EVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 176 ~~g~~--~~~~~~-~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
+.+.. ...... ..... +-||||.++ +|+ |+||+++++++++.+........++.....+.++.+++.. .+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~--~~ 288 (388)
T PRK07366 212 FDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF-RIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG--PQ 288 (388)
T ss_pred cCCCCCCCChhhCCCCcccEEEEeecccccCCcch-hheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC--cH
Confidence 44421 111111 11122 239999997 899 9999999999988887543333343333344455555531 22
Q ss_pred cH----HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------
Q 017259 249 KL----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------ 317 (374)
Q Consensus 249 ~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------ 317 (374)
++ ++.++++++.+.+.|++. +.....+..|.|+|+.+++.. ..+..++++.|+ ++||.+.|+.
T Consensus 289 ~~l~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~f~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~ 362 (388)
T PRK07366 289 ATVQQTVQIFRQRRDAFINALHQI-----GWPVPLPEATMYVWAKLPEPW-QGNSVEFCTQLVAQTGVAASPGSGFGKSG 362 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeeEEEEEECCccc-CCCHHHHHHHHHHhCCEEEeCchHhCcCC
Confidence 33 344444444454444432 222223456888898886521 013577888875 6799999862
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 318 DTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
.+++||++. .+++++++++++|+++
T Consensus 363 ~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 363 EGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 479999954 5789999999999865
No 103
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=226.05 Aligned_cols=302 Identities=16% Similarity=0.192 Sum_probs=213.0
Q ss_pred hHHHHHHHhcc---ccCcCCC--CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLT---LSSRAFY--NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~---~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++++.. +.++.+. .+...+|+++|++++|.+.+++++||++|++.+++.+ ..+| +.|++.
T Consensus 75 ~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l-----~~~g-----~~v~~~ 144 (407)
T PRK07179 75 KAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTI-----ADPN-----TPVYID 144 (407)
T ss_pred HHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh-----CCCC-----CEEEEE
Confidence 57777776642 2233322 3578899999999999999999999999999999988 4456 888887
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 156 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~ 156 (374)
...+.... ......+ ..+..++++|++++++.++++ .++++++++++|++|.+.+ +++|.+
T Consensus 145 ~~~h~s~~-~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~n~tG~i~p----l~~I~~ 205 (407)
T PRK07179 145 FFAHMSLW-EGVRAAG------------AQAHPFRHNDVDHLRRQIERH--GPGIIVVDSVYSTTGTIAP----LADIVD 205 (407)
T ss_pred CCcCHHHH-HHHHHCC------------CeEEEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCCcccc----HHHHHH
Confidence 66543322 1111111 123334446999999999742 4788999999999999998 999999
Q ss_pred HHHhcCCEEEEeccccC--CcccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCC--CCC
Q 017259 157 LCSKYNILMIADEIQSG--LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STF 228 (374)
Q Consensus 157 l~~~~~i~li~Dea~~~--~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~~~ 228 (374)
+|++||+++|+||+|+. ++..|..+ ...++. .+|++ |+||+++ . ++|++++++++++.+...... .+.
T Consensus 206 l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g--~-~~G~l~~~~~~~~~~~~~~~~~~~~~ 281 (407)
T PRK07179 206 IAEEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFITASLAKAFA--G-RAGIITCPRELAEYVPFVSYPAIFSS 281 (407)
T ss_pred HHHHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEEeechHhhh--c-cCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence 99999999999999983 33344332 223343 23664 6789986 3 678899988887766532111 122
Q ss_pred CCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
+.++...+++.++++.+... +..++++++.+++++.|++++ + .+ .+.+.++++.++... ....+.+.|.
T Consensus 282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g--~-~v----~~~~~i~~l~~~~~~---~~~~~~~~L~ 351 (407)
T PRK07179 282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG--Y-NI----RSESQIIALETGSER---NTEVLRDALE 351 (407)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--C-CC----CCCCCEEEEEeCCHH---HHHHHHHHHH
Confidence 22445555566777776544 467888899999999888762 1 11 134677777665432 4577888999
Q ss_pred HCCeEe----ccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 308 ERGILA----KPT---HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 308 ~~Gi~v----~~~---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++||.+ .+. ..+.+||+++..+|++|+++++++|+++++
T Consensus 352 ~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~ 397 (407)
T PRK07179 352 ERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARD 397 (407)
T ss_pred HCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 999974 332 257999999999999999999999999988
No 104
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.1e-27 Score=219.61 Aligned_cols=285 Identities=20% Similarity=0.255 Sum_probs=215.7
Q ss_pred CCCCCcHHHHHHHHhcccC-C--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 17 AFYNDKFPVFAERLTSMFG-Y--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~-~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.|+.+...++.+.++++++ . ++|+.++|+++.+...++++ ..+| |.|++..|+|..+...+...+..
T Consensus 53 rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~-----~~~g-----d~vl~~~Ptf~~Y~~~a~~~g~~ 122 (356)
T COG0079 53 RYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF-----VEPG-----DTVLIPEPTFSMYEIAAQLAGAE 122 (356)
T ss_pred cCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh-----hcCC-----CEEEEcCCChHHHHHHHHhcCCe
Confidence 4677789999999999987 3 58899999999999999998 4566 99999999997776666655432
Q ss_pred ccccccCCCCCCCceeccC----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 94 NEAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
+..++. .|++.+.+++. ++++++++.+++||||... +.+.++++.+.+.+ +.+||+||
T Consensus 123 -------------~~~v~~~~~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~-~~~vVvDE 184 (356)
T COG0079 123 -------------VVKVPLKEFRLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPE-GGLVVIDE 184 (356)
T ss_pred -------------EEEecccccccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeC
Confidence 222222 26788877777 4789999999999999998 68888888888888 99999999
Q ss_pred cccCCcccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 170 IQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
+|.+|.. .. ........++++ ||||.+| +|+ |+||+++++++++.+.. ....|+.+.++++++.++++.-
T Consensus 185 AY~eF~~--~~-~~~l~~~~~nlivlRTfSKa~gLAGl-RlGy~ia~~~~i~~l~~--vr~p~~v~~~a~~aa~aal~~~ 258 (356)
T COG0079 185 AYIEFSP--ES-SLELLKYPPNLIVLRTFSKAFGLAGL-RVGYAIANPELIAALNK--VRPPFNVSSPALAAAIAALRDA 258 (356)
T ss_pred chhhcCC--ch-hhhhccCCCCEEEEEecHHhhhcchh-ceeeccCCHHHHHHHHH--hcCCCCCCHHHHHHHHHHcccH
Confidence 9998854 21 222222233344 9999999 799 99999999999999885 5668888999999999988753
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCE
Q 017259 246 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTI 320 (374)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~ 320 (374)
++.+...+....-+++|.+....+ +.....++..+|+.+.+++. ....+.+.|.++||+++... +++
T Consensus 259 ---~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~pS~aNFvlv~~~~~----~~~~l~~~L~~~giivR~~~~~~~~~~~ 330 (356)
T COG0079 259 ---DYLEESVERIREERERLYAALKAL-GLFGVFPSQANFVLVRVPDA----EAAALAEALLKKGILVRDCSSVGLLPGY 330 (356)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcEEEEECCCc----cHHHHHHHHHHCCEEEEeCCCCCCCCCe
Confidence 344444444444444444444333 22223445588888877642 35689999999999999874 369
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 321 VRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+||+ ..++++.++++++|+++++
T Consensus 331 lRit---vgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 331 LRIT---VGTPEENDRLLAALREVLK 353 (356)
T ss_pred EEEE---eCCHHHHHHHHHHHHHHHh
Confidence 9999 6788999999999999886
No 105
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=224.42 Aligned_cols=301 Identities=15% Similarity=0.198 Sum_probs=206.2
Q ss_pred CcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
....++++.++++++. +++++++|+++++..++..+ ..+| ++|++.+|+|+.....+...+......
T Consensus 66 ~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~~~~~v- 134 (380)
T PRK06225 66 EGFPELRELILKDLGLDDDEALITAGATESLYLVMRAF-----LSPG-----DNAVTPDPGYLIIDNFASRFGAEVIEV- 134 (380)
T ss_pred cchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCCCcchHHHHHHhCceEEee-
Confidence 3467899999998754 58999999999999999887 4566 899999999976543332222211110
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
+....-... ..|++++++.+. ++++++++.+++|++|.+. +.+.+++|.++|++||+++|+||+|.+|.. +
T Consensus 135 ---~~~~~~~~~-~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~ 205 (380)
T PRK06225 135 ---PIYSEECNY-KLTPELVKENMD---ENTRLIYLIDPLNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-E 205 (380)
T ss_pred ---ccccccCCc-cCCHHHHHhhcC---CCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-c
Confidence 100000000 126888888776 4688888778888898877 799999999999999999999999987632 2
Q ss_pred cCccccc-CCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHH
Q 017259 179 RMLASDW-EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAH 256 (374)
Q Consensus 179 ~~~~~~~-~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~ 256 (374)
....... ......+.||||.++ +|+ |+||+++++++++.+.... ..+++.+.+++.++.++++.. +++.+++++
T Consensus 206 ~~~~~~~~~~~~i~~~s~SK~~g~~G~-RiG~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~ 281 (380)
T PRK06225 206 HTLAAEYAPEHTVTSYSFSKIFGMAGL-RIGAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKVK--DEWIDRIRR 281 (380)
T ss_pred CCchhhcCCCCEEEEeechhhcCCccc-eeEEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhcc--hHHHHHHHH
Confidence 2111111 112223559999998 798 9999999999988877532 235677888888887777642 344455544
Q ss_pred HHHHHHHHHHHHHHhCCCc-eeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC-------CCCEEEEecCCC
Q 017259 257 LGEELRQHLFKIQQQFPNY-VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLS 328 (374)
Q Consensus 257 ~~~~~~~~l~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-------~~~~lRi~~~~~ 328 (374)
..++.++.+.+....+++. ....++.+.++|+.++... .+..++.+.|.++||.++++ +.+++|+++ .
T Consensus 282 ~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~ 357 (380)
T PRK06225 282 TTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG--IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--S 357 (380)
T ss_pred HHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc--CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEe--C
Confidence 4444444444443333222 1223345778888875421 15788999999999999875 246899995 4
Q ss_pred CCHHHHHHHHHHHHHHHhccCC
Q 017259 329 ISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 329 ~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+++++++++++|+++++ .++
T Consensus 358 ~~~e~l~~~~~~l~~~~~-~~~ 378 (380)
T PRK06225 358 IPREQVEVFCEEFPDVVE-TLR 378 (380)
T ss_pred CCHHHHHHHHHHHHHHHH-Hhh
Confidence 578999999999999998 654
No 106
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=9.5e-28 Score=207.67 Aligned_cols=314 Identities=23% Similarity=0.369 Sum_probs=246.5
Q ss_pred cHHHHHHHHhc----cc--CCCeEEecCChHHHHHHHHHHHH-HcccccccCCCC------------------ccEEEEe
Q 017259 22 KFPVFAERLTS----MF--GYDMVLPMNTGAEGVETALKLAR-KWGYVKKKFSID------------------EAIIVSC 76 (374)
Q Consensus 22 ~~~~l~~~l~~----~~--~~~~~~~~~~gs~a~~~al~~~~-~~~~~~~G~~~~------------------~~~vi~~ 76 (374)
+..++++.|.. .. |.+.+++.-+|+.|++.|++++- .|...++| ..+ .-.|+.+
T Consensus 120 P~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg-~~~~s~~e~eScm~n~aPg~P~lsvlsF 198 (484)
T KOG1405|consen 120 PPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERG-QAGFSAEELESCMINQAPGAPDLSVLSF 198 (484)
T ss_pred ChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHhcCCCCCCceeeeee
Confidence 33444444444 33 77789999999999999998874 33222222 111 2569999
Q ss_pred ccCCCCcccccccccCCccccc-cCCC--CC-CCceeccCC--------------CHHHHHHHHHhcC---CcEEEEEEc
Q 017259 77 CGCFHGRTLAAISMSCDNEAIR-GFGP--LL-PGHLKVDFG--------------DITALEKIFKESG---DQIAGFLFE 135 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~-~~~~--~~-~~~~~~~~~--------------d~~~le~~l~~~~---~~~~~vi~~ 135 (374)
.++|||.+..+.+.+..-.++. .+.. |+ .+.....|+ -++++|+.|..+. ..++++|+|
T Consensus 199 ~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvE 278 (484)
T KOG1405|consen 199 KGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVE 278 (484)
T ss_pred ccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEee
Confidence 9999999999888776433221 1111 10 111111111 1677888888654 468999999
Q ss_pred cccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCC--CCcEEEeccccc-CCccchhhheeC
Q 017259 136 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALG-GGVIPVSAVLAD 212 (374)
Q Consensus 136 ~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~--~~d~~s~sK~~~-~G~~~~G~~~~~ 212 (374)
|+++.+|.-..|+++++.|.++|++||+.+|+||+|+|.|.+|..|+.+++++ .||+++|||-+- ||+ .-.
T Consensus 279 PIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf------fh~ 352 (484)
T KOG1405|consen 279 PIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF------FHD 352 (484)
T ss_pred chhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc------ccC
Confidence 99999999999999999999999999999999999999999999999999876 579999998765 555 222
Q ss_pred HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc
Q 017259 213 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 292 (374)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 292 (374)
+++. .=.+.....||.+.+.-...+.++++.++++++.......++.+..+|.++...+|+.+...+++|.|+.+++++
T Consensus 353 ~~fr-pn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps 431 (484)
T KOG1405|consen 353 EEFR-PNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS 431 (484)
T ss_pred cccC-CCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC
Confidence 2221 111223556888888888888899999999999999999999999999999999988888899999999999988
Q ss_pred CCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 293 TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 293 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+. ..++++..++.+|+.+..++...+|+.|++..++-+.+-+++++++++.
T Consensus 432 ~~---~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 432 GS---IRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred hH---HHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 76 7889999999999999999999999999999999999999999999886
No 107
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=2e-27 Score=223.82 Aligned_cols=278 Identities=15% Similarity=0.125 Sum_probs=192.3
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC
Q 017259 35 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 114 (374)
Q Consensus 35 ~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 114 (374)
..+++++|+|+++++..++.++ ..+| |+|++.+|+|..+...+...+...... +...+... -.|
T Consensus 91 ~~~~i~it~G~~~al~~~~~~~-----~~~g-----d~vlv~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~~--~~d 154 (387)
T PRK08960 91 DPERILVTPGGSGALLLASSLL-----VDPG-----KHWLLADPGYPCNRHFLRLVEGAAQLV----PVGPDSRY--QLT 154 (387)
T ss_pred ChhhEEEccCcHHHHHHHHHHh-----cCCC-----CEEEEcCCCCcchHHHHHhcCCeEEEE----ecCcccCC--CCC
Confidence 4568999999999999999877 5677 999999999987765554433211111 11010000 026
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEE-
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV- 193 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~- 193 (374)
++++++.++ ++++++++.+++||+|.+. +.+.+++|+++|++||++||+||+|.++.+.+.... .....++++
T Consensus 155 ~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~--~~~~~~~vi~ 228 (387)
T PRK08960 155 PALVERHWN---ADTVGALVASPANPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAAS--VLEVDDDAFV 228 (387)
T ss_pred HHHHHHHhC---ccceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC--hhhccCCEEE
Confidence 888888776 4567777777889999888 899999999999999999999999998744332211 122334543
Q ss_pred --Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHH----HHHHHHHHHHHHHHH
Q 017259 194 --ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA----ERSAHLGEELRQHLF 266 (374)
Q Consensus 194 --s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~----~~~~~~~~~~~~~l~ 266 (374)
||||.++ +|+ |+||+++++++++.+.......+.+.+.+.+.++.++++. ..+++. +.++++.+.+.+.|+
T Consensus 229 ~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~ 306 (387)
T PRK08960 229 LNSFSKYFGMTGW-RLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALR 306 (387)
T ss_pred EeecccccCCccc-EEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999997 799 9999999999888877554445567788898888887752 112233 334444444444444
Q ss_pred HHHHhCCCcee-eEEEEeeeEEEEecc-CCCchhHHHHHHHHH-HCCeEeccCC-------CCEEEEecCCCCCHHHHHH
Q 017259 267 KIQQQFPNYVK-EVRGRGLFNAVEFDK-TALPVSAYDICLKMK-ERGILAKPTH-------DTIVRLTPPLSISSNELQE 336 (374)
Q Consensus 267 ~~~~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~ 336 (374)
. + +... ..+..+.++|+.+++ .. +..++++.|+ ++||.+.|+. .+++||+++ .+.+.+.+
T Consensus 307 ~----~-~~~~~~~p~g~~f~~~~~~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~ 376 (387)
T PRK08960 307 E----L-GFGIAVEPQGAFYLYADISAFGG---DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQE 376 (387)
T ss_pred h----c-CCcCCcCCCeeEEEEEeccccCC---CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHH
Confidence 3 2 2221 123457788888764 22 5678998876 5799998851 469999966 36788999
Q ss_pred HHHHHHHHHh
Q 017259 337 GSKALHDVLE 346 (374)
Q Consensus 337 ~~~~l~~~~~ 346 (374)
++++|+++++
T Consensus 377 al~~l~~~~~ 386 (387)
T PRK08960 377 AVERIARGLR 386 (387)
T ss_pred HHHHHHHHHh
Confidence 9998887764
No 108
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.5e-27 Score=223.23 Aligned_cols=300 Identities=13% Similarity=0.170 Sum_probs=205.6
Q ss_pred CCCCcHHHHHHHHhcccC-----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~-----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++.+++.+++.+| .+++++|+|+++++..++..+ ..+| |+|++.+|+|..+.......+.
T Consensus 66 G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~ 135 (389)
T PRK05957 66 GIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI-----TDPG-----DEIILNTPYYFNHEMAITMAGC 135 (389)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEeCCCCcCHHHHHHhcCC
Confidence 344567778888887765 347999999999999888877 4567 9999999999665443332221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
... +.+...+.. -|++++++.++ ++++++++.+++|++|.+. +++.+++|+++|++||++||+||+|.
T Consensus 136 ~~~----~v~~~~~~~----~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~ 203 (389)
T PRK05957 136 QPI----LVPTDDNYQ----LQPEAIEQAIT---PKTRAIVTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYE 203 (389)
T ss_pred EEE----EeecCCCCC----cCHHHHHHhcC---cCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccch
Confidence 111 111111111 27899998886 4788888888899999888 79999999999999999999999999
Q ss_pred CCcccccC-ccc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 173 GLARSGRM-LAS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 173 ~~~~~g~~-~~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
++.+.+.. ... ...+.... +.||||.++ +|+ |+||+++++++++.+.........+.+.+++.++..+++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 282 (389)
T PRK05957 204 YFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGK 282 (389)
T ss_pred hccCCCCCccChhhCCCccCcEEEEecchhhccCccc-eeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh
Confidence 77544322 111 11122222 348999998 799 999999999999888765444455667788888877775311
Q ss_pred h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC-----
Q 017259 247 D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----- 317 (374)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----- 317 (374)
. ++..+.++++++.+.+.|+. +++.... ....|.++|+.++... +..++++.|+ ++||.+.|+.
T Consensus 283 ~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~gg~~~~~~~~~~~---~~~~~~~~l~~~~gv~v~pg~~f~~~ 355 (389)
T PRK05957 283 SYCQQHLPEIAQVRQILLKSLGQ----LQDRCTLHPANGAFYCFLKVNTDL---NDFELVKQLIREYRVAVIPGTTFGMK 355 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCccccCCCeeEEEEEeCCCCC---ChHHHHHHHHHHCCEEEccchhhCCC
Confidence 0 12334444444444444443 2222121 2334677888876543 6789999987 5799999863
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+++||+++. .+++++++++++|.+.++ .+
T Consensus 356 ~~~~iRis~~~-~~~~~l~~~~~~l~~~~~-~~ 386 (389)
T PRK05957 356 NGCYLRIAYGA-LQKATAKEGIERLVQGLK-TI 386 (389)
T ss_pred CCCEEEEEEec-CCHHHHHHHHHHHHHHHH-hh
Confidence 4699999653 478899999999998887 43
No 109
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=2.3e-27 Score=223.59 Aligned_cols=285 Identities=15% Similarity=0.177 Sum_probs=196.0
Q ss_pred CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHH
Q 017259 37 DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 116 (374)
Q Consensus 37 ~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 116 (374)
+++++|+|+++|++.++..+ ..+| |+|++.+|+|.++.......+...... +. +..... .|++
T Consensus 92 ~~i~it~G~~~al~~~~~~~-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~~~~~~----~~--~~~~~~-~d~~ 154 (391)
T PRK07309 92 NEILVTIGATEALSASLTAI-----LEPG-----DKVLLPAPAYPGYEPIVNLVGAEIVEI----DT--TENDFV-LTPE 154 (391)
T ss_pred CcEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEeCCCCcchHHHHHHcCCEEEEE----ec--CCcCCc-CCHH
Confidence 57999999999999998877 5567 999999999988765544433221111 11 000000 2789
Q ss_pred HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC-cccccCCCC--CcEE
Q 017259 117 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVR--PDMV 193 (374)
Q Consensus 117 ~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~-~~~~~~~~~--~d~~ 193 (374)
++++++++.+++++++++++++||+|.+. +.+.+++|.++|++||+++|+||+|.++...+.. ......... .-+.
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~ 233 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNYPANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILIN 233 (391)
T ss_pred HHHHHhhccCCCeEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEe
Confidence 99999876545788999988888999777 7999999999999999999999999987543422 111111111 1133
Q ss_pred Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHHHHHHH
Q 017259 194 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQ 270 (374)
Q Consensus 194 s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 270 (374)
||||.++ +|+ |+||+++++++++.+.........+.+.+++.++.++++.... ....++++++++++.+.|+..
T Consensus 234 S~SK~~g~~Gl-RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 310 (391)
T PRK07309 234 GLSKSHAMTGW-RIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-- 310 (391)
T ss_pred cChhhccCccc-eeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC--
Confidence 8999998 899 9999999999988887543333446678888888877764211 123455555666666655543
Q ss_pred hCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH-HHCCeEeccCC------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 271 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM-KERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 271 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~------~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
++....+..+.++|+.++... ..+..++++.+ .++||.+.|+. +++|||+++ .+.+++++++++|++
T Consensus 311 ---~~~~~~p~gg~~~~~~l~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~ 384 (391)
T PRK07309 311 ---GFKIIKPDGAFYIFAKIPAGY-NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKE 384 (391)
T ss_pred ---CCeecCCCeeEEEEEECCCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence 222112234566677776431 11456788775 46899998763 579999955 478899999999999
Q ss_pred HHhccC
Q 017259 344 VLELDL 349 (374)
Q Consensus 344 ~~~~~~ 349 (374)
+++ ++
T Consensus 385 ~~~-~~ 389 (391)
T PRK07309 385 YME-EH 389 (391)
T ss_pred HHH-hh
Confidence 987 54
No 110
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.4e-27 Score=223.04 Aligned_cols=293 Identities=13% Similarity=0.189 Sum_probs=200.3
Q ss_pred CcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 21 DKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 21 ~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
.+++.+++++.+.+ ..+++++|+|+++|+..++.++ ..+| |+|++..|+|.++...+...+.....
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~-----~~~g-----d~vlv~~p~y~~~~~~~~~~g~~~~~ 139 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSI-----LDPG-----DEVIIHEPYFTPYKDQIEMVGGKPII 139 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHh-----cCCC-----CEEEEeCCCCcchHHHHHHcCCEEEE
Confidence 34445555554432 4578999999999999999988 5667 99999999998776655544332111
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 176 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~ 176 (374)
. +...+... ..|++++++.++ ++++++++++++||+|.+. |.+.+++|.++|++||++||+||+|.++.+
T Consensus 140 ~----~~~~~~~~--~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~ 209 (384)
T PRK06348 140 L----ETYEEDGF--QINVKKLEALIT---SKTKAIILNSPNNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSF 209 (384)
T ss_pred e----cCCcCcCC--cCCHHHHHHhhC---cCccEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEeccccccee
Confidence 1 11000000 027899988876 4678888888888999877 899999999999999999999999998754
Q ss_pred cccCccc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--hc
Q 017259 177 SGRMLAS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EK 249 (374)
Q Consensus 177 ~g~~~~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~ 249 (374)
.+..... ...+.... +.||||.++ +|+ |+||+++++++.+.+........++.+.+++.++..+++..+. +.
T Consensus 210 ~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 288 (384)
T PRK06348 210 YEDFVPMATLAGMPERTITFGSFSKDFAMTGW-RIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPL 288 (384)
T ss_pred CCCccchhhcCCCcCcEEEEecchhccCCccc-cceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHH
Confidence 3322111 11122223 338999999 899 9999999999888877554555677889999988888763211 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEecc-CCCchhHHHHHHHHH-HCCeEeccCC------CCE
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDK-TALPVSAYDICLKMK-ERGILAKPTH------DTI 320 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~ 320 (374)
+.+.++++.+.+.+.|+. +++ .....+ .|.++|+.++. .. +..++++.|+ +.||.+.|+. .++
T Consensus 289 ~~~~~~~r~~~~~~~L~~----~~~-~~~~~p~gg~~~~~~~~~~~~---~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~ 360 (384)
T PRK06348 289 IKEEFQKRLEYAYKRIES----IPN-LSLHPPKGSIYAFINIKKTGL---SSVEFCEKLLKEAHVLVIPGKAFGESGEGY 360 (384)
T ss_pred HHHHHHHHHHHHHHHHhc----CCC-ceeccCCeeEEEEEecccCCC---CHHHHHHHHHHhCCEEEcCchhhccCCCCe
Confidence 333344444444444433 222 222233 45667888763 22 5788999987 5699998853 479
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
+|+++ ..+++++++++++|++.
T Consensus 361 iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 361 IRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEEe--cCCHHHHHHHHHHHHhh
Confidence 99995 46888999999988753
No 111
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=219.20 Aligned_cols=318 Identities=15% Similarity=0.180 Sum_probs=220.9
Q ss_pred hHHHHHHHhc-cc--cCcCCCCCcHHHHHHHHhcccC-----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEE
Q 017259 2 KALQEQAEKL-TL--SSRAFYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAII 73 (374)
Q Consensus 2 ~a~~~~~~~~-~~--~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~v 73 (374)
+++++.+... .+ +..++..++...|++.+++++| .++|++|.|+.+++..++..+ +.+| |+|
T Consensus 51 ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l-----~~~G-----DeV 120 (420)
T KOG0257|consen 51 EAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGL-----LNPG-----DEV 120 (420)
T ss_pred HHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHH-----cCCC-----CEE
Confidence 4555555442 22 2234667777789999998663 357999999999999999988 6777 999
Q ss_pred EEeccCCCCcccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHH
Q 017259 74 VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK 152 (374)
Q Consensus 74 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~ 152 (374)
|+++|.|..+......+++.+.+...- +..-++..-.+ .|.+++|.+++ ++|+++++++++||+|.+. ++++|+
T Consensus 121 ii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~~~s~~~~~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvf-sReeLe 195 (420)
T KOG0257|consen 121 IVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGNVSSSDWTLDPEELESKIT---EKTKAIILNTPHNPTGKVF-SREELE 195 (420)
T ss_pred EEecCcchhhhhHHhhcCCcceeeccc-cccccccCccccCChHHHHhhcc---CCccEEEEeCCCCCcCccc-CHHHHH
Confidence 999999999988888888776655322 11111111111 28999999998 7899999999999999998 899999
Q ss_pred HHHHHHHhcCCEEEEeccccCCcccccC---cccc--cCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCC
Q 017259 153 AVRDLCSKYNILMIADEIQSGLARSGRM---LASD--WEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGS 226 (374)
Q Consensus 153 ~l~~l~~~~~i~li~Dea~~~~~~~g~~---~~~~--~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~ 226 (374)
+|+++|++||+++|.||+|..+.+.|.. ++.. .++....+.|+||.++ .|| |+||+++++.+...+.+.....
T Consensus 196 ~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGW-rlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 196 RIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGW-RLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeee-eeeeeechHHhhhhHHHHhhcc
Confidence 9999999999999999999876666642 1211 1222334558999999 699 9999999999998888877777
Q ss_pred CCCCCHHHHHHHHHHHHHHhh----------hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-
Q 017259 227 TFGGNPLASAVAIASLDVIRD----------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL- 295 (374)
Q Consensus 227 ~~~~~~~~~~aa~~al~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 295 (374)
++..++..+.|..+++..-.. .++.+.++++++.+.+.|.+++ +....+..+.|.|.+++....
T Consensus 275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg-----~~v~~p~gayyl~adfs~~~~~ 349 (420)
T KOG0257|consen 275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG-----LKVTGPEGAYYLWADFSLAKSW 349 (420)
T ss_pred ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-----CccccCCCceEEEEeccccccC
Confidence 887788888887777665331 1355667777777777777763 222223345566666651110
Q ss_pred ----c----hhHHHHHHHHHHC-CeEeccCC-----------CCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 296 ----P----VSAYDICLKMKER-GILAKPTH-----------DTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 296 ----~----~~~~~~~~~l~~~-Gi~v~~~~-----------~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
+ .+...++..|.++ |+.+-|.. .+.+|++ ..-+++.++.+.+.|+
T Consensus 350 ~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~--~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 350 PFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFC--FCKADETLRKAIERLK 414 (420)
T ss_pred CcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHH--HHhhHHHHHHHHHHHh
Confidence 0 1233567777654 77776642 2344554 4445556666666655
No 112
>PLN02187 rooty/superroot1
Probab=99.96 E-value=3e-27 Score=226.11 Aligned_cols=305 Identities=13% Similarity=0.118 Sum_probs=194.8
Q ss_pred CCcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 20 NDKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.....++++.+++++ ..+++++|+|+++++..++.++ .++| |+|++.+|+|.++...+...+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-----~~pG-----d~Vlv~~P~y~~y~~~~~~~g 176 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESL-----ARPN-----ANILLPRPGFPHYDARAAYSG 176 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEEeCCCCccHHHHHHHcC
Confidence 444444555555543 4568999999999999999988 5677 999999999987654443333
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
...... ...+. .+.. .|+++++++++ ++++++++.+++||+|.+. +++.+++|.++|++||++||+||+|
T Consensus 177 ~~~~~~-~l~~~-~~~~----~d~~~l~~~~~---~~~~~v~i~nP~NPTG~v~-s~e~l~~i~~~a~~~~i~iI~DE~Y 246 (462)
T PLN02187 177 LEVRKF-DLLPE-KEWE----IDLEGIEAIAD---ENTVAMVVINPNNPCGNVY-SHDHLKKVAETARKLGIMVISDEVY 246 (462)
T ss_pred CEEEEE-eCccc-cCCc----cCHHHHHHhcC---CCcEEEEEeCCCCCCCCcc-CHHHHHHHHHHHHHCCCEEEEeccc
Confidence 211111 00000 0011 17889988776 4677788877889999877 8999999999999999999999999
Q ss_pred cCCcccccCc-ccccCCCCCcE---EEeccccc-CCccchhhheeC-H-HH---HhhcCCCCCCCCC--CCCHHHHHHHH
Q 017259 172 SGLARSGRML-ASDWEEVRPDM---VILGKALG-GGVIPVSAVLAD-K-EV---MLCIQPGEHGSTF--GGNPLASAVAI 239 (374)
Q Consensus 172 ~~~~~~g~~~-~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~-~-~~---~~~~~~~~~~~~~--~~~~~~~~aa~ 239 (374)
.++.+.+..+ ....+.-...+ -||||.++ +|+ |+||++++ + .+ .+.+........+ +.+.+.+.++.
T Consensus 247 ~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl-RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~ 325 (462)
T PLN02187 247 DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW-KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALP 325 (462)
T ss_pred cccccCCCCceeHHHhccCCcEEEEecchhhcCCccc-eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHH
Confidence 9865444322 22111111122 38999977 799 99998873 3 22 2233322122222 45788898888
Q ss_pred HHHHHHhhhcHH----HHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCC-Cc-hhHHHHHHH-HHHCCe
Q 017259 240 ASLDVIRDEKLA----ERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTA-LP-VSAYDICLK-MKERGI 311 (374)
Q Consensus 240 ~al~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~-~~~~~~~~~-l~~~Gi 311 (374)
++++.. .+++. +.++++++.+.+.|++ ++..... .+..+.|+|+.++... .+ .+..+++.. +.++||
T Consensus 326 ~~L~~~-~~~~l~~~~~~l~~~r~~l~~~L~~----~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV 400 (462)
T PLN02187 326 AILEKA-DKNFFAKKNKILKHNVDLVCDRLKD----IPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENL 400 (462)
T ss_pred HHHhcC-cHHHHHHHHHHHHHHHHHHHHHHhh----CCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCE
Confidence 888631 12333 4444445555555543 3222211 2345688887664210 00 024455554 578899
Q ss_pred EeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 312 LAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 312 ~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
.+.|+. .+++||++. ..++.+++++++|.++++ ...+..
T Consensus 401 ~v~pG~~fg~~~~iRis~~--~~~e~l~~al~rL~~~l~-~~~~~~ 443 (462)
T PLN02187 401 VFLPGDALGLKNWMRITIG--VEAHMLEDALERLKGFCT-RHAKKT 443 (462)
T ss_pred EEECccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-Hhhhcc
Confidence 999863 689999954 578999999999999997 664443
No 113
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=2.7e-27 Score=216.41 Aligned_cols=303 Identities=22% Similarity=0.284 Sum_probs=228.0
Q ss_pred hHHHHHHHhc-ccc-Cc---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKL-TLS-SR---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~-~~~-~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++. ... .+ .+..+.+.+||++|++++|.+.+++.+||-.|+..++..+ .++| |.|+..
T Consensus 60 ~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l-----~~~~-----dli~~D 129 (388)
T COG0156 60 EAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSAL-----LKKG-----DLIFSD 129 (388)
T ss_pred HHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHh-----cCCC-----cEEEEe
Confidence 5677777763 222 22 2778999999999999999999999999999999999999 4445 666655
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC--C-cEEEEEEccccCCCCcccCChhHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--D-QIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~-~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
.-. |........++. .....+.++|+++||+.|++.. . +.+.|+++.++++.|.+.| |++
T Consensus 130 ~ln-HASiidG~rls~------------a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~ 192 (388)
T COG0156 130 ELN-HASIIDGIRLSR------------AEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPE 192 (388)
T ss_pred chh-hhhHHHHHHhCC------------CcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHH
Confidence 554 665555444443 4567778899999999998732 1 4789999999999999999 999
Q ss_pred HHHHHHhcCCEEEEecccc-C-CcccccCcccccCCCCC---cE--EEecccccCCccchhhheeCHHHHhhcCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---DM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS 226 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~~~---d~--~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~ 226 (374)
|++++++|+.++++||+|+ | +|..|..+. .+.+..+ |+ .||||++|+ -.|++.++..+.+.+.......
T Consensus 193 l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~-e~~g~~~~~vdi~~gTlsKAlGs---~Gg~v~g~~~~~d~L~~~ar~~ 268 (388)
T COG0156 193 LVELAEKYGALLYVDEAHAVGVLGPNGRGLA-EHFGLEPEEVDIIVGTLGKALGS---SGGYIAGSAALIDYLRNRARPF 268 (388)
T ss_pred HHHHHHHhCcEEEEEccccccccCCCCccHH-HHhCCCCccceEEEEEchhhhcc---cCceeeCcHHHHHHHHHhCCce
Confidence 9999999999999999998 4 465666543 3344432 33 399999992 2345889999999888755544
Q ss_pred CC--CCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHH
Q 017259 227 TF--GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 303 (374)
Q Consensus 227 ~~--~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (374)
.| +.+|...+++.++++.+.+. +.+++++++..++++.++... +.. ......++.+.+.+.. .+.++.
T Consensus 269 ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~-----~~~-~~s~s~I~pv~~gd~~---~a~~~s 339 (388)
T COG0156 269 IFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG-----LVL-LPSESPIIPVILGDEE---RALEAS 339 (388)
T ss_pred eccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC-----Ccc-CCCCCCeeeeEeCCHH---HHHHHH
Confidence 44 55777778899999998764 678888888888885555432 211 2334455656565543 688999
Q ss_pred HHHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 304 LKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 304 ~~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
..|+++||.+.+- +...+|++++..+|++|++.++++|.++
T Consensus 340 ~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 340 RALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 9999999998642 3478999999999999999999998764
No 114
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=1.6e-27 Score=224.05 Aligned_cols=294 Identities=16% Similarity=0.179 Sum_probs=198.3
Q ss_pred CCCCcHHHHHHHHhcccCC-----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~-----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++.+++++++.+|. +++++|+|+++++..++..+ ..+| |+|++..|+|..+.......+.
T Consensus 67 G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~ 136 (384)
T PRK12414 67 GIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL-----VHPG-----DEVIYFEPSFDSYAPIVRLQGA 136 (384)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh-----cCCC-----CEEEEeCCCccchHHHHHHcCC
Confidence 3445666777777776654 47999999999999999887 5667 9999999999765544443322
Q ss_pred CccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
..... +... -.+ -|++.++++++ ++++++++++++|++|.+. +++.+++|.++|++||+++|+||+|
T Consensus 137 ~~~~v----~~~~----~~~~~d~~~l~~~l~---~~~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y 204 (384)
T PRK12414 137 TPVAI----KLSP----EDFRVNWDEVAAAIT---PRTRMIIVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVY 204 (384)
T ss_pred EEEEE----ecCc----cccccCHHHHHhhcC---cccEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhh
Confidence 11110 1100 011 27888888886 4788899988899999877 7999999999999999999999999
Q ss_pred cCCcccccCc-cc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 172 SGLARSGRML-AS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 172 ~~~~~~g~~~-~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
..+.+.+... .. ...+.... +.||||.++ +|+ |+||+++++++++.+........++.+.+++.++..+++.-
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~ 283 (384)
T PRK12414 205 EHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEP 283 (384)
T ss_pred hhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCC
Confidence 9765444221 11 11122222 238999997 899 99999999998888876544456778888988887777531
Q ss_pred hh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCCchhHHHHH-HHHHHCCeEeccCC-----
Q 017259 246 RD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDIC-LKMKERGILAKPTH----- 317 (374)
Q Consensus 246 ~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~----- 317 (374)
.. ....+.++++++.+.+.|++. ++. ..++ .+.++|+.++... .....+++ +.|.++||.+.|+.
T Consensus 284 ~~~~~~~~~~~~~r~~l~~~L~~~-----g~~-~~~~~gg~~~~~~~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~f~~~ 356 (384)
T PRK12414 284 ASYLGLGAFYQRKRDLLARELAGS-----RFE-LLPSEGSFFMLARFRHFS-DESDSDFVLRLIRDARVATIPLSAFYTD 356 (384)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-----CCe-ecCCCcceEEEEcccccC-CCCHHHHHHHHHHhCCEEEecchhhcCC
Confidence 10 123445555555555555543 221 1223 3456665664310 00244566 55667899998852
Q ss_pred ---CCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 318 ---DTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 318 ---~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
.+++||+++ .+++++++++++|.+
T Consensus 357 ~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 357 GTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred CCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 468999955 478999999998864
No 115
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=2.3e-27 Score=223.30 Aligned_cols=294 Identities=14% Similarity=0.149 Sum_probs=201.6
Q ss_pred CCCCcHHHHHHHHhcccCC-----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~-----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++.+++++.+.++. +++++|+|+++|+..++..+ ..+| |+|++.+|+|.++.......+.
T Consensus 68 G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-----~~~g-----d~Vli~~p~y~~~~~~~~~~g~ 137 (386)
T PRK09082 68 GVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-----VRPG-----DEVIVFDPSYDSYAPAIELAGG 137 (386)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-----cCCC-----CEEEEeCCCchhhHHHHHHcCC
Confidence 3344566777777776553 26999999999999999887 4567 9999999999776555444332
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..... +. +.... ..|++++++.++ ++++++++++++|++|.+. +++.+++|.++|++||+++|+||+|.
T Consensus 138 ~~~~~----~~--~~~~~-~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~ 206 (386)
T PRK09082 138 RAVRV----AL--QPPDF-RVDWQRFAAAIS---PRTRLIILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYE 206 (386)
T ss_pred EEEEE----ec--Ccccc-cCCHHHHHHhcC---ccceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhh
Confidence 21111 10 00000 027888988886 4688888888889999877 79999999999999999999999998
Q ss_pred CCcccccC-ccc-ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 173 GLARSGRM-LAS-DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 173 ~~~~~g~~-~~~-~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
++.+.+.. ... ...+.... +.||||.++ +|+ |+||+++++++++.++.......++.+.+++.++.+.++...
T Consensus 207 ~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 285 (386)
T PRK09082 207 HIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW-KVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEP 285 (386)
T ss_pred hhccCCCCCCChhhCcCccCcEEEEeechhhccchhh-hhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCCh
Confidence 76443321 111 12222223 238999997 799 999999999998888765445567788888887776664211
Q ss_pred h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc--CCCchhHHHHHHHHH-HCCeEeccCC----
Q 017259 247 D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--TALPVSAYDICLKMK-ERGILAKPTH---- 317 (374)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~l~-~~Gi~v~~~~---- 317 (374)
. +++.+.++++.+.+.+.|+.. ++.......+.++|+.+++ .. +..++++.|. ++||.+.|+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~l~~~~~v~v~pg~~f~~ 357 (386)
T PRK09082 286 EHYLELPAFYQAKRDRFRAALANS-----RFKLLPCEGTYFQLVDYSAISDL---DDVEFCQWLTREHGVAAIPLSVFYA 357 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCeeEEEEEeccccCCC---CHHHHHHHHHHhCCEEEeCcHHhCC
Confidence 1 123344455555555555542 2221123346677878763 22 5788999874 6799998752
Q ss_pred ----CCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 318 ----DTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 318 ----~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
.+++||+++ .+++++++++++|++
T Consensus 358 ~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 358 DPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred CCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 478999954 578899999998864
No 116
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.9e-27 Score=222.87 Aligned_cols=306 Identities=14% Similarity=0.122 Sum_probs=201.8
Q ss_pred CCCCcHHHHHHHHhccc----CCC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMF----GYD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+...+++.+++++.+.+ ..+ ++++|+|+++++..++.++ ..+| |.|++.+|+|.++...+...+.
T Consensus 72 G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~ 141 (403)
T PRK08636 72 GIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAI-----TNPG-----DVAIVPDPAYPIHSQAFILAGG 141 (403)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHhcCC
Confidence 33345666777765543 345 6999999999999999988 5667 9999999999887655554443
Q ss_pred CccccccCCCCCCCceeccCCCHH----HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDIT----ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~----~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
..... +...+-. .. -|++ .++++++++.++++++++++++||+|.+. |.+.+++|.++|++|+++||+|
T Consensus 142 ~~~~v----~~~~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~II~D 214 (403)
T PRK08636 142 NVHKM----PLEYNED-FE-LDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATV-EKSFYERLVALAKKERFYIISD 214 (403)
T ss_pred EEEEE----ecccccc-Cc-cChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEe
Confidence 21111 0000000 00 1444 45666766556788999988899999887 8999999999999999999999
Q ss_pred ccccCCcccccC-cccccCCCCCc----EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Q 017259 169 EIQSGLARSGRM-LASDWEEVRPD----MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASL 242 (374)
Q Consensus 169 ea~~~~~~~g~~-~~~~~~~~~~d----~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al 242 (374)
|+|.++.+.+.. .........++ +.||||.++ +|+ |+||+++++++++.+........++.+.+.+.++..++
T Consensus 215 e~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~ 293 (403)
T PRK08636 215 IAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW-RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIAL 293 (403)
T ss_pred ccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc-eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHH
Confidence 999987544422 11111111112 237999996 899 99999999999888775433334566677777666554
Q ss_pred HHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC----
Q 017259 243 DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH---- 317 (374)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~---- 317 (374)
+. .+++.+++++.....++.+.+..... ++....+..|.++|+.+++.....+..++++.++ +.||.+.|+.
T Consensus 294 ~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~ 370 (403)
T PRK08636 294 DG--DQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGE 370 (403)
T ss_pred hC--cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCc
Confidence 31 12334333333333333333333222 2211223468888988875321113578888766 6799998862
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++. .+++++++++++|+++++
T Consensus 371 ~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~ 399 (403)
T PRK08636 371 YGDEYVRIALI--ENENRIRQAARNIKKFLK 399 (403)
T ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 479999964 688999999999999987
No 117
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=2.4e-27 Score=224.26 Aligned_cols=296 Identities=12% Similarity=0.136 Sum_probs=200.1
Q ss_pred CcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++.+.+.+| .+ ++++|+|+++++..++..+ ..+| |.|++.+|+|.++...+...+....
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l-----~~~g-----d~Vl~~~P~y~~~~~~~~~~g~~v~ 141 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAI-----TAPG-----DVILCPNPSYPIHAFGFIMAGGVIR 141 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHh-----cCCC-----CEEEEcCCCCcccHHHHHhcCCEEE
Confidence 444455555544323 45 7999999999999999888 5567 9999999999887555443322111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+. .+++++++.++.+.++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.
T Consensus 142 ~v----~~~~~~-----~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~ 211 (405)
T PRK09148 142 SV----PAEPDE-----EFFPALERAVRHSIPKPIALIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIY 211 (405)
T ss_pred EE----eCCCCC-----CCccCHHHHHhhccccceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhh
Confidence 00 110100 124456666655445788898888899999887 89999999999999999999999999764
Q ss_pred ccccCcc-cccC-CCC---CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 017259 176 RSGRMLA-SDWE-EVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 249 (374)
Q Consensus 176 ~~g~~~~-~~~~-~~~---~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~ 249 (374)
+.+..+. .... +.. ..+-||||.++ +|+ |+||+++++++++.+.......+++.+.+++.++..+++. .++
T Consensus 212 ~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~ 288 (405)
T PRK09148 212 FDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQD 288 (405)
T ss_pred cCCCCCCChhhCCCccCcEEEEeccccccCCcch-heeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHH
Confidence 4332211 1111 111 12348999999 899 9999999999988887544444567788888888877752 123
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------C
Q 017259 250 L----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------D 318 (374)
Q Consensus 250 ~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~ 318 (374)
+ ++.++++.+.+.+.|+.. ++....+..|.++|+.++.........++++.|+ ++||.+.|+. .
T Consensus 289 ~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~ 363 (405)
T PRK09148 289 CIAEMRELYKKRRDVLVESFGRA-----GWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGD 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-----CCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 3 344444455554444432 2221223457788888865321113578888876 6899999852 4
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++||++. .+.+++++++++|.++++
T Consensus 364 ~~~Ri~~~--~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 364 GYVRIALV--ENEQRIRQAARNIKRFLS 389 (405)
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 79999954 678999999999998887
No 118
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=3.5e-27 Score=222.98 Aligned_cols=308 Identities=19% Similarity=0.228 Sum_probs=215.5
Q ss_pred hHHHHHHHhc-cc-cCcC---CCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKL-TL-SSRA---FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~-~~-~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+. .. ..+. +..+.+.++++.+++++|.+++++++||++|+..++..+ .++| |+|++.
T Consensus 59 ~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l-----~~~g-----d~vi~~ 128 (393)
T TIGR01822 59 QAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETL-----LGAE-----DAIISD 128 (393)
T ss_pred HHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHh-----CCCC-----CEEEEe
Confidence 4566666652 22 2233 335567889999999999998988999999999888776 5677 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
++.|++........... ...+...|++++++.+++. +.++++++++++++++|.+.+ +++
T Consensus 129 ~~~~~s~~~~~~~~~~~-------------~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~ 191 (393)
T TIGR01822 129 ALNHASIIDGVRLCKAK-------------RYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDE 191 (393)
T ss_pred ccccHHHHHHHHhcCCc-------------eEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHH
Confidence 99876654433222211 1122346899999998852 227889999989999999988 999
Q ss_pred HHHHHHhcCCEEEEecccc-CC-cccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 227 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~-~~-~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~ 227 (374)
|.++|++||++||+||+|+ |+ +..|.. .....+. .+|++ |+||+++ |+ ++||+++++++.+.+........
T Consensus 192 i~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~~~di~~~s~sK~l~-g~-r~G~~~~~~~~~~~l~~~~~~~~ 268 (393)
T TIGR01822 192 ICDLADKYDALVMVDECHATGFLGPTGRG-SHELCGVMGRVDIITGTLGKALG-GA-SGGFTTARKEVVELLRQRSRPYL 268 (393)
T ss_pred HHHHHHHcCCEEEEECCccccCcCCCCCc-hHHhcCCCCCCeEEEEEChHHhh-CC-CcEEEEeCHHHHHHHHHhCccce
Confidence 9999999999999999996 32 222221 1112222 34555 8899987 46 88999999988887765322222
Q ss_pred C--CCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 228 F--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 228 ~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
+ +.++..++++.++++.+.. ++..++++++.+++.+.|++.... .. .+.+.++.+.+++.. ...++++
T Consensus 269 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~~---~~~~~~~~i~~~~~~---~~~~l~~ 339 (393)
T TIGR01822 269 FSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGFD---IK---PADHPIIPVMLYDAV---LAQRFAR 339 (393)
T ss_pred ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---CC---CCCCCEEEEEeCCHH---HHHHHHH
Confidence 3 3355556677778876643 356788888888888888764211 11 112345555444322 5778999
Q ss_pred HHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 305 KMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 305 ~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.|.++||.+... +...+|++++..++++|+++++++|+++++ ++
T Consensus 340 ~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~-~~ 390 (393)
T TIGR01822 340 RLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR-EL 390 (393)
T ss_pred HHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999988631 235799999999999999999999999887 44
No 119
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.7e-27 Score=222.33 Aligned_cols=301 Identities=16% Similarity=0.139 Sum_probs=197.3
Q ss_pred CCcHHHHHHHHhccc----C----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 20 NDKFPVFAERLTSMF----G----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~----~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.....++++.+++++ | .+++++|+|+++++..++..+ ..+| ++|++.+|+|.+....+...+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----~~Vlv~~p~y~~~~~~~~~~g 138 (391)
T PRK08361 69 NAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESL-----LEEG-----DEVIIPDPAFVCYVEDAKIAE 138 (391)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEcCCCCcccHHHHHHcC
Confidence 334455555555543 3 468999999999999998877 5567 999999999977654433322
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.... .. +...+... ..|++++++.++ ++++++++++++|++|.+. +.+.+++|.++|+++++++|+||+|
T Consensus 139 ~~~~-~v---~~~~~~~~--~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y 208 (391)
T PRK08361 139 AKPI-RI---PLREENEF--QPDPDELLELIT---KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPY 208 (391)
T ss_pred CEEE-EE---ecCCccCC--CCCHHHHHHhcc---cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEccc
Confidence 1111 10 11010000 027889988887 4678888888889999877 7899999999999999999999999
Q ss_pred cCCcccccC-cccccCCCCCc--EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 172 SGLARSGRM-LASDWEEVRPD--MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 172 ~~~~~~g~~-~~~~~~~~~~d--~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.++.+.+.. ........... +.||||.++ +|+ |+||+++++++++.+........++.+.+.+.++..+++....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 287 (391)
T PRK08361 209 EHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGW-RLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES 287 (391)
T ss_pred ccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHh-hhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc
Confidence 976443321 11111111112 238999998 799 9999999988888775433334456677888888777753211
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CCCchhHHHHHHHHHH-CCeEeccCC------CC
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKMKE-RGILAKPTH------DT 319 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~ 319 (374)
+++.++.++..+..++.+.+....++++....+..+.++|+.++. .. +..++++.|++ +||.+.|+. ++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~---~~~~l~~~l~~~~gv~v~pg~~f~~~~~~ 364 (391)
T PRK08361 288 WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGM---SSEDFAEWLLEKARVVVIPGTAFGKAGEG 364 (391)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCC---CHHHHHHHHHHhCCEEEcCchhhCCCCCC
Confidence 123334333333333333333333333221122335677777764 22 57789998875 799998852 47
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 320 IVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 320 ~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++||+++ .+++++++++++|+++++
T Consensus 365 ~iRi~~~--~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 365 YIRISYA--TSKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 9999955 578899999999999887
No 120
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.6e-27 Score=219.80 Aligned_cols=283 Identities=13% Similarity=0.073 Sum_probs=191.3
Q ss_pred CCCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 17 AFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.|+.+.+.+|.+.++++++. ++|++|+|+++++..++.++ .+ +++++.+|+|..+...+...+..
T Consensus 36 ~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~------~~------~~vv~~~P~y~~y~~~~~~~G~~- 102 (332)
T PRK06425 36 IYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI------NV------GNIIIVEPNFNEYKGYAFTHGIR- 102 (332)
T ss_pred cCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh------CC------CcEEEeCCChHHHHHHHHHcCCe-
Confidence 46777899999999998854 57999999999999888643 12 34666699998776666555432
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
+..++.++.+...+.++. .+++++++++++||||.+. +.+.+++|.++|++||++||+||+|.+|
T Consensus 103 ------------v~~vp~~~~~~~~~~l~~--~~~k~v~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~DE~Y~~~ 167 (332)
T PRK06425 103 ------------ISALPFNLINNNPEILNN--YNFDLIFIVSPDNPLGNLI-SRDSLLTISEICRKKGALLFIDEAFIDF 167 (332)
T ss_pred ------------EEEEeCCcccCcHHHHhh--cCCCEEEEeCCCCCcCCcc-CHHHHHHHHHHHHHcCCEEEEecchhcc
Confidence 222222210000223332 2677888888999999887 8999999999999999999999999988
Q ss_pred cccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-hhhc
Q 017259 175 ARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-RDEK 249 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-~~~~ 249 (374)
...+...........++++ ||||.++ +|+ |+||+++++++++.+... ..++..+.+++.++. ..+.- ..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~li~~l~~~--~~~~~~~~~~~~~l~-~~~~~~~~~~ 243 (332)
T PRK06425 168 VPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYNMKISRKI--TEPWSVCDPAIDFIR-SIDLDYVAKH 243 (332)
T ss_pred ccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHHHHHHHHc--CCCCccCHHHHHHHH-HhhhHHHHHH
Confidence 5433211111112223333 9999999 899 999999999998888753 233444444433222 11110 0013
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEE
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRL 323 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi 323 (374)
..+.++++++++.+.|++. ++....++.|+|+|+.++ +..++++.|+++||.++++. .+++||
T Consensus 244 ~~~~~~~~r~~l~~~L~~~-----g~~~~~~~~g~f~~~~~~------~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRi 312 (332)
T PRK06425 244 SLDIMENERSYLINNLEAM-----GFRAAGDPSANFITFMIP------DAHDFYSYLLKNGILVRLLDDYECLGEQYIRI 312 (332)
T ss_pred HHHHHHHHHHHHHHHHHHC-----CCEECCCCCceEEEEEcC------CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEE
Confidence 3455555666666666543 222112346788888775 35789999999999998862 469999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q 017259 324 TPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+ ..+.+++++++++|++++
T Consensus 313 s---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 313 A---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred E---eCCHHHHHHHHHHHHHHh
Confidence 9 557889999999998876
No 121
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.3e-27 Score=222.20 Aligned_cols=302 Identities=15% Similarity=0.167 Sum_probs=199.2
Q ss_pred CcHHHHHHHHhcccC-----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 21 DKFPVFAERLTSMFG-----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~-----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.+++.+++++.+.+| .+ ++++|+|+++++..++.++ ..+| |.|++..|+|.++...+...+...
T Consensus 85 ~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~v 154 (410)
T PRK06290 85 EFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCF-----INPG-----DVTLMTVPGYPVTGTHTKYYGGEV 154 (410)
T ss_pred HHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHh-----CCCC-----CEEEEeCCCCccHHHHHHHcCCEE
Confidence 334445555444333 34 6999999999999998887 5677 999999999988765554443321
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +...+... ..|++++++++. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++
T Consensus 155 ~~v----~~~~~~~~--~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~ 224 (410)
T PRK06290 155 YNL----PLLEENNF--LPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAAL 224 (410)
T ss_pred EEE----ecCCCcCC--cCCHHHHHHhhc---ccceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhc
Confidence 111 11111011 127888888775 4688999988889999888 8999999999999999999999999976
Q ss_pred cccccCccc-ccCCCC---CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hh
Q 017259 175 ARSGRMLAS-DWEEVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DE 248 (374)
Q Consensus 175 ~~~g~~~~~-~~~~~~---~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~ 248 (374)
.+.+....+ ...+.. ..+.||||.++ +|+ |+||+++++++++.+.........+.+.+++.++..+++... .+
T Consensus 225 ~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl-RiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~ 303 (410)
T PRK06290 225 TFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW-RLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITE 303 (410)
T ss_pred eeCCCCcChhcCCCccccEEEEeechhhcCCchh-heEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHH
Confidence 443322121 111111 12349999997 799 999999999988888754434444556677777777775311 01
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----chhHHHHHHHHHHCC-eEeccCC--CCEE
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAYDICLKMKERG-ILAKPTH--DTIV 321 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~l~~~G-i~v~~~~--~~~l 321 (374)
+..++++++.+.+.+.|++. ++.......+.++|+.+++... ..+..+++++|+++| +.+.|+. ++++
T Consensus 304 ~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~l 378 (410)
T PRK06290 304 KIREKYSRRLDKLVKILNEV-----GFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFL 378 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhC-----CCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeE
Confidence 33444555555555555443 2221112235566777764310 015678999999886 4555542 4699
Q ss_pred EEecCC-CCCHHHHHHHHHHHHHHHhccC
Q 017259 322 RLTPPL-SISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 322 Ri~~~~-~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
||+++. ..++++.++++++|++.+. ++
T Consensus 379 Ri~~~~~~~~~~~~~~~~~~l~~~~~-~~ 406 (410)
T PRK06290 379 RFSVTFEAKDEEEEDRILEEIKRRLS-DV 406 (410)
T ss_pred EEEEEcccccccchhHHHHHHHHHHh-hc
Confidence 999542 3488899999999999987 54
No 122
>PRK07505 hypothetical protein; Provisional
Probab=99.96 E-value=3e-27 Score=223.64 Aligned_cols=309 Identities=18% Similarity=0.215 Sum_probs=206.4
Q ss_pred hHHHHHHHhcc---ccCc--CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLT---LSSR--AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~---~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++.. ..++ .+..+..++++++|+++++. +.++++||++|++.+++++.... ..+ ++..++++
T Consensus 67 ~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~-~~~----~~~~vi~~ 140 (402)
T PRK07505 67 EGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGH-LTG----GVPPHMVF 140 (402)
T ss_pred HHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcc-cCC----CCCCEEEE
Confidence 67888887643 2222 14467889999999999887 77777789999999999875321 111 23568889
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 156 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~ 156 (374)
+.+||+....... .... ..++..++++|+++++++++.+ ...+++++|+ +++|.+.+ +++|.+
T Consensus 141 ~~~~H~s~~~~~~------~~~~----~~~v~~~~~~d~~~l~~~~~~~--~~~~vl~~p~-~~~G~~~~----~~~i~~ 203 (402)
T PRK07505 141 DKNAHASLNILKG------ICAD----ETEVETIDHNDLDALEDICKTN--KTVAYVADGV-YSMGGIAP----VKELLR 203 (402)
T ss_pred chhhhHhHHhhhh------hhhc----CCeEEEeCCCCHHHHHHHHhcC--CCEEEEEecc-cccCCcCC----HHHHHH
Confidence 9999984322111 1110 1356677888999999988632 3455555554 56787887 999999
Q ss_pred HHHhcCCEEEEecccc--CCcccccCcccccCCC-CCcE-E---EecccccCCccchhhhe-eCHHHHhhcCCCCCCCCC
Q 017259 157 LCSKYNILMIADEIQS--GLARSGRMLASDWEEV-RPDM-V---ILGKALGGGVIPVSAVL-ADKEVMLCIQPGEHGSTF 228 (374)
Q Consensus 157 l~~~~~i~li~Dea~~--~~~~~g~~~~~~~~~~-~~d~-~---s~sK~~~~G~~~~G~~~-~~~~~~~~~~~~~~~~~~ 228 (374)
+|++||++||+||+|+ ++++.|..+....++. .+|. + |+||+++++ +|+++ .++++.+.+.......+|
T Consensus 204 l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~---Gg~~~~~~~~~~~~~~~~~~~~t~ 280 (402)
T PRK07505 204 LQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS---GGVIMLGDAEQIELILRYAGPLAF 280 (402)
T ss_pred HHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc---CeEEEeCCHHHHHHHHHhCCCcee
Confidence 9999999999999994 5777776555555554 4553 3 899998843 25555 467888877665555566
Q ss_pred CC--CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeE-EEEeccCCCchhHHHHHHH
Q 017259 229 GG--NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTALPVSAYDICLK 305 (374)
Q Consensus 229 ~~--~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 305 (374)
++ ++++++++.++++.+.++.+.+.. +++++.++.+.... ....++.+.++ ++.+++.. ...++.+.
T Consensus 281 ~~~~~~~a~aa~~a~l~~~~~~~~~~~~----~~l~~~~~~~~~~~---~~~~~g~~~~i~~~~~~~~~---~~~~~~~~ 350 (402)
T PRK07505 281 SQSLNVAALGAILASAEIHLSEELDQLQ----QKLQNNIALFDSLI---PTEQSGSFLPIRLIYIGDED---TAIKAAKQ 350 (402)
T ss_pred CCCCCHHHHHHHHHHHHHHhccCcHHHH----HHHHHHHHHHHHHH---HhcCCCCCCCEEEEEeCCHH---HHHHHHHH
Confidence 44 567888888888865544333222 22333322221110 01123333333 22233211 46789999
Q ss_pred HHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 306 MKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 306 l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+++||++++. +.+++|+++++.++++|+++++++|+++++
T Consensus 351 l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 351 LLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 99999999864 236999999999999999999999999886
No 123
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=4.9e-27 Score=221.88 Aligned_cols=292 Identities=14% Similarity=0.103 Sum_probs=197.6
Q ss_pred CCCCcHHHHHHHHhcccC-----CC-eEEecCChHHHHHHHHHHHHHcccccc---cCCCCccEEEEeccCCCCcccccc
Q 017259 18 FYNDKFPVFAERLTSMFG-----YD-MVLPMNTGAEGVETALKLARKWGYVKK---KFSIDEAIIVSCCGCFHGRTLAAI 88 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~-----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~---G~~~~~~~vi~~~~~yhg~~~~~~ 88 (374)
+..++++.+++++.+.+| .+ ++++|+|+++++..+++++ ..+ | |.|++..|+|.++...+.
T Consensus 66 G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l-----~~~~~~g-----d~vlv~~P~y~~~~~~~~ 135 (396)
T PRK09147 66 GLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTV-----IDRDGPG-----PLVVCPNPFYQIYEGAAL 135 (396)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHH-----cCCCCCC-----CEEEEcCCCccchHHHHH
Confidence 334456666666655444 23 7999999999999999988 445 5 899999999987765544
Q ss_pred cccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 89 SMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
..+...... |...+..+ ..|++++++.+. ++++++++++++||+|.+. +++.+++|.++|++||++||+|
T Consensus 136 ~~g~~~~~v----p~~~~~~~--~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~D 205 (396)
T PRK09147 136 LAGAEPYFL----NCDPANNF--APDFDAVPAEVW---ARTQLLFVCSPGNPTGAVL-PLDDWKKLFALSDRYGFVIASD 205 (396)
T ss_pred hcCCEEEEe----ccCccccC--ccCHHHHHHHHh---hccEEEEEcCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEee
Confidence 433221111 11110000 026888887775 3688888888899999877 8999999999999999999999
Q ss_pred ccccCCccccc--Ccc-cc---cCCC--CCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHH
Q 017259 169 EIQSGLARSGR--MLA-SD---WEEV--RPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 236 (374)
Q Consensus 169 ea~~~~~~~g~--~~~-~~---~~~~--~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (374)
|+|.++.+.+. ... .. ..+. .+.+ .||||.++ +|+ |+||+++++++++.+.......+++.+.+.+.
T Consensus 206 e~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~ 284 (396)
T PRK09147 206 ECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGL-RSGFVAGDAALLKKFLLYRTYHGCAMPPAVQA 284 (396)
T ss_pred ccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccc-eeeeecCCHHHHHHHHHHhhhcccCCCHHHHH
Confidence 99998644332 111 10 0111 1223 38999876 699 99999999998888765433345677888888
Q ss_pred HHHHHHHHHhhhcH----HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCe
Q 017259 237 VAIASLDVIRDEKL----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGI 311 (374)
Q Consensus 237 aa~~al~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi 311 (374)
++.+++. .+++ ++.++++.+.+.+.|+.. + ....+..|.++|++++ . +..++++.|+ ++||
T Consensus 285 a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~~---~---~~~~p~~g~f~~~~~~-~----~~~~~~~~ll~~~gv 350 (396)
T PRK09147 285 ASIAAWN---DEAHVRENRALYREKFDAVTPILAPV---L---DVQLPDAGFYLWAKVP-G----DDTEFARRLYADYNV 350 (396)
T ss_pred HHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHHh---c---CCCCCCeeEEEEEECC-C----CHHHHHHHHHHhCCE
Confidence 7776653 2222 334444444444444432 1 1113456888998887 2 4578888886 6799
Q ss_pred EeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 312 LAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 312 ~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.|+. .+++||++. .+++++++++++|+++++
T Consensus 351 ~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 351 TVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAERIVDFCR 395 (396)
T ss_pred EEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 997752 478999954 568899999999988764
No 124
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-27 Score=221.44 Aligned_cols=290 Identities=17% Similarity=0.204 Sum_probs=204.1
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...+|++.++++++. +++++++|+++++..++.++ .++| |.|++.+|+|.+....+...+..
T Consensus 64 Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~-----~~~g-----d~vlv~~p~y~~~~~~~~~~g~~-- 131 (369)
T PRK08153 64 YGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLY-----VEPG-----DPVVTSLGAYPTFNYHVAGFGGR-- 131 (369)
T ss_pred CCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEECCCcchHHHHHHHHcCCe--
Confidence 3344477899999998854 58999999999999998887 5567 99999999997765443333221
Q ss_pred ccccCCCCCCCceeccC----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 96 AIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
+..+++ .|++++++.+.. ++++++++++++||+|.+. +.+.+++|.++|+ ++++||+||+|
T Consensus 132 -----------~~~vp~~~~~~~~~~l~~~~~~--~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~-~~~~lI~DE~y 196 (369)
T PRK08153 132 -----------LVTVPYRDDREDLDALLDAARR--ENAPLVYLANPDNPMGSWH-PAADIVAFIEALP-ETTLLVLDEAY 196 (369)
T ss_pred -----------EEEeeCCCCCCCHHHHHHHhcc--cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEeCch
Confidence 112221 256776655542 4678888888899999887 7888888888877 49999999999
Q ss_pred cCCcccccCcccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 172 SGLARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.++.+.+...... ...+++ .||||.++ +|+ |+||+++++++++.+.... .+++.+.+++.++.++++ +
T Consensus 197 ~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~Gl-RiG~~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~ 268 (369)
T PRK08153 197 CETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAGA-RVGYAIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---D 268 (369)
T ss_pred hhhcCcccchhhh--hcCCCEEEEecchHhccCcch-heeeeecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---C
Confidence 9876544321111 123343 39999998 899 9999999999888876532 346789999999988885 2
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec-cC---CCCEEEE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-PT---HDTIVRL 323 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~-~~---~~~~lRi 323 (374)
+++.++.++..++.++.+.+..... ++. ..+..+.++++.++... ..+.++.++|.++||.++ ++ ..+++||
T Consensus 269 ~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~~p~~~~f~~~~~~~~~--~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRi 344 (369)
T PRK08153 269 QAYLAEVVGKIAAARDRIAAIARAN-GLT-PLPSATNFVAIDCGRDG--AFARAVLDGLIARDIFVRMPGVAPLDRCIRV 344 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCcCcEEEEECCCCc--ccHHHHHHHHHHCCeEEeeCCCCCCCCeEEE
Confidence 3445555555555555544444332 222 22455777777764211 157899999999999996 43 2479999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 324 TPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
++ .+++++++++++|++++. ..+
T Consensus 345 s~---~~~~~~~~~~~al~~~~~-~~~ 367 (369)
T PRK08153 345 SC---GPDEELDLFAEALPEALE-AAR 367 (369)
T ss_pred ec---CCHHHHHHHHHHHHHHHH-Hhh
Confidence 93 378999999999999987 553
No 125
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=7.2e-27 Score=217.12 Aligned_cols=294 Identities=15% Similarity=0.129 Sum_probs=193.8
Q ss_pred CcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++.+.+..| .+ ++++|+|+++++..++..+. .+| + +.|+|++..|+|.++...+...+....
T Consensus 40 ~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-----~~g-~-~~d~Vl~~~p~y~~~~~~~~~~g~~~~ 112 (350)
T TIGR03537 40 ALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-----DPE-E-DRRRVIFGTPGYPVYERGALFAGGEPT 112 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-----CCC-C-CCceEEEcCCCCcchHHHHHhcCCEEE
Confidence 344445555544333 45 89999999999999888773 333 0 116999999999887766655443322
Q ss_pred ccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 96 AIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. +...+ -.+ -|+++++++++ ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|..+
T Consensus 113 ~v----~~~~~---~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~ 181 (350)
T TIGR03537 113 AV----KLKKE---DGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEI 181 (350)
T ss_pred Ec----ccCcc---cCCccCHHHHHHhhh---hccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEecccccc
Confidence 11 11000 001 27899988886 4688898888889999777 8999999999999999999999999865
Q ss_pred cccccCcccccCCCC--CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hhcH
Q 017259 175 ARSGRMLASDWEEVR--PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKL 250 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~--~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~ 250 (374)
...+........+.. .-+.|+||.++ +|+ |+||+++++++.+.+.......+.+.+.+++.++.+++..-. ..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 260 (350)
T TIGR03537 182 YFGEPPHSALEVGIENVLAFHSLSKRSGMTGY-RSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLER 260 (350)
T ss_pred ccCCCCCchhhcCcCCEEEEeecccccCCccc-cceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHH
Confidence 332222111111111 11338899997 699 999999998888877754333444556667777766654100 0123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEe
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLT 324 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~ 324 (374)
+++++++.+.+.+.|+.. +.....+..+.++|+.+++.. +..++++.|.++||.+.++. .+++||+
T Consensus 261 r~~l~~~~~~~~~~l~~~-----g~~~~~~~g~~~~~~~~~~~~---~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~ 332 (350)
T TIGR03537 261 RKIFKRKRDLFIEFFNKV-----GLEYLYPDATFYLWVKVPSGI---DAKDYALRLLENGIVVAPGENFGSGEEGYVRVA 332 (350)
T ss_pred HHHHHHHHHHHHHHHHHC-----CCcccCCCeEEEEEEECCCCC---CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEE
Confidence 344444555554444433 221112234667788887543 57899999999999998752 5899999
Q ss_pred cCCCCCHHHHHHHHHHHHH
Q 017259 325 PPLSISSNELQEGSKALHD 343 (374)
Q Consensus 325 ~~~~~~~e~i~~~~~~l~~ 343 (374)
+ ..+++++++++++|++
T Consensus 333 ~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 333 L--VPTLEECEEALRLWER 349 (350)
T ss_pred e--cCCHHHHHHHHHHHhc
Confidence 4 4678899999988764
No 126
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=4.3e-27 Score=223.24 Aligned_cols=309 Identities=20% Similarity=0.261 Sum_probs=214.0
Q ss_pred hHHHHHHHhccccC--c--CC-CCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS--R--AF-YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~--~--~~-~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+.+++++..... + .+ ..+.+.+|+++|++++|.+..++++||++|+..++..+.. ..+| +.|++.
T Consensus 67 ~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~---~~~g-----~~vi~~ 138 (410)
T PRK13392 67 GAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGK---LLPG-----CVILSD 138 (410)
T ss_pred HHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhc---CCCC-----CEEEEe
Confidence 56667776643321 1 12 3446889999999999888888888999999999987632 2245 666654
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
. .+|+.........+ ..+..++++|.+++++.+++.. ++++++++++++|++|.+.+ +++|.
T Consensus 139 ~-~~h~s~~~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~ 201 (410)
T PRK13392 139 A-LNHASMIEGIRRSG------------AEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAIC 201 (410)
T ss_pred h-hhhHHHHHHHHHcC------------CeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHH
Confidence 4 45665443333222 1223344567888888887543 57899999999999999998 99999
Q ss_pred HHHHhcCCEEEEecccc-CC-cccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCC--CC
Q 017259 156 DLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--ST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~~-~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~~ 227 (374)
++|++||+++|+||+|+ |+ +..|..+ ....+. .+|++ |+||+++. ..||+++++++++.++..... .+
T Consensus 202 ~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~~~~~~~~s 277 (410)
T PRK13392 202 DLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRSFAPGFIFT 277 (410)
T ss_pred HHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHHhCcchhcc
Confidence 99999999999999998 43 4444332 222222 34555 99999972 236788888888866543322 24
Q ss_pred CCCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
.+.++++++++.++++.+... ...++++++.+++++.|++++.. . ..+.+.++.+.++... ...+++++|
T Consensus 278 ~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~---~~~~~~~~~i~~~~~~---~~~~~~~~L 348 (410)
T PRK13392 278 TALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANGIP---V---MPSPSHIVPVMVGDPT---LCKAISDRL 348 (410)
T ss_pred CcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---C---CCCCCCEEEEEeCCHH---HHHHHHHHH
Confidence 455778888899999876543 34456777788888877765311 1 1234555555454321 467899999
Q ss_pred H-HCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 307 K-ERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 307 ~-~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+ ++||++.+. +..++||+++..++++|+++++++|+++++ ++
T Consensus 349 ~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~-~~ 398 (410)
T PRK13392 349 MSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWD-RL 398 (410)
T ss_pred HHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 7 579999763 236899999999999999999999999988 54
No 127
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=8.5e-27 Score=221.14 Aligned_cols=290 Identities=14% Similarity=0.113 Sum_probs=190.9
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC
Q 017259 35 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 114 (374)
Q Consensus 35 ~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 114 (374)
..+++++|+|+++++..++.++ ..+| |+|++..|+|..+...+...+...... +...+... -.|
T Consensus 103 ~~~~i~it~G~~~al~~~~~~~-----~~~g-----d~vlv~~P~y~~~~~~~~~~g~~~~~i----~~~~~~~~--~~d 166 (412)
T PTZ00433 103 KKDNVVLCSGVSHAILMALTAL-----CDEG-----DNILVPAPGFPHYETVCKAYGIEMRFY----NCRPEKDW--EAD 166 (412)
T ss_pred ChhhEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEccCCcccHHHHHHHcCCEEEEE----ecCccccC--cCC
Confidence 3568999999999999999988 5667 999999999987655544443221111 11000000 016
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCc-ccccCC-CCCcE
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE-VRPDM 192 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~-~~~~~~-~~~d~ 192 (374)
++++++.++ ++++++++++++||+|.+. +++.+++|.++|++||++||+||+|.++.+.+..+ ....+. ..+.+
T Consensus 167 ~~~l~~~~~---~~~~~i~~~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i 242 (412)
T PTZ00433 167 LDEIRRLVD---DRTKALIMTNPSNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRV 242 (412)
T ss_pred HHHHHHHhc---cCceEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceE
Confidence 888888776 4688888888899999777 89999999999999999999999999875444321 111111 11122
Q ss_pred --EEeccccc-CCccchhhhee------CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q 017259 193 --VILGKALG-GGVIPVSAVLA------DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 263 (374)
Q Consensus 193 --~s~sK~~~-~G~~~~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~ 263 (374)
-||||.++ +|+ |+||+++ .+++.+.+.... ...++.+.+++.++.+++... .+.+.++.++..+..++
T Consensus 243 ~~~SfSK~~~~pGl-RlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~ 319 (412)
T PTZ00433 243 ILGGTAKNLVVPGW-RLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAM 319 (412)
T ss_pred EEccchhhcCCCCe-eEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHH
Confidence 28999996 799 9999886 245666655321 224567888888888777531 12334333333333333
Q ss_pred HHHHHHHhCCCceeeEEEEeeeEEEEeccCCC--chhHHHHHHHHHH-CCeEeccCC----CCEEEEecCCCCCHHHHHH
Q 017259 264 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKE-RGILAKPTH----DTIVRLTPPLSISSNELQE 336 (374)
Q Consensus 264 ~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~-~Gi~v~~~~----~~~lRi~~~~~~~~e~i~~ 336 (374)
.+.+....+.++....+..|.|+|+.++.... ..+..++++.|++ +||.+.++. .+++||+++ ..++++++
T Consensus 320 ~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~ 397 (412)
T PTZ00433 320 VLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLRE 397 (412)
T ss_pred HHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHH
Confidence 33333322212211223357788888764100 0135789999985 799999863 589999965 46889999
Q ss_pred HHHHHHHHHhccCC
Q 017259 337 GSKALHDVLELDLP 350 (374)
Q Consensus 337 ~~~~l~~~~~~~~~ 350 (374)
++++|.++++ ...
T Consensus 398 al~~l~~~~~-~~~ 410 (412)
T PTZ00433 398 AVERIKAFCE-RHK 410 (412)
T ss_pred HHHHHHHHHH-Hhc
Confidence 9999999987 543
No 128
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.96 E-value=5.3e-27 Score=219.31 Aligned_cols=314 Identities=14% Similarity=0.114 Sum_probs=220.3
Q ss_pred hHHHHHHHhcccc--Cc---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccc-c-ccCC-CCccEE
Q 017259 2 KALQEQAEKLTLS--SR---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYV-K-KKFS-IDEAII 73 (374)
Q Consensus 2 ~a~~~~~~~~~~~--~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~-~-~G~~-~~~~~v 73 (374)
+++.+++++.... .+ .+..+.+++||++|++++|.+.+++++||..|+..++..+..-... . .+.+ .+++.+
T Consensus 123 ~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~ 202 (476)
T PLN02955 123 NAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVA 202 (476)
T ss_pred HHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcE
Confidence 4566666664321 12 2556778999999999999999999999999999999887321000 0 0000 112445
Q ss_pred EEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 74 VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 74 i~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
++.+..-|........++... -...+..++++|+++|+++|++.+++.++|++++++++.|.+.| +++
T Consensus 203 i~~D~~~HaSI~dG~~ls~~~--------~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~e 270 (476)
T PLN02955 203 IFSDALNHASIIDGVRLAERQ--------GNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP----MEE 270 (476)
T ss_pred EEEeccchHHHHHHHHhcccc--------CCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC----HHH
Confidence 555655577655554433110 00235567889999999999877667789999999999999999 999
Q ss_pred HHHHHHhcCCEEEEeccccC--CcccccCcccccCCCCCcE----EEecccccCCccchhhheeCHHHHhhcCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPDM----VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 227 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~~--~~~~g~~~~~~~~~~~~d~----~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~ 227 (374)
|.++|++||.+||+||+|+. +|..|.. ....+++.+++ .||||++| . +.|++++++++++.++.......
T Consensus 271 L~~L~~~~ga~LiVDEAH~~Gv~G~~G~G-~~e~~g~~~di~ii~~TLsKA~G--~-~GGfi~gs~~~~~~l~~~~~~~i 346 (476)
T PLN02955 271 LSQLRKKYGFLLVIDDAHGTFVCGENGGG-VAEEFNCEADVDLCVGTLSKAAG--C-HGGFIACSKKWKQLIQSRGRSFI 346 (476)
T ss_pred HHHHHHHcCcEEEEcccccCceecCCCCc-HHHHhCCCCCCcEEEEeCccchh--c-cCceeecHHHHHHHHHHhCCCCe
Confidence 99999999999999999983 3444444 33455554443 59999987 1 34558888888888875444444
Q ss_pred C--CCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 228 F--GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 228 ~--~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
| +.++...++++++++.+..+ ..+++++++.+++++. + ++.. .+.++.+.+.+.. ...++++
T Consensus 347 fStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~---~-----G~~~----~sPI~pI~ig~~~---~a~~~~~ 411 (476)
T PLN02955 347 FSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL---S-----GVDI----SSPIISLVVGNQE---KALKASR 411 (476)
T ss_pred ecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh---c-----CCCC----CCCEEEEEeCCHH---HHHHHHH
Confidence 4 33556677788888887544 4456677777766652 1 1211 2455555565443 6778999
Q ss_pred HHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 305 KMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 305 ~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+|+++||++.+. +...+||+++..++++|+++++++|.++.+
T Consensus 412 ~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 412 YLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred HHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHh
Confidence 999999998642 345799999999999999999999999887
No 129
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=3.8e-27 Score=220.79 Aligned_cols=294 Identities=15% Similarity=0.157 Sum_probs=197.5
Q ss_pred CCCcHHHHHHHHhccc----------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccc
Q 017259 19 YNDKFPVFAERLTSMF----------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI 88 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~----------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~ 88 (374)
+.+...+|.+.+++++ ..+++++|+|+++++..++.++ ..+| .++|++..|+|.++...+.
T Consensus 64 ~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~-----~~~g----~~~Vlv~~P~y~~~~~~~~ 134 (374)
T PRK02610 64 PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIAT-----CLGG----EGSILVAEPTFSMYGILAQ 134 (374)
T ss_pred CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHH-----cCCC----CCeEEEcCCChHHHHHHHH
Confidence 3344455555555544 3357999999999998777765 3344 1489999999987766655
Q ss_pred cccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 89 SMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
..+...... +...+. . -.|++++++++++. .++++++++++++||||.+. +++.+++|.++| ++++||+
T Consensus 135 ~~g~~~~~~----~~~~~~--~-~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~ 204 (374)
T PRK02610 135 TLGIPVVRV----GRDPET--F-EIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVI 204 (374)
T ss_pred HcCCEEEEe----cCCccc--C-CCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEE
Confidence 444322111 110000 0 02789999888642 13788998888899999888 788899999887 4999999
Q ss_pred eccccCCcccccCcccccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Q 017259 168 DEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 168 Dea~~~~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~ 243 (374)
||+|.+|..... .......++ +-||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++..+++
T Consensus 205 De~Y~~~~~~~~---~~~~~~~~~~ivi~SfSK~~g~~Gl-RiG~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~ 278 (374)
T PRK02610 205 DEAYFEFSQTTL---VGELAQHPNWVILRTFSKAFRLAAH-RVGYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALE 278 (374)
T ss_pred eccccccCccch---HHHHhcCCCEEEEEecchhccCccc-ceeeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc
Confidence 999998742111 111111223 338999996 799 9999999999988886543 345668888888877775
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEE
Q 017259 244 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRL 323 (374)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi 323 (374)
.. +.+.+.++...+. ++.+.+....++++ ...+..+.|+|+.++... +..++++.|.++||.+++. .+++||
T Consensus 279 ~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~-~~~p~~g~f~~~~l~~~~---~~~~~~~~l~~~gi~v~~~-~~~lRl 350 (374)
T PRK02610 279 HR--QELLAAIPEILQE-RDRLYQALQELPQL-RVWPSAANFLYLRLSQDA---ALAALHQALKAQGTLVRHT-GGGLRI 350 (374)
T ss_pred CH--HHHHHHHHHHHHH-HHHHHHHHHhCCCc-EeCCCcceEEEEeCCCCC---CHHHHHHHHHHCCEEEEeC-CCeEEE
Confidence 32 2334444443333 23333333333332 223456888898887543 6788999999999999876 679999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 324 TPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++. +.+++++++++|+++++ .+
T Consensus 351 s~~---~~~~~~~~l~~l~~~l~-~~ 372 (374)
T PRK02610 351 TIG---TPEENQRTLERLQAALT-QL 372 (374)
T ss_pred eCC---CHHHHHHHHHHHHHHHh-hc
Confidence 943 46788999999999987 55
No 130
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=6.3e-27 Score=220.31 Aligned_cols=292 Identities=15% Similarity=0.180 Sum_probs=194.0
Q ss_pred CcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++.+.+.++ .+ ++++|+|+++++..+++.+ ..+| |.|++.+|+|..+...+...+....
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~-----~~~g-----d~vlv~~P~y~~~~~~~~~~G~~v~ 140 (383)
T TIGR03540 71 AYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAF-----VNPG-----DIVLVPDPGYPVYRIGTLFAGGEPY 140 (383)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHh-----CCCC-----CEEEEeCCCCcchHHHHHhcCCEEE
Confidence 344455555554333 34 5889999999999998887 5677 9999999999887665544443211
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+... ..|++++++.+. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.
T Consensus 141 ~v----~~~~~~g~--~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~l~ 210 (383)
T TIGR03540 141 EM----PLKEENGF--LPDFDAIPEDIA---KKAKLMFINYPNNPTGAVA-PLKFFKELVEFAKEYNIIVCHDNAYSEIT 210 (383)
T ss_pred EE----ecCcccCC--ccCHHHHHhhcc---ccceEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCEEEEEecchhhhc
Confidence 11 11100000 026888887775 4688899888888999777 89999999999999999999999999765
Q ss_pred ccccC-cccccC-CCC---CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 176 RSGRM-LASDWE-EVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 176 ~~g~~-~~~~~~-~~~---~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
+.+.. ...... +.. ..+.||||.++ +|+ |+||+++++++.+.+.........+.+.+.+.++.++++....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 289 (383)
T TIGR03540 211 FDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW-RIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVV 289 (383)
T ss_pred cCCCCCcCcccCCCcccCEEEEEecccccCCccc-eeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHH
Confidence 43321 111111 111 22449999997 799 9999999999888876543333445566777777777753211
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------CCE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTI 320 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~ 320 (374)
++..+.++++.+.+.+.|++. ++.......+.++|+.+++.. +..++++.|+ ++||.+.++. +++
T Consensus 290 ~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~ 361 (383)
T TIGR03540 290 KEIRKIYQRRRDLLLEALKKI-----GIDVEKPKATFYVWVPVPEGY---TSAEFAARLLEETGVVVTPGVGFGEYGEGY 361 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-----CCEecCCCcceEEEEECCCCC---CHHHHHHHHHHHCCEEEecchhhCccCCCe
Confidence 123344444455555555443 222112234667888887543 6788999986 6799999852 479
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+||+++ .+++++.+++++|++
T Consensus 362 ~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 362 IRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred EEEEec--CCHHHHHHHHHHHhh
Confidence 999964 567888888887754
No 131
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=8.5e-27 Score=219.75 Aligned_cols=292 Identities=13% Similarity=0.109 Sum_probs=190.9
Q ss_pred CcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++++.+.+| .+ ++++|+|+++++..++.++ ..+| |+|++.+|+|..+...+...+....
T Consensus 74 ~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~-----~~~g-----d~vlv~~P~y~~~~~~~~~~g~~~~ 143 (389)
T PRK08068 74 FLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCL-----MNPG-----DTILVPDPGYPDYLSGVALARAQFE 143 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHhcCCEEE
Confidence 334444444433223 35 6999999999999888877 5677 9999999999776655444332211
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+... ..|++++++.+. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.
T Consensus 144 ~i----~~~~~~~~--~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~-s~~~~~~l~~la~~~~~~ii~Deay~~~~ 213 (389)
T PRK08068 144 TM----PLIAENNF--LPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVA-TKAFFEETVAFAKKHNIGVVHDFAYGAIG 213 (389)
T ss_pred Ee----ecccccCC--CCCHHHHHHhcc---ccceEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCeEEEEehhhhhhc
Confidence 11 11110000 026788887775 3678888887789999877 89999999999999999999999998765
Q ss_pred cccc-Ccc-cccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 176 RSGR-MLA-SDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 176 ~~g~-~~~-~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
+.+. ... ....+.... +.||||.++ +|+ |+||+++++++++.+.........+.+++.+.++.+++.....
T Consensus 214 ~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 292 (389)
T PRK08068 214 FDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCV 292 (389)
T ss_pred cCCCCCcChhhCCCccCCEEEEecchhccCCccc-eeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHH
Confidence 5442 211 111222222 339999997 799 9999999999988886543333344455566666666542111
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHH-CCeEeccCC------CCE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTI 320 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~ 320 (374)
+..++.++++++.+.+.|+.. +........+.++|+.+++.. +..++++.|++ +||.+.++. .++
T Consensus 293 ~~~~~~~~~~r~~~~~~L~~~-----g~~~~~~~g~~~~~v~~~~~~---~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~ 364 (389)
T PRK08068 293 AELVARYESRRNAFISACREI-----GWEVDAPKGSFFAWMPVPKGY---TSEQFADLLLEKAHVAVAPGNGFGEHGEGY 364 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeeEEEEEECCCCC---CHHHHHHHHHHhCCEEEecchHhCccCCCe
Confidence 133455555555555555443 221112233566788886543 67899999986 599998852 579
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+||++. .+++.+..++++|++
T Consensus 365 iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 365 VRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred EEEEEc--CCHHHHHHHHHHHHH
Confidence 999964 466777777777765
No 132
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=9.6e-27 Score=220.25 Aligned_cols=301 Identities=13% Similarity=0.130 Sum_probs=195.6
Q ss_pred CCcHHHHHHHHhccc-------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 20 NDKFPVFAERLTSMF-------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~-------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
.....++.+.+++++ ..+++++|+|+++++..++.++ .++| |+|++.+|+|..+...+...+.
T Consensus 72 ~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~v~i~~P~y~~~~~~~~~~g~ 141 (401)
T TIGR01264 72 TVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAAL-----ANAG-----QNILVPRPGFPLYETLAESMGI 141 (401)
T ss_pred CCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHh-----CCCC-----CEEEEeCCCChhHHHHHHHcCC
Confidence 444455666666554 3468999999999999999888 4567 9999999999766544443332
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..... +...+... -.|++.+++.++ ++++++++++++||+|.+. +.+.+++|.++|+++|++||+||+|.
T Consensus 142 ~v~~~----~~~~~~~~--~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~ 211 (401)
T TIGR01264 142 EVKLY----NLLPDKSW--EIDLKQLESLID---EKTAALIVNNPSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYG 211 (401)
T ss_pred EEEEe----ecCCccCC--CCCHHHHHHHhc---cCceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhh
Confidence 11110 10000000 027888888776 3578888888899999877 89999999999999999999999999
Q ss_pred CCcccccCcccccCCCCC--cE---EEeccccc-CCccchhhheeCH------HHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 173 GLARSGRMLASDWEEVRP--DM---VILGKALG-GGVIPVSAVLADK------EVMLCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~--d~---~s~sK~~~-~G~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
+|.+.+..+. ......+ .+ -||||.++ +|+ |+||+++++ ++++.+.... ...++.+.+++.++.+
T Consensus 212 ~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~iv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~ 288 (401)
T TIGR01264 212 DMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPGW-RLGWIIIHDRRGILRDIRDGLVKLS-QRILGPCTIVQGALPS 288 (401)
T ss_pred hhccCCcccc-cHHHcCCCCcEEEEccCcccCCCccc-eEEEEEecCcchhHHHHHHHHHHHh-hccCCCCcHHHHHHHH
Confidence 8755443211 1111222 23 38999966 799 999998763 3444443221 1235567888888877
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC--CCchhHHHHHHHHH-HCCeEeccCC
Q 017259 241 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT--ALPVSAYDICLKMK-ERGILAKPTH 317 (374)
Q Consensus 241 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~l~-~~Gi~v~~~~ 317 (374)
+++.. .+++.++.++..+..++.+.+....+++.....+..|+|+|+.++.. ....+..++++.|+ ++||.+.|+.
T Consensus 289 ~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~ 367 (401)
T TIGR01264 289 ILLRT-PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGS 367 (401)
T ss_pred HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCch
Confidence 77531 12333333333333333343333333332222345688999887531 00014577888886 6899998853
Q ss_pred ----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 ----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 ----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||+++ .+++++++++++|.++++
T Consensus 368 ~f~~~~~iRis~~--~~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 368 CFEYPGFFRVVLT--VPVVMMEEACSRIQEFCE 398 (401)
T ss_pred hcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 689999954 568999999999999887
No 133
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=1e-26 Score=218.89 Aligned_cols=294 Identities=16% Similarity=0.181 Sum_probs=195.7
Q ss_pred CcHHHHHHHHhccc--------CCC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 21 DKFPVFAERLTSMF--------GYD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 21 ~~~~~l~~~l~~~~--------~~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
....++++.+++++ ..+ ++++|+|+++|+..++..+ .++| |+|++..|+|.++.......+
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-----~~~g-----d~Vl~~~p~y~~~~~~~~~~g 134 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTI-----LEPG-----TEVILPAPIYPGYEPIIRLCG 134 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-----CCCC-----CEEEEcCCCccchHHHHHHcC
Confidence 33444555555443 345 8999999999999998877 5567 999999999987655554433
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
...... +. +..... .|.+++++.++ ++++++++.+++|++|.+. +.+.+++|.++|+++|++||+||+|
T Consensus 135 ~~~~~~----~~--~~~~~~-~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y 203 (387)
T PRK07683 135 AKPVFI----DT--RSTGFR-LTAEALENAIT---EKTRCVVLPYPSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIY 203 (387)
T ss_pred CEEEEe----ec--CcccCC-CCHHHHHHhcC---cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccc
Confidence 221111 11 000011 15788888776 4678888888899999877 8999999999999999999999999
Q ss_pred cCCcccccCcccccC-CCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 172 SGLARSGRMLASDWE-EVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~-~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
.++.+.+.......+ +...+ +.||||.++ +|+ |+||+++++++++.+.........+.+.+++.++.+.++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl-RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 282 (387)
T PRK07683 204 SELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW-RIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGK 282 (387)
T ss_pred ccceeCCCcCChhhccCCcCCeEEEeeccccccCccc-eeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh
Confidence 977443332221111 22222 338999999 899 999999999988887643222234456778877777775321
Q ss_pred h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CCCchhHHHHHHHH-HHCCeEeccCC-----
Q 017259 247 D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKM-KERGILAKPTH----- 317 (374)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l-~~~Gi~v~~~~----- 317 (374)
. +..+++++++.+.+.+.|++. ++....+..+.++|..++. .. +..+++..+ .++||.+.|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~~ 354 (387)
T PRK07683 283 DDAKMMRHQYKKRRDYVYNRLISM-----GLDVEKPTGAFYLFPSIGHFTM---SSFDFALDLVEEAGLAVVPGSAFSEY 354 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCeeEEEEEecccCCC---CHHHHHHHHHHhCCEEEcCchhhCCC
Confidence 1 123444455555555555443 2221122345566655553 22 456777665 56799998852
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++. .+++++.+++++|.++++
T Consensus 355 ~~~~~Ri~~~--~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 355 GEGYVRLSYA--YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 589999955 478999999999999887
No 134
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=6.9e-27 Score=220.39 Aligned_cols=305 Identities=22% Similarity=0.242 Sum_probs=215.2
Q ss_pred hHHHHHHHhcccc-----CcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLS-----SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+.... ...+..+..++++++++++++.++.+++++|++++..+++.+ .++| |+|++.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~-----~~~g-----d~V~~~ 129 (385)
T PRK05958 60 AAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTAL-----AGKG-----DLIVSD 129 (385)
T ss_pred HHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHh-----CCCC-----CEEEEe
Confidence 4566666553211 112446678899999999998788888889999988877665 5677 999998
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 156 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~ 156 (374)
++.| +.......+.+ ..+..++..|++++++.++..++++++++++++++++|...+ +++|.+
T Consensus 130 ~~~~-~~~~~~~~~~g------------~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ 192 (385)
T PRK05958 130 KLNH-ASLIDGARLSR------------ARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVA 192 (385)
T ss_pred CccC-HHHHHHHHhcC------------CceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHH
Confidence 8875 43333222221 223345556899999998754345788888889888998877 999999
Q ss_pred HHHhcCCEEEEeccccC--CcccccCccc-ccCCCCCc---EEEecccccCCccchhhheeCHHHHhhcCCCC--CCCCC
Q 017259 157 LCSKYNILMIADEIQSG--LARSGRMLAS-DWEEVRPD---MVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTF 228 (374)
Q Consensus 157 l~~~~~i~li~Dea~~~--~~~~g~~~~~-~~~~~~~d---~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~--~~~~~ 228 (374)
+|++||++||+||+|+. ++..|..+.. ......++ +.|+||++++ ++||+++++++.+.+.... ...+.
T Consensus 193 ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~ 269 (385)
T PRK05958 193 LARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRARPFIFTT 269 (385)
T ss_pred HHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhCccceecC
Confidence 99999999999999973 3333332211 11222345 4589999963 3467888888877664321 22334
Q ss_pred CCCHHHHHHHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
+.+++.++++.++++.+... ++.++++++.+++.+.|+++. + .+ ..+.+.++++.+++.. +..++.+.|.
T Consensus 270 ~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~---~~~~~~~~~~~~~~~~---~~~~~~~~l~ 340 (385)
T PRK05958 270 ALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG--F-QL---MDSQSAIQPLIVGDNE---RALALAAALQ 340 (385)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--C-Cc---CCCCCCEEEEEeCCHH---HHHHHHHHHH
Confidence 56777878888888877553 577888888888888887652 1 11 2345677888776432 5678999999
Q ss_pred HCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 308 ERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 308 ~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
++||.+.+. +.+++||+++..++++++++++++|++++
T Consensus 341 ~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 341 EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 999999752 24689999998899999999999998753
No 135
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=9.2e-27 Score=220.46 Aligned_cols=308 Identities=19% Similarity=0.235 Sum_probs=212.5
Q ss_pred hHHHHHHHhccccC-c----CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS-R----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~-~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+..+.. + .+..+++++++++++++++.++.+++++|++++..+++++ .++| |.|++.
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l-----~~~g-----d~vi~~ 132 (397)
T PRK06939 63 AAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETL-----LGKE-----DAIISD 132 (397)
T ss_pred HHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHh-----CCCC-----CEEEEE
Confidence 45566665533221 1 2445678889999999987776666666789999888776 5677 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKA 153 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~~~~~~~~g~~~~~~~~l~~ 153 (374)
+|+|.+......... ..+..+++.|++++++.++++ ..++++++++++++++|...+ +++
T Consensus 133 ~~~~~~~~~~~~~~~-------------~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~ 195 (397)
T PRK06939 133 ALNHASIIDGVRLCK-------------AKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPE 195 (397)
T ss_pred hhhhHHHHHHHHhcC-------------CceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHH
Confidence 999876544333222 122333446899999888742 236888888888888898776 999
Q ss_pred HHHHHHhcCCEEEEecccc-CC-cccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCC
Q 017259 154 VRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 227 (374)
Q Consensus 154 l~~l~~~~~i~li~Dea~~-~~-~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~ 227 (374)
|.++|++||++||+||+|+ ++ +..+.. .....+. .+|++ |+||+++ |+ |+||+++++++++.+........
T Consensus 196 l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~-g~-r~G~v~~~~~~~~~l~~~~~~~~ 272 (397)
T PRK06939 196 ICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGVMDRVDIITGTLGKALG-GA-SGGYTAGRKEVIDWLRQRSRPYL 272 (397)
T ss_pred HHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCCCCCCcEEEEECHHHhC-cc-CceEEEeCHHHHHHHHHhCcccc
Confidence 9999999999999999996 33 222221 1122222 34555 8999995 56 88999999988888764322222
Q ss_pred C--CCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 228 F--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 228 ~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
+ +.++..++++.++++.+.. +++.++++++.+++.+.|+..... . ..+.+.++++.++... +..++++
T Consensus 273 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~---~~~~~~~~~~~~~~~~---~~~~~~~ 343 (397)
T PRK06939 273 FSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGFT---L---GPGEHPIIPVMLGDAK---LAQEFAD 343 (397)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---c---CCCCCCEEEEEECCHH---HHHHHHH
Confidence 2 3345556677777777643 356778888888888888765211 1 1123445544444322 5678999
Q ss_pred HHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 305 KMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 305 ~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.|.++||.+.+. +.+++|++++..++++++++++++|+++++ ++
T Consensus 344 ~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~-~~ 394 (397)
T PRK06939 344 RLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGK-EL 394 (397)
T ss_pred HHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 999999988642 236899998888999999999999999987 53
No 136
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=9.9e-27 Score=219.13 Aligned_cols=291 Identities=14% Similarity=0.174 Sum_probs=191.6
Q ss_pred cHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 22 KFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 22 ~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
+++.+++.+.+.+| .+ .+++|+|+++++..++.++ .++| |+|++.+|+|..+...+...+.....
T Consensus 74 lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~-----~~~g-----d~Vl~~~P~y~~~~~~~~~~g~~~~~ 143 (385)
T PRK09276 74 FRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAF-----VNPG-----DVVLVPDPGYPVYKIGTIFAGGEPYF 143 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcChHHHHHHcCCEEEE
Confidence 34445555543333 34 4888999999999998887 5677 99999999998766554443322111
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 176 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~ 176 (374)
. +...+... ..|++++++.+. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.+
T Consensus 144 v----~~~~~~g~--~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~ 213 (385)
T PRK09276 144 M----PLKEENGF--LPDLDAIPEDVA---KKAKLMFINYPNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAY 213 (385)
T ss_pred E----ecCCCCCC--cCCHHHHHHhcc---ccceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheec
Confidence 1 11110000 026788877765 4688899888889999877 899999999999999999999999997644
Q ss_pred cccCc-cc-ccCC---CCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--h
Q 017259 177 SGRML-AS-DWEE---VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--E 248 (374)
Q Consensus 177 ~g~~~-~~-~~~~---~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~ 248 (374)
.+... .. ...+ ....+.||||.++ +|+ |+||+++++++++.+.........+.+.+.+.++..+++.... +
T Consensus 214 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 292 (385)
T PRK09276 214 DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW-RIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVE 292 (385)
T ss_pred CCCCCCChhccCCCcCCEEEEecchhhcCCcch-hheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHH
Confidence 33211 11 1111 1123449999997 799 9999999999888876543333344566777777777653111 1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------CCEE
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIV 321 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~l 321 (374)
+..++++++++++.+.|++. ++.......+.++|+.++... +..+++++|+ ++||.+.++. .+++
T Consensus 293 ~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~v~~~~~~---~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~ 364 (385)
T PRK09276 293 ELRKIYQERRDILVEGLRKL-----GLEVEPPKATFYVWAPVPKGY---TSAEFATLLLDKAGVVVTPGNGFGEYGEGYF 364 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceEEEEECCCCC---CHHHHHHHHHHhCCEEECCchhhCCCCCCeE
Confidence 23344444455555555443 221112233566788776543 6788999987 4799999862 4799
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q 017259 322 RLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~ 343 (374)
||+++ .+++++.+++++|++
T Consensus 365 Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 365 RIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred EEEeC--CCHHHHHHHHHHHhh
Confidence 99954 577888888887753
No 137
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=219.32 Aligned_cols=300 Identities=14% Similarity=0.133 Sum_probs=192.0
Q ss_pred CcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 21 DKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 21 ~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
++++.+++.+...+ ..+++++|+|+++|+..++..+ ..+| |+|++.+|+|+.+...+...+.....
T Consensus 98 ~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l-----~~~G-----d~Vlv~~P~y~~y~~~~~~~g~~~~~ 167 (430)
T PLN00145 98 PARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVL-----AQPG-----ANILLPRPGYPLYEARAVFSGLEVRH 167 (430)
T ss_pred HHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCCCccHHHHHHHcCCEEEE
Confidence 34444555444322 3468999999999999999988 4667 99999999998765444333322111
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 176 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~ 176 (374)
.. ..+. .++. -|++++++.++ ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.+
T Consensus 168 ~~-~~~~-~~~~----~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~-~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~ 237 (430)
T PLN00145 168 FD-LLPE-RGWE----VDLEGVEALAD---ENTVAMVIINPNNPCGSVY-SYEHLAKIAETARKLGILVIADEVYDHLTF 237 (430)
T ss_pred ee-CCcc-cCCc----CCHHHHHHHhC---cCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccchhhcc
Confidence 10 0000 0111 17889988776 4678888888889999877 899999999999999999999999998754
Q ss_pred cccCc-ccccCCCCCcE---EEeccccc-CCccchhhhee--CHHHHh------hcCCCCCCCCCCCCHHHHHHHHHHHH
Q 017259 177 SGRML-ASDWEEVRPDM---VILGKALG-GGVIPVSAVLA--DKEVML------CIQPGEHGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 177 ~g~~~-~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~aa~~al~ 243 (374)
.+..+ .....+....+ -||||.++ +|+ |+||+++ ++.+++ .+... .....+.+.+.|.++..+++
T Consensus 238 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~-RlG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Q~a~~~~l~ 315 (430)
T PLN00145 238 GSKPFVPMGVFGEVAPVLTLGSISKRWVVPGW-RLGWIATCDPNGILKETKVVDSIRNY-LNISTDPATFVQGAIPQIIA 315 (430)
T ss_pred CCCCccchhhhcccCcEEEEeccccccCCCCe-eEEEEEEecchhhhhhhHHHHHHHHH-hcccCCCCHHHHHHHHHHHh
Confidence 44221 21111112223 38999966 799 9999886 333322 22221 22233557888888887776
Q ss_pred HHhhhcH----HHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCC-c-hhHHHHHHHHH-HCCeEecc
Q 017259 244 VIRDEKL----AERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTAL-P-VSAYDICLKMK-ERGILAKP 315 (374)
Q Consensus 244 ~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~-~~~~~~~~~l~-~~Gi~v~~ 315 (374)
.. .+++ .+.++++++.+.+.|+. ++++... .+..+.|+|+.++.... + .+..+++..|+ ++||.+.|
T Consensus 316 ~~-~~~~~~~~~~~~~~~~~~~~~~L~~----~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~p 390 (430)
T PLN00145 316 NT-KEEFFTKTLGLLKETADICYEKIKE----IKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLP 390 (430)
T ss_pred cC-HHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeC
Confidence 31 1233 33444444444444433 3322212 24456777777653100 0 13566777665 56999988
Q ss_pred C----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 316 T----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 316 ~----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
+ ..+++||++. .+.+++++++++|++++. ...
T Consensus 391 G~~fg~~~~lRis~~--~~~~~l~~al~rl~~~~~-~~~ 426 (430)
T PLN00145 391 GSALGMKNWLRITFA--IDPPSLEDGLERLKSFCL-RHA 426 (430)
T ss_pred ccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-Hhc
Confidence 6 3689999955 578999999999999998 554
No 138
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.9e-27 Score=218.64 Aligned_cols=287 Identities=15% Similarity=0.139 Sum_probs=195.5
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++.....++++.++++++ .+++++|+|+++++..++..+ .++| |+|++.+|+|+++...+...+....
T Consensus 61 ~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~-----~~~g-----d~v~~~~p~y~~~~~~~~~~g~~~~ 130 (359)
T PRK03158 61 YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL-----LNPG-----TNTVMAEPTFSQYRHNAIIEGAEVR 130 (359)
T ss_pred CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH-----hCCC-----CEEEEcCCCHHHHHHHHHHcCCeEE
Confidence 445567788888888875 458999999999999888877 4566 9999999999876554443322111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
. .+.. +. ..|++++++.++ ++++++++++++|++|.+. +.+.+.++++.|+ +|++||+||+|.++.
T Consensus 131 ~----~~~~-~~----~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~ 196 (359)
T PRK03158 131 E----VPLK-DG----GHDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYV 196 (359)
T ss_pred E----EecC-CC----CcCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhc
Confidence 1 0110 00 126888887775 4678888888899999888 5555555555553 699999999998764
Q ss_pred cccc-CcccccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcH
Q 017259 176 RSGR-MLASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 250 (374)
Q Consensus 176 ~~g~-~~~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~ 250 (374)
..+. .......+..+. +.||||.++ +|+ |+||+++++++++.+.... .+++.+.+++.++.++++. .++
T Consensus 197 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~---~~~ 270 (359)
T PRK03158 197 TAEDYPDTLPLLEKYENLIVLRTFSKAYGLAAL-RVGYGIASEELIEKLNIAR--PPFNTTRIAQYAAIAALED---QAF 270 (359)
T ss_pred CCcccccHHHHHHhcCCEEEEEechHhhcCcch-hhehhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC---HHH
Confidence 3322 111111111122 239999999 799 9999999999888886532 3477899999999888852 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC----CCCEEEEecC
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPP 326 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~----~~~~lRi~~~ 326 (374)
.+++++..++.++.+.+....+ ++ ...++.|.++|+.++. +..++++.|.++||.+.++ .++++||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~g~~i~~~~~~-----~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~-- 341 (359)
T PRK03158 271 LKECVEKNAEGLEQYYAFCKEY-GL-FYYPSQTNFIFVDTGR-----DANELFEALLKKGYIVRSGAALGFPTGVRIT-- 341 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CC-eeCCCcCcEEEEECCC-----CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe--
Confidence 4444333333333333333332 22 1234457788877642 4678999999999999985 36899999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALHDV 344 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~ 344 (374)
..+++++++++++|+++
T Consensus 342 -~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 342 -IGLKEQNDKIIELLKEL 358 (359)
T ss_pred -cCCHHHHHHHHHHHHHh
Confidence 44889999999999875
No 139
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=3.2e-26 Score=201.84 Aligned_cols=321 Identities=16% Similarity=0.189 Sum_probs=227.3
Q ss_pred ChHHHHHHHhccccCcCCCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 1 MKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
++|++++++.+.+.++....+....+..+.++.+ ..+++.++++.--++..+++.+ .++| |.|++.
T Consensus 44 ~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~-----T~~g-----d~Vvi~ 113 (388)
T COG1168 44 IEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL-----TKPG-----DGVVIQ 113 (388)
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh-----CcCC-----CeeEec
Confidence 3677788877777666454557777888888866 4468999999999999999999 6778 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRD 156 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~ 156 (374)
.|.|+........- +......|+..+...... |.++||+++.+ ++++++++++++||+|.+- ++++|.+|.+
T Consensus 114 tPvY~PF~~~i~~n----~R~~i~~pL~~~~~~y~i-D~~~LE~~~~~--~~vkl~iLCnPHNP~Grvw-t~eeL~~i~e 185 (388)
T COG1168 114 TPVYPPFYNAIKLN----GRKVIENPLVEDDGRYEI-DFDALEKAFVD--ERVKLFILCNPHNPTGRVW-TKEELRKIAE 185 (388)
T ss_pred CCCchHHHHHHhhc----CcEEEeccccccCCcEEe-cHHHHHHHHhc--CCccEEEEeCCCCCCCccc-cHHHHHHHHH
Confidence 99997654332221 222222222211111111 89999999985 4678999999999998655 9999999999
Q ss_pred HHHhcCCEEEEeccccCCcccc-cCcccccC--CCCCcE---EEeccccc-CCccchhhhe-eCHHHHhhcCC-CCCCCC
Q 017259 157 LCSKYNILMIADEIQSGLARSG-RMLASDWE--EVRPDM---VILGKALG-GGVIPVSAVL-ADKEVMLCIQP-GEHGST 227 (374)
Q Consensus 157 l~~~~~i~li~Dea~~~~~~~g-~~~~~~~~--~~~~d~---~s~sK~~~-~G~~~~G~~~-~~~~~~~~~~~-~~~~~~ 227 (374)
+|.+||+.||+||+|+++...| +.+.+... ...... .+-||++. +|+ .+++++ .++++..++.. ......
T Consensus 186 lc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL-~~a~~Ii~n~~lr~~~~~~l~~~~~ 264 (388)
T COG1168 186 LCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGL-KCAYIIISNRELRAKFLKRLKRNGL 264 (388)
T ss_pred HHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhh-hheeEEecCHHHHHHHHHHHHHhcC
Confidence 9999999999999999987667 33332211 111122 24479998 788 888855 56665444432 223445
Q ss_pred CCCCHHHHHHHHHHHHHHhhh--cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeE-EEEeccCCCchhHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRDE--KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTALPVSAYDICL 304 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~ 304 (374)
..+|.+++.|..++.+..+.. ++.+.++++.+++.+.+.+. +| .+..+.++|.|. |+++... +.+..++.+
T Consensus 265 ~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~---~P-~v~v~~p~gTYL~WLD~r~l--~l~d~~l~~ 338 (388)
T COG1168 265 HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH---LP-GVKVTEPQGTYLAWLDCREL--GLDDSELAE 338 (388)
T ss_pred CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh---CC-CcEEecCCCceeeeeecccc--CCChHHHHH
Confidence 577999999999999875442 56667777777777766655 34 455555665554 5566443 235578888
Q ss_pred HHHHC-CeEeccC------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 305 KMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 305 ~l~~~-Gi~v~~~------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.|+++ +|.+.++ +.+++|++ +.++.+.+++++++|+++++ .+
T Consensus 339 ~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~~al~-~~ 387 (388)
T COG1168 339 FLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLKRALK-KR 387 (388)
T ss_pred HHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHHHHHHh-cc
Confidence 88865 7777665 46999999 78999999999999999987 53
No 140
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.8e-26 Score=220.41 Aligned_cols=327 Identities=16% Similarity=0.154 Sum_probs=223.5
Q ss_pred hHHHHHHHhcccc--CcC---CCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLS--SRA---FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+.... ++. +..+.++++++.+++++|.+..++.++|+.++..++.++ .++| |.|++.
T Consensus 122 ~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al-----~~~G-----d~Vi~d 191 (489)
T PLN02483 122 PRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPAL-----IGKG-----GLIISD 191 (489)
T ss_pred HHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh-----CCCC-----CEEEEc
Confidence 4566666663321 222 457889999999999999888888888888888777776 6677 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc----CC------cEEEEEEccccCCCCcccC
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES----GD------QIAGFLFEPIQGEAGVIIP 146 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----~~------~~~~vi~~~~~~~~g~~~~ 146 (374)
+++|++....+...+ ..+..++++|++++++.+++. .+ +..+++++++.++.|.+.+
T Consensus 192 ~~~h~s~~~~~~~~G-------------a~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~ 258 (489)
T PLN02483 192 SLNHNSIVNGARGSG-------------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK 258 (489)
T ss_pred chhhHHHHHHHHHcC-------------CeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC
Confidence 999876544432221 345566677888888877631 01 1347778888899999988
Q ss_pred ChhHHHHHHHHHHhcCCEEEEecccc-C-CcccccCcccccCCCC---CcEE--EecccccCCccchhhheeCHHHHhhc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVR---PDMV--ILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~~---~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
+++|.++|++||++||+||+|+ + ++..|.. .....+.. .|++ ||||++++ .+||+++++++++.+
T Consensus 259 ----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l 330 (489)
T PLN02483 259 ----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYL 330 (489)
T ss_pred ----HHHHHHHHHHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHH
Confidence 9999999999999999999998 2 3444433 22333332 3454 99999973 347788999999988
Q ss_pred CCCCCCCCC--CCCHHHHHHHHHHHHHHhhh-------cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe
Q 017259 220 QPGEHGSTF--GGNPLASAVAIASLDVIRDE-------KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 290 (374)
Q Consensus 220 ~~~~~~~~~--~~~~~~~~aa~~al~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 290 (374)
+.......+ +.++..++++.++++.+..+ +..++++++.+++++.|++++.. +.. ...+.++++.+
T Consensus 331 ~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~---v~~--~~~sp~~~l~l 405 (489)
T PLN02483 331 KRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFE---VLG--DNDSPVMPIML 405 (489)
T ss_pred HHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCc---ccC--CCCCCEEEEEE
Confidence 765443333 34666666777888765421 34567777888888888775211 111 11234555544
Q ss_pred ccCCCchhHHHHHHHHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCCCCCCCCCCC
Q 017259 291 DKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPAT 363 (374)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
.... ...++++.|+++||.+.+. ..+.+||+++..++++++++++++|+++++ .+ ... +.+...++.
T Consensus 406 ~~~~---~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~-~~-~~~-~~~~~~~~~ 479 (489)
T PLN02483 406 YNPA---KIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGD-LV-GIK-YFPAEPKKQ 479 (489)
T ss_pred CCHH---HHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hh-Cce-eccCCCCcc
Confidence 3322 5668999999999999742 236899999999999999999999999988 54 222 333444444
Q ss_pred CCccccc
Q 017259 364 PCHRCGR 370 (374)
Q Consensus 364 ~~~~~~~ 370 (374)
.-+.|.+
T Consensus 480 ~~~~~~~ 486 (489)
T PLN02483 480 EQVKKFI 486 (489)
T ss_pred hhhhhcc
Confidence 3334433
No 141
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-26 Score=218.95 Aligned_cols=292 Identities=15% Similarity=0.189 Sum_probs=192.7
Q ss_pred CcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++++.+++++.+.++ .+ .+++|+|+++++..++.++ ..+| |+|++.+|+|.++...+...+....
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~~~ 146 (394)
T PRK05942 77 SFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAY-----VNPG-----DVVLVPSPAYPAHFRGPLIAGAQIY 146 (394)
T ss_pred HHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHHcCCEEE
Confidence 344445555544323 44 4889999999999998877 5677 9999999999876554433322111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
. .++..+.. . ..|++++++.+. ++++++++++++||+|.+. +++.+++|.++|++||++||+||+|.++.
T Consensus 147 ~----v~~~~~~~-~-~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~ 216 (394)
T PRK05942 147 P----IILKPEND-W-LIDLSSIPEEVA---QQAKILYFNYPSNPTTATA-PREFFEEIVAFARKYEIMLVHDLCYAELA 216 (394)
T ss_pred E----eecCCccC-C-ccCHHHHHHhcc---ccceEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHcCeEEEEeccchhhc
Confidence 1 01110000 0 026888888776 4789999988899999877 89999999999999999999999999775
Q ss_pred ccccC-cccc-cC---CCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 176 RSGRM-LASD-WE---EVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 176 ~~g~~-~~~~-~~---~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
+.+.. .... .. +....+.||||.++ +|+ |+||+++++++++.++.......++.+.+++.++.++++...+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl-RiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 295 (394)
T PRK05942 217 FDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW-RVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYL 295 (394)
T ss_pred cCCCCCCChhhCCCccccEEEEecchhccCChhh-heeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHH
Confidence 44421 1111 11 11223458999997 799 9999999999998887654445667778888888888763221
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------CCE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTI 320 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~ 320 (374)
++..++++++.+.+.+.|+.. ++.......+.++|+.++... +..++..+++ ++||.+.++. .++
T Consensus 296 ~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~f~~~~~~~~~---~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~ 367 (394)
T PRK05942 296 QQVQERYRTRRDFLIQGLGEL-----GWNIPPTKATMYLWVPCPVGM---GSTDFALNVLQKTGVVVTPGNAFGEGGEGY 367 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----CCeecCCCeeeEEEEECCCCC---CHHHHHHHHHHHCCEEEeCChhhCcCCCCe
Confidence 133444555555555555432 222112234568888886543 4667777655 6899998752 579
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+|++++ .+.+.+.+++++|.+
T Consensus 368 iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 368 VRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred EEEEec--CCHHHHHHHHHHHHH
Confidence 999964 445556666665543
No 142
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=2.3e-26 Score=216.71 Aligned_cols=297 Identities=19% Similarity=0.201 Sum_probs=197.7
Q ss_pred CCcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 20 NDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.++++.+++++.+.+| .+ ++++|+|+++++..++..+ .++| |+|++..|+|..+...+...+...
T Consensus 66 ~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~ 135 (387)
T PRK08912 66 PELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLAL-----VEPG-----DEVVLFQPLYDAYLPLIRRAGGVP 135 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHh-----cCCC-----CEEEEeCCCchhhHHHHHHcCCEE
Confidence 3444555555554333 45 8999999999999888877 5567 999999999977665544333221
Q ss_pred cccccCCCCCC-CceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 95 EAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
... +... +.. .|++++++.+. ++++++++++++|++|.+. +.+.+++|.++|++||++||+||+|.+
T Consensus 136 ~~~----~~~~~~~~----~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~ 203 (387)
T PRK08912 136 RLV----RLEPPHWR----LPRAALAAAFS---PRTKAVLLNNPLNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEH 203 (387)
T ss_pred EEE----ecCcccCc----CCHHHHHHHhC---ccceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhh
Confidence 111 1100 000 16888888876 4678888888899999877 799999999999999999999999987
Q ss_pred CcccccCc-c-cccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 174 LARSGRML-A-SDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 174 ~~~~g~~~-~-~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
+.+.+..+ . ....+.... +.||||.++ +|+ |+||+++++++++.+........++.++..+.++.+++....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 282 (387)
T PRK08912 204 VVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDD 282 (387)
T ss_pred cccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHH
Confidence 64433211 1 111122122 338999999 899 9999999999888876543444566666677777666642111
Q ss_pred --hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC-------
Q 017259 248 --EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------- 317 (374)
Q Consensus 248 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------- 317 (374)
++..++++++.+.+.+.|+.. ++.......+.++|+.++......+..++++.|+ ++||.+.|+.
T Consensus 283 ~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~ 357 (387)
T PRK08912 283 YFEGMRADLARSRDRLAAGLRRI-----GFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDP 357 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCC
Confidence 133445555555555555443 2211112235667777764110115678999986 5799998842
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++|++++ ..++++++++++|+++++
T Consensus 358 ~~~~iRl~~~--~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 358 VTSVVRFCFA--KRDATLDEAVERLAAARR 385 (387)
T ss_pred CCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 479999955 468999999999998876
No 143
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=1.8e-26 Score=212.48 Aligned_cols=270 Identities=15% Similarity=0.159 Sum_probs=192.6
Q ss_pred HHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCC
Q 017259 24 PVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPL 103 (374)
Q Consensus 24 ~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 103 (374)
.+|.+.++++++.+++++|+|+++++..++. ..+| |+|++.+|+|.++...+...+.
T Consensus 52 ~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~-------~~~g-----d~v~v~~P~y~~~~~~~~~~g~----------- 108 (330)
T PRK05664 52 DGLEAAARAYYGAPQLLPVAGSQAAIQALPR-------LRAP-----GRVGVLSPCYAEHAHAWRRAGH----------- 108 (330)
T ss_pred HHHHHHHHHHhCCCCEEECcCHHHHHHHHHH-------ccCC-----CEEEEcCCChHHHHHHHHHcCC-----------
Confidence 7899999999999999999999999987642 3567 9999999999877665554432
Q ss_pred CCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCccc
Q 017259 104 LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 183 (374)
Q Consensus 104 ~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~ 183 (374)
++..++ ++++++.++ +++++++++++||||.+. +.+.+++|.++|+++|++||+||+|.++...... .
T Consensus 109 --~~~~v~---~~~~~~~~~----~~~~v~l~nP~NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~--~ 176 (330)
T PRK05664 109 --QVRELD---EAEVEAALD----SLDVLVVVNPNNPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQHSL--A 176 (330)
T ss_pred --eEEEec---hhhHhhhhc----CCCEEEEeCCcCCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCcccc--c
Confidence 222333 345666654 455666666678999887 8999999999999999999999999876321111 1
Q ss_pred ccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHH
Q 017259 184 DWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLG 258 (374)
Q Consensus 184 ~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~ 258 (374)
.. .-.++ +-||||.++ +|+ |+||+++++++.+.+... ..++..+.+++.++.++++.... +..++.+++++
T Consensus 177 ~~-~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r 252 (330)
T PRK05664 177 AC-AHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLRALAEL--LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAAS 252 (330)
T ss_pred cc-ccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHHHHHHh--cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 11 11233 339999999 899 999999999998888753 23456678888888888763211 23445555555
Q ss_pred HHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC-CCCEEEEecCCCCCHHHHHHH
Q 017259 259 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEG 337 (374)
Q Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-~~~~lRi~~~~~~~~e~i~~~ 337 (374)
+++.+.|++. ++. ...+.+.++|+.++ +..++.+.|.++||.++.. ..+++||+++ .+.++++++
T Consensus 253 ~~l~~~L~~~-----~~~-~~~~~~~f~~~~~~------~~~~~~~~l~~~gi~v~~f~~~~~iRis~~--~~~~~~~~l 318 (330)
T PRK05664 253 QRLAALLRRH-----GLT-PAGGCALFQWVRTE------DAAALHEFLARRGILTRLFEQPASLRFGLP--ADEADWARL 318 (330)
T ss_pred HHHHHHHHHC-----CCc-ccCCcceEEEEecC------CHHHHHHHHHHCCeEEEECCCCCeEEEECC--CCHHHHHHH
Confidence 6666655543 221 12233466676543 4688999999999999875 3689999944 367889999
Q ss_pred HHHHHHHHh
Q 017259 338 SKALHDVLE 346 (374)
Q Consensus 338 ~~~l~~~~~ 346 (374)
.++|+++.+
T Consensus 319 ~~al~~~~~ 327 (330)
T PRK05664 319 DQALLAYRK 327 (330)
T ss_pred HHHHHHHHh
Confidence 999988776
No 144
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=3.1e-26 Score=216.90 Aligned_cols=304 Identities=16% Similarity=0.148 Sum_probs=192.9
Q ss_pred CCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..++++.+++++.+.+ ..+++++|+|+++++..+++++ ..+| |.|++..|+|+++...+...+..
T Consensus 75 G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l-----~~~g-----d~v~v~~P~y~~~~~~~~~~g~~ 144 (409)
T PLN00143 75 GILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVL-----ARPE-----ANILLPRPGFPDVETYAIFHHLE 144 (409)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHH-----cCCC-----CEEEEcCCCCcCHHHHHHHcCCE
Confidence 44445555666665533 4468999999999999999988 5667 99999999998775544433321
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.... +....- ... .|+++++++++ ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.+
T Consensus 145 ~~~~----~~~~~~-~~~-~d~~~l~~~~~---~~~~~~~~~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~ 214 (409)
T PLN00143 145 IRHF----DLLPEK-GWE-VDLDAVEAIAD---ENTIAMVIINPGNPCGSVY-SYEHLNKIAETARKLGILVIADEVYGH 214 (409)
T ss_pred EEEE----eccCCC-CCc-CCHHHHHHhcc---cCCEEEEEECCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccc
Confidence 1111 110000 000 27899988775 3567777777789999887 899999999999999999999999998
Q ss_pred CcccccCc-ccccCCCCCcE---EEeccccc-CCccchhhheeC--HHHH------hhcCCCCCCCCCCCCHHHHHHHHH
Q 017259 174 LARSGRML-ASDWEEVRPDM---VILGKALG-GGVIPVSAVLAD--KEVM------LCIQPGEHGSTFGGNPLASAVAIA 240 (374)
Q Consensus 174 ~~~~g~~~-~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~aa~~ 240 (374)
+.+.+..+ ......-...+ .||||.++ +|+ |+||++++ +.+. +.+........+ .+.+++.++.+
T Consensus 215 l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~ 292 (409)
T PLN00143 215 IVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW-GLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPE 292 (409)
T ss_pred cccCCCCCcchhhhcccCcEEEEccchhhcCCCcc-ceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHH
Confidence 75544321 11112112222 38999966 799 99999873 3332 222221111222 46778888877
Q ss_pred HHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCC-c-hhHHHHHHHH-HHCCeEe
Q 017259 241 SLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTAL-P-VSAYDICLKM-KERGILA 313 (374)
Q Consensus 241 al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~-~~~~~~~~~l-~~~Gi~v 313 (374)
+++.... ++..+++++..+++.+.|++ ++..... .+..|.|+|+.++.... + .+..+++..+ .++||.+
T Consensus 293 ~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v 368 (409)
T PLN00143 293 ILEKTTEDFFSKTINILRAALAFCYDKLKE----IPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLII 368 (409)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEE
Confidence 7753111 12334444444444444433 2212211 23357888888863100 0 0345666554 6789999
Q ss_pred ccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 314 KPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 314 ~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.|+. .+++||+++ .+++++++++++|+++++ ...
T Consensus 369 ~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l~-~~~ 406 (409)
T PLN00143 369 LPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFCG-RHA 406 (409)
T ss_pred eCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHHH-Hhc
Confidence 9863 689999955 578999999999999987 543
No 145
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=3.8e-26 Score=216.36 Aligned_cols=300 Identities=15% Similarity=0.120 Sum_probs=192.2
Q ss_pred CcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 21 DKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 21 ~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
....++++.+++++ ..+++++|+|+++|+..++.++ ..+| |+|++.+|+|..+.......+.
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~ 142 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSML-----ARPG-----ANILLPRPGFPIYELCAAFRHL 142 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHH-----hCCC-----CeEEEeCCCCCcHHHHHHHcCC
Confidence 33444555555543 3468999999999999999887 4567 9999999999665433332222
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..... +...+- .. ..|+++++++++ ++++++++++++|++|.+. +++.+++|+++|++||++||+||+|.
T Consensus 143 ~~~~i----~~~~~~-~~-~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~ 212 (409)
T PLN02656 143 EVRYV----DLLPEK-GW-EVDLDAVEALAD---QNTVALVIINPGNPCGNVY-SYQHLKKIAETAEKLKILVIADEVYG 212 (409)
T ss_pred EEEEE----eCCCcC-CC-CCCHHHHHHHhc---cCceEEEEECCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhh
Confidence 11111 110000 00 027888888776 4577777777888999887 89999999999999999999999999
Q ss_pred CCcccccCc-ccccCCCCCc---EEEeccccc-CCccchhhheeC--------HHHHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 173 GLARSGRML-ASDWEEVRPD---MVILGKALG-GGVIPVSAVLAD--------KEVMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 173 ~~~~~g~~~-~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
++.+.+..+ .....+.... +-||||.++ +|+ |+||++++ +++++.+..... ...+.+.+++.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RiG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~ 290 (409)
T PLN02656 213 HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW-RLGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVP 290 (409)
T ss_pred hcccCCCCcccHHHhcccCcEEEEcccchhccCcce-eEEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHH
Confidence 875544321 1111111112 338999966 799 99999873 467666653212 12356788888888
Q ss_pred HHHHHHhhhcHH----HHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCC-c-hhHHHH-HHHHHHCCe
Q 017259 240 ASLDVIRDEKLA----ERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTAL-P-VSAYDI-CLKMKERGI 311 (374)
Q Consensus 240 ~al~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~-~~~~~~-~~~l~~~Gi 311 (374)
++++... +++. ++++++++.+.+.|+. ++..... .+..|.++|+.++.... . .+..++ .+.|.++||
T Consensus 291 ~~l~~~~-~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV 365 (409)
T PLN02656 291 TILEQTD-ESFFKKTINILKQSSDICCDRIKE----IPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESV 365 (409)
T ss_pred HHHhcCc-HHHHHHHHHHHHHHHHHHHHHHhh----CCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCE
Confidence 8886321 2233 3344444444444433 3222111 23346778887752100 0 023344 466678899
Q ss_pred EeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 312 LAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 312 ~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+.|+. .+++||++. .+++++++++++|++++. ...
T Consensus 366 ~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~-~~~ 405 (409)
T PLN02656 366 IILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYL-RHS 405 (409)
T ss_pred EEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-Hhc
Confidence 999863 589999965 478999999999999887 544
No 146
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=3.8e-26 Score=215.68 Aligned_cols=295 Identities=12% Similarity=0.175 Sum_probs=201.1
Q ss_pred CCcHHHHHHHHhcccC----CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 20 NDKFPVFAERLTSMFG----YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~----~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.++++.+++.+.+.+| .+ ++++|+|+++++..++..+ .++| |+|++.+|+|..+...+...+..
T Consensus 70 ~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~- 138 (395)
T PRK08175 70 PRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLAT-----LDHG-----DTVLVPNPSYPIHIYGAVIAGAQ- 138 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHHcCCe-
Confidence 3344455555554332 34 6999999999999888777 5677 99999999997765544433221
Q ss_pred cccccCCCCCCCceeccC----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 95 EAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
+..++. .+.+++++++++..++++++++++++|++|.+. +.+.+++|.++|++||++||+||+
T Consensus 139 ------------~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~ 205 (395)
T PRK08175 139 ------------VRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLA 205 (395)
T ss_pred ------------EEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecc
Confidence 112221 147888888876555788999888888999777 899999999999999999999999
Q ss_pred ccCCcccccCc-cc-ccCCCC---CcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017259 171 QSGLARSGRML-AS-DWEEVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 244 (374)
Q Consensus 171 ~~~~~~~g~~~-~~-~~~~~~---~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~ 244 (374)
|.++.+.+... .. ...+.. ..+.||||.++ +|+ |+||+++++++++.+........++.+.+.+.++..+++.
T Consensus 206 y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (395)
T PRK08175 206 YADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW-RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG 284 (395)
T ss_pred hHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch-hheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC
Confidence 99765443221 11 111111 12348999997 799 9999999999988887544444566677777777777753
Q ss_pred Hhh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC----
Q 017259 245 IRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH---- 317 (374)
Q Consensus 245 ~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~---- 317 (374)
... +.+.+.++++.+++.+.|+.. +.....+..|.++|+.+++.....+..+++..|+ ++||.+.++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~ 359 (395)
T PRK08175 285 DQQCVRDIAEQYKRRRDVLVKGLHEA-----GWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD 359 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc
Confidence 111 123344444455555555443 2222223468899998875421113678888776 6799998862
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++. .+++.+.+++++|.++++
T Consensus 360 ~~~~~lRis~~--~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 360 YGDTHVRFALI--ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred CCCCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 468999954 578999999999999887
No 147
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=3.6e-26 Score=213.54 Aligned_cols=301 Identities=19% Similarity=0.217 Sum_probs=207.5
Q ss_pred hHHHHHHHhccccC-----cCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS-----RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+..... ..+..+...++++.++++++.+..+++++|++++..+++.+ .++| |+|++.
T Consensus 37 ~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~-----~~~g-----d~v~~~ 106 (360)
T TIGR00858 37 QAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGVISAL-----VGKG-----DLILSD 106 (360)
T ss_pred HHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHh-----CCCC-----CEEEEE
Confidence 45666665522211 12335678889999999887777777777788888777665 4567 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+++|........ ..+ ..+..++..|++++++.++.+. ++++++++.++++++|...+ +++|.
T Consensus 107 ~~~~~~~~~~~~-~~g------------~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~ 169 (360)
T TIGR00858 107 ALNHASLIDGCR-LSG------------ARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLV 169 (360)
T ss_pred ccccHHHHHHHH-hcC------------CceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHH
Confidence 888754433322 211 2233344568999999987643 35788888888888998887 99999
Q ss_pred HHHHhcCCEEEEeccccCC--cccccCcccccCCCCCc-----EEEecccccCCccchhhheeCHHHHhhcCCCCCC--C
Q 017259 156 DLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPD-----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--S 226 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~--~~~g~~~~~~~~~~~~d-----~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~ 226 (374)
++|+++|++||+||+|+.+ +..+.. .....++.++ +.|+||++++ ++||+++++++.+.+...... .
T Consensus 170 ~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~ 245 (360)
T TIGR00858 170 ALAERYGAWLMVDDAHGTGVLGEDGRG-TLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRARTLIF 245 (360)
T ss_pred HHHHHcCcEEEEECcccccCcCCCCCc-hHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhCcccee
Confidence 9999999999999999732 111111 1122233222 4589999874 337788888887776532222 2
Q ss_pred CCCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHH
Q 017259 227 TFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 305 (374)
Q Consensus 227 ~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 305 (374)
+.+.++..++++.++++.... ++..++++++.+++.+.|+++. + .. ..+.+.++|+.++... +..++.+.
T Consensus 246 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~---~~~~~~~~~~~~~~~~---~~~~~~~~ 316 (360)
T TIGR00858 246 STALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG--F-TL---MPSCTPIVPVIIGDNA---SALALAEE 316 (360)
T ss_pred cCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC--C-cc---CCCCCCEEEEEeCCHH---HHHHHHHH
Confidence 334566667777888876543 2567888888888888887752 1 11 1235678888775432 57789999
Q ss_pred HHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 306 MKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 306 l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
|.++||.+.+. +.+++|++++..++++++++++++|+
T Consensus 317 l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 317 LQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 99999999642 24689999998899999999999873
No 148
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=4.7e-26 Score=214.68 Aligned_cols=305 Identities=15% Similarity=0.186 Sum_probs=210.3
Q ss_pred hHHHHHHHhccc-cC----cCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTL-SS----RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~-~~----~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++.+... .. ..+..+++++++++++++++.+..++.++|++++..++..+ ..+| |.|++.
T Consensus 54 ~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~-----~~~g-----d~vi~~ 123 (385)
T TIGR01825 54 EAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSAL-----LRKG-----DIVLSD 123 (385)
T ss_pred HHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHh-----CCCC-----CEEEEE
Confidence 456666654322 11 23556789999999999888777677778899999888877 5567 899988
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
.++|.... ......+ .....++..|++++++.++++. +++++++++++++++|.+.+ +++|.
T Consensus 124 ~~~~~~~~-~~~~~~g------------~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~ 186 (385)
T TIGR01825 124 ELNHASII-DGLRLTK------------ATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIV 186 (385)
T ss_pred ccccHHHH-HHHHhcC------------CceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHH
Confidence 88764432 2222211 1122233458888988887543 46889999999999999888 99999
Q ss_pred HHHHhcCCEEEEeccccC--CcccccCcccccCCCCCc----EEEecccccCCccchhhheeCHHHHhhcCCCCCC--CC
Q 017259 156 DLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--ST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~--~~~~g~~~~~~~~~~~~d----~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~~ 227 (374)
++|++||+++|+||+|+. +++.+.. ....++..++ +.||||+++ . +.||+++++++.+.+...... .+
T Consensus 187 ~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~--~-~gG~~~~~~~~~~~~~~~~~~~~~~ 262 (385)
T TIGR01825 187 ELAERYGAVTYVDDAHGSGVMGEAGRG-TVHHFGLEDKVDIQVGTLSKAIG--V-VGGYAAGHKELIEYLKNRARPFLFS 262 (385)
T ss_pred HHHHHhCCEEEEECcccccCcCCCCCc-cHhhcCCCcCCcEEEEeccHHhh--c-CCCEEecCHHHHHHHHHhCcccccc
Confidence 999999999999999974 3322321 1122222233 459999996 2 457788888888877543221 12
Q ss_pred CCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
...++..++++.++++.+.+ .+..++++++++++.+.|+++... +. .+.+.++.+.++... +..++++.|
T Consensus 263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~~---~~~~~~~~~~~~~~~---~~~~~~~~L 333 (385)
T TIGR01825 263 TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLGYD---TG---GSETPITPVVIGDEK---AAQEFSRRL 333 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---CC---CCCCCEEEEEECCHH---HHHHHHHHH
Confidence 23466778888888886643 356778888888888888765211 11 122345555443321 467899999
Q ss_pred HHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 307 KERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 307 ~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++||.++.. +...+|+++++.++++++++++++|+++++
T Consensus 334 ~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 334 FDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGK 380 (385)
T ss_pred HHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 9999988531 237899999999999999999999999987
No 149
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=224.33 Aligned_cols=296 Identities=13% Similarity=0.108 Sum_probs=189.6
Q ss_pred CCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
.++++.+++++.+.. ..++|++|+|+++++..++.++ .++| |+|+++.|+|..+...+...++...
T Consensus 188 ~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l-----~~~G-----d~Vli~~P~y~~y~~~~~~~g~~~v 257 (517)
T PRK13355 188 FSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSAL-----LDDG-----DEVLIPSPDYPLWTACVNLAGGTAV 257 (517)
T ss_pred HHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcCHHHHHHHCCCEEE
Confidence 334444555554322 3468999999999999999887 5677 9999999999887665554443322
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
... ...+..+ ..|++++++++. ++++++++++++||+|.+. +++.+++|.++|++||++||+||+|.++.
T Consensus 258 ~~~----~~~~~~~--~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~ 327 (517)
T PRK13355 258 HYR----CDEQSEW--YPDIDDIRSKIT---SRTKAIVIINPNNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLV 327 (517)
T ss_pred Eee----cCcccCC--CCCHHHHHHhcC---cCceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhc
Confidence 111 0010000 027899988876 5788888888899999888 79999999999999999999999999875
Q ss_pred ccccCc-ccccCCCCCc--E---EEeccccc-CCccchhhhee--CHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHH
Q 017259 176 RSGRML-ASDWEEVRPD--M---VILGKALG-GGVIPVSAVLA--DKE----VMLCIQPGEHGSTFGGNPLASAVAIASL 242 (374)
Q Consensus 176 ~~g~~~-~~~~~~~~~d--~---~s~sK~~~-~G~~~~G~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al 242 (374)
+.+..+ ... ...++ + .||||.++ +|+ |+||+++ +++ +.+.+... ....++.+.+++.++.+++
T Consensus 328 ~~~~~~~s~~--~~~~~~~vi~~~S~SK~~~~~G~-RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL 403 (517)
T PRK13355 328 MDGLEHTSIA--SLAPDLFCVTFSGLSKSHMIAGY-RIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTAL 403 (517)
T ss_pred CCCCCcccHH--HhCCCCeEEEEecchhhccCccc-ceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHh
Confidence 544321 111 11223 2 37899987 799 9999884 343 33333211 2233567888888888887
Q ss_pred HHHhh-hcHHHH---HHHHHHHHHHHHHHHHHhCCCceeeEEEEeee-EEEEeccCCC-chhHHHHHH-HHHHCCeEecc
Q 017259 243 DVIRD-EKLAER---SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF-NAVEFDKTAL-PVSAYDICL-KMKERGILAKP 315 (374)
Q Consensus 243 ~~~~~-~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~~~~-~l~~~Gi~v~~ 315 (374)
+.... +++.+. +.++++.+.+.| ..+|++ ....+.|.| +|+.++.... ..+..+++. .|.++||.+.|
T Consensus 404 ~~~~~~~~~~~~~~~~~~~r~~l~~~L----~~~~g~-~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~p 478 (517)
T PRK13355 404 GGHQSVKDYLVPGGRVYEQRELVYNAL----NAIPGI-SAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQ 478 (517)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHH----hcCCCc-ccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeC
Confidence 52110 122222 222233333333 333332 223344444 5546653210 012345554 56678999988
Q ss_pred C------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 316 T------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 316 ~------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+ ..+++||++ ..+++++++++++|+++++
T Consensus 479 g~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 479 GTGFNWDKPDHFRVVY--LPRLEDLEDAMDRLADFFS 513 (517)
T ss_pred cchhCCCCcCEEEEEe--CCCHHHHHHHHHHHHHHHH
Confidence 5 258999994 5789999999999999987
No 150
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=3.4e-26 Score=214.18 Aligned_cols=286 Identities=20% Similarity=0.205 Sum_probs=196.3
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++++.++++++. +++++|+|+++++..++..+ .++| |+|++.+|+|..+.......+..
T Consensus 64 y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~~-- 131 (367)
T PRK02731 64 YPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAY-----LGPG-----DEVIYSEHGFAVYPIAAQAVGAK-- 131 (367)
T ss_pred CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEEecCCHHHHHHHHHHcCCe--
Confidence 4444567899999998864 58999999999988887776 4567 99999999986554433322211
Q ss_pred ccccCCCCCCCceeccC----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 96 AIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
+..++. .|++++++.++ ++++++++++++|++|.+.+ .+.+.+|++.|+ +|+++|+||+|
T Consensus 132 -----------~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y 195 (367)
T PRK02731 132 -----------PVEVPAKDYGHDLDAMLAAVT---PRTRLVFIANPNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAY 195 (367)
T ss_pred -----------EEEecccCCCCCHHHHHHHhC---CCCcEEEEeCCCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcH
Confidence 111111 27888988886 47888888889999998884 555555555543 59999999999
Q ss_pred cCCccccc-CcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 172 SGLARSGR-MLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 172 ~~~~~~g~-~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
.++.+.+. .......+..++++ ||||.++ +|+ |+||+++++++.+.+.... .++..+.+++.++.++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~ 272 (367)
T PRK02731 196 AEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL-RVGYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALDDDA 272 (367)
T ss_pred HHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCccc-ceeeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhCCHH
Confidence 87644332 11222222234444 8999997 799 9999999999888876532 345667888888877775211
Q ss_pred h-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEE
Q 017259 247 D-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIV 321 (374)
Q Consensus 247 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~l 321 (374)
. ++..++++++.+.+.+.|++. ++.. .++.+.++|+.+++.. +..++++.|.++||.++++. ++++
T Consensus 273 ~~~~~~~~~~~~~~~l~~~L~~~-----g~~~-~~~~g~~~~i~~~~~~---~~~~~~~~L~~~gI~v~~~~~~~~~~~i 343 (367)
T PRK02731 273 FVEKSRALNAEGMAWLTEFLAEL-----GLEY-IPSVGNFILVDFDDGK---DAAEAYQALLKRGVIVRPVAGYGLPNAL 343 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-----CCcc-CCCCceEEEEECCCCC---CHHHHHHHHHHCCEEEEeCCCCCCCCeE
Confidence 0 123334444444444444443 2221 2345888998885443 67899999999999998863 4799
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+++ .+.+++++++++|+++++
T Consensus 344 Ris~---~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 344 RITI---GTEEENRRFLAALKEFLA 365 (367)
T ss_pred EEec---CCHHHHHHHHHHHHHHHh
Confidence 9994 378899999999998875
No 151
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5.6e-26 Score=214.96 Aligned_cols=302 Identities=13% Similarity=0.098 Sum_probs=203.1
Q ss_pred CCCCcHHHHHHHHhcccC----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..++++.+++++.+..| .+++++|+|+++|+..++..+ ..+| |.|++++|+|.++........+.
T Consensus 71 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-----~~~g-----d~vl~~~p~y~~y~~~~~~~~~~ 140 (402)
T PRK06107 71 GTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-----LEAG-----DEVIIPAPYWVSYPDMVLANDGT 140 (402)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEEecCCCcCHHHHHHHcCCE
Confidence 444566778888876653 457999999999999998766 5667 99999999987765443333222
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEecccc
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQS 172 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~-~i~li~Dea~~ 172 (374)
.... +...+.. .. .|++++++++. ++++++++++++|++|... +.+.+++|+++|++| ++++|+||+|+
T Consensus 141 ~~~v----~~~~~~~-~~-~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~~iI~De~y~ 210 (402)
T PRK06107 141 PVIV----ACPEEQG-FK-LTPEALEAAIT---PRTRWLILNAPSNPTGAVY-SRAELRALADVLLRHPHVLVLTDDIYD 210 (402)
T ss_pred EEEe----cCCcccC-CC-CCHHHHHhhcC---cCceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCeEEEEehhcc
Confidence 1111 1100000 00 26788888776 4677888887888999777 899999999999998 99999999999
Q ss_pred CCcccccCcc-c-cc-CCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 173 GLARSGRMLA-S-DW-EEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 173 ~~~~~g~~~~-~-~~-~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
++.+.+..+. . .. .+....+ .||||.++ +|+ |+||+++++++.+.+.......+++.+.+++.++..+++.
T Consensus 211 ~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~- 288 (402)
T PRK06107 211 HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW-RIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG- 288 (402)
T ss_pred ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc-ceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC-
Confidence 7644443211 1 11 1112233 37899998 899 9999999999998887655555677888999988887752
Q ss_pred hhhcH----HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC-----CCc---hhHHHHHHHHH-HCCeE
Q 017259 246 RDEKL----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT-----ALP---VSAYDICLKMK-ERGIL 312 (374)
Q Consensus 246 ~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~---~~~~~~~~~l~-~~Gi~ 312 (374)
.+.+ .+.++++.+.+.+.|+. +++.....+..|.++|+.++.. +.+ .+..++++.|+ ++||.
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~L~~----~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~ 363 (402)
T PRK06107 289 -DQSFVTESVAVYKQRRDYALALLNA----IPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVA 363 (402)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHhc----CCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEE
Confidence 1223 33344444444444443 2222222233467777766321 000 13457776665 67999
Q ss_pred eccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 313 AKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 313 v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+.|+. .+++||++. .+++++++++++|+++++ ++
T Consensus 364 v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~-~~ 401 (402)
T PRK06107 364 VVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVA-AL 401 (402)
T ss_pred EeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-hc
Confidence 99863 589999955 579999999999999987 54
No 152
>PRK06855 aminotransferase; Validated
Probab=99.95 E-value=5.5e-26 Score=216.51 Aligned_cols=306 Identities=15% Similarity=0.169 Sum_probs=190.9
Q ss_pred CCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccc-cC
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM-SC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~-~~ 92 (374)
+..++++.+++++.+.. ..+++++|+|+++++..++. + ..+| |.|++.+|+|+++....... +.
T Consensus 74 G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l-----~~~G-----d~Vlv~~P~Y~~~~~~~~~~~g~ 142 (433)
T PRK06855 74 GVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-L-----LRRE-----ARVIGPSPAYSTHSSAEAAHAGY 142 (433)
T ss_pred CCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-h-----cCCC-----CeEEEeCCCCchHHHHHHHhcCC
Confidence 33455666777666543 45689999999999988874 4 4567 99999999998854322211 21
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..... +...+..+ ..|+++|+++++++ ++++++++++++||||.+. +++.+++|.++|++||++||+||+|.
T Consensus 143 ~~v~v----~~~~~~~~--~~d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~ 214 (433)
T PRK06855 143 PPVTY----RLDPENNW--YPDLDDLENKVKYN-PSIAGILLINPDNPTGAVY-PKEILREIVDIAREYDLFIICDEIYN 214 (433)
T ss_pred eEEEE----ecccccCC--CCCHHHHHHHHhcC-CCceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEecccc
Confidence 11110 11000000 02789999988643 3567777778889999877 89999999999999999999999999
Q ss_pred CCcccccCc-cc-ccC-C-CCCcEEEeccccc-CCccchhhheeC-----H---HHHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 173 GLARSGRML-AS-DWE-E-VRPDMVILGKALG-GGVIPVSAVLAD-----K---EVMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 173 ~~~~~g~~~-~~-~~~-~-~~~d~~s~sK~~~-~G~~~~G~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
++.+.+..+ .. ... + ....+.||||.++ +|+ |+||++++ + .+.+.+..... ...+.+.++|.++.
T Consensus 215 ~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~ 292 (433)
T PRK06855 215 NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIP 292 (433)
T ss_pred ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHH
Confidence 875544321 11 111 1 1122349999997 899 99999862 2 23333332211 23456788888888
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCC------c----------------
Q 017259 240 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTAL------P---------------- 296 (374)
Q Consensus 240 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~------~---------------- 296 (374)
++++...-+++.++.+...++.++.+.+....+++ ....++ .|.++|+.++.... +
T Consensus 293 ~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~-~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (433)
T PRK06855 293 RIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPG-LKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKG 371 (433)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhc
Confidence 77753211223333333333333333333333322 222233 46788888864310 0
Q ss_pred --hhHHHHHHH-HHHCCeEeccCC-----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 297 --VSAYDICLK-MKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 297 --~~~~~~~~~-l~~~Gi~v~~~~-----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+..+++.. +.++||.+.|+. .+++||++.. .+++++++++++|+++++
T Consensus 372 ~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~ 428 (433)
T PRK06855 372 PVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIE 428 (433)
T ss_pred CCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHH
Confidence 024456655 457799998863 3569999654 478999999999999987
No 153
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=4.4e-26 Score=214.90 Aligned_cols=281 Identities=12% Similarity=0.126 Sum_probs=190.8
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC
Q 017259 35 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 114 (374)
Q Consensus 35 ~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 114 (374)
..+++++|+|+++|+..++..+ .++| |+|++.+|+|.+............... +...+... -.|
T Consensus 89 ~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~--~~~ 152 (388)
T PRK07337 89 APERIVVTAGASAALLLACLAL-----VERG-----DEVLMPDPSYPCNRHFVAAAEGRPVLV----PSGPAERF--QLT 152 (388)
T ss_pred ChHhEEEecCcHHHHHHHHHHh-----cCCC-----CEEEEeCCCchhhHHHHHHcCCEEEEe----ecCCccCC--cCC
Confidence 3468999999999999988877 5667 999999999987654443333221111 11100000 026
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEE-
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV- 193 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~- 193 (374)
++++++.+. ++++++++.+++|++|.+. +.+.+++|+++|++|++++|+||+|.++.+.+..... ....++++
T Consensus 153 ~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi~ 226 (388)
T PRK07337 153 AADVEAAWG---ERTRGVLLASPSNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVIT 226 (388)
T ss_pred HHHHHhhcC---ccceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEEE
Confidence 888888776 5778888888889999777 8999999999999999999999999987554432111 12234443
Q ss_pred --Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHH
Q 017259 194 --ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFK 267 (374)
Q Consensus 194 --s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~ 267 (374)
||||.++ +|+ |+||+++++++.+.+.........+.+.+++.++..+++.-..+ +.++.++++++.+.+.|++
T Consensus 227 ~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 305 (388)
T PRK07337 227 INSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES 305 (388)
T ss_pred EEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899997 799 99999999988888775433444566888888887776421111 2233444444444444444
Q ss_pred HHHhCCCcee-eEEEEeeeEEEEeccCC--CchhHHHHHHHHH-HCCeEeccCC-------CCEEEEecCCCCCHHHHHH
Q 017259 268 IQQQFPNYVK-EVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH-------DTIVRLTPPLSISSNELQE 336 (374)
Q Consensus 268 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~--~~~~~~~~~~~l~-~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~ 336 (374)
. +... ..+..|.++|+.++... ...+..++++.|+ ++||.+.|+. .+++|++++ .+++++++
T Consensus 306 ~-----~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~ 378 (388)
T PRK07337 306 L-----GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEE 378 (388)
T ss_pred c-----CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHH
Confidence 2 2221 12346889999886420 0014678888765 6799998742 479999965 46889999
Q ss_pred HHHHHHHHH
Q 017259 337 GSKALHDVL 345 (374)
Q Consensus 337 ~~~~l~~~~ 345 (374)
++++|.+++
T Consensus 379 ~l~rl~~~l 387 (388)
T PRK07337 379 AVARLGKLF 387 (388)
T ss_pred HHHHHHHHh
Confidence 999998765
No 154
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=5.9e-26 Score=218.35 Aligned_cols=295 Identities=13% Similarity=0.125 Sum_probs=194.2
Q ss_pred CCcHHHHHHHHhccc------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMF------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++++.+++.+.+.. ..++|++|+|+++|++.++..+ ..+| |.|++..|+|.++........+.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l-----~~pG-----D~Vlv~~P~Y~~~~~~~~~~~G~ 166 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCL-----ADPG-----DVFLIPSPYYAAFDRDLRWRTGV 166 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHh-----CCCC-----CEEEECCCCccchHHHHHhhCCC
Confidence 445566666666542 3568999999999999999988 5677 99999999998876543322221
Q ss_pred ccccccCCCCCCCceeccC-------CCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 017259 94 NEAIRGFGPLLPGHLKVDF-------GDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI 163 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i 163 (374)
.+..+++ .|+++++++++. .+.+++++++++++||+|.+. +++.+++|+++|++||+
T Consensus 167 ------------~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~-s~e~l~~L~~~a~~~~i 233 (496)
T PLN02376 167 ------------EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTML-DKDTLTNLVRFVTRKNI 233 (496)
T ss_pred ------------EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCC
Confidence 1111111 167888766542 235789888888999999887 89999999999999999
Q ss_pred EEEEeccccCCcccccCc-ccc-cC---C---CCCc----EEEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCCC
Q 017259 164 LMIADEIQSGLARSGRML-ASD-WE---E---VRPD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFG 229 (374)
Q Consensus 164 ~li~Dea~~~~~~~g~~~-~~~-~~---~---~~~d----~~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~ 229 (374)
+||+||+|.++.+.+..+ +.. .. . ..++ +.||||.++ +|+ |+||+++ ++.+.+.++.. .....
T Consensus 234 ~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGl-RvG~li~~~~~l~~~~~~~--~~~~~ 310 (496)
T PLN02376 234 HLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGF-RVGIVYSFNDSVVSCARKM--SSFGL 310 (496)
T ss_pred EEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcc-eEEEEEECCHHHHHHHHHH--hhcCC
Confidence 999999999865444322 111 10 1 1223 238999998 899 9999988 45555554321 12224
Q ss_pred CCHHHHHHHHHHHHHHhh-hcH----HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----chhHH
Q 017259 230 GNPLASAVAIASLDVIRD-EKL----AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----PVSAY 300 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~-~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~ 300 (374)
.+.+++.++.+.++.-.- +++ .++++++.+.+.+.|++. ++.......|.|+|++++.... .....
T Consensus 311 vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-----gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~ 385 (496)
T PLN02376 311 VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-----DIACLTSNAGLFAWMDLRHLLRDRNSFESEI 385 (496)
T ss_pred CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCceEEEEEEchhhhccCCchhHHH
Confidence 577777777666642110 122 222333333333333332 2222223457999998864210 11236
Q ss_pred HHHHHHHHC-CeEeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 301 DICLKMKER-GILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 301 ~~~~~l~~~-Gi~v~~~~------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++++.++++ ||.+.|+. ++++||++.. .++++++.++++|++++.
T Consensus 386 ~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 386 ELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHH
Confidence 788888875 99999862 5799999552 467999999999999986
No 155
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=6e-26 Score=213.89 Aligned_cols=296 Identities=15% Similarity=0.196 Sum_probs=193.7
Q ss_pred HHHHHHHHhcccCC----C-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 23 FPVFAERLTSMFGY----D-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 23 ~~~l~~~l~~~~~~----~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
++.+++++.+.+|. + ++++|+|+++|+..++..+ ..+| |+|++..|+|+++...+...+......
T Consensus 67 r~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-----~~~g-----d~vli~~p~y~~~~~~~~~~g~~~~~~ 136 (387)
T PRK07777 67 RAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGL-----VEPG-----DEVLLIEPYYDSYAAVIAMAGAHRVPV 136 (387)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-----cCCC-----CEEEEeCCCchhhHHHHHHCCCEEEEe
Confidence 33444444443443 3 6999999999999988876 4567 999999999987654433332211111
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 177 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~ 177 (374)
+....-.... .|++++++.+. ++++++++++++|++|... +.+.+++|.++|++|++++|+||+|.++.+.
T Consensus 137 ----~~~~~~~~~~-~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~ 207 (387)
T PRK07777 137 ----PLVPDGRGFA-LDLDALRAAVT---PRTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFD 207 (387)
T ss_pred ----ecCCccCCCc-CCHHHHHHhcC---cccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccC
Confidence 1111000000 27888888776 4688889988889999877 8999999999999999999999999976543
Q ss_pred ccC-cccccC-CCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--hc
Q 017259 178 GRM-LASDWE-EVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EK 249 (374)
Q Consensus 178 g~~-~~~~~~-~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~ 249 (374)
+.. .....+ +...+ +.||||.++ +|+ |+||+++++++.+.+.......++..+.+.+.++..++..... ..
T Consensus 208 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 286 (387)
T PRK07777 208 GARHLPLATLPGMRERTVTISSAAKTFNVTGW-KIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAA 286 (387)
T ss_pred CCCcccHhhCCCCcCcEEEEeechhhccCcCc-eeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHH
Confidence 331 121111 11112 348999998 799 9999999998888777544444566666677666666542111 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC---------CC
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH---------DT 319 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~---------~~ 319 (374)
+.+.++++.+.+.+.|+.. +........+.++|+.++... ..+..++++.|+ ++||.+.|+. .+
T Consensus 287 ~~~~~~~~~~~l~~~L~~~-----~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~ 360 (387)
T PRK07777 287 LRDSLQAKRDRLAAGLAEA-----GFEVHDSAGTYFLCADPRPLG-YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNH 360 (387)
T ss_pred HHHHHHHHHHHHHHHHHhC-----CCCccCCCcceEEEecccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCC
Confidence 3455555555565555543 121112224566676664210 015689999997 5799998752 35
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 320 IVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 320 ~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++||+++ .+++++++++++|+++..
T Consensus 361 ~~Ri~~~--~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 361 LVRFAFC--KRDDTLDEAIRRLRALRG 385 (387)
T ss_pred eEEEEec--CCHHHHHHHHHHHHHHhc
Confidence 8999954 578999999999987653
No 156
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=4.2e-26 Score=214.91 Aligned_cols=296 Identities=14% Similarity=0.158 Sum_probs=196.6
Q ss_pred CCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 19 YNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
..++++.+++++.+.. ..+++++|+|+++|+..++.++ .++| |+|++.+|+|.++.......+...
T Consensus 69 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~ 138 (386)
T PRK07550 69 LPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTL-----AGAG-----DEVILPLPWYFNHKMWLDMLGIRP 138 (386)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-----cCCC-----CEEEEcCCCCcchHHHHHhcCCEE
Confidence 3344555666665543 3468999999999999998887 4567 999999999976644333222211
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +...+. .. ..|++++++.++ ++++++++++++|++|.+. +.+.+++|.++|++||++||+||+|++|
T Consensus 139 ~~v----~~~~~~-~~-~~~~~~l~~~~~---~~~~~v~~~~P~NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~ 208 (386)
T PRK07550 139 VYL----PCDEGP-GL-LPDPAAAEALIT---PRTRAIALVTPNNPTGVVY-PPELLHELYDLARRHGIALILDETYRDF 208 (386)
T ss_pred EEE----ecCCCc-CC-CCCHHHHHHHhc---ccCcEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhh
Confidence 111 110000 00 016888998887 3577777777788888877 7999999999999999999999999977
Q ss_pred ccccc-Cc-ccccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-
Q 017259 175 ARSGR-ML-ASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD- 247 (374)
Q Consensus 175 ~~~g~-~~-~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~- 247 (374)
...+. .. .....+...+ +.||||.++ +|+ |+||+++++++++.+.......+.+.+.+++.++..+++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 287 (386)
T PRK07550 209 DSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGH-RVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADW 287 (386)
T ss_pred ccCCCCCcchhhCCCccccEEEEecchhhccCccc-ceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHH
Confidence 43221 11 1111111222 349999998 799 9999999998888877554445566788888888777764321
Q ss_pred -hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CCCchhHHHHHHHHH-HCCeEeccC------CC
Q 017259 248 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKMK-ERGILAKPT------HD 318 (374)
Q Consensus 248 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~------~~ 318 (374)
++.+++++++.+++.+.|+.. +.+ ...+..+.++|+.++. .. +..+++++|+ ++||.+.|+ ..
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~g~~~~~~~~~~~~~---~~~~l~~~l~~~~gv~v~pg~~f~~~~~ 359 (386)
T PRK07550 288 RAGNRAEIARRRDAFRAVFARL----PGW-ELLASGAYFAYVRHPFPDR---PSREVARRLAKEAGILCLPGTMFGPGQE 359 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCc-eeCCCceEEEEecCCCCCC---CHHHHHHHHHHhcCEEEeCchhhCCCCC
Confidence 123344444555555544432 122 1123346777877764 32 6788999876 579999885 25
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
+++||+++. .+++++++++++|++.
T Consensus 360 ~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 360 GYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred CEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 799999653 4688999999998764
No 157
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=7.4e-26 Score=210.44 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=193.1
Q ss_pred CCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...+|++.+++++ ..+++++|+|+++++..+++++. + ++|++.+|+|+.+...+...+..
T Consensus 51 Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~~-------~-----~~v~i~~P~y~~~~~~~~~~g~~-- 116 (354)
T PRK06358 51 YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVTK-------P-----KKVLILAPTFAEYERALKAFDAE-- 116 (354)
T ss_pred CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhC-------C-----CcEEEecCChHHHHHHHHHcCCe--
Confidence 44445677888888877 55689999999999998887651 1 67999999998766554433321
Q ss_pred ccccCCCCCCCceeccC-------CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 96 AIRGFGPLLPGHLKVDF-------GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
+..++. .| +++.+.+. ++++++++.+++||+|... +++.+++|.++|++||++||+|
T Consensus 117 -----------~~~~~~~~~~~~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~D 180 (354)
T PRK06358 117 -----------IEYAELTEETNFAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLI-SKEEMKKILDKCEKRNIYLIID 180 (354)
T ss_pred -----------eEEEeCccccCCCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCcc-CHHHHHHHHHHHHhcCCEEEEe
Confidence 111111 13 34444443 3577777777789999877 8999999999999999999999
Q ss_pred ccccCCcccccCcc-cccCCCCCcE---EEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Q 017259 169 EIQSGLARSGRMLA-SDWEEVRPDM---VILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASL 242 (374)
Q Consensus 169 ea~~~~~~~g~~~~-~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al 242 (374)
|+|.+|...+.... .......+.+ -||||.++ +|+ |+||+++ ++.+.+.+.... ..++.+.+++.++.+++
T Consensus 181 e~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG~lv~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l 257 (354)
T PRK06358 181 EAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLGYGLTSNKNLAEKLLQMR--EPWSINTFADLAGQTLL 257 (354)
T ss_pred CcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hheeeecCCHHHHHHHHHhC--CCCcchHHHHHHHHHHh
Confidence 99998755443211 1112222333 39999999 899 9999987 467777776432 35677888888888877
Q ss_pred HHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----
Q 017259 243 DVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---- 317 (374)
Q Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---- 317 (374)
+.-.- .+..+.++++++++.+.|++ +++ .....+.|.|+|+.+++ ..++++.|.++||.++++.
T Consensus 258 ~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~-~~~~~~~g~f~~~~~~~------~~~~~~~l~~~gI~v~~~~~f~~ 326 (354)
T PRK06358 258 DDKEYIKKTIQWIKEEKDFLYNGLSE----FKG-IKVYKPSVNFIFFKLEK------PIDLRKELLKKGILIRSCSNYRG 326 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhc----CCC-cEEcCCcceEEEEEcCc------hHHHHHHHHHCCeEEEECCCCCC
Confidence 52100 12234444444444444433 322 22234467788887763 3689999999999998852
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
.+++|++ ..++++.++++++|++++
T Consensus 327 ~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 327 LDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 4689999 668899999999998765
No 158
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=4.4e-26 Score=213.06 Aligned_cols=281 Identities=16% Similarity=0.107 Sum_probs=189.5
Q ss_pred CCCCcHHHHHHHHhccc-----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMF-----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~-----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+...+++.+++++.+.+ ..+++++|+|+++++..++.++. ..+| |.|++.+|+|.++...+...+.
T Consensus 63 G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~----~~~g-----d~Vl~~~p~y~~~~~~~~~~g~ 133 (364)
T PRK07865 63 GTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLG----LGPG-----DVVVIPELAYPTYEVGARLAGA 133 (364)
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHc----CCCC-----CEEEECCCCcccHHHHHHhcCC
Confidence 33455666777776543 35689999999999988776662 3567 9999999999776544433321
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+.++++++++. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.
T Consensus 134 ---------------~~~~~~~~~~l~~------~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~ 191 (364)
T PRK07865 134 ---------------TVVRADSLTELGP------QRPALIWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYL 191 (364)
T ss_pred ---------------EEEecCChhhCCc------ccceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchh
Confidence 1222234444332 4678888888899999888 79999999999999999999999999
Q ss_pred CCcccccCccc-ccC--C-CCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017259 173 GLARSGRMLAS-DWE--E-VRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 244 (374)
Q Consensus 173 ~~~~~g~~~~~-~~~--~-~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~ 244 (374)
++...+..... ... + .... +.||||.++ +|+ |+||+++++++.+.+........++.+.+.+.++.++++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 270 (364)
T PRK07865 192 ELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY-RAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD 270 (364)
T ss_pred hhccCCCCCccccccccCCccceEEEEeechhccCCCce-eeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC
Confidence 77554432211 110 1 1122 338999996 799 9999999999888877544444566788888877776653
Q ss_pred Hhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC------C
Q 017259 245 IRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------H 317 (374)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~ 317 (374)
... +..++.++++.+.+.+.|+.. ++.......+.++|+.++. +..++.+.|.++||.+.|+ .
T Consensus 271 ~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gv~v~pg~~f~~~~ 340 (364)
T PRK07865 271 DAHVREQRERYARRRAVLRPALEAA-----GFRVDHSEAGLYLWATRGE-----DCWDTVAWLAERGILVAPGDFYGPAG 340 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCccEEEEEeCCC-----CHHHHHHHHHHCCEEEeCccccCcCC
Confidence 110 123344445555555555443 2221112235566766532 4567889999999999874 2
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 318 DTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
++++||++. .+++++++++++|+
T Consensus 341 ~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 341 AQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred CCEEEEEec--CCHHHHHHHHHHhh
Confidence 579999954 47899999999885
No 159
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6e-26 Score=210.98 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=196.2
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++++.++++++. +++++|+|+++++..++.++ .++| |+|++.+|+|..+...+...+....
T Consensus 56 y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~ 125 (351)
T PRK14807 56 YPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF-----INKG-----DVVIYPHPSFAMYSVYSKIAGAVEI 125 (351)
T ss_pred CCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh-----cCCC-----CEEEEeCCChHHHHHHHHHcCCeEE
Confidence 4455678899999998754 68999999999999988877 5677 9999999999765443333322211
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+.. .|+++++++++. .+++++++++++|++|...+ .+++.++|++++.++|+||+|.++.
T Consensus 126 ~v----~~~~~~~----~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~ 191 (351)
T PRK14807 126 PV----KLKEDYT----YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY 191 (351)
T ss_pred Ee----ecCCCCC----CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc
Confidence 11 1100000 268899888863 26888888889999999987 7888888888888999999998763
Q ss_pred ccccCcccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHH
Q 017259 176 RSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 251 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~ 251 (374)
+.... ......+++ -||||.++ +|+ |+||+++++++.+.+..... .++.+.+++.++..+++...-++..
T Consensus 192 --~~~~~-~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~ 265 (351)
T PRK14807 192 --GNTIV-DVINEFENLIVLRTLSKAFGLAGL-RVGYAVANENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERV 265 (351)
T ss_pred --ccchH-HHhhhCCCEEEEecchHhcccchh-ceeeeecCHHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHH
Confidence 22111 111112233 38999998 899 99999999999888875322 3566888888888877642112333
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCEEEEecC
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPP 326 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~lRi~~~ 326 (374)
+.++++++++.+.|++ +++. ...++.+.++|+.++ +..++++.|.++||.+++.. .+++||++
T Consensus 266 ~~~~~~r~~l~~~l~~----~~g~-~~~~~~~~~~~i~~~------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~- 333 (351)
T PRK14807 266 NYILNERERLIKELSK----IPGI-KVYPSKTNFILVKFK------DADYVYQGLLERGILVRDFSKVEGLEGALRITV- 333 (351)
T ss_pred HHHHHHHHHHHHHHHh----CCCc-EECcCCccEEEEEcC------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEc-
Confidence 4444455555554433 2332 223445778887765 35789999999999997642 57999993
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALHDVL 345 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~ 345 (374)
.+.++.+++++.|++++
T Consensus 334 --~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 334 --SSCEANDYLINGLKELL 350 (351)
T ss_pred --CCHHHHHHHHHHHHHhh
Confidence 46788899999998764
No 160
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.4e-26 Score=214.31 Aligned_cols=296 Identities=16% Similarity=0.168 Sum_probs=196.0
Q ss_pred cHHHHHHHHhccc----C----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 22 KFPVFAERLTSMF----G----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 22 ~~~~l~~~l~~~~----~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
...+|++.+++++ + .+++++|+|+++|+..++..+ ..+| ++|++.+|+|.++...+...+..
T Consensus 69 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~-----~~~g-----d~vl~~~p~y~~~~~~~~~~g~~ 138 (393)
T PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL-----LDPG-----DEVIIPAPYWVSYPEMVKLAGGV 138 (393)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh-----cCCC-----CEEEecCCCCcchHHHHHHcCCE
Confidence 3455555555543 3 357999999999999998887 4566 99999999997765444333221
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.... +...+. .. ..|+++++++++ ++++++++++++|++|.+. +.+.+++|.++|++||+++|+||+|.+
T Consensus 139 ~~~~----~~~~~~-~~-~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~ 208 (393)
T PRK05764 139 PVFV----PTGEEN-GF-KLTVEQLEAAIT---PKTKALILNSPSNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEK 208 (393)
T ss_pred EEEE----ecCccc-CC-cCCHHHHHHhhC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccc
Confidence 1111 110000 00 016788988886 4678888888888898877 789999999999999999999999987
Q ss_pred CcccccC-ccccc--CCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 174 LARSGRM-LASDW--EEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 174 ~~~~g~~-~~~~~--~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
+...+.. ..... .+.... +.||||.++ +|+ |+||+++++++.+.+...........+.+++.++..+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-- 285 (393)
T PRK05764 209 LVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-- 285 (393)
T ss_pred eeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--
Confidence 6443321 11111 111122 337999999 799 9999999999988886543344556788888888777752
Q ss_pred hhc----HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC--chhHHHHHHHHHH-CCeEeccCC--
Q 017259 247 DEK----LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKE-RGILAKPTH-- 317 (374)
Q Consensus 247 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~-~Gi~v~~~~-- 317 (374)
.++ ..++++++.+.+.+.|++ ++++.......+.++|+.++.... +.+..++.+.|++ +||.+.++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f 361 (393)
T PRK05764 286 PQDEVEEMRQAFEERRDLMVDGLNE----IPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAF 361 (393)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhh----CCCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEcccccc
Confidence 122 333444444444444443 222221122234566777754310 1124788888864 699998863
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++ ..+++++++++++|.++++
T Consensus 362 ~~~~~vRis~--~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 362 GAPGYVRLSY--ATSLEDLEEGLERIERFLE 390 (393)
T ss_pred CCCCEEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 48999994 4689999999999999887
No 161
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=2.3e-26 Score=214.24 Aligned_cols=280 Identities=17% Similarity=0.112 Sum_probs=190.6
Q ss_pred CCCCcHHHHHHHHhccc-----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMF-----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~-----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+..++++++++++.+.+ ..+++++|+|+++++..++.++. .++| |.|++.+|+|.++...+...+.
T Consensus 57 G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~----~~~g-----d~Vl~~~p~y~~~~~~~~~~g~ 127 (357)
T TIGR03539 57 GTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG----LGPG-----DTVVIPELAYPTYEVGALLAGA 127 (357)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHc----CCCC-----CEEEECCCCcHHHHHHHHhcCC
Confidence 44566677777776653 34689999999999998877663 4567 9999999999776544333221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+.+++++.++ . ++++++++++++||+|... +.+.+++|.++|++||++||+||+|.
T Consensus 128 ---------------~~~~v~~~~~l~----~--~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~ 185 (357)
T TIGR03539 128 ---------------TPVAADDPTELD----P--VGPDLIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYL 185 (357)
T ss_pred ---------------EEeccCChhhcC----c--cCccEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchh
Confidence 122223443332 1 4788999999999999888 89999999999999999999999998
Q ss_pred CCcccccCccc-cc--C-CCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017259 173 GLARSGRMLAS-DW--E-EVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV 244 (374)
Q Consensus 173 ~~~~~g~~~~~-~~--~-~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~ 244 (374)
++.+.+..... .. . +.... +-||||.++ +|+ |+||+++++++.+.+........++.+.+++.++.++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~-R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 264 (357)
T TIGR03539 186 ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY-RAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD 264 (357)
T ss_pred hhccCCCCccceecccCCCccccEEEEeccccccCCCce-eEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC
Confidence 77554432111 10 0 01112 238999986 799 9999999999888876543444567788888888777743
Q ss_pred Hh-hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------
Q 017259 245 IR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------ 317 (374)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------ 317 (374)
.. .....+.++++.+.+.+.|++. ++.......+.++|+.++. +..++.+.|.++||.+.|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~L~~~-----g~~~~~p~~~~~~~~~~~~-----~~~~~~~~l~~~gV~v~pg~~f~~~~ 334 (357)
T TIGR03539 265 DGHVAEQKARYAARRAQLKPALEKA-----GFRIDHSEAGLYLWATRGE-----DAWDTVDRLAELGILVAPGDFYGPAG 334 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCcCCCccEEEEEECCC-----CHHHHHHHHHhCCEEECCccccCCCC
Confidence 11 0123444555555555555443 2211122245566665543 46789999999999998853
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHH
Q 017259 318 DTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
.+++||+++ .+++++++++++|
T Consensus 335 ~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 335 SQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred CCeEEEEec--CCHHHHHHHHHhh
Confidence 579999954 4788999998876
No 162
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=212.41 Aligned_cols=297 Identities=15% Similarity=0.209 Sum_probs=196.0
Q ss_pred CcHHHHHHHHhccc-------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 21 DKFPVFAERLTSMF-------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 21 ~~~~~l~~~l~~~~-------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
....++.+.+++++ ..+++++|+|+++|+..++..+ ..+| |+|++.+|+|..+.......+..
T Consensus 66 ~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~ 135 (397)
T PRK07568 66 QGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI-----CDPG-----DEILVPEPFYANYNGFATSAGVK 135 (397)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh-----cCCC-----CEEEEecCCCccHHHHHHHcCCE
Confidence 34555666666653 4568999999999999998877 4567 99999999987654333222211
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
... .+...+ ......++++++++++ ++++++++++++|++|.+. +.+.+++|.++|+++|++||+||+|.+
T Consensus 136 ~~~----v~~~~~-~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~ 206 (397)
T PRK07568 136 IVP----VTTKIE-EGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYRE 206 (397)
T ss_pred EEE----eecCcc-cCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchh
Confidence 110 011000 0011125688888776 4688888888888899777 899999999999999999999999998
Q ss_pred CcccccCc-cc-ccCCCCCcEE---Eeccccc-CCccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 174 LARSGRML-AS-DWEEVRPDMV---ILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 174 ~~~~g~~~-~~-~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
+.+.+..+ .. ...+..+.++ ||||.++ +|+ |+||++++ +++.+.+..... ..++.+.+.+.++..+++...
T Consensus 207 ~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~ 284 (397)
T PRK07568 207 FVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPE 284 (397)
T ss_pred cccCCCCccChhhcCCCcCCEEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCH
Confidence 86554321 11 1112233333 8999999 599 99998874 677766543222 246778888888877775321
Q ss_pred h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCCchhHHHHHHHHHH------CCeEeccCC
Q 017259 247 D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKE------RGILAKPTH 317 (374)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~ 317 (374)
. +++.+.++++.+.+.+.|++ +++ +....+ .+.++|+.++.. +..++++.|.+ +||.+.|+.
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~p~g~~~~~~~l~~~----~~~~~~~~l~~~~~~~~~gv~v~pg~ 355 (397)
T PRK07568 285 SYFDEVREEYKKRRDILYEELNK----IPG-VVCEKPKGAFYIIAKLPVD----DAEDFAKWLLTDFNYNGETVMVAPAS 355 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCC-ceecCCCcceEEEEecCCC----CHHHHHHHHHhhcccccceEEEeCch
Confidence 1 12333444444445444433 222 222223 355678877653 56788898876 599998741
Q ss_pred ---------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 318 ---------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 318 ---------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+++|+++. .+++++++++++|+++++ +..
T Consensus 356 ~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~-~~~ 394 (397)
T PRK07568 356 GFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALE-KYN 394 (397)
T ss_pred HhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHH-Hhh
Confidence 369999954 568999999999999998 653
No 163
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=6.2e-26 Score=214.19 Aligned_cols=291 Identities=13% Similarity=0.076 Sum_probs=192.1
Q ss_pred CCcHHHHHHHHhccc------CCC-eEEecCChHHHHHHHHHHHHHcccccccCCCCcc--EEEEeccCCCCcccccccc
Q 017259 20 NDKFPVFAERLTSMF------GYD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEA--IIVSCCGCFHGRTLAAISM 90 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~--~vi~~~~~yhg~~~~~~~~ 90 (374)
.++++.+++++.+.+ ..+ ++++|+|+++++..+++++ ..+| | .|++..|+|.++...+...
T Consensus 67 ~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l-----~~~g-----d~~~vlv~~P~y~~~~~~~~~~ 136 (393)
T TIGR03538 67 PELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAV-----INPG-----QAPLVVMPNPFYQIYEGAALLA 136 (393)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHH-----cCCC-----CcceEEecCCCCcchHHHHHhc
Confidence 445555666665542 233 6899999999999999988 4556 5 4999999997765544333
Q ss_pred cCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 91 SCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
+...... +...+..+ ..|++++++++. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+
T Consensus 137 g~~~~~v----~~~~~~~~--~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~ 206 (393)
T TIGR03538 137 GAEPYFL----NCTAENGF--LPDFDAVPESVW---RRCQLLFVCSPGNPTGAVL-SLDTLKKLIELADQYGFIIASDEC 206 (393)
T ss_pred CCeEEEe----eccccCCC--CCCHHHHHHHHh---hcceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCEEEEECcc
Confidence 3221111 11000000 016888888776 3688888888899999877 899999999999999999999999
Q ss_pred ccCCccccc--Cccc----ccCC--CCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHH
Q 017259 171 QSGLARSGR--MLAS----DWEE--VRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVA 238 (374)
Q Consensus 171 ~~~~~~~g~--~~~~----~~~~--~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 238 (374)
|.++.+.+. .... ...+ ..+.+ .||||.++ +|+ |+||+++++++++.+.......+++.+.+.+.++
T Consensus 207 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~Gl-RvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~ 285 (393)
T TIGR03538 207 YSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGL-RSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLAS 285 (393)
T ss_pred hhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCccc-ceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHH
Confidence 997644321 1110 0111 11223 38999876 799 9999999998888876543334556677888877
Q ss_pred HHHHHHHh-hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccC
Q 017259 239 IASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT 316 (374)
Q Consensus 239 ~~al~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~ 316 (374)
.+++..-. -....+.++++.+.+.+.|+.. + .+ ..+..|.++|+.++ . +..++++.|+ ++||.+.|+
T Consensus 286 ~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---~-~~--~~p~gg~f~~~~~~-~----~~~~~~~~l~~~~gV~v~pg 354 (393)
T TIGR03538 286 IAAWNDEQHVRENRALYREKFAAVLEILGQV---L-DL--ELPDAGFYLWPKVP-G----DDEAFARALYEEENVTVLPG 354 (393)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---C-cc--cCCCeeEEEEEECC-C----CHHHHHHHHHHHCCEEEeCC
Confidence 76663200 0122334444444555544432 1 11 13456888898887 2 4578998886 579999765
Q ss_pred C------------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 317 H------------DTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 317 ~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
. .+++||++. .+++++++++++|++.
T Consensus 355 ~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 355 RFLAREAEGVNPGEGRVRIALV--APLEECVEAAERIRSF 392 (393)
T ss_pred ccccccccCCCCCCCEEEEEec--CCHHHHHHHHHHHHHh
Confidence 2 368999944 5789999999998764
No 164
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.8e-26 Score=212.25 Aligned_cols=287 Identities=16% Similarity=0.194 Sum_probs=194.2
Q ss_pred CCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.....+|.+.+++++ ..+++++|+|+++++..+++++ .++| |.|++.+|+|..+.......+....
T Consensus 62 Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~-----~~~g-----d~V~v~~P~y~~~~~~~~~~g~~~~ 131 (357)
T PRK14809 62 YPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAM-----LDPG-----DTVLVPDPGFAYYGMSARYHHGEVR 131 (357)
T ss_pred CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh-----cCCC-----CEEEEeCCChHHHHHHHHHcCCeEE
Confidence 33445667888888877 4568999999999999998887 5677 9999999998644433222221111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+. ... .+.+++++.. ++++++++++++||+|.+. +.+.+++|+++|++ +++||+||+|.+|.
T Consensus 132 ~~----~l~~~~-~~~-~~~~~~~~~~----~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~ 199 (357)
T PRK14809 132 EY----PVSKAD-DFE-QTADTVLDAY----DGERIVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFA 199 (357)
T ss_pred EE----ecccCc-CCC-cCHHHHHHhh----cCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhcc
Confidence 00 110000 000 1455555443 2567888888999999888 78888888888865 78999999999875
Q ss_pred ccccCccc-ccCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHH
Q 017259 176 RSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 253 (374)
Q Consensus 176 ~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~ 253 (374)
..+..... ...+....+.||||.++ +|+ |+||+++++++++.+... ..+++.+.+++.++.++++ ++++.++
T Consensus 200 ~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~~ 273 (357)
T PRK14809 200 ERPSAVALVEERDDVAVLRTFSKAYGLAGL-RLGYAVVPEEWADAYARV--NTPFAASELACRAGLAALD---DDEHVER 273 (357)
T ss_pred CCchhHHHHhhCCCEEEEecchhHhcCcch-hheeeecCHHHHHHHHHh--CCCCCCCHHHHHHHHHHhC---CHHHHHH
Confidence 43321111 11111122349999998 799 999999999998888753 2466778888888887774 2344444
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEEecCCCC
Q 017259 254 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSI 329 (374)
Q Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi~~~~~~ 329 (374)
.++..+..++.+.+..... ..++.|+++|+.++ +..++++.|.++||.+.++. .+++|+++ .
T Consensus 274 ~~~~~~~~r~~l~~~L~~~-----~~~~~g~f~~~~~~------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~---~ 339 (357)
T PRK14809 274 TVETARWAREYIREELDAP-----TWESAGNFVLAEVG------DASAVAEAAQERGVIVRDCTSFGLPECIRITC---G 339 (357)
T ss_pred HHHHHHHHHHHHHHHhcCc-----cCCCCCCEEEEECC------CHHHHHHHHHHCCEEEEECccCCCCCeEEEec---C
Confidence 4444444444444433221 12356788888764 35789999999999999864 57999994 3
Q ss_pred CHHHHHHHHHHHHHHHh
Q 017259 330 SSNELQEGSKALHDVLE 346 (374)
Q Consensus 330 ~~e~i~~~~~~l~~~~~ 346 (374)
+++++++++++|+++++
T Consensus 340 ~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 340 TREETERAVEVLNEVLA 356 (357)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 57899999999998875
No 165
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=1.3e-25 Score=212.33 Aligned_cols=298 Identities=13% Similarity=0.090 Sum_probs=191.9
Q ss_pred CCcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 20 NDKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.+...+|++.+++++ ..+++++|+|+++|+..++.++ .++| |.|++..|+|.++...+...+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~-----~~~g-----d~Vl~~~p~y~~~~~~~~~~g 138 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL-----LDPG-----DEILIPGPSYPPYTGLVKFYG 138 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHHcC
Confidence 344455555555543 3458999999999999999887 5677 999999999987765554443
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
....... +...+ ... .|++++++.+. ++++++++++++|++|.+. +.+.+++|.++|+++|++||+||+|
T Consensus 139 ~~~v~~~---~~~~~--~~~-~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay 208 (398)
T PRK08363 139 GVPVEYR---TIEEE--GWQ-PDIDDIRKKIT---EKTKAIAVINPNNPTGALY-EKKTLKEILDIAGEHDLPVISDEIY 208 (398)
T ss_pred CEEEEec---ccccc--CCc-CCHHHHHhhCC---cceEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhh
Confidence 3222110 10000 000 26888888775 4688888888899999887 7999999999999999999999999
Q ss_pred cCCcccccCcccccCCCCCcE---EEeccccc-CCccchhhhee--CHHHHhhcCCCC---CCCCCCCCHHHHHHHHHHH
Q 017259 172 SGLARSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLA--DKEVMLCIQPGE---HGSTFGGNPLASAVAIASL 242 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~aa~~al 242 (374)
.++...+.............+ .||||.++ +|+ |+||+++ ++++.+.+.... ....++.+.+++.++.+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l 287 (398)
T PRK08363 209 DLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGW-RLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGL 287 (398)
T ss_pred hhhccCCcccCHHHcCcCCcEEEEecchhccCCccc-eEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHH
Confidence 976444432121111112223 38999966 799 9999887 665555443211 1224567888888888777
Q ss_pred HHHhh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCCchhHHHHH-HHHHHCCeEeccCC-
Q 017259 243 DVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDIC-LKMKERGILAKPTH- 317 (374)
Q Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~- 317 (374)
....+ .+..++++++.+.+.+.|++ +++. ....+ .+.++|+.++.... .+..+++ +.|.++||.+.++.
T Consensus 288 ~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~-~~~~p~g~~~~~~~l~~~~~-~~~~~~~~~~l~~~gV~v~~g~~ 361 (398)
T PRK08363 288 TGPMDYLEEYMKKLKERRDYIYKRLNE----IPGI-STTKPQGAFYIFPRIEEGPW-KDDKEFVLDVLHEAHVLFVHGSG 361 (398)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHHhc----CCCC-EecCCCeEEEEEEEeccCCC-CCHHHHHHHHHHhCCEEEeCchh
Confidence 53111 12334444444444444433 3222 22233 34555556654100 0234554 45678899998852
Q ss_pred -----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++++||++ ..+++++++++++|++++.
T Consensus 362 f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 362 FGEYGAGHFRLVF--LPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred hCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 47999995 4678999999999999887
No 166
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=211.10 Aligned_cols=286 Identities=13% Similarity=0.158 Sum_probs=195.4
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...+|++.++++++ .+++++|+|+++++..++.++ .++| |+|++.+|+|..+...+...+....
T Consensus 83 Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~-----~~~g-----d~Vlv~~P~y~~y~~~~~~~g~~~~ 152 (380)
T PLN03026 83 YPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV-----LDPG-----DKIIDCPPTFGMYVFDAAVNGAEVI 152 (380)
T ss_pred CCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCChHHHHHHHHHcCCEEE
Confidence 555667889999999885 458999999999999998877 5667 9999999999654433332222111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+.. .|++++++++.. ++++++++++++|++|.+.+ .+++.++++.. ++||+||+|.+|.
T Consensus 153 ~v----~~~~~~~----~d~~~l~~~~~~--~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~ 217 (380)
T PLN03026 153 KV----PRTPDFS----LDVPRIVEAVET--HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFS 217 (380)
T ss_pred Ee----ecCCCCC----cCHHHHHHHHhc--cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhc
Confidence 10 1100100 278899888842 47889999999999999986 66666666544 9999999999775
Q ss_pred ccccCcccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-hcH
Q 017259 176 RSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKL 250 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~ 250 (374)
..+... ......+.+ -||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++.++++.... ++.
T Consensus 218 ~~~~~~--~~~~~~~~viv~~SfSK~~glaGl-RiGy~~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~aL~~~~~~~~~ 292 (380)
T PLN03026 218 TQESRM--KWVKKYDNLIVLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALSNPKYLEDV 292 (380)
T ss_pred CCcchH--HHHHhCCCEEEEecchHhhcCccc-cceeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhhCHHHHHHH
Confidence 433211 111112333 38999999 899 9999999999888876432 3467788888888888753110 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEEecC
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPP 326 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi~~~ 326 (374)
.+.++++++++.+.|+.+ +.....+..++|+|+.++... +..+++++|.++||.++++. .+++||++.
T Consensus 293 ~~~~~~~r~~l~~~L~~~-----~~~~~~p~~~~f~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~ 364 (380)
T PLN03026 293 KNALVEERERLFGLLKEV-----PFLEPYPSDANFILCRVTSGR---DAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG 364 (380)
T ss_pred HHHHHHHHHHHHHHHHHC-----CCCeECCCCCeEEEEECCCCC---CHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC
Confidence 444445555555555443 222223456788888876432 57889999999999998753 579999933
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALHDV 344 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~ 344 (374)
+.+++++++++|+++
T Consensus 365 ---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 365 ---KPEHTDALMEALKQL 379 (380)
T ss_pred ---CHHHHHHHHHHHHHh
Confidence 778889999888754
No 167
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=1.9e-25 Score=211.37 Aligned_cols=298 Identities=15% Similarity=0.133 Sum_probs=193.5
Q ss_pred CCcHHHHHHHHhcccC--------CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 20 NDKFPVFAERLTSMFG--------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~--------~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.....++++.++++++ .+++++|+|+++|+..++.++ ..+| |+|++.+|+|..+...+...+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g 141 (403)
T TIGR01265 72 SVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEAL-----ANPG-----ANILVPRPGFPLYDTRAAFSG 141 (403)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHh-----CCCC-----CEEEEeCCCchhHHHHHHHcC
Confidence 4445566666666553 358999999999999999988 4567 999999999866544333222
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
..... .+...+.. . -.|++++++.+. ++++++++++++|++|.+. +.+.+++|.++|+++|++||+||+|
T Consensus 142 ~~~~~----~~~~~~~~-~-~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y 211 (403)
T TIGR01265 142 LEVRL----YDLLPEKD-W-EIDLDGLEALAD---EKTVAIVVINPSNPCGSVF-SRDHLQKIAEVARKLGIPIIADEIY 211 (403)
T ss_pred CEEEE----ecCCcccC-C-ccCHHHHHHHhC---cCccEEEEecCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccc
Confidence 11111 01100000 0 016888888775 4678888888889999777 7899999999999999999999999
Q ss_pred cCCcccccCc-ccccCCCCCcE---EEeccccc-CCccchhhheeC--HH-----HHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 172 SGLARSGRML-ASDWEEVRPDM---VILGKALG-GGVIPVSAVLAD--KE-----VMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 172 ~~~~~~g~~~-~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
.++.+.+..+ ....+.-...+ -||||.++ +|+ |+||++++ ++ +.+.+... ...+++.+.+++.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~ 289 (403)
T TIGR01265 212 GHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW-RLGWIIIHDPHGIFRDTVLQGLKNL-LQRILGPATIVQGALP 289 (403)
T ss_pred cccccCCCCccchhhhccCCcEEEEeecccccCCCcc-eEEEEEEeCchhhhHHHHHHHHHHH-hhhhcCCChHHHHHHH
Confidence 9876554321 21111111223 38999966 799 99998873 22 33333321 1124566888888888
Q ss_pred HHHHHHhhhcHH----HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC--chhHHHHHHHHH-HCCeE
Q 017259 240 ASLDVIRDEKLA----ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMK-ERGIL 312 (374)
Q Consensus 240 ~al~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~-~~Gi~ 312 (374)
.+++.. .+.+. ++++++++.+.+.|+. ++++....+..|.|+|+.++.... ..+..++++.|+ ++||.
T Consensus 290 ~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~ 364 (403)
T TIGR01265 290 DILENT-PQEFFDGKISVLKSNAELCYEELKD----IPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVI 364 (403)
T ss_pred HHHHhC-hHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEE
Confidence 887641 22333 3344444444444432 222221234468889988864210 014678888864 77999
Q ss_pred eccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 313 AKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 313 v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.|+. .+++||++. ..++.+++++++|+++++
T Consensus 365 v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 365 CLPGSAFGLPNWVRITIT--VPESMLEEACSRIKEFCE 400 (403)
T ss_pred EeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 98863 689999955 568899999999999887
No 168
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4e-26 Score=211.97 Aligned_cols=285 Identities=16% Similarity=0.209 Sum_probs=196.2
Q ss_pred CCCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 17 AFYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.|+.+...++++.+++++|. +++++|+|+++++..+++++. ++| .++|++..|+|..+...+...+...
T Consensus 53 ~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~-----~~g----~~~vli~~P~y~~y~~~~~~~G~~~ 123 (351)
T PRK01688 53 RYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC-----EPG----KDAILYCPPTYGMYSVSAETIGVEI 123 (351)
T ss_pred cCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-----CCC----CCEEEEcCCCHHHHHHHHHHcCCEE
Confidence 36677778999999998864 589999999999999998873 332 2789999999976654443333211
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +...+.. .|++++++++. +++++++++++||+|.+. +.+.+++|.+.|++ +++||+||+|.+|
T Consensus 124 ~~v----~~~~~~~----~d~~~l~~~~~----~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f 189 (351)
T PRK01688 124 RTV----PTLDNWQ----LDLPAIADNLD----GVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEF 189 (351)
T ss_pred EEe----ecCCCCC----CCHHHHHHhcc----CCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhc
Confidence 110 1111111 17888877763 678888989999999888 78888888888876 6889999999987
Q ss_pred cccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh--
Q 017259 175 ARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE-- 248 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~-- 248 (374)
..... ........++++ ||||.+| +|+ |+||+++++++++.+... ...|+.+.+++.++.++++....+
T Consensus 190 ~~~~s--~~~~~~~~~n~iv~rSfSK~~glaGl-RiGy~i~~~~~i~~l~~~--~~~~~v~~~~~~~a~~~L~~~~~~~~ 264 (351)
T PRK01688 190 CPQAS--LAGWLAEYPHLVILRTLSKAFALAGL-RCGFTLANEEVINLLLKV--IAPYPLSTPVADIAAQALSPQGIAAM 264 (351)
T ss_pred CCCCC--hHHHHhhCCCEEEEecchHhhcCHHH-HHhHHhCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhcchHHHH
Confidence 42211 111122234543 8999999 799 999999999998888753 335667778888777777531111
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCEEE
Q 017259 249 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVR 322 (374)
Q Consensus 249 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~lR 322 (374)
+..+.+++.++++.+.|+.+ +++....++.++|+++.++ +..++.+.|+++||.++++. .+++|
T Consensus 265 ~~~~~~~~~~r~~l~~~L~~~----~~~~~~~ps~~nfi~~~~~------~~~~l~~~L~~~gi~vr~~~~~~~~~~~iR 334 (351)
T PRK01688 265 RERVAEINANRQWLIAALKEI----PCVEQVFDSETNYILARFT------ASSAVFKSLWDQGIILRDQNKQPGLSNCLR 334 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEEECCCcCCCCCeEE
Confidence 22334444455555555433 2221223456778887664 36789999999999998642 57999
Q ss_pred EecCCCCCHHHHHHHHHHHH
Q 017259 323 LTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 323 i~~~~~~~~e~i~~~~~~l~ 342 (374)
|+++ +.+++++++++|+
T Consensus 335 is~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 335 ITIG---TREECQRVIDALR 351 (351)
T ss_pred EeCC---CHHHHHHHHHhhC
Confidence 9944 7899999998873
No 169
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=8.3e-26 Score=211.66 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=189.9
Q ss_pred CCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
.++++.+++.+.+.+ ..+++++|+|+++++..++.++.. .++| +.|++..|+|..+...+...+....
T Consensus 63 ~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~---~~~g-----d~vlv~~P~y~~~~~~~~~~g~~v~ 134 (374)
T PRK05839 63 ESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLF---DKQN-----PTIAYPNPFYQIYEGAAIASRAKVL 134 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhc---CCCC-----CEEEECCCCchhhHHHHHhcCCEEE
Confidence 455566777776654 456899999999999888776631 1345 9999999999877666554332211
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+..+ . .|+++ ..+ ++++++++++++||+|.+. +++.+++|.++|++||++||+||+|.++.
T Consensus 135 ~v----~~~~~~~~-~-~d~~~--~~~----~~~k~v~i~nP~NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~ 201 (374)
T PRK05839 135 LM----PLTKENDF-T-PSLNE--KEL----QEVDLVILNSPNNPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIY 201 (374)
T ss_pred Ee----ecccccCC-c-CCcch--hhh----ccccEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcc
Confidence 11 11000000 0 02222 222 2588888888899999888 89999999999999999999999999874
Q ss_pred ccccCcccccC------CCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 176 RSGRMLASDWE------EVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 176 ~~g~~~~~~~~------~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
..+........ ...+.+ .||||.++ +|+ |+||+++++++.+.+........++.+.+.+.++.+++.
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~-- 278 (374)
T PRK05839 202 ENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGL-RSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL-- 278 (374)
T ss_pred cCCCCCCHhhhhcccCccccCcEEEEeccccccCCccc-eeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc--
Confidence 32221111100 011233 38999986 799 999999999888887654333445667777777766553
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHH-CCeEeccCC-------
Q 017259 246 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------- 317 (374)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------- 317 (374)
++++.++.++..++.++.+.+.. +.. .+..|.|+|+.+++ ..++++.|.+ +||.+.|+.
T Consensus 279 -~~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~ 345 (374)
T PRK05839 279 -DDEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVDN------DEEFTKKLYQNEGIKVLPGSFLGRNGI 345 (374)
T ss_pred -cchHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCCC------hHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence 23344443333333333333322 121 34468888887752 4688899875 899998852
Q ss_pred -CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||++. .+++++.+++++|+++++
T Consensus 346 ~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 346 GKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 489999954 578999999999998875
No 170
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=1.9e-25 Score=208.90 Aligned_cols=291 Identities=14% Similarity=0.105 Sum_probs=195.5
Q ss_pred CcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 21 DKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
+...++++.+++++|.+.+++++|+++++..++..+ .++| |+|++..+.|++....+ ...+
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l-----~~~g-----d~Vl~~~~~h~s~~~~~-~~~g-------- 111 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHAL-----CKEG-----DWVVLDGLAHYTSYVAA-ERAG-------- 111 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHh-----hCCC-----CEEEECCcccHHHHHHH-HHcC--------
Confidence 367788888999999999999999999999999888 4566 89999887765443222 2221
Q ss_pred CCCCCCceeccCC-------CHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 101 GPLLPGHLKVDFG-------DITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 101 ~~~~~~~~~~~~~-------d~~~le~~l~~~----~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..+..++++ |++++++++++. .+++++++++++.+++|.+.+ +++|.++|++||+++|+||
T Consensus 112 ----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDe 183 (370)
T TIGR02539 112 ----LNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNC 183 (370)
T ss_pred ----CEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEEC
Confidence 112223322 899999998742 136788999889999999988 9999999999999999999
Q ss_pred cccCCcccccCcccccCCCCCcE--EEecccccCCccchhhheeCHHHHhhcCCCCCCCCC--------CCCHHHHHHHH
Q 017259 170 IQSGLARSGRMLASDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--------GGNPLASAVAI 239 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~--~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~aa~ 239 (374)
+|+.. ..+.. ......|+ .|+||++++|. |+||+++++++++.++.......+ .....++.++.
T Consensus 184 a~~~g-~~~~~----~~~~~~di~v~s~sK~~~~~g-~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (370)
T TIGR02539 184 AYTVG-RMPVS----AKEIGADFIVGSGHKSMAASG-PCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMM 257 (370)
T ss_pred ccccC-CcCCC----HHHcCCCEEEeeCcccccCCC-CEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHH
Confidence 99832 11111 11223454 48899999777 899999999998888754322111 11112455556
Q ss_pred HHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC-----CchhHHHHHHHHHHCCeE-
Q 017259 240 ASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGIL- 312 (374)
Q Consensus 240 ~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gi~- 312 (374)
++++...+. +...+..++.+++++.|++++.. +....++.++++.+.++... .......+.+.|.++||.
T Consensus 258 ~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ 334 (370)
T TIGR02539 258 ASFPHVVERVKRWDEEVKKTRWFVAELEDIGFI---QLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHG 334 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcE---EEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcc
Confidence 666542221 11222233355677777765311 11112345667766654210 001245799999999997
Q ss_pred eccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 313 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 313 v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++++..+++|++.. ..+++++++++++|+++++ ++
T Consensus 335 ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~-~~ 369 (370)
T TIGR02539 335 IRSGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVE-EY 369 (370)
T ss_pred ccCCcceEEEEEec-CCCHHHHHHHHHHHHHHHH-hc
Confidence 77766679999963 5799999999999999887 53
No 171
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=2.5e-25 Score=214.73 Aligned_cols=303 Identities=15% Similarity=0.127 Sum_probs=194.7
Q ss_pred CCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 19 YNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
..++++.+++++.+.. ..++|++|+|+++++..++.++. ..+| |.|+++.|+|.++...+...+...
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~----~~~g-----D~Vlv~~P~y~~y~~~~~~~g~~~ 187 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLI----GDPS-----DGVMIPIPQYPLYSAAITLLGGKQ 187 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc----cCCC-----CEEEECCCCchhHHHHHHHcCCEE
Confidence 3344555555555432 45689999999999999999883 1467 999999999988766655554332
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
... +...+.. .. .|+++|+++++.. ..+++++++++++||+|.+. +++.+++|+++|++||++||+||+|
T Consensus 188 v~v----~~~~~~~-~~-~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~-s~e~~~~i~~~a~~~~~~iI~De~Y 260 (481)
T PTZ00377 188 VPY----YLDEEKG-WS-LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVL-TRDVMEEIIKFCYEKGIVLMADEVY 260 (481)
T ss_pred EEE----EeccccC-CC-CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhh
Confidence 221 1100000 00 1789999988742 13688888878889999887 8999999999999999999999999
Q ss_pred cCCcccc-cCc-ccc-c-CCCC------CcEE---Eecccc-c-CCccchhhhee---CHHHHhhcCCCCCCCCCCCCHH
Q 017259 172 SGLARSG-RML-ASD-W-EEVR------PDMV---ILGKAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPL 233 (374)
Q Consensus 172 ~~~~~~g-~~~-~~~-~-~~~~------~d~~---s~sK~~-~-~G~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
..+.+.+ ..+ ++. . .+.. ..++ ||||.+ + +|+ |+||+++ ++++++.+.... ...++.+.+
T Consensus 261 ~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~-~~~~~~~~~ 338 (481)
T PTZ00377 261 QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGR-RGGYFELTNIPPEVREQIYKLA-SINLCSNVV 338 (481)
T ss_pred HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcC-ceEEEEEeCCCHHHHHHHHHHh-heecCCChH
Confidence 9765432 221 110 0 0111 1233 899986 5 699 9999886 788888886543 234467889
Q ss_pred HHHHHHHHHHHHh--h---hcHHHH-------HHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEec--cCCCc--
Q 017259 234 ASAVAIASLDVIR--D---EKLAER-------SAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFD--KTALP-- 296 (374)
Q Consensus 234 ~~~aa~~al~~~~--~---~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~--~~~~~-- 296 (374)
++.++.++++... + +.+.++ ++++++.+.+.|+. +++ +....+ .|.|+|+.++ .....
T Consensus 339 ~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~----~~g-~~~~~p~gg~fl~~~~~l~~~~~~~~ 413 (481)
T PTZ00377 339 GQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK----IEG-VSCQPVEGAMYAFPRIELPEKAIQEA 413 (481)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCC-cEeecCCeeEEEEeeccCchhhHHHH
Confidence 9999888874210 0 112222 33334444444433 332 222333 4566665543 11000
Q ss_pred -----hhHHHHHHH-HHHCCeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 297 -----VSAYDICLK-MKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 297 -----~~~~~~~~~-l~~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+..+++.. |.++||.+.|+. .+++|+++. .+++++++++++|+++++
T Consensus 414 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 414 KERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHE 474 (481)
T ss_pred HhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 012344444 456799998863 358999954 678899999999999887
No 172
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.9e-25 Score=208.74 Aligned_cols=285 Identities=16% Similarity=0.196 Sum_probs=192.7
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEe-cCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~-~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
|+.+...++++.++++++. +++++ ++|+++++..+++++ .++| |+|++..|+|..+.......+...
T Consensus 66 y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~-----~~~g-----d~vlv~~p~y~~~~~~~~~~g~~~ 135 (361)
T PRK00950 66 YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTF-----IDPG-----DEVIIPTPTFSYYEISAKAHGAKP 135 (361)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCChHHHHHHHHHcCCEE
Confidence 4455668899999998865 57888 677778888887766 4567 999999999866544333222211
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
... +...+. ..|++++++.+. ++++++++++++|++|.+.+ .+++.++|+++|+++|+||+|.++
T Consensus 136 ~~~----~~~~~~----~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~ 200 (361)
T PRK00950 136 VYA----KREEDF----SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEF 200 (361)
T ss_pred EEe----ecCCCC----CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhh
Confidence 110 100110 126888888775 46788888888999999998 888999999999999999999877
Q ss_pred cccccCccc-ccCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHH
Q 017259 175 ARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 252 (374)
Q Consensus 175 ~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~ 252 (374)
. .+..... ...+....+.||||.++ +|+ |+||+++++++.+.++.. ...++.+.+++.++.++++ +.++.+
T Consensus 201 ~-~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~l~---~~~~~~ 273 (361)
T PRK00950 201 A-EYDYTPLALEYDNLIIGRTFSKVFGLAGL-RIGYGFVPEWLIDYYMRA--KTPFSLTRLSQAAAIAALS---DKEYIE 273 (361)
T ss_pred C-ccchHHHHHhcCCEEEEEeehHhhcCchh-hcchhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhc---CHHHHH
Confidence 4 1111111 11111111239999998 799 999999999988877653 2345567888887777765 233444
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEecC
Q 017259 253 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPP 326 (374)
Q Consensus 253 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~~ 326 (374)
+..+..+..++.+.+... + ...++.+.++|+.++.. +..++++.|.++||.++++. .+++|++++
T Consensus 274 ~~~~~~~~~r~~l~~~l~-~----~~~~~~~~~i~~~~~~~----~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~ 344 (361)
T PRK00950 274 KSIEHGIKSREYLYNELP-F----KVYPSEANFVLVDVTPM----TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG 344 (361)
T ss_pred HHHHHHHHHHHHHHhhcC-e----eECCCcceEEEEECCCC----CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC
Confidence 444444444444332221 1 11234567888877432 67899999999999998742 468999944
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+++++++++|+++++
T Consensus 345 ---~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 345 ---TFEENERFLEILKEIVE 361 (361)
T ss_pred ---CHHHHHHHHHHHHHHhC
Confidence 78899999999998763
No 173
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=2.2e-25 Score=213.64 Aligned_cols=305 Identities=17% Similarity=0.082 Sum_probs=195.6
Q ss_pred CCcHHHHHHHHhccc------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMF------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++++.+++.+.+.. ..++|++|+|+++++..++.++ ..+| |.|++..|+|.++........+.
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l-----~~pG-----d~Vlv~~P~Y~~~~~~~~~~~g~ 158 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCL-----AEPG-----DAFLLPTPYYPGFDRDLKWRTGV 158 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHh-----CCCC-----CEEEECCCCCCchHHHHhhcCCc
Confidence 345555666665432 4568999999999999998888 5677 99999999998775544322221
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
..... +...+ .... .|++++++++++ .+.+++++++++++||+|.+. +++.+++|.++|++||++||+||+
T Consensus 159 ~~v~v---~~~~~-~~~~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~-s~e~l~~ll~~a~~~~~~iI~DE~ 232 (468)
T PLN02450 159 EIVPI---HCSSS-NGFQ-ITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTT-TRTELNLLVDFITAKNIHLISDEI 232 (468)
T ss_pred EEEEE---ecCCc-cCCc-CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEEcc
Confidence 11100 10000 0001 167888888764 234788888888899999887 899999999999999999999999
Q ss_pred ccCCcccccCccc--ccC------C--CCCc---EEEeccccc-CCccchhhheeCHH-HHhhcCCCCCCCCCCCCHHHH
Q 017259 171 QSGLARSGRMLAS--DWE------E--VRPD---MVILGKALG-GGVIPVSAVLADKE-VMLCIQPGEHGSTFGGNPLAS 235 (374)
Q Consensus 171 ~~~~~~~g~~~~~--~~~------~--~~~d---~~s~sK~~~-~G~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (374)
|+++.+.+..+.. ... + .... +.||||.++ +|+ |+||++++++ +.+.+... ......+.+++
T Consensus 233 Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~li~~~~~l~~~~~~~--~~~~~~s~~~Q 309 (468)
T PLN02450 233 YSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGF-RVGAIYSNDEMVVSAATKM--SSFGLVSSQTQ 309 (468)
T ss_pred ccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCc-cEEEEEECCHHHHHHHHHH--hhcCCCCHHHH
Confidence 9976444432211 111 0 1122 339999998 899 9999998744 45554432 11223577888
Q ss_pred HHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---chhHHHHHHHHH
Q 017259 236 AVAIASLDVIRD-----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKMK 307 (374)
Q Consensus 236 ~aa~~al~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~ 307 (374)
.++.++++...- ++.+++++++++.+.+.|++. ++.......|.|+|+.++.... -....++.+.|+
T Consensus 310 ~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-----gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll 384 (468)
T PLN02450 310 YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-----GIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIV 384 (468)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHH
Confidence 887777653110 112333334444444444332 2322223356788888753210 012345777776
Q ss_pred H-CCeEeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 308 E-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 308 ~-~Gi~v~~~~------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
+ .||.+.|+. .+++||+++. .+++++++++++|+++++ ...
T Consensus 385 ~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~-~~~ 432 (468)
T PLN02450 385 YEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVE-SDS 432 (468)
T ss_pred HhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHH-hcc
Confidence 5 699998863 5799999443 478999999999999998 554
No 174
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=5.3e-25 Score=192.77 Aligned_cols=320 Identities=15% Similarity=0.135 Sum_probs=211.1
Q ss_pred hHHHHHHHhccc--cC-cCCCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEE
Q 017259 2 KALQEQAEKLTL--SS-RAFYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIV 74 (374)
Q Consensus 2 ~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi 74 (374)
+||.+++..+.. +. +.+....++.+++++-.-. ..+.+++|+|+++|++.++.++ .++| -+|+
T Consensus 85 ~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~L-----A~p~-----aNIL 154 (447)
T KOG0259|consen 85 QAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSL-----ANPG-----ANIL 154 (447)
T ss_pred HHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHh-----cCCC-----Ccee
Confidence 677777765322 22 2344555566666654432 5679999999999999999999 5677 9999
Q ss_pred EeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHH
Q 017259 75 SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAV 154 (374)
Q Consensus 75 ~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l 154 (374)
+++|+|.-+...+.. .+-...+..+-|. .++.. |++.+|..++ ++|.++++.+++||.|+++ |++.|++|
T Consensus 155 lPrPGfp~Y~~~a~~-~~lEVR~ydlLPe-~~weI----DL~~veal~D---ENT~AivviNP~NPcGnVy-s~~HL~ki 224 (447)
T KOG0259|consen 155 LPRPGFPLYDTRAIY-SGLEVRYYDLLPE-KDWEI----DLDGVEALAD---ENTVAIVVINPNNPCGNVY-SEDHLKKI 224 (447)
T ss_pred cCCCCCchHHHhhhh-cCceeEeecccCc-cccee----chHHHHHhhc---cCeeEEEEeCCCCCCcccc-cHHHHHHH
Confidence 999999544333222 2222222222111 12333 8999998887 6899999999999999988 99999999
Q ss_pred HHHHHhcCCEEEEeccccCCcccccCcc-cc-cCCCCCcEE--Eeccc-ccCCccchhhheeCHH--------HHhhcCC
Q 017259 155 RDLCSKYNILMIADEIQSGLARSGRMLA-SD-WEEVRPDMV--ILGKA-LGGGVIPVSAVLADKE--------VMLCIQP 221 (374)
Q Consensus 155 ~~l~~~~~i~li~Dea~~~~~~~g~~~~-~~-~~~~~~d~~--s~sK~-~~~G~~~~G~~~~~~~--------~~~~~~~ 221 (374)
+++|+++++++|.||+|..+.+.+.+|. .. ...+.|-+. ++||. +-+|| |+||++..+. +.+.+..
T Consensus 225 ae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGW-RlGWi~~hD~~gvf~~~~~~q~~~~ 303 (447)
T KOG0259|consen 225 AETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGW-RLGWIALHDPRGVFRDTKVVQGIKN 303 (447)
T ss_pred HHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCc-eeeeEEEecccccccchHHHHHHHH
Confidence 9999999999999999997655555432 22 234555333 67785 55999 9999877542 1112221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeE-EEEeccCC--C
Q 017259 222 GEHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTA--L 295 (374)
Q Consensus 222 ~~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~--~ 295 (374)
....+..++++.|+|.-..|+.-.++ .-..-++.+.+...++|+++ |.......+.|.++ ++.+.-.. .
T Consensus 304 -~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~I----P~l~cp~kPeg~mylmv~l~~s~~~~ 378 (447)
T KOG0259|consen 304 -FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDI----PCLTCPVKPEGCMYLMVKLNLSLFPD 378 (447)
T ss_pred -HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcC----CCcccCcCCCcceEEEeccchhhhcc
Confidence 12334566778888777766654332 22344555566666666554 43332444444433 33331110 0
Q ss_pred chhHHHHHHHHH-HCCeEeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 296 PVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 296 ~~~~~~~~~~l~-~~Gi~v~~~----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
-.+..+|++.|. |+.+++-|+ .++|+|++ .....+.+++++++|++..+ +..
T Consensus 379 ~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~-RH~ 435 (447)
T KOG0259|consen 379 IEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCD-RHS 435 (447)
T ss_pred ccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHHHHHH-hhh
Confidence 114567888886 668999886 38999999 66788999999999999998 654
No 175
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=1.9e-25 Score=208.57 Aligned_cols=285 Identities=15% Similarity=0.119 Sum_probs=193.5
Q ss_pred CCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...+|.+.+++++ ..++|++|+|+++++..++..+ ..+| |+|++.+|+|.++...+...+....
T Consensus 75 Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l-----~~~g-----d~Vli~~P~y~~~~~~~~~~g~~~~ 144 (370)
T PRK09105 75 YDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF-----TSPT-----AGLVTADPTYEAGWRAADAQGAPVA 144 (370)
T ss_pred CCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH-----cCCC-----CEEEEeCCChHHHHHHHHHcCCeEE
Confidence 44445778889999887 4568999999999999999888 4567 9999999999776554443332111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+.. .|++++++. . ++++++++++++||+|.+. +.++++++.+.|+ ++++||+||+|.+|.
T Consensus 145 ~v----~~~~~~~----~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~ 210 (370)
T PRK09105 145 KV----PLRADGA----HDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFS 210 (370)
T ss_pred Ee----cCCCCCC----CCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhc
Confidence 11 1111110 267777654 2 4678888888899999887 7888888888754 599999999998764
Q ss_pred ccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hhcH
Q 017259 176 RSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKL 250 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~ 250 (374)
.. .......+..++++ ||||.++ .|+ |+||+++++++++.+... ..+..+.+++.++.++++... .+..
T Consensus 211 ~~--~s~~~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~ 284 (370)
T PRK09105 211 DA--PSVVDLVAQRKDLIVLRTFSKLYGMAGM-RLGLAAARPDLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQR 284 (370)
T ss_pred cC--cchHHHHhhCCCEEEEecccHhhcCCcc-ceeeeecCHHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHH
Confidence 21 11112222234433 8999998 799 999999999998888754 344567778778777775310 0123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC---CCCEEEEecCC
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPL 327 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~~~~lRi~~~~ 327 (374)
.++++++++++.+.|+.. ++. ..++.+.++++.++. +..++++.|.++||.++.. .++++||++
T Consensus 285 ~~~~~~~r~~l~~~L~~~-----g~~-~~~~~~~f~~~~~~~-----~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~-- 351 (370)
T PRK09105 285 RAENAAVREDTIAWLKKK-----GYK-CTPSQANCFMVDVKR-----PAKAVADAMAKQGVFIGRSWPIWPNWVRVTV-- 351 (370)
T ss_pred HHHHHHHHHHHHHHHHHC-----CCC-cCCCCCcEEEEeCCC-----CHHHHHHHHHHCCcEEecCCCCCCCeEEEEc--
Confidence 344555555555555543 221 123456677665542 5688999999999999432 268999993
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 017259 328 SISSNELQEGSKALHDVLE 346 (374)
Q Consensus 328 ~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++++++++++|+++++
T Consensus 352 -~~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 352 -GSEEEMAAFRSAFAKVMR 369 (370)
T ss_pred -CCHHHHHHHHHHHHHHhh
Confidence 368889999999987764
No 176
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.6e-25 Score=207.05 Aligned_cols=290 Identities=14% Similarity=0.139 Sum_probs=189.5
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++.+.++++++ .+++++|+|+++++..++..+. +| + +++..|+|..+...+...+....
T Consensus 52 y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l~------~g-----~-viv~~P~y~~~~~~~~~~g~~~~ 119 (356)
T PRK08056 52 YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGLK------PR-----R-AMIVTPGFAEYRRALQQVGCEIR 119 (356)
T ss_pred CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC------CC-----C-EEEeCCCcHHHHHHHHHcCCeEE
Confidence 444457788888988874 4689999999999998887651 23 5 67778998665544333322111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+... . .| +++.+.+. ++++++++++++||+|.+. +++.+++|+++|++|+++||+||+|.+|.
T Consensus 120 ~v----~~~~~~~~-~-~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~ 188 (356)
T PRK08056 120 RY----SLREADGW-Q-LT-DAILEALT---PDLDCLFLCTPNNPTGLLP-ERQLLQAIAERCKSLNIALILDEAFIDFI 188 (356)
T ss_pred EE----ecccccCC-C-cc-HHHHHhcc---CCCCEEEEeCCcCCCCCCC-CHHHHHHHHHHHHhcCCEEEEecchhccC
Confidence 11 00000000 0 02 34444443 5788899988999999866 89999999999999999999999999875
Q ss_pred ccccCc-c-cccCCCCCcEEEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hhcH
Q 017259 176 RSGRML-A-SDWEEVRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKL 250 (374)
Q Consensus 176 ~~g~~~-~-~~~~~~~~d~~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~ 250 (374)
..+..+ . ........-+.||||.++ +|+ |+||+++ ++++.+.+... ...++.+.+++.++..+++.-. ....
T Consensus 189 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~ 265 (356)
T PRK08056 189 PDETGFIPQLADNPHLWVLRSLTKFYAIPGL-RLGYLVNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQDRAYQQAT 265 (356)
T ss_pred CcchHHHHHhccCCCEEEEEechhhccCcch-hheeeecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhCCHHHHHHH
Confidence 443211 1 111111111338999999 899 9999987 45676766542 3346667777777776664100 0123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEe
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLT 324 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~ 324 (374)
.+.++++++++.+.|+. +++. ...++.+.|+|+.++. +..++++.|.++||.++++. ++++||+
T Consensus 266 ~~~~~~~r~~l~~~L~~----~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis 335 (356)
T PRK08056 266 WQWLAEEGARFYQALCA----LPLL-TVWPGRANYLFLRCER-----PDIDLQRALLTQRILIRSCANYPGLDSRYYRVA 335 (356)
T ss_pred HHHHHHHHHHHHHHHhc----CCCc-EEcCCCCcEEEEEcCC-----ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE
Confidence 34444555555555543 3222 2234467888887763 35689999999999998753 3699999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHh
Q 017259 325 PPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 325 ~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.++.+.++++|+++++
T Consensus 336 ---~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 336 ---IRSAAENERLLAALRNVLT 354 (356)
T ss_pred ---EcCHHHHHHHHHHHHHHHc
Confidence 4478899999999988765
No 177
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=1.6e-25 Score=208.47 Aligned_cols=285 Identities=18% Similarity=0.210 Sum_probs=195.0
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++++.++++++. +++++++|+++++..++..+ .++| |+|++..|+|..+.......+....
T Consensus 54 y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~-----~~~g-----d~Vli~~p~y~~~~~~~~~~g~~~~ 123 (352)
T PRK03321 54 YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT-----AGPG-----DEVIFAWRSFEAYPILVQVAGATPV 123 (352)
T ss_pred CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh-----cCCC-----CEEEeCCCCHHHHHHHHHHcCCEEE
Confidence 4456788899999998754 47999999998888887766 5667 9999999988543322222211100
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEeccccC
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSG 173 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~--~~i~li~Dea~~~ 173 (374)
..+...+. ..|++++++.++ ++++++++++++|++|.+.+ .++|.++|+. ++++||+||+|.+
T Consensus 124 ----~v~~~~~~----~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~ 188 (352)
T PRK03321 124 ----QVPLTPDH----THDLDAMAAAIT---DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVE 188 (352)
T ss_pred ----EccCCCCC----CCCHHHHHHhhc---cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHH
Confidence 11111110 127888888886 46788888888999999886 5566666655 6999999999997
Q ss_pred CcccccC-cccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 174 LARSGRM-LASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 174 ~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
+.+.+.. .........++++ ||||.++ +|+ |+||+++++++++.+... ...++.+.+++.++.++++.. +
T Consensus 189 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~~--~ 263 (352)
T PRK03321 189 YVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGL-RVGYAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAAE--D 263 (352)
T ss_pred hccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHH-hhhhhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCH--H
Confidence 7544321 1111122234444 8999998 799 999999999999888753 346778899998888877532 2
Q ss_pred cHHHHHHHH---HHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEec
Q 017259 249 KLAERSAHL---GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP 325 (374)
Q Consensus 249 ~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~ 325 (374)
.+.++.+.. .+++.+.|+.. +... .++.|.++|+.++. +..++++.|.++||.+.+.+.+++||+
T Consensus 264 ~~~~~~~~~~~~r~~~~~~L~~~-----~~~~-~~~~g~~i~i~l~~-----~~~~~~~~l~~~gI~v~~~~~~~iRi~- 331 (352)
T PRK03321 264 ELLERVDAVVAERDRVRAALRAA-----GWTV-PPSQANFVWLPLGE-----RTADFAAAAAEAGVVVRPFAGEGVRVT- 331 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-----CCcc-CCCCCCEEEEeCCC-----CHHHHHHHHHHCCEEEEccCCCcEEEe-
Confidence 333333333 33333333332 2211 23457888887743 467899999999999998767789999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 017259 326 PLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 326 ~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.+++++++++|+++++
T Consensus 332 --~~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 332 --IGAPEENDAFLRAARAWRA 350 (352)
T ss_pred --eCCHHHHHHHHHHHHHHhc
Confidence 4688999999999998875
No 178
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=8.6e-25 Score=206.88 Aligned_cols=295 Identities=14% Similarity=0.155 Sum_probs=196.3
Q ss_pred cHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 22 KFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
..+++++.+++++|. +++++|+|++++++.++..+.... .++| |+|++.++.|++............+...
T Consensus 61 ~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~-~~~g-----d~Vl~~~~~~~s~~~~~~~~~~~~g~~v 134 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPR-LQPG-----DEIIVSEAEHHANLIPWLMVAQQTGAKV 134 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhcc-CCCC-----CEEEECCcchhHHHHHHHHHHHHcCcEE
Confidence 456788889988764 479999999999999988773111 3566 9999999998764222211110001110
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
.+.+...+. ..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++|+.. ..
T Consensus 135 ~~v~~~~~~----~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~-~~- 201 (398)
T TIGR03392 135 VKLPIGADL----LPDIRQLPELLT---PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVV-HG- 201 (398)
T ss_pred EEEecCCCC----CcCHHHHHHHhc---cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcC-CC-
Confidence 011110110 026889998886 57899999999999999998 999999999999999999999722 11
Q ss_pred cCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCC------------------C---CCCCHHHH
Q 017259 179 RMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS------------------T---FGGNPLAS 235 (374)
Q Consensus 179 ~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~ 235 (374)
..+.....+|+.++| |.++ .. ++|+++.++++.+.+.+...+. . .+.+..+.
T Consensus 202 ---~~~~~~~~~d~~~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~ 276 (398)
T TIGR03392 202 ---PPDVQALDIDFYAFSGHKLYG-PT-GIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGV 276 (398)
T ss_pred ---CCChhhcCCCEEEEecccccC-CC-ceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHH
Confidence 112223456887777 9665 33 5788989988877775432110 0 13455677
Q ss_pred HHHHHHHHHHhhhc---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE
Q 017259 236 AVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 312 (374)
Q Consensus 236 ~aa~~al~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 312 (374)
.++.++++.+.+.+ ..++.++..+++++.|++ +|++.......+.++.|.++.. +..++.+.|.++||.
T Consensus 277 ~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~----l~g~~~~~~~~~~i~~~~~~~~----~~~~l~~~L~~~gI~ 348 (398)
T TIGR03392 277 IGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ----LPGFRSFRCPGSSLLAFDFAGV----HHSDLAALLAESGIA 348 (398)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCCCcEEEEEeCCc----CHHHHHHHHHhCCEE
Confidence 77778887765543 334444444444444433 3333211112345666666543 567899999999999
Q ss_pred eccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 313 AKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 313 v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++.+. .+++|++++..+|++|++++++.|+++++ .+
T Consensus 349 v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~-~~ 396 (398)
T TIGR03392 349 LRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALE-LL 396 (398)
T ss_pred EecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHH-Hh
Confidence 98653 46899999999999999999999999887 53
No 179
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=1.4e-25 Score=213.33 Aligned_cols=305 Identities=14% Similarity=0.110 Sum_probs=195.2
Q ss_pred CCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEE-eccCCCCcccccccccCCc
Q 017259 20 NDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVS-CCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~-~~~~yhg~~~~~~~~~~~~ 94 (374)
.++++.+++++.+.+ ..++|++|+|+++++..++.++....--.+| |.|++ ..|+|+++...+.......
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~g-----d~v~i~~~P~y~~y~~~~~~~~~~~ 151 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSL-----KKILFPLAPEYIGYADAGLEEDLFV 151 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCC-----CeEEEecCCCchhhHHHhhccCcee
Confidence 345556666665543 4468999999999999999888421000234 88999 7999988765332111000
Q ss_pred cccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 95 EAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.......+. +.....+ .|+++++ +. ++++++++++++||||.+. +.+.+++|.++|++||++||+||+|..
T Consensus 152 ~~~~~~~~~--~~~~~~~~~d~~~l~--~~---~~~~~i~l~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~ 223 (416)
T PRK09440 152 SYRPNIELL--PEGQFKYHVDFEHLH--ID---EDTGAICVSRPTNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGP 223 (416)
T ss_pred ecccccccc--cccccccCCCHHHcc--cC---CCceEEEEecCCCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCccc
Confidence 000001111 0000011 1677776 22 4678888888899999888 899999999999999999999999974
Q ss_pred CcccccCcccccCCCCCc---EEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc-
Q 017259 174 LARSGRMLASDWEEVRPD---MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK- 249 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d---~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~- 249 (374)
+........... ...+. +.||||...+|+ |+||+++++++++.+........++.+.+++.++.++++...-..
T Consensus 224 ~~~~~~~~~~~~-~~~~~vI~~~SfSK~~~pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 301 (416)
T PRK09440 224 PFPGIIFSEATP-LWNPNIILCMSLSKLGLPGV-RCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRL 301 (416)
T ss_pred cCCCcchhhcCc-cccCCeEEEecccccCCCcc-eEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHH
Confidence 311100000000 11223 348999755799 999999999998888765444456678889888888775321111
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEecc-CCCchhHHHHHHHHHHCCeEeccCC------
Q 017259 250 ----LAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDK-TALPVSAYDICLKMKERGILAKPTH------ 317 (374)
Q Consensus 250 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~------ 317 (374)
+.+.++++.+.+++.|++..... + .....+ .|.++|+.++. .. +..++++.|.++||.+.|+.
T Consensus 302 ~~~~~~~~~~~r~~~~~~~L~~~l~~~-~-~~~~~p~gg~fiw~~~~~~~~---~~~~~~~~l~~~gV~v~pg~~F~~~~ 376 (416)
T PRK09440 302 SETVIRPFYRQKVQLAIALLRRYLPDE-P-CLIHKPEGAIFLWLWFKDLPI---TTEELYQRLKARGVLVVPGHYFFPGL 376 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccC-C-eEEecCCCceEEEEECCCCCC---CHHHHHHHHHHCCEEEechHhhCCCC
Confidence 22333444444555554432111 1 122233 47888888865 22 56789999999999998851
Q ss_pred -------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 -------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 -------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++||+++ .+++++++++++|+++++
T Consensus 377 ~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 377 DEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVE 410 (416)
T ss_pred ccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 148999954 478999999999999987
No 180
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=5.7e-25 Score=204.60 Aligned_cols=305 Identities=21% Similarity=0.221 Sum_probs=208.6
Q ss_pred hHHHHHHHhcccc-Cc----CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLS-SR----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~-~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|+++++++..+. ++ .+..+.++++++.|+++++.+..+++++|++++..+++.+ .++| |+|++.
T Consensus 22 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~-----~~~g-----d~Vl~~ 91 (349)
T cd06454 22 EAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTL-----AGKG-----DLIISD 91 (349)
T ss_pred HHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHh-----cCCC-----CEEEEe
Confidence 5777777764332 11 1457888999999999998888888899999999888776 4567 999999
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhc--CCcEEEEEEccccCCCCcccCChhHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAV 154 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~vi~~~~~~~~g~~~~~~~~l~~l 154 (374)
++.|..........+ ..+..++..|.+++++.+++. ++++++++++++++++|...+ +++|
T Consensus 92 ~~~~~~~~~~~~~~g-------------~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i 154 (349)
T cd06454 92 SLNHASIIDGIRLSG-------------AKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPEL 154 (349)
T ss_pred hhhhHHHHHHHHHcC-------------CceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHH
Confidence 888644332221111 122233334788899888854 256788999899999998887 9999
Q ss_pred HHHHHhcCCEEEEecccc-CC-cccccCcc-cccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCC--CCC
Q 017259 155 RDLCSKYNILMIADEIQS-GL-ARSGRMLA-SDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GST 227 (374)
Q Consensus 155 ~~l~~~~~i~li~Dea~~-~~-~~~g~~~~-~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~--~~~ 227 (374)
.++|++||+++|+|++|+ |. ...+.... ........|++ |++|.+++ +.|+++.++++.+.+..... ..+
T Consensus 155 ~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~~~~~~~ 231 (349)
T cd06454 155 VDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYARGFIFS 231 (349)
T ss_pred HHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhchhhhcc
Confidence 999999999999999997 32 11121110 11111234544 78898873 44678888888777654322 122
Q ss_pred CCCCHHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 228 FGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 228 ~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
.+.++..++++.++++.+.. ++..++++++.+++.+.|++.... .. ..+.+.+.++.+++.. +..++.+.|
T Consensus 232 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~--~~~~~~~~~~~~~~~~---~~~~~~~~L 303 (349)
T cd06454 232 TSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFP---VG--GSPSHIIPPLIGDDPA---KAVAFSDAL 303 (349)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCc---cc--CCCCCcEEEEeCCChH---HHHHHHHHH
Confidence 35677778888888887654 456777777888888877665211 11 1112333333333222 578899999
Q ss_pred HHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 307 KERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 307 ~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
.++||.+.+. ..+++|++++...+++++++++++|+++
T Consensus 304 ~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 304 LERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 9999999752 1478999998889999999999999764
No 181
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=4e-25 Score=210.33 Aligned_cols=298 Identities=16% Similarity=0.143 Sum_probs=192.7
Q ss_pred CCcHHHHHHHHhccc------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMF------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++++.+++.+.+.+ ..+++++|+|+++|++.++..+ ..+| |.|++..|.|.++........+.
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l-----~~pG-----D~Vlv~~P~Y~~f~~~~~~~~g~ 167 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFIL-----ADPG-----DALLVPTPYYPGFDRDLRWRTGV 167 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHh-----CCCC-----CEEEEcCCCCcchHHHHHhcCCc
Confidence 445556666666543 3458999999999999988877 5677 99999999998775443321221
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
........ .... .. .|++++++++++ .+.+++++++.+++||+|.+. +++.+++|.++|++||+.||+||+
T Consensus 168 ~vv~v~~~---~~~~-f~-~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~-s~e~l~~l~~~~~~~~i~lI~DEi 241 (447)
T PLN02607 168 KIVPIHCD---SSNN-FQ-VTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATV-QRSVLEDILDFVVRKNIHLVSDEI 241 (447)
T ss_pred EEEEEeCC---CCCC-Cc-CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCCEEEEecc
Confidence 11110000 0000 00 278899888874 235789999988999999877 899999999999999999999999
Q ss_pred ccCCcccccCcc-c-cc---CC-CC-Cc----EEEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCC-CCCHHHHH
Q 017259 171 QSGLARSGRMLA-S-DW---EE-VR-PD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTF-GGNPLASA 236 (374)
Q Consensus 171 ~~~~~~~g~~~~-~-~~---~~-~~-~d----~~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (374)
|.+..+.+..+. . .. .+ .. ++ +.+|||.++ +|+ |+||+++ ++++...++.. ..+ ..+.+++.
T Consensus 242 Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~Gl-RvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~ 317 (447)
T PLN02607 242 YSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGF-RVGTIYSYNDKVVTTARRM---SSFTLVSSQTQH 317 (447)
T ss_pred ccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcc-eEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHH
Confidence 987433332221 1 10 11 01 22 238999998 799 9999887 66776666532 122 34666776
Q ss_pred HHHHHHHHHhhhcHH--------HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---chhHHHHHHH
Q 017259 237 VAIASLDVIRDEKLA--------ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLK 305 (374)
Q Consensus 237 aa~~al~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~ 305 (374)
++...++ +.++. ++++++.+.+.+.|++. ++.......|.|+|++++.... .....++.++
T Consensus 318 ~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-----gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ 389 (447)
T PLN02607 318 LLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRA-----GIECLKGNAGLFCWMNLSPLLETPTREGELALWDS 389 (447)
T ss_pred HHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHH
Confidence 6665554 32222 22233333333333332 2322223458899998864210 0124578878
Q ss_pred HHH-CCeEeccCC------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 306 MKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 306 l~~-~Gi~v~~~~------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++ .||.+.|+. ++|+||+++. .+++++++++++|.++++
T Consensus 390 ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 390 ILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMD 436 (447)
T ss_pred HHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 775 699998863 6899999442 378999999999999987
No 182
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.8e-25 Score=206.17 Aligned_cols=286 Identities=17% Similarity=0.141 Sum_probs=192.9
Q ss_pred CCCCcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 18 FYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
|+.+...++++.++++++. +++++|+|+++++..++.++ ..+| |+|++.+|+|.++...+...+...
T Consensus 60 Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~-----~~~g-----d~vlv~~P~y~~~~~~~~~~g~~~ 129 (356)
T PRK04870 60 YPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALAC-----AKPG-----ATVLAPEPGFVMYRMSAKLAGLEF 129 (356)
T ss_pred CCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEECCCCHHHHHHHHHHcCCEE
Confidence 4445567888889988764 37999999999999988877 5667 999999999977654443333221
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. .+...+. ..|++++++++.. .+++++++++++||+|.+. +.+.+++|+++| ++++|+||+|.+|
T Consensus 130 ~~----i~~~~~~----~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~ 195 (356)
T PRK04870 130 VG----VPLTADF----TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPF 195 (356)
T ss_pred EE----ecCCCCC----CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhh
Confidence 11 1111110 1278999988864 3678888888899999888 677777777777 7899999999877
Q ss_pred cccccCcccccCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-hcHHH
Q 017259 175 ARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAE 252 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~ 252 (374)
............+...-+.|||| ++ +|+ |+||+++++++++.+.... ..++.+.+++.++..+++.... ++..+
T Consensus 196 ~~~~~~~~~~~~~~vi~~~S~SK-~~~~Gl-RiG~~i~~~~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~ 271 (356)
T PRK04870 196 AGDSWLPRLARFPNLLVMRTVSK-LGLAGL-RLGYLAGHPAWIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAA 271 (356)
T ss_pred cCcchHHHHhhCCCEEEEecchh-hhhHHH-hhhhhhCCHHHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHH
Confidence 43211101111111112338999 66 699 9999999999888887532 3456778888877777653211 12344
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEecC
Q 017259 253 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPP 326 (374)
Q Consensus 253 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~~ 326 (374)
+++++++++.+.|+. ++++ ...+..+.++|+.++ +..++.+.|.++||.++++. .+++||++
T Consensus 272 ~~~~~~~~l~~~L~~----~~~~-~~~~~~~~~~~~~~~------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~- 339 (356)
T PRK04870 272 QLRAERTRLAAALAA----LPGV-TVFPSAANFILVRVP------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTV- 339 (356)
T ss_pred HHHHHHHHHHHHHHh----CCCc-EECCCCCeEEEEECC------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeC-
Confidence 455555555555543 3332 223455778888765 24678999999999998752 57999993
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALHDVL 345 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~ 345 (374)
.+.+++++++++|++++
T Consensus 340 --~~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 340 --GTPEENAQFLAALKAAL 356 (356)
T ss_pred --CCHHHHHHHHHHHHHhC
Confidence 37889999999998753
No 183
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.8e-25 Score=205.63 Aligned_cols=293 Identities=14% Similarity=0.152 Sum_probs=195.4
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++++.++++++. +++++|+|+++++..++.++. .+| +++|++.+|+|..+...+...+....
T Consensus 56 Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~-----~~g----~~~vlv~~p~y~~~~~~~~~~g~~~~ 126 (364)
T PRK04781 56 YPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC-----VPG----RDAVLVTPPVFGMYAVCARLQNAPLV 126 (364)
T ss_pred CCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc-----CCC----CCeEEEcCCChHHHHHHHHHcCCEEE
Confidence 5555577899999998754 589999999999999998773 333 26899999987544333222221111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
. .+...+..... .|++++.+.+.. ++++++++++++||+|.+. +.+.+++|.+.|+ ++++||+||+|.+|.
T Consensus 127 ~----v~~~~~~~~~~-~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~ 197 (364)
T PRK04781 127 E----VPLVDGADGFH-ADVPAIVAAALA--SNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFS 197 (364)
T ss_pred E----EecCCCccCCC-cCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhc
Confidence 0 01100000000 156776554432 4688888888999999888 6777788877775 489999999999875
Q ss_pred ccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---
Q 017259 176 RSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE--- 248 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~--- 248 (374)
..... ....+..++++ ||||.++ +|+ |+||+++++++++.+... ...++.+.+++.++..+++....+
T Consensus 198 ~~~~~--~~~~~~~~~vi~~~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~ 272 (364)
T PRK04781 198 DVPSA--VGLLARYDNLAVLRTLSKAHALAAA-RIGSLIANAELIAVLRRC--QAPYPVPTPCAALAEQALSAPALAVTA 272 (364)
T ss_pred CCcch--HHHHhhCCCEEEEecChhhcccccc-eeeeeeCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHhcccHHHHH
Confidence 32111 11122234443 8999999 899 999999999999888754 235677888888877777532111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCEEEE
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRL 323 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~lRi 323 (374)
+..+.++++++++.+.|+. ++++....++.|+|+|+.++ +..++.+.|.++||.++++. .+++||
T Consensus 273 ~~~~~~~~~r~~l~~~L~~----~~~~~~~~p~~g~f~~~~~~------~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ri 342 (364)
T PRK04781 273 RRVAEVRAERERLHAALAQ----LPGVRRVYPSQGNFLLVRFD------DAEAAFQALLAAGVVVRDQRAAPRLSDALRI 342 (364)
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEE
Confidence 2233344445555555543 33332234566899998775 35689999999999998863 579999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHh
Q 017259 324 TPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+ ..++++.++++++|+++..
T Consensus 343 s---~~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 343 T---LGTPEQNDRVLAALQRTQA 362 (364)
T ss_pred e---CCCHHHHHHHHHHHHHHHh
Confidence 9 4478899999999987653
No 184
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=3.7e-25 Score=209.82 Aligned_cols=283 Identities=13% Similarity=0.090 Sum_probs=179.4
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC
Q 017259 35 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 114 (374)
Q Consensus 35 ~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 114 (374)
..+++++|+|+++++...+. + ..+| |+|++.+|+|.++...+...+...... ... ...++..++.+.
T Consensus 98 ~~~~I~it~Ga~~al~~l~~-~-----~~~g-----d~V~v~~P~Y~~~~~~~~~~g~~~~~~-~~~-~~~~~~~v~~~~ 164 (409)
T PRK07590 98 SADEIFISDGAKCDTGNILD-I-----FGPD-----NTIAVTDPVYPVYVDTNVMAGRTGEAN-EDG-RYSGIVYLPCTA 164 (409)
T ss_pred ChhhEEECCCHHHHHHHHHH-h-----cCCC-----CEEEEeCCCCcchHHHHHHcCCccccc-ccc-cccceeEeeccc
Confidence 45689999999999887432 2 3467 999999999988766555444321000 000 000122222210
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC-cccccC-CCCCc-
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE-EVRPD- 191 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~-~~~~~~-~~~~d- 191 (374)
-+.+..-+.+ ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.++.+.+.. ...... +....
T Consensus 165 ~~~~~~d~~~--~~~k~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v 241 (409)
T PRK07590 165 ENNFVPELPE--EKVDIIYLCFPNNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECA 241 (409)
T ss_pred ccCCcccCcc--cCceEEEEeCCCCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccce
Confidence 0001000111 4688888888889999877 8999999999999999999999999987544321 111111 11112
Q ss_pred --EEEeccccc-CCccchhhheeCHHHHhhcCC-----------CCCCCCC-CCCHHHHHHHHHHHHHHhh---hcHHHH
Q 017259 192 --MVILGKALG-GGVIPVSAVLADKEVMLCIQP-----------GEHGSTF-GGNPLASAVAIASLDVIRD---EKLAER 253 (374)
Q Consensus 192 --~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~aa~~al~~~~~---~~~~~~ 253 (374)
+-||||.++ +|+ |+||+++++++++.+.. ......+ +.+.+++.++.++++.-.. +++.+.
T Consensus 242 i~~~SfSK~~~~pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~ 320 (409)
T PRK07590 242 IEFRSFSKTAGFTGT-RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDY 320 (409)
T ss_pred EEEecCccccCCcCc-eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 338999998 899 99999999888763210 0112222 4677888887776642111 123445
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHH-CCeEeccCC------CCEEEEecC
Q 017259 254 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPP 326 (374)
Q Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~lRi~~~ 326 (374)
++++++++.+.|+.. ++.......+.++|+.+++.. +..++++.|++ .||.+.|+. .+++||+
T Consensus 321 ~~~~r~~l~~~L~~~-----~~~~~~~~g~~f~wi~~~~~~---~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~-- 390 (409)
T PRK07590 321 YMENAKIIREGLESA-----GFEVYGGVNAPYIWVKTPDGM---SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS-- 390 (409)
T ss_pred HHHHHHHHHHHHHhc-----CCceecCCcceEEEEECCCCC---CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--
Confidence 555555555555543 221111235778898887643 56788888875 699998862 4799999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALHDV 344 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~ 344 (374)
+..+++++++++++|+++
T Consensus 391 ~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 391 AFGSRENVLEAMERIKKA 408 (409)
T ss_pred ccCCHHHHHHHHHHHHhh
Confidence 456889999999999875
No 185
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.4e-25 Score=205.61 Aligned_cols=289 Identities=20% Similarity=0.184 Sum_probs=193.1
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.....++++.++++++. +++++|+|+++++..++.++ .++| |+|++..|+|......+...+....
T Consensus 68 Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~-----~~~g-----d~vli~~P~y~~~~~~~~~~g~~~~ 137 (371)
T PRK05166 68 YPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAV-----LRPG-----DRVVTLYPSFPLHEDYPTMMGARVE 137 (371)
T ss_pred CCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCChHHHHHHHHHcCCeEE
Confidence 3344445788888887754 58999999999999888877 5667 9999999999765443332221111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
. .+...+. .-|++++++.++ ++++++++.+++|++|.+. +.+.+++|+++|++ +++||+||+|.++.
T Consensus 138 ~----v~~~~~~----~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~ 204 (371)
T PRK05166 138 R----VTVTPDL----GFDLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYA 204 (371)
T ss_pred E----eecCCCC----CCCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhc
Confidence 0 0110100 016888988886 3567888888899999888 78888888888864 89999999999775
Q ss_pred ccccCcc-cccC-CCCCcE---EEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-h
Q 017259 176 RSGRMLA-SDWE-EVRPDM---VILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-D 247 (374)
Q Consensus 176 ~~g~~~~-~~~~-~~~~d~---~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~ 247 (374)
..+.... .... ...+++ .||||.++ +|+ |+||++. ++++.+.+... ...++.+.+++.++.+++..-. -
T Consensus 205 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~i~~~~~l~~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~ 281 (371)
T PRK05166 205 AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYGLVSDPELVGLLDRV--RTPFNVNGAAQAAALAALDDEEHL 281 (371)
T ss_pred CCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeeeecCCHHHHHHHHHh--ccCCCCCHHHHHHHHHHhcCHHHH
Confidence 3222111 1111 122233 38999999 899 9999765 67777777542 2345678888877777765210 0
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEE
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRL 323 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi 323 (374)
++..+.++++++++.+.|+.. ++. ..++.|.|+|+.++. +..++++.|.++||.+.++. .+++||
T Consensus 282 ~~~~~~~~~~r~~l~~~L~~~-----g~~-~~p~~g~fl~~~~~~-----~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi 350 (371)
T PRK05166 282 AKGVALALAERERLKKELAEM-----GYR-IAPSRANFLFFDARR-----PASAVAEALLRQGVIVKPWKQPGFETFIRV 350 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----cCe-eCCCcCCEEEEeCCC-----CHHHHHHHHHHCCeEEecCCCCCCCCeEEE
Confidence 123344444555555555543 222 134457888877543 46789999999999998863 689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHh
Q 017259 324 TPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++ .+.++.+++.++|+.++.
T Consensus 351 ~~---~~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 351 SI---GSPEENDHFVAALDKVLE 370 (371)
T ss_pred Ec---CCHHHHHHHHHHHHHHhh
Confidence 93 367778888888887653
No 186
>PLN02721 threonine aldolase
Probab=99.94 E-value=1.9e-24 Score=201.36 Aligned_cols=302 Identities=15% Similarity=0.133 Sum_probs=191.0
Q ss_pred CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHccccc-ccCCCCccEEEEeccCCCCcccc--cccccCC
Q 017259 17 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVK-KKFSIDEAIIVSCCGCFHGRTLA--AISMSCD 93 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~-~G~~~~~~~vi~~~~~yhg~~~~--~~~~~~~ 93 (374)
.++++...++++.++++++.+.+++++||++++..++.++ .. +| |+|++.+++|...... .....+
T Consensus 36 ~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~-----~~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~g- 104 (353)
T PLN02721 36 LGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVH-----CDVRG-----SEVILGDNSHIHLYENGGISTLGG- 104 (353)
T ss_pred cCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHH-----ccCCC-----CeEEEcCccceehhcccchhhhcC-
Confidence 3557778899999999999998999999999988887776 33 67 9999999987433221 111111
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
....+.+...+. ..|+++++++++++. +++++++++++++++|+...+.+.+++|.++|++||++||+||
T Consensus 105 --~~~~~v~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~ 178 (353)
T PLN02721 105 --VHPRTVKNNEDG----TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG 178 (353)
T ss_pred --ceeEecCCCcCC----CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc
Confidence 100001110000 027999999987421 4788999988766655555589999999999999999999999
Q ss_pred cccCCcccc-cCcccccCCCCCc--EEEecccccCCccchhh-heeCHHHHhhcCCCCCCCCCCCCHH--HHHHHHHHHH
Q 017259 170 IQSGLARSG-RMLASDWEEVRPD--MVILGKALGGGVIPVSA-VLADKEVMLCIQPGEHGSTFGGNPL--ASAVAIASLD 243 (374)
Q Consensus 170 a~~~~~~~g-~~~~~~~~~~~~d--~~s~sK~~~~G~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~aa~~al~ 243 (374)
+|. ++... ............| +.++||++++ ++|+ ++.++++++.+...........+.. ..+++..+++
T Consensus 179 a~~-~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (353)
T PLN02721 179 ARI-FNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ 254 (353)
T ss_pred hhh-hcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH
Confidence 986 21100 0001111111233 4478899873 3454 5677887776543211111111112 2223333343
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCcee-eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEE
Q 017259 244 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVR 322 (374)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lR 322 (374)
... +..++..++.+++.+.|+++ +++.. ...+.+.++++.++.. .+.+..+++++|.++||.+++...+++|
T Consensus 255 ~~~--~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~v~~~~~~~lR 327 (353)
T PLN02721 255 ENV--PKLEDDHKKAKLLAEGLNQI----KGLRVNVAAVETNIVYFDITDG-SRITAEKLCKSLEEHGVLLMPGNSSRIR 327 (353)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHhC----CCcEEecCCccceEEEEEccCC-ccccHHHHHHHHHhCCcEEecCCCceEE
Confidence 221 12333345556666666554 22211 1233456788777642 0015788999999999999999889999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHh
Q 017259 323 LTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 323 i~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++++..+++|+++++++|++++.
T Consensus 328 ~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 328 VVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred EEecCcCCHHHHHHHHHHHHHHhh
Confidence 999888999999999999998876
No 187
>PLN02231 alanine transaminase
Probab=99.94 E-value=9.4e-25 Score=211.24 Aligned_cols=304 Identities=11% Similarity=0.073 Sum_probs=193.8
Q ss_pred CCCCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..++++.+++++.+.. ..++|++|+|+++|+..+++++. ..+| |.|+++.|+|..+.......+..
T Consensus 169 G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~----~~~g-----d~Vli~~P~Y~~y~~~~~~~g~~ 239 (534)
T PLN02231 169 GIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI----RSEK-----DGILCPIPQYPLYSASIALHGGT 239 (534)
T ss_pred CcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhc----cCCC-----CEEEEeCCCChhHHHHHHHcCCE
Confidence 33444555666665543 35789999999999999999884 2356 99999999998876655544433
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.... ++..+.. . -.|+++|++++++.. .+++++++.+++||||.+. +++.+++|.++|++||++||+||+
T Consensus 240 ~v~~----~l~~~~~-~-~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl-s~e~l~~Iv~~a~~~~l~lI~DEv 312 (534)
T PLN02231 240 LVPY----YLDEATG-W-GLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL-AEENQRDIVEFCKQEGLVLLADEV 312 (534)
T ss_pred EEEE----ecCcccC-C-CCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEEcc
Confidence 2111 1111000 0 027899999887521 2688888888899999877 899999999999999999999999
Q ss_pred ccCCccc-ccCc-ccccC----CC---CCcEE---Eeccccc--CCccchhhhee---CHHHHhhcCCCCCCCCCCCCHH
Q 017259 171 QSGLARS-GRML-ASDWE----EV---RPDMV---ILGKALG--GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPL 233 (374)
Q Consensus 171 ~~~~~~~-g~~~-~~~~~----~~---~~d~~---s~sK~~~--~G~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (374)
|.++.+. +..+ .+... +. ...++ ||||.+. .|+ |+||+++ ++++.+.+..... .+.+.+.+
T Consensus 313 Y~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGl-RiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~ 390 (534)
T PLN02231 313 YQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFTSDVREQIYKVAS-VNLCSNIS 390 (534)
T ss_pred chhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCcc-ceEEEEEecCCHHHHHHHHHHHh-hhcCCChH
Confidence 9987553 2222 21110 11 12233 8899874 599 9999875 6778777754322 34455677
Q ss_pred HHHHHHHHHHH-------Hh-----hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEE-eeeEEEEe--ccCCC---
Q 017259 234 ASAVAIASLDV-------IR-----DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVEF--DKTAL--- 295 (374)
Q Consensus 234 ~~~aa~~al~~-------~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-g~~~~~~~--~~~~~--- 295 (374)
++.++..+++. .. .+++.+.++++.+.+.+.|+++ ++ +....+. +.|+|..+ +....
T Consensus 391 ~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~----~g-i~~~~p~Ggfylw~~l~lp~~~~~~~ 465 (534)
T PLN02231 391 GQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL----EG-VTCNKAEGAMYLFPRIHLPQKAIKAA 465 (534)
T ss_pred HHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CC-ceecCCCeeeEEeccccCcHHHHHHH
Confidence 77777666631 10 0122344555555555555433 22 2233344 44445233 22100
Q ss_pred ----chhHHHHHHHHH-HCCeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 296 ----PVSAYDICLKMK-ERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 ----~~~~~~~~~~l~-~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
......++..|+ +.||.+.|+. ..++|++ +..+++++++++++|+++++
T Consensus 466 ~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit--~~~~~e~l~eal~RL~~~~~ 526 (534)
T PLN02231 466 EAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT--ILPQEDKIPAIVSRLTEFHK 526 (534)
T ss_pred hhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE--eCCCHHHHHHHHHHHHHHHH
Confidence 001234567676 5699999863 2469999 45788999999999998887
No 188
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.6e-25 Score=210.65 Aligned_cols=310 Identities=13% Similarity=0.138 Sum_probs=189.4
Q ss_pred cCCCCCcHHHHHHHHhc-c-cC------CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc
Q 017259 16 RAFYNDKFPVFAERLTS-M-FG------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA 87 (374)
Q Consensus 16 ~~~~~~~~~~l~~~l~~-~-~~------~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~ 87 (374)
+.+..++++.+++++.+ . .+ .+++++|+|+++|+..++.++......++| |+|++.+|+|..+...+
T Consensus 133 ~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pG-----D~Vlv~~P~y~~Y~~~~ 207 (527)
T PRK09275 133 PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAG-----DKIALMTPIFTPYLEIP 207 (527)
T ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCC-----CEEEEeCCChHHHHHHH
Confidence 33445556666654432 1 11 238999999999999999875332336788 99999999998775544
Q ss_pred ccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEE
Q 017259 88 ISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILM 165 (374)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~--~~i~l 165 (374)
........... . +...+.. .. .|+++++++++ ++++++++++++||+|.+. +++.+++|+++|++ +|++|
T Consensus 208 ~l~g~~~~~v~-v-~~~~~~~-f~-~d~~~l~~~~~---~~tkai~l~nP~NPTG~v~-s~e~l~~I~~ia~~~~~~l~I 279 (527)
T PRK09275 208 ELPRYDLEVVH-I-NADEENE-WQ-YPDSELEKLRD---PSIKALFLVNPSNPPSVAM-SDESLEKIADIVNEKRPDLMI 279 (527)
T ss_pred HHcCCCeEEEE-e-ecCcccC-CC-CCHHHHHhhcC---CCCCEEEEeCCcCCcCCCC-CHHHHHHHHHHHHhcCCCcEE
Confidence 33322111110 0 0000000 00 26788888765 6899999989999999877 89999999999964 59999
Q ss_pred EEeccccCCcccccCcccccC-CCCCcEEEeccccc-CCccchhhheeCHH-----HHhhc-------------------
Q 017259 166 IADEIQSGLARSGRMLASDWE-EVRPDMVILGKALG-GGVIPVSAVLADKE-----VMLCI------------------- 219 (374)
Q Consensus 166 i~Dea~~~~~~~g~~~~~~~~-~~~~d~~s~sK~~~-~G~~~~G~~~~~~~-----~~~~~------------------- 219 (374)
|+||+|..|...... ..... .....+.||||.++ +|| |+||++++++ +++.+
T Consensus 280 I~DEvY~~f~~~~~s-~~~~~~~~~I~v~SfSK~f~mtG~-RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p 357 (527)
T PRK09275 280 ITDDVYGTFVDDFRS-LFAVLPYNTILVYSFSKYFGATGW-RLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDP 357 (527)
T ss_pred EECCCChhhcccccC-HHHhCCCCEEEEeehhhhccCcHh-HHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCc
Confidence 999999977431111 11111 11112339999998 799 9999998875 43333
Q ss_pred -------------CCCCCCCCCCCCHHHHHH-H----HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE
Q 017259 220 -------------QPGEHGSTFGGNPLASAV-A----IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 281 (374)
Q Consensus 220 -------------~~~~~~~~~~~~~~~~~a-a----~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (374)
+.....++.+.+.+.|.+ + .++++. .+++.+..++..++.++.+-+.... +.....+.
T Consensus 358 ~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~--~~~~~~~~~~~~~~Rr~~l~~~Lg~--~~~~~~p~ 433 (527)
T PRK09275 358 EKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE--EDAYKKAMKDIIRRRYKALYEGLGL--PEPEDPNN 433 (527)
T ss_pred chhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC--chHHHHHHHHHHHHHHHHHHHHcCC--CCcCCCCC
Confidence 122344566777777775 3 222321 1233333333333333333222111 12111233
Q ss_pred EeeeEEEEeccCCC-------------chhHHHHHHHHHHC-CeEeccCC-----CCEEEEecCCC-CCHHHHHHHHHHH
Q 017259 282 RGLFNAVEFDKTAL-------------PVSAYDICLKMKER-GILAKPTH-----DTIVRLTPPLS-ISSNELQEGSKAL 341 (374)
Q Consensus 282 ~g~~~~~~~~~~~~-------------~~~~~~~~~~l~~~-Gi~v~~~~-----~~~lRi~~~~~-~~~e~i~~~~~~l 341 (374)
.+.|++++++.... ..+..+++.+|+++ ||++.|+. .+++||+ ++ .+++++.++.++|
T Consensus 434 g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl 511 (527)
T PRK09275 434 AAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAI 511 (527)
T ss_pred eeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHH
Confidence 45666666643110 11467788888755 99998863 4689999 45 5789999999999
Q ss_pred HHHHh
Q 017259 342 HDVLE 346 (374)
Q Consensus 342 ~~~~~ 346 (374)
+++++
T Consensus 512 ~~~l~ 516 (527)
T PRK09275 512 RKLLD 516 (527)
T ss_pred HHHHH
Confidence 99987
No 189
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=6.3e-25 Score=202.70 Aligned_cols=275 Identities=17% Similarity=0.168 Sum_probs=189.3
Q ss_pred CCCCcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 18 FYNDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
|+.+. .+|.+.+++++|. +++++|+|+++++..... + ..+| + |++..|+|.++...+...+.
T Consensus 51 Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~-----~~~g-----~-v~v~~P~y~~y~~~~~~~g~-- 115 (339)
T PRK06959 51 LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-L-----LPRG-----R-VGIAPLAYSEYAPAFARHGH-- 115 (339)
T ss_pred CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-h-----cCCC-----e-EEEcCCCcHHHHHHHHHCCC--
Confidence 55544 7899999998855 589999999999875543 2 2334 5 88899999877655544332
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.+..++.++ + .+. +.++.+++.+++||||.+. +++.+++|++.|+++++++|+||+|.+|
T Consensus 116 -----------~~~~v~~~~-~----~~~---~~~~~v~l~nPnNPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 -----------RVVPLDEAA-D----TLP---AALTHLIVVNPNNPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred -----------EEEeecccc-h----hcc---ccCCEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 122223222 2 222 2345666767789999887 7888999999999999999999999987
Q ss_pred cccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-hc
Q 017259 175 ARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EK 249 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~ 249 (374)
... .. ...... .++++ ||||.++ +|+ |+||+++++++++.+... ...++.+.+++.++.++++...- +.
T Consensus 176 ~~~-~s-~~~~~~-~~~vi~l~SfSK~~gl~Gl-RiGy~v~~~~li~~l~~~--~~~~~vs~~~q~a~~~~L~~~~~~~~ 249 (339)
T PRK06959 176 LPA-AS-LAAHTD-RPGLVVLRSVGKFFGLAGV-RAGFVLAAPALLAALRDA--LGAWTVSGPARHAVRAAFADAAWQAA 249 (339)
T ss_pred CCc-cc-chhccC-CCCEEEEecChhhcCCcch-heEEEecCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCcHHHHHH
Confidence 422 11 111111 23333 9999999 899 999999999999888754 23566788898888888753111 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-CCEEEEecCCC
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLS 328 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~lRi~~~~~ 328 (374)
..+.++++++++.+.|++++ +. ..+.+.++|+.++ +..++.+.|.++||.++... .+++||+ ..
T Consensus 250 ~~~~~~~~r~~l~~~L~~~g-----~~--~~~~~~f~~~~~~------~~~~l~~~l~~~GI~vr~~~~~~~lRis--i~ 314 (339)
T PRK06959 250 MRERLAADGARLAALLRAHG-----FA--VHATPLFSWTDDP------RAAALHAALARRGIWTRYFAPPPSVRFG--LP 314 (339)
T ss_pred HHHHHHHHHHHHHHHHHHCC-----CC--ccCcceEEEEeCC------CHHHHHHHHHhCCeEEEECCCCCeEEEE--CC
Confidence 34555555555555555442 21 1124567777654 35789999999999998753 5799999 33
Q ss_pred CCHHHHHHHHHHHHHHHhccC
Q 017259 329 ISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 329 ~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.+++++++++|+++++ .+
T Consensus 315 ~~~~e~~~l~~al~~~~~-~~ 334 (339)
T PRK06959 315 ADEAEWQRLEDALAECVP-TL 334 (339)
T ss_pred CCHHHHHHHHHHHHHHHH-HH
Confidence 578899999999998887 54
No 190
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.2e-25 Score=209.80 Aligned_cols=299 Identities=13% Similarity=0.119 Sum_probs=191.3
Q ss_pred CCCCcHHHHHHHHhccc----CCCeEE--ecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMVL--PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~~--~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
+..++++.+++++.... ..++++ .|.|+++|+..++.++... ..+| |+|++.+|+|+++...+...+
T Consensus 73 G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~--~~~G-----d~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 73 GLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRF--LPAG-----TTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHh--cCCC-----CEEEEcCCCchhHHHHHHHcC
Confidence 33444555555554332 345777 4899999999888755432 5678 999999999998877666554
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
...... ++..+.. . -.|++.++++++++.++++++++++++||||.+. +++.+++|.++|++||++||+||+|
T Consensus 146 ~~~~~v----~l~~~~~-~-~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y 218 (404)
T PTZ00376 146 LNVKEY----RYYDPKT-K-GLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAY 218 (404)
T ss_pred Cceeec----cccCccc-C-CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhh
Confidence 332211 1100000 0 0178899998876444567888888999999888 8999999999999999999999999
Q ss_pred cCCccccc---Ccccc-cCCCCCc---EEEeccccc-CCccchhhh---eeCHHHHhhcCCC---CCCCCC-CCCHHHHH
Q 017259 172 SGLARSGR---MLASD-WEEVRPD---MVILGKALG-GGVIPVSAV---LADKEVMLCIQPG---EHGSTF-GGNPLASA 236 (374)
Q Consensus 172 ~~~~~~g~---~~~~~-~~~~~~d---~~s~sK~~~-~G~~~~G~~---~~~~~~~~~~~~~---~~~~~~-~~~~~~~~ 236 (374)
.++.+.+. ..... .....++ +.||||.++ +|+ |+||+ .+++++.+.+... ....++ +.+.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~ 297 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGAR 297 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHH
Confidence 98754321 10111 1111122 349999999 899 99997 4677654443211 012233 44677888
Q ss_pred HHHHHHHHHhh-h-------cHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 237 VAIASLDVIRD-E-------KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 237 aa~~al~~~~~-~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
++..+++.-.. + +..++++++++.+.+.|++.. .+..... .+..|.|+|+.+ ..+++++|.
T Consensus 298 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--~~~~~~~~~p~gg~f~~~~~--------~~~~~~~L~ 367 (404)
T PTZ00376 298 IADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALG--SPGDWEHIINQIGMFSFTGL--------TKEQVERLI 367 (404)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCcccccccCceEEEecCC--------CHHHHHHHH
Confidence 88777753210 1 223445556666666665542 1101111 223355566543 257888888
Q ss_pred HC-CeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 308 ER-GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 308 ~~-Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++ ||.+.|++ ||+++. .+.++++.++++|++++.
T Consensus 368 ~~~~v~v~p~~----Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 368 EKYHIYLLDNG----RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HhCCEeecCCC----eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 77 99998873 999532 789999999999998875
No 191
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.1e-25 Score=205.21 Aligned_cols=284 Identities=16% Similarity=0.205 Sum_probs=188.8
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++.+.++++++ .+++++|+|+++++..+++++ ..+| |+|++.+|+|..+.......+....
T Consensus 57 y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l-----~~~g-----d~vlv~~P~y~~~~~~~~~~g~~~~ 126 (353)
T PRK05387 57 YPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAF-----FNHD-----RPLLFPDITYSFYPVYAGLYGIPYE 126 (353)
T ss_pred CCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEEeCCCHHHHHHHHHHcCCEEE
Confidence 444556788888888874 568999999999999999988 5667 9999999998555433332221111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
. .+...+.. -|++++++ .++++++.+++||+|.+.+ .+.+++|++.+ +++++|+||+|.+|+
T Consensus 127 -~---v~~~~~~~----~d~~~l~~-------~~~~v~~~~P~NPtG~~~~-~~~~~~l~~~~--~~~~livDe~y~~~~ 188 (353)
T PRK05387 127 -E---IPLDDDFS----IDVEDYLR-------PNGGIIFPNPNAPTGIALP-LAEIERILAAN--PDSVVVIDEAYVDFG 188 (353)
T ss_pred -E---eecCCCCC----CCHHHHHh-------cCCEEEEeCCCCCCCCCCC-HHHHHHHHHhC--CCcEEEEeCcccccC
Confidence 0 01101100 15666642 3456777778999999885 55555554433 299999999998774
Q ss_pred ccccCcccccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCC-CCCCCCHHHHHHHHHHHHHHh-hhc
Q 017259 176 RSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHG-STFGGNPLASAVAIASLDVIR-DEK 249 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~-~~~ 249 (374)
. .. .....+..++ +.||||.++ +|+ |+||+++++++.+.+...... .+++.+.+++.++.++++..+ .++
T Consensus 189 ~--~~-~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 264 (353)
T PRK05387 189 G--ES-AIPLIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEE 264 (353)
T ss_pred C--cc-hHHHHhhCCCEEEEEehhHhhcchhh-hceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHH
Confidence 2 11 1111111222 238999998 899 999999999988887654332 356778888888877775211 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEEec
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTP 325 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi~~ 325 (374)
..++++++++++.+.|++. ++. ..++.+.++|+.++.. +..+++++|.++||.+++.. .+++|+++
T Consensus 265 ~~~~~~~~~~~l~~~L~~~-----g~~-~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~ 334 (353)
T PRK05387 265 TRAKVIATRERLVEELEAL-----GFE-VLPSKANFVFARHPSH----DAAELAAKLRERGIIVRHFNKPRIDQFLRITI 334 (353)
T ss_pred HHHHHHHHHHHHHHHHHHC-----CCe-ECCCcCcEEEEECCCC----CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe
Confidence 4455555666666666543 221 1234567777776643 57899999999999996542 47999994
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 017259 326 PLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 326 ~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+ +.+++++++++|++++.
T Consensus 335 ~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 335 G---TDEEMEALVDALKEILA 352 (353)
T ss_pred C---CHHHHHHHHHHHHHHhh
Confidence 4 67999999999998875
No 192
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=204.63 Aligned_cols=293 Identities=15% Similarity=0.169 Sum_probs=195.0
Q ss_pred CCcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 20 NDKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.....++.+.+++++ ..+++++|+|+++++..++..+ ..+| |.|++.+|+|.++.......+
T Consensus 72 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-----~~~g-----d~Vli~~p~~~~~~~~~~~~g 141 (394)
T PRK06836 72 NAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAI-----LNPG-----DEVIVFAPYFVEYRFYVDNHG 141 (394)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEcCCCCccHHHHHHHcC
Confidence 344445555555543 4578999999999999999887 4567 999999999987654433322
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCCEE
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILM 165 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~------~~i~l 165 (374)
...... +...+ .. -.|+++++++++ ++++++++++++|++|.+. +.+.+++|.++|++ ||++|
T Consensus 142 ~~v~~v----~~~~~--~~-~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~i 210 (394)
T PRK06836 142 GKLVVV----PTDTD--TF-QPDLDALEAAIT---PKTKAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYL 210 (394)
T ss_pred CEEEEE----ecCCc--cC-cCCHHHHHhhcC---cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEE
Confidence 111111 11010 00 027889988886 4788899888899999888 79999999999999 89999
Q ss_pred EEeccccCCcccccCcc--cccCCCCCcEEEeccccc-CCccchhhheeCHHHHhh------cCCCCC-CCCCCCCHHHH
Q 017259 166 IADEIQSGLARSGRMLA--SDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLC------IQPGEH-GSTFGGNPLAS 235 (374)
Q Consensus 166 i~Dea~~~~~~~g~~~~--~~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~ 235 (374)
|+||+|.++.+.+.... ....+...-+.||||.++ +|+ |+||+++++++.+. +..... ......+.+.+
T Consensus 211 i~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 289 (394)
T PRK06836 211 ISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGE-RIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQ 289 (394)
T ss_pred EEeccccccccCCCCCCChHHccCcEEEEecchhhccCcce-eeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHH
Confidence 99999998754432211 111111111338999998 899 99999998765322 111111 11234566777
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 236 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 236 ~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
.++...++. ....+.++++.+.+.+.|+.. +.....+..|.++|+.++.. +..++++.|.++||.+.+
T Consensus 290 ~~~~~~l~~---~~~~~~~~~~r~~l~~~L~~~-----g~~~~~~~gg~~~~~~~~~~----~~~~~~~~l~~~gv~v~~ 357 (394)
T PRK06836 290 RVVAKCLDA---TVDVSIYKRNRDLLYDGLTEL-----GFECVKPQGAFYLFPKSPEE----DDVAFCEKAKKHNLLLVP 357 (394)
T ss_pred HHHHHHhCC---hHHHHHHHHHHHHHHHHHHhC-----CCEeecCCceEEEEEeCCCC----CHHHHHHHHHhCCEEEEC
Confidence 766655542 222345555566666655543 22222233467777767653 577889999999999998
Q ss_pred CC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 316 TH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 316 ~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+. .+++||++. .+++++++++++|+++++ ..
T Consensus 358 g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~-~~ 392 (394)
T PRK06836 358 GSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAK-EY 392 (394)
T ss_pred chhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHH-Hh
Confidence 73 589999965 589999999999999987 53
No 193
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=3.2e-25 Score=206.05 Aligned_cols=283 Identities=19% Similarity=0.205 Sum_probs=190.0
Q ss_pred CCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 19 YNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
+.+...++++.++++++ .+++++++|+++++..+++.+ ..+| |+|++++|+|..+.......+....
T Consensus 52 ~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l-----~~~g-----d~v~~~~p~y~~~~~~~~~~g~~~~- 120 (346)
T TIGR01141 52 PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF-----LEPG-----DAVLVPPPTYSMYEISAKIHGAEVV- 120 (346)
T ss_pred CCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCCHHHHHHHHHHcCCeEE-
Confidence 34455789999999876 468999999999998888877 4566 9999999998543322222221110
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 176 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~ 176 (374)
..+...+. ..|++++++.+. ++++++++++++|++|.+.+ .+.+.++++.|+ +|+++|+||+|+++..
T Consensus 121 ---~~~~~~~~----~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~ 188 (346)
T TIGR01141 121 ---KVPLDEDG----QLDLEDILVAID---DKPKLVFLCSPNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSG 188 (346)
T ss_pred ---EeccCCCC----CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcC
Confidence 11111110 137888888764 57888999888999998885 444445554444 5999999999997643
Q ss_pred cccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hhcHH
Q 017259 177 SGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLA 251 (374)
Q Consensus 177 ~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~ 251 (374)
.+.... .....++++ |+||.++ +|+ |+||++.++++.+.++.. ..+++.+++++.++.++++... -....
T Consensus 189 ~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 263 (346)
T TIGR01141 189 EPSTLP--LLAEYPNLIVLRTLSKAFGLAGL-RIGYAIANAEIIDALNKV--RAPFNLSRLAQAAAIAALRDDDFIEKTV 263 (346)
T ss_pred CccHHH--HHhhCCCEEEEehhhHhhhchhh-hceeeecCHHHHHHHHhc--cCCCCCCHHHHHHHHHHhCCHHHHHHHH
Confidence 222111 111123433 8899996 688 999999999988888753 2346678888888877775432 11334
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCEEEEecC
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPP 326 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~lRi~~~ 326 (374)
++++++.+++++.|+.. +++. ..++.+.++|+.++. +..++.++|.++||.+.++. .+++|++++
T Consensus 264 ~~~~~~~~~l~~~L~~~----~g~~-~~~~~g~~~~~~~~~-----~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~ 333 (346)
T TIGR01141 264 EEINAERERLYDGLKKL----PGLE-VYPSDANFVLIRFPR-----DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG 333 (346)
T ss_pred HHHHHHHHHHHHHHHhc----CCCE-ECCCcCCEEEEecCC-----CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC
Confidence 44555555555555433 2222 223357888887764 36789999999999998864 589999944
Q ss_pred CCCCHHHHHHHHHHHH
Q 017259 327 LSISSNELQEGSKALH 342 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~ 342 (374)
++++++++++.|+
T Consensus 334 ---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 334 ---TREENDRFLAALR 346 (346)
T ss_pred ---CHHHHHHHHHHhC
Confidence 7899999998763
No 194
>PRK08637 hypothetical protein; Provisional
Probab=99.94 E-value=1.4e-24 Score=204.48 Aligned_cols=303 Identities=11% Similarity=0.097 Sum_probs=193.3
Q ss_pred CCcHHHHHHHHhccc---C---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMF---G---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~---~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++++.+++++.+.. . .+++++|+|+++++..++.++ .++| |+|++.+|+|..+........+.
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-----~~~g-----d~Vlv~~P~y~~~~~~~~~~~g~ 116 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF-----VDQG-----DTVLLPDHNWGNYKLTFNTRRGA 116 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh-----cCCC-----CEEEEcCCCCccHHHHHHHhcCC
Confidence 334445555554432 1 146899999999999999888 5667 99999999997776543222221
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHh-cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-----cCCEEEE
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-----YNILMIA 167 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~-----~~i~li~ 167 (374)
... ..++..+-.. -|+++++++++. ..+.++++++++++||||.+. +++.+++|+++|++ ||++||+
T Consensus 117 ~vv---~v~~~~~~~~---~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~-s~~~~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 117 EIV---TYPIFDEDGG---FDTDALKEALQAAYNKGKVIVILNFPNNPTGYTP-TEKEATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred EEE---EecccCCCCc---CCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 111 1111000000 178999888862 223455677777899999777 89999999999886 9999999
Q ss_pred eccccCCcccccCc-c-c-ccCCCCCc--EE---Eeccccc-CCccchhhheeC------HHHHhhcCCC----CCCCCC
Q 017259 168 DEIQSGLARSGRML-A-S-DWEEVRPD--MV---ILGKALG-GGVIPVSAVLAD------KEVMLCIQPG----EHGSTF 228 (374)
Q Consensus 168 Dea~~~~~~~g~~~-~-~-~~~~~~~d--~~---s~sK~~~-~G~~~~G~~~~~------~~~~~~~~~~----~~~~~~ 228 (374)
||+|.++.+.+... . . ...+...+ ++ |+||.++ +|+ |+||++.+ +++.+.+... .....+
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGl-RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 268 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGF-RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS 268 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCccc-ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC
Confidence 99999875544321 1 1 11122223 22 7899866 799 99998743 5666666421 112234
Q ss_pred CCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH---HHHHhC--CCceee-EEEEeeeEEEEeccCCCchhHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF---KIQQQF--PNYVKE-VRGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~--~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
+.+.+++.++.++++ +..+.+++++....++++.. +..... ++.... .+..|.++|+.++.. +..++
T Consensus 269 ~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~----~~~~l 341 (388)
T PRK08637 269 NGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGV----DAEEL 341 (388)
T ss_pred CCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChH----HHHHH
Confidence 678888888887775 23344444443333333322 222111 111122 234577888777632 57889
Q ss_pred HHHHH-HCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 303 CLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 303 ~~~l~-~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+++|+ ++||.+.+...+++||+++. .+.+++++++++|+++++ ++
T Consensus 342 ~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~-~~ 387 (388)
T PRK08637 342 RVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAIK-DL 387 (388)
T ss_pred HHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHHH-hc
Confidence 99996 56998877667899999664 578999999999999988 65
No 195
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=5.2e-25 Score=208.36 Aligned_cols=300 Identities=10% Similarity=0.030 Sum_probs=186.6
Q ss_pred CCCcHHHHHHHHhcc-----cCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 19 YNDKFPVFAERLTSM-----FGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~-----~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+.....++.+.++++ ...+++++|+|+++++...+ .+ ..+| |+|++..|+|.++...+...+..
T Consensus 73 p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~-~l-----~~~g-----d~Vlv~~P~y~~~~~~~~~~g~~ 141 (402)
T TIGR03542 73 PEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQ-SL-----FGSD-----NTVAVQDPVYPAYVDSNVMAGRA 141 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHH-Hh-----cCCC-----CEEEEeCCCCcchHHHHHHcCCc
Confidence 344555666666653 25679999999999998753 33 3456 89999999998876655544331
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
..... - -.+..+..++.+.-+.+...+.+. ++++++++++++||+|.+. +.+.+++|.++|++||++||+||+|.+
T Consensus 142 ~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~y~~ 217 (402)
T TIGR03542 142 GVLDD-D-GRYSKITYLPCTKENNFIPDLPEE-PKIDIIYLCSPNNPTGTVL-TKEQLKELVDYANEHGSLILFDAAYSA 217 (402)
T ss_pred ccccc-c-cccceEEEeecchhhCCCCCcccc-CCceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEEchhhh
Confidence 11000 0 000122222321100110001111 3678888888899999877 899999999999999999999999998
Q ss_pred Cccccc-Ccccc-cCCCCCc---EEEeccccc-CCccchhhheeCHHHH--------hhcCCCCCCCCCCCCHHHHHHHH
Q 017259 174 LARSGR-MLASD-WEEVRPD---MVILGKALG-GGVIPVSAVLADKEVM--------LCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 174 ~~~~g~-~~~~~-~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
|...+. ..... ..+.... +-||||.++ +|+ |+||++++++++ ..+.........+.+.+++.++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~ 296 (402)
T TIGR03542 218 FISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV-RLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAE 296 (402)
T ss_pred hccCCCCCcchhhCCCCcccEEEEecCccccCCCCc-ceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHH
Confidence 754332 11111 1111112 338999997 899 999999998775 22211111122246778887776
Q ss_pred HHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEecc
Q 017259 240 ASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKP 315 (374)
Q Consensus 240 ~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~ 315 (374)
.++..... .+..+.++++.+.+.+.|+.. +........+.++|+.++... +..++++.|+ +.||.+.+
T Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~f~~v~l~~~~---~~~~l~~~l~~~~gv~v~p 368 (402)
T TIGR03542 297 AAYAGEGLQPILEAISYYMENARILRKALEAA-----GFKVYGGEHAPYLWVKTPEGI---SSWDFFDFLLYQYHVVGTP 368 (402)
T ss_pred HHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-----CceecCCCceeEEEEECCCCC---CHHHHHHHHHHhCCEEEeC
Confidence 66642111 122344445555555555443 221111225778999887643 5678999988 46999988
Q ss_pred CC------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 316 TH------DTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 316 ~~------~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
+. ++++||+ +..+++++++++++|+++
T Consensus 369 g~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 369 GSGFGPSGEGFVRFS--AFGKRENIVEACERIKEA 401 (402)
T ss_pred chhhCCCCCCEEEEE--ecCCHHHHHHHHHHHHhh
Confidence 62 5799999 445889999999999875
No 196
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=1.4e-24 Score=200.03 Aligned_cols=280 Identities=11% Similarity=0.016 Sum_probs=187.9
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec---cCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC---GCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~---~~yhg~~~~~~~~~~ 92 (374)
++.+.+++|+++|++++|. +++++++||++|+..++.++ .++| |+|++.. |+|......+ .+.+
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al-----~~~g-----d~Vli~~~d~p~~~s~~~~~-~l~g 119 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILAL-----EPPG-----RKVVHYLPEKPAHPSIPRSC-KLAG 119 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHh-----CCCC-----CEEEECCCCCCCchhHHHHH-HHcC
Confidence 4578899999999999988 89999999999999999988 5667 8888753 4543322222 2221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
...+.++++++++. . ++++++++++ .+++|.+. +++.+++|+++|++||++||+||+|+
T Consensus 120 --------------a~~~~~~~l~~l~~----~-~~~~lIiitg-~s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~ 178 (346)
T TIGR03576 120 --------------AEYFESDELSELKK----I-DGTSLVVITG-STMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASG 178 (346)
T ss_pred --------------CEEeccCCHHHHhh----C-cCceEEEEEC-CCCCCccc-CHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 11122345655432 1 3577777765 46778776 57889999999999999999999998
Q ss_pred CCc--ccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcH
Q 017259 173 GLA--RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 250 (374)
Q Consensus 173 ~~~--~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~ 250 (374)
.+. ..+.... ...+.+.-+.||||++ +|+ ++||+++++++++.+........++.+++.++++.++|+....+..
T Consensus 179 ~~~~~~~~~~~~-~~~~~divv~s~SKal-aG~-r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~ 255 (346)
T TIGR03576 179 ARVRRLYGQPPA-LDLGADLVVTSTDKLM-DGP-RGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRI 255 (346)
T ss_pred ccccccCCCCCH-HHcCCcEEEeccchhc-ccc-ceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHH
Confidence 431 1222211 1122222234889965 356 8999999999999888765555666788899999999976543445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-----CCEEEEec
Q 017259 251 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTP 325 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~lRi~~ 325 (374)
.+.++++.+.+.+.++. + .+. +...+|+++.++... +.+.+.+.|.++||.++|+. ++++||++
T Consensus 256 ~~~l~~r~~~~~~~l~~----~-~~~---~~~~~f~~~~~~~~~---~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~ 324 (346)
T TIGR03576 256 RDAFKRKEEVYLRLFDK----L-NVE---RTPTGFVIKGVEEEK---LIEIGLDLLRNYGIITITAVGMPGASKTLRFDL 324 (346)
T ss_pred HHHHHHHHHHHHHHHHh----C-CCC---cCCCeEEEEeCCCCC---HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEE
Confidence 56666666666665553 2 121 123347777665321 23445555667899999853 57999993
Q ss_pred CCCCCHH---HHHHHHHHHHHHH
Q 017259 326 PLSISSN---ELQEGSKALHDVL 345 (374)
Q Consensus 326 ~~~~~~e---~i~~~~~~l~~~~ 345 (374)
...++ ++++++++|++.+
T Consensus 325 --~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 325 --AAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred --ecChHHhcCHHHHHHHHHhcc
Confidence 33443 7999999988654
No 197
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=8.7e-25 Score=201.37 Aligned_cols=274 Identities=18% Similarity=0.228 Sum_probs=187.6
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+++...++++.++++++. +++++|+|+++++..+..++ .+ .+|++.+|+|+.+.......+
T Consensus 44 y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l------~~------g~vl~~~p~y~~~~~~~~~~g---- 107 (330)
T TIGR01140 44 YPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL------AP------GRVLVLAPTYSEYARAWRAAG---- 107 (330)
T ss_pred CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh------CC------CeEEEeCCCcHHHHHHHHHcC----
Confidence 4455568899999998864 68999999999988865543 12 358889999977654433221
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
...++++|++++++.++ ++++++++.++|++|.+. +.+.+++|+++|++||++||+||+|.++.
T Consensus 108 -----------~~~~~~~d~~~l~~~~~----~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~ 171 (330)
T TIGR01140 108 -----------HEVVELPDLDRLPAALE----ELDVLVLCNPNNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFT 171 (330)
T ss_pred -----------CEEEEeCCHHHHHhhcc----cCCEEEEeCCCCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccC
Confidence 22222338898888774 355677777788899877 89999999999999999999999998775
Q ss_pred ccccCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHH
Q 017259 176 RSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 251 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~ 251 (374)
..... ....+..++++ ||||.++ +|+ |+||+++++++++.+.... ..+..+.+++.++...++ +.++.
T Consensus 172 ~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~ 243 (330)
T TIGR01140 172 PDASL--APQAARFPGLVVLRSLTKFFGLAGL-RLGFVVAHPALLARLREAL--GPWTVNGPARAAGRAALA---DTAWQ 243 (330)
T ss_pred Cccch--hhHhccCCCEEEEEecchhhcCchh-hhhheeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHh---chHHH
Confidence 33111 11111122333 9999999 799 9999999999888887542 345667788777776665 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEec
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTP 325 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~ 325 (374)
++.+++.+..++.+.+....++ .+...++.+.|+|+.++ +..+++++|.++||.+.++. .+++||++
T Consensus 244 ~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~f~~~~~~------~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~ 316 (330)
T TIGR01140 244 AATRARLAAERARLAALLARLG-GLEVVGGTALFLLVRTP------DAAALHEALARRGILIRDFDNFPGLDPRYLRFAL 316 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CceECCCCCeEEEEEcC------CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe
Confidence 4444444444454444444432 22223446788887765 35689999999999998852 37999994
Q ss_pred CCCCCHHHHHHHHHHH
Q 017259 326 PLSISSNELQEGSKAL 341 (374)
Q Consensus 326 ~~~~~~e~i~~~~~~l 341 (374)
+ ...++ ++++.+|
T Consensus 317 ~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 317 P--TDEEN-DRLEEAL 329 (330)
T ss_pred c--CHHHH-HHHHHhh
Confidence 3 33344 7777665
No 198
>PRK08354 putative aminotransferase; Provisional
Probab=99.94 E-value=2.5e-24 Score=196.70 Aligned_cols=265 Identities=15% Similarity=0.124 Sum_probs=179.2
Q ss_pred cHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCC
Q 017259 22 KFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFG 101 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 101 (374)
....+.++++++++ +++++|+|+++++..++.++ .+| |+|++..|+|.++...+...+.+.
T Consensus 41 ~~~~l~~~ia~~~~-~~I~vt~G~~~al~~~~~~~------~~g-----d~vlv~~P~y~~~~~~~~~~g~~~------- 101 (311)
T PRK08354 41 YYEWLEEEFSKLFG-EPIVITAGITEALYLIGILA------LRD-----RKVIIPRHTYGEYERVARFFAARI------- 101 (311)
T ss_pred ChHHHHHHHHHHHC-CCEEECCCHHHHHHHHHHhh------CCC-----CeEEEeCCCcHHHHHHHHHcCCEE-------
Confidence 35778999999887 57999999999998776433 357 999999999988766655444221
Q ss_pred CCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCc
Q 017259 102 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 181 (374)
Q Consensus 102 ~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~ 181 (374)
..++ .|++.+++.++ +++++++++++||+|.+. +.+.+++|.++|++||+++|+||+|.+|...+...
T Consensus 102 ------~~~~-~d~~~l~~~~~----~~~~vi~~~P~NPTG~~~-~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~ 169 (311)
T PRK08354 102 ------IKGP-NDPEKLEELVE----RNSVVFFCNPNNPDGKFY-NFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP 169 (311)
T ss_pred ------eecC-CCHHHHHHhhc----CCCEEEEecCCCCCCCcc-CHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc
Confidence 1112 27888887775 344566666688999877 89999999999999999999999999875433211
Q ss_pred ccccCCCCCcEEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q 017259 182 ASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE 260 (374)
Q Consensus 182 ~~~~~~~~~d~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~ 260 (374)
. .....-+-||||.++ +|+ |+||+++. .+.++... ..+..+..+++++.+.++ +. .+++++..+.
T Consensus 170 --~-~~~vi~~~S~SK~~~l~Gl-RiG~~v~~---~~~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~ 235 (311)
T PRK08354 170 --E-GENIIKLRTFTKSYGLPGI-RVGYVKGF---EEAFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPL 235 (311)
T ss_pred --C-CCcEEEEeccHhhcCCccc-eeeeeeeh---HHHHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHH
Confidence 1 111112338999999 899 99998883 33443321 234455555555544433 11 2344444555
Q ss_pred HHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEEecCCCCCHHHHHH
Q 017259 261 LRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQE 336 (374)
Q Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi~~~~~~~~e~i~~ 336 (374)
+++..+.+...+. .++.+.++++.++ +..++++.|.++||.++++. ++++||+ ....++.++
T Consensus 236 ~~~~~~~l~~~l~-----~~~~~~~~~~~~~------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~ 301 (311)
T PRK08354 236 IWREKERFEKALY-----VKSDANFFIKDVG------DAEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREENEK 301 (311)
T ss_pred HHHHHHHHHHhcC-----CCCCCcEEEEECC------CHHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHHHHH
Confidence 5554444332221 2345667766543 45789999999999999874 4899999 446677888
Q ss_pred HHHHHHHHH
Q 017259 337 GSKALHDVL 345 (374)
Q Consensus 337 ~~~~l~~~~ 345 (374)
++++|++++
T Consensus 302 l~~al~~~~ 310 (311)
T PRK08354 302 LIRALREWR 310 (311)
T ss_pred HHHHHHHhh
Confidence 888887653
No 199
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=4.2e-24 Score=202.37 Aligned_cols=284 Identities=13% Similarity=0.067 Sum_probs=183.8
Q ss_pred CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCC
Q 017259 35 GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD 114 (374)
Q Consensus 35 ~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 114 (374)
..+++++++|+++++..++..+ .++| |+|++.+|+|..+...+...+...... +...+.. . ..|
T Consensus 94 ~~~~i~~t~G~~~~l~~~~~~~-----~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~v~~----~~~~~~~-~-~~d 157 (404)
T PRK09265 94 DVDDIYIGNGVSELIVMAMQAL-----LNNG-----DEVLVPAPDYPLWTAAVSLSGGKPVHY----LCDEEAG-W-FPD 157 (404)
T ss_pred CcccEEEeCChHHHHHHHHHHh-----CCCC-----CEEEEeCCCCcChHHHHHHcCCEEEEE----ecccccC-C-CCC
Confidence 3468999999999999998877 5667 999999999976655444333221111 0000000 0 026
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC-cccccCCCCCcE-
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDM- 192 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~-~~~~~~~~~~d~- 192 (374)
++++++.++ ++++++++++++|++|.+. +.+.+++|.++|++||++||+||+|.++.+.+.. .......-...+
T Consensus 158 ~~~l~~~~~---~~~~~v~l~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 233 (404)
T PRK09265 158 LDDIRSKIT---PRTKAIVIINPNNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCV 233 (404)
T ss_pred HHHHHHhcc---ccceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEE
Confidence 888888775 4688888888889999877 7999999999999999999999999987544422 111111111122
Q ss_pred --EEeccccc-CCccchhhhee--CHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-hcHH---HHHHHHHH
Q 017259 193 --VILGKALG-GGVIPVSAVLA--DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLA---ERSAHLGE 259 (374)
Q Consensus 193 --~s~sK~~~-~G~~~~G~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~---~~~~~~~~ 259 (374)
-||||.++ +|+ |+||+++ ++. +.+.+... ....++.+.+++.++.+++...+. ..+. ++++++++
T Consensus 234 ~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~ 311 (404)
T PRK09265 234 TFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRD 311 (404)
T ss_pred EEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Confidence 37899996 799 9999885 333 33333211 123456788888888887742111 1122 23334444
Q ss_pred HHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC--chhHHHHHHHHHHCCeEeccCC------CCEEEEecCCCCCH
Q 017259 260 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISS 331 (374)
Q Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~~~~~~~ 331 (374)
.+.+.|+. ++++....+..|.++|+.++.... ..+...+.+.|.++||.+.|+. ++++|+++ ..++
T Consensus 312 ~~~~~L~~----~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~ 385 (404)
T PRK09265 312 RAWELLNA----IPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRV 385 (404)
T ss_pred HHHHHHhc----CCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCH
Confidence 44444433 322222223457788887764210 0134557778889999998752 57999995 4688
Q ss_pred HHHHHHHHHHHHHHh
Q 017259 332 NELQEGSKALHDVLE 346 (374)
Q Consensus 332 e~i~~~~~~l~~~~~ 346 (374)
+++++++++|+++++
T Consensus 386 e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 386 DDLEEAIGRIGRFLS 400 (404)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999887
No 200
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.1e-25 Score=203.73 Aligned_cols=271 Identities=14% Similarity=0.132 Sum_probs=183.6
Q ss_pred CCCCcHHHHHHHHhcccC-----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 18 FYNDKFPVFAERLTSMFG-----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~-----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
|+.+...+|.+.++++++ .+++++|+|+++++..++..+ ++|++.+|+|.++...+...+.
T Consensus 53 Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~--------------d~v~v~~P~y~~~~~~~~~~g~ 118 (335)
T PRK14808 53 YYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--------------DRSVFFPPTYSCYRIFAKAVGA 118 (335)
T ss_pred CCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh--------------CcEEECCCCHHHHHHHHHHcCC
Confidence 444556777777777765 678999999999999998876 7799999999887776665543
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
+.... |...+ + .++.. .+ .+++++++.+++||+|.+. +++.+++ ++ +++++||+||+|.
T Consensus 119 ~~~~v----~~~~~-----~-~~~~~--~~----~~~~~i~i~nP~NPTG~~~-s~~~l~~---l~-~~~~~ii~DE~Y~ 177 (335)
T PRK14808 119 KFLEV----PLTKD-----L-RIPEV--NV----GEGDVVFIPNPNNPTGHVF-EREEIER---IL-KTGAFVALDEAYY 177 (335)
T ss_pred eEEEe----cCCCc-----C-CCChh--Hc----cCCCEEEEeCCCCCCCCCc-CHHHHHH---HH-hcCCEEEEECchh
Confidence 22111 11110 0 11111 12 2467888888999999988 5555544 44 5899999999999
Q ss_pred CCcccccCcccccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh-
Q 017259 173 GLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD- 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~- 247 (374)
+|. +..+. ......+. +.||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++.++++....
T Consensus 178 ~f~--~~~~~-~~~~~~~~vi~~~S~SK~~~l~Gl-RvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~~~~ 251 (335)
T PRK14808 178 EFH--GESYV-DLLKKYENLAVIRTFSKAFSLAAQ-RIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIF 251 (335)
T ss_pred hhc--CCchH-HHHHhCCCEEEEEechhhccCccc-ceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCHHHH
Confidence 873 21111 11111123 338999999 899 9999999999988886533 3467788888888777763211
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCC
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPL 327 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~ 327 (374)
.+..+.++++++++.+.|+.. +. ...++.|.|+|+.++.. +..++.++|.++||.++.. .+++||+
T Consensus 252 ~~~~~~~~~~r~~l~~~L~~~-----g~-~~~~~~g~f~~~~l~~~----~~~~~~~~l~~~Gi~V~~~-~~~~Ris--- 317 (335)
T PRK14808 252 EERTKFIVEERERMKSALREM-----GY-RITDSRGNFVFIFMEKE----EKERLLEHLRAKNIAVRSF-REGVRIT--- 317 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCCeEEEEeCCCc----cHHHHHHHHHHCCeEEEEC-CCCeEEe---
Confidence 122333444444444444433 22 22345788999888743 4578999999999999976 5789999
Q ss_pred CCCHHHHHHHHHHHHH
Q 017259 328 SISSNELQEGSKALHD 343 (374)
Q Consensus 328 ~~~~e~i~~~~~~l~~ 343 (374)
..+.++.++++++|++
T Consensus 318 i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 318 IGKREENDMILKELEV 333 (335)
T ss_pred cCCHHHHHHHHHHHHh
Confidence 5678999999998864
No 201
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=6e-25 Score=205.55 Aligned_cols=286 Identities=22% Similarity=0.274 Sum_probs=196.7
Q ss_pred CCcHHHHHHHHhcccC--------CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccc
Q 017259 20 NDKFPVFAERLTSMFG--------YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM 90 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~--------~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~ 90 (374)
.....++++.++++++ .+ ++++++|..+++..++.++. ..+| ++|++..|+|.+....+...
T Consensus 43 ~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~----~~~~-----~~vlv~~P~y~~~~~~~~~~ 113 (363)
T PF00155_consen 43 PQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLK----INPG-----DTVLVPDPCYPSYIEAARLL 113 (363)
T ss_dssp TTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHH----SSTT-----SEEEEEESSSTHHHHHHHHT
T ss_pred chhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccc----cccc-----ccceecCCcccccccccccc
Confidence 3447888899988776 66 78888777777776666663 3456 99999999997766555544
Q ss_pred cCCccccccCCCCCCCceecc-------CCCHHHHHHHHHhcC-C--cEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 91 SCDNEAIRGFGPLLPGHLKVD-------FGDITALEKIFKESG-D--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~~~-~--~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
+.. +..++ ..|+++|++.+++.+ + +++++++++++||+|... +.+.+++|+++|++
T Consensus 114 g~~-------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 114 GAE-------------VIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELARE 179 (363)
T ss_dssp TSE-------------EEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHH
T ss_pred Cce-------------eeeccccccccccccccccccccccccccccccceeeeccccccccccc-ccccccchhhhhcc
Confidence 322 12222 128999999999631 2 468888988999999877 89999999999999
Q ss_pred cCCEEEEeccccCCcccccCc-c-cccCCCCCc---EEEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHH
Q 017259 161 YNILMIADEIQSGLARSGRML-A-SDWEEVRPD---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLA 234 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~-~-~~~~~~~~d---~~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
||++||+||+|.++......+ . .......++ +.|+||.++ .|+ |+||+++++++.+.++.... .+..+.+.
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~--~~~~~~~~ 256 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQR--SGLSSSPM 256 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHH--HTTSSHHH
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeecccccccccc-ccccccchhhhhhhhhhccc--cccccchh
Confidence 999999999999764432211 1 111222333 338999998 799 99999999988888875332 22227777
Q ss_pred HHHHHHHHHHHhh-----hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHC
Q 017259 235 SAVAIASLDVIRD-----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 309 (374)
Q Consensus 235 ~~aa~~al~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (374)
+.++.+.+..... ++..++++++.+++.+.|++. +........+.++|..++.. +..+++++|+++
T Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~ 327 (363)
T PF00155_consen 257 QAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-----GITVLPPEAGFFLWVRLDPN----DAEELAQELLEE 327 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TSEEEHHSBSSEEEEEESHH----HHHHHHHHHHHH
T ss_pred hHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-----hhheeeccCccEEEEEcccc----hHHHHHHHHHHh
Confidence 7776666655432 123344444444444444433 23322233566667666543 568999999998
Q ss_pred -CeEeccC----CCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 310 -GILAKPT----HDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 310 -Gi~v~~~----~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
||.+.|+ ..+++|+++ ...+++++++++++|
T Consensus 328 ~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 328 YGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 9999884 378999996 578999999999886
No 202
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=3.6e-24 Score=202.81 Aligned_cols=296 Identities=14% Similarity=0.136 Sum_probs=197.2
Q ss_pred CcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
+.++++++.+++++|. +++++++|++++++.++..+.... .++| |+|++.++.|++.......+....+..
T Consensus 63 ~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~-~~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g~~ 136 (401)
T PRK10874 63 ARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPR-LQPG-----DEIIVSEAEHHANLVPWLMVAQQTGAK 136 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhcc-CCCc-----CEEEECCcchHHHHHHHHHHHHHhCCE
Confidence 3466788899998875 479999999999999988873211 3567 999999999876432221111100111
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 177 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~ 177 (374)
....+...+. ..|++++++.++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+ ++..
T Consensus 137 v~~v~~~~~~----~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~ 204 (401)
T PRK10874 137 VVKLPLGADR----LPDVDLLPELIT---PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF 204 (401)
T ss_pred EEEEecCCCC----cCCHHHHHHhcC---cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc
Confidence 0000110000 127899998886 57899999999999999998 9999999999999999999996 2111
Q ss_pred ccCcccccCCCCCcEEEe--cccccCCccchhhheeCHHHHhhcCCCCCC------------------C---CCCCCHHH
Q 017259 178 GRMLASDWEEVRPDMVIL--GKALGGGVIPVSAVLADKEVMLCIQPGEHG------------------S---TFGGNPLA 234 (374)
Q Consensus 178 g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~ 234 (374)
..+...+.+|+.++ +|.++ .. ++|+++.++++.+.+.+...+ . ..+.+..+
T Consensus 205 ----~~~~~~~~~d~~~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~ 278 (401)
T PRK10874 205 ----PADVQALDIDFYAFSGHKLYG-PT-GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAG 278 (401)
T ss_pred ----cCCchhcCCCEEEEecccccC-CC-ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHH
Confidence 11222344676654 49654 33 568888998888776543211 0 11346667
Q ss_pred HHHHHHHHHHHhhhc---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCe
Q 017259 235 SAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 311 (374)
Q Consensus 235 ~~aa~~al~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 311 (374)
..+..++++.+.+.+ ..++.+...+++.+.|++ +|++.....+.+.++.|.++.. +..++.+.|.++||
T Consensus 279 ~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~----~~g~~~~~~~~~~i~~~~~~~~----~~~~~~~~L~~~gI 350 (401)
T PRK10874 279 VIGLSAALEWLADIDINQAESWSRSLATLAEDALAK----LPGFRSFRCQDSSLLAFDFAGV----HHSDLVTLLAEYGI 350 (401)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCCCCcEEEEEECCc----CHHHHHHHHHHCCc
Confidence 777888887765443 344444455555555443 3333221122345666666543 56789999999999
Q ss_pred EeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 312 LAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 312 ~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.++++. .+++|++++..+|++|+++++++|+++++ .+
T Consensus 351 ~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~-~~ 399 (401)
T PRK10874 351 ALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALE-LL 399 (401)
T ss_pred EEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHH-Hh
Confidence 998742 47899999999999999999999999887 54
No 203
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=3.4e-24 Score=199.95 Aligned_cols=290 Identities=18% Similarity=0.157 Sum_probs=185.3
Q ss_pred CCCCcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...+|.+.+++++ ..+++++|+|+++++..+++++ . +| +.|++.+|+|.++...+...+....
T Consensus 54 Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l-----~-~g-----~~vlv~~P~y~~~~~~~~~~g~~~~ 122 (360)
T PRK07392 54 YPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL-----A-QL-----RAVYLITPAFGDYRRALRAFGATVK 122 (360)
T ss_pred CCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-----C-CC-----CeEEEECCCcHHHHHHHHHcCCeEE
Confidence 33344567888888876 5568999999999999888765 2 35 7999999999887666555443211
Q ss_pred ccccCCCCCCCcee-ccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 96 AIRGFGPLLPGHLK-VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 96 ~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. +...+... ....+++++++. . ++++++++.+++||+|.+.+ .++|.++++++++ +|+||+|.+|
T Consensus 123 ~v----~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~l~nP~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~ 189 (360)
T PRK07392 123 EL----PLPLDQPSPGLTLRLQTLPPQ---L-TPNDGLLLNNPHNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDF 189 (360)
T ss_pred EE----ecccccCCcccccCHHHHHHh---c-cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhh
Confidence 11 11000000 001134444332 2 36788888889999999886 6677888888986 6669999988
Q ss_pred cccccCcc-cccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 017259 175 ARSGRMLA-SDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 249 (374)
Q Consensus 175 ~~~g~~~~-~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~ 249 (374)
.+.+.... .......+.+ -||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++.++++. ..
T Consensus 190 ~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~ 263 (360)
T PRK07392 190 LPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLGYAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALAD---RD 263 (360)
T ss_pred ccCccccchHHHhhcCCCEEEEEechhhhcCCch-heeeeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhcc---HH
Confidence 55442211 1111222333 38999999 899 9999999998888876432 3467889999888888763 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH-HCCeEeccCC------CCEEE
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVR 322 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~lR 322 (374)
+.++.++..+..++.+.+....++++. ...+.++|+|+.++. +..++++.++ ++||.+.++. .+++|
T Consensus 264 ~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~~~fl~~~~~~-----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iR 337 (360)
T PRK07392 264 FQQQTWAWLPPAREALFQGLASLPGLT-PLPSAANFLLVQSQG-----SALQLQEKLLQQHRILIRDCLSFPELGDRYFR 337 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcE-ECCCCCCEEEEEcCC-----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEE
Confidence 444333333333333333333333322 233457777776653 4678888865 5799998863 47999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHh
Q 017259 323 LTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 323 i~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+ ..+.++.+++.+.|++++.
T Consensus 338 i~---~~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 338 VA---VRTEAENQRLLEALAAILA 358 (360)
T ss_pred EE---eCCHHHHHHHHHHHHHHhh
Confidence 99 3345566777777776654
No 204
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=4.8e-24 Score=198.83 Aligned_cols=313 Identities=16% Similarity=0.149 Sum_probs=203.7
Q ss_pred hHHHHHHHhc-cccCcCCCCCcHHHHHHHHhcccCCC----eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKL-TLSSRAFYNDKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~----~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+++... .+..+.+ .+.++++++.+++++|.+ .+++++||+++++.++..+ ..+| +++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~-----~~~~-----~~vi~~ 80 (355)
T TIGR03301 12 ATVRDAMLVDWCHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL-----VPRD-----GKLLVL 80 (355)
T ss_pred HHHHHHhhhhccCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc-----cCCC-----CeEEEE
Confidence 3455555442 2211122 467888999999988754 5778999999999999887 3444 666666
Q ss_pred ccCCCCccc-ccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTL-AAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
.+.+++... ......+...... +...+ ...|+++++++++++ ++++.+++.++++++|.+.+ +++|.
T Consensus 81 ~~~~~~~~~~~~a~~~g~~~~~i---~~~~~----~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~----~~~i~ 148 (355)
T TIGR03301 81 INGAYGERLAKICEYLGIPHTDL---NFSEY----EPPDLNRIEEALAAD-PDITHVATVHHETTTGILNP----LEAIA 148 (355)
T ss_pred CCCchhhHHHHHHHHcCCceEEE---ecCCC----CCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhH----HHHHH
Confidence 665555421 1111111111100 00000 012789999998764 45667777677788898887 99999
Q ss_pred HHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCC------------
Q 017259 156 DLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------------ 223 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~------------ 223 (374)
++|++||+++|+|++++ ++. .++....++.+.-+.+++|+++|+. ++|++++++++++.+....
T Consensus 149 ~l~~~~~~~livD~~~s-~g~--~~~~~~~~~~d~~~~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T TIGR03301 149 KVARSHGAVLIVDAMSS-FGA--IPIDIEELDVDALIASANKCLEGVP-GFGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred HHHHHcCCEEEEEeccc-cCC--cccchhhcCccEEEecCCcccccCC-ceeEEEECHHHHHHhhCCCCCceeeHHHHHH
Confidence 99999999999999876 321 2222232333222347789998766 7799999998887765210
Q ss_pred -----CCCCCCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccC
Q 017259 224 -----HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKT 293 (374)
Q Consensus 224 -----~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~ 293 (374)
....+..+...+.++.++++.+.++ +..++++++.+++.+.|+++... .... ....+.++++.++..
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~ 301 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQ---PLLPERWQSPIIVSFLYPDD 301 (355)
T ss_pred HhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCe---eecCCCCCCCcEEEEECCCC
Confidence 1124566778888888888877543 34556677777777777664211 1111 123355667766542
Q ss_pred CCchhHHHHHHHHHHCCeEeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 294 ALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 294 ~~~~~~~~~~~~l~~~Gi~v~~~~---~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
. ..+..++.+.|.++||.+.++. .+++||+++..+++++++++++.|++++
T Consensus 302 ~-~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 302 P-DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred C-cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 1 0145789999999999998874 3799999877889999999999998753
No 205
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=1.6e-24 Score=201.93 Aligned_cols=290 Identities=19% Similarity=0.229 Sum_probs=214.5
Q ss_pred CCcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 20 NDKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
...+++.++.++++.+. ++|+||+|.|++++.+...+... .++| |+|++.+-.||+....+..+....+.
T Consensus 65 t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~--~~~g-----deIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 65 TDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRS--LKPG-----DEIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhh--hcCC-----CEEEEccCcchhhHHHHHHHHHhcCc
Confidence 44677888889988853 56999999999999988877422 3455 99999999999987777766643222
Q ss_pred cccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 97 IRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
. +..++.+ +.+++++.++ ++|+++.++.++|.+|.+.| +++|.++||++|+++++|.+|
T Consensus 138 ~---------v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq 201 (405)
T COG0520 138 K---------VRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQ 201 (405)
T ss_pred E---------EEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECcc
Confidence 2 2233322 5788888666 78999999999999999999 999999999999999999999
Q ss_pred cCCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCC------------CCC---------
Q 017259 172 SGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG------------STF--------- 228 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~------------~~~--------- 228 (374)
+ .+ ....+...+..|+..|| |++.|+. ++|.+.+++++.+.+.+...+ .++
T Consensus 202 ~-~~----h~~idv~~l~~Df~afsgHKwl~gP~-GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~ 275 (405)
T COG0520 202 A-AG----HLPIDVQELGCDFLAFSGHKWLLGPT-GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEA 275 (405)
T ss_pred c-cC----ccCCCchhcCCCEEEEcccccccCCC-ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhcc
Confidence 7 21 12334455678999888 9888776 889999999999988654211 111
Q ss_pred -CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCcee-eEE--EEeeeEEEEeccCCCchhHHH
Q 017259 229 -GGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK-EVR--GRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 229 -~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~--~~g~~~~~~~~~~~~~~~~~~ 301 (374)
.++.....+..++++.++.. ++.++.+.+.+++.+.|+++ |++.. ... .+..++.|.++.. ...+
T Consensus 276 gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~----~~v~i~g~~~~~r~~~vsF~v~~~----~~~d 347 (405)
T COG0520 276 GTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSEL----PGVEIYGPPDADRGGIVSFNVKGI----HPHD 347 (405)
T ss_pred CCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCcccCceEEEEEeCCC----CHHH
Confidence 22444555556666665543 45566666666666666554 22221 122 3677888888765 6899
Q ss_pred HHHHHHHCCeEeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 302 ICLKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++..|.++||.++.++ ...+|+|+++.+|++|++++++.|+++.+
T Consensus 348 v~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 348 VATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 9999999999888763 23399999999999999999999998753
No 206
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-24 Score=201.32 Aligned_cols=283 Identities=14% Similarity=0.175 Sum_probs=187.7
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.....+|.+.+++++| .+++++|+|+++++..++.++. ++| .|+|++..|+|..+...+...+....
T Consensus 57 Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~-----~~g----~d~vlv~~P~y~~y~~~~~~~g~~v~ 127 (354)
T PRK04635 57 YPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC-----EPG----QDSIACFGPTYGMYAISAETFNVGVK 127 (354)
T ss_pred CCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc-----CCC----CCeEEEcCCChHHHHHHHHHcCCEEE
Confidence 555567889999999885 4589999999999999998873 333 27899999999765443333222111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. |...+.. .|++.++ .+ ++++++++++++||+|.+. +.+.+++|.+.|+ +++||+||+|.+|.
T Consensus 128 ~v----~~~~~~~----~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~ 191 (354)
T PRK04635 128 AL----PLTADYQ----LPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFC 191 (354)
T ss_pred EE----ecCCCCC----CCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhc
Confidence 10 1111100 1566665 22 3788999999999999988 5666666666554 59999999998774
Q ss_pred ccccCcccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---
Q 017259 176 RSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE--- 248 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~--- 248 (374)
.... ........+++ -||||.++ +|+ |+||+++++++.+.+... ...++.+.+.+.++.++++....+
T Consensus 192 ~~~s--~~~~~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~ 266 (354)
T PRK04635 192 PEYS--VADLLASYPNLVVLRTLSKAFALAGA-RCGFTLANEELIEILMRV--IAPYPVPLPVSEIATQALSEAGLARMK 266 (354)
T ss_pred cCcc--hHHHHhhCCCEEEEechHHHhhhhHH-HHhhhhCCHHHHHHHHhh--cCCCCCCHHHHHHHHHHHhcccHHHHH
Confidence 2211 11111222333 38999998 899 999999999988887642 234666777777777777531111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----CCEEEEe
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLT 324 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~lRi~ 324 (374)
+..+.++++++++.+.|+++ +. +...++.|.|+|+.++ +..++.+.|.++||.++... ++++||+
T Consensus 267 ~~~~~~~~~r~~l~~~L~~~----~~-~~~~~~~g~f~~~~~~------~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis 335 (354)
T PRK04635 267 FQVLDLNAQGARLQAALSMY----GG-AKVLEGNGNYVLAKFD------DVDAVFKALWDAGIVARAYKDPRLANCIRFS 335 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CC-ceECCCCCcEEEEECC------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEE
Confidence 22334444555555555543 21 2223345778887765 35678889999999997653 5799999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 017259 325 PPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 325 ~~~~~~~e~i~~~~~~l~~~ 344 (374)
..+.+++++++++|++.
T Consensus 336 ---~~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 336 ---FSNRAETDKLIGLIRNQ 352 (354)
T ss_pred ---eCCHHHHHHHHHHHHHh
Confidence 45889999999998754
No 207
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=3.8e-24 Score=202.15 Aligned_cols=299 Identities=13% Similarity=0.099 Sum_probs=185.7
Q ss_pred CCCCcHHHHHHHHhccc----CCCeE--EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 18 FYNDKFPVFAERLTSMF----GYDMV--LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~----~~~~~--~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
+..++++.+++++.+.. ..+++ ++|+|+++|+..+++++.. ..+| |+|++.+|+|.++...+...+
T Consensus 70 G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~---~~pG-----d~Vlv~~P~y~~~~~~~~~~g 141 (396)
T PRK09257 70 GLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKR---AFPD-----AKVWVSDPTWPNHRAIFEAAG 141 (396)
T ss_pred CCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHH---hCCC-----CeEEECCCCcccHHHHHHHcC
Confidence 33444555555554433 34566 9999999999999876631 3577 999999999988877666554
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.......... .+.. -.|++++++++++++++++++++.+++||||.+. +++.+++|+++|++||++||+||+|
T Consensus 142 ~~~v~v~~~~---~~~~---~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y 214 (396)
T PRK09257 142 LEVKTYPYYD---AATK---GLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADL-TPEQWDELAELLKERGLIPFLDIAY 214 (396)
T ss_pred CcEEEEeccc---cccC---ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccc
Confidence 4322111000 0000 0278999988876545567777788899999877 8999999999999999999999999
Q ss_pred cCCccc-cc-Cccc-ccCCCCCc---EEEecccccC-Cccchhhhee---CHH----HHhhcCCCCCCCCCCCCHHHHHH
Q 017259 172 SGLARS-GR-MLAS-DWEEVRPD---MVILGKALGG-GVIPVSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAV 237 (374)
Q Consensus 172 ~~~~~~-g~-~~~~-~~~~~~~d---~~s~sK~~~~-G~~~~G~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~a 237 (374)
.++.+. +. .... ...+..++ +.||||.++. |+ |+||+++ +++ +...+.........+.+.+++.+
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~ 293 (396)
T PRK09257 215 QGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAI 293 (396)
T ss_pred cccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc-cceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHH
Confidence 987542 11 1111 11111222 3499999995 99 9999863 333 33333322222333457777776
Q ss_pred HHHHHHHHh------h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHC
Q 017259 238 AIASLDVIR------D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 309 (374)
Q Consensus 238 a~~al~~~~------~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (374)
+...++... . ++.+++++++++.+.+.|++.... .......+..|.++|+.++ ...+.+.+.++
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~-~~~~~~~p~gg~~~w~~l~-------~~~~~~l~~~~ 365 (396)
T PRK09257 294 VATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPS-RDFDFIARQRGMFSYSGLT-------PEQVDRLREEF 365 (396)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcccccccceEEEecCCC-------HHHHHHHHHcC
Confidence 666654211 0 123445555555555555544210 0011122345677776542 23334444567
Q ss_pred CeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 310 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 310 Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
||.+.|.+ ||+++ ..+++++++++++|++++
T Consensus 366 ~V~~~p~~----ri~~~-~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 366 GVYAVGSG----RINVA-GLNESNIDYVAEAIAAVL 396 (396)
T ss_pred CEEEcCCC----eEEEe-eCCHHHHHHHHHHHHhhC
Confidence 99998752 99853 378999999999998753
No 208
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=4.9e-24 Score=198.11 Aligned_cols=289 Identities=19% Similarity=0.231 Sum_probs=201.0
Q ss_pred CCCCCcHHHHHHHHhccc----C----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccc
Q 017259 17 AFYNDKFPVFAERLTSMF----G----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI 88 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~----~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~ 88 (374)
+.+.+...++++.+++++ + .+++++++|+++++..++..+ .++| ++|++..++|++....+.
T Consensus 32 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~-----~~~g-----~~vl~~~~~~~~~~~~~~ 101 (350)
T cd00609 32 YYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL-----LNPG-----DEVLVPDPTYPGYEAAAR 101 (350)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-----CCCC-----CEEEEcCCCchhHHHHHH
Confidence 344556666666666655 2 558999999999999999888 4556 999999999877655544
Q ss_pred cccCCccccccCCCCCCCceeccCC-----C--HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 89 SMSCDNEAIRGFGPLLPGHLKVDFG-----D--ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-----d--~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
..... +..++.+ + .+.+++... +++++++++++++++|.+. +.+.+++|.++|+++
T Consensus 102 ~~~~~-------------~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~~~~~~ 164 (350)
T cd00609 102 LAGAE-------------VVPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVL-SEEELEELAELAKKH 164 (350)
T ss_pred HCCCE-------------EEEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHhC
Confidence 33211 1111111 1 244444332 6789999999888899776 688899999999999
Q ss_pred CCEEEEeccccCCcccccCcc--cccCCCCCcE--EEeccccc-CCccchhhheeCH-HHHhhcCCCCCCCCCCCCHHHH
Q 017259 162 NILMIADEIQSGLARSGRMLA--SDWEEVRPDM--VILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLAS 235 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~--~~~~~~~~d~--~s~sK~~~-~G~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
|+++|+|++|+++...+.... ........++ .|++|.++ +|. ++|+++.++ ++.+.+.......++..+..++
T Consensus 165 ~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~-~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
T cd00609 165 GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGL-RIGYLIAPPEELLERLKKLLPYTTSGPSTLSQ 243 (350)
T ss_pred CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCccc-ceEEEecCHHHHHHHHHHHHHhcccCCChHHH
Confidence 999999999997654443321 1111112233 38899999 788 999999988 7888887655555677788888
Q ss_pred HHHHHHHHHHh--hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 236 AVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 236 ~aa~~al~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
.++..+++... .+...++++++.+++.+.|+..... .......+.++++.++... ....+.+.|.+.||.+
T Consensus 244 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~~~~~~g~~~~~~~~~~~---~~~~~~~~l~~~gi~i 316 (350)
T cd00609 244 AAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPL----VVVKPSGGFFLWLDLPEGD---DEEFLERLLLEAGVVV 316 (350)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCc----cccCCCccEEEEEecCCCC---hHHHHHHHHHhCCEEE
Confidence 88888877652 2344556666666666666554221 1123455778887776542 4556677777789999
Q ss_pred ccC------CCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 314 KPT------HDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 314 ~~~------~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
.+. ...++|++++.. ++|+++++++|+
T Consensus 317 ~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 317 RPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 876 568999998766 999999999885
No 209
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.93 E-value=5.2e-24 Score=203.19 Aligned_cols=290 Identities=13% Similarity=0.182 Sum_probs=176.8
Q ss_pred eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc-ccccCCCCCCC-ceeccCCCH
Q 017259 38 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPG-HLKVDFGDI 115 (374)
Q Consensus 38 ~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~d~ 115 (374)
++++|+|+++|+..++.++.......+| |+|++..|+|..+...+........ ......+...+ ..... .|.
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pG-----D~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~-~d~ 230 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKG-----DKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQ-YPD 230 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCC-----CEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCC-CCH
Confidence 7999999999999998874322236788 9999999999776554333211111 11000000000 00011 167
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEeccccCCcccccCcccccCCCCC-c-
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRP-D- 191 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~--~i~li~Dea~~~~~~~g~~~~~~~~~~~~-d- 191 (374)
++++++++ ++++++++++++||+|.+. +++.+++|.++|++| |++||+||+|..|... ..+. ....+ .
T Consensus 231 ~~l~~~~~---~~~kai~l~nP~NPTG~vl-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~--~~sl--~~~~~~~v 302 (521)
T TIGR03801 231 KELEKLRD---PSIKALFVVNPSNPPSVAM-SDESIEKIVDIVANDRPDLMILTDDVYGTFVDD--FRSL--FAELPYNT 302 (521)
T ss_pred HHHHHhcC---CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHhcCCCeEEEECCCchhhccc--ccch--hhhCCCCE
Confidence 88887654 5889999888899999877 899999999999987 9999999999977431 1111 11122 2
Q ss_pred --EEEeccccc-CCccchhhheeCHH-----HHhh--------c------------------------CCCCCCCCCCCC
Q 017259 192 --MVILGKALG-GGVIPVSAVLADKE-----VMLC--------I------------------------QPGEHGSTFGGN 231 (374)
Q Consensus 192 --~~s~sK~~~-~G~~~~G~~~~~~~-----~~~~--------~------------------------~~~~~~~~~~~~ 231 (374)
+.||||.++ +|| |+||++++++ +++. + +.....++.+.+
T Consensus 303 I~v~SfSK~fg~~G~-RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s 381 (521)
T TIGR03801 303 IGVYSFSKYFGATGW-RLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLS 381 (521)
T ss_pred EEEEcchhhccCchh-hhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCC
Confidence 338999998 799 9999988754 2211 1 111233445556
Q ss_pred HHHHH--HHHHHHHHHhh-hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-------------
Q 017259 232 PLASA--VAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------------- 295 (374)
Q Consensus 232 ~~~~~--aa~~al~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------- 295 (374)
.+.|. ++.++...+.. +.+.+..++..++.++.+-+... + .........+.|++++++....
T Consensus 382 ~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~Lg-~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~ 459 (521)
T TIGR03801 382 TPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGLG-L-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK 459 (521)
T ss_pred cHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhcC-C-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence 66554 32122222222 23444444333333333322211 1 1111223346777777753110
Q ss_pred chhHHHHHHHHHHC-CeEeccCC-----CCEEEEecCCC-CCHHHHHHHHHHHHHHHh
Q 017259 296 PVSAYDICLKMKER-GILAKPTH-----DTIVRLTPPLS-ISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 ~~~~~~~~~~l~~~-Gi~v~~~~-----~~~lRi~~~~~-~~~e~i~~~~~~l~~~~~ 346 (374)
..+..+++.+|+++ ||.+.|+. .+++||+ ++ .+++++.++.++|+++++
T Consensus 460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~ 515 (521)
T TIGR03801 460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILD 515 (521)
T ss_pred cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHH
Confidence 01356788888754 99998863 4689999 44 688899999999999887
No 210
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=1.7e-23 Score=195.65 Aligned_cols=291 Identities=15% Similarity=0.153 Sum_probs=198.5
Q ss_pred CCcHHHHHHHHhcccCCC----eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccc-ccccccCCc
Q 017259 20 NDKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL-AAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~----~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~-~~~~~~~~~ 94 (374)
...++++++.|+++++.+ .+++|+||+++++.++..+ ..+| +++++..+++++... ......+
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l-----~~~~-----~~vlv~~~~~~~~~~~~~a~~~g-- 101 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA-----VPKD-----GKLLVVINGAYGARIVQIAEYLG-- 101 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc-----CCCC-----CeEEEEeCChhhHHHHHHHHHcC--
Confidence 445667888899888653 5899999999999999887 3445 666666666655431 1111111
Q ss_pred cccccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 95 EAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..+..++. .|+++++++++++ ++++++.+..+.+++|.+.+ +++|.++|++||+++|+|+
T Consensus 102 ----------~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~ 166 (363)
T TIGR02326 102 ----------IPHHVVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDA 166 (363)
T ss_pred ----------CceEEEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEc
Confidence 11222222 2789999998864 34667777778889999998 9999999999999999999
Q ss_pred cccCCcccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCC------------------CCCCCC
Q 017259 170 IQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------HGSTFG 229 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~------------------~~~~~~ 229 (374)
+|+ ++. .++... .+.+|++ +++|+++|+. ++|+++.+++..+.+.+.. ....|.
T Consensus 167 ~~~-~g~--~~~~~~--~~~~D~~~~s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft 240 (363)
T TIGR02326 167 MSS-FGG--IPIDIA--ELHIDYLISSANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFT 240 (363)
T ss_pred ccc-ccC--cccchh--hcCccEEEecCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCC
Confidence 886 432 222222 3345655 6669998777 7899999888776653210 112456
Q ss_pred CCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHH
Q 017259 230 GNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK 305 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 305 (374)
.+...+.+..++++.+.++ +..++++.+.+++++.|++++..+ ........+.+.++.+++.. ..+..++.+.
T Consensus 241 ~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 317 (363)
T TIGR02326 241 SPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEP--LLDDEIQSPIITSFYSPEDP-DYRFADFYQR 317 (363)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCee--ccCcccCCceEEEEECCCCC-CCCHHHHHHH
Confidence 6777888888888776443 355677777778888776653111 11111123445666665420 0156789999
Q ss_pred HHHCCeEeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 306 MKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 306 l~~~Gi~v~~~~---~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|.++||.++++. .+.+||++....+.+++++++++|++++.
T Consensus 318 L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 318 LKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999999998873 47899997666899999999999998875
No 211
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=1.2e-23 Score=196.29 Aligned_cols=291 Identities=17% Similarity=0.166 Sum_probs=196.5
Q ss_pred CCcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccc--ccccccCCc
Q 017259 20 NDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL--AAISMSCDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~ 94 (374)
.+..+++++.+++++|.+ .+++++||++++..++..+ ..+| ++|++..++|++... .+...+...
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~-----~~~g-----~~vl~~~~~~~~~~~~~~~~~~g~~~ 100 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL-----LEPG-----DKVLVGVNGVFGDRWADMAERYGADV 100 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-----CCCC-----CEEEEecCCchhHHHHHHHHHhCCCe
Confidence 344678999999988762 4789999999999999877 4567 899998877655321 111111111
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. .+...+ ...|++++++.+++ .++++++++++++++|.+.+ +++|.++|+++|+++++|++|+ +
T Consensus 101 ~~----v~~~~~----~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~ 165 (356)
T cd06451 101 DV----VEKPWG----EAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-L 165 (356)
T ss_pred EE----eecCCC----CCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-c
Confidence 10 011000 11278999998873 26788888888888999988 9999999999999999999986 3
Q ss_pred cccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCC--CCC-----------------CCCCCCCHH
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQP--GEH-----------------GSTFGGNPL 233 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~ 233 (374)
+. ..+... ....|++ +.+|.++++. ++|+++.++++.+.+.. ... ....+.+..
T Consensus 166 g~--~~~~~~--~~~~d~~~~s~~K~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 240 (356)
T cd06451 166 GG--EPFRMD--EWGVDVAYTGSQKALGAPP-GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVN 240 (356)
T ss_pred cC--cccccc--ccCccEEEecCchhccCCC-CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHH
Confidence 21 112222 2234555 5569999877 78999999888777652 110 112234555
Q ss_pred HHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCCchhHHHHHHHHHHC
Q 017259 234 ASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKER 309 (374)
Q Consensus 234 ~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (374)
.+.++.++++.+... .+.++.+++.+++.+.|+..... ....... .+.+.++.++... +..++++.|.++
T Consensus 241 ~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~~~ 314 (356)
T cd06451 241 LLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLK---LLAKPELRSPTVTAVLVPEGV---DGDEVVRRLMKR 314 (356)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCe---eccCcccCCCceEEEECCCCC---CHHHHHHHHHHh
Confidence 566777777776543 45667777777787877765311 2111111 2334455454332 578999999998
Q ss_pred -CeEeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 310 -GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 310 -Gi~v~~~----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
||.++++ .++++|++++..++++|+++++++|+++++
T Consensus 315 ~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 315 YNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 9999864 257999999989999999999999998764
No 212
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.93 E-value=1e-23 Score=197.92 Aligned_cols=285 Identities=16% Similarity=0.179 Sum_probs=192.9
Q ss_pred CcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
..+.++.+.++++++.+ ++++++|++++++.++.++... ..+| ++|++.+++|.+.......+....+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~--~~~g-----~~vl~~~~~~~~~~~~~~~~~~~~g-- 113 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRA--NKPG-----DEIVTSVMEHHSNIVPWQQLAERTG-- 113 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhc--CCCC-----CEEEECcchhHHHHHHHHHHHhhcC--
Confidence 33567888889888755 8999999999999999888520 0156 8999999887653222111110001
Q ss_pred ccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+..++. -|++++++.+. ++++++++..+.+++|.+.+ +++|.++|++||++|++|++|+
T Consensus 114 -------~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~ 179 (373)
T cd06453 114 -------AKLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS 179 (373)
T ss_pred -------cEEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh
Confidence 11112221 17899999887 47889999889999999988 9999999999999999999987
Q ss_pred CCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCC---------------------CCC
Q 017259 173 GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFG 229 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~---------------------~~~ 229 (374)
.. .. ........+|++++| |.+++ . ++|+++.++++.+.+.+...+. ..+
T Consensus 180 ~~-~~----~~~~~~~~~d~~~~s~~K~~~~-~-g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t 252 (373)
T cd06453 180 AG-HM----PVDVQDLGCDFLAFSGHKMLGP-T-GIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGT 252 (373)
T ss_pred cC-ce----eeeccccCCCEEEeccccccCC-C-CcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCC
Confidence 21 11 112223456888777 99887 5 7899989988888776532110 113
Q ss_pred CCHHHHHHHHHHHHHHhhhc---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 230 GNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
++..+..+..++++.+.+.+ +.++.+++.+++++.++++.. + .........+.++.+.++.. +..++.++|
T Consensus 253 ~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~~----~~~~i~~~l 326 (373)
T cd06453 253 PNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPG-V-RVYGDAEDRAGVVSFNLEGI----HPHDVATIL 326 (373)
T ss_pred CCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCC-e-EEeCCccccCCeEEEEECCc----CHHHHHHHH
Confidence 45556667777788776543 344445555555555544311 0 01111223466777776543 578999999
Q ss_pred HHCCeEeccCC------------CCEEEEecCCCCCHHHHHHHHHHH
Q 017259 307 KERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 307 ~~~Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
.++||.++++. .+++|++++..+|++|+++++++|
T Consensus 327 ~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 327 DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 99999986532 579999999999999999998864
No 213
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=5.4e-23 Score=192.41 Aligned_cols=283 Identities=18% Similarity=0.186 Sum_probs=191.9
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
..+.+++++++|+++++.+..++.++|+.++...+..+ .++ +.+|+.+..+|+.+........ ..
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~-----~~~------~d~ii~d~~~H~sv~~~~~~~~--~~-- 118 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHL-----SSV------TDYVLWDEQVHISVVYSLSVIS--GW-- 118 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHh-----CCC------CCEEEEEhhhhHHHHHHHHHcC--Cc--
Confidence 56789999999999999888888889988886544433 223 3566677777887766554421 11
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-C-
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G- 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~- 173 (374)
...++++|+++|++.++... +++++++++++++++|.+.| +++|.++|+++|+++++||+|+ |
T Consensus 119 --------~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~ 186 (370)
T PRK05937 119 --------HQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGI 186 (370)
T ss_pred --------eEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccc
Confidence 12235679999999998531 34667888999999999999 9999999999999999999998 4
Q ss_pred CcccccCcccc--cCCCCCcEEEecccccC-CccchhhheeCHHHHhhcCC--CCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 174 LARSGRMLASD--WEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 174 ~~~~g~~~~~~--~~~~~~d~~s~sK~~~~-G~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
++..+..+... .....+++.|+||.+|+ |. +++..+++...+.. .....+.+.++++.+++.++++.+.+.
T Consensus 187 ~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~----~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~ 262 (370)
T PRK05937 187 FGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA----ALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE 262 (370)
T ss_pred cCCCCCchHHhhCCCCCcEEEEechhhhhcCce----EEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC
Confidence 44444332211 11223567799999874 33 34555554444331 112333456777888888888887543
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC---CCCEEEE
Q 017259 249 --KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRL 323 (374)
Q Consensus 249 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~~~~lRi 323 (374)
...++++++.+++++.+... .+ +....+.++.. ...++.+.|.++||.++.. ..+++|+
T Consensus 263 ~~~~~~~l~~l~~~l~~~l~~~---~~---------~~~~~i~~~~~----~~~~~~~~L~~~gi~v~~~~~~~~~~iRi 326 (370)
T PRK05937 263 GELARKQLFRLKEYFAQKFSSA---AP---------GCVQPIFLPGI----SEQELYSKLVETGIRVGVVCFPTGPFLRV 326 (370)
T ss_pred cHHHHHHHHHHHHHHHHhcCCC---CC---------CCEEEEEeCCh----hHHHHHHHHHHCCeeEEeeCCCCCCEEEE
Confidence 23445555555555444221 00 11112334433 4678999999999988742 2568999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 324 TPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 324 ~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+++..+|++|++++++.|+++++ ++
T Consensus 327 s~~~~~t~edid~l~~~L~~~~~-~~ 351 (370)
T PRK05937 327 NLHAFNTEDEVDILVSVLATYLE-KY 351 (370)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence 99999999999999999999998 55
No 214
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=2.8e-23 Score=210.10 Aligned_cols=299 Identities=13% Similarity=0.138 Sum_probs=189.6
Q ss_pred CCCcHHHHHHHHhcccCC-----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 19 YNDKFPVFAERLTSMFGY-----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~-----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
..+.+..+++++++.+|. +++++++|+++++..++.++ .++| |.|++..|+|..+...+...+..
T Consensus 732 ~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL-----l~pG-----D~VLVp~PtY~~Y~~~a~~~Ga~ 801 (1082)
T PLN02672 732 ETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC-----VQEG-----GTLCFPAGSNGTYVSAAKFLKAN 801 (1082)
T ss_pred ChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH-----cCCC-----CEEEEeCCChHHHHHHHHHcCCE
Confidence 355678899999987643 27899999988888888877 5677 99999999998776666555432
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.... |...+. .+. .|.++++++++.. .+..+++++|.+||||.+. +++.+++|.++|++||++||+||+|++
T Consensus 802 vv~V----pl~~e~-gf~-lD~d~Le~al~~~-~~~~I~L~nPnhNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsd 873 (1082)
T PLN02672 802 FRRI----PTKSSD-GFK-LTAKTLASTLETV-KKPWVYISGPTINPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSG 873 (1082)
T ss_pred EEEE----eccccc-CCC-CCHHHHHHHhccC-CCCEEEEECcCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCc
Confidence 2111 111000 000 1678899888632 1234555555558899777 899999999999999999999999997
Q ss_pred CcccccCc---ccc----cC-CCCC--cE---EEeccccc-CCccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHH
Q 017259 174 LARSGRML---ASD----WE-EVRP--DM---VILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVA 238 (374)
Q Consensus 174 ~~~~g~~~---~~~----~~-~~~~--d~---~s~sK~~~-~G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa 238 (374)
+.+.+... ... .+ ...+ .+ -||||.++ +|+ |+||++++ +++++.+...... .......+.++
T Consensus 874 L~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL-RIGylIap~~eLi~~l~~~~~~--s~~~~~~q~Aa 950 (1082)
T PLN02672 874 LEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH-EFGFLALNDSVLIDAFHSAPGL--SRPHSTLKYTI 950 (1082)
T ss_pred cccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH-HheeEEeCCHHHHHHHHHhhhh--cCCCcHHHHHH
Confidence 65544321 110 11 1111 22 28999888 699 99999986 4477877643111 11122233333
Q ss_pred HHHHHHHh--hh-------cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEE-eeeEEEEeccC--------------C
Q 017259 239 IASLDVIR--DE-------KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLFNAVEFDKT--------------A 294 (374)
Q Consensus 239 ~~al~~~~--~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--------------~ 294 (374)
.+++.... .. +.++.++++++++.+.|+.. +. ...++. +.++|+.++.. .
T Consensus 951 aaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-----Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~ 1024 (1082)
T PLN02672 951 KKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-----GW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTG 1024 (1082)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-eEecCCcEEEEEEEccccccccccccccccccc
Confidence 33332221 11 23344555566666655543 22 223333 45555543210 0
Q ss_pred CchhHHHHHHHHHHC-CeEeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 295 LPVSAYDICLKMKER-GILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 295 ~~~~~~~~~~~l~~~-Gi~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+..++++.|+++ ||.+.|+. ++++||++ ..+++++++++++|+++.+
T Consensus 1025 ~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsf--a~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1025 IKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSF--ALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 012578899999976 99999863 58999994 4688899999999998765
No 215
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.92 E-value=1e-22 Score=193.09 Aligned_cols=289 Identities=14% Similarity=0.147 Sum_probs=197.2
Q ss_pred CcHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
+..+++++.++++++. +++++|+|++++++.++..+... ..++| |+|++.++.|++.......+....+
T Consensus 67 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~-~~~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g-- 138 (406)
T PRK09295 67 EKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNS-NVRAG-----DNIIISEMEHHANIVPWQMLCARVG-- 138 (406)
T ss_pred HHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhh-cCCCc-----CEEEECcchhhHHHHHHHHHHHHcC--
Confidence 3466788889988864 48999999999999888765211 14567 9999999888765333222211101
Q ss_pred ccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+..++. .|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++|+
T Consensus 139 -------~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~ 204 (406)
T PRK09295 139 -------AELRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA 204 (406)
T ss_pred -------cEEEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc
Confidence 11111211 27889988886 57899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEEEe--cccccCCccchhhheeCHHHHhhcCCCCCC----------------------CCC
Q 017259 173 GLARSGRMLASDWEEVRPDMVIL--GKALGGGVIPVSAVLADKEVMLCIQPGEHG----------------------STF 228 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~----------------------~~~ 228 (374)
++.. .+.. ....+|++++ +|.++ +. ++|+++.++++.+.+.+...+ ...
T Consensus 205 -~g~~--~~~~--~~~~~D~~~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~G 277 (406)
T PRK09295 205 -VMHH--PVDV--QALDCDFYVFSGHKLYG-PT-GIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAG 277 (406)
T ss_pred -cCcc--ccCc--hhcCCCEEEeehhhccC-CC-CcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCC
Confidence 3211 2222 2345676644 59554 44 578898888877665432111 111
Q ss_pred CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeE-EEEeeeEEEEeccCCCchhHHHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
+.+..+..++.++++.+.+. .+.++.+.+.+++++.|+++ +++.... ..+..++.|.++.. ...++.+
T Consensus 278 T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~----~~~~~~~~~~~~~iv~~~~~~~----~~~~~~~ 349 (406)
T PRK09295 278 TPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV----PDLTLYGPQNRLGVIAFNLGKH----HAYDVGS 349 (406)
T ss_pred CccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCceEEEEEECCc----CHHHHHH
Confidence 45777888888888887653 44566666666666666543 2221111 12345666666643 5678889
Q ss_pred HHHHCCeEeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 305 KMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 305 ~l~~~Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|.++||.++.+. ++.+|++++..+|++|+++++++|+++..
T Consensus 350 ~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 350 FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 9999999997542 36799999999999999999999988764
No 216
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=9.6e-23 Score=191.75 Aligned_cols=294 Identities=15% Similarity=0.095 Sum_probs=192.6
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
.+..+++++.+++++|.+++++++|+++++..++..+ ..+| |+|++..++|.+....+...+..
T Consensus 62 ~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l-----~~~g-----d~Vlv~~~~h~s~~~~~~~~G~~------ 125 (387)
T PRK09331 62 KPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSL-----CKKG-----DYVVLDGLAHYTSYVAAERAGLN------ 125 (387)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEECCCchHHHHHHHHHcCCE------
Confidence 4568899999999999999999999999999999888 4567 99999988865544332221111
Q ss_pred CCCCCCCceeccC-------CCHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 100 FGPLLPGHLKVDF-------GDITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 100 ~~~~~~~~~~~~~-------~d~~~le~~l~~~----~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
+..++. .|+++++++++++ .+++++++++++++++|.+.+ +++|.++|++||+++|+|
T Consensus 126 -------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD 194 (387)
T PRK09331 126 -------VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLN 194 (387)
T ss_pred -------EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEE
Confidence 111111 2799999998753 246899999999889999988 999999999999999999
Q ss_pred ccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCCC------C--CCCHHHHHHHHH
Q 017259 169 EIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST------F--GGNPLASAVAIA 240 (374)
Q Consensus 169 ea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~aa~~ 240 (374)
++|+ .+.. ++....++.+..+.|++|+++++. ++|++++++++++.+......+. + +.......++++
T Consensus 195 ~a~~-~g~~--~~~~~~~g~D~~~~s~~K~l~~~~-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 270 (387)
T PRK09331 195 GAYT-VGRM--PVDGKKLGADFIVGSGHKSMAASA-PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMA 270 (387)
T ss_pred CCcc-cCCc--CCCHHHcCCCEEEeeCcccccCCC-CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHH
Confidence 9997 2111 112222333333447789999877 89999999988887654311110 1 112223444455
Q ss_pred HHHHHhhh-cHHHHHHHHHHHHHHHHHHH-HHhCCCceeeEEEEeeeEEEEeccC-----CCchhHHHHHHHHHHCCeEe
Q 017259 241 SLDVIRDE-KLAERSAHLGEELRQHLFKI-QQQFPNYVKEVRGRGLFNAVEFDKT-----ALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 241 al~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~l~~~Gi~v 313 (374)
+++.+.+. +..++..++.+++++.|+++ +.. +.........++.++.+.. ....++.++.+.|.++||..
T Consensus 271 al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~ 347 (387)
T PRK09331 271 SFPHVVERVKRWDEEVKKARWFVDELEKIEGFK---QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHG 347 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE---EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceE
Confidence 55544332 23444455666777766655 211 1110012344454443311 00113467999999999985
Q ss_pred cc-CCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 314 KP-THDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 314 ~~-~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+ +....+|+.. ...+++++++++++|+++++ ++
T Consensus 348 ~~~~~~~i~ri~~-~g~t~~di~~l~~aL~~i~~-~~ 382 (387)
T PRK09331 348 IKPGATKEFKLST-YGLTWEQVEYVADAFKEIAE-KY 382 (387)
T ss_pred EccCCceEEEEEe-ccCCHHHHHHHHHHHHHHHH-hc
Confidence 44 4445566653 34799999999999999987 53
No 217
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=1.8e-22 Score=189.35 Aligned_cols=286 Identities=16% Similarity=0.129 Sum_probs=187.9
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
.++++++|++++|.+ .+++++||++++..+++.++... ..+| ++|++.+++|..+...+... +
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~-~~~~-----~~vl~~~~~h~s~~~~~~~~-g-------- 125 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLA-KAEK-----PNIVVPESAHFSFDKAADML-G-------- 125 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhc-cCCC-----ceEEecCcchHHHHHHHHHc-C--------
Confidence 367889999988764 57899999999999998886431 1234 88999888764432222111 1
Q ss_pred CCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 101 GPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 101 ~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
..+..++. .|+++++++++ ++++.+++..+.+++|.+.+ +++|.++|+++|+++++|++|+++.
T Consensus 126 ----~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~vi~~~~~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~ 194 (371)
T PRK13520 126 ----VELRRAPLDDDYRVDVKAVEDLID---DNTIGIVGIAGTTELGQVDP----IPELSKIALENGIFLHVDAAFGGFV 194 (371)
T ss_pred ----ceEEEecCCCCCcCCHHHHHHHHh---hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHH
Confidence 11112221 27999999997 35666666666678899998 9999999999999999999998542
Q ss_pred cc--ccCcccccCCCCCcEEEec--ccccCCccchhhhee-CHHHHhhcCCCCCC----C----CCCCCHHHHHHHHHHH
Q 017259 176 RS--GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHG----S----TFGGNPLASAVAIASL 242 (374)
Q Consensus 176 ~~--g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~-~~~~~~~~~~~~~~----~----~~~~~~~~~~aa~~al 242 (374)
.. .............|.+++| |...+|. |+|+++. ++++.+.+...... . ..+.+...++++.+++
T Consensus 195 ~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al 273 (371)
T PRK13520 195 IPFLDDPPNFDFSLPGVDSITIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVM 273 (371)
T ss_pred HHhhcCCCCccccCCCCceEEECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHH
Confidence 10 1110111111234555544 6545577 8888665 55566665421000 0 0112345567777788
Q ss_pred HHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-C
Q 017259 243 DVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-D 318 (374)
Q Consensus 243 ~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~ 318 (374)
+.+..+ +..++..++.+++.+.|+++. +.....+...++.+.++ +..++.+.|.++||.++.+. +
T Consensus 274 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v~~~~~~ 342 (371)
T PRK13520 274 KYLGREGYRKVVERCMENTRWLAEELKERG-----FEPVIEPVLNIVAFDDP------NPDEVREKLRERGWRVSVTRCP 342 (371)
T ss_pred hhhcHhHHHHHHHHHHHHHHHHHHHHHhCC-----CEEecCCCceEEEEecC------CHHHHHHHHHHCCceeccCCCC
Confidence 766544 356777777777777776642 21111223445555554 46789999999999998764 5
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++|++++..+|++|++++++.|+++++
T Consensus 343 ~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 343 EALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 6899998888999999999999998875
No 218
>PLN02397 aspartate transaminase
Probab=99.91 E-value=6.9e-23 Score=194.55 Aligned_cols=253 Identities=16% Similarity=0.116 Sum_probs=160.2
Q ss_pred cEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 017259 71 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY 150 (374)
Q Consensus 71 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~ 150 (374)
|+|++++|+|..+...+...+..........+ .+. -.|++.+++.+.++.++++++++++++||||.+. +++.
T Consensus 143 d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~--~~~----~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~-s~e~ 215 (423)
T PLN02397 143 STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDP--KTR----GLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDP-TPEQ 215 (423)
T ss_pred CEEEEeCCCchhHHHHHHHcCCeEEEeecccC--cCC----ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC-CHHH
Confidence 99999999998876666555443222110000 000 1278888888875545678888888999999888 8999
Q ss_pred HHHHHHHHHhcCCEEEEeccccCCccccc--C-ccc-ccCCCCCcE---EEeccccc-CCccchhhhe--e-CHHHHh--
Q 017259 151 LKAVRDLCSKYNILMIADEIQSGLARSGR--M-LAS-DWEEVRPDM---VILGKALG-GGVIPVSAVL--A-DKEVML-- 217 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~Dea~~~~~~~g~--~-~~~-~~~~~~~d~---~s~sK~~~-~G~~~~G~~~--~-~~~~~~-- 217 (374)
+++|+++|++||++||+||+|.+|.+.+. . ... .......++ -||||.++ .|+ |+||++ . ++++++
T Consensus 216 l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~~~~~ 294 (423)
T PLN02397 216 WEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGE-RVGALSVVCKSADVAVRV 294 (423)
T ss_pred HHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccc-cceEEEEEeCCHHHHHHH
Confidence 99999999999999999999998865331 1 111 111111223 38999999 799 999974 3 555433
Q ss_pred --hcCCCCCCCCCCCCHHHHHHHHHHHHHHh--------hhcHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeE
Q 017259 218 --CIQPGEHGSTFGGNPLASAVAIASLDVIR--------DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFN 286 (374)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~ 286 (374)
.+........++.+.+++.++..+++.-. -+++.++++++++.+.+.|+++.. +..... .+..|.|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~--~~~~~~~~p~gg~fl 372 (423)
T PLN02397 295 KSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGS--PGDWSHITKQIGMFS 372 (423)
T ss_pred HHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCcccCCceEEE
Confidence 33222122233556777777766664311 012344556666666666665421 000111 23345555
Q ss_pred EEEeccCCCchhHHHHHHHHHH-CCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 287 AVEFDKTALPVSAYDICLKMKE-RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+.++ .+++++|++ .||.+.+.+ ||++. ..+++.+++++++|+++++
T Consensus 373 ~~~l~--------~~~~~~Ll~~~~V~v~~~~----Ri~~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 373 FTGLN--------KEQVDRMTKEYHIYMTRDG----RISMA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ecCCC--------HHHHHHHHHhCCEEECCCC----eEEEe-eCCHHHHHHHHHHHHHHHh
Confidence 55432 358888865 599997443 99842 2788999999999999875
No 219
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=2.7e-22 Score=190.22 Aligned_cols=288 Identities=14% Similarity=0.132 Sum_probs=194.8
Q ss_pred cHHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 22 KFPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
..+++.+.+++++|. +++++++|++++++.++..+... ...+| ++|++.++.|++.......+....+.
T Consensus 63 ~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~-~~~~g-----~~vl~~~~~~~s~~~~~~~~~~~~g~-- 134 (403)
T TIGR01979 63 AYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDS-NLKAG-----DEIVISEMEHHANIVPWQLLAERTGA-- 134 (403)
T ss_pred HHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhh-cCCCC-----CEEEECcchhhHHHHHHHHHHHhcCc--
Confidence 456788889988864 47999999999999888776311 13566 89999999876643222111110011
Q ss_pred cCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 99 GFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.+..++. .|++++++.+. ++++++++..+++++|.+.+ +++|.++|++||+++|+|++|+.
T Consensus 135 -------~~~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~ 200 (403)
T TIGR01979 135 -------TLKFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAV 200 (403)
T ss_pred -------EEEEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhhc
Confidence 1111111 26888988886 57899999999999999998 99999999999999999999972
Q ss_pred CcccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCC---------------------CCCC
Q 017259 174 LARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGG 230 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~---------------------~~~~ 230 (374)
. . .. .+.....+|++ +++|.++ +. ++|+++.++++.+.+.+...+. ..+.
T Consensus 201 g-~--~~--~~~~~~~~d~~~~s~~K~~g-p~-G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~ 273 (403)
T TIGR01979 201 P-H--MP--VDVQALDCDFYVFSGHKMYG-PT-GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTP 273 (403)
T ss_pred C-c--cc--cCccccCCCEEEEecccccC-CC-CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCc
Confidence 1 1 11 12223345665 6669764 44 5788888888777665321110 0134
Q ss_pred CHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceee----EEEEeeeEEEEeccCCCchhHHHHH
Q 017259 231 NPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKE----VRGRGLFNAVEFDKTALPVSAYDIC 303 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (374)
+..+++++.++++.+.+. .+.++..++.+++++.|+.+ +++... ...++.++.|.++.. +..++.
T Consensus 274 ~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----~g~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~ 345 (403)
T TIGR01979 274 NIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEI----PGLRIYGPRDAEDRGGIISFNVEGV----HPHDVG 345 (403)
T ss_pred cHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCccccCceEEEEeCCc----CHHHHH
Confidence 556667777777776542 44566666666666666543 222111 112356777777543 467889
Q ss_pred HHHHHCCeEeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 304 LKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 304 ~~l~~~Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.|.++||.++.+. .+++||+++..++++|+++++++|+++++
T Consensus 346 ~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 346 TILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred HHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 99999999997532 57899999999999999999999999887
No 220
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=7.1e-23 Score=193.95 Aligned_cols=287 Identities=17% Similarity=0.144 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC-ccc
Q 017259 20 NDKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD-NEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~-~~~ 96 (374)
.++++++++++++++|.+ ++++++||+++.+.++..+... ..+| |+|++.++. |+.+.......+. .+.
T Consensus 63 ~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~--~~~g-----d~Vl~~~~~-h~~~~~~~~~~~~~~g~ 134 (398)
T cd00613 63 LQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRA--YHKR-----NKVLVPDSA-HPTNPAVARTRGEPLGI 134 (398)
T ss_pred HHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhc--ccCC-----CEEEEcCcc-CcchHHHHHHhcccCCc
Confidence 346778999999988766 7888887877777776666421 1135 889888776 4554444433321 111
Q ss_pred cccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 97 IRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.+..+++ .|++++++++. ++++++++++++ ++|.+. +++++|.++|++||+++|+|++|
T Consensus 135 ---------~~~~v~~~~~~~~d~~~l~~~i~---~~t~~viv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~ 198 (398)
T cd00613 135 ---------EVVEVPSDEGGTVDLEALKEEVS---EEVAALMVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDN 198 (398)
T ss_pred ---------EEEEeccCCCCCcCHHHHHHhcC---CCeEEEEEECCC-CCceec---chHHHHHHHHHhcCCEEEEEecc
Confidence 1112222 26888888886 579999998874 677764 34699999999999999999998
Q ss_pred cCCcccccCcccccCCCCCcEE--Eeccccc----CCccchhhheeCHHHHhhcCCC-----------------------
Q 017259 172 SGLARSGRMLASDWEEVRPDMV--ILGKALG----GGVIPVSAVLADKEVMLCIQPG----------------------- 222 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~----~G~~~~G~~~~~~~~~~~~~~~----------------------- 222 (374)
+...... ... ...+|++ +++|.+. ||+ ++|+++.++++.+.+...
T Consensus 199 ~~~~~~~---~~~--~~~~d~~~~s~~K~~~p~g~Ggp-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (398)
T cd00613 199 LNLTGLK---PPG--EYGADIVVGNLQKTGVPHGGGGP-GAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQ 272 (398)
T ss_pred ccccCCC---ChH--HcCCCEEEeeccccCCCCCCCCC-ceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchh
Confidence 6321111 111 1245665 6678763 367 888898888877765321
Q ss_pred ------CCCCCCCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccC
Q 017259 223 ------EHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 293 (374)
Q Consensus 223 ------~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 293 (374)
....+++.+.+.++++..+++.+.++ ++.++.+++.++++++|+++.... ... ......+++.++..
T Consensus 273 ~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~--~~~--~~~~~~v~~~~~~~ 348 (398)
T cd00613 273 HIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL--PFN--GPFFHEFVLRLPPL 348 (398)
T ss_pred hcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cCC--CCeeEEEEEEcCCc
Confidence 01123444556666666666665443 456788888888888887753221 011 11222334555431
Q ss_pred CCchhHHHHHHHHHHCCeEeccC---CCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 294 ALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 294 ~~~~~~~~~~~~l~~~Gi~v~~~---~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
.+.+..++++.|.++||.+... ..+.+|++|+..+|++|++++++.|
T Consensus 349 -~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 349 -YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred -chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 0125788999999999988653 4689999999999999999998864
No 221
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=8.3e-23 Score=189.23 Aligned_cols=294 Identities=15% Similarity=0.102 Sum_probs=190.5
Q ss_pred CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc--ccccCCc
Q 017259 17 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA--ISMSCDN 94 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~--~~~~~~~ 94 (374)
+++.+.+.++++.+++++|.+++++++||++++..++..+ ..+| |+|++.+++|....... ..+.+..
T Consensus 28 ~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l-----~~~g-----d~v~~~~~~~~~~~~~~~~~~~~g~~ 97 (338)
T cd06502 28 YGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAH-----TQPG-----GSVICHETAHIYTDEAGAPEFLSGVK 97 (338)
T ss_pred cCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHh-----cCCC-----CeEEEecCcceeeecCCcHHHHcCce
Confidence 3457788999999999999778999999999999998877 4566 99999888864332211 1111111
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
... .+ .+ . ...|++++++++++.. ++++++++++++|+ |.+. +.+.+++|.++|++||+++|+||+
T Consensus 98 ~~~---v~--~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~-~~~~l~~i~~~~~~~~~~livDea 167 (338)
T cd06502 98 LLP---VP--GE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVY-PLDELKAISALAKENGLPLHLDGA 167 (338)
T ss_pred EEe---ec--CC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-cccc-CHHHHHHHHHHHHHcCCeEeechH
Confidence 110 01 00 0 0137899999887421 36788888887775 5555 788899999999999999999999
Q ss_pred ccCC--cccccCcccccCCCCCcEE--EecccccCCccchhh-heeCHHHHhhcCCCC--CCCCCCCCHHHHHHHHHHHH
Q 017259 171 QSGL--ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSA-VLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 171 ~~~~--~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~ 243 (374)
|..+ ...|. ........+|++ ++||+++. +.|+ ++.++++.+.+.... .+.++..+.++++++.++++
T Consensus 168 ~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~ 242 (338)
T cd06502 168 RLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALE 242 (338)
T ss_pred HHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhc
Confidence 8522 11121 111111234444 78899873 2344 456888877776432 22344556677777777665
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH---HCCeEeccCCCCE
Q 017259 244 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK---ERGILAKPTHDTI 320 (374)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~---~~Gi~v~~~~~~~ 320 (374)
.....+..+++.++.+++.+.|+++... + ..+.++++.+.++... ....++.+.+. ++|+.+.+...++
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~--~~~~~~~~~v~~~~~~--~~~~~l~~~l~~~~~~gi~~~~~~~~~ 314 (338)
T cd06502 243 NDLWLRRLRHDHEMARRLAEALEELGGL----E--SEVQTNIVLLDPVEAN--AVFVELSKEAIERRGEGVLFYAWGEGG 314 (338)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCC----c--ccccCCeEEEecCCcc--HHHHHHHHHHHHhhhCCEEEEecCCCe
Confidence 3211234566666777777777665321 1 2234555555553221 12334455544 6799998876699
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 017259 321 VRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 321 lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+|+++++.++++|++++++++++
T Consensus 315 lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 315 VRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEEeecCCCHHHHHHHHHHHhc
Confidence 99999999999999999998864
No 222
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=3.7e-22 Score=187.71 Aligned_cols=293 Identities=17% Similarity=0.168 Sum_probs=191.1
Q ss_pred cHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 22 KFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
.++++++++++++|. +++++++|++++++.++..+... ..+| ++|++....|++.......+... +....
T Consensus 43 ~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~--~~~~-----~~vv~~~~~~~s~~~~~~~~~~~-G~~v~ 114 (379)
T TIGR03402 43 AVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA--QPEK-----RHIITTAVEHPAVLSLCQHLEKQ-GYKVT 114 (379)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--cCCC-----CeEEEcccccHHHHHHHHHHHHc-CCEEE
Confidence 456778889998864 47999999999999999877421 1233 78888887776543322222111 11111
Q ss_pred CCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccccc
Q 017259 100 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~ 179 (374)
..+...+.. .|+++++++++ +++++++++.++|++|.+.+ +++|.++|++||+++++|++|+ ++ .
T Consensus 115 ~v~~~~~g~----~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g---~ 179 (379)
T TIGR03402 115 YLPVDEEGR----LDLEELRAAIT---DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VG---K 179 (379)
T ss_pred EEccCCCCc----CCHHHHHHhcC---CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cc---c
Confidence 111111110 27899998886 57889999999999999998 9999999999999999999997 32 1
Q ss_pred CcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCC-------CCCCCCCHHHHHHHHHHHHHHhhh--
Q 017259 180 MLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRDE-- 248 (374)
Q Consensus 180 ~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~~-- 248 (374)
...+......|++++| | +.|+. ++|+++.+++. .+.+... ......+..+..+..++++.+.+.
T Consensus 180 -~~~~~~~~~~D~~~~s~~K-~~gp~-G~g~l~v~~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~ 254 (379)
T TIGR03402 180 -IPIDLKEMNIDMLSLSGHK-LHGPK-GVGALYIRKGT--RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLE 254 (379)
T ss_pred -cccCcccCCCCEEEEcHHH-cCCCC-ceEEEEECCCC--CCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHH
Confidence 1223334567888888 9 65555 67887777653 2222211 112345667777777777776442
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE---EEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC--------
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------- 317 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------- 317 (374)
+..++.+++.+++++.|++ .+|++..... ..+..+.+.++.. +..++.+.|.++||.++.+.
T Consensus 255 ~~~~~~~~l~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~v~~g~~c~~~~~~ 327 (379)
T TIGR03402 255 EENTRVRALRDRLEAGLLA---RIPDARLNGDPTKRLPNTVNISFEYI----EGEAILLLLDMEGICASSGSACTSGSLE 327 (379)
T ss_pred HHHHHHHHHHHHHHHHHHh---hCCCEEEeCCCccCCCCEEEEEecCC----CHHHHHHhhccCCEEEEchhhcCCCCCC
Confidence 3335555555566555543 1222221111 1122344444433 57789999989999997642
Q ss_pred ---------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 318 ---------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 318 ---------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+.+|++++..+|++|++++++.|+++++ ++.
T Consensus 328 ~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~-~~~ 374 (379)
T TIGR03402 328 PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA-RLR 374 (379)
T ss_pred cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 36899999999999999999999999998 653
No 223
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=2.2e-22 Score=187.90 Aligned_cols=297 Identities=12% Similarity=0.086 Sum_probs=186.7
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
++...++++++++++|.+++++++|+++++..++..+ .++| |+|++..++|++....+...+......
T Consensus 43 ~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~-----~~~g-----d~Vl~~~~~~~~~~~~~~~~g~~~~~v-- 110 (361)
T cd06452 43 KPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSL-----CEKG-----DWVVVDGLAHYTSYVAAERAGLNVREV-- 110 (361)
T ss_pred CchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEEcCCcchHHHHHHHhcCCEEEEE--
Confidence 4668899999999999999999999999999999887 5667 999999888655443222222111110
Q ss_pred CCCCCCCceeccCCCHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 100 FGPLLPGHLKVDFGDITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 100 ~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
+...+.. . ..|++++++++++.. ++++++++++++|++|...+ +++|.++|+++|+++|+|++|+ ++
T Consensus 111 --~~~~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g 181 (361)
T cd06452 111 --PNTGHPE-Y-HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VG 181 (361)
T ss_pred --ecCCCCC-c-ccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cC
Confidence 1000000 0 127899998887421 36889999888888998887 9999999999999999999997 21
Q ss_pred ccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCCCC-----CC---CCCHHHHHHHHHHHHHHhh
Q 017259 176 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----TF---GGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~aa~~al~~~~~ 247 (374)
. ..+....++.+..+.|++|+++++. |+|++++++++.+.+....... ++ ......+.++.++++.+.+
T Consensus 182 ~--~~~~~~~~~~d~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 258 (361)
T cd06452 182 R--MPVSGKELGADFIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKE 258 (361)
T ss_pred C--cCCCHHHcCCCEEEecCCccccCCC-CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHH
Confidence 1 1122222233223447889998877 9999999998888875432110 10 1111234444555554322
Q ss_pred h-cHHHHHHHHHHHHHHHHHHHHHhCCCceee--EEEEeeeEEEEeccCC-----CchhHHHHHHHHHHCCeEecc-CCC
Q 017259 248 E-KLAERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKP-THD 318 (374)
Q Consensus 248 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gi~v~~-~~~ 318 (374)
. +...+..++.+++++.|+++ +++... ..+..+++.+..+... ......++.++|+++||.+.. +..
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~l----~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~ 334 (361)
T cd06452 259 RVKRWDEEVEKARWFVAELEKI----EGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLT 334 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcCCCc
Confidence 1 11222223345666666544 222110 1234445555443110 001234799999999999754 335
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 319 TIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 319 ~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
..+|++.. ..++++++.++++|+++.
T Consensus 335 ~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 335 RYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred eEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 68899842 369999999999998765
No 224
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.91 E-value=4.7e-22 Score=186.30 Aligned_cols=296 Identities=13% Similarity=0.105 Sum_probs=195.8
Q ss_pred CcHHHHHHHHhcccCCC----eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccc--ccccccCCc
Q 017259 21 DKFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL--AAISMSCDN 94 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~----~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~ 94 (374)
+.++++++.+++++|.+ .+++++||+++++.++..+ ..+| +++++..++|++... .+...+...
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l-----~~~~-----~~vlv~~~~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL-----VPRD-----GKVLVPDNGAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc-----cCCC-----CeEEEEeCCchHHHHHHHHHHcCCcE
Confidence 46778888899888653 4789999999999999988 3455 788887777666531 111111111
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. .+...+ ...|+++++++++++ ++++++++.++++++|...+ +++|.++|+++|+++|+|++++ +
T Consensus 107 ~~----i~~~~~----~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~~livDa~~~-~ 172 (368)
T PRK13479 107 VV----LDTGED----EPPDAAEVEAALAAD-PRITHVALVHCETTTGILNP----LDEIAAVAKRHGKRLIVDAMSS-F 172 (368)
T ss_pred EE----EECCCC----CCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccC----HHHHHHHHHHcCCEEEEEcccc-c
Confidence 10 010000 012789999988754 45677888888889999998 9999999999999999997764 5
Q ss_pred cccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCC-----------------CCCCCCCCHHHH
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------HGSTFGGNPLAS 235 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 235 (374)
+. ..+.. ..+.+|++ +++|++.|+. ++|++++++++.+.+.... ....|+.+..++
T Consensus 173 g~--~~~~~--~~~~~d~~v~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 247 (368)
T PRK13479 173 GA--IPIDI--AELGIDALISSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVV 247 (368)
T ss_pred CC--ccccc--cccCceEEEecCccccccCC-CceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHH
Confidence 32 12222 22345654 6669988766 6799999998877765431 111246677777
Q ss_pred HHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCe
Q 017259 236 AVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 311 (374)
Q Consensus 236 ~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 311 (374)
.++.++++.+.++ +..++++++++++++.|++++... ........+....+.++... ..+..++.+.|.++||
T Consensus 248 ~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi 324 (368)
T PRK13479 248 AAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEP--LLDAEIQSPIIVTFHAPADP-AYDFKEFYERLKEQGF 324 (368)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCchhcCceEEEEECCCCC-CcCHHHHHHHHHHCCE
Confidence 7777788766443 344566667777777776653211 11111112223444343321 0146789999999999
Q ss_pred EeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 312 LAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 312 ~v~~~~---~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.++++. .+++|++....++++|+++++++|+++++ ++
T Consensus 325 ~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~-~~ 364 (368)
T PRK13479 325 VIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALY-WM 364 (368)
T ss_pred EEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 998753 35899986556799999999999999998 54
No 225
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=8.6e-23 Score=188.65 Aligned_cols=290 Identities=15% Similarity=0.133 Sum_probs=187.9
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc-ccccCCcccc
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCDNEAI 97 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~ 97 (374)
+.+.+.+|++.|++++|.+.+++++||++++..++.++ ..+| |+|++..++|....... ....+. ..
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~-----~~~g-----d~vi~~~~~~~~~~~~~~~~~~~~--~~ 99 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSH-----CERG-----EEYIVGQAAHNYLYEAGGAAVLGS--IQ 99 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHh-----cCCC-----CeeEEechhhhhHhcCCchHHhcC--ce
Confidence 67889999999999999999999999999988888766 5567 88888877753221110 111110 00
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
....+...+. ..|++++++++.++. .+++++++++++ +|.+. +.+.+++|.++|++|+++|++||+|. +
T Consensus 100 ~~~~~~~~~~----~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~ 171 (333)
T PRK10534 100 PQPIDAAADG----TLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-F 171 (333)
T ss_pred EEeecCCCCC----CCCHHHHHHhhcccCcCcccceEEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-H
Confidence 0000100111 127899988886310 157888887543 47777 78899999999999999999999987 3
Q ss_pred ccc---ccCcccccCCCCC-cEEEecccccCCccchh-hheeCHHHHhhcCCCCCCC--CCCCCHHHHHHHHHHHHHHhh
Q 017259 175 ARS---GRMLASDWEEVRP-DMVILGKALGGGVIPVS-AVLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 175 ~~~---g~~~~~~~~~~~~-d~~s~sK~~~~G~~~~G-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~al~~~~~ 247 (374)
... +.... ......+ -+++|||+++ + ++| |+++++++++.++...... .+..+.++++++.++++..
T Consensus 172 ~~~~~~~~~~~-~~~~~~~~~~~s~SK~~~--~-~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~-- 245 (333)
T PRK10534 172 NAVVAYGCELK-EITQYCDSFTICLSKGLG--T-PVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN-- 245 (333)
T ss_pred HHHHHcCCCHH-HHHhcCCEEEEEeEcCCC--C-cccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--
Confidence 111 11110 1111112 2458999876 3 467 4778888888876432211 2233445666666666532
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCC
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPL 327 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~ 327 (374)
.+..++..+.++++.+.|++++ +. ..++.++|+++.++.. ...++.+.|.++||.++++. .+|++...
T Consensus 246 ~~~~~~~~~~r~~l~~~L~~~g-----~~-~~~~~~nfv~~~~~~~----~~~~~~~~l~~~gi~v~~~~--~~rl~~~~ 313 (333)
T PRK10534 246 VARLQEDHDNAAWLAEQLREAG-----AD-VMRQDTNMLFVRVGEE----QAAALGEYMRERNVLINASP--IVRLVTHL 313 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-----Cc-cCCCCceEEEEECCch----hHHHHHHHHHHcCeeecCCc--eEEEEEEe
Confidence 2334444455667777777652 21 1223577888777532 46788999999999998873 68998655
Q ss_pred CCCHHHHHHHHHHHHHHHh
Q 017259 328 SISSNELQEGSKALHDVLE 346 (374)
Q Consensus 328 ~~~~e~i~~~~~~l~~~~~ 346 (374)
-.|++++++++++|++++.
T Consensus 314 r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 314 DVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCCHHHHHHHHHHHHHHhc
Confidence 6799999999999997764
No 226
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-22 Score=187.65 Aligned_cols=273 Identities=16% Similarity=0.170 Sum_probs=177.0
Q ss_pred CCCCcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 18 FYNDKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
|+.+...++++.++++++ .+++++|+|+++++..++..+ +| |+|++..|+|..+...+...+....
T Consensus 52 Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-------~g-----d~V~v~~P~y~~~~~~~~~~g~~~~ 119 (337)
T PRK03967 52 YPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-------EG-----KHIVITPPTFGMYSFYAKLNGIPVI 119 (337)
T ss_pred CCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh-------CC-----CeEEEeCCChHHHHHHHHHcCCeEE
Confidence 455567788888888774 568999999999998766543 36 9999999999654433222221111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
.. +...+.. .|++++++.+ ++++++++.+++||+|.+.+ .++|.++++ +++++|+||+|.+|.
T Consensus 120 ~v----~~~~~~~----~d~~~l~~~~----~~~~~v~~~~P~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~ 182 (337)
T PRK03967 120 DV----PLKEDFT----IDGERIAEKA----KNASAVFICSPNNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFS 182 (337)
T ss_pred Ee----ecCCCCC----cCHHHHHHhc----cCCCEEEEeCCCCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhc
Confidence 00 1100000 2677777654 35677778788999999886 667777774 799999999999774
Q ss_pred ccccCcccccCCCCCcE---EEeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHH
Q 017259 176 RSGRMLASDWEEVRPDM---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 251 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~---~s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~ 251 (374)
.. .. . ......+++ .||||.++ +|+ |+||+++++++++.+.... ..++.+.+++.++..+++. .++.
T Consensus 183 ~~-~~-~-~~~~~~~~vi~l~S~SK~~~l~Gl-RiG~iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~---~~~~ 253 (337)
T PRK03967 183 GK-SL-I-GLIDEYPNLILLRTFSKAFGLAGI-RAGYAIANEEIIDALYRIK--PPFSLNILTMKIVRLALDH---YDLI 253 (337)
T ss_pred cc-ch-H-HHHhhCCCEEEEecchHhhcchhh-hheeeecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhC---HHHH
Confidence 21 11 1 111122333 38999999 899 9999999999888887543 3456788888888877752 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC---CCEEEEecCCC
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLS 328 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~~~lRi~~~~~ 328 (374)
.+..+.....++.+.+..... ..++.+.++|+.+ .+.+.|.++||.+++.. .+++||+ .
T Consensus 254 ~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~----------~~~~~l~~~gi~v~~~~~~~~~~~Ri~---~ 315 (337)
T PRK03967 254 EERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL----------DAYDYLLENGIVVRKLSGRLEGHIRVT---V 315 (337)
T ss_pred HHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH----------HHHHHHHHCCEEEEeCCCCCCCeEEEe---c
Confidence 211111122222232222221 1234567777532 26788999999997652 5799999 4
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 017259 329 ISSNELQEGSKALHDVLE 346 (374)
Q Consensus 329 ~~~e~i~~~~~~l~~~~~ 346 (374)
.+.++.++++++|+.+.+
T Consensus 316 ~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 316 GKREENDEFIKALKEIKE 333 (337)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 467888999999988876
No 227
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=3.9e-22 Score=188.32 Aligned_cols=309 Identities=17% Similarity=0.123 Sum_probs=213.4
Q ss_pred hHHHHHHHhcc-ccCcCCCCCcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEec
Q 017259 2 KALQEQAEKLT-LSSRAFYNDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCC 77 (374)
Q Consensus 2 ~a~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~ 77 (374)
+++.+++.+.. +..+....+.+++++++++++++.+ .+++++||+++++.++..+ .++| |+|++.+
T Consensus 22 ~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~-----~~~G-----d~Vlv~~ 91 (401)
T PLN02409 22 ERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT-----LSPG-----DKVVSFR 91 (401)
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc-----CCCC-----CEEEEeC
Confidence 34555554422 2122233566778888888887543 5899999999999888776 5677 9999999
Q ss_pred cCCCCcccccc-cccCCccccccCCCCCCCceeccC-----CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhH
Q 017259 78 GCFHGRTLAAI-SMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY 150 (374)
Q Consensus 78 ~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~ 150 (374)
+.|++...... ...+ ..+..++. .|+++++++++..+ +++++++++++.+++|.+.+
T Consensus 92 ~~~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~---- 155 (401)
T PLN02409 92 IGQFSLLWIDQMQRLN------------FDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND---- 155 (401)
T ss_pred CCchhHHHHHHHHHcC------------CceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----
Confidence 88766432111 1111 11111111 26899999998532 37899999999999999998
Q ss_pred HHHHHHH--HHhcCCEEEEeccccCCcccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCC---
Q 017259 151 LKAVRDL--CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--- 223 (374)
Q Consensus 151 l~~l~~l--~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~--- 223 (374)
+++|.++ |+++|+++|+|++++ ++ . ...+...+..|++ +.+|+++++. ++|+++.++++.+.+.+..
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~v~s-~g---~-~~id~~~~~~D~~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~ 229 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDGVSS-IG---A-LDFRMDEWGVDVALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPR 229 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEcccc-cC---C-ccccccccCccEEEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCC
Confidence 9999999 999999999999997 32 1 1222223345655 5569999877 8899999988877765321
Q ss_pred -------------CC-C-CCCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCcee--eEEEEe
Q 017259 224 -------------HG-S-TFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK--EVRGRG 283 (374)
Q Consensus 224 -------------~~-~-~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~g 283 (374)
.+ . .++++...+.+..++++.+.+. ++.++.+++.+++++.|++++.. ... .....+
T Consensus 230 ~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~---~~~~~~~~~s~ 306 (401)
T PLN02409 230 VFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLK---LCTKKPEWRSD 306 (401)
T ss_pred eecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCe---eccCChhhccc
Confidence 00 1 3456777788888888886543 56677777888888877765322 111 112234
Q ss_pred eeEEEEeccCCCchhHHHHHHHHH-HCCeEeccC----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 284 LFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+.++.++... +..++.+.|. +.||.+..+ .+..|||+....++.+++..++++|.++++ ++
T Consensus 307 ~v~~~~~p~~~---~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~-~~ 373 (401)
T PLN02409 307 TVTAVVVPEGI---DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLK-DV 373 (401)
T ss_pred ceEEEeCCCCC---CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 55667666544 6778888886 559999875 257899998888999999999999999998 65
No 228
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=2.3e-22 Score=182.67 Aligned_cols=303 Identities=17% Similarity=0.227 Sum_probs=214.8
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.++.++.+. .+...+++++++++.|..+++.++|||.|+.++++++. +.+| |+||+++-+|.
T Consensus 19 ~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~----ig~G-----DeVI~ps~Tfv 85 (374)
T COG0399 19 AAVQEVLKSGWLTG----GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA----IGPG-----DEVIVPSFTFV 85 (374)
T ss_pred HHHHHHHHcCCeec----ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcC----CCCC-----CEEEecCCchH
Confidence 56667777666654 67888999999999999999999999999999999885 6788 99999988874
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
.. .+.....+..|++.|+....++ |++.+|++|+ ++|++|+..+.. |..++ +++|.++|++
T Consensus 86 AT--------an~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt---~~tKAIipVhl~---G~~~d----m~~i~~la~~ 147 (374)
T COG0399 86 AT--------ANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAIT---PRTKAIIPVHLA---GQPCD----MDAIMALAKR 147 (374)
T ss_pred HH--------HHHHHHcCCeEEEEecCCcccCCCHHHHHHHcc---cCCeEEEEehhc---cCCCC----HHHHHHHHHH
Confidence 33 3334445555666677766665 8999999999 569999998887 44455 9999999999
Q ss_pred cCCEEEEecccc-CCcccccCcccccCCCCCcEEEec----ccccCCccchhhheeC-HHHHhhcCCC------------
Q 017259 161 YNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPG------------ 222 (374)
Q Consensus 161 ~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~-~~~~~~~~~~------------ 222 (374)
||++||+|.+|+ |-.+.|+ ..|-..|+.+|| |.++.|- +|.++.+ +++.++++..
T Consensus 148 ~~l~vIEDaAqa~Ga~y~gk-----~vGt~Gd~~~fSF~~~K~ittgE--GGav~tnd~ela~k~~~lr~hG~~~~~~~~ 220 (374)
T COG0399 148 HGLPVIEDAAQAHGATYKGK-----KVGSFGDIGAFSFHATKNLTTGE--GGAVVTNDEELAEKARSLRNHGLSRDAVFK 220 (374)
T ss_pred cCCeEEEEcchhccCeecCc-----ccccccceEEEEecCCCCccccC--ceEEEeCCHHHHHHHHHHHHhCcCCCcccc
Confidence 999999999998 3333333 223344666666 8888553 3445554 5666665421
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHH-HhCCCceeeEEEEeeeEEEEeccCCCch
Q 017259 223 ----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ-QQFPNYVKEVRGRGLFNAVEFDKTALPV 297 (374)
Q Consensus 223 ----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 297 (374)
..+++|-.+.+.++.+++.|+.+ +++.++.++..+++.+.|+.+. ..+|.........-.++.+.++.. +.
T Consensus 221 y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~--~~ 296 (374)
T COG0399 221 YLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE--GI 296 (374)
T ss_pred ceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC--CC
Confidence 13445666777777788777765 4567778888888888887653 222211222222233444444443 22
Q ss_pred hHHHHHHHHHHCCe----EeccCC-----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 298 SAYDICLKMKERGI----LAKPTH-----------------------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi----~v~~~~-----------------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+.+.+.|.++|| +.+|.+ ...+++-+...++++++++++++|++++.
T Consensus 297 ~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 297 SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 68899999999954 444411 35677777778999999999999999886
No 229
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.91 E-value=1.4e-22 Score=193.14 Aligned_cols=290 Identities=13% Similarity=0.156 Sum_probs=197.1
Q ss_pred HHHHHHHHhcccCC---CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 23 FPVFAERLTSMFGY---DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 23 ~~~l~~~l~~~~~~---~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
++++.+.++++++. +++++++|++++++.++..+... ..++| ++|++..+.|++.......+....+
T Consensus 78 ~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~-~~~~g-----d~vl~~~~~~~s~~~~~~~~a~~~g---- 147 (424)
T PLN02855 78 YELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLA-NLKPG-----DEVILSVAEHHSNIVPWQLVAQKTG---- 147 (424)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhh-cCCCc-----CEEEECCCccHHHHHHHHHHHHHcC----
Confidence 56788899998864 48999999999999888764210 14566 8999999887654333222111001
Q ss_pred CCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 100 FGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 100 ~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
..+..++. .|++++++.++ +++++++++.++|++|.+.+ +++|.++|+++|+++++|++|+ +
T Consensus 148 -----~~v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~ 214 (424)
T PLN02855 148 -----AVLKFVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-V 214 (424)
T ss_pred -----CEEEEEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-c
Confidence 11111111 27889998886 57899999999999999998 9999999999999999999996 2
Q ss_pred cccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCC---------------------CCCCC
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGGN 231 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~---------------------~~~~~ 231 (374)
+.. .++.....+|++ +++| +.|+. ++|+++.++++.+.+.+...+. ..+.+
T Consensus 215 g~~----~~~~~~~~~d~~~~s~~K-~~gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~ 288 (424)
T PLN02855 215 PHM----PVDVQTLGADFLVASSHK-MCGPT-GIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPA 288 (424)
T ss_pred CCc----CCCchhcCCCEEEeeccc-ccCCC-ccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChH
Confidence 211 122223445765 6669 44444 6789999988877765431110 11235
Q ss_pred HHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceee------EEEEeeeEEEEeccCCCchhHHHH
Q 017259 232 PLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKE------VRGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 232 ~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
..+.+++.++++.+.+. .+.++.++..+++++.|+++ +++... ...++.++.|.++.. ...++
T Consensus 289 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~----~g~~i~~~~~~~~~~r~~~v~~~~~~~----~~~~v 360 (424)
T PLN02855 289 IGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV----PGVRIYGPKPSEGVGRAALCAFNVEGI----HPTDL 360 (424)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCcccccCcccEEEEEECCc----CHHHH
Confidence 55666677777766442 45566666666666666543 222111 112356777777643 57789
Q ss_pred HHHHHHC-CeEeccCC------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 303 CLKMKER-GILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 303 ~~~l~~~-Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+.|.++ ||.++.+. ++++|++++..+|++|++++++.|+++++ .++
T Consensus 361 ~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~-~~~ 420 (424)
T PLN02855 361 STFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIA-FFS 420 (424)
T ss_pred HHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHH-HHH
Confidence 9999887 99998542 46899999999999999999999999987 653
No 230
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.91 E-value=5.4e-22 Score=174.71 Aligned_cols=307 Identities=19% Similarity=0.266 Sum_probs=224.9
Q ss_pred hHHHHHHHhccc-cC---c-CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTL-SS---R-AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~-~~---~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+||.+.+++... .+ + .+.+....+|+++|+++.+.+..++.+|+--|++..+..+.+ ..+| .+|...
T Consensus 192 ~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak---~lpg-----cei~SD 263 (570)
T KOG1360|consen 192 DAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAK---KLPG-----CEIFSD 263 (570)
T ss_pred HHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHH---HCCC-----cEEecc
Confidence 577777776322 11 1 266788999999999999999999999999999999988854 4456 666655
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
++. |..-...+- --...-..+.+||++.|++.|++.+ +.++.|-+|+++++.|.++| +++|+
T Consensus 264 ~gN-HASMI~GIr------------ns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelc 326 (570)
T KOG1360|consen 264 EGN-HASMIQGIR------------NSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELC 326 (570)
T ss_pred ccc-hHHHHHHhh------------hcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHH
Confidence 554 433211111 1112344567789999999999865 45899999999999999999 99999
Q ss_pred HHHHhcCCEEEEecccc-C-CcccccCcccccCCC--CCcEE--Eeccccc--CCccchhhheeCHHHHhhcCCCCCCCC
Q 017259 156 DLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGST 227 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~--~G~~~~G~~~~~~~~~~~~~~~~~~~~ 227 (374)
+++++||.+-.+||+|+ | +|..|.. ..+..|+ ..|++ +++|++| || |+.+...+.+.++....+..
T Consensus 327 Dvah~yGAiTFlDEVHAVGlYG~rGaG-vgerdGvm~kvDiIsGTLgKafGcVGG-----YIAat~~LvDmiRSyAaGFI 400 (570)
T KOG1360|consen 327 DVAHKYGAITFLDEVHAVGLYGPRGAG-VGERDGVMHKVDIISGTLGKAFGCVGG-----YIAATRKLVDMIRSYAAGFI 400 (570)
T ss_pred HHHHHhCceeeeehhhhhccccCCCCC-ccccCCcchhhhhcccchhhhcccccc-----eehhhhhHHHHHHHhcCceE
Confidence 99999999999999998 5 3444443 2233444 33555 7889998 44 48888899999887766655
Q ss_pred C--CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHH
Q 017259 228 F--GGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 228 ~--~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
| +.++..++.++++.+++..+ .+++..+++.+++++.|.+++ +| + .+...+++-+.+.+.. ...++
T Consensus 401 FTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G--iP-V---i~~pSHIiPv~vgda~---l~~~~ 471 (570)
T KOG1360|consen 401 FTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG--IP-V---IPNPSHIIPVRVGDAA---LAKQA 471 (570)
T ss_pred EecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC--Cc-c---cCCCcceeeeeccCHH---HHHHH
Confidence 4 66888899999999988664 455666667777777777664 22 2 1223455555554433 57788
Q ss_pred HHHHHH-CCeEecc-------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 303 CLKMKE-RGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 303 ~~~l~~-~Gi~v~~-------~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++.|++ .||++.. .+..-+||+|...+|++-++.+++.|..+++ ++
T Consensus 472 sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~-~v 525 (570)
T KOG1360|consen 472 SDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWN-EV 525 (570)
T ss_pred HHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence 998885 4898842 3567899999999999999999999999998 54
No 231
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-21 Score=174.05 Aligned_cols=304 Identities=15% Similarity=0.170 Sum_probs=209.0
Q ss_pred CCCcHHHHHHHHhcccC--------CC-eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccc
Q 017259 19 YNDKFPVFAERLTSMFG--------YD-MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 89 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~--------~~-~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~ 89 (374)
.+...-+|...+.+..+ .+ .++.|+|.+.+++.+++++ +++| |.|++..++|.+......+
T Consensus 98 ~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~-----~N~g-----d~vlie~~ty~~AL~s~~a 167 (472)
T KOG0634|consen 98 QSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL-----INRG-----DHVLIEEYTYPSALQSMEA 167 (472)
T ss_pred cccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh-----hcCC-----CceEEecccchHHHHhccc
Confidence 34444455555555432 12 6899999999999999999 6777 9999999999765544443
Q ss_pred ccCCccccccCCCCCCCceeccCC----CHHHHHHHHHhcC------CcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH
Q 017259 90 MSCDNEAIRGFGPLLPGHLKVDFG----DITALEKIFKESG------DQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLC 158 (374)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~l~~~~------~~~~~vi~~~-~~~~~g~~~~~~~~l~~l~~l~ 158 (374)
.+ ..+..++.+ ++|.|++.+.... +++.++.+-| .+||||+.. +.+..++|.+||
T Consensus 168 ~g-------------v~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LA 233 (472)
T KOG0634|consen 168 LG-------------VKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLA 233 (472)
T ss_pred cC-------------ceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHH
Confidence 33 122222222 6899999988532 4478888887 588888888 899999999999
Q ss_pred HhcCCEEEEeccccCCcccc---c------Ccc---------cccC--CCCCcEE---EecccccCCccchhhheeCHHH
Q 017259 159 SKYNILMIADEIQSGLARSG---R------MLA---------SDWE--EVRPDMV---ILGKALGGGVIPVSAVLADKEV 215 (374)
Q Consensus 159 ~~~~i~li~Dea~~~~~~~g---~------~~~---------~~~~--~~~~d~~---s~sK~~~~G~~~~G~~~~~~~~ 215 (374)
++||++||+||.|.-+.+.. . .+. -... +....++ ||||-+++|+ |+||+.+++.+
T Consensus 234 rKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGl-RlG~it~~~~~ 312 (472)
T KOG0634|consen 234 RKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGL-RLGWITGNSLF 312 (472)
T ss_pred HHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcc-eeEEeecCHHH
Confidence 99999999999997432221 0 001 0111 1122233 9999999999 99999999988
Q ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH----HHHHHHhCCCcee--eEEEEeeeEEEE
Q 017259 216 MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH----LFKIQQQFPNYVK--EVRGRGLFNAVE 289 (374)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~--~~~~~g~~~~~~ 289 (374)
++++.......+.+++.+.+...-+.++.+..+++.+.+++.+..+.++ +..+...+|..+. ..+..|.|+|+.
T Consensus 313 l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~ 392 (472)
T KOG0634|consen 313 LKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVE 392 (472)
T ss_pred HHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEE
Confidence 8888766666677788899998888898888775555555544433333 2333334454322 345569999999
Q ss_pred ec-------cCCCchhHHHHHHHHHHCCeEeccCC-----------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 290 FD-------KTALPVSAYDICLKMKERGILAKPTH-----------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 290 ~~-------~~~~~~~~~~~~~~l~~~Gi~v~~~~-----------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
++ +.- .+-.+.+...+.++||.+.++. +-++|+++++. +.|+++++++++..+++ +..
T Consensus 393 i~~~~~~~~~~i-~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ik-e~f 468 (472)
T KOG0634|consen 393 IPYINFDTKKSI-NQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIK-EHF 468 (472)
T ss_pred ecccccccccch-HHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHH-HHh
Confidence 86 211 1123345556778899887752 23999997755 67799999999999998 543
No 232
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=4.2e-21 Score=182.76 Aligned_cols=316 Identities=16% Similarity=0.145 Sum_probs=203.0
Q ss_pred CCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 18 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
..++...+|++.++++++.+++++|+||++|+..++.++ +++| | |++.+|+|..+.......++.+...
T Consensus 75 ~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~al-----l~pG-----D-Vii~~p~~~~~~~~i~~~G~~~v~v 143 (460)
T PRK13238 75 AGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVL-----IKKG-----D-VVPSNYHFDTTRAHIELNGATAVDL 143 (460)
T ss_pred CCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHh-----CCCC-----C-EEccCCcccchHHHHHHcCCEEEEE
Confidence 346788999999999999999999999999999998877 6777 8 8888888765543333333333222
Q ss_pred ccCCCCCCCceeccC---CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 98 RGFGPLLPGHLKVDF---GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~---~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
..-...... ..-++ -|+++|++.++.++ ++++++++++++|++|+.+.+.+.+++|.++|++||++||+|+++..
T Consensus 144 ~~~~~~~~~-~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~ 222 (460)
T PRK13238 144 VIDEALDTG-SRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFA 222 (460)
T ss_pred ecccccccc-ccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchh
Confidence 110000000 00011 28999999998653 47999999999999886666899999999999999999999998851
Q ss_pred ----Cccc---cc-Ccccc-c---CCCCCcEEEec--ccccCCccchhhheeC-HHHHhhcCCCC---C-CCCCCCCHHH
Q 017259 174 ----LARS---GR-MLASD-W---EEVRPDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGE---H-GSTFGGNPLA 234 (374)
Q Consensus 174 ----~~~~---g~-~~~~~-~---~~~~~d~~s~s--K~~~~G~~~~G~~~~~-~~~~~~~~~~~---~-~~~~~~~~~~ 234 (374)
|... +. ..... . ..-..|+.++| |...++. +|+++.+ +++++.++... . ..+|++....
T Consensus 223 e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~--GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~ 300 (460)
T PRK13238 223 ENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNI--GGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGR 300 (460)
T ss_pred hhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcc--eeEEEcChHHHHHHhhhcccccCCcccccCcHHH
Confidence 1110 10 10100 0 01124666666 3222211 2445556 57888876542 2 3367775555
Q ss_pred -HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----chhHHHHHHHHH-
Q 017259 235 -SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMK- 307 (374)
Q Consensus 235 -~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~- 307 (374)
+.|+..+++...++++.+...++++++.+.|++.+ +....+..|+++++++..... +....+++..|.
T Consensus 301 ~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~G-----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~ 375 (460)
T PRK13238 301 DMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEAG-----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYL 375 (460)
T ss_pred HHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHCC-----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHH
Confidence 55555566654455566666666788888887642 222233445666666643210 113467888877
Q ss_pred HCCeEeccCC-----------------CCEEEEecCC-CCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 308 ERGILAKPTH-----------------DTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 308 ~~Gi~v~~~~-----------------~~~lRi~~~~-~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
+.||.+.|.+ .+.+|++++. ..+.++++.+.++|+.+.+ ....+.
T Consensus 376 e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~-~~~~~~ 438 (460)
T PRK13238 376 EAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE-NRESIK 438 (460)
T ss_pred HcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH-hHhhcC
Confidence 5599886632 4799998663 4499999999999999886 444433
No 233
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-21 Score=173.50 Aligned_cols=292 Identities=16% Similarity=0.142 Sum_probs=199.5
Q ss_pred CCcHHHHHHHHhccc------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMF------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
....+++++-+.++. .+++++.++|++.|++..+..+ ..+| |..+++.|.|.|.......-++
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcL-----adpg-----dafLvPtPyY~gfdrdl~~rTg- 192 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCL-----ADPG-----DAFLVPTPYYPGFDRDLRWRTG- 192 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHh-----cCCC-----ceeeecCCCCCcccccceeccC-
Confidence 444555666555543 4678999999999999888877 5677 9999999999887555444433
Q ss_pred ccccccCCCCCCCceeccC--C-------CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 94 NEAIRGFGPLLPGHLKVDF--G-------DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~--~-------d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
+..+|+ . +.+++|+++++ .+.+++++++.+++||-|... +++.+..+.+++.++
T Consensus 193 -------------veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~-~~e~L~~ll~Fa~~k 258 (471)
T KOG0256|consen 193 -------------VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTL-SPEELISLLNFASRK 258 (471)
T ss_pred -------------ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCcc-CHHHHHHHHHHHhhc
Confidence 222222 1 58889988885 346899999999999999888 899999999999999
Q ss_pred CCEEEEeccccCCcccccCccc--cc---CCCCCc----EEEeccccc-CCccchhhhee-CHHHHhhcCCCCCCCCCCC
Q 017259 162 NILMIADEIQSGLARSGRMLAS--DW---EEVRPD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGG 230 (374)
Q Consensus 162 ~i~li~Dea~~~~~~~g~~~~~--~~---~~~~~d----~~s~sK~~~-~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~ 230 (374)
+|.+|+||+|++-.+....|.. +. ....+| +.++||-+| +|+ |.|.+.. ++.+..+.+.... -+..
T Consensus 259 niHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGf-RvGviYS~ne~VvsaA~kmss--f~~v 335 (471)
T KOG0256|consen 259 NIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGF-RVGVIYSNNEDVVSAATKMSS--FGLV 335 (471)
T ss_pred ceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCce-EEEEEEecChHHHHHHHHHhh--ccCC
Confidence 9999999999962222222221 11 112444 349999999 799 9999886 5566666654222 2233
Q ss_pred CHHHHHHHHHHHHH--Hhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---chhHHHH
Q 017259 231 NPLASAVAIASLDV--IRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDI 302 (374)
Q Consensus 231 ~~~~~~aa~~al~~--~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~ 302 (374)
++..|.-+...|.. +.+. +-.++++.+.+++.+.|+++ ++..-....|.|+|+++..--. .+...++
T Consensus 336 Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-----gI~cl~s~AGlF~wvDlr~lL~s~tfe~El~L 410 (471)
T KOG0256|consen 336 SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-----GIPCLKSNAGLFCWVDLRKLLTSLTFEGELEL 410 (471)
T ss_pred cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-----CCceeecCCeeEEEEEhHHhcCcCChHHHHHH
Confidence 55555544444332 1111 23456666667777777766 3444456679999998744211 1234567
Q ss_pred HHHHHHC-CeEeccCC------CCEEEEecCCCCCHH-HHHHHHHHHHHHHh
Q 017259 303 CLKMKER-GILAKPTH------DTIVRLTPPLSISSN-ELQEGSKALHDVLE 346 (374)
Q Consensus 303 ~~~l~~~-Gi~v~~~~------~~~lRi~~~~~~~~e-~i~~~~~~l~~~~~ 346 (374)
.+.++++ ++.++|+. ++|+|++ +++..+ .++-++++|+..+.
T Consensus 411 w~~i~~~vklnlSpG~s~~C~EpGWFRvc--FAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 411 WERILDNVKLNLSPGSSCHCHEPGWFRVC--FANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHhhccccCCCCcceecCCCeEEEE--eccCCHHHHHHHHHHHHHHHH
Confidence 7777777 99999873 8999999 445444 45559999998886
No 234
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.90 E-value=3.2e-22 Score=180.05 Aligned_cols=298 Identities=17% Similarity=0.216 Sum_probs=207.1
Q ss_pred CcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcc-cccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWG-YVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~-~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
...++-++++++..|. ++|+||+||||++++|++.+.... ..++| .+||+..-..+.....+..+ ...++.
T Consensus 44 ~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~-----~HIIts~iEH~aVl~~~~~L-e~~g~~ 117 (386)
T COG1104 44 KAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG-----KHIITSAIEHPAVLNTCRYL-ERQGFE 117 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC-----CeEEEcccccHHHHHHHHHH-HhcCCe
Confidence 3455677788887754 589999999999999999753221 12234 88888877755544444444 222222
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 177 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~ 177 (374)
..+-|...+... |+++|+++|+ ++|.+|-+...+|.+|.+.| +++|.++|+++++++++|.+|+ +|+
T Consensus 118 Vtyl~V~~~G~v----~~e~L~~al~---~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gk- 184 (386)
T COG1104 118 VTYLPVDSNGLV----DLEQLEEALR---PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGK- 184 (386)
T ss_pred EEEeCCCCCCeE----cHHHHHHhcC---CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCc-
Confidence 222222222222 8999999998 68999999999999999999 9999999999999999999997 432
Q ss_pred ccCcccccCCCCCcEEEecc-cccCCccchhhheeCHHHHhhcCCCCCCCC-------CCCCHHHHHHHHHHHHHHhhh-
Q 017259 178 GRMLASDWEEVRPDMVILGK-ALGGGVIPVSAVLADKEVMLCIQPGEHGST-------FGGNPLASAVAIASLDVIRDE- 248 (374)
Q Consensus 178 g~~~~~~~~~~~~d~~s~sK-~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~aa~~al~~~~~~- 248 (374)
...+......|++|||- .++|.- ++|+++.++.+ .+.+..++.. -+.|..+.++...|++...++
T Consensus 185 ---ipi~~~~~~vD~ls~SaHK~~Gpk-GiGaLyv~~~~--~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~ 258 (386)
T COG1104 185 ---IPIDLEELGVDLLSFSAHKFGGPK-GIGALYVRPGV--RLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEEL 258 (386)
T ss_pred ---eeccccccCcceEEeehhhccCCC-ceEEEEECCCC--ccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 23344444579999983 355544 67888776543 3333222221 233666666666666654332
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCce--ee-EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-------
Q 017259 249 -KLAERSAHLGEELRQHLFKIQQQFPNYV--KE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------- 317 (374)
Q Consensus 249 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------- 317 (374)
....+++..++++.+.|++.. |.+. .. .+..++.+.+.++.- .++.+.-.|..+||.++.+.
T Consensus 259 ~~~~~~~~~lr~~l~~~l~~~~---p~~~~~g~~~~rlP~~~~~~f~gv----~gE~ll~~L~~~gI~vStGSACsS~~~ 331 (386)
T COG1104 259 EEENARLRKLRDRLEDGLLEII---PDVYLNGDDEPRLPNILNFSFPGV----EGESLLLALDLAGIAVSTGSACSSGSL 331 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---CcEEEcCCcccCCCCeEEEEeCCC----cHHHHHHhccccCeEEeccccccCCCC
Confidence 456777777888888777652 2221 11 244577777777765 68888888888999997641
Q ss_pred ----------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCc
Q 017259 318 ----------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 351 (374)
Q Consensus 318 ----------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 351 (374)
.+.+||+++..++++|++++++.|.++++ .++.
T Consensus 332 ~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~-~lr~ 380 (386)
T COG1104 332 EPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIK-RLRE 380 (386)
T ss_pred CccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHH-HHhh
Confidence 48999999999999999999999999998 7644
No 235
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.90 E-value=5.1e-22 Score=187.98 Aligned_cols=291 Identities=11% Similarity=0.043 Sum_probs=184.4
Q ss_pred CcHHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
+..+++++.+++++|.+ ++++++|+++++..++..+... .++| |+|++.++.|++............+...
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~--~~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g~~~ 132 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRR--WGPG-----DEVIVTRLDHEANISPWLQAAERAGAKV 132 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhc--CCCC-----CEEEEcCCchHhHHHHHHHHHHhcCCEE
Confidence 34678999999988653 6999999999998777766321 4567 9999999887654322211100001100
Q ss_pred cCCCCCC-CceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc
Q 017259 99 GFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 177 (374)
Q Consensus 99 ~~~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~ 177 (374)
.+.+... +. ..|+++++++++ +++++++++.++|++|.+.+ +++|.++|++||+++|+|++|+ .+
T Consensus 133 ~~~~~~~~~~----~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~-- 198 (397)
T TIGR01976 133 KWARVDEATG----ELHPDDLASLLS---PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-AP-- 198 (397)
T ss_pred EEEeccccCC----CcCHHHHHHhcC---CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cc--
Confidence 0001100 00 026889988886 57899999999999999998 9999999999999999999986 21
Q ss_pred ccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCC----------CCCCHHHHHHHHHHHHHH
Q 017259 178 GRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST----------FGGNPLASAVAIASLDVI 245 (374)
Q Consensus 178 g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~aa~~al~~~ 245 (374)
.. ..+.....+|++ |++|.+| . ++|++++++++.+.+.+...... .+.+....++..++++.+
T Consensus 199 -~~-~~~~~~~~~d~~~~s~~K~~g--~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 273 (397)
T TIGR01976 199 -HG-LIDVQATGADFLTCSAYKFFG--P-HMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYL 273 (397)
T ss_pred -cc-CCCHHHcCCCEEEEechhhcC--C-ceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHH
Confidence 11 112222345655 6679874 5 78899999888877765322111 123444555666666665
Q ss_pred hhhc-------------HHHHHHHHHHHHHHHHHHHHHhCCCcee--e--EEEEeeeEEEEeccCCCchhHHHHHHHHHH
Q 017259 246 RDEK-------------LAERSAHLGEELRQHLFKIQQQFPNYVK--E--VRGRGLFNAVEFDKTALPVSAYDICLKMKE 308 (374)
Q Consensus 246 ~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~--~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (374)
.+.+ ..+.++++...+.+.+.+....++++.. . ....+.++.+.++.. +..++.++|.+
T Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~ 349 (397)
T TIGR01976 274 AGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL----PPQRVVRRLAD 349 (397)
T ss_pred HHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc----CHHHHHHHHHH
Confidence 4322 1233333333333333332222221111 1 112455666655432 57789999999
Q ss_pred CCeEeccC---------------CCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 309 RGILAKPT---------------HDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 309 ~Gi~v~~~---------------~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
+||.++.+ ..+++||+++..+|++|+++++++|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99999864 2468999999999999999999864
No 236
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=3.9e-22 Score=185.39 Aligned_cols=274 Identities=18% Similarity=0.136 Sum_probs=177.0
Q ss_pred CcHHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
....++.+.+++++ ..+++++|+|+++++..+++ +. + +.+++..|+|......+...+.....
T Consensus 58 ~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l~------~------~~viv~~P~y~~~~~~~~~~G~~i~~-- 122 (349)
T PRK07908 58 EDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-LR------P------RRAAVVHPSFTEPEAALRAAGIPVHR-- 122 (349)
T ss_pred cchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-cC------C------CeEEEeCCCChHHHHHHHHcCCEEEe--
Confidence 35667888888876 45689999999999988776 31 1 45667889987655433332211110
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
.+...+.. .|+++ ++ ++++++++.+++||+|.+.+ .++|.++|++ +.++|+||+|+++. .+
T Consensus 123 --v~~~~~~~----~d~~~----l~---~~~~~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~ 183 (349)
T PRK07908 123 --VVLDPPFR----LDPAA----VP---DDADLVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PG 183 (349)
T ss_pred --eccCcccC----cChhH----hc---cCCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cC
Confidence 01100000 13443 33 36788888888999999996 6677888864 78888999998763 23
Q ss_pred cCcccccCCCCCcEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hhcHH
Q 017259 179 RMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLA 251 (374)
Q Consensus 179 ~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~ 251 (374)
.......... ++++ ||||.++ +|+ |+||+++++++++.+..... .+..+++.+.++.+.++... -.+.+
T Consensus 184 ~~~~l~~~~~-~~~i~i~S~SK~~~l~Gl-RiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 259 (349)
T PRK07908 184 EPESLAGDDL-PGVLVLRSLTKTWSLAGL-RVGYALGAPDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADA 259 (349)
T ss_pred CccccccccC-CCEEEEeecccccCCccc-eeeeeecCHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHH
Confidence 3222211111 2332 8899998 899 99999999998888875322 34556666665544443100 01234
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC------CCEEEEec
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTP 325 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~lRi~~ 325 (374)
++++++++++.+.|++. ++....+..+.++|+.+++ ..++.+.|.++||.+.++. .+++||++
T Consensus 260 ~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~~~~~~~~~------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~ 328 (349)
T PRK07908 260 ARLAADRAEMVAGLRAV-----GARVVDPAAAPFVLVRVPD------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV 328 (349)
T ss_pred HHHHHHHHHHHHHHHhC-----CcEeccCCCceEEEEECCc------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe
Confidence 45555555555555543 2222223568888887763 4688889999999998752 57999994
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 017259 326 PLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 326 ~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++++++++++|++++.
T Consensus 329 ---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 329 ---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred ---CCCccHHHHHHHHHHHHh
Confidence 578899999999998875
No 237
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=6.5e-22 Score=184.50 Aligned_cols=303 Identities=16% Similarity=0.137 Sum_probs=201.7
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.+..++.+. ..+...+++++++++++.+++++++||++|+..++.++. .++| |+|+++.++|.
T Consensus 15 ~a~~~~~~~~~~~~---~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~----~~pG-----d~Viv~~~t~~ 82 (376)
T TIGR02379 15 EYIAEAISEGKLSG---DGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLD----IQPG-----DEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHcCCccC---CcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC----CCCc-----CEEEECCCCcH
Confidence 45555555544422 356789999999999999999999999999998887662 5677 99999999987
Q ss_pred CcccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
+........+..+.+. ++..-.+ .|+++++++++ +++++++.+ +++|...+ +++|.++|++
T Consensus 83 ~~~~~~~~~G~~~v~v--------d~d~~~~~~d~~~le~~i~---~~tk~Iip~---~~~G~~~d----~~~I~~la~~ 144 (376)
T TIGR02379 83 STANAFVLRGAKIVFV--------DIRPDTMNIDETLIESAIT---HRTKAIVPV---HYAGVACD----MDTIMALANK 144 (376)
T ss_pred HHHHHHHHcCCEEEEE--------ecCCCcCCCCHHHHHHhcC---cCceEEEEe---CCCCCccC----HHHHHHHHHH
Confidence 6654444333222211 1111111 27888998887 478887643 34677776 9999999999
Q ss_pred cCCEEEEeccccCCc-ccccCcccccCCCCCcEEEec----ccccCCccchhhheeC-HHHHhhcCCCC-----------
Q 017259 161 YNILMIADEIQSGLA-RSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPGE----------- 223 (374)
Q Consensus 161 ~~i~li~Dea~~~~~-~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~-~~~~~~~~~~~----------- 223 (374)
||++||+|++|+... +.|.. .+...|+.+|| |.+..|. ++|+++.+ +++.++++...
T Consensus 145 ~~i~vIeDaa~~~g~~~~~~~-----~g~~~~~~~fSf~~~K~l~~g~-~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 218 (376)
T TIGR02379 145 HQLFVIEDAAQGVMSTYKGRA-----LGSIGHLGTFSFHETKNYTSGG-EGGALLINDQAFIERAEIIREKGTNRSQFFR 218 (376)
T ss_pred CCCEEEEECccccCCccCCcc-----cCCCCCEEEEeCCCCCcCcccC-CceEEEECCHHHHHHHHHHHHhCCCCccccc
Confidence 999999999998321 22221 22333677777 8888776 78887665 67766654211
Q ss_pred ----------CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCceeeEEEEeeeEEEE
Q 017259 224 ----------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVE 289 (374)
Q Consensus 224 ----------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~g~~~~~~ 289 (374)
.+.++-++.+.++.+++.|+.+. ++.++.++..+++.+.|+.+.. .+|...........++++.
T Consensus 219 ~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~--~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (376)
T TIGR02379 219 GEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD--RINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIK 296 (376)
T ss_pred cCCCcceeeeecccCCccHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEE
Confidence 23345557777777777777653 4567777777777787765421 1221111222222344555
Q ss_pred eccCCCchhHHHHHHHHHHCCeEeccC----C----------------------CCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 290 FDKTALPVSAYDICLKMKERGILAKPT----H----------------------DTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~----~----------------------~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
++... +.+++.+.|.++||.++.. + ...+.+-++...+++|+++++++|++
T Consensus 297 ~~~~~---~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~ 373 (376)
T TIGR02379 297 LKDED---DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICD 373 (376)
T ss_pred ECCcC---CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHH
Confidence 55432 5889999999999987621 1 23466666667899999999999987
Q ss_pred HH
Q 017259 344 VL 345 (374)
Q Consensus 344 ~~ 345 (374)
++
T Consensus 374 ~~ 375 (376)
T TIGR02379 374 YL 375 (376)
T ss_pred Hh
Confidence 65
No 238
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.90 E-value=1.3e-21 Score=183.87 Aligned_cols=290 Identities=15% Similarity=0.153 Sum_probs=189.2
Q ss_pred CcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
+...++++.++++++.+ ++++++|++++++.++..+ ..+| ++|++..++|.+.......+....+..
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-----~~~g-----d~vl~~~~~~~~~~~~~~~~~~~~g~~ 113 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-----LKEG-----DHVITTPMEHNSVARPLECLKEQIGVE 113 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-----cCCC-----CEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 55678999999988653 7899999999999888765 5567 999998888655432211111000000
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 177 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~ 177 (374)
....+...+ -..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+ ++..
T Consensus 114 ~~~v~~~~~----~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~ 181 (376)
T TIGR01977 114 ITIVKCDNE----GLISPERIKRAIK---TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVI 181 (376)
T ss_pred EEEEecCCC----CCcCHHHHHHhcC---CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCcc
Confidence 000000000 1127899998886 57889999999999999998 9999999999999999999997 2211
Q ss_pred ccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHH-HhhcCCCCCC----------------CCCCCCHHHHHHH
Q 017259 178 GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEV-MLCIQPGEHG----------------STFGGNPLASAVA 238 (374)
Q Consensus 178 g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~-~~~~~~~~~~----------------~~~~~~~~~~~aa 238 (374)
.+ +.....+|++++| |+++++. +.|+++.+++. ...+...... ...+.+.....+.
T Consensus 182 --~~--~~~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~ 256 (376)
T TIGR01977 182 --PI--DMTELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGL 256 (376)
T ss_pred --CC--CchhcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHH
Confidence 11 1122456776554 9988654 55666655442 2222211000 0113456667777
Q ss_pred HHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCcee--eEEEEeeeEEEEeccCCCchhHHHHHHHHHHC-CeE
Q 017259 239 IASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK--EVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GIL 312 (374)
Q Consensus 239 ~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~ 312 (374)
.++++++.+. .+.++.+++.+++++.+++.... .+.. +....+.++++.++.. +..++.+.|.++ ||.
T Consensus 257 ~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~L~~~~gi~ 330 (376)
T TIGR01977 257 NAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKV--KIYGPADPANRVGVVSFTVEGI----DSEEVADILDEKFDIA 330 (376)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe--EEeCCCCccccCCeEEEEECCC----CHHHHHHHHhccCCEE
Confidence 7788887654 45566667777777766543211 0111 1112356677777543 678899999988 998
Q ss_pred eccC--------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 313 AKPT--------------HDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 313 v~~~--------------~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
++.+ ..+.+|++++..+|++|++.++++|++
T Consensus 331 v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 331 TRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 8653 247899999999999999999999875
No 239
>PLN02368 alanine transaminase
Probab=99.90 E-value=1.2e-22 Score=190.84 Aligned_cols=246 Identities=10% Similarity=0.046 Sum_probs=163.5
Q ss_pred CCcHHHHHHHHhccc----CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMF----GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~----~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
.++++.+++++.+.. ..++|++|+|+++++..++.++. ..+| |+|+++.|+|..+...+...+....
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~----~~pG-----d~Vli~~P~Y~~y~~~~~~~g~~~v 180 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI----RGEK-----DGVLVPVPQYPLYSATISLLGGTLV 180 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc----CCCC-----CEEEEeCCCCccHHHHHHHcCCEEE
Confidence 345566666665543 35689999999999999998873 2567 9999999999887766555443322
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
... ...+..+ ..|++++++.++.. ..+++++++++++||||.+. +++.+++|.++|++||++||+||+|.
T Consensus 181 ~v~----~~~~~~~--~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~-s~e~l~~l~~~a~~~~~~II~DE~Y~ 253 (407)
T PLN02368 181 PYY----LEESENW--GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCL-SEANLREILKFCYQERLVLLGDEVYQ 253 (407)
T ss_pred EEe----cccccCC--CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 111 1000000 02789999988742 12688888888899999877 89999999999999999999999999
Q ss_pred CCccccc-Cc-cc-ccC-CC------CCcE---EEecccc-c-CCccchhhhe---eCHHHHhhcCCCCCCCCCCCCHHH
Q 017259 173 GLARSGR-ML-AS-DWE-EV------RPDM---VILGKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGNPLA 234 (374)
Q Consensus 173 ~~~~~g~-~~-~~-~~~-~~------~~d~---~s~sK~~-~-~G~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
++.+.+. .+ +. ... +. ...+ .||||.+ + .|+ |+||++ +++++++.+... ....++.+.++
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~-~~~~~~~~~~~ 331 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKV-ASIALSPNVSG 331 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc-ceEEEEEeCCCHHHHHHHHHH-hcccCCCCcHH
Confidence 8755442 21 11 110 11 1233 3889998 4 799 999988 478888887764 23466788899
Q ss_pred HHHHHHHHHHHh----------h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEE
Q 017259 235 SAVAIASLDVIR----------D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 288 (374)
Q Consensus 235 ~~aa~~al~~~~----------~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~ 288 (374)
+.++.++++.-. . .++.+.++++++.+.+.|+++ |+ +....+.|.|+.|
T Consensus 332 Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~----~g-~~~~~P~Gafy~~ 392 (407)
T PLN02368 332 QIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC----KN-VVCNFTEGAMYSF 392 (407)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CC-eEeCCCCeeeEec
Confidence 999988885210 0 123455555666665655543 22 2223345555543
No 240
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=1.5e-21 Score=183.75 Aligned_cols=296 Identities=16% Similarity=0.117 Sum_probs=192.0
Q ss_pred CcHHHHHHHHhcccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
...+++++.+++++| .+++++++|+++++..++..+.... .++| ++|++....|++.......+... +...
T Consensus 43 ~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~-~~~g-----~~vv~~~~~h~s~~~~~~~~~~~-g~~v 115 (381)
T PRK02948 43 SLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNAL-PQNK-----KHIITTPMEHASIHSYFQSLESQ-GYTV 115 (381)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhc-cCCC-----CEEEECCcccHHHHHHHHHHHhC-CCEE
Confidence 456778889999885 4589999999999999988875321 2345 88888776654433322221111 1110
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
...+...+. ..|++++++.++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++++ ++..
T Consensus 116 ~~v~~~~~~----~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~- 182 (381)
T PRK02948 116 TEIPVDKSG----LIRLVDLERAIT---PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKL- 182 (381)
T ss_pred EEEeeCCCC----CCCHHHHHHhcC---CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-cccc-
Confidence 000110000 127899988886 46889999999999999998 9999999999999999998876 4321
Q ss_pred cCcccccCCCCCcEE--EecccccCCccchhhheeCHHH-HhhcCCC----CCCCCCCCCHHHHHHHHHHHHHHhh--hc
Q 017259 179 RMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEV-MLCIQPG----EHGSTFGGNPLASAVAIASLDVIRD--EK 249 (374)
Q Consensus 179 ~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~--~~ 249 (374)
++... ....|++ +++|.++ .. ++|+++.++++ ...+... .....++.+.+++.++.++++.+.+ ++
T Consensus 183 -~~~~~--~~~~d~~~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~ 257 (381)
T PRK02948 183 -PIDVF--EMGIDSLSVSAHKIYG-PK-GVGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQE 257 (381)
T ss_pred -ccCcc--cCCCCEEEecHHhcCC-CC-cEEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 11222 2345655 6679765 22 45777777654 1111110 0112456788888888888886533 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceee--E-EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC---------
Q 017259 250 LAERSAHLGEELRQHLFKIQQQFPNYVKE--V-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------- 317 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------- 317 (374)
..++++++++++++.|+++... +... . ...+.++.+.++.- +..++...|.++||.++.+.
T Consensus 258 ~~~~~~~~~~~l~~~L~~~~~~---v~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~l~~~gI~v~~g~~c~~~~~~p 330 (381)
T PRK02948 258 ESLRFKELRSYFLEQIQTLPLP---IEVEGHSTSCLPHIIGVTIKGI----EGQYTMLECNRRGIAISTGSACQVGKQEP 330 (381)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC---EEEeCCCccCcCCEEEEEeCCC----CHHHHHHhcccCCEEEEchHhcCCCCCCC
Confidence 5677777777777777665311 1111 0 01123444444432 46778888889999998532
Q ss_pred --------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 318 --------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 318 --------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+++|++++..+|++|++++++.|+++++ .+
T Consensus 331 ~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~-~~ 375 (381)
T PRK02948 331 SKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGN-QF 375 (381)
T ss_pred CHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 36899999999999999999999999887 54
No 241
>PLN02242 methionine gamma-lyase
Probab=99.89 E-value=2.8e-22 Score=188.88 Aligned_cols=298 Identities=12% Similarity=0.114 Sum_probs=192.8
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...+|+++|++++|.+.+++++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 68 ~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al-----~~~G-----D~Vl~~~~~Y~~~~~~~~~~~~ 137 (418)
T PLN02242 68 YIYSRHFNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQL-----CSSG-----GHVVASNTLYGGTHALLAHFLP 137 (418)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHH-----hCCC-----CEEEEcCCcHHHHHHHHHHhhh
Confidence 34555678999999999999999999999999999999999988 4567 9999999988554322211100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. .....+.+++..|+++++++++. ++++++++++++|++|.+.+ +++|.++|++||++||+|++|+
T Consensus 138 ~--------~~G~~~~~~d~~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~ 203 (418)
T PLN02242 138 R--------KCNITTTFVDITDLEAVKKAVVP--GKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFA 203 (418)
T ss_pred h--------ccCceEEEcCCCCHHHHHHhcCc--CCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCC
Confidence 0 01122334445589999988862 15899999999999999987 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEEEecccccC-Cccc-hhhheeCHHHHhhcCCCCCC--CCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMVILGKALGG-GVIP-VSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~-~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.+... . ..++.+.-+.|+||.+++ |+ + +|++++++++++.++..... ..++.....+.|++.+...-...
T Consensus 204 ~~~~~--~---~~~g~divv~S~SK~l~g~g~-~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl~ 277 (418)
T PLN02242 204 PMVLS--P---ARLGADVVVHSISKFISGGAD-IIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPHLS 277 (418)
T ss_pred ccCCC--H---HHcCCcEEEEeCccccCCCCC-ceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcHH
Confidence 54211 1 112222223488999985 66 5 58888888888877644222 12233333444444333211112
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHh--CCCcee---------eE---EEEeeeEEEEeccCCCchhHHHHHHHHHHC----C
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQ--FPNYVK---------EV---RGRGLFNAVEFDKTALPVSAYDICLKMKER----G 310 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~---------~~---~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~----G 310 (374)
...++.+++++++.+.|++.... +|+... .. .+.|.++.|++... ..+..|++.|.-- .
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~---~~~~~f~~~l~~~~~~~~ 354 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTE---ERANRLMRYLQNSTQFGF 354 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCH---HHHHHHHHHhhcccccce
Confidence 34567778888888888775311 121111 01 25678888888532 2466777776522 1
Q ss_pred eEec----------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 311 ILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 311 i~v~----------~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.++ |. ..+.+|++.++-. +.+.+++-|+++++
T Consensus 355 ~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~---~~~dli~dl~~al~ 414 (418)
T PLN02242 355 MAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTG---TLEQRWSQFEKALS 414 (418)
T ss_pred eeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCC---CHHHHHHHHHHHHH
Confidence 1121 10 1468999944321 25667777777776
No 242
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=1.9e-22 Score=188.40 Aligned_cols=292 Identities=17% Similarity=0.165 Sum_probs=196.4
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+.++.++...+|+++++++.|.+.+++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 32 ~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l-----~~~g-----d~Vl~~~~~y~~~~~~~~~~~~ 101 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLAL-----LKAG-----DHVVASDDLYGGTYRLFERLLP 101 (369)
T ss_pred ceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHH-----cCCC-----CEEEECCCCcchHHHHHHHHHh
Confidence 34455778999999999999999899999999999999999988 4567 9999999998775432221111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.+|+++++++++ +++++++++++.|++|.+.+ +++|.++|++||+++|+|++|+
T Consensus 102 ~---------~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~ 165 (369)
T cd00614 102 K---------LGIEVTFVDPDDPEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFA 165 (369)
T ss_pred h---------cCeEEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 113355566678899998886 47899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-C-ccchhhheeCH-HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G-~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.... . .......|++ |++|.++| | . ++|++++++ ++.+.++..........+++.+.++...++.+.
T Consensus 166 ~~~~-~-----~~~~~g~Divv~S~tK~l~g~~~~-~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~- 237 (369)
T cd00614 166 TPYL-Q-----RPLELGADIVVHSATKYIGGHSDV-IAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLP- 237 (369)
T ss_pred chhc-C-----ChhhhCCcEEEeccceeccCCCCc-eEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHH-
Confidence 3211 1 1122345655 78899985 4 5 788888876 777777643333344567777666666665332
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHh----CCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe-
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQ----FPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA- 313 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v- 313 (374)
...++..++..++.+.|++.... +|+... ...+.|.++.|.++.+. ....+|.+.|.--.+.+
T Consensus 238 -~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~--~~~~~f~~~l~~~~~~~s 314 (369)
T cd00614 238 -LRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGL--EAAKKFLNALKLFSLAVS 314 (369)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCH--HHHHHHHHcCCcceEccc
Confidence 34566677777787777654211 121100 01245888888886321 13444554443221111
Q ss_pred ---------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 314 ---------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 314 ---------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
.+. .++.+|+++++ |+.+.+++.|.+++
T Consensus 315 ~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 315 LGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 110 14689999664 56777777777765
No 243
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.89 E-value=9.9e-21 Score=177.74 Aligned_cols=286 Identities=15% Similarity=0.129 Sum_probs=184.8
Q ss_pred CcHHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHccc-ccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 21 DKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGY-VKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~-~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
+..+++++.|++++|.+ ++++++|+++++..++.++..... ..+| ++|++.+++|+++...+...+.
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-----~~vl~~~~~h~~~~~~~~~~G~----- 128 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT-----PNIIVPESAHFSFEKAAEMLGL----- 128 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC-----cEEEECCcchHHHHHHHHHcCC-----
Confidence 34577889999988864 678899999999988877643110 1234 8899999887553332222211
Q ss_pred ccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.+..+++ .|+++++++++++ ..+++++. +.+++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 129 --------~~~~v~~~~~~~~d~~~l~~~l~~~--~~~vv~~~-~~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~ 193 (373)
T TIGR03812 129 --------ELRYAPLDEDYTVDVKDVEDLIDDN--TIGIVGIA-GTTELGQIDD----IEELSKIALENGIYLHVDAAFG 193 (373)
T ss_pred --------eEEEEeeCCCCCcCHHHHHHHHhhC--cEEEEEEC-CCCCCCccCC----HHHHHHHHHHcCCeEEEEcCch
Confidence 1122221 2789999988742 23445554 4678898888 9999999999999999999998
Q ss_pred CCccc----ccC-cccccCCCCCcEEEec--ccccCCccchhhhe-eCHHHHhhcCCCCCC--C------CCCCCHHHHH
Q 017259 173 GLARS----GRM-LASDWEEVRPDMVILG--KALGGGVIPVSAVL-ADKEVMLCIQPGEHG--S------TFGGNPLASA 236 (374)
Q Consensus 173 ~~~~~----g~~-~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~-~~~~~~~~~~~~~~~--~------~~~~~~~~~~ 236 (374)
++... |.. ...+......|.+++| |...++. |.|+++ .++++.+.+...... . ..+.+....+
T Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~ 272 (373)
T TIGR03812 194 GFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAA 272 (373)
T ss_pred hHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHH
Confidence 54110 000 0111111134555554 7444566 777654 577777665421110 0 0133456677
Q ss_pred HHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 237 VAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 237 aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
++.++++.+..+ ++.++..++.+++++.|+++. ......+..+++.+.++ ...++.++|.++||.+
T Consensus 273 ~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v 341 (373)
T TIGR03812 273 ATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG-----FEPVIEPVLNIVAFEVD------DPEEVRKKLRDRGWYV 341 (373)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEcCCCceEEEEEeC------CHHHHHHHHHHCCcee
Confidence 788888876543 456777777888888777652 21111233455555544 2458999999999999
Q ss_pred ccC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 314 KPT-HDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 314 ~~~-~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+.. .++++|++++..++++|+++++++|++
T Consensus 342 ~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 342 SVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 876 467999999888999999999999875
No 244
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=4.6e-21 Score=179.54 Aligned_cols=302 Identities=16% Similarity=0.159 Sum_probs=195.1
Q ss_pred HHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCC
Q 017259 3 ALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHG 82 (374)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg 82 (374)
++.+.+..+..+ +..+..++++++++++++.+++++++||++|+..++.++. .++| |+|+++.++|.+
T Consensus 16 ~~~~~l~~~~~~---g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~----~~~G-----d~Viv~~~t~~~ 83 (375)
T PRK11706 16 YIQQAMSSGKLC---GDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLD----IQPG-----DEVIMPSYTFVS 83 (375)
T ss_pred HHHHHHHcCCcc---CCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC----CCCC-----CEEEECCCCcHH
Confidence 445555444332 2256678899999999999999999999999998887663 5677 999999999977
Q ss_pred cccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 83 RTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
........+..+.+. ++..-.+ .|+++++++++ ++++++++.+ ++|...+ +++|.++|++|
T Consensus 84 ~~~~~~~~G~~~v~~--------d~d~~~~~~d~~~le~~i~---~~tk~i~~~~---~~G~~~~----~~~i~~la~~~ 145 (375)
T PRK11706 84 TANAFVLRGAKIVFV--------DIRPDTMNIDETLIEAAIT---PKTRAIVPVH---YAGVACE----MDTIMALAKKH 145 (375)
T ss_pred HHHHHHHcCCEEEEE--------ecCCCcCCcCHHHHHHhcC---CCCeEEEEeC---CCCCccC----HHHHHHHHHHc
Confidence 655544433322211 1111111 27899999887 4678887653 4676666 99999999999
Q ss_pred CCEEEEeccccCCc-ccccCcccccCCCCCcEEEec----ccccCCccchhhheeCHHHHhhcCCCC-------------
Q 017259 162 NILMIADEIQSGLA-RSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLADKEVMLCIQPGE------------- 223 (374)
Q Consensus 162 ~i~li~Dea~~~~~-~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~~~~~~~~~~~~------------- 223 (374)
|++||+|++|+.+. ..|... +...|+.+|| |.++.|. +++++..++++.++++...
T Consensus 146 ~i~vIeD~a~a~g~~~~~~~~-----g~~~~~~~~Sf~~~K~l~~g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 219 (375)
T PRK11706 146 NLFVVEDAAQGVMSTYKGRAL-----GTIGHIGCFSFHETKNYTAGE-GGALLINDPALIERAEIIREKGTNRSQFFRGQ 219 (375)
T ss_pred CCEEEEECccccccccCCeee-----ecCcCEEEEeCCCCccccccC-CeEEEECCHHHHHHHHHHHHcCCCcchhhccC
Confidence 99999999998332 222211 2223666777 9998776 6566666777766443211
Q ss_pred --------CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCceeeEEEEeeeEEEEec
Q 017259 224 --------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVEFD 291 (374)
Q Consensus 224 --------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~g~~~~~~~~ 291 (374)
.+.++-++.+..+.+++.++.+ +.+.++.+++.+++.+.|..+.. .+|...........++++.++
T Consensus 220 ~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 220 VDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR 297 (375)
T ss_pred CCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence 1233344556666666666654 34566666777777777765421 111111111233445666665
Q ss_pred cCCCchhHHHHHHHHHHCCeEeccC----C----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 292 KTALPVSAYDICLKMKERGILAKPT----H----------------------DTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~Gi~v~~~----~----------------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+.. +.+++.+.|.++||.++.. + ...+.+-++...+++|++.+++.|++++
T Consensus 298 ~~~---~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 298 DLE---DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CcC---CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 433 6899999999999986421 0 2344554455678999999999998765
No 245
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.3e-21 Score=164.78 Aligned_cols=319 Identities=15% Similarity=0.154 Sum_probs=212.5
Q ss_pred hHHHHHHHhccccCc-CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC-
Q 017259 2 KALQEQAEKLTLSSR-AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC- 79 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~- 79 (374)
+.|++++..-..... ++.++...+|+++.++++|.|..+|.+||+.++.++++.-. -.+| .+||+-+.+
T Consensus 36 deMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc----~~rg-----~eii~gd~~H 106 (384)
T KOG1368|consen 36 DEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHC----HQRG-----SEIIVGDRAH 106 (384)
T ss_pred HHHHHHHhhcccCcccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHh----cCCC-----ceEEeccchh
Confidence 467777766444333 34577788899999999999999999999999999999886 3456 667666554
Q ss_pred CCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHh-----cCCcEEEEEEccccCCCCcccCChhHHHHH
Q 017259 80 FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE-----SGDQIAGFLFEPIQGEAGVIIPPDGYLKAV 154 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l 154 (374)
-|-+..+..+.-+.-.. ....+. .+... |++++|+++.. |.+.++.+++|+.+++.|+.+.+-++++++
T Consensus 107 I~~~E~gg~s~l~gv~~-~tv~~e-~dgtm----~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v 180 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGVHV-RTVKNE-NDGTM----DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV 180 (384)
T ss_pred eeehhccChhhhcccee-EeeeeC-CCCee----eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence 23333333322111000 000000 11111 79999999983 446799999999999888777789999999
Q ss_pred HHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcE--EEecccccCCccchhh-heeCHHHHhhcCCC--CCCCCCC
Q 017259 155 RDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM--VILGKALGGGVIPVSA-VLADKEVMLCIQPG--EHGSTFG 229 (374)
Q Consensus 155 ~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~--~s~sK~~~~G~~~~G~-~~~~~~~~~~~~~~--~~~~~~~ 229 (374)
.++|++||+.|..|.+.-.-...........+.-..|- +++||++++ |+|- ++++++++++.+-. ..+..+-
T Consensus 181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgA---PVGSViVG~k~FI~kA~~~RKalGGGmR 257 (384)
T KOG1368|consen 181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGA---PVGSVIVGSKDFIDKARHFRKALGGGMR 257 (384)
T ss_pred HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCC---CcccEEEccHHHHHHHHHHHHHhcCchh
Confidence 99999999999999876411000011111112122333 378899983 5665 66788887765422 2344455
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE-EEeeeEEEEeccCCCchhHHHHHHHHHH
Q 017259 230 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKE 308 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (374)
.+.+.++|++.+++. .....+.-+++.+.+.+.+.... .+...+. .+.++..+.+... +.+++++++.+.+
T Consensus 258 QsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~~----~i~v~v~a~etNiv~~~l~q~--~~~~~~l~~~~~k 329 (384)
T KOG1368|consen 258 QSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTPE----EIRVEVPAVETNIVNMVLCQA--RLTAEELCKFLEK 329 (384)
T ss_pred HHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhcccc----ceeeecchhhcceeeeecccc--cCCHHHHHHHHHH
Confidence 566777788877763 22345555666666666655331 1323333 4566777666332 2379999999999
Q ss_pred CCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHH-HHHh
Q 017259 309 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALH-DVLE 346 (374)
Q Consensus 309 ~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~-~~~~ 346 (374)
.||.+-......+||.++...|+++++.+.+.+. .++.
T Consensus 330 ~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 330 NGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred CCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 9999988877779999999999999999999994 4444
No 246
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=6.1e-21 Score=179.23 Aligned_cols=315 Identities=16% Similarity=0.129 Sum_probs=192.5
Q ss_pred CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 17 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
+..++...+|++.+++++|.+++++++||++|+..+++++ .++| |.| +.+++|..+.......++.+..
T Consensus 49 Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al-----~~pG-----D~V-~~~~~f~~~~~~i~~~Ga~pv~ 117 (431)
T cd00617 49 YAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSIL-----LKPG-----RTV-PSNMHFDTTRGHIEANGAVPVD 117 (431)
T ss_pred cCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHh-----CCCC-----CEE-ccCCcccchHHHHHhCCCEeEE
Confidence 3447778999999999999999999999999999999887 6778 876 5677775544333333333332
Q ss_pred cccCCCCCCCceeccC---CCHHHHHHHHHhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 97 IRGFGPLLPGHLKVDF---GDITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~d~~~le~~l~~~-~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
...-..... -...|+ -|+++|+++|+++ ..++++++++.++|++|+.+.+.+.+++|.++|++||++||.|+++.
T Consensus 118 v~i~~~~~~-~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~ 196 (431)
T cd00617 118 LVIDEAHDA-QELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARF 196 (431)
T ss_pred Eeccccccc-ccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 211000000 000112 2899999999854 24588899988888874455589999999999999999999999975
Q ss_pred C----C------cccccCccccc---CCCCCcEEEec--ccccCCccc-hhhheeCH-HHHhhcCCCC----CCCCCCC-
Q 017259 173 G----L------ARSGRMLASDW---EEVRPDMVILG--KALGGGVIP-VSAVLADK-EVMLCIQPGE----HGSTFGG- 230 (374)
Q Consensus 173 ~----~------~~~g~~~~~~~---~~~~~d~~s~s--K~~~~G~~~-~G~~~~~~-~~~~~~~~~~----~~~~~~~- 230 (374)
. | ++.+.... +. ..-..|..++| |..+ . + +|++++++ +++++++... ...++++
T Consensus 197 ~~na~~i~~r~~g~~~~si~-ei~~e~~s~sd~~~mS~~K~~~--~-~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~ 272 (431)
T cd00617 197 AENAYFIKEREEGYRDKSIA-EIAREMFSYADGCTMSAKKDGL--V-NIGGFLALRDDELYEEARQRVVLYEGFVTYGGM 272 (431)
T ss_pred HhhhhhhhcccccccCCCHH-HHHHHhhccCCEEEEEeecCCC--C-ccceEEEeCcHHHHHHHHHhccccCCccccccc
Confidence 1 1 11111110 00 00122333333 3322 1 3 34678876 5888876421 1123333
Q ss_pred CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----chhHHHHHHH
Q 017259 231 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLK 305 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~ 305 (374)
+.-.+++...+|+...+.++.++..++++++.+.|++.+ +....+..+++++++++.... ..++.+++..
T Consensus 273 ~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~G-----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~ 347 (431)
T cd00617 273 AGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEAG-----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAE 347 (431)
T ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHH
Confidence 222233333255442223344444445577777777663 222234456777877653110 1147788877
Q ss_pred HH-HCCeEecc-----------C------CCCEEEEecCC-CCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 306 MK-ERGILAKP-----------T------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 306 l~-~~Gi~v~~-----------~------~~~~lRi~~~~-~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
|. +.||.+.. . ....+|++++. ..|.++++.+.++|..+++ ....+.
T Consensus 348 L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~-~~~~~~ 413 (431)
T cd00617 348 LYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYE-RREDIR 413 (431)
T ss_pred HHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHh-hHhhCC
Confidence 66 45787532 0 13789998775 6799999999999999997 554444
No 247
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=2.9e-20 Score=176.18 Aligned_cols=286 Identities=17% Similarity=0.185 Sum_probs=183.6
Q ss_pred cccC--CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCcee
Q 017259 32 SMFG--YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLK 109 (374)
Q Consensus 32 ~~~~--~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (374)
+++| .++++|++|+|++++.++..+. ++| .++++|++.+..|..............+ .... .....
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~~-----~~~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g----~~~~-~~~~~ 147 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASFY-----KPT--PKRYKILLEAKAFPSDHYAIESQLQLHG----LTVE-ESMVQ 147 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHhc-----CCc--CCccEEEecCCCCChHHHHHHHHHHhcC----CCcc-cceEE
Confidence 5665 4589999999999999888762 222 0124677777776553332221100000 0000 00011
Q ss_pred ccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccc
Q 017259 110 VDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 184 (374)
Q Consensus 110 ~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~ 184 (374)
++. .|++++++.+++..+++++++++++++.+|.+.| +++|.++|+++|+++++|++|+ +|.. ++...
T Consensus 148 ~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~ 220 (406)
T TIGR01814 148 IEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLH 220 (406)
T ss_pred eccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--ccccc
Confidence 111 1678888888755578999999999999999999 9999999999999999999998 2211 22222
Q ss_pred cCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCC-------------C----------CCCCCHHHHHHHH
Q 017259 185 WEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------------S----------TFGGNPLASAVAI 239 (374)
Q Consensus 185 ~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~-------------~----------~~~~~~~~~~aa~ 239 (374)
...+|++++| |++.||. + |+++..++....+.+...+ . ..+++..+.+++.
T Consensus 221 --~~gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~ 296 (406)
T TIGR01814 221 --DWGVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALR 296 (406)
T ss_pred --cCCCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHH
Confidence 3445666554 9998776 5 5554443333333321110 0 1234667777788
Q ss_pred HHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCc--ee--eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE
Q 017259 240 ASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNY--VK--EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 312 (374)
Q Consensus 240 ~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 312 (374)
++++.+.+. ...++.+.+.+++++.|+++....+++ .. ....++.++.|.++ . ...++.+.|.++||.
T Consensus 297 ~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~----~~~~~~~~L~~~gi~ 371 (406)
T TIGR01814 297 GSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V----PGKAVFQALIKRGVI 371 (406)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C----CHHHHHHHHHHCCEE
Confidence 888887553 556777777777777776642101111 11 11123456666666 2 467899999999999
Q ss_pred eccCCCCEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 017259 313 AKPTHDTIVRLTP-PLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 313 v~~~~~~~lRi~~-~~~~~~e~i~~~~~~l~~~~ 345 (374)
+....++.+|+++ ++.+|++|+++++++|++++
T Consensus 372 v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 372 GDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 8876668999999 68999999999999998875
No 248
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=1.5e-20 Score=174.89 Aligned_cols=291 Identities=13% Similarity=0.176 Sum_probs=179.7
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccC----------CCCccEEEEeccCCCCcc---c
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKF----------SIDEAIIVSCCGCFHGRT---L 85 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~----------~~~~~~vi~~~~~yhg~~---~ 85 (374)
..+..+++++++++++|.+++++++|+++|+..+++.+. ++|. ....++|+++.|.|..+. .
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~-----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~ 117 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVI-----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVE 117 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHh-----cCCCcchhhcccccccccceEEEECccchhcCCchH
Confidence 356788899999999999999999999999999999884 4440 001148888887764332 1
Q ss_pred ccccccC-CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHhcCC
Q 017259 86 AAISMSC-DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNI 163 (374)
Q Consensus 86 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i 163 (374)
....+.+ .+.+. +.. ...|+++++++++ ++|++++ ++++++++|.+.+ +++|.++|++||+
T Consensus 118 ~~~~~~g~~~v~v--------~~~--~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi 180 (363)
T TIGR01437 118 TMVRLGGGKVVEA--------GYA--NECSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNL 180 (363)
T ss_pred HHHHhcCCeEEEE--------cCC--CCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCC
Confidence 1111111 11111 110 1138999999997 5677665 4555677888887 9999999999999
Q ss_pred EEEEeccccCCcccccCcccccCCCCCcEEEe--cccccCCccchhhheeCHHHHhhcCCCCCC--CCCCCCHHHHHHHH
Q 017259 164 LMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAI 239 (374)
Q Consensus 164 ~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~ 239 (374)
++|+|++|+.- .. ... ....|++++ +|.++ |+ ++|+++.++++++.+.....+ ..+......+++..
T Consensus 181 ~vivD~a~~~~---~~--~~~--~~g~D~~~~S~~K~l~-gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~ 251 (363)
T TIGR01437 181 PLIVDAAAEED---LQ--KYY--RLGADLVIYSGAKAIE-GP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLT 251 (363)
T ss_pred eEEEECCCCCc---hH--HHH--HcCCCEEEEeCCcccC-CC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHH
Confidence 99999999711 10 001 123466644 59875 55 678888888777766432211 11122223344555
Q ss_pred HHHHHHhhh--cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE--EEee---eEEEEeccCCCchhHHHHHHHHHHCC--
Q 017259 240 ASLDVIRDE--KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGL---FNAVEFDKTALPVSAYDICLKMKERG-- 310 (374)
Q Consensus 240 ~al~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~g~---~~~~~~~~~~~~~~~~~~~~~l~~~G-- 310 (374)
++++.+.+. +..+...++.++++++|+++ |++....+ ..+. ...+.++....+.+..++.+.|.++|
T Consensus 252 aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i----~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~ 327 (363)
T TIGR01437 252 AALEQYLSTGKESGAEMVAKLTPFIEALNTL----KGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPA 327 (363)
T ss_pred HHHHHHHccCcccHHHHHHHHHHHHHHHhcC----CCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCC
Confidence 555554332 33444445566676666654 22211111 1011 11122322111237899999999877
Q ss_pred eEecc--CCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 311 ILAKP--THDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 311 i~v~~--~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
|.+++ ...+.+|+.+.. .+++|++.++++|++++
T Consensus 328 I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 328 IYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred EEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 77775 347789998874 66999999999998763
No 249
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.87 E-value=1.5e-20 Score=175.18 Aligned_cols=296 Identities=16% Similarity=0.189 Sum_probs=193.4
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.+....+ +..+...++++.+++++|.+++++++||++|++.+++.+. ..+| ++|+++.++|+
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~----~~~g-----d~vl~~~~~~~ 69 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALG----IGPG-----DEVIVPSFTFV 69 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC----CCCC-----CEEEeCCcchH
Confidence 566776666554 3367899999999999999999999999999999998773 3566 99999999988
Q ss_pred CcccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
+........+....+. + +....+ .|+++++++++ ++++++++++ ++|...+ +++|.++|++
T Consensus 70 ~~~~~~~~~g~~~~~~----~----~~~~~~~~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~ 131 (352)
T cd00616 70 ATANAILLLGATPVFV----D----IDPDTYNIDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKR 131 (352)
T ss_pred HHHHHHHHcCCeEEEE----e----cCCCcCCcCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHH
Confidence 7654443332221111 1 110011 27889988885 5788888765 4577777 9999999999
Q ss_pred cCCEEEEecccc-CCcccccCcccccCCCCCcEEEec----ccccCCccchhhheeC-HHHHhhcCCC---C--------
Q 017259 161 YNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQPG---E-------- 223 (374)
Q Consensus 161 ~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~-~~~~~~~~~~---~-------- 223 (374)
+|+++|+|++|+ |....+. ..+...|+.++| |.+++| ++|+++.+ +++.+.++.. .
T Consensus 132 ~~i~li~D~a~~~g~~~~~~-----~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (352)
T cd00616 132 HGLPVIEDAAQALGATYKGR-----KVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKY 204 (352)
T ss_pred cCCeEEEECCCCCCCeECCE-----EcccCcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCcc
Confidence 999999999998 2211111 112223555444 988544 45666665 4665544321 0
Q ss_pred ----CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeE---EEEeeeEEEEecc--CC
Q 017259 224 ----HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDK--TA 294 (374)
Q Consensus 224 ----~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~g~~~~~~~~~--~~ 294 (374)
.+.++..+.+..+.+...++.+ +++.++.+++.+++++.|.++... .+.... .....++.+.+++ ..
T Consensus 205 ~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (352)
T cd00616 205 EHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGI--RLPDVPPGVKHSYHLYVIRLDPEAGE 280 (352)
T ss_pred ccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCc--cCCCCCCCCceeeEEEEEEECCcCCC
Confidence 1112344566655555555443 345677777888888877764211 111111 1244566666653 22
Q ss_pred CchhHHHHHHHHHHCCeEeccCC---------------------------CCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 295 LPVSAYDICLKMKERGILAKPTH---------------------------DTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 295 ~~~~~~~~~~~l~~~Gi~v~~~~---------------------------~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
+..++.+.|.++||.++... .+.+|++++..+|++|++.++++|+
T Consensus 281 ---~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 ---SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ---CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 68899999999999765210 1589999999999999999999874
No 250
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.87 E-value=3e-21 Score=181.08 Aligned_cols=291 Identities=16% Similarity=0.129 Sum_probs=190.1
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++++++...+|++.+++++|.+..++++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 53 ~~y~r~~~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al-----~~~G-----d~Vv~~~~~y~~~~~~~~~~~~ 122 (386)
T PRK06767 53 YIYSRLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGF-----LKAG-----DHIICSNGLYGCTYGFLEVLEE 122 (386)
T ss_pred ccccCCCCcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEcCCcHHHHHHHHHHHHh
Confidence 44556778999999999999999999999999999999888777 4567 9999999887443322211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
... .++..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 123 ~~g---------i~~~~~~~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a 186 (386)
T PRK06767 123 KFM---------ITHSFCDMETEADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFC 186 (386)
T ss_pred hcC---------eEEEEeCCCCHHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 101 1233334457889988886 57899999999999999998 9999999999999999999996
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccch-hhheeCHHHHhhcCCC-CCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~-G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.. ..+.+. ....|++ |++|.++| |. ++ |+++++++.++.+... ........+++.+.++..+++.+.
T Consensus 187 ~~-~~~~pl-----~~g~Div~~S~sK~l~g~g~-~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~- 258 (386)
T PRK06767 187 SP-YLQRPL-----ELGCDAVVHSATKYIGGHGD-VVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLA- 258 (386)
T ss_pred cc-ccCCch-----hcCCcEEEecCcceecCCCC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHH-
Confidence 21 111221 1233554 67799986 66 65 7788887766554311 111111235565555555554332
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC--
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-- 316 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-- 316 (374)
...++.+++..++.+.|++.... ..+. ...+.|.++.|+++.. .....+|.+.|...++.++-+
T Consensus 259 -~r~~~~~~~a~~la~~L~~~p~v--~~v~~p~~~~~~~~~~~~gg~vsf~l~~~--~~~~~~f~~~l~~~~~~~s~G~~ 333 (386)
T PRK06767 259 -VRMDRHCDNAEKIVSFLKNHDAV--EGVWYPEGELASRQMKRGGGVISFSIKGG--KEETQAFINDLHFITIAVSLGDT 333 (386)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCc--cEEECCCcHHHHHhCCCCCceEEEEEcCC--HHHHHHHHHhCCccEEecCCCCc
Confidence 24566677777777777654211 0111 1123467888888632 125677888887766555321
Q ss_pred -------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 -------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 -------------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.+|+++++ |+.+.+++-|.++++
T Consensus 334 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 334 ETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred CccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 14689999543 456666777776665
No 251
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=8.3e-21 Score=178.13 Aligned_cols=293 Identities=14% Similarity=0.138 Sum_probs=193.2
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++..++++++|+++.|.+.+++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 56 ~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~al-----l~~G-----D~Vi~~~~~y~~~~~~~~~~~~ 125 (398)
T PRK08249 56 HIYSRNTNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTF-----LKPG-----DRVVSIKDTYGGTNKIFTEFLP 125 (398)
T ss_pred ccccCCCChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHh-----cCCC-----CEEEEcCCchHHHHHHHHHHHh
Confidence 44556789999999999999999999999999999999998877 5567 9999999998664322211110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..|+++++++++ +++++++++.+.|++|.+.+ +++|.++|++||+++|+|++|+
T Consensus 126 ~---------~Gi~v~~vd~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a 189 (398)
T PRK08249 126 R---------MGVDVTLCETGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFA 189 (398)
T ss_pred h---------CCeEEEEcCCCCHHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcC
Confidence 0 012233344458999999887 57899999999999999998 9999999999999999999998
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccch-hhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.+.. ..+ .....|++ |+||.++| |- ++ |++++++++.+.+...........+++.+..+...++.+.
T Consensus 190 ~~~~-~~~-----l~~~~Divv~S~sK~l~g~~~-~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~-- 260 (398)
T PRK08249 190 TPIN-QNP-----LALGADLVIHSATKFLSGHAD-ALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLK-- 260 (398)
T ss_pred cccc-CCc-----hhhCCCEEeccCceecCCCCC-ceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHH--
Confidence 4321 111 12234544 77899986 44 44 5567778887776543333445667777777777776553
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe--
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA-- 313 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-- 313 (374)
...++.+++..++.+.|+.... .+|+.... ..+.|.++.|+++.+. ....+|++.|.--.+.+
T Consensus 261 ~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~--~~~~~f~~~l~l~~~~~s~ 338 (398)
T PRK08249 261 LRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGM--DTVKRLLPKLRYAHRAANL 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCH--HHHHHHHHhCCcceEccCC
Confidence 2356667777777777765321 12222111 2245788888886421 12344555443211111
Q ss_pred --------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 --------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 --------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. .++.+|++.++ |+.+.+++-|.++++
T Consensus 339 G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 392 (398)
T PRK08249 339 GAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFA 392 (398)
T ss_pred CCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 110 14789999554 455666666666665
No 252
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.87 E-value=7.1e-21 Score=179.13 Aligned_cols=294 Identities=14% Similarity=0.121 Sum_probs=193.2
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+.+++++...+|++.|++++|.+.+++++||++|+..++..+ .++| |+|++.++.|.+..........
T Consensus 56 ~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~l-----l~~G-----d~Vl~~~~~y~~~~~~~~~~~~ 125 (400)
T PRK06234 56 YIYSRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSA-----LKAG-----DHVVASDTLYGCTFALLNHGLT 125 (400)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHH-----hCCC-----CEEEEecCccchHHHHHHHHHh
Confidence 34566778999999999999998889999999999999888777 5667 9999999887543322211000
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEecc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEI 170 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~--~i~li~Dea 170 (374)
.....+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++ |+++|+||+
T Consensus 126 ---------~~G~~v~~vd~~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea 189 (400)
T PRK06234 126 ---------RYGVEVTFVDTSNLEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNT 189 (400)
T ss_pred ---------hCCeEEEEECCCCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECC
Confidence 0112344455568999999887 57899999999999999988 99999999997 999999999
Q ss_pred ccCCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeCHHHHhhcCCCC--CCCCCCCCHHHHHHHHHHHHHH
Q 017259 171 QSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~ 245 (374)
|+... .+.+. +...|++ |+||.++| |...+|++++++++.+.++... .......+++.+..++..++.+
T Consensus 190 ~~~~~-~~~~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl 263 (400)
T PRK06234 190 FCTPY-IQRPL-----QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL 263 (400)
T ss_pred CCchh-cCCch-----hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH
Confidence 97431 11211 2234544 77899986 6613488888988877765321 1223456777776666666543
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE
Q 017259 246 RDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 312 (374)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 312 (374)
. ...++.+++..++.+.|+.... .+|+... ...+.|.++.|.++... ....+|.+.|.-.++.
T Consensus 264 ~--~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~--~~~~~f~~~l~~~~~~ 339 (400)
T PRK06234 264 Q--IRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV--EEGKVVMNNVKLATLA 339 (400)
T ss_pred H--HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH--HHHHHHHHhCCcceEe
Confidence 2 2455666677777777764211 1121110 01245778888886321 1345666666544433
Q ss_pred eccC---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 313 AKPT---------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 313 v~~~---------------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++-+ .++.+|++.++ |+.+.+++.|.++++
T Consensus 340 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 396 (400)
T PRK06234 340 VSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALD 396 (400)
T ss_pred ccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 3111 14789999554 345556666666665
No 253
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.87 E-value=1.9e-20 Score=174.02 Aligned_cols=283 Identities=18% Similarity=0.121 Sum_probs=168.9
Q ss_pred cHHHHHHHHhcccCCC----eEEecCChHHHHHHHHHHHHHcccc---cccCCCC-ccEEEEeccCCCCcccccccccCC
Q 017259 22 KFPVFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYV---KKKFSID-EAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~~----~~~~~~~gs~a~~~al~~~~~~~~~---~~G~~~~-~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
..+++++++++++|.+ ++++|+||++|+..++.+++..... ..|.+++ ++.|++.+++|+.....+...+..
T Consensus 39 le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~ 118 (345)
T cd06450 39 MEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVK 118 (345)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcC
Confidence 3444555566666764 7999999999999999998642100 0000111 245666665644332222222211
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.... +...+. ..|+++|++++++ ++.++++++++.+.+++|.+.+ +++|.++|++||+++++|++
T Consensus 119 ~~~v----~~~~~~----~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a 186 (345)
T cd06450 119 VRLV----PVDEDG----RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVDAA 186 (345)
T ss_pred eEEe----eeCCCC----CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEech
Confidence 1110 110110 1279999999974 2236777888888888998887 99999999999999999999
Q ss_pred ccCCcccccCcccccCC-CCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 171 QSGLARSGRMLASDWEE-VRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 171 ~~~~~~~g~~~~~~~~~-~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
|+++............. ...|.+ +++|.++++. ++|+++.+ .+++ .++++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-g~g~~~~~-------------------~~~~---~~~l~~l~~ 243 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-GCSAVLVR-------------------ALKL---WATLRRFGR 243 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc-chHHHHHH-------------------HHHH---HHHHHHHhH
Confidence 98542211100000011 134544 5669888877 88887655 2333 334444433
Q ss_pred h---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC-CchhHHHHHHHHHHCCeEeccC----CCC
Q 017259 248 E---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAKPT----HDT 319 (374)
Q Consensus 248 ~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~----~~~ 319 (374)
+ +..++..++.+++.+.|+++ +++.....+...++.|.++... .+.+..++.++|.++|+++.+. ...
T Consensus 244 ~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~ 319 (345)
T cd06450 244 DGYGEHIDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPN 319 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeE
Confidence 3 44555556666666655543 2222112234556666665410 0115678999999996544332 257
Q ss_pred EEEEecCCCC-CHHHHHHHHHHHHH
Q 017259 320 IVRLTPPLSI-SSNELQEGSKALHD 343 (374)
Q Consensus 320 ~lRi~~~~~~-~~e~i~~~~~~l~~ 343 (374)
++|++++... +++|++++++.|++
T Consensus 320 ~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 320 VLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHh
Confidence 8999998764 99999999999875
No 254
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=1.4e-20 Score=176.47 Aligned_cols=282 Identities=17% Similarity=0.241 Sum_probs=198.2
Q ss_pred CCcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 20 NDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
.+..+++++.+++++|.+ +++|++|++++++.++..+... .++| ++|++.+..|++.......+....+
T Consensus 42 ~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~--~~~g-----~~vl~~~~~~~s~~~~~~~~~~~~g- 113 (371)
T PF00266_consen 42 AEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNP--LKPG-----DEVLVTSNEHPSNRYPWEEIAKRKG- 113 (371)
T ss_dssp HHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHH--GTTT-----CEEEEEESSHHHHHHHHHHHHHHTT-
T ss_pred hHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccc--cccc-----cccccccccccccccccccccccch-
Confidence 344567888899888654 5999999999999999988532 4566 8999999988776533333221101
Q ss_pred cccCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 97 IRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.++..++. .|++++++.|+ ++++++++....+.+|.+.| +++|.++||++|+++++|.++
T Consensus 114 --------~~v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~ 178 (371)
T PF00266_consen 114 --------AEVRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQ 178 (371)
T ss_dssp --------EEEEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TT
T ss_pred --------hhhccccccccchhhhhhhhhhhc---cccceEEeecccccccEEee----eceehhhhhccCCceeEechh
Confidence 11112211 27899999997 68999999999999999999 999999999999999999999
Q ss_pred cCCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCC------------------C---
Q 017259 172 SGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGST------------------F--- 228 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~------------------~--- 228 (374)
+ ++. ..++...+.+|++++| | ++|+. ++|++..++++.+.+++...+.. |
T Consensus 179 ~-~g~----~~id~~~~~~D~~~~s~~K-l~gp~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G 251 (371)
T PF00266_consen 179 S-AGC----VPIDLDELGADFLVFSSHK-LGGPP-GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGG 251 (371)
T ss_dssp T-TTT----SS--TTTTTESEEEEESTS-TTSSS-TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSS
T ss_pred c-ccc----ccccccccccceeeecccc-cCCCC-chhhheehhhhhhccccccccccccccccchhccccccccccccc
Confidence 8 321 1233334567888666 9 88887 88999999988888854322211 1
Q ss_pred CCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCce--eeEEEEeeeEEEEeccCCCchhHHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYV--KEVRGRGLFNAVEFDKTALPVSAYDIC 303 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (374)
..+.....+...+++.+.+. .+.++..++.+++++.|+++... .+. .....++.++.+.++.. +..++.
T Consensus 252 T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~~~~~~----~~~~~~ 325 (371)
T PF00266_consen 252 TPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGI--EVLGPDDEPRRPSIVSFNLPGS----DADDVV 325 (371)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTE--EESSSSCGGBGTTEEEEEETTS----SHHHHH
T ss_pred ceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCce--eEeeecccccccceEEEeecCC----CHHHHH
Confidence 35666677777788877442 45566666777777766664321 010 12234567777777554 689999
Q ss_pred HHHHHCCeEeccCC------------CCEEEEecCCCCCHHHHHHH
Q 017259 304 LKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEG 337 (374)
Q Consensus 304 ~~l~~~Gi~v~~~~------------~~~lRi~~~~~~~~e~i~~~ 337 (374)
+.|.++||.++.+. .+.+|++++..+|++|++++
T Consensus 326 ~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 326 KYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999999998742 38999999999999999975
No 255
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.8e-20 Score=159.02 Aligned_cols=302 Identities=17% Similarity=0.211 Sum_probs=208.8
Q ss_pred hHHHHHHHhccccC-c----CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTLSS-R----AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~~~-~----~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+|-.+++++..... + .++...+..|+.+++.+.+.|..++.+++..|+..++.+++.+ . |-|+..
T Consensus 88 ~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~p-----e-----dAvfSD 157 (417)
T KOG1359|consen 88 NAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTP-----E-----DAVFSD 157 (417)
T ss_pred HHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcCh-----h-----hhhhcc
Confidence 34455565533321 1 2667788999999999999999999999999999999988532 1 334333
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHh-cCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+ --|......+-+. ....+-|+-+++..+.. .+-+.++++.....++.|.+.| +++|.
T Consensus 158 e-LNhASIIdGirLc----------------kry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~ 216 (417)
T KOG1359|consen 158 E-LNHASIIDGIRLC----------------KRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEIS 216 (417)
T ss_pred c-cccchhhhhhHHH----------------hhhccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHH
Confidence 2 2244433332222 12222367777766653 2246888999999999999999 99999
Q ss_pred HHHHhcCCEEEEecccc-C-CcccccCcccccCCC--CCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCCCC
Q 017259 156 DLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 229 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~ 229 (374)
+++++||.++++||+|+ | +|.+|...+ +.++. ++|++ +++|++||. ..||+.++++++..+++....+-|+
T Consensus 217 ~La~kYgaLlfiDecHaTgf~G~tGrGt~-E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrqr~RpylFS 293 (417)
T KOG1359|consen 217 QLAKKYGALLFIDECHATGFFGETGRGTA-EEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQRSRPYLFS 293 (417)
T ss_pred HHHHhcCcEEEEeecccceeecCCCCChH-HHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHhcCCceeec
Confidence 99999999999999998 4 465665422 44443 45554 889998854 3577999999998888765544443
Q ss_pred C--CHHHHHHHHHHHHHH-hhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 230 G--NPLASAVAIASLDVI-RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 230 ~--~~~~~~aa~~al~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
. ++-....+..+++.+ .......+.+.+.+++++.++..+..+ ....-++..+.+.+.. .+.+.+++|
T Consensus 294 nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGftI------sg~~hPI~pv~lGda~---lA~~~ad~l 364 (417)
T KOG1359|consen 294 NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGFTI------SGASHPICPVMLGDAR---LASKMADEL 364 (417)
T ss_pred CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCcee------cCCCCCccceecccHH---HHHHHHHHH
Confidence 3 222233344455543 345778899999999999998764321 1111233333343332 678899999
Q ss_pred HHCCeEec-------cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 307 KERGILAK-------PTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 307 ~~~Gi~v~-------~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++.||++- |.+..-+|+.++..+|+||+|++++++.++.+
T Consensus 365 Lk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 365 LKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred HhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 99999883 33567899999999999999999999999887
No 256
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=3.5e-21 Score=180.20 Aligned_cols=257 Identities=15% Similarity=0.187 Sum_probs=170.6
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...++++.++++.|.+.+++++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 46 ~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al-----~~~G-----d~Vl~~~~~~~~t~~~~~~~~~ 115 (380)
T TIGR01325 46 FVYSRYANPTVAAFEERIAALEGAERAVATATGMSAIQAALMTL-----LQAG-----DHVVASRSLFGSTVGFISEILP 115 (380)
T ss_pred cceecCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEecCCcchHHHHHHHHHH
Confidence 34456778899999999999999999999999999999999877 4566 8999988776433221111110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....+..++.+|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 116 ---------~~g~~v~~v~~~d~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~ 179 (380)
T TIGR01325 116 ---------RFGIEVSFVDPTDLNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFA 179 (380)
T ss_pred ---------HhCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0113355566668899988876 57899999999999999988 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccch-hhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.+.. ..+ ....+|++ |++|.++| |. ++ |++++++++.+.++..........+++.+..++..++.+..
T Consensus 180 ~~~~-~~p-----l~~g~Divv~S~sK~l~g~g~-~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~- 251 (380)
T TIGR01325 180 TPVL-QQP-----LKLGADVVVYSATKHIDGQGR-VMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLSL- 251 (380)
T ss_pred cccc-CCc-----hhhCCCEEEeeccceecCCCC-eEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHHH-
Confidence 3211 111 12345665 67899986 55 55 66777888777766432222233455555555555554432
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------EEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------VRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
..++..++..++.+.|++... .+|+.... ..+.|.++.|++++. .....|.+.|.
T Consensus 252 -r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~---~~~~~f~~~l~ 319 (380)
T TIGR01325 252 -RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADR---AAAWKVLDAVE 319 (380)
T ss_pred -HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH---HHHHHHHHcCC
Confidence 356666677777777765321 12211111 124578888888621 14555666553
No 257
>PRK07049 methionine gamma-lyase; Validated
Probab=99.87 E-value=8.5e-21 Score=179.54 Aligned_cols=296 Identities=15% Similarity=0.172 Sum_probs=192.7
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++++++....|++.|+++.+.+.+++++||++|+..++..+ .++| |+|++..|.|.+..........
T Consensus 75 ~~y~R~~~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al-----~~~G-----d~Vv~~~p~Y~~~~~~~~~~l~ 144 (427)
T PRK07049 75 LVYSRFNHPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAF-----VRPG-----DVILHSQPLYGGTETLLAKTFR 144 (427)
T ss_pred ccccCCCCcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHH-----hCCC-----CEEEEcCCCcccHHHHHHHHHH
Confidence 34566889999999999999999999999999999999988887 5667 9999999999876544221100
Q ss_pred CccccccCCCCCCC-ceeccCCCHHHHHHHHHhc--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCC
Q 017259 93 DNEAIRGFGPLLPG-HLKVDFGDITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNI 163 (374)
Q Consensus 93 ~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~--~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~------~~i 163 (374)
..+ .. +.+....|.+++++.+.+. .++++++++++++||+|.+.+ +++|.+++++ +++
T Consensus 145 ~~G---------i~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~ 211 (427)
T PRK07049 145 NFG---------VGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRP 211 (427)
T ss_pred hcC---------cEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCC
Confidence 000 11 1111223678888777532 247899999999999999986 6666666655 899
Q ss_pred EEEEeccccCCcccccCcccccCCCCCcEE--Eeccccc--CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHH
Q 017259 164 LMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 239 (374)
Q Consensus 164 ~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~--~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 239 (374)
++|+||+|.++.... ++ ....|++ |+||.++ +|+ ++||+++++++.+.+.........+.+++.+.++.
T Consensus 212 ~vvvDety~~~~~~~-pl-----~~g~divv~S~SK~~gG~~gl-r~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~ 284 (427)
T PRK07049 212 IIACDNTLLGPVFQK-PL-----EHGADLSVYSLTKYVGGHSDL-VAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLG 284 (427)
T ss_pred EEEEECCccccccCC-cc-----ccCCCEEEEcCceeecCCCCc-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 999999986432111 11 1123544 8999999 488 99999999888887765433334556888888777
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCce--e---------eEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 240 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV--K---------EVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 240 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~--~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
..++.+. ...++..++..++.+.|++... .+|+.. . ...+.|.++.|++.... .....|++
T Consensus 285 r~L~tl~--~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~ 360 (427)
T PRK07049 285 RSLETLV--LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQ--AAAFRFLN 360 (427)
T ss_pred cCCChHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCH--HHHHHHHH
Confidence 7776542 2345556677777777765421 122211 0 01245778888886321 13445555
Q ss_pred HHHHCCeEe----------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 305 KMKERGILA----------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 305 ~l~~~Gi~v----------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|.--.+.+ .|. ..+.+|++.++ |+.+.+++-|.++++
T Consensus 361 ~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 361 ALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred cCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 553222111 110 14689999443 456667777777765
No 258
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=5.8e-20 Score=172.97 Aligned_cols=288 Identities=14% Similarity=0.153 Sum_probs=182.0
Q ss_pred HHHHHHHhccc---C---CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 24 PVFAERLTSMF---G---YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 24 ~~l~~~l~~~~---~---~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
..+++.++++. + .+++++|+|++++++.++..+......++| +++|++....|++.......+... +
T Consensus 42 ~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~----~~~vi~~~~e~ps~~~~~~~~~~~-G-- 114 (382)
T TIGR03403 42 PAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGG----KNHIITTEVEHPAVRATCAFLESL-G-- 114 (382)
T ss_pred HHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCC----CCEEEEcCCccHHHHHHHHHHHHC-C--
Confidence 34555544433 3 468999999999999998876311101222 267888876654433222211110 1
Q ss_pred ccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+..++.+ |+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++++
T Consensus 115 -------~~v~~v~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~ 180 (382)
T TIGR03403 115 -------VEVTYLPINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA 180 (382)
T ss_pred -------CEEEEEecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh
Confidence 112222221 6888988886 46889999999999999998 9999999999999999999987
Q ss_pred CCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCC-------CCCCCCCCHHHHHHHHHHHH
Q 017259 173 GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~aa~~al~ 243 (374)
++. . ..+......|++++| |.++ +. ++|+++.++.. .+.+.. ....++.+..++.++.++++
T Consensus 181 -~g~--~--~~~~~~~~~D~~~~s~~K~~g-p~-G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~ 251 (382)
T TIGR03403 181 -IGK--I--PVDVQKAGVDFLSFSAHKFHG-PK-GVGGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMR 251 (382)
T ss_pred -cCC--C--ccCccccCCCEEEEcchhhCC-CC-ceEEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHH
Confidence 211 1 122233456777666 9654 32 45676666543 122211 11234567778878888887
Q ss_pred HHhh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeE---EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC-
Q 017259 244 VIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH- 317 (374)
Q Consensus 244 ~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~- 317 (374)
...+ +...++.+...+++.+.|+++ +++.... ...+.++.+.++.. +..++.+.|.++||.++.+.
T Consensus 252 ~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~~~gI~v~~g~~ 323 (382)
T TIGR03403 252 LANEYLDFEKSHVRRLRDRLEDALLEL----PDVFVVGDREHRVPNTILISIKGV----EGEAMLWDLNKAGIAASTGSA 323 (382)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcC----CCEEEECCCCCCcCCEEEEEeCCC----CHHHHHHhhccCCEEEEchhc
Confidence 6543 123345555555555555442 2221111 11244556666543 57788888999999998521
Q ss_pred ----------------------CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 318 ----------------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 318 ----------------------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
.+.+|++++..+|++|++++++.|+++++ ++.
T Consensus 324 c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~-~~~ 377 (382)
T TIGR03403 324 CASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ-RLR 377 (382)
T ss_pred cCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 25799999999999999999999999987 653
No 259
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=1.3e-20 Score=175.62 Aligned_cols=288 Identities=13% Similarity=0.138 Sum_probs=185.5
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++++++...+|+++|+++.|.+..++++||++|+..++. + .++| |+|++.++.|++..........
T Consensus 44 ~~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~~-l-----l~~G-----d~Vl~~~~~y~~t~~~~~~~~~ 112 (366)
T PRK08247 44 FDYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVMS-L-----FRSG-----DELIVSSDLYGGTYRLFEEHWK 112 (366)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHH-H-----hCCC-----CEEEEecCCcCcHHHHHHHHhh
Confidence 445668899999999999999999989999999999987653 3 3466 9999999999774332221111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..|+++++++++ ++++++++++++|+++...+ +++|.++|++||+++|+|++|.
T Consensus 113 ~---------~G~~v~~vd~~d~~~l~~~i~---~~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 113 K---------WNVRFVYVNTASLKAIEQAIT---PNTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred c---------cCceEEEECCCCHHHHHHhcc---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 113344555568999999887 57899999999888876555 9999999999999999999995
Q ss_pred -CCcccccCcccccCCCCCcEEEecccccC--CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 -GLARSGRMLASDWEEVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~d~~s~sK~~~~--G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
++. ..+. ..+.+.-+.|+||.++| +. ..|+++.+ +++.+.+...........+++.+..+...++.+.
T Consensus 177 ~~~~--~~p~---~~g~di~i~S~sK~~~g~~d~-~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~-- 248 (366)
T PRK08247 177 TPVL--QRPL---EEGADIVIHSATKYLGGHNDV-LAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLA-- 248 (366)
T ss_pred cccc--cCch---hcCCcEEEeecceeccCCCce-eeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHH--
Confidence 221 1111 11222224488899985 45 67888876 5666666533333344556777766666665432
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHHH----------CCeEeccC-
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKE----------RGILAKPT- 316 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~----------~Gi~v~~~- 316 (374)
...++.+++.+.+.+.|++. |.+... .++.|.++.|.++.. .....|.+.+.- +.+++.|.
T Consensus 249 ~r~~~~~~~a~~l~~~L~~~----p~v~~v~~P~~gg~~sf~~~~~---~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~ 321 (366)
T PRK08247 249 LRMRQHEENAKAIAAFLNEQ----PGVTDVLYPGRGGMLSFRLQDE---EWVNPFLKSLKLITFAESLGGVESFITYPAT 321 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCeeEEecCCcCcEEEEEECCH---HHHHHHHHcCCcceEccCCCCCceEEECCcc
Confidence 23445566666666666543 333322 333677888877531 123334443221 12333332
Q ss_pred ----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 ----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+.+|++.+ -|+.+.+++-|.++++
T Consensus 322 ~~~~~~~~~~r~~~gi~~~~~R~svG----lE~~~dl~~dl~~al~ 363 (366)
T PRK08247 322 QTHADIPEEIRIANGVCNRLLRFSVG----IENVEDLIADLKQAFK 363 (366)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 1468899844 3466667777777776
No 260
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.8e-19 Score=163.57 Aligned_cols=296 Identities=19% Similarity=0.240 Sum_probs=216.0
Q ss_pred CCcHHHHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 20 NDKFPVFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
...+.++.+.|...++.+ -.+++.||+.++++++..+ +++| |+|++...+.+|....-+.-.....
T Consensus 37 ~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl-----~~pg-----dkVLv~~nG~FG~R~~~ia~~~g~~- 105 (383)
T COG0075 37 VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL-----VEPG-----DKVLVVVNGKFGERFAEIAERYGAE- 105 (383)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc-----cCCC-----CeEEEEeCChHHHHHHHHHHHhCCc-
Confidence 556777788888877644 4688899999999999988 6778 9999888888786544332221101
Q ss_pred cccCCCCCCCceeccC---CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 97 IRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
..+...++ -|+++++++|+++ +..+++.+.+.-.+||.+.| +++|+++|++||.++|+|.+-+
T Consensus 106 --------v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp----l~~I~~~~k~~g~l~iVDaVsS- 171 (383)
T COG0075 106 --------VVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP----LKEIAKAAKEHGALLIVDAVSS- 171 (383)
T ss_pred --------eEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccCc----HHHHHHHHHHcCCEEEEEeccc-
Confidence 11111112 1899999999965 56778888888889999999 9999999999999999999977
Q ss_pred CcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC------------------CCCCCCCCCHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG------------------EHGSTFGGNPLAS 235 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ 235 (374)
+| |..+..+.|+++.-+...-|++++.- ++|++..+++..+.+... ...+.|+++....
T Consensus 172 ~G--g~~~~vd~wgiDv~itgSQK~l~~PP-Gla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i 248 (383)
T COG0075 172 LG--GEPLKVDEWGIDVAITGSQKALGAPP-GLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLI 248 (383)
T ss_pred CC--CcccchhhcCccEEEecCchhccCCC-ccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHH
Confidence 32 44556666666443334459999765 668888888777766532 1244567788888
Q ss_pred HHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHC-Ce
Q 017259 236 AVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GI 311 (374)
Q Consensus 236 ~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi 311 (374)
.+..++++.+.++ +..++.+...+.+++.+++++..+ +............+..|.+. +..++...++++ |+
T Consensus 249 ~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~--~~~~~~~s~tvta~~~P~g~---~~~~~~~~~~~~~g~ 323 (383)
T COG0075 249 YALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL--FADPERRSPTVTAIKVPEGV---DDKKVRRALLKEYGV 323 (383)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc--ccCcccCCCceEEEECCCCC---CcHHHHHHHHHhCCE
Confidence 8999999998776 567788888889999998886442 23333445677777777654 444555566655 99
Q ss_pred EeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 312 LAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 312 ~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
.+..+. +..+||.-.-..+.+++...+.+|..++. ++
T Consensus 324 ~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~-~~ 364 (383)
T COG0075 324 EIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALR-EL 364 (383)
T ss_pred EecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHH-Hc
Confidence 998763 57999976668899999999999999998 65
No 261
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=2.2e-20 Score=174.61 Aligned_cols=276 Identities=15% Similarity=0.144 Sum_probs=184.0
Q ss_pred CcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
+.+++++++++++++. +++++++|+|++++.++..+.... .++| ++|++.+..|++.......+... +
T Consensus 43 ~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~-~~~g-----~~vl~~~~~h~s~~~~~~~~~~~-g--- 112 (364)
T PLN02651 43 DAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFY-KDKK-----KHVITTQTEHKCVLDSCRHLQQE-G--- 112 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhc-cCCC-----CEEEEcccccHHHHHHHHHHHhc-C---
Confidence 4466788999998865 489999999999999988774321 3456 88998877764432222221110 1
Q ss_pred cCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 99 GFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
..+..++. .|+++++++++ ++++++++.++++++|.+.+ +++|.++|++||+++++|.+|+
T Consensus 113 ------~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~- 178 (364)
T PLN02651 113 ------FEVTYLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA- 178 (364)
T ss_pred ------CEEEEEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-
Confidence 11112221 17899999887 57899999999999999998 9999999999999999999998
Q ss_pred CcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCC-------CCCCCCHHHHHHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDV 244 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~ 244 (374)
++ . ..++...+..|++++| |. +|+. ++|+++.+++....+.+...+ ...+.+..+..++.++++.
T Consensus 179 ~g---~-~~~~~~~~~~D~~~~s~hK~-~gp~-G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~ 252 (364)
T PLN02651 179 VG---K-IPVDVDDLGVDLMSISGHKI-YGPK-GVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACEL 252 (364)
T ss_pred hC---C-cccCcccCCCCEEEechhhh-CCCC-ceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHH
Confidence 21 1 1223334556888766 85 5555 678888888766666543221 1235577777888888887
Q ss_pred Hhhh--cHHHHHHHHHHHHHHHHHHHHHhCCCc--eee--E-EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC
Q 017259 245 IRDE--KLAERSAHLGEELRQHLFKIQQQFPNY--VKE--V-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH 317 (374)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 317 (374)
+.+. ++.++.+.+.+++++.|++. +|++ ... . ...+.++.|.++.. +..++.+.|.+ |.++.+.
T Consensus 253 ~~~~~~~i~~~~~~l~~~l~~~l~~~---~~~~~i~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~L~~--i~v~~g~ 323 (364)
T PLN02651 253 AMKEMDYDEKHMKALRERLLNGLRAK---LGGVRVNGPRDPEKRYPGTLNLSFAYV----EGESLLMGLKE--VAVSSGS 323 (364)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhh---CCCEEEECCCCcccCcCCEEEEEeCCC----CHHHHHHHhCC--EEEEchh
Confidence 7542 34556666666666666542 2222 111 1 11245677766543 57788888865 7775331
Q ss_pred -----------------------CCEEEEecCCCCCHHHHH
Q 017259 318 -----------------------DTIVRLTPPLSISSNELQ 335 (374)
Q Consensus 318 -----------------------~~~lRi~~~~~~~~e~i~ 335 (374)
.+.+|+|++..+|++|+|
T Consensus 324 ~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 324 ACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 368999999999999975
No 262
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.1e-19 Score=154.73 Aligned_cols=315 Identities=13% Similarity=0.152 Sum_probs=202.4
Q ss_pred cCcCCCCCcHHHHHHHHhcccCC----CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccc
Q 017259 14 SSRAFYNDKFPVFAERLTSMFGY----DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 89 (374)
Q Consensus 14 ~~~~~~~~~~~~l~~~l~~~~~~----~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~ 89 (374)
.++.+...+.+.+++.|.+.+|. +++.+|+|..++.-.+.-++..+ ...|. .+..++-..|.|-|+-.....
T Consensus 71 ~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~--~sdG~--~k~illPLaPeYiGY~d~~l~ 146 (417)
T COG3977 71 DGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGR--RSDGT--EKKILLPLAPEYIGYADAGLE 146 (417)
T ss_pred CCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCc--cCCCc--ceeEeeccChhhccccccccC
Confidence 33445566667788888887754 47899999988888888877532 33441 224455667788776544332
Q ss_pred ccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 90 MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
-..-..++...... +...+.-+.|.+.|. +. +++.+++++-+-|+||.+. +.+++.+|.++++.||+++|+|.
T Consensus 147 ~d~fVs~kP~iel~-~~g~FKY~vDF~~l~--i~---e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giPliIDn 219 (417)
T COG3977 147 EDLFVSAKPNIELL-PAGQFKYHVDFEHLH--IG---ESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIPLIIDN 219 (417)
T ss_pred ccceeeccCCcccc-cccceeeccCHHHcc--cc---cccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCcEEEec
Confidence 11111111111111 111111122666654 22 6899999999999999988 99999999999999999999999
Q ss_pred cccCCcccccCcccccCCCCCcEE---EecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH--
Q 017259 170 IQSGLARSGRMLASDWEEVRPDMV---ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-- 244 (374)
Q Consensus 170 a~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-- 244 (374)
+|+-. +.+-.|.-...-+.++++ |+||.=-+|. |+|.++++++++..+.......+..+..++.+.+...++.
T Consensus 220 AYg~P-FP~iifsd~~~~w~~NiilC~SLSK~GLPG~-R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gd 297 (417)
T COG3977 220 AYGVP-FPGIIFSDATPLWNENIILCMSLSKLGLPGS-RCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGD 297 (417)
T ss_pred ccCCC-CCceecccccccCCCCEEEEeehhhcCCCCc-ceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcch
Confidence 99721 112111111123455544 6667433688 9999999999999998765556666666666666555443
Q ss_pred ---HhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC----
Q 017259 245 ---IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---- 317 (374)
Q Consensus 245 ---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---- 317 (374)
+.++-++.-++.+.......|+.....+| .....+....|.|+.+.+.+ .+..++++.|+.+|+++.|++
T Consensus 298 l~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~-~~iHkpEGAIFlWLWf~dLP--Itt~~LYq~LKa~Gvl~VPG~~FFp 374 (417)
T COG3977 298 LLRLSEQVIRPFYRNRVQTTIAILRRYLPEYR-CLIHKPEGAIFLWLWFKDLP--ITTEELYQRLKARGVLMVPGHYFFP 374 (417)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhcCccc-eeeecCCcceeehhhhccCC--CCHHHHHHHHHhCeEEEecccccCC
Confidence 11222334444455555555555544432 22222333455565555543 267899999999999998863
Q ss_pred ---------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 ---------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 ---------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..++|++ +.-+++++++.+.+|.+.++
T Consensus 375 Gl~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 375 GLDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVE 410 (417)
T ss_pred CCCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHH
Confidence 5799999 88899999999999998887
No 263
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=6.3e-20 Score=171.93 Aligned_cols=306 Identities=15% Similarity=0.150 Sum_probs=192.3
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.+..+.. +..+...+|++++++++|.+++++++||++|+.+++.++. .++| |+|++.+++|.
T Consensus 18 ~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~----~~~G-----d~Viv~~~~~~ 84 (379)
T PRK11658 18 AAVKEVLRSGWI----TTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALG----IGPG-----DEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC----CCCC-----CEEEECCCcHH
Confidence 345555554433 3366789999999999999999999999999999998773 4567 99999999987
Q ss_pred CcccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
+........+..+.+ .++..-.+ .|+++++++++ +++++++..+ ++|...+ +++|.++|++
T Consensus 85 ~~~~~~~~~G~~~v~--------vd~~~~~~~~d~~~l~~~i~---~~tkav~~~~---~~G~~~d----~~~i~~~a~~ 146 (379)
T PRK11658 85 STLNMIVLLGATPVM--------VDVDRDTLMVTPEAIEAAIT---PRTKAIIPVH---YAGAPAD----LDAIRAIGER 146 (379)
T ss_pred HHHHHHHHcCCEEEE--------EecCCCcCCcCHHHHHHhcc---cCCeEEEEeC---CCCCcCC----HHHHHHHHHH
Confidence 664443333222111 11111111 27899999887 5688877433 4677776 9999999999
Q ss_pred cCCEEEEecccc-CCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeC-HHHHhhcCCCC-------------
Q 017259 161 YNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGE------------- 223 (374)
Q Consensus 161 ~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~-~~~~~~~~~~~------------- 223 (374)
||++||+|++|+ |..+.|... ...+ .++.||+ |.+.+| ++|+++.+ +++.+.++...
T Consensus 147 ~gi~vi~D~a~a~g~~~~~~~~--g~~g--~~~~Sf~~~K~l~~g--~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 147 YGIPVIEDAAHAVGTYYKGRHI--GARG--TAIFSFHAIKNITCA--EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred cCCeEEEECCCccCCeECCeec--CCCC--CEEEeCCCCCcCccc--CceEEEECCHHHHHHHHHHHHcCCCcchhhhhc
Confidence 999999999998 433333221 1122 3567777 667654 46666654 66665543210
Q ss_pred -----------CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEec
Q 017259 224 -----------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFD 291 (374)
Q Consensus 224 -----------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~ 291 (374)
.+.++..+.+..+.++..++.+ +++.++.+++.+++++.|+.+.......... .......+.+.++
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEEC
Confidence 1223344555555555555544 3457777777888888776542110001011 1112233334443
Q ss_pred cCCCchhHHHHHHHHHHCCeEeccC-------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 292 KTALPVSAYDICLKMKERGILAKPT-------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~Gi~v~~~-------------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
....+.+.+++.+.|.++||.++.. ....+.+-++...++++++.++++|++++.
T Consensus 299 ~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 299 EERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG 378 (379)
T ss_pred CccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2211225889999999999877521 024455555667899999999999998764
No 264
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=1.3e-19 Score=171.64 Aligned_cols=288 Identities=12% Similarity=0.144 Sum_probs=183.3
Q ss_pred CcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
+..+++++.+++++|. ++++|++|++++++.++..+.... ..+| ++|++..+.|+........+... +.
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~-~~~g-----~~Vi~~~~~h~s~~~~~~~~~~~-g~-- 117 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFY-KSKG-----NHIITSKTEHKAVLDTCRYLERE-GF-- 117 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhh-cCCC-----CEEEECCCccHHHHHHHHHHHhc-CC--
Confidence 3466788889998865 489999999999999988774321 3456 88999888765433332211110 11
Q ss_pred cCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 99 GFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.+..++. .|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++++|++|+
T Consensus 118 -------~v~~v~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a- 182 (402)
T TIGR02006 118 -------EVTYLPPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS- 182 (402)
T ss_pred -------EEEEEccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-
Confidence 1112211 27889988886 46889999999999999998 9999999999999999999997
Q ss_pred CcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCC-------CCCCCCHHHHHHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDV 244 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~ 244 (374)
++.. .++..+..+|++++| |.++ +. ++|+++.+++....+.+...+ ...+.+.....+..++++.
T Consensus 183 ~g~~----~~~~~~~~~D~~~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~ 256 (402)
T TIGR02006 183 VGKI----PINVNELKVDLMSISGHKIYG-PK-GIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI 256 (402)
T ss_pred cCCc----ccCccccCCCEEEEehhhhcC-CC-ceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH
Confidence 2211 222334567888888 9664 44 568887776544444432221 1224466666666677877
Q ss_pred Hhhh--cHHHHHHHHHHHHHHHHHHHHHhCCCcee--eEE-EEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC---
Q 017259 245 IRDE--KLAERSAHLGEELRQHLFKIQQQFPNYVK--EVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--- 316 (374)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--- 316 (374)
+... ...++.+.+.+++++.|+. ++++.. ... ..+..+.+.+... ..+++...| +++.++.+
T Consensus 257 ~~~~~~~~~~~~~~l~~~l~~~l~~----~~~v~~~~~~~~~~p~~~~v~f~~~----~~~~~~~~l--~~i~v~~G~~c 326 (402)
T TIGR02006 257 AKEEMAQDTAHVLALRDRLLNGIKS----IEEVYLNGDLEHRVPGNLNVSFNYV----EGESLIMAL--KDLAVSSGSAC 326 (402)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCccccCCCeEEEEEeCc----CHHHHHHhc--CCEEEechhhc
Confidence 6542 2344555555555555543 222211 111 1112222333322 345565554 35554321
Q ss_pred --------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 317 --------------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 317 --------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+++|++++..+|++|++++++.|+++++ .+
T Consensus 327 ~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~-~~ 378 (402)
T TIGR02006 327 TSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAID-KL 378 (402)
T ss_pred CCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH-HH
Confidence 137899999999999999999999999987 65
No 265
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.86 E-value=1e-19 Score=172.62 Aligned_cols=287 Identities=17% Similarity=0.157 Sum_probs=175.4
Q ss_pred HHHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccc--ccCCccccccCCCCC
Q 017259 28 ERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS--MSCDNEAIRGFGPLL 104 (374)
Q Consensus 28 ~~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~--~~~~~~~~~~~~~~~ 104 (374)
+.+++++|.+.. ++.+||++|+..++..+ .++| |+|++.+++|.+....... +..... .....+..
T Consensus 72 ~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l-----~~~G-----d~Vl~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~ 140 (402)
T cd00378 72 ERAKKLFGAEYANVQPHSGSQANLAVYFAL-----LEPG-----DTIMGLDLSHGGHLTHGSFTKVSASGK-LFESVPYG 140 (402)
T ss_pred HHHHHHhCCCceeeecCCcHHHHHHHHHHh-----cCCC-----CEEEEecCccCccccccccccccccce-eEEEecCC
Confidence 356677776643 44457899999999888 5677 9999999998665332211 110000 00000110
Q ss_pred CCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCccccc-Ccc
Q 017259 105 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGR-MLA 182 (374)
Q Consensus 105 ~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~-~~~ 182 (374)
.+.... .-|++++++++.+. ++++++++++.+ |...+ +++|.++|++||+++|+|++|. |+...|. ...
T Consensus 141 ~~~~~~-~id~~~l~~~i~~~--~~~~v~~~~~~~--~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~ 211 (402)
T cd00378 141 VDPETG-LIDYDALEKMALEF--KPKLIVAGASAY--PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP 211 (402)
T ss_pred cCcccC-CcCHHHHHHHHHhC--CCCEEEecCccc--CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc
Confidence 100000 11799999988643 567777755433 44555 9999999999999999999974 4432332 111
Q ss_pred cccCCCCCcEE--EecccccCCccchhhheeCH-HHHhhcCCCCCCCCCCC-CHHHHHHHHHHHHHHhh---hcHHHHHH
Q 017259 183 SDWEEVRPDMV--ILGKALGGGVIPVSAVLADK-EVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLAERSA 255 (374)
Q Consensus 183 ~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~~~~~ 255 (374)
.. ..|++ |+||++ +|. ++|++++++ ++.+.+........++. ....++++..++..... +++.++++
T Consensus 212 ~~----~~dv~~~s~sK~l-~G~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 285 (402)
T cd00378 212 LP----GADVVTTTTHKTL-RGP-RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVV 285 (402)
T ss_pred cc----CCcEEEeccccCC-CCC-CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 11 23544 788998 567 889988876 78777754322222222 22333333333433322 24566677
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC----------CCCEEEEec
Q 017259 256 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTP 325 (374)
Q Consensus 256 ~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~----------~~~~lRi~~ 325 (374)
++.+++.+.|++.+ + .... .+..+.++|+.+++.. .+...+.+.|.++||.+.+. ..+.+|+++
T Consensus 286 ~~~~~l~~~L~~~g--~-~~~~-~~~~~~~v~v~~~~~~--~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~ 359 (402)
T cd00378 286 ENAKALAEALKERG--F-KVVS-GGTDNHLVLVDLRPKG--ITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGT 359 (402)
T ss_pred HHHHHHHHHHHhCC--C-eEee-cCCCCeEEEEeCCccC--CCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecC
Confidence 77777777776642 1 1111 1234777888776321 14567778888889999631 346899987
Q ss_pred CCC----CCHHHHHHHHHHHHHHHh
Q 017259 326 PLS----ISSNELQEGSKALHDVLE 346 (374)
Q Consensus 326 ~~~----~~~e~i~~~~~~l~~~~~ 346 (374)
+.. .+++|++.+++.|+++++
T Consensus 360 ~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 360 PAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 653 479999999999999887
No 266
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=9.5e-20 Score=160.74 Aligned_cols=316 Identities=17% Similarity=0.162 Sum_probs=200.7
Q ss_pred hHHHHHHHhccc--cCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC
Q 017259 2 KALQEQAEKLTL--SSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC 79 (374)
Q Consensus 2 ~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~ 79 (374)
.+|++++..-+. ...++.++....+++++++.++.+.++|+.|||+|+.++|... .++| ..||+...+
T Consensus 14 ~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~-----~~~~-----~~vi~~~~a 83 (342)
T COG2008 14 PEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAH-----CQPG-----ESVICHETA 83 (342)
T ss_pred HHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHh-----cCCC-----CeEEEeccc
Confidence 467777766542 2334667777789999999999999999999999999999998 5666 788877665
Q ss_pred CCCcccccccccCCccccccCCCCCCCceecc----CCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHH
Q 017259 80 FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD----FGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLK 152 (374)
Q Consensus 80 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~ 152 (374)
|-.+.-+-.. .+..+..+. ..++ .-++++++..+.. +...+..++.++..+..|.++ +.++|+
T Consensus 84 -Hi~~~E~Ga~----~~~~~~~~~----~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy-~l~el~ 153 (342)
T COG2008 84 -HIYTDECGAP----EFFGGGQKL----PIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVY-PLDELE 153 (342)
T ss_pred -cceecccCcH----HHHcCCcee----ccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceec-CHHHHH
Confidence 4433222111 111000010 0111 0179999998884 223456666666666777776 899999
Q ss_pred HHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEEEecccccCCccchhh-heeCHHHHhhcCCC--CCCCCCC
Q 017259 153 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSA-VLADKEVMLCIQPG--EHGSTFG 229 (374)
Q Consensus 153 ~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~-~~~~~~~~~~~~~~--~~~~~~~ 229 (374)
+|.++|++||++|+.|.+.-.-.-.........+....|+++|+-+-++|+ ++|. ++++.++.+.++-. ..+.-++
T Consensus 154 ~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~-~~gAiv~gn~~~~~~a~~~rK~~Ggl~~ 232 (342)
T COG2008 154 AISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGA-PVGAIVFGNRDFAKRARRWRKRAGGLMR 232 (342)
T ss_pred HHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcc-eeeeEEEcCHHHHHHHHHHHHHhcccHh
Confidence 999999999999999987642100011123333444668776653334455 7776 55788887776532 2445555
Q ss_pred CCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHC
Q 017259 230 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 309 (374)
Q Consensus 230 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (374)
-..+..++...+|+ ++.........+.+..+|.+.....|++....+...+++++.+++.. .+.......+...
T Consensus 233 k~r~laA~~~~~l~----~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~--i~~l~~~~~~~~~ 306 (342)
T COG2008 233 KARFLAAQGLYALE----DDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA--IEALRLAGALFYR 306 (342)
T ss_pred hhhHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH--HHHHHhhchhhee
Confidence 56666666666665 33333333444444444444443333444445567888888877532 1233444455566
Q ss_pred CeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 310 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 310 Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
|+.+.+.+ ..+|+..+...+++++++++..+++++
T Consensus 307 ~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 307 GVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 77766654 679999999999999999999988764
No 267
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=4.7e-20 Score=172.39 Aligned_cols=293 Identities=16% Similarity=0.145 Sum_probs=191.4
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++++++...+|+++|+++.|.+.+++++||++|+..++..+ .++| |+|++..+.|++.......+..
T Consensus 44 ~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l-----~~~G-----D~Vl~~~~~y~~~~~~~~~~~~ 113 (386)
T PRK08045 44 HDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVF-----LKPG-----DLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_pred ceeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHH-----cCCC-----CEEEEcCCCcHHHHHHHHHHHh
Confidence 44567889999999999999998889999999999999999877 5677 9999999999764433222211
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
... ..+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 114 ~~g---------i~v~~vd~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~ 177 (386)
T PRK08045 114 RGC---------YRVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFL 177 (386)
T ss_pred hCC---------eEEEEeCCCCHHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCC
Confidence 111 1122222347889988886 57899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.... ..+ .....|++ |++|.++| +. ..|+++. ++++.+.+...........+++.+..+..+++-+..
T Consensus 178 ~~~~-~~p-----l~~gaDivv~S~tK~l~G~~d~-~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~ 250 (386)
T PRK08045 178 SPAL-QNP-----LALGADLVLHSCTKYLNGHSDV-VAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVP 250 (386)
T ss_pred cccc-CCc-----hhhCCCEEEeecceeccCCCCc-eeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHH
Confidence 4311 111 12233544 78899984 44 5777766 566766665332333445677887777777765422
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe-
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA- 313 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v- 313 (374)
..++..++..++.+.|+.-.. .+|+... ...+.|.++.|+++.+. .....|++.|.--.+.+
T Consensus 251 --R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s 326 (386)
T PRK08045 251 --RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE--QTLRRFLGGLSLFTLAES 326 (386)
T ss_pred --HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcH--HHHHHHHHhccceeEecc
Confidence 356666666667666664311 1121111 12345778888886421 12345555554222111
Q ss_pred ---------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ---------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ---------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. .++.+|++.++ |+.+.+++-|.++++
T Consensus 327 ~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 381 (386)
T PRK08045 327 LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFR 381 (386)
T ss_pred CCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence 111 14789999554 445556666666665
No 268
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=2.7e-20 Score=173.75 Aligned_cols=293 Identities=14% Similarity=0.164 Sum_probs=184.2
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++...++...+|+++++++.|.+..+.++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al-----~~~G-----d~Vl~~~~~~~~ty~~~~~~~~ 106 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALAL-----LKPG-----NSVLVHRDMFGRSYRFFTDYLK 106 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHH-----hCCC-----CEEEEecCCcCcHHHHHHHHHH
Confidence 44555778899999999999998887777888899999888877 5677 9999988766432221111110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.++.+.+++.++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+||+|+
T Consensus 107 ~---------~G~~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~ 170 (376)
T PRK06460 107 N---------WGVNVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFS 170 (376)
T ss_pred h---------hCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcC
Confidence 0 012233344444455554433 57899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--CccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.. ..... .....|++ |+||.++| +. ++|++++++++.+.+.........+.++..+..++..++.+.
T Consensus 171 ~~-~~~~~-----l~~~~divv~S~sK~l~G~~~~-~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~-- 241 (376)
T PRK06460 171 TP-INQKP-----LELGADIVVHSASKFLAGHNDV-IAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLK-- 241 (376)
T ss_pred cc-ccCCh-----hhcCCCEEEeecceeccCCCCc-eEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHH--
Confidence 42 11111 11223544 88899874 35 689999998888877643323333445555444445555443
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHH--C----
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKE--R---- 309 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~--~---- 309 (374)
...++++++++++.+.|++... .+|+... ...+.|.++.|+++.+. .....|++.|.- .
T Consensus 242 ~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~--~~~~~~~~~l~~~~~~~s~ 319 (376)
T PRK06460 242 IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQ--ESALKVMKSLKLIIPAQTL 319 (376)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcH--HHHHHHHHhCCcceeccCC
Confidence 3466777778888777775311 1121111 01356888898886431 134455555431 1
Q ss_pred C-e---EeccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 310 G-I---LAKPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 310 G-i---~v~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
| + +..|. .++.+|+++++ ||.+.+++.|.++++
T Consensus 320 Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 320 GGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred CCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 1 1 11110 15789999553 455666777777665
No 269
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.86 E-value=1.1e-20 Score=177.26 Aligned_cols=293 Identities=17% Similarity=0.192 Sum_probs=185.8
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++..++++++++++.|.+.+++++||++|+..++..+ .++| |+|++.++.|.+..........
T Consensus 53 ~~y~r~~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al-----~~~G-----d~Vi~~~~~y~~t~~~~~~~~~ 122 (390)
T PRK08133 53 NIYSRFTNPTVTMFQERLAALEGAEACVATASGMAAILAVVMAL-----LQAG-----DHVVSSRSLFGSTVSLFEKIFA 122 (390)
T ss_pred ceeECCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEccCcchhHHHHHHHHHH
Confidence 34456778889999999999999999999999999999999877 4567 9999998887554322111100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....+..++.+|+++++++++ ++++++++++++|++|.+.+ +++|.++|++||+++|+|++|+
T Consensus 123 ---------~~G~~v~~vd~~d~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~ 186 (390)
T PRK08133 123 ---------RFGIETTFVDLTDLDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFC 186 (390)
T ss_pred ---------HcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0113345556668999998887 57999999999999999988 9999999999999999999986
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccch-hhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.... ..+. ....|++ |+||.+++ |. ++ |+++.++++++.+...........+++.+..++..++.+.
T Consensus 187 ~~~~-~~pl-----~~g~Divv~S~sK~~~g~g~-~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl~-- 257 (390)
T PRK08133 187 TPAL-QQPL-----KLGADVVIHSATKYLDGQGR-VLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETLS-- 257 (390)
T ss_pred cccc-CCch-----hhCCcEEEeecceeecCCcc-eEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchHH--
Confidence 3211 1111 1223544 77899986 66 66 4566777766555432222233445555555544444332
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec-
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK- 314 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~- 314 (374)
...++..++...+.+.|++... .+|+... ...+.|.++.|++..+. .....|.+.|.--.+.++
T Consensus 258 ~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~--~~~~~f~~~l~l~~~~~sl 335 (390)
T PRK08133 258 LRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGR--EAAWRVIDATRLISITANL 335 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCH--HHHHHHHHhCCcceEeccC
Confidence 2345555666666666665311 1111111 12345788888886321 124455555432211111
Q ss_pred ---------cC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 ---------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 ---------~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|. .++.+|+++++ |+.+.+++-|.++++
T Consensus 336 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 336 GDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred CCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 10 14789999543 455667777777664
No 270
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.86 E-value=2.5e-20 Score=174.11 Aligned_cols=293 Identities=17% Similarity=0.165 Sum_probs=191.6
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++++++...+|++.|+++.+.+++++++||++|+..++..+ .++| |+|++..++|.+.......+..
T Consensus 43 ~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~al-----l~~G-----D~Vl~~~p~y~~~~~~~~~~~~ 112 (382)
T TIGR02080 43 YDYSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTAL-----LGPD-----DLLVAPHDCYGGTYRLLNALAK 112 (382)
T ss_pred CcccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHH-----cCCC-----CEEEEcCCCcHHHHHHHHHHHh
Confidence 34566889999999999999998899999999999999999888 5667 9999999999764433222221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
... ..+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 113 ~~~---------~~v~~~d~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~ 176 (382)
T TIGR02080 113 KGC---------FRVLFVDQGDEQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFL 176 (382)
T ss_pred hcC---------eEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 111 1122223347889998887 47899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.+... .++ ....|++ |++|.++| +. +.|+++. ++++.+.+...........+++.+..++..++.+..
T Consensus 177 ~~~~~-~pl-----~~gaDivv~S~sK~l~G~~~~-~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl~~ 249 (382)
T TIGR02080 177 SPALQ-NPL-----ALGADLVLHSCTKYLNGHSDV-IAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTLVA 249 (382)
T ss_pred ccccC-Cch-----hhCCCEEEeecceeccCCCCc-eeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchHHH
Confidence 33111 111 1223544 78899874 55 7888766 566766665433333456677777777666665433
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe-
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA- 313 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v- 313 (374)
..++..++...+.+.|+.-.. .+|+... ...+.|.++.|+++.+. ....+|++.|.--.+.+
T Consensus 250 --R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s 325 (382)
T TIGR02080 250 --RMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGE--QTVRRFLGGLSLFTLAES 325 (382)
T ss_pred --HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcH--HHHHHHHHcCCcceEecc
Confidence 255566677777776664211 1121111 11245778888886321 12334555443222111
Q ss_pred ---------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ---------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ---------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.+|++.++ |+.+.+++-|.++++
T Consensus 326 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 326 LGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred CCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 110 14689999543 456667777777765
No 271
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=4.3e-20 Score=172.22 Aligned_cols=301 Identities=19% Similarity=0.234 Sum_probs=193.6
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.++..+.+.. .+...+|++++++++|.++++.++||+.|+.++++++. .++| |+|+++..+|.
T Consensus 9 ~~v~~~l~s~~~~~~---g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~----~~~g-----deVi~p~~t~~ 76 (363)
T PF01041_consen 9 DAVLEVLRSGWLSTY---GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALG----LGPG-----DEVIVPAYTFP 76 (363)
T ss_dssp HHHHHHHHHTCCSSS---SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTT----GGTT-----SEEEEESSS-T
T ss_pred HHHHHHHHhCCccCC---CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcC----CCcC-----ceEecCCCcch
Confidence 455666666544321 67889999999999999999999999999999999975 6778 99999999987
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 160 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~ 160 (374)
+........+..+. +.++..-.++ |+++++++++ +++++|++.+..+ ...+ +++|.++|++
T Consensus 77 ~~~~ai~~~G~~pv--------~~Di~~~~~~id~~~~~~~i~---~~t~ai~~~h~~G---~~~d----~~~i~~~~~~ 138 (363)
T PF01041_consen 77 ATASAILWAGAEPV--------FVDIDPETLNIDPEALEKAIT---PKTKAILVVHLFG---NPAD----MDAIRAIARK 138 (363)
T ss_dssp HHHHHHHHTT-EEE--------EE-BETTTSSB-HHHHHHHHH---TTEEEEEEE-GGG---B-------HHHHHHHHHH
T ss_pred HHHHHHHHhccEEE--------EEeccCCcCCcCHHHHHHHhc---cCccEEEEecCCC---Cccc----HHHHHHHHHH
Confidence 66655555544333 3344433333 8999999999 6889999988874 3344 9999999999
Q ss_pred cCCEEEEecccc-CCcccccCcccccCCCCCcEEEec----ccccCCccchhhheeC-HHHHhhcCC---CC--------
Q 017259 161 YNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLCIQP---GE-------- 223 (374)
Q Consensus 161 ~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~-~~~~~~~~~---~~-------- 223 (374)
||++||.|.+|+ |-.+.|. ..|..-|+.+|| |.+..|- +|.++.+ +++.++++. ..
T Consensus 139 ~~i~lIeD~a~a~g~~~~g~-----~~G~~gd~~~fSf~~~K~i~~ge--GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 139 HGIPLIEDAAQAFGARYKGR-----PVGSFGDIAIFSFHPTKIITTGE--GGAVVTNDPELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp TT-EEEEE-TTTTT-EETTE-----ETTSSSSEEEEESSTTSSS-SSS---EEEEESTHHHHHHHHHHTBTTEETSECST
T ss_pred cCCcEEEccccccCceeCCE-----eccCCCCceEecCCCCCCCcCCC--CeeEEecHHHHHHHhhhhhccCcCcccccc
Confidence 999999999998 2211221 222334666555 8887554 4556665 455554432 11
Q ss_pred ------CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCceeeE-EEEeeeEEEEeccCCC
Q 017259 224 ------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF-PNYVKEV-RGRGLFNAVEFDKTAL 295 (374)
Q Consensus 224 ------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~~ 295 (374)
.+.++.++.+.++.+++.|+.+ +.+.++.+++.+++.+.|....... +...... ......+.+.+++...
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 289 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL 289 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC
T ss_pred ccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc
Confidence 2445677888888888888765 3346666677777777666653210 0011111 1334445555554311
Q ss_pred chhHHHHHHHHHHCCeEeccCC----------------------------CCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 296 PVSAYDICLKMKERGILAKPTH----------------------------DTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 296 ~~~~~~~~~~l~~~Gi~v~~~~----------------------------~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
.+.+++.+.|.++||.+++.. ...|.+-.+...++++++++++.|+
T Consensus 290 -~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 290 -ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp -STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 157899999999999986531 2345555566789999999998874
No 272
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.86 E-value=1.5e-20 Score=176.73 Aligned_cols=293 Identities=16% Similarity=0.193 Sum_probs=190.5
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+..|+++...+|+++|+++.|.+..+.++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 57 ~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~-----l~~G-----d~Vl~~~~~y~~~~~~~~~~~~ 126 (398)
T PRK07504 57 FIYSRYSNPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQ-----VKAG-----DHVVAARALFGSCRYVVETLLP 126 (398)
T ss_pred ceeecCCCchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHH-----hCCC-----CEEEEcCCchhHHHHHHHHHHh
Confidence 34456778899999999999999998888999999998877765 5667 9999999998664433221111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+ ..+..++..|+++++++++ +++++|++++++|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 127 ~~G---------~~v~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 127 RYG---------IESTLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred hcC---------eEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCcc
Confidence 101 2233334458899998886 57999999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccchh-hheeCHHHHh-hcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVS-AVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.... ..+ .....|++ |++|.++| |. ++| +++.+++++. .++..........+++.++.++..++.+..
T Consensus 191 ~~~~-~~~-----~~~gaDivv~S~sK~l~g~g~-~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~ 263 (398)
T PRK07504 191 TPLF-QKP-----LELGAHIVVYSATKHIDGQGR-CLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPV 263 (398)
T ss_pred cccc-CCc-----hhhCCCEEEeeccccccCCcc-ceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHH
Confidence 3211 111 12234555 67799985 77 776 4666666543 233211222335677777777777776533
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe-
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA- 313 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v- 313 (374)
..++..++..++.+.|++... .+|+.... ..+.|.++.|+++... .....|++.|.--.+.+
T Consensus 264 --R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~~~~~l~~~~~~~s 339 (398)
T PRK07504 264 --RVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGK--EAAFRFLNALKIVRISNN 339 (398)
T ss_pred --HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCH--HHHHHHHHhCCcceeccc
Confidence 356666777777777765321 12221111 1244888999885321 13445555543222211
Q ss_pred ---------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ---------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ---------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.+|++.++ |+.+.+++-|+++++
T Consensus 340 lG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 394 (398)
T PRK07504 340 LGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALK 394 (398)
T ss_pred CCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 110 14789999553 455666777777766
No 273
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=2.5e-20 Score=174.76 Aligned_cols=293 Identities=14% Similarity=0.114 Sum_probs=190.3
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.++++.+.+|+++|+++.|.+.+++++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al-----~~~G-----d~Vi~~~~~y~~t~~~~~~~~~ 120 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTI-----LKAG-----DHLISDECLYGCTFALLEHALT 120 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEecCcchHHHHHHHHHHh
Confidence 44566888999999999999999999999999999999888877 4567 9999999887543322211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.+|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 121 ~---------~G~~~~~vd~~d~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 121 K---------FGIQVDFINMAIPEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred c---------CCeEEEEECCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCc
Confidence 1 112344555568899988886 57899999999999999988 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccc-hhhheeCHHHHhhcCCCCC--CCCCCCCHHHHHHHHHHHHHHh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIP-VSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~-~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~ 246 (374)
.. ..+.+ .+...|++ |++|.+++ |. + +|++++++++++.++.... ......+++.++.++..++.+.
T Consensus 185 ~~-~~~~~-----~~~g~Divv~S~sK~lgg~g~-~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~ 257 (391)
T TIGR01328 185 TP-MLTNP-----VALGVDVVVHSATKYIGGHGD-VVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLN 257 (391)
T ss_pred hh-ccCCc-----hhcCCCEEEccccccccCCCC-ceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHH
Confidence 32 11221 12334554 77799985 55 4 4667788888777663211 1123446666665555554332
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 247 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
...++.+++..++.+.|+.... .+|+.... ..+.|.++.|+++.+. ....+|.+.|.--.+.+
T Consensus 258 --~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~ 333 (391)
T TIGR01328 258 --IRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGF--AGAKKLLNNLKLIRLAV 333 (391)
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCH--HHHHHHHHhCCcceEec
Confidence 3456667777777777765321 11211111 1244778888886321 12444555443211111
Q ss_pred ----------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ----------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ----------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.+|++.++ |+.+.+++-|.++++
T Consensus 334 s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 334 SLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALD 389 (391)
T ss_pred CCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 010 14689999443 456777777777776
No 274
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=5.6e-20 Score=172.44 Aligned_cols=296 Identities=15% Similarity=0.070 Sum_probs=183.4
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.++++..++|+++++++.|.+++++++||++|+..++..+ .++| |+|++.+++|.+..........
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al-----~~~G-----D~Vl~~~~~y~~~~~~~~~~~~ 126 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGL-----VKAG-----DDVLIPDNAYGPNRDHGEWLAR 126 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHH-----hCCC-----CEEEEecCCcccHHHHHHHHHH
Confidence 44566889999999999999999999999999999999999888 5677 9999999999764432111111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..+.++++++++ +++++++++++.|+++...+ +++|.++|+++|+++|+|++|+
T Consensus 127 ~---------~Gi~v~~vd~~~~~~l~~~i~---~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 127 D---------FGITVRFYDPLIGAGIADLIQ---PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred h---------cCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCcc
Confidence 0 012233333335677888876 57999999999988886666 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccCCc-cchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGGGV-IPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.... ........|++ |++|.++|+. +++|+++. ++++.+.++........+.+++.+..+...++.+.
T Consensus 191 ~~~~------~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl~-- 262 (394)
T PRK07050 191 AGLA------FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSLQ-- 262 (394)
T ss_pred cccc------cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcHH--
Confidence 2110 11111223544 7889998532 15777665 56777766543222233445554433333333221
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---h-CCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec-
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ---Q-FPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK- 314 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~- 314 (374)
...++..++..++.+.|++... . +|+... ...+.|.++.|.+..........+|.+.|...++.++
T Consensus 263 ~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~ 342 (394)
T PRK07050 263 VRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSW 342 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeecccc
Confidence 1234444555556665554311 0 111110 1123467777777542112356677777776654332
Q ss_pred --------cC------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 --------PT------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 --------~~------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|. .++.+|+++++- +.+.+++-|.++++
T Consensus 343 G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE----~~~dl~~dl~~al~ 390 (394)
T PRK07050 343 GGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE----DEADLIADLEQALE 390 (394)
T ss_pred CCccceEeeCcccccchhhcCCCCCEEEEEeCcC----CHHHHHHHHHHHHH
Confidence 21 136799995544 44455555555554
No 275
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.85 E-value=6.4e-19 Score=166.75 Aligned_cols=296 Identities=17% Similarity=0.150 Sum_probs=184.1
Q ss_pred CCcHHHHHH----HHhcccCCCeEE-ecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccc-ccccccCC
Q 017259 20 NDKFPVFAE----RLTSMFGYDMVL-PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL-AAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~----~l~~~~~~~~~~-~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~-~~~~~~~~ 93 (374)
++...+|++ ++++++|.+.++ +++||+.|+..++.++ .++| |+|++.+.+|.+... ++......
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al-----~~~G-----D~Vl~~~~~~~~~~~~g~~~~~~~ 138 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLAL-----LKPG-----DTILGMSLSHGGHLTHGAKVSLSG 138 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHh-----cCCC-----CEEEEcCccceeeeecCCcceecc
Confidence 567888998 999999999885 4699999999999988 6678 999999988655222 21110000
Q ss_pred ccccccCCCCCCCcee-ccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 94 NEAIRGFGPLLPGHLK-VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+.. ...++.. ....|++++++.++.+ ++++|+++.. ..|...+ +++|.++|++||++||+|++|+
T Consensus 139 ~~~~~----~~~~~~~~~~~~d~~~le~~l~~~--~~klVi~~~~--~~g~~~d----l~~l~~la~~~g~~livD~Aha 206 (416)
T PRK13034 139 KWYNA----VQYGVDRLTGLIDYDEVEELAKEH--KPKLIIAGFS--AYPRELD----FARFREIADEVGALLMVDMAHI 206 (416)
T ss_pred ceeee----EEcccccccCCcCHHHHHHHHhhc--CCeEEEECCC--ccccccC----HHHHHHHHHHcCCEEEEeCccc
Confidence 00000 0011110 0113899999988653 4677877432 2355666 9999999999999999999998
Q ss_pred -CCcccccCcccccCCCCCcEE--EecccccCCccchhhheeCH-HHHhhcCCCCCCC-CCCCCHHHHHH-HHHHHHHHh
Q 017259 173 -GLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADK-EVMLCIQPGEHGS-TFGGNPLASAV-AIASLDVIR 246 (374)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~a-a~~al~~~~ 246 (374)
|....|. .....+ ..|++ |++|+++|+. +|++++++ .+.+.++...... +-...+...++ +.+.++.+.
T Consensus 207 ~G~~~~g~--~~~~~~-~~Di~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~ 281 (416)
T PRK13034 207 AGLVAAGE--HPNPFP-HAHVVTTTTHKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ 281 (416)
T ss_pred ccCcccCC--CCCCCC-CceEEEEeCcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC
Confidence 3222222 111111 25655 6679996543 35566654 4444444321111 11122223333 334444432
Q ss_pred h--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc---------
Q 017259 247 D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP--------- 315 (374)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~--------- 315 (374)
. .++.++++++.+++++.|++.+.. .... ....+.+.+.+.+.. .....+.+.|.++||.+..
T Consensus 282 ~~~~~~~~~l~~~a~~l~~~L~~~G~~---~~~~-~~~t~i~~v~~~~~~--~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 355 (416)
T PRK13034 282 PEFKTYAKQVIANAQALAEVLKERGYD---LVSG-GTDNHLLLVDLRPKG--LSGKDAEQALERAGITVNKNTVPGDTES 355 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCE---eccC-CCCCcEEEEEcCCCC--CCHHHHHHHHHhCCcEEeccCCCCCCcC
Confidence 2 245788999999999988776322 1111 123555666554321 1456677888889999964
Q ss_pred -CCCCEEEEecCC----CCCHHHHHHHHHHHHHHHhccC
Q 017259 316 -THDTIVRLTPPL----SISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 316 -~~~~~lRi~~~~----~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+..+|++++. .++++|++++++.|++++. ..
T Consensus 356 p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~-~~ 393 (416)
T PRK13034 356 PFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD-DL 393 (416)
T ss_pred CCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh-cC
Confidence 224679999877 6779999999999999998 54
No 276
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.85 E-value=1.2e-19 Score=170.93 Aligned_cols=221 Identities=16% Similarity=0.159 Sum_probs=157.8
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...+|++.|+++.|.+..+.++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 57 ~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~l-----l~~G-----d~Viv~~~~y~~t~~~~~~~~~ 126 (403)
T PRK07503 57 HFYSRISNPTLALLEQRMASLEGGEAAVALASGMGAITATLWTL-----LRPG-----DEVIVDQTLYGCTFAFLHHGLG 126 (403)
T ss_pred ceeeCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHH-----cCCC-----CEEEEccCccchHHHHHHHHHh
Confidence 44556778899999999999999888899999999999998876 5677 9999999887432221111100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....+..++.+|+++++++++ +++++++++++.|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 127 ---------~~G~~v~~vd~~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a 190 (403)
T PRK07503 127 ---------EFGVTVRHVDLTDPAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYC 190 (403)
T ss_pred ---------hCCEEEEEeCCCCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0112344555568999998887 57899999999999999988 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeCHHHHhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.. ..+.+. +...|++ |++|.++| |-.++|+++.++++.++++.. ........+++.++.++..++.+.
T Consensus 191 ~~-~~~~~l-----~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~- 263 (403)
T PRK07503 191 TP-YLQRPL-----ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLA- 263 (403)
T ss_pred cc-ccCCch-----hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHH-
Confidence 32 112221 2334554 77899996 422788888888887777532 222345667777777777666542
Q ss_pred hcHHHHHHHHHHHHHHHHHH
Q 017259 248 EKLAERSAHLGEELRQHLFK 267 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~ 267 (374)
...++..++..++.+.|+.
T Consensus 264 -~r~~~~~~na~~~a~~L~~ 282 (403)
T PRK07503 264 -LRMDRHCASAQAVAEWLAR 282 (403)
T ss_pred -HHHHHHHHHHHHHHHHHHh
Confidence 2345555677777777765
No 277
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=4.1e-20 Score=173.75 Aligned_cols=221 Identities=18% Similarity=0.167 Sum_probs=155.1
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++..++|+++|+++.|.+.+++++||+.|+..++..+ .++| |+|++....|.+..........
T Consensus 62 ~~Y~r~~~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~al-----l~~G-----d~Vl~~~~~~~~t~~~~~~~~~ 131 (403)
T PRK07810 62 FVYSRYGNPTVSMFEERLRLIEGAEACFATASGMSAVFTALGAL-----LGAG-----DRLVAARSLFGSCFVVCNEILP 131 (403)
T ss_pred cceeCCCCchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHH-----hCCC-----CEEEEccCCcchHHHHHHHHHH
Confidence 33566889999999999999999999999999999999988877 4567 9999887665443222111110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..|+++++++++ +++++|+++++.|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 132 ~---------~G~~v~~vd~~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 132 R---------WGVETVFVDGEDLSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred H---------cCcEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCC
Confidence 0 113344555568999999887 57899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccch-hhheeCHHHHh-hcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPV-SAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~-G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
... ...+. ....|++ |++|.++| |. ++ |+++++++... .++..........+++.++.++..++.+.
T Consensus 196 ~~~-~~~~~-----~~gaDivv~S~tK~l~g~g~-~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~- 267 (403)
T PRK07810 196 TPL-LQRGL-----PLGADVVVYSGTKHIDGQGR-VLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLA- 267 (403)
T ss_pred ccc-cCChh-----hcCCcEEEccCCceecCCcC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHH-
Confidence 221 11111 1234655 66799986 66 55 66777766443 33322122233567788777777777553
Q ss_pred hcHHHHHHHHHHHHHHHHHHH
Q 017259 248 EKLAERSAHLGEELRQHLFKI 268 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~ 268 (374)
...++..++..++.+.|+..
T Consensus 268 -~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 268 -LRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred -HHHHHHHHHHHHHHHHHhcC
Confidence 34666667777777766653
No 278
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=1.1e-19 Score=168.66 Aligned_cols=286 Identities=17% Similarity=0.131 Sum_probs=184.5
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++...+|+++|+++.+.++++.++||++|+.+++. + .++| |+|++..+.|.+..........
T Consensus 46 ~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~-----l~~G-----D~VI~~~~~yg~~~~~~~~~~~ 114 (364)
T PRK07269 46 FDYTRTKNPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-V-----FPVG-----SKVVAVRDLYGGSFRWFNQQEK 114 (364)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-H-----hCCC-----CEEEEecCCcCchHHHHHHHHh
Confidence 445668899999999999999999999999999999998884 4 3567 9999999988654322111110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.. .+...-..|+++++++++ +++++|+++++.|++|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 115 ~~-----------~~~~~~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~ 176 (364)
T PRK07269 115 EG-----------RFHFTYANTEEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFY 176 (364)
T ss_pred cC-----------cEEEEecCCHHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCc
Confidence 00 011101137899998887 57999999999999998888 9999999999999999999975
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
... ... ..+...|++ |++|.++| |-+-.|+++. ++++.+.++..........+++.+..++..|+.+.
T Consensus 177 ~~~-~~~-----pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~-- 248 (364)
T PRK07269 177 SPI-YQR-----PIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLS-- 248 (364)
T ss_pred ccc-cCC-----chhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHH--
Confidence 211 111 123445666 55699885 3102455666 45666666532212234567787777777776542
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHHHC----------CeEeccC-
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKER----------GILAKPT- 316 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~----------Gi~v~~~- 316 (374)
...++.+++..++.+.|+. .|.+... .++.|.++.|.+... .....|.+.+.-. .+++.|.
T Consensus 249 ~r~~~~~~na~~~a~~L~~----~p~v~~v~ypg~gg~~sf~~~~~---~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~ 321 (364)
T PRK07269 249 LRMERSTANAQEVVAFLKK----SPAVKEVLYTGKGGMISFKVADE---TRIPHILNSLKVFTFAESLGGVESLITYPTT 321 (364)
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCccEEeCCCcCcEEEEEECCH---HHHHHHHHhCCcceEccCCCCcCeEeeCCcc
Confidence 2355666666666666654 3322222 256688888887531 1334444443322 2233231
Q ss_pred ----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 ----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.++.+|++.++ |+.+.+++-|.++++
T Consensus 322 ~~~~~~~~~~r~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 322 QTHADIPAEVRHSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 14789999443 456667777776664
No 279
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.84 E-value=5.3e-19 Score=178.96 Aligned_cols=300 Identities=13% Similarity=0.133 Sum_probs=200.4
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChH----HHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGA----EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs----~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
..+.+.+++++|++++|.+.+.|+++++ ++++.+++.+. ..+| +..|++|+++. +-|+.+.....+.+
T Consensus 566 ~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~----~~~G-d~~r~~vli~~-~aH~sn~a~a~~~G-- 637 (993)
T PLN02414 566 YQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYH----LSRG-DHHRNVCIIPV-SAHGTNPASAAMCG-- 637 (993)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHH----hccC-CCCCCEEEeCC-CcCccCHHHHHHCC--
Confidence 3455778999999999999999999988 66666666663 3335 22234555544 55888776655532
Q ss_pred cccccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 95 EAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..++.++++ |+++|+++++.+.++++++++..+++.+|...+ +++|.++||++|+++++|.
T Consensus 638 ----------~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDg 703 (993)
T PLN02414 638 ----------MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDG 703 (993)
T ss_pred ----------CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEe
Confidence 223333332 899999999866568999999999998998888 9999999999999999999
Q ss_pred ccc-CCcccccCcccccCCCCCcEEEec--cccc-----CCccchhhheeCHHHHhhcCCCC-----------CC---CC
Q 017259 170 IQS-GLARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-----------HG---ST 227 (374)
Q Consensus 170 a~~-~~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~G~~~~~~~~~~~~~~~~-----------~~---~~ 227 (374)
++. +.+ .......+..|++.+| |+|+ ||- .+|++..++++...+-... .. .+
T Consensus 704 Aq~~a~~-----~l~~p~~~GaD~~~~s~HK~f~~P~G~GGP-g~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt 777 (993)
T PLN02414 704 ANMNAQV-----GLTSPGFIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGT 777 (993)
T ss_pred cCHHhcc-----CcCCccccCCCEEEecCCccCCcCcccCCC-CeeeEEEchhhcccCCCCccccCCCcccccCCCCcCC
Confidence 996 221 1112223556888775 8666 344 5777877877654443110 00 11
Q ss_pred CC----CCHHHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHHHHHHHHHhCCCceeeEE--EEeeeEEEEeccCC--Cc
Q 017259 228 FG----GNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTA--LP 296 (374)
Q Consensus 228 ~~----~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~--~~ 296 (374)
.. ++...+.++..-++.+..+++ .++...+.+++.++|++.. +...... ...+=+.+.+...+ .+
T Consensus 778 ~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~----~~~~~~~~~~~~hEfv~~~~~l~~~~g 853 (993)
T PLN02414 778 ISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHY----PVLFRGKNGTCAHEFIIDLRPFKNTAG 853 (993)
T ss_pred ccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhC----CccccCCCCCeeeeEEEeccccccccC
Confidence 11 233455566666777666655 5667778888888887632 1221110 11111222232111 02
Q ss_pred hhHHHHHHHHHHCCeEeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCc
Q 017259 297 VSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 351 (374)
Q Consensus 297 ~~~~~~~~~l~~~Gi~v~~~---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 351 (374)
.+..++.++|++.||..... ..+++|++|+...+++|+|+++++|+.+.. +...
T Consensus 854 ~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~-e~~~ 910 (993)
T PLN02414 854 IEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRE-EIAD 910 (993)
T ss_pred CCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HHHH
Confidence 35688999999999876432 378999999999999999999999999998 7665
No 280
>PRK05968 hypothetical protein; Provisional
Probab=99.84 E-value=1e-19 Score=170.61 Aligned_cols=287 Identities=15% Similarity=0.075 Sum_probs=185.3
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...+|+++++++.|.+..++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 55 ~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al-----~~~G-----d~Vl~~~~~y~~t~~~~~~~~~ 124 (389)
T PRK05968 55 PIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSF-----VEPG-----DRIVAVRHVYPDAFRLFETILK 124 (389)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEeCCCchHHHHHHHHHHH
Confidence 34556778889999999999999888888899999999888776 5677 9999999998764322211110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.+|++++++++. ++++++++++.|+.+.+.+ +++|.++|++||+++|+|++|+
T Consensus 125 ~---------~G~~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a 187 (389)
T PRK05968 125 R---------MGVEVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWA 187 (389)
T ss_pred H---------cCceEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 112344445568899988773 5788999987777665555 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-C-ccchhhheeCHHHHhhcCCCCC-CCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADKEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G-~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.... ..+.. .+ .|++ |++|.++| | . ++|+++.++++++.++.... ......+++.++.++.+++.+
T Consensus 188 ~~~~-~~p~~---~g--~Divv~S~tK~l~g~~~~-~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl-- 258 (389)
T PRK05968 188 SPVF-QRPIT---LG--VDLVIHSASKYLGGHSDT-VAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL-- 258 (389)
T ss_pred chhc-cCchh---cC--CcEEEeeccccccCCCCe-EEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH--
Confidence 4311 11111 22 3544 77799985 3 4 67788888887776653211 112345666666666666544
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeE------------EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec-
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK- 314 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~- 314 (374)
....++..++..++.+.|+.. |.+.... .+.+.++.|.+++. ....+|++.|...++.++
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~----p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~---~~~~~f~~~L~~~~~~~s~ 331 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAH----PVVERVCHPALANHPPAGLSGTSGLFSFIFREG---IDVRAFADALKLFRLGVSW 331 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCccEEECCCCCCChHHhCCCCceEEEEEECCH---HHHHHHHHhCCccEEecCC
Confidence 223455555566666666543 2221111 13466888888642 267788888876654332
Q ss_pred --------cC------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 --------PT------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 --------~~------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|. ..+.+|+++++...+ .+++-|+++++
T Consensus 332 G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~----dl~~dl~~al~ 385 (389)
T PRK05968 332 GGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTE----ALWADLEQALA 385 (389)
T ss_pred CCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHH----HHHHHHHHHHH
Confidence 11 146899997765444 44444445544
No 281
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=1.3e-19 Score=168.72 Aligned_cols=294 Identities=10% Similarity=0.008 Sum_probs=188.9
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++..+|....|+++|+++.|.+.+++++||++|+..++..+ .++| |+|++.++.|++..........
T Consensus 42 ~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~al-----l~~G-----D~Vl~~~~~y~~t~~~~~~~~~ 111 (377)
T TIGR01324 42 LTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAF-----VKAG-----DHVLMVDSAYEPTRYFCDIVLK 111 (377)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHh-----cCCC-----CEEEEcCCCcHHHHHHHHHHHH
Confidence 33445678999999999999999999999999999999999887 5677 9999999999765332111000
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ...++..++..+.++++++++ +++++++++++.|++|.+.+ +++|+++|+++|+++|+|++|+
T Consensus 112 ~---------~gi~v~~~d~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 112 R---------MGVDITYYDPLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred h---------cCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 011223333334477888776 57999999999999998877 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--CccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
. +....+ .....|++ |++|.++| +. .+|+++.+++..+.+...........++..+......++.+..
T Consensus 176 ~-g~~~~p-----l~~gaDivv~S~tK~l~G~~d~-~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~- 247 (377)
T TIGR01324 176 A-GLLFKP-----LEHGVDISIQAGTKYLVGHSDI-MIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGV- 247 (377)
T ss_pred c-ccccCc-----cccCceEEEecCceeccCCCCc-eEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHH-
Confidence 2 111121 22345665 56799985 34 5677888877766655322222334456665555555554422
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
..++.+++..++.+.|++-.. .+|+... ...+.|.++.|.++... .....+|.+.|.-.++.++-
T Consensus 248 -R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-~~~~~~~~~~l~~~~~~~sl 325 (377)
T TIGR01324 248 -RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-QKQVHAFLDHLQLFGLGYSW 325 (377)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEeccC
Confidence 256666666667777665321 1121111 12255888888886411 12456677777654433211
Q ss_pred C-----------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 316 T-----------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 316 ~-----------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+ .++.+|++.++ |+.+.+++-|.++++
T Consensus 326 G~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 326 GGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred CCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence 1 13578998554 345556666666665
No 282
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.3e-19 Score=170.36 Aligned_cols=258 Identities=16% Similarity=0.134 Sum_probs=172.8
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...+|+++|+++.|.+..++++||++|+..++..+ .++| |+|++..++|.+.......+..
T Consensus 52 ~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~al-----l~pG-----D~Vvv~~p~Y~~t~~~~~~~~~ 121 (405)
T PRK08776 52 YDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNAL-----LQPG-----DTLVVPHDAYGGSWRLFNALAK 121 (405)
T ss_pred CcccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHH-----hCCC-----CEEEEccCCchHHHHHHHHHHH
Confidence 34566778889999999999998888888999999999988877 5667 9999999999763322211110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.. ...+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 122 ~~---------g~~v~~v~~~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a 185 (405)
T PRK08776 122 KG---------HFALITADLTDPRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFL 185 (405)
T ss_pred hc---------CcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCc
Confidence 00 12233444458899998886 47899999999999999887 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
..... .+ . ....|++ |.+|.++| +. .+|+++. ++++.+.+........+..+++.+.++...++.+.
T Consensus 186 ~~~~~-~p--l---~~gaDivv~S~tK~l~g~~~~-~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl~- 257 (405)
T PRK08776 186 SPALQ-KP--L---EFGADLVLHSTTKYINGHSDV-VGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTLD- 257 (405)
T ss_pred ccccC-Cc--c---cccCCEEEecCceeecCCCCc-eEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcHH-
Confidence 32111 11 1 2334555 66799985 34 5677665 56676666533233334568888888887777653
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
...++..++...+.+.|++... .+|+... ...+.|.++.|+++.+. ....+|++.|.
T Consensus 258 -~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~ 327 (405)
T PRK08776 258 -ARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGE--AAVRAFVDGLR 327 (405)
T ss_pred -HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCH--HHHHHHHHhCC
Confidence 3466777777777777765321 1111111 11355788888886421 12344555443
No 283
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=1.2e-18 Score=165.03 Aligned_cols=292 Identities=14% Similarity=0.175 Sum_probs=178.5
Q ss_pred CcHHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
+..+++++.+++++|.+ ++++++|++++++.++..+... +..+| |+|++.++.|++.......+... +...
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~-~~~~g-----d~Vi~~~~~~~s~~~~~~~~~~~-g~~~ 121 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHF-YQKKG-----KHIITSKTEHKAVLDTCRQLERE-GFEV 121 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHh-hcCCC-----CEEEEecCccHHHHHHHHHHHhC-CCEE
Confidence 34667889999988764 5999999999999998877422 13566 89999988875543332222110 1111
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
.+.+...+.. .|+++++++++ ++++++++..++|++|.+.+ +++|.++|+++|+++|+|++|+ ++..
T Consensus 122 ~~v~~~~~g~----~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~- 188 (404)
T PRK14012 122 TYLDPQSNGI----IDLEKLEAAMR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKV- 188 (404)
T ss_pred EEEccCCCCc----CCHHHHHHhcC---CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCc-
Confidence 0111101100 17899999887 57889999999999999998 9999999999999999999997 2211
Q ss_pred cCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCC-------CCCCCHHHHHHHHHHHHHHhh--
Q 017259 179 RMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS-------TFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 179 ~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~aa~~al~~~~~-- 247 (374)
..+.....+|+.++| |.++ +. ++|+++.+++....+.+...+. ....+.....+..++++....
T Consensus 189 ---~~~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~ 263 (404)
T PRK14012 189 ---PIDLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEM 263 (404)
T ss_pred ---ccCcccCCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhH
Confidence 111223457887666 9665 33 5678777765433443321111 112233334444455554432
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCcee--e-EEEEee--eEEEEeccCCCchhHHHHHHHHHHCCeEeccC------
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQQFPNYVK--E-VRGRGL--FNAVEFDKTALPVSAYDICLKMKERGILAKPT------ 316 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~-~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------ 316 (374)
++..++.+...+++.+.|+.+ +++.. . ....+. .+++.+. ..+++...|. ++.++.+
T Consensus 264 ~~~~~~~~~l~~~l~~~L~~~----~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~--~~~i~~g~~~~~~ 331 (404)
T PRK14012 264 ATENERIRALRDRLWNGIKDI----EEVYLNGDLEQRVPGNLNVSFNYV------EGESLIMALK--DLAVSSGSACTSA 331 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCEEEeCCccccCCCEEEEEEeCc------CHHHHHHhCC--CeEEEchhhhCCC
Confidence 234455555666666655442 22211 1 111111 2333332 2355666664 3333221
Q ss_pred -----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 317 -----------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 317 -----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
..+.+|++++..+|++|++++++.|+++++ .+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~-~~~ 381 (404)
T PRK14012 332 SLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIG-KLR 381 (404)
T ss_pred CCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHH
Confidence 137899999999999999999999999988 663
No 284
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.6e-19 Score=167.92 Aligned_cols=294 Identities=16% Similarity=0.191 Sum_probs=185.0
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.++++...+|+++|+++.|.+..+.++||++|+..++..+ .++| |+|++..+.|.+..........
T Consensus 53 ~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~al-----l~~G-----d~Vl~~~~~y~~t~~~~~~~~~ 122 (388)
T PRK07811 53 YEYARTGNPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAV-----LRPG-----DHIVIPNDAYGGTFRLIDKVFT 122 (388)
T ss_pred CcccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHH-----hCCC-----CEEEEcCCCchHHHHHHHHhCc
Confidence 34455778889999999999999888888899999999999888 5667 9999999998654322211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....+..++..|+++++++++ +++++|++++++|++|...+ +++|.++|+++|++||+|++|+
T Consensus 123 ---------~~gi~~~~~d~~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a 186 (388)
T PRK07811 123 ---------RWGVEYTPVDLSDLDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFA 186 (388)
T ss_pred ---------CCCeEEEEeCCCCHHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCC
Confidence 1112334444458999998886 57899999999999998887 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
... ...+. ....|++ |++|.++| |-.++|+++.+ +++.+.+...........+++.+..+...++.+.
T Consensus 187 ~~~-~~~p~-----~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl~-- 258 (388)
T PRK07811 187 SPY-LQQPL-----ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTLA-- 258 (388)
T ss_pred ccc-cCCch-----hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHH--
Confidence 321 11211 2234554 77799986 32156887765 5665655432222223345555544555554332
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe--
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA-- 313 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-- 313 (374)
...++..++...+.+.|++... .+|+... ...+.|.++.|+++... .....|.+.|.--.+.+
T Consensus 259 ~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--~~~~~f~~~l~~~~~~~s~ 336 (388)
T PRK07811 259 VRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGE--EAARDFCARTKVFTLAESL 336 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCH--HHHHHHHHhCCcceeeccC
Confidence 2355556677777777765321 1121111 12245788899886321 13444555443211111
Q ss_pred --------ccC--------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 --------KPT--------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 --------~~~--------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. .++.+|+++++ |+.+.+++.|.++++
T Consensus 337 G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 337 GGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred CCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 110 14689999554 355566666666664
No 285
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.83 E-value=1.6e-18 Score=164.50 Aligned_cols=294 Identities=15% Similarity=0.169 Sum_probs=189.0
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcc----cccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWG----YVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~----~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
.+...+|+++|+++++.+++++++||++|+..++.++.... ..++| |+||+..++|.+........+..+.
T Consensus 62 G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pG-----d~VIv~~~t~~a~~~~v~~~G~~pv 136 (438)
T PRK15407 62 GRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPG-----DEVITVAAGFPTTVNPIIQNGLVPV 136 (438)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCC-----CEEEECCCCcHHHHHHHHHcCCEEE
Confidence 45678899999999999999999999999999998774211 14566 9999999999766554443332221
Q ss_pred ccccCCCCCCCceeccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-C
Q 017259 96 AIRGFGPLLPGHLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G 173 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~ 173 (374)
..++....++ |++++++++. +++++++++++. |...+ +++|.++|++||++||+|++|+ |
T Consensus 137 --------~vdvd~~~~~id~~~le~~i~---~~tkaVi~~~~~---G~p~d----l~~I~~la~~~gi~vIeDaa~a~G 198 (438)
T PRK15407 137 --------FVDVELPTYNIDASLLEAAVS---PKTKAIMIAHTL---GNPFD----LAAVKAFCDKHNLWLIEDNCDALG 198 (438)
T ss_pred --------EEecCCCcCCcCHHHHHHHcC---cCCeEEEEeCCC---CChhh----HHHHHHHHHHCCCEEEEECccchh
Confidence 1222211222 7899998886 578999988754 33344 9999999999999999999998 3
Q ss_pred CcccccCcccccCCCCCcEEEec----ccccCCccchhhheeCH-HHHhhcCCC--------------------------
Q 017259 174 LARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLADK-EVMLCIQPG-------------------------- 222 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~G~~~~~~-~~~~~~~~~-------------------------- 222 (374)
-.+.|.. .|...|+.+|| |.+..|- +|+++.++ ++.+.++..
T Consensus 199 ~~~~g~~-----~G~~gd~~~fSf~~~k~~~~ge--GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T PRK15407 199 STYDGRM-----TGTFGDIATLSFYPAHHITMGE--GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLG 271 (438)
T ss_pred hhcCCee-----eeccCceEEEeCCCCCCccccC--ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccc
Confidence 2222321 11222555554 6666553 36666653 444322100
Q ss_pred -------------CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH--hCCCceeeEEEEeeeEE
Q 017259 223 -------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ--QFPNYVKEVRGRGLFNA 287 (374)
Q Consensus 223 -------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~g~~~~ 287 (374)
..+.++.++.+.++.+++.|+.+ +++.++.+++.+++.+.|..+.. .+|............+.
T Consensus 272 ~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK15407 272 ELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFP 349 (438)
T ss_pred cccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEE
Confidence 12345567888888888888876 34577778888888888865421 11111112222223334
Q ss_pred EEeccCCCchhHHHHHHHHHHCCeEeccC-----C-----------------------CCEEEEecCCCCCHHHHHHHHH
Q 017259 288 VEFDKTALPVSAYDICLKMKERGILAKPT-----H-----------------------DTIVRLTPPLSISSNELQEGSK 339 (374)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-----~-----------------------~~~lRi~~~~~~~~e~i~~~~~ 339 (374)
+.++.. .+.+.+++.+.|.++||.++.. + ...+-+-++...+++|++.+++
T Consensus 350 i~~~~~-~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~ 428 (438)
T PRK15407 350 ITVKED-AGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIE 428 (438)
T ss_pred EEECCc-CCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHH
Confidence 444332 1225789999999999976421 0 1224444445679999999999
Q ss_pred HHHHHHh
Q 017259 340 ALHDVLE 346 (374)
Q Consensus 340 ~l~~~~~ 346 (374)
+|+++++
T Consensus 429 ~i~~~~~ 435 (438)
T PRK15407 429 KIEEFFG 435 (438)
T ss_pred HHHHHHh
Confidence 9998875
No 286
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.7e-19 Score=166.77 Aligned_cols=245 Identities=14% Similarity=0.110 Sum_probs=163.5
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++....|+++|+++.|.+++++++||++|+..++..+ .++| |+|++..++|.+..........
T Consensus 45 ~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~al-----l~~G-----d~Il~~~~~y~~~~~~~~~~~~ 114 (388)
T PRK08861 45 YDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSAL-----LGPD-----DLIVAPHDCYGGTYRLFNTRAN 114 (388)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHH-----cCCC-----CEEEEcCCchHHHHHHHHHHHh
Confidence 44667889999999999999999999999999999999999887 4667 9999999998654322211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+ ..+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 115 ~~g---------i~v~~vd~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 115 KGD---------FKVQFVDQSDAAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred cCC---------eEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcc
Confidence 001 1223333357899988886 57899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
.... ..+ .....|++ |.+|.++| +. .+|+++.+ +++.+.++..........+++.+...+..++-+.-
T Consensus 179 ~~~~-~~p-----l~~GaDivv~S~tK~l~G~~d~-~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~l 251 (388)
T PRK08861 179 TPVL-QKP-----LELGADFVIHSTTKYINGHSDV-IGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGA 251 (388)
T ss_pred cccc-CCC-----cccCCCEEEeecceeccCCCcc-eeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHH
Confidence 3211 111 12345655 66799986 34 56777664 45666554322223334566666655555543322
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEecc
Q 017259 248 EKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDK 292 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~ 292 (374)
..++..++...+.+.|+.-.. .+|+... ...+.|.++.|+++.
T Consensus 252 --R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 252 --RMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred --HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 245556666666666664311 1121111 123467788888863
No 287
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.7e-19 Score=168.69 Aligned_cols=294 Identities=14% Similarity=0.105 Sum_probs=184.7
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++...+|++++++++|.+++++++||++|+..++..+ .++| |+|++..+.|++.......+.
T Consensus 45 ~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~l-----l~~G-----D~Vlv~~~~y~~~~~~~~~~~- 113 (385)
T PRK08574 45 LKYSREENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSL-----LKAG-----DRVVLPMEAYGTTLRLLKSLE- 113 (385)
T ss_pred ceEECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHH-----hCCC-----CEEEEcCCCchhHHHHHHHhh-
Confidence 33456778999999999999999999999999999999999877 5667 999999999876543332221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+ ..+..+. .|++++++++++ .++++++++++.|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 114 ~~g---------~~v~~~~-~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a 177 (385)
T PRK08574 114 KFG---------VKVVLAY-PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFA 177 (385)
T ss_pred ccC---------cEEEEEC-CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCC
Confidence 000 1122222 268889888873 17899999999999999998 9999999999999999999996
Q ss_pred -CCcccccCcccccCCCCCcEEEecccccC-Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 017259 173 -GLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 249 (374)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~ 249 (374)
++.. .+. ..+.+.-+.|++|.++| |-.-.|+++. ++++.+.++..........+++.+..++..++.+. .
T Consensus 178 ~~~~~--~~l---~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL~--~ 250 (385)
T PRK08574 178 TPLLY--RPL---RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTLE--V 250 (385)
T ss_pred ccccC--Chh---hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHH--H
Confidence 3211 111 12222223478899985 4302353444 66776665533222334456666666666665543 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----hCCCceee---------E--EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe-
Q 017259 250 LAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------V--RGRGLFNAVEFDKTALPVSAYDICLKMKERGILA- 313 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~--~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v- 313 (374)
..++..++..++.+.|+.... .+|+.... . .+.|.++.|+++... ....+|++.|.--.+.+
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~--~~~~~~~~~l~l~~~~~s 328 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGR--DAVLKFLRSLKLIKPSPS 328 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCH--HHHHHHHHcCCcceEccC
Confidence 355555677777776654321 12221111 1 136788888886321 13444555443211111
Q ss_pred ---------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ---------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ---------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.+|++.++ |+.+.+++-|.++++
T Consensus 329 ~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~ 383 (385)
T PRK08574 329 LGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALG 383 (385)
T ss_pred CCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 110 14689999553 455666777777665
No 288
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.83 E-value=2.5e-18 Score=163.64 Aligned_cols=285 Identities=15% Similarity=0.138 Sum_probs=173.4
Q ss_pred HHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccc--cccCCccccccCCCCCC
Q 017259 29 RLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAI--SMSCDNEAIRGFGPLLP 105 (374)
Q Consensus 29 ~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~--~~~~~~~~~~~~~~~~~ 105 (374)
.+++++|.+.. ++.+||++|+..++..+ .++| |+|++..++|.+...... ..... .......+...
T Consensus 79 ~la~~~g~~~~~i~~~sgt~al~~~l~~l-----~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~ 147 (416)
T PRK00011 79 RAKELFGAEYANVQPHSGSQANAAVYFAL-----LKPG-----DTILGMDLAHGGHLTHGSPVNFSGK-LYNVVSYGVDE 147 (416)
T ss_pred HHHHHhCCCceeeecCCchHHHHHHHHHh-----cCCC-----CEEEEeccccCCccccccccccccc-eeeEeecCcCc
Confidence 77888877644 44467899999888877 5677 999999999865432211 11110 01100111100
Q ss_pred CceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCcccccCcccc
Q 017259 106 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASD 184 (374)
Q Consensus 106 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~~~~~~ 184 (374)
.. -..|+++++++++++ +++++++... +.|...+ +++|.++|++||+++|+|++|+ |+...|.. . .
T Consensus 148 --~~-~~~d~~~l~~~i~~~--~~k~v~~~~~--~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~-~-~ 214 (416)
T PRK00011 148 --ET-GLIDYDEVEKLALEH--KPKLIIAGAS--AYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVH-P-S 214 (416)
T ss_pred --cc-CCcCHHHHHHHHHhc--CCCEEEECCC--cCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCcc-C-C
Confidence 00 012799999998743 5677777532 3355556 9999999999999999999986 33222211 1 1
Q ss_pred cCCCCCcEE--EecccccCCccchhhheeC-HHHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHH-Hhh--hcHHHHHHHH
Q 017259 185 WEEVRPDMV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFG-GNPLASAVAIASLDV-IRD--EKLAERSAHL 257 (374)
Q Consensus 185 ~~~~~~d~~--s~sK~~~~G~~~~G~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~-~~~--~~~~~~~~~~ 257 (374)
..+ ..|++ |++|++ +|. ++|+++++ +++.+.++.......++ +....++++..++.. ..+ +++.++++++
T Consensus 215 ~~~-~~di~~~S~~K~l-~g~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~ 291 (416)
T PRK00011 215 PVP-HADVVTTTTHKTL-RGP-RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKN 291 (416)
T ss_pred CCC-CCcEEEecCCcCC-CCC-CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 111 34544 778998 456 78898885 67777765432222222 223333333333333 221 3467777888
Q ss_pred HHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc----C------CCCEEEEecC-
Q 017259 258 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T------HDTIVRLTPP- 326 (374)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~----~------~~~~lRi~~~- 326 (374)
++++++.|++++.. +.. ....++++++.+++.. .+..++.+.|.++||.++. . .+..+|++..
T Consensus 292 ~~~l~~~L~~~g~~---~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~ 365 (416)
T PRK00011 292 AKALAEALAERGFR---VVS-GGTDNHLVLVDLRSKG--LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPA 365 (416)
T ss_pred HHHHHHHHHhCCCe---eee-cCCCCeEEEEeCcccC--CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHH
Confidence 88888888764211 111 1123477777764321 1467899999999999973 2 1456899542
Q ss_pred ---CCCCHHHHHHHHHHHHHHHh
Q 017259 327 ---LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ---~~~~~e~i~~~~~~l~~~~~ 346 (374)
..++++|++++++.|++++.
T Consensus 366 ~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 366 ITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred HhhcCcCHHHHHHHHHHHHHHHh
Confidence 25679999999999999887
No 289
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.83 E-value=3.7e-18 Score=163.97 Aligned_cols=281 Identities=19% Similarity=0.168 Sum_probs=170.1
Q ss_pred HHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCC
Q 017259 26 FAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPL 103 (374)
Q Consensus 26 l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 103 (374)
+.+++++++|.+ ++++++|++++++.++.++. ..+| ++|++.++.|..+......+....+......+.
T Consensus 117 ~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~----~~~g-----~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 117 YQTMICELTGMDVANASMYDGATALAEAALMAVR----ITKR-----KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH----hcCC-----CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 446678877654 78899999999988887764 2455 899999887644433322211000111000111
Q ss_pred CCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE--eccccCCcccccCc
Q 017259 104 LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLARSGRML 181 (374)
Q Consensus 104 ~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~--Dea~~~~~~~g~~~ 181 (374)
..+ .-|+++++++++ +++++++++++ |++|.+.+ +++|.++|+++|+++++ |.+..+. ..
T Consensus 188 ~~~-----~~d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-----~~ 249 (447)
T PRK00451 188 EDG-----VTDLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-----LK 249 (447)
T ss_pred CCC-----CCCHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc-----CC
Confidence 111 127899988886 57899988876 78999988 99999999999999998 5443221 10
Q ss_pred ccccCCCCCcEEE-----eccccc-CCccchhhheeCHHHHhhcCCC---------------------------CCC-CC
Q 017259 182 ASDWEEVRPDMVI-----LGKALG-GGVIPVSAVLADKEVMLCIQPG---------------------------EHG-ST 227 (374)
Q Consensus 182 ~~~~~~~~~d~~s-----~sK~~~-~G~~~~G~~~~~~~~~~~~~~~---------------------------~~~-~~ 227 (374)
. ...+..|+++ +||.+. +|+ ++|+++.++++.+.+.+. ... .+
T Consensus 250 ~--~~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (447)
T PRK00451 250 P--PGEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSN 326 (447)
T ss_pred C--cccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccccccc
Confidence 1 1123456653 456554 678 899998888887774211 000 11
Q ss_pred CCCCHHHH-HHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHH
Q 017259 228 FGGNPLAS-AVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 303 (374)
Q Consensus 228 ~~~~~~~~-~aa~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (374)
++.+...+ .++..+++.+.+ ++..++++++++++.+.|+++. ++.........++.+.++ . +..+++
T Consensus 327 ~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~----g~~~~~~~~~~~~~v~~~--~---~~~~~~ 397 (447)
T PRK00451 327 ICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIG----GVELFDGPFFNEFVVRLP--K---PAEEVN 397 (447)
T ss_pred ccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcC----CEEecCCCeEEEEEEecC--C---CHHHHH
Confidence 12222222 233334443333 2455666667777777776542 111111111111223332 1 468899
Q ss_pred HHHHHCCeEec----cC---CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 304 LKMKERGILAK----PT---HDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 304 ~~l~~~Gi~v~----~~---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
++|.++|+++. +. ..+++|++++..+|+++++++++.|++++
T Consensus 398 ~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 398 EALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99999988742 11 14689999998899999999999998765
No 290
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.83 E-value=1.1e-18 Score=162.46 Aligned_cols=284 Identities=15% Similarity=0.101 Sum_probs=181.0
Q ss_pred cCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 14 SSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.+++|+++...+|+++|+++. .+++++++||++|+..++..+ .++| |+|++..++|++....+......
T Consensus 44 ~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~al-----l~~G-----d~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 44 TYGRASNPTWRALEAALGELE-GAEALVFPSGMAAITAVLRAL-----LRPG-----DTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eeECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHh-----cCCC-----CEEEEeCCCcHhHHHHHHHHHhc
Confidence 345678999999999999998 567788899999999888776 5677 99999999997764433211100
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
....+..++.++.. + .+. ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|..
T Consensus 113 ---------~G~~v~~v~~~~~~--~-~~~---~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~ 173 (366)
T PRK07582 113 ---------LGVTVREAPTAGMA--E-AAL---AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTAT 173 (366)
T ss_pred ---------CeEEEEEECCCChH--H-Hhc---cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCC
Confidence 01223444443322 1 222 47899999999999998887 99999999999999999999852
Q ss_pred CcccccCcccccCCCCCcEE--EecccccC--Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 174 LARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
. .+.. .. ....|++ |++|.++| |. ++||++. ++++.+.+...........+++.+..+...++.+.
T Consensus 174 ~--~~~~-p~---~~g~Divv~S~sK~l~G~~g~-~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~-- 244 (366)
T PRK07582 174 P--LGQR-PL---ELGADLVVASDTKALTGHSDL-LLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLG-- 244 (366)
T ss_pred c--cccC-ch---hcCCcEEEecccccccCCCCe-eEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHH--
Confidence 1 1111 11 1234554 77899975 66 8899887 46777766543222233456677666665555332
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHh----CCCceeeE---------EEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQ----FPNYVKEV---------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
-..++..++...+.+.|++.... +|+..... .+.|.++.|++++ ..+..+.+...++....
T Consensus 245 ~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~------~~~~~~~~~~l~~~~~~ 318 (366)
T PRK07582 245 LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD------AAAAERFVAASRLVVAA 318 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC------HHHHHHHHHhCCcceec
Confidence 23466667777777777754311 11111111 1357788888852 34455555555554420
Q ss_pred -------------------CCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 316 -------------------THDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 316 -------------------~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
..++.||+++++...++.++.+.++|+
T Consensus 319 ~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 319 TSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 114689999777665555555555443
No 291
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.83 E-value=2.9e-18 Score=161.24 Aligned_cols=306 Identities=15% Similarity=0.153 Sum_probs=190.8
Q ss_pred hHHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC
Q 017259 2 KALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH 81 (374)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh 81 (374)
+++.+.+..... ...+...++++.+++++|.++.++++||++|+..++..+. .++| |+|+++.++|+
T Consensus 14 ~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~----~~~G-----d~Viv~~~~~~ 80 (380)
T TIGR03588 14 DAVVEVLKSDFL----TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALG----VGPG-----DRVWTTPITFV 80 (380)
T ss_pred HHHHHHHhcCCc----cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcC----CCCC-----CEEEeCCcchH
Confidence 345555544432 2356688899999999998988889999999999998773 4667 99999999987
Q ss_pred CcccccccccCCccccccCCCCCCCceeccC-CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS 159 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~ 159 (374)
+........+..+.+. ++..-.+ .|++++++.+++.+ ++++++++.+ .+|...+ +++|.++|+
T Consensus 81 ~~~~~~~~~G~~~~~~--------~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~~ 145 (380)
T TIGR03588 81 ATANCALYCGAKVDFV--------DIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALAK 145 (380)
T ss_pred HHHHHHHHcCCEEEEE--------ecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHHH
Confidence 6543333222222111 1100011 27899999887421 3577777544 3576666 999999999
Q ss_pred hcCCEEEEeccccC-CcccccCcccccCCC--CCcEEEec----ccccCCccchhhhee-CHHHHhhcCCC---------
Q 017259 160 KYNILMIADEIQSG-LARSGRMLASDWEEV--RPDMVILG----KALGGGVIPVSAVLA-DKEVMLCIQPG--------- 222 (374)
Q Consensus 160 ~~~i~li~Dea~~~-~~~~g~~~~~~~~~~--~~d~~s~s----K~~~~G~~~~G~~~~-~~~~~~~~~~~--------- 222 (374)
+||++||+|++|+. ....+.. .+. ..|+.++| |.++.| .+|+++. ++++.+.++..
T Consensus 146 ~~~~~lI~D~a~a~g~~~~~~~-----~g~~~~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~ 218 (380)
T TIGR03588 146 KHGLKIIEDASHALGAEYGGKP-----VGNCRYADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITKDP 218 (380)
T ss_pred HcCCEEEEECCCcccCccCCEe-----CCCccccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCCCc
Confidence 99999999999982 2122221 122 23665444 777644 3444554 45555544311
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCcee-eEEEEeee
Q 017259 223 ----------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLF 285 (374)
Q Consensus 223 ----------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~g~~ 285 (374)
..+..+.++.+..+.+++.|+.+ +.+.++.+++.+++.+.|..+....+.... .......+
T Consensus 219 ~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 296 (380)
T TIGR03588 219 LLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHL 296 (380)
T ss_pred ccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEE
Confidence 01223444666666666666654 446777778888888888765311100000 11112233
Q ss_pred EEEEeccCCCchhHHHHHHHHHHCCeEeccC----C---------------------CCEEEEecCCCCCHHHHHHHHHH
Q 017259 286 NAVEFDKTALPVSAYDICLKMKERGILAKPT----H---------------------DTIVRLTPPLSISSNELQEGSKA 340 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~----~---------------------~~~lRi~~~~~~~~e~i~~~~~~ 340 (374)
+.+.++.. .+.+.+++.+.|.++||.++.. + ...+++.++...+++|++.++++
T Consensus 297 ~~i~~~~~-~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~ 375 (380)
T TIGR03588 297 YPILLDQE-FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVET 375 (380)
T ss_pred EEEEECCc-CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHH
Confidence 33334321 1126889999999999987521 0 25678877788899999999999
Q ss_pred HHHHH
Q 017259 341 LHDVL 345 (374)
Q Consensus 341 l~~~~ 345 (374)
|++++
T Consensus 376 l~~~~ 380 (380)
T TIGR03588 376 LRKVL 380 (380)
T ss_pred HHHhC
Confidence 98764
No 292
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=5.9e-19 Score=166.78 Aligned_cols=293 Identities=17% Similarity=0.183 Sum_probs=186.6
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++...+|+++|+++.|.+..++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 50 ~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al-----~~~G-----d~Vl~~~~~Y~~t~~~~~~~l~ 119 (425)
T PRK06084 50 NIYTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTI-----AEAG-----DNIVSVAKLYGGTYNLLAHTLP 119 (425)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHH-----hCCC-----CEEEEeCCCcchHHHHHHHhcc
Confidence 44566778999999999999999889999999999999999988 4567 9999999999764432221100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|++||++||+|++|+
T Consensus 120 ---------~~gi~v~~~d~~d~e~le~ai~---~~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a 183 (425)
T PRK06084 120 ---------RIGIETRFAAHDDIAALEALID---ERTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVA 183 (425)
T ss_pred ---------cceeEEEEECCCCHHHHHHHhc---cCCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0112334455568999999987 47899999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccchhhhee-CHHH--Hh---hc---CC-------------------
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEV--ML---CI---QP------------------- 221 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~-~~~~--~~---~~---~~------------------- 221 (374)
.. ... .......|++ |++|.++| |. ++|+++. +... .+ .. ..
T Consensus 184 ~~-~~~-----~p~~~gaDivv~S~tK~l~G~g~-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 256 (425)
T PRK06084 184 TP-VLC-----RPFEHGADIVVHSLTKYIGGHGT-SIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAF 256 (425)
T ss_pred cc-ccC-----ChhhcCCCEEEECchhccccccc-ceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHH
Confidence 22 111 1122345655 77899986 66 7776554 3221 11 00 00
Q ss_pred -------CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------EEE
Q 017259 222 -------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------VRG 281 (374)
Q Consensus 222 -------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~~~ 281 (374)
...+.....+++.+..++..++-+. ...++..++..++.+.|+.... .+|+.... ..+
T Consensus 257 ~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g 334 (425)
T PRK06084 257 IGRCRVVPLRNMGAALSPFNAFLILQGLETLA--LRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGG 334 (425)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCC
Confidence 0012233446666555555555442 3466666777777777776421 11211110 123
Q ss_pred -EeeeEEEEeccCCCchhHHHHHHHHHHCCeEe----------ccC-----------------CCCEEEEecCCCCCHHH
Q 017259 282 -RGLFNAVEFDKTALPVSAYDICLKMKERGILA----------KPT-----------------HDTIVRLTPPLSISSNE 333 (374)
Q Consensus 282 -~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v----------~~~-----------------~~~~lRi~~~~~~~~e~ 333 (374)
.|.++.|+++.+. ....+|++.|.--.+.+ .|. ..+.+|++.++ ||
T Consensus 335 ~~gg~~s~~~~~~~--~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed 408 (425)
T PRK06084 335 KPASILSFGIKGGQ--AAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EH 408 (425)
T ss_pred CcceEEEEEecCCH--HHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CC
Confidence 4778888886431 12344555543222111 110 14789999443 45
Q ss_pred HHHHHHHHHHHHh
Q 017259 334 LQEGSKALHDVLE 346 (374)
Q Consensus 334 i~~~~~~l~~~~~ 346 (374)
.+.+++-|.++++
T Consensus 409 ~~dLi~dl~~Al~ 421 (425)
T PRK06084 409 IDDIIADLAQALD 421 (425)
T ss_pred HHHHHHHHHHHHH
Confidence 6667777777776
No 293
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=3.4e-19 Score=168.74 Aligned_cols=168 Identities=18% Similarity=0.161 Sum_probs=127.4
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.++...+|+++|+++.|.+.+++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 49 ~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l-----~~~G-----d~Vl~~~~~y~~t~~~~~~~~~ 118 (418)
T TIGR01326 49 NIYSRLMNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNL-----AQAG-----DNIVSSSYLYGGTYNLFKHTLK 118 (418)
T ss_pred ceeECCCChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHH-----hCCC-----CEEEEECCCcHHHHHHHHHHHH
Confidence 33566788999999999999999999999999999999999887 4567 9999999998664322211110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.+|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 119 ~---------~G~~v~~v~~~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 119 R---------LGIEVRFVDPDDPEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred H---------cCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 112244445568999999887 57899999999999999888 9999999999999999999996
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeCH
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADK 213 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~~ 213 (374)
.. . ........+|++ |++|.++| |+ ++|+++.+.
T Consensus 183 ~~-~-----~~~~l~~g~Divv~S~sK~l~g~G~-~lGg~v~~~ 219 (418)
T TIGR01326 183 TP-Y-----LCRPIDHGADIVVHSATKYIGGHGT-AIGGVIVDG 219 (418)
T ss_pred hh-h-----cCCchhcCCeEEEECccccccCCcc-ceEEEEEec
Confidence 21 1 111122345655 78899997 88 999977754
No 294
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=6.5e-19 Score=164.08 Aligned_cols=257 Identities=11% Similarity=0.053 Sum_probs=165.2
Q ss_pred CcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 15 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 15 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
+++..++....|++.++++.+.+.+++++||++|+..++..+ .++| |+|++.++.|.+..........
T Consensus 55 Y~r~~npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~al-----l~~G-----D~Vvv~~~~Y~~t~~l~~~~l~-- 122 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSF-----LKAG-----DHLLMVDSCYEPTRDLCDKILK-- 122 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEECCCcHHHHHHHHHhhh--
Confidence 445557788899999999988888999999999999999877 5667 9999999998665432211110
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.....+..++..+.+.++++++ +++++++++++.|++|.+.+ +++|+++|++||+++++|++|+..
T Consensus 123 -------~~Gi~v~~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~p 188 (394)
T PRK09028 123 -------GFGIETTYYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWASP 188 (394)
T ss_pred -------hcceEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCcccc
Confidence 0112233344446678888876 57999999999999998877 999999999999999999999732
Q ss_pred cccccCcccccCCCCCcEE--EecccccC--CccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcH
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 250 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~ 250 (374)
.......+.+|++ |.+|.++| .. -.|+++.++++.+.+...........+++.+..+...++-+.- .
T Consensus 189 ------~~~~Pl~~GaDivv~S~tK~l~Gh~d~-~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~l--R 259 (394)
T PRK09028 189 ------INSRPFEMGVDISIQAATKYIVGHSDV-MLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGV--R 259 (394)
T ss_pred ------ccCCccccCceEEEEeCCeEecCCCCE-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--H
Confidence 1122223456765 66799986 34 5566666666655554221222234566666666655554322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 251 AERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
.++..++...+.+.|++-.. .+|+... ...+.|.++.|++++.. ......|.+.|.
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~~~f~~~l~ 328 (394)
T PRK09028 260 LAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-PKAVTALVEGMQ 328 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCC
Confidence 45555666666666655321 1121111 12245788888886321 112344555543
No 295
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.9e-18 Score=144.41 Aligned_cols=272 Identities=16% Similarity=0.188 Sum_probs=176.3
Q ss_pred CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCC--
Q 017259 36 YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-- 113 (374)
Q Consensus 36 ~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 113 (374)
.++++..-|+.|.+++.++... .||.++|+..+|+|.-++..+. .-+ ..++.+|.+
T Consensus 86 ~dnic~GvGsDE~ID~iiR~~c---------~PGkeKIl~cPPtysMY~v~A~-iNd------------~eVvkvpl~pd 143 (375)
T KOG0633|consen 86 SDNICVGVGSDELIDLIIRCVC---------DPGKEKILDCPPTYSMYVVDAA-IND------------AEVVKVPLNPD 143 (375)
T ss_pred ccceEEecCcHHHHHHHHhhee---------cCCccceeecCCcceeEEEEee-cCC------------ceEEEecCCCC
Confidence 4689999999999999999884 3345999999999965543322 111 223333332
Q ss_pred ---CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCC
Q 017259 114 ---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 190 (374)
Q Consensus 114 ---d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~ 190 (374)
+.+++.+.++.. ++++.+++.++.|++|.+. +.+.+++|.+.- -+.++++||+|.+|. |......+...+|
T Consensus 144 F~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p--~nglVVvDEAYidFs--g~~S~~~lV~kYp 217 (375)
T KOG0633|consen 144 FSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSII-KEDDILKILEMP--DNGLVVVDEAYIDFS--GVESRMKLVKKYP 217 (375)
T ss_pred ccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccc-cHHHHHHHHhCC--CCcEEEEeeeeEeec--cccccchHhHhCC
Confidence 788888877642 5899999999999999998 555555554432 379999999999884 3222333344577
Q ss_pred cEE---Eeccccc-CCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q 017259 191 DMV---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF 266 (374)
Q Consensus 191 d~~---s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~ 266 (374)
+++ ++||++| +|+ |+|+.+.+.++.+-+.. ...+|..+..+..+|++++..-. .+..+..++...+-+++|-
T Consensus 218 NLivlqTlSKsfGLAGi-RvG~~~~~~~ia~iln~--~KaPYNiS~~~s~~AL~Als~~n-~kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 218 NLIVLQTLSKSFGLAGI-RVGYGAFPLSIAEILNR--AKAPYNISVAGSVAALAALSDSN-GKKMEDVRDAIVRERERLF 293 (375)
T ss_pred ceeehhhhhhhcCccee-EeecccccHHHHHHHHh--ccCCccccchhHHHHHHhcCccc-chHHHHHHHHHHHHHHHHH
Confidence 766 8999999 799 99999999888777764 33456666667667777665211 1222233333333333333
Q ss_pred HHHHhCCCceee--EEEEeeeEEEEeccCCCchhHHHHHHH-HHHCCeEeccC-----CCCEEEEecCCCCCHHHHHHHH
Q 017259 267 KIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLK-MKERGILAKPT-----HDTIVRLTPPLSISSNELQEGS 338 (374)
Q Consensus 267 ~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~-----~~~~lRi~~~~~~~~e~i~~~~ 338 (374)
.....+| +..+ .....+|+.+++.+...+ .+..+..+ +...||+++.. ..+++||+ ..++|+..-++
T Consensus 294 keLt~v~-~~~~~~gg~daNFiLi~v~~~~n~-~akkly~q~at~~gVvVRfrgse~~c~G~lRit---vGt~EentvL~ 368 (375)
T KOG0633|consen 294 KELTEVP-FLNDYPGGSDANFILIEVTGGDNG-MAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT---VGTPEENTVLM 368 (375)
T ss_pred HHhhcCc-cccCCCCcccccEEEEEEcCCCcH-HHHHHHHHHHHhcceEEEEcCCccccceeEEEE---cCCcccchHHH
Confidence 3332222 2221 223467777777543211 23444444 45679999864 36899998 66888888899
Q ss_pred HHHHHH
Q 017259 339 KALHDV 344 (374)
Q Consensus 339 ~~l~~~ 344 (374)
+.|+..
T Consensus 369 k~~K~~ 374 (375)
T KOG0633|consen 369 KCLKQF 374 (375)
T ss_pred HHHHhh
Confidence 888765
No 296
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.81 E-value=8.7e-18 Score=167.16 Aligned_cols=310 Identities=14% Similarity=0.149 Sum_probs=196.5
Q ss_pred CCcHHHHHHHHhcccCCCeEEecC-ChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMN-TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~-~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.+...++++.+++++|.+.+-+.+ +|+++..+++++++.|+ ..+| +.+|++|++.... |+.+.......+
T Consensus 542 lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh-~~~G-e~~r~~vLIp~sa-HgtNpasa~~~G------ 612 (954)
T PRK12566 542 RAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYH-RSRG-QSQRDICLIPSSA-HGTNPASAQMAG------ 612 (954)
T ss_pred HHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHH-HhcC-CCCCCEEEecccc-cccCHHHHHHCC------
Confidence 445668999999999999875554 78888889999998876 6677 4556777776655 666554433222
Q ss_pred cCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-
Q 017259 99 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS- 172 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~- 172 (374)
..++.++++ |+++|++++++++++++++++..+++.++...+ +++|+++||++|.++++|.++.
T Consensus 613 ------ieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~~ 682 (954)
T PRK12566 613 ------MRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANLN 682 (954)
T ss_pred ------CEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeChh
Confidence 223333332 899999999866678888888776655554444 9999999999999999999986
Q ss_pred CCcccccCcccc-cCCCCCcEEEec--ccccC-----CccchhhheeCHHHHhhcCCCC-------------CCCCCCCC
Q 017259 173 GLARSGRMLASD-WEEVRPDMVILG--KALGG-----GVIPVSAVLADKEVMLCIQPGE-------------HGSTFGGN 231 (374)
Q Consensus 173 ~~~~~g~~~~~~-~~~~~~d~~s~s--K~~~~-----G~~~~G~~~~~~~~~~~~~~~~-------------~~~~~~~~ 231 (374)
+.. ... ...+..|++.++ |++++ |. .+|.+...+++...+.... ......++
T Consensus 683 a~~------~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP-~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gs 755 (954)
T PRK12566 683 AQV------GLARPADIGADVSHMNLHKTFCIPHGGGGP-GMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGS 755 (954)
T ss_pred hcc------CCCChhhcCCCEEEecCCcccCcCccCCCC-ccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccch
Confidence 221 111 123567888776 87762 33 4455555554444433210 11112334
Q ss_pred HHHHHHHHHHHHHHhhhcHHHHH---HHHHHHHHHHHHHHHHhCCCceeeEE--EEeeeEEEEeccCC--CchhHHHHHH
Q 017259 232 PLASAVAIASLDVIRDEKLAERS---AHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTA--LPVSAYDICL 304 (374)
Q Consensus 232 ~~~~~aa~~al~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~--~~~~~~~~~~ 304 (374)
...+.+++.-++.+..+ +.+.. ..+.+++.++|.+. + +...... ...+=+.+.+...+ .+.+..++.+
T Consensus 756 a~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~---~-~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvak 830 (954)
T PRK12566 756 ASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA---F-PVLYRGRNERVAHECILDLRPLKAQTGISEEDVAK 830 (954)
T ss_pred HHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh---C-CCCcCCCCCCeeeEEEEEccccccccCCCHHHHHH
Confidence 34445555556666555 32222 34677888888663 2 2222110 11111222222111 1236788999
Q ss_pred HHHHCCeEeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCC--CCCCCCC
Q 017259 305 KMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK--PKPADAP 361 (374)
Q Consensus 305 ~l~~~Gi~v~~~---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~--~~~~~~~ 361 (374)
+|++.||..... ..+++|++|+...+++|+|+++++|+.+.+ +...++. ++..|||
T Consensus 831 RL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~-e~~~v~~g~~~~~~n~ 891 (954)
T PRK12566 831 RLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRA-EIGKVQEGNWPAEDNP 891 (954)
T ss_pred HHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HHHHHHcCCCCcccCc
Confidence 999988876432 378999999999999999999999999998 7665544 5555553
No 297
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.8e-18 Score=162.25 Aligned_cols=289 Identities=13% Similarity=0.102 Sum_probs=180.1
Q ss_pred cCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 14 SSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++...++...+++++|+++.|.+..+.++||+.|+..++. + .++| |+|++.++.|++...........
T Consensus 47 ~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~-----l~~G-----d~Vlv~~~~y~~~~~~~~~~~~~ 115 (390)
T PRK08064 47 DYSRSGNPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-L-----LSKG-----DHVLISEDVYGGTYRMITEVLSR 115 (390)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-H-----hCCC-----CEEEEccCccchHHHHHHHHHHH
Confidence 34456688899999999999988888888999999988875 3 4567 99999999987654332211100
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
....+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 116 ---------~G~~v~~v~~~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~ 179 (390)
T PRK08064 116 ---------FGIEHTFVDMTNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLT 179 (390)
T ss_pred ---------cCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCc
Confidence 113344555568888988886 57899999999999999998 99999999999999999999874
Q ss_pred CcccccCcccccCCCCCcEE--EecccccC--Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 174 LARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
+.. ..+ .....|++ |++|.++| |. -.|+++. ++++.+.++..........++..+..+...++.+ .
T Consensus 180 ~~~-~~~-----~~~g~Divv~S~tK~~~G~~~~-laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl--~ 250 (390)
T PRK08064 180 PLL-QKP-----LDLGADVVLHSATKFLAGHSDV-LAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTL--H 250 (390)
T ss_pred ccc-cCc-----hhhCCcEEEeecceeccCCccc-eeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH--H
Confidence 311 111 12234555 67799875 32 3455555 4677777664333233333444433333333222 1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE---
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL--- 312 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~--- 312 (374)
...++..++..++.+.|+.... .+|+... ...+.|.++.|++++ ..++.+.+...+++
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~------~~~~~~f~~~l~l~~~~ 324 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS------EEAVRQFVSHVKLPVFA 324 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC------HHHHHHHHHhCCcceEc
Confidence 2244555566666666654321 1111110 123567788888853 22344444444541
Q ss_pred eccC---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 313 AKPT---------------------------HDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 313 v~~~---------------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
++-+ .++.+|+++++...++.++.+.++|+++
T Consensus 325 ~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 325 VSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 1110 1478999988776666666666666553
No 298
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=1.3e-18 Score=162.67 Aligned_cols=289 Identities=13% Similarity=0.129 Sum_probs=183.6
Q ss_pred CcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 15 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 15 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
++...++..++|+++++++.|.+.+++++||+.|+..++. + .++| |+|++.++.|.+...........
T Consensus 41 Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-l-----l~~G-----d~Vl~~~~~y~~~~~~~~~~~~~- 108 (378)
T TIGR01329 41 YTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITR-L-----LNNG-----DEIIAGDDLYGGTDRLLTQVVPR- 108 (378)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-H-----hCCC-----CEEEEcCCCchHHHHHHHHHHHH-
Confidence 3445577789999999999998999999999998887665 3 4567 99999999886543221111100
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
....+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|++||+++|+|++|...
T Consensus 109 --------~G~~v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~ 173 (378)
T TIGR01329 109 --------SGVVVVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSP 173 (378)
T ss_pred --------cCcEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc
Confidence 113344555568999999887 58999999999999999998 999999999999999999998521
Q ss_pred cccccCcccccCCCCCcEE--EecccccC--CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 249 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~ 249 (374)
....++ ....|++ |.+|.++| +. ..|+++.+ +.+.+.++..........+++.+..+...++.+ ..
T Consensus 174 -~~~~~l-----~~g~Di~v~S~tK~l~G~~~~-~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl--~~ 244 (378)
T TIGR01329 174 -LLCNPL-----ELGADIVYHSATKFLAGHSDV-MAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTL--AI 244 (378)
T ss_pred -ccCChh-----hcCCcEEEEecceeccCCccc-eeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCH--HH
Confidence 111111 2234655 66799886 34 57887764 455565554322222334555443333333322 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC
Q 017259 250 LAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 316 (374)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 316 (374)
..++...+...+.+.|++... .+|+... ...+.+.++.|.+.+. ....+|++.|...++.++-+
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~---~~~~~~~~~L~~~~i~~s~G 321 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSV---ALSKRLVEATKLFSITVSFG 321 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCH---HHHHHHHHhCcCcccccCCC
Confidence 355555666666666653211 1111110 1124567888888322 13678888886555555321
Q ss_pred ---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 ---------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ---------------------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.++.+|++.+ -|+.+.+++-|.++++
T Consensus 322 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 322 SVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFV 374 (378)
T ss_pred CCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence 1468999844 3466777777777776
No 299
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=9.8e-19 Score=162.57 Aligned_cols=295 Identities=9% Similarity=0.001 Sum_probs=182.2
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.+|..+.|++.++...+.+..++++||++|+..++..+ .++| |+|++.++.|.+..........
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~al-----l~~G-----D~Vlv~~~~Y~~~~~l~~~~l~ 125 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGF-----LSPG-----DHALIVDSVYYPTRHFCDTMLK 125 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHh-----cCCC-----CEEEEccCCcHHHHHHHHHHHH
Confidence 44556779999999999999887777788888999999999887 5677 9999999999775433211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.++.+.++++++ +++++|+++++.|+++.+.+ +++|+++|+++|+++|+|++|+
T Consensus 126 ~---------~Gi~v~~vd~~~~e~l~~al~---~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a 189 (395)
T PRK05967 126 R---------LGVEVEYYDPEIGAGIAKLMR---PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWA 189 (395)
T ss_pred h---------cCeEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCcc
Confidence 1 112334444445677888887 57999999999998887776 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC--CccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
... ......+..|++ |.+|.++| .. -+|+++.++++.+.+........-..+++.+......++-+.-
T Consensus 190 ~p~------~~~pl~~GaDivv~S~tKy~~Gh~d~-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~l- 261 (395)
T PRK05967 190 TPL------YFRPLDFGVDISIHAATKYPSGHSDI-LLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMGI- 261 (395)
T ss_pred Cce------ecChhHcCCCEEEEecccccCCCCCe-eEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHHH-
Confidence 321 112222345554 78899886 34 5666666766555543221112224466665555555543322
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCC--CchhHHHHHHHHHHCCeEe
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGILA 313 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~--~~~~~~~~~~~l~~~Gi~v 313 (374)
..++..++...+.+.|++-.. .+|+... ...+.|.++.|+++... ......+|.+.|.--.+.+
T Consensus 262 -R~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~ 340 (395)
T PRK05967 262 -RLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGY 340 (395)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEcc
Confidence 245555566666666654311 1221111 12245788889886320 0113444555443211111
Q ss_pred cc---------------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 KP---------------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ~~---------------------~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+- ..++.+||+.++ |+.+.+++-|.++++
T Consensus 341 slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~ 390 (395)
T PRK05967 341 SWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFA 390 (395)
T ss_pred CCCCcceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 10 013579999554 355566666666665
No 300
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=2.4e-18 Score=161.66 Aligned_cols=289 Identities=11% Similarity=0.115 Sum_probs=185.3
Q ss_pred CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 17 AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
+..+|....|++.++++.|.+.++.++||++|+.+++..+ .++| |+||+..+.|.+...........
T Consensus 57 R~~nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~al-----l~~G-----D~VI~~~~~Y~~T~~~~~~~l~~--- 123 (432)
T PRK06702 57 RIGNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNI-----CSSG-----DHLLCSSTVYGGTFNLFGVSLRK--- 123 (432)
T ss_pred CCCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh-----cCCC-----CEEEECCCchHHHHHHHHHHHHH---
Confidence 3447889999999999999999999999999999999877 5677 99999999996554332111000
Q ss_pred cccCCCCCCCceeccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 97 IRGFGPLLPGHLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
...++.+++.+ |+++++++|+ ++|++|+++++.|+++.+.+ +++|+++|++||+++|+|++++
T Consensus 124 ------~Gi~v~~vd~~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~--- 187 (432)
T PRK06702 124 ------LGIDVTFFNPNLTADEIVALAN---DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA--- 187 (432)
T ss_pred ------CCCEEEEECCCCCHHHHHHhCC---cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC---
Confidence 11234444543 8899999997 68999999999999999998 9999999999999999999985
Q ss_pred ccccCcccccCCCCCcEE--EecccccC-Cccchhhhee-CH----------HHHh---------------------hcC
Q 017259 176 RSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DK----------EVML---------------------CIQ 220 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~-~~----------~~~~---------------------~~~ 220 (374)
.++....+....|++ |+||.++| +. -+|.++. .. .+.. ..+
T Consensus 188 ---tP~~~~pl~~GADIvv~S~TKy~~Ghsd-~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
T PRK06702 188 ---TPYLCQAFEHGANIIVHSTTKYIDGHAS-SLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKAR 263 (432)
T ss_pred ---chhhCChhhcCCCEEEEccccccCCCcc-eeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHH
Confidence 122333333445654 88897775 22 2333221 11 1110 000
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCceee---------E-EEEeee
Q 017259 221 -PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKE---------V-RGRGLF 285 (374)
Q Consensus 221 -~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~---------~-~~~g~~ 285 (374)
..........+++.+..++..|+-+. -..++.+++..++.+.|+.... .+|+.... . .+.|.+
T Consensus 264 ~~~~~~~g~~~sp~~a~l~~rgL~Tl~--lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~ 341 (432)
T PRK06702 264 VQLLRDYGNCMSPFNAYISNIGLETLH--LRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGV 341 (432)
T ss_pred HHHHHHccCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceE
Confidence 00112334678888777777776543 3456666777777777775421 12211110 1 245788
Q ss_pred EEEEeccCCCchhHHHHHHHHHHCCeEe----------ccC-----------------CCCEEEEecCCCCCHHHHHHHH
Q 017259 286 NAVEFDKTALPVSAYDICLKMKERGILA----------KPT-----------------HDTIVRLTPPLSISSNELQEGS 338 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v----------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~ 338 (374)
+.|+++... ....+|++.|.--.+.+ .|. .++.+|++++ -|+.+.++
T Consensus 342 ~sf~l~~~~--~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi 415 (432)
T PRK06702 342 LTFGIKGGL--EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG----IEDVSDII 415 (432)
T ss_pred EEEEecCCH--HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHH
Confidence 888886321 13445555543221111 111 1468999944 35677788
Q ss_pred HHHHHHHh
Q 017259 339 KALHDVLE 346 (374)
Q Consensus 339 ~~l~~~~~ 346 (374)
+-|.++++
T Consensus 416 ~Dl~~Al~ 423 (432)
T PRK06702 416 ADLEAALV 423 (432)
T ss_pred HHHHHHHh
Confidence 88888886
No 301
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.80 E-value=2.5e-17 Score=147.40 Aligned_cols=307 Identities=19% Similarity=0.179 Sum_probs=204.1
Q ss_pred CCcHHHHHHHHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.++..+|+++|++++|.+.+ +.-++|+++-...+.+++.|+ ..+| +..|++++++ -+.||.+.+..++.+
T Consensus 108 l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YH-e~rG-~~~R~~~LIP-~SAHGTNPASAam~G------ 178 (496)
T COG1003 108 LELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYH-ESRG-EGHRNICLIP-DSAHGTNPASAAMAG------ 178 (496)
T ss_pred HHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHH-HHcC-CCcCcEEEee-ccccCCChhhHhhcC------
Confidence 45577899999999999987 777789999999999999998 6666 3344555554 555999998888876
Q ss_pred cCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-
Q 017259 99 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS- 172 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~- 172 (374)
.+++.++++ |+++|++++. ++++++++..++. -|.. ++.+.+|+++.|++|-.|+.|.+--
T Consensus 179 ------~~VV~V~~~~~G~VDlddLk~k~~---~~~AalMiTnPsT-~GvF---E~~I~ei~~ivH~~Gg~vY~DGANlN 245 (496)
T COG1003 179 ------FKVVVVKCDENGNVDLDDLRAKAE---DNLAALMITNPST-LGVF---EEDIREICEIVHEAGGQVYYDGANLN 245 (496)
T ss_pred ------ceEEEEecCCCCCccHHHHHHHhc---cceeEEEeccCcc-cccc---hhhHHHHHHHHHHcCCEEEecCcchh
Confidence 445666654 8999999988 6899988866543 3432 4559999999999999999997643
Q ss_pred ---CCcccccCcccccCCCCCcEE------EecccccCCccchhh-heeCHHHHhhcCC----C---------------C
Q 017259 173 ---GLARSGRMLASDWEEVRPDMV------ILGKALGGGVIPVSA-VLADKEVMLCIQP----G---------------E 223 (374)
Q Consensus 173 ---~~~~~g~~~~~~~~~~~~d~~------s~sK~~~~G~~~~G~-~~~~~~~~~~~~~----~---------------~ 223 (374)
|..+.|. +..|++ |||-..|||- |... +...+++...+-. . .
T Consensus 246 A~vG~~rPGd--------~G~DV~HlNLHKTF~iPHGGGG-PG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g 316 (496)
T COG1003 246 AIVGLARPGD--------MGFDVVHLNLHKTFCIPHGGGG-PGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIG 316 (496)
T ss_pred hhhccccccc--------cccceEEeecccccccCCCCCC-CCCCceehHhhccccCCCCcccCCCccccccCCCCccce
Confidence 4444443 223444 6666666544 4433 4444444332211 0 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHHHHHHHHhCCCceeeEE-EEeeeEEEEeccC--CCch
Q 017259 224 HGSTFGGNPLASAVAIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKT--ALPV 297 (374)
Q Consensus 224 ~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~ 297 (374)
....+.+|.....-+++-++.+..+++.+..+ -+.+++..+|+.... ++.... ..-+=+.++.... ..+.
T Consensus 317 ~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~----~~y~~~~~~~HE~ild~r~l~~~~Gv 392 (496)
T COG1003 317 VSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYP----VPYTGENRVAHECILDARPLKKETGV 392 (496)
T ss_pred eeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCc----cccCCCCcceeEEEeechHhHhhcCC
Confidence 11223445556667788888887765543333 367888887776321 222111 1222233333211 1245
Q ss_pred hHHHHHHHHHHCCeEeccC-----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCCCCCCCCCC
Q 017259 298 SAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA 362 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~-----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 362 (374)
+..+++++|++.|+..-.. -.+.++|-|..+.+++++|+++++|.++.+ +...++.-+..|+|.
T Consensus 393 ~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~-Ea~~~~~~~~~~~P~ 461 (496)
T COG1003 393 RALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIRE-EADAVPAGPLKDNPL 461 (496)
T ss_pred cHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHH-HHHhccCCccccCcc
Confidence 7899999999999987543 268999999999999999999999999998 777775333444443
No 302
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=1.8e-18 Score=163.59 Aligned_cols=166 Identities=20% Similarity=0.194 Sum_probs=124.6
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.++....|++.|+++.|.+..++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 56 ~~y~r~~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~l-----l~~G-----D~Vlv~~~~y~~t~~~~~~~~~ 125 (431)
T PRK08248 56 NIYTRIMNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNI-----ASAG-----DEIVSSSSLYGGTYNLFAHTLP 125 (431)
T ss_pred ceeECCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHH-----hCCC-----CEEEEccCchhhHHHHHHHHHH
Confidence 33455678889999999999999999999999999999999877 4567 9999999998664433221111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|+++|+++|+|++++
T Consensus 126 ~---------~Gv~v~~vd~~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a 189 (431)
T PRK08248 126 K---------LGITVKFVDPSDPENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFA 189 (431)
T ss_pred h---------CCEEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCC
Confidence 0 112344555568999999887 57899999999999999998 9999999999999999999986
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-Cccchhhhee
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA 211 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~ 211 (374)
.. . .........|++ |++|.++| |. ++|+++.
T Consensus 190 ~~-~-----~~~pl~~gaDivv~S~tK~lgg~g~-~~Gg~v~ 224 (431)
T PRK08248 190 SP-Y-----LLRPIEHGADIVVHSATKFIGGHGT-SIGGVIV 224 (431)
T ss_pred cc-c-----cCChhHcCCCEEEEcCccccCCCCC-ceEEEEE
Confidence 21 1 111112345655 66799996 66 7777554
No 303
>PRK05939 hypothetical protein; Provisional
Probab=99.79 E-value=2.3e-18 Score=161.51 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=124.7
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.+|...+|+++|+++.|.+..+.++||++|+..++..+ .++| |+|++.++.|.+.......+..
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~al-----l~~G-----d~Vv~~~~~y~~t~~~~~~l~~ 108 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTL-----LRAG-----DHLVSSQFLFGNTNSLFGTLRG 108 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHH-----cCCC-----CEEEECCCccccHHHHHHHHHh
Confidence 44555678899999999999999988899999999999999877 5677 9999999887554322111110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
....+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 109 ----------~G~~v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a 171 (397)
T PRK05939 109 ----------LGVEVTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMT 171 (397)
T ss_pred ----------cCCEEEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcc
Confidence 112344555568999999886 57999999999999998887 9999999999999999999986
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD 212 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~ 212 (374)
... .+.......|++ |++|.++| |. .+|+++..
T Consensus 172 ~~~------~~~~~~~gaDivv~S~sK~~~g~g~-~igg~v~~ 207 (397)
T PRK05939 172 SPW------LFRPKDVGASLVINSLSKYIAGHGN-ALGGAVTD 207 (397)
T ss_pred ccc------ccCccccCCEEEEecCeecccCCCC-eEEEEEec
Confidence 211 112222234544 88899997 77 78886653
No 304
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.79 E-value=5.1e-17 Score=156.47 Aligned_cols=309 Identities=18% Similarity=0.162 Sum_probs=186.6
Q ss_pred CcHHHHHHHHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 21 DKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
+...++.+++++++|.+.+ ++.++|+.+...++.+++.+. ..+| +.++++|++..+.|+.+...+. ..+.
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~-~~~G-d~~~~~Vlv~~~~hp~~~~~~~-~~G~------ 183 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYH-EARG-DTKRTEVIVPDSAHGTNPASAA-MAGF------ 183 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHh-hccC-cCCCCEEEEcCCccHhHHHHHH-HcCC------
Confidence 4466788888888888765 444566666655444443221 3444 1123689999998765544322 2221
Q ss_pred CCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 100 FGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 100 ~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.+..++. .|+++|++++. +++++++++.++ ++|.+. ..+++|.++|+++|.++++|.++. .
T Consensus 184 ------~vv~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn-~tG~~~---~dl~eI~~~a~~~gal~iVD~a~~-~ 249 (481)
T PRK04366 184 ------KVVEIPSNEDGLVDLEALKAAVG---EDTAALMLTNPN-TLGLFE---RNILEIAEIVHEAGGLLYYDGANL-N 249 (481)
T ss_pred ------EEEEeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCC-Cccccc---hHHHHHHHHHHHcCCEEEEEecCh-h
Confidence 1111211 27889988886 568888887654 677551 239999999999999999999985 1
Q ss_pred cccccCcccccCCCCCcEEEec--cccc-----CCccchhhheeCHHHHhhcCCCC-------------------CCCCC
Q 017259 175 ARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-------------------HGSTF 228 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~G~~~~~~~~~~~~~~~~-------------------~~~~~ 228 (374)
+..|.. ....+..|+++++ |+++ ||. .+|++..++++.+.+.... ..-.+
T Consensus 250 ~~~g~~---~~~~~GaD~~~~~~hK~l~~P~g~Ggp-~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~ 325 (481)
T PRK04366 250 AILGKA---RPGDMGFDVVHLNLHKTFSTPHGGGGP-GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF 325 (481)
T ss_pred hhcccC---CccccCCCEEEEechhhcCCCCCCCCC-CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccc
Confidence 111211 1122346777554 8877 233 4567777777766653110 00011
Q ss_pred CCCHHHHHHHHHHHHHHhhhcH---HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-CCCchhHHHHHH
Q 017259 229 GGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICL 304 (374)
Q Consensus 229 ~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~ 304 (374)
+++...+.++...+..+..+++ .++...+.++++++|+++ .. +... .....-+.+..+. ...+.+..++.+
T Consensus 326 t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~---~~~~-~~~~~~~~~~~~~~~~~g~~~~~v~~ 400 (481)
T PRK04366 326 YGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YD---LPYD-RPCMHEFVLSGKKLKETGVRTLDIAK 400 (481)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-Cc---ccCC-CCeeEEEEEECccccccCCCHHHHHH
Confidence 2344555566666666665544 355566788888888876 22 2211 1111112222211 000125788999
Q ss_pred HHHHCCeEeccC-----CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCCCCCCCCCCC
Q 017259 305 KMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPAT 363 (374)
Q Consensus 305 ~l~~~Gi~v~~~-----~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
.|.++||.+... ..+.+|++++..+|++|+|++++.|+++.+ +....+.. .+.+|+.
T Consensus 401 ~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~-~~~~~~~~-~~~~p~~ 462 (481)
T PRK04366 401 RLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAE-EAKENPEL-VKEAPHN 462 (481)
T ss_pred HHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHH-HHHhCcHh-HhhCCCC
Confidence 999999987621 256899999999999999999999999988 66554432 3344443
No 305
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=3.6e-18 Score=159.53 Aligned_cols=292 Identities=14% Similarity=0.085 Sum_probs=175.2
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.+|...+|+++++++.|.+..++++||+.|+.+++. + .++| |+|++.++.|++..........
T Consensus 42 ~~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~-~-----l~pG-----d~Vi~~~~~y~~t~~~~~~~~~ 110 (380)
T PRK06176 42 YEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVFS-L-----FQSG-----DHVLLGDDVYGGTFRLFDKVLV 110 (380)
T ss_pred CcccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHH-H-----cCCC-----CEEEEcCCChhHHHHHHHHHHH
Confidence 445567788899999999999998889999999999986553 3 4567 9999999998665432222111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|++||+++|+|++|+
T Consensus 111 ~---------~gi~v~~vd~~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 111 K---------NGLSCTIIDTSDLSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred h---------cCeEEEEcCCCCHHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcc
Confidence 0 112234444458999998886 57999999999999999988 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.. ..+.+ .+...|++ |++|.++| |-.-.|+++.+ +++.+.++..........++.........++-+.
T Consensus 175 ~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~tl~-- 246 (380)
T PRK06176 175 TP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLG-- 246 (380)
T ss_pred cc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCcHH--
Confidence 42 11222 12345665 56699985 32134556664 4555555432111111223333333332332111
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE---
Q 017259 249 KLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL--- 312 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~--- 312 (374)
-..++.+++..++.+.|+.... .+|.... ...+.|.++.|+++.. ....+|++.|.--.+.
T Consensus 247 ~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~---~~~~~f~~~l~~~~~~~s~ 323 (380)
T PRK06176 247 LRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND---SEAVAFVESLKLFILGESL 323 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH---HHHHHHHHcCCcceEccCC
Confidence 1234444555555555554310 0111110 1234578888888632 1344455544321111
Q ss_pred -------eccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 313 -------AKPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 313 -------v~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.|. ..+.+|+++++ |+.+.+++-|+++++
T Consensus 324 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~ 377 (380)
T PRK06176 324 GGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFA 377 (380)
T ss_pred CCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 1111 14789999443 456667777777776
No 306
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=5.1e-18 Score=160.51 Aligned_cols=163 Identities=16% Similarity=0.147 Sum_probs=120.8
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++.+.+|...+++++++++.|.+.+++++||++|+..++..+ .++| |+||+....|++..........
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~l-----l~~G-----d~Vi~~~~~y~~t~~~~~~~l~ 125 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATL-----MGAG-----SHIVASSALYGGSHNLLHYTLR 125 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHH-----hCCC-----CEEEEeCCccHHHHHHHHHHHh
Confidence 44455678889999999999999888999999999999999877 4567 9999999998654332211100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+.+++.+|+++++++|+ ++|++|+++++.|++|.+.+ +++|.++|++||+++|+|.+|+
T Consensus 126 ~---------~Gi~v~~vd~~d~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a 189 (433)
T PRK08134 126 R---------FGIETTFVKPGDIDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFT 189 (433)
T ss_pred h---------CCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCc
Confidence 0 112344555568999999987 68999999999999999998 9999999999999999999997
Q ss_pred -CCcccccCcccccCCCCCcEEEe--cccccC-Cccchhhh
Q 017259 173 -GLARSGRMLASDWEEVRPDMVIL--GKALGG-GVIPVSAV 209 (374)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~-G~~~~G~~ 209 (374)
++. . .......|++++ .|.++| |- .+|++
T Consensus 190 ~~~~--~-----~pl~~GaD~vv~S~tK~l~g~g~-~~gG~ 222 (433)
T PRK08134 190 TPYL--L-----RPFEHGADLVYHSATKFLGGHGT-AIGGV 222 (433)
T ss_pred cccc--C-----CchhcCCCEEEeccccccCCCCC-ceEEE
Confidence 221 1 112345676644 498875 43 34443
No 307
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=2.9e-17 Score=157.34 Aligned_cols=286 Identities=15% Similarity=0.096 Sum_probs=173.4
Q ss_pred HHHhcccCCC--eEEec---CChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc-ccccCC-ccccccC
Q 017259 28 ERLTSMFGYD--MVLPM---NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCD-NEAIRGF 100 (374)
Q Consensus 28 ~~l~~~~~~~--~~~~~---~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~-~~~~~~-~~~~~~~ 100 (374)
++++++++.+ ++.++ +||++|+..++..+ .++| |+|++.+.. ||..... ..+... ....
T Consensus 87 ~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-----~~~g-----d~Ii~~~~e-hg~~l~~~~~l~~~~~~~~--- 152 (452)
T PTZ00094 87 KRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-----LQPH-----DRIMGLDLP-SGGHLTHGFYTAKKKVSAT--- 152 (452)
T ss_pred HHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-----cCCC-----CEEEecccc-cCCcccccccccccccccc---
Confidence 4677777654 44455 79999999999888 4567 999987666 4433222 111000 0000
Q ss_pred CCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 101 GPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 101 ~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
....++..+++ .|++++++.++++ +++.+++. .+.+|...| +++|.++|+++|+++++|++|+ +|
T Consensus 153 -~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G 222 (452)
T PTZ00094 153 -SIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SG 222 (452)
T ss_pred -eeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hc
Confidence 00001111111 2899999999754 34445542 345788888 9999999999999999999998 22
Q ss_pred ccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCC----CC-CCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 176 RSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQP----GE-HGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
..+........ ...|++++| |++.|.. + |+++.++++.+.+.. .. .....+++....++..++++.+...
T Consensus 223 ~i~~~~~~~~~-~~~D~l~~S~hK~l~GP~-G-g~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~ 299 (452)
T PTZ00094 223 LVAAGVLPSPF-PYADVVTTTTHKSLRGPR-S-GLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSP 299 (452)
T ss_pred cccCCCCCCCC-CCCcEEEcCCccCCCCCC-c-eEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhCh
Confidence 22211000111 146777665 9997665 3 666666554332211 10 1111244667777788888887442
Q ss_pred ---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc----C-----
Q 017259 249 ---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T----- 316 (374)
Q Consensus 249 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~----~----- 316 (374)
++.+++.++.+++.+.|++.+.. +.... .......+.+... +.+..++...|.++||.+.. +
T Consensus 300 ~~~~~~~~i~~l~~~l~~~L~~~g~~---v~~~~-~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~ 373 (452)
T PTZ00094 300 EWKEYAKQVLKNAKALAAALEKRGYD---LVTGG-TDNHLVLVDLRPF--GITGSKMEKLLDAVNISVNKNTIPGDKSAL 373 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcE---EecCC-CCCceEeecCCcC--CCCHHHHHHHHHHCCcEEecccCCCCCcCC
Confidence 46788888888888888664211 21110 0112233333221 11567888888888999952 1
Q ss_pred CCCEEEEecCCCCC----HHHHHHHHHHHHHHHh
Q 017259 317 HDTIVRLTPPLSIS----SNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ~~~~lRi~~~~~~~----~e~i~~~~~~l~~~~~ 346 (374)
.++++|++++..++ ++|++++++.|.++++
T Consensus 374 ~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 374 NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 24789999976665 9999999999999987
No 308
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=4.4e-18 Score=150.04 Aligned_cols=296 Identities=17% Similarity=0.178 Sum_probs=206.4
Q ss_pred cCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 16 RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 16 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
+++.-+.+.+++++|++++|.+..++.+.|-+++..++.++ .++| |.+++.+..- -..+..+.++
T Consensus 134 FYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipaf-----sKrG-----DIi~~de~~n-faIq~GlqlS---- 198 (467)
T KOG1358|consen 134 FYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAF-----SKRG-----DIIFVDEAVN-FAIQKGLQLS---- 198 (467)
T ss_pred ccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhh-----hccC-----cEEEEehhhh-HHHHHHHhhh----
Confidence 45778889999999999999999999999999999999988 7888 9998877653 2222222222
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcC------Cc----EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEE
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESG------DQ----IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM 165 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~------~~----~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~l 165 (374)
...+..+.++|++++|+.+.+.. ++ .+.++++..+.|+|.+++ +.+|.++..||...+
T Consensus 199 --------RS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~Rv 266 (467)
T KOG1358|consen 199 --------RSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRV 266 (467)
T ss_pred --------hheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEE
Confidence 24466777789999987766421 11 577888899999999999 999999999999999
Q ss_pred EEecccc-C-CcccccCcccccCCCC---CcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCCCCC--CHHHHH
Q 017259 166 IADEIQS-G-LARSGRMLASDWEEVR---PDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG--NPLASA 236 (374)
Q Consensus 166 i~Dea~~-~-~~~~g~~~~~~~~~~~---~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 236 (374)
|.||.++ | ++++|.. ..+++++. .|+++.| -++++ ..|+++++..+.+.-+-...++.|+. ++....
T Consensus 267 ildEs~SfG~lg~~GrG-vteH~~v~~~~iDiv~~sm~~alas---~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~ 342 (467)
T KOG1358|consen 267 ILDESLSFGVLGKTGRG-VTEHFGVPITDIDIVTASMETALAS---GGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAG 342 (467)
T ss_pred EEecccccccccccCcc-ccccCCCCccceeeeeecccccccc---cCceeecceeeEeeeeccccceeeeccCchhhhh
Confidence 9999998 3 4666665 44666654 3455544 34441 22346665555444444445666644 666666
Q ss_pred HHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-----chhHHHHHHHHHHCC
Q 017259 237 VAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERG 310 (374)
Q Consensus 237 aa~~al~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~l~~~G 310 (374)
|+..++..+..+ ++.+.++.....+...++... .+.......+.++.+.+..... ...-+++++.++.+|
T Consensus 343 aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s----~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~ 418 (467)
T KOG1358|consen 343 AAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNS----GFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEG 418 (467)
T ss_pred hHHHHHHHHhhCcchhhhhhccccccchhhhcCC----ceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhc
Confidence 777777776554 566777777777777666532 1222233345666666644211 122456888888778
Q ss_pred eEeccC----------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 311 ILAKPT----------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 311 i~v~~~----------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+... -+..+||++...+++||++++++.|++...
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 887542 256899999999999999999999988765
No 309
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=6.9e-18 Score=159.97 Aligned_cols=290 Identities=11% Similarity=0.107 Sum_probs=179.5
Q ss_pred CcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 15 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 15 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
++.+.++.+++++++++++.+.+.++.++||++|+..++ .+ .++| |+|++..+.|.+............
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~l-----l~~G-----D~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HL-----IKNG-----EEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HH-----hCCC-----CEEEEcCCchhhHHHHHHHHHHHC
Confidence 344456789999999999999999999999998875544 33 4677 999999999866532221110000
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
+ ..+..++..|+++++++++ +++++++++++.|++|.+.+ +++|.++|++||+++|+|++|+..
T Consensus 196 G---------~~v~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 196 G---------VVVKRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred C---------eEEEEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccc
Confidence 0 1233344457889988886 57899999999999998877 999999999999999999998622
Q ss_pred cccccCcccccCCCCCcEE--EecccccC-CccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcH
Q 017259 175 ARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 250 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~ 250 (374)
..+.+ .+...|++ |++|.++| |-+-.|.+..+ +.+.+.++..........+++.+..++..++.+. ..
T Consensus 260 -~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~--~R 331 (464)
T PLN02509 260 -VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMA--LR 331 (464)
T ss_pred -ccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHH--HH
Confidence 11221 12345665 66799886 32024555554 3343333211111122346777777777777653 34
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe----
Q 017259 251 AERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA---- 313 (374)
Q Consensus 251 ~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v---- 313 (374)
.++.+++..++.+.|+.... .+|+... ...+.|.++.|.+.+. ..+..|++.|.--.+.+
T Consensus 332 ~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~---~~~~~f~~~l~l~~~a~slG~ 408 (464)
T PLN02509 332 IEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV---ALSKHLVETTKYFSIAVSFGS 408 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCH---HHHHHHHHcCCcceEcccCCC
Confidence 66777777777777764321 1221111 1124577888877321 13444555443211111
Q ss_pred ------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.||+++++ |+.+.+++-|+++++
T Consensus 409 ~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 409 VKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred CCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 111 14789999443 466777777877776
No 310
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=9.9e-17 Score=150.71 Aligned_cols=304 Identities=15% Similarity=0.152 Sum_probs=181.4
Q ss_pred HHHHHHh-cccCCCeE-EecCChHHHHHHHHHHHHHccccc-----ccC----------------CCCccEEEEeccCCC
Q 017259 25 VFAERLT-SMFGYDMV-LPMNTGAEGVETALKLARKWGYVK-----KKF----------------SIDEAIIVSCCGCFH 81 (374)
Q Consensus 25 ~l~~~l~-~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~-----~G~----------------~~~~~~vi~~~~~yh 81 (374)
.++.+.+ +.++.+++ +-..||+.|+.+++.++..+...+ +|. .-+.|+|+..+...-
T Consensus 98 ~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~G 177 (493)
T PRK13580 98 WEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSG 177 (493)
T ss_pred HHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCC
Confidence 3443333 35688865 778899999999999996431001 110 000289999877653
Q ss_pred CcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 017259 82 GRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 161 (374)
Q Consensus 82 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~ 161 (374)
|+..-.... +.........++..+...- .-|.+++++.+++ .++.+++....+. +...| +++|.++|+++
T Consensus 178 GHlthg~~~-n~~~~~~~~~~y~vd~~~g-~iD~d~l~~~~~~---~~plvii~g~S~~-~~~~d----l~~i~eia~~~ 247 (493)
T PRK13580 178 GHLTHGFRP-NISGKMFHQRSYGVDPDTG-LLDYDEIAALARE---FKPLILVAGYSAY-PRRVN----FAKLREIADEV 247 (493)
T ss_pred CeeecCccc-chhhheeeeEecccCcccC-ccCHHHHHHHHhh---cCCEEEEeCcccc-CCCcC----HHHHHHHHHHc
Confidence 332221110 0000000000111110000 0278999998884 4556666666555 44667 99999999999
Q ss_pred CCEEEEecccc-CCcccccCcccccC-CCCCcEE--EecccccCCccchhhheeCHHHHhhcCCCCCCCCC-CCCHHHHH
Q 017259 162 NILMIADEIQS-GLARSGRMLASDWE-EVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF-GGNPLASA 236 (374)
Q Consensus 162 ~i~li~Dea~~-~~~~~g~~~~~~~~-~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 236 (374)
|.++++|++|+ |+.. +........ ....|++ |++|++.|. ++|++++++++.+.+... ....+ ++.+...+
T Consensus 248 gA~L~VD~AH~~Glig-g~~~~~~~~~~~~~D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iA 323 (493)
T PRK13580 248 GAVLMVDMAHFAGLVA-GKVFTGDEDPVPHADIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMA 323 (493)
T ss_pred CCEEEEECchhhceec-cccchhhcCCCCCCcEEEeCChhhccCC--CeEEEEecHHHHHHHhhC-CCcccCCCccHHHH
Confidence 99999999998 4311 122110000 1245665 667999654 346788898888877422 12222 22223444
Q ss_pred HHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 237 VAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 237 aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
++..++..+... ++.+++.++.+++++.|++.+.. ++.. ....+++.+.+.+.. .....+.+.|.+.||++
T Consensus 324 A~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~---vv~g-gTdshIV~V~lg~~~--~~g~~a~~~L~e~GI~v 397 (493)
T PRK13580 324 AKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGAR---LVTG-GTDNHLVLIDVTSFG--LTGRQAESALLDAGIVT 397 (493)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCC---ccCC-CCCCCEEEEEeCCHH--HHHHHHHHHHHHCCeEE
Confidence 444455555432 47888889999999998877532 2211 124577777775432 12346777899999999
Q ss_pred ccC-------C---CCEEEEecCC----CCCHHHHHHHHHHHHHHHhccC
Q 017259 314 KPT-------H---DTIVRLTPPL----SISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 314 ~~~-------~---~~~lRi~~~~----~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
... + ...|||+++. .++++|++++++.|.++++ ..
T Consensus 398 n~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~-~~ 446 (493)
T PRK13580 398 NRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS-NT 446 (493)
T ss_pred ccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH-hh
Confidence 632 2 5679999876 5579999999999999987 54
No 311
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.3e-18 Score=158.35 Aligned_cols=218 Identities=13% Similarity=0.106 Sum_probs=144.4
Q ss_pred cCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 14 SSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++.+.++...+|++.|+++.|.+..++++||+.++..++. + .++| |+|++.++.|.+...........
T Consensus 43 ~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~~-~-----l~~G-----d~Viv~~~~y~~~~~~~~~~~~~ 111 (377)
T PRK07671 43 EYSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVMM-L-----FSSG-----DHVILTDDVYGGTYRVMTKVLNR 111 (377)
T ss_pred CcCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHH-H-----hCCC-----CEEEECCCccchHHHHHHHHHhc
Confidence 34457788899999999999988888889999988876553 3 4567 99999999986543322211100
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
....+..++..|+++++++++ ++++++++++++|++|.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 112 ---------~G~~v~~v~~~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~ 175 (377)
T PRK07671 112 ---------FGIEHTFVDTSNLEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMT 175 (377)
T ss_pred ---------CCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCc
Confidence 012233444458999999887 57899999999999998887 99999999999999999999973
Q ss_pred CcccccCcccccCCCCCcEE--EecccccCC--ccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 174 LARSGRMLASDWEEVRPDMV--ILGKALGGG--VIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G--~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
. ..+.+. ....|++ |++|.++|. . -.|+++. ++++.+.+...........+++.+..++..++.+..
T Consensus 176 ~-~~~~p~-----~~g~Divv~S~sK~l~G~~~~-~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl~~- 247 (377)
T PRK07671 176 P-YWQSPI-----SLGADIVLHSATKYLGGHSDV-VAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTLGI- 247 (377)
T ss_pred c-ccCChh-----hhCCeEEEecCcccccCCccc-eeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChHHH-
Confidence 2 112221 2234554 677999852 2 2344554 456766665332222233455555544444443322
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 017259 249 KLAERSAHLGEELRQHLFK 267 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~ 267 (374)
..++.+++...+.+.|++
T Consensus 248 -R~~~~~~na~~la~~L~~ 265 (377)
T PRK07671 248 -RMEEHETNSRAIAEFLNN 265 (377)
T ss_pred -HHHHHHHHHHHHHHHHHc
Confidence 355556666677776665
No 312
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.78 E-value=4.5e-17 Score=165.79 Aligned_cols=303 Identities=14% Similarity=0.151 Sum_probs=188.2
Q ss_pred CcHHHHHHHHhcccCCCeEEecC-ChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 21 DKFPVFAERLTSMFGYDMVLPMN-TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~~~~~~~-~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
+...++.++|++++|.+.+-+.. +|++|...++.+++.++ ..+| +.++++|++.+.. |+.+.......+-
T Consensus 542 ~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~-~~~G-~~~r~~vlis~~a-H~snp~sa~~~G~------ 612 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYH-ESRG-EGHRDVCLIPSSA-HGTNPASAVMAGM------ 612 (954)
T ss_pred HHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHh-hccC-CCCCCEEEEEchh-hhhhHHHHHHCCC------
Confidence 34567888999999998875555 56666667777777654 4555 2234667777666 6665554433321
Q ss_pred CCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-C
Q 017259 100 FGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G 173 (374)
Q Consensus 100 ~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~ 173 (374)
.++.++.+ |+++|+++++.++.+++++++..+...++...+ +++|+++||++|+++++|.++. +
T Consensus 613 ------~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 613 ------KVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred ------EEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh
Confidence 22222221 799999999865456888877665444333356 9999999999999999999996 2
Q ss_pred CcccccCcccccCCCCCcEEEec--cccc-----CCccchhhheeCHHHHhhcCCCCC--------CCCCCCCHH----H
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGEH--------GSTFGGNPL----A 234 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~G~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~ 234 (374)
+. +- . ....+..|+++++ |+++ ||- .+|.+..++.+...+-.... ..+...+.+ .
T Consensus 683 l~--~l--~-~pg~~GADi~~~s~HK~f~~P~G~GGP-g~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 683 QV--GL--A-RPGDIGADVSHLNLHKTFCIPHGGGGP-GVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred cc--CC--C-ChhhcCCCEEEecCcccCCCCcCCCCC-ceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence 21 10 0 1113456888777 8876 233 45667666554433322110 011111222 2
Q ss_pred HHHHHHHHHHHhhhcHHHHHH---HHHHHHHHHHHHHHHhCCCceeeEE--EEeeeEEEEecc--CCCchhHHHHHHHHH
Q 017259 235 SAVAIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDK--TALPVSAYDICLKMK 307 (374)
Q Consensus 235 ~~aa~~al~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~--~~g~~~~~~~~~--~~~~~~~~~~~~~l~ 307 (374)
+..++..+..+..+++.+..+ .+.+++.++|++... +....+ ...+=+.+++.. ...+....++.++|.
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~----~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~ 832 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYP----VLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI 832 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcC----ccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH
Confidence 233555566666666666666 788888888876421 211100 011112233321 101225789999999
Q ss_pred HCCeEeccC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 308 ERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 308 ~~Gi~v~~~---~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
+.|+..... ..+.+||++....+++|+|+++++|+.+.+ ++.+++
T Consensus 833 d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~-e~~~~~ 880 (954)
T PRK05367 833 DYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRA-EIDEVE 880 (954)
T ss_pred HCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHH-HHHHhh
Confidence 999887553 278999999999999999999999999998 776643
No 313
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.1e-17 Score=158.65 Aligned_cols=293 Identities=14% Similarity=0.174 Sum_probs=182.0
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++...++...+|+++|+++.|.+.+++++||++|+..++..+ .++| |+|++..+.|++..........
T Consensus 55 ~~y~r~~~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~al-----l~pG-----d~VIv~~~~y~~t~~~~~~~~~ 124 (427)
T PRK05994 55 NIYTRITNPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTL-----LQPG-----DEFIAARKLYGGSINQFGHAFK 124 (427)
T ss_pred cceECCCCccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHH-----hCCC-----CEEEEecCcchhHHHHHHHHHH
Confidence 33445667889999999999999999999999999999999887 4567 9999999999765332111100
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+..++.+|+++++++++ ++++++++++++|++|.+.+ +++|.++|++||+++|+|++|+
T Consensus 125 ~---------~G~~v~~vd~~d~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a 188 (427)
T PRK05994 125 S---------FGWQVRWADADDPASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLA 188 (427)
T ss_pred h---------cCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCcc
Confidence 0 112344455568999999887 57999999999999999998 9999999999999999999997
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC-HH-----------------------HHhhcC-----
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KE-----------------------VMLCIQ----- 220 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~-~~-----------------------~~~~~~----- 220 (374)
.. . ........+|++ |++|.++| |- .+|+++.. .. +.+.+.
T Consensus 189 ~~-~-----~~~pl~~gaDivv~S~tK~lgg~~~-~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (427)
T PRK05994 189 SP-Y-----LIRPIEHGADIVVHSLTKFLGGHGN-SMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFA 261 (427)
T ss_pred cc-c-----cCCccccCCcEEEEcCccccCCCCC-cEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhH
Confidence 21 1 112223456765 66799885 43 45543331 11 000000
Q ss_pred --C---CCCCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHH----hCCCceee----------EEE
Q 017259 221 --P---GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKE----------VRG 281 (374)
Q Consensus 221 --~---~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~----------~~~ 281 (374)
. .........+++.+..++..++.+. ...++.+++..++.+.|+.... .+|+.... ..+
T Consensus 262 ~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~--~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g 339 (427)
T PRK05994 262 IAARVLGLRDLGPAISPFNAFLILTGIETLP--LRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKG 339 (427)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCC
Confidence 0 0001112345666665655555442 3456667777777777765321 12211110 134
Q ss_pred EeeeEEEEeccCCCchhHHHHHHHHHHCCeEe----------ccC-----------------CCCEEEEecCCCCCHHHH
Q 017259 282 RGLFNAVEFDKTALPVSAYDICLKMKERGILA----------KPT-----------------HDTIVRLTPPLSISSNEL 334 (374)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v----------~~~-----------------~~~~lRi~~~~~~~~e~i 334 (374)
.|.++.|++..+. ....+|++.|.--.+.+ .|. ..+.+|+++++ |+.
T Consensus 340 ~g~~~sf~l~~~~--~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~ 413 (427)
T PRK05994 340 AGAVFTFGLKGGY--EAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDV 413 (427)
T ss_pred ceEEEEEEecCCH--HHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCH
Confidence 5888888886321 12344554443222111 111 14689999553 455
Q ss_pred HHHHHHHHHHHh
Q 017259 335 QEGSKALHDVLE 346 (374)
Q Consensus 335 ~~~~~~l~~~~~ 346 (374)
+.+++-|.++++
T Consensus 414 ~dli~dl~~Al~ 425 (427)
T PRK05994 414 DDIIADLEQALA 425 (427)
T ss_pred HHHHHHHHHHHh
Confidence 666777777665
No 314
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.6e-17 Score=154.29 Aligned_cols=295 Identities=11% Similarity=0.013 Sum_probs=188.9
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++..+|-...|+++|+++.|.+.+++++||+.|+..++..+ .++| |+|++....|.+..........
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~l-----l~~G-----D~Vv~~~~~Yg~t~~l~~~~l~ 123 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAF-----VEQG-----DHVLMTGTAYEPTQDFCSKILS 123 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHH-----cCCC-----CEEEEeCCCcHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999877 5667 9999998887665443321111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC--CEEEEecc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEI 170 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~--i~li~Dea 170 (374)
.+...+.+++..|.++++++|+ +++++|+++++.|+++.+.+ +++|+++||+++ +++++|.+
T Consensus 124 ---------~~Gi~v~~vd~~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT 187 (395)
T PRK08114 124 ---------KLGVTTTWFDPLIGADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNT 187 (395)
T ss_pred ---------hcCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECC
Confidence 1113455555568899999987 57999999999999999999 999999999984 99999999
Q ss_pred ccCCcccccCcccccCCCCCcEE--EecccccC-C-ccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 171 QSGLARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
++. + ..+....+..|++ |.+|.++| + . .+|.++.++++.+.+........-..+++.+......++-+.
T Consensus 188 ~a~----p--~~~~pl~~GaDivv~S~tKyl~Ghsdv-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~ 260 (395)
T PRK08114 188 WAA----G--VLFKALDFGIDISIQAGTKYLVGHSDA-MIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLG 260 (395)
T ss_pred Ccc----c--cccCHHHcCCcEEEEcCcccccCCCcc-eeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHH
Confidence 972 1 1234444556776 55599886 3 4 556666676655544422111222445666555544444332
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 247 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
- ..++..++...+.+.|++-.. .+|+... ...+.|.++.|+++..........|++.|.--.+.+
T Consensus 261 l--R~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~ 338 (395)
T PRK08114 261 V--RLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAY 338 (395)
T ss_pred H--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeec
Confidence 1 245666667777776664321 1221111 123458888888864210113344555443211111
Q ss_pred ---------c---c-------------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ---------K---P-------------THDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ---------~---~-------------~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
. + ..++.+|++.++ |+.+.+++-|.++++
T Consensus 339 SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~ 392 (395)
T PRK08114 339 SWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFA 392 (395)
T ss_pred ccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 1 0 013689999553 456666777777765
No 315
>PRK02769 histidine decarboxylase; Provisional
Probab=99.77 E-value=5e-16 Score=144.54 Aligned_cols=284 Identities=14% Similarity=0.067 Sum_probs=184.9
Q ss_pred HHHHHHHHhcccCCC--e--EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 23 FPVFAERLTSMFGYD--M--VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~--~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.++..+++++++|.+ + .++|+|||+++..++...+.. .++ ++|++.+..+ .....+....+......
T Consensus 67 e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~---~~~-----~~ii~s~~~H-~Sv~ka~~~lg~~~~~V 137 (380)
T PRK02769 67 ERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL---FPD-----GTLYYSKDTH-YSVSKIARLLRIKSRVI 137 (380)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh---CCC-----cEEEeCCCce-ehHHHHHHHcCCCCcee
Confidence 335667777777653 3 489999999999998877642 234 6777777664 44433333322221111
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC---CEEEEeccccCCc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN---ILMIADEIQSGLA 175 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~---i~li~Dea~~~~~ 175 (374)
+...+.. -|+++|+++|++.+.++.+++++...+.+|.+.| +++|.++|++|| +++++|.+|+++.
T Consensus 138 ---~~~~~g~----id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~~ 206 (380)
T PRK02769 138 ---TSLPNGE----IDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGMI 206 (380)
T ss_pred ---ccCCCCc----CcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEeccccee
Confidence 1101111 1899999999865556889999999999999999 999999999998 6999999998641
Q ss_pred ccc--cCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCC-----CCCC--CCCHHHHHHHHHHHHH
Q 017259 176 RSG--RMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-----GSTF--GGNPLASAVAIASLDV 244 (374)
Q Consensus 176 ~~g--~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~aa~~al~~ 244 (374)
..- ....++... ..|.+++| |.+++.. ++|+++.+++..+.+.+... ..++ +.+..+.++.+++++.
T Consensus 207 ~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~-g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 207 LPFVNNPPPFSFAD-GIDSIAISGHKFIGSPM-PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred ecccCccccCCccC-CCCEEEECCcccCCCCC-CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence 110 000112112 56888887 8777677 88988888877666532111 1122 3355667778888888
Q ss_pred Hhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCCCCEE
Q 017259 245 IRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV 321 (374)
Q Consensus 245 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~l 321 (374)
+..+ +..++..++.+++.++|++. ++.....+..+.+.|..+ + +++. +|..+.+. .+.+
T Consensus 285 lg~~G~~~~~~~~~~la~~l~~~L~~~-----g~~~~~~p~~~~v~f~~~------~-~~~~-----~~w~l~~~-~~~~ 346 (380)
T PRK02769 285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-----GIPAWRNPNSITVVFPCP------S-ERIW-----KKWHLATS-GNQA 346 (380)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCEEEcCCCceEEEEcCC------C-HHHH-----hCeeEccc-CCEE
Confidence 7665 44566666777777777653 232223334444544322 1 2222 67777666 4589
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|+......+.+.++++++.|...+.
T Consensus 347 hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 347 HIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHh
Confidence 9998888899999999999988876
No 316
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.76 E-value=4.8e-16 Score=155.80 Aligned_cols=310 Identities=16% Similarity=0.219 Sum_probs=200.6
Q ss_pred CcHHHHHHHHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccccc
Q 017259 21 DKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRG 99 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 99 (374)
....++.++|++++|.+.+ ++.++|++|...++++++.|+ ..+| ..+|++|+++. +-||.+.......+
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~-~~rg-e~~R~~vlip~-saHgtnPasa~~~G------- 599 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYH-ESRG-ENHRNICLIPV-SAHGTNPASAAMAG------- 599 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHH-HhcC-CCCCCEEEEEc-cccCcCHHHHHHCC-------
Confidence 4566799999999999865 777778877777888888765 4444 22345555554 45887766544433
Q ss_pred CCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC-
Q 017259 100 FGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG- 173 (374)
Q Consensus 100 ~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~- 173 (374)
..+..++.+ |+++|++++++++++++++++..+++ .|.+.++ +++|+++||++|.++++|.++..
T Consensus 600 -----~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~a 670 (939)
T TIGR00461 600 -----MQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNA 670 (939)
T ss_pred -----CEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhh
Confidence 123333332 89999999987667899999988776 4555433 99999999999999999999862
Q ss_pred CcccccCcccccCCCCCcEEEec--cccc-----CCccchhhheeCHHHHhhcCCCCC----------------CCCCCC
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLCIQPGEH----------------GSTFGG 230 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~G~~~~~~~~~~~~~~~~~----------------~~~~~~ 230 (374)
... ....-.+..|++.+| |+|+ ||- .+|.+.+++++...+-.... ...+.+
T Consensus 671 l~~-----l~~Pg~~GaDi~~~s~HKtf~~P~G~GGP-g~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g 744 (939)
T TIGR00461 671 QVG-----LTSPGDLGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYG 744 (939)
T ss_pred CCC-----CCCccccCCCEEEecCCccCCCCCCCCCC-CeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccC
Confidence 211 111123567888776 8777 555 66778887765443321100 011234
Q ss_pred CHHHHHHHHHHHHHHhhhcHH---HHHHHHHHHHHHHHHHHHHhCCCceeeEE--EEeeeEEEEeccC--CCchhHHHHH
Q 017259 231 NPLASAVAIASLDVIRDEKLA---ERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKT--ALPVSAYDIC 303 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~g~~~~~~~~~~--~~~~~~~~~~ 303 (374)
+...+..++..++.+..+++. +....+.+++.++|++. + ....... ...+=+.++++.. ..+....++.
T Consensus 745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~-~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIa 820 (939)
T TIGR00461 745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---Y-PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVA 820 (939)
T ss_pred cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---C-cccccCCCCceeEEEEEeccchhhhcCCCHHHHH
Confidence 555556677777887776554 33445677888888762 1 1222110 1112233444321 1123688999
Q ss_pred HHHHHCCeEeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCC--CCCCCC
Q 017259 304 LKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK--PKPADA 360 (374)
Q Consensus 304 ~~l~~~Gi~v~~~~---~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~--~~~~~~ 360 (374)
++|++.|++..... .+.+.|.|....+++|+|++++++.++.+ ++..++. +++.++
T Consensus 821 krL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~-e~~~~~~g~~~~~~~ 881 (939)
T TIGR00461 821 KRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE-EINALVAGQPKGQDN 881 (939)
T ss_pred HHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH-HHHHhhcCCCCCCcc
Confidence 99999998764321 35888888899999999999999999988 7766433 444443
No 317
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.76 E-value=4.5e-17 Score=151.72 Aligned_cols=259 Identities=10% Similarity=0.061 Sum_probs=161.7
Q ss_pred CcHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 21 DKFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
+..++++++++++++. +++++++|++++++.++..+... +..++++.|++....++........+... +.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~-----~~~~g~~~vi~~~~~~~s~~~~~~~~~~~-G~-- 113 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARA-----GEQKGKKHIITSAIEHPAVLEPIRALERN-GF-- 113 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh-----cccCCCCeeeEcccccHHHHHHHHHHHhc-CC--
Confidence 3467789999998865 47999999999999999887532 11123366777665543322222111110 11
Q ss_pred cCCCCCCCceeccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 99 GFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.+..++. .|+++++++++ +++++++++++++++|.+.+ +++|.++|+++|+++|+|++|+
T Consensus 114 -------~v~~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~- 178 (353)
T TIGR03235 114 -------TVTYLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV- 178 (353)
T ss_pred -------EEEEEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-
Confidence 1111221 27899998886 46899999999999999998 9999999999999999999987
Q ss_pred CcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhh--cCCCCC-------CCCCCCCHHHHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLC--IQPGEH-------GSTFGGNPLASAVAIASL 242 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~aa~~al 242 (374)
++.. .++......|++++| |.++ .. ++|+++.+++.... +.+... ......+.....+..+++
T Consensus 179 ~g~~----~~~~~~~~~D~~~~s~~K~~g-p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al 252 (353)
T TIGR03235 179 VGKI----TVDLSADRIDLISCSGHKIYG-PK-GIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAA 252 (353)
T ss_pred cCCc----cccccccCCCEEEeehhhcCC-CC-ceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHH
Confidence 2211 122223456877666 9754 33 56788887764322 222111 112345666677777777
Q ss_pred HHHhh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC
Q 017259 243 DVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 316 (374)
Q Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 316 (374)
+.+.. ++..++++++.+++++.|++.+.. +... ....+.++.+.++.. +..++.+.|.+ +|.++++
T Consensus 253 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~~---~~~~~~~~~~~i~~~~~~~~----~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 253 EIARRNAQAWEVKLRAMRNQLRDALQTLGVK---LNGDPAETIPHILNFSIDGV----NSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhccCCeE---EeCCcccccCCEEEEEeCCc----CHHHHHHHHhC-CeEEEch
Confidence 77643 255677777777777777552111 1111 112244555555432 57788888864 8888765
No 318
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.76 E-value=3.4e-17 Score=151.86 Aligned_cols=289 Identities=20% Similarity=0.185 Sum_probs=175.9
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.+|-...+++.|+++.+.+.++.++||..|+..++..+ .+.| |+|++....|++..........
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~l-----l~~G-----d~iv~~~~~Y~~t~~~~~~~l~ 116 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLAL-----LKPG-----DHIVASDDLYGGTYRLLEELLP 116 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHH-----S-TT-----BEEEEESSSSHHHHHHHHHCHH
T ss_pred cceeccccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhh-----cccC-----CceEecCCccCcchhhhhhhhc
Confidence 45566779999999999999999999999999999999999888 5667 9999999999775444332221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-CEEEEeccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-ILMIADEIQ 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~-i~li~Dea~ 171 (374)
. ....+.+++..|+++++++++ +++++|++|++.|++..+.+ +++|+++|+++| +++++|+++
T Consensus 117 ~---------~gv~v~~~d~~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 117 R---------FGVEVTFVDPTDLEALEAALR---PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp H---------TTSEEEEESTTSHHHHHHHHC---TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTT
T ss_pred c---------cCcEEEEeCchhHHHHHhhcc---ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccc
Confidence 1 113455666678999999998 58999999999999998888 999999999998 999999998
Q ss_pred cCCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC--HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 172 SGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD--KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
+.. +....+....|++ |.+|-++| +=+-+|.++.+ +++.+.++..........++..+......++-+.
T Consensus 181 atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 181 ATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTLP 254 (386)
T ss_dssp THT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHH
T ss_pred cce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcHH
Confidence 622 1222233345655 77798885 32134556654 3666655432111112234444444444443221
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeE------------------EEEeeeEEEEeccCCCchhHHHHHHHHHH
Q 017259 247 DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNAVEFDKTALPVSAYDICLKMKE 308 (374)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (374)
-..++..++..++.+.|+.- | .+..+ .+.|.++.|++++.. .....|.+.|.-
T Consensus 255 --~R~~~~~~nA~~lA~~L~~h----p-~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~--~~~~~f~~~l~l 325 (386)
T PF01053_consen 255 --LRMERQNENAEALAEFLEEH----P-KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE--EAARRFLDALKL 325 (386)
T ss_dssp --HHHHHHHHHHHHHHHHHHTS----T-TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH--HHHHHHHHH-SS
T ss_pred --HHHHHHHHHHHHHHHHHHhC----C-CCCeEEEcccccccceeeeeecccccCceeEEEeccch--hhhHhHHhhhhh
Confidence 12445555565665555443 2 22221 134568888887531 123445554431
Q ss_pred C--Ce--------EeccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 309 R--GI--------LAKPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 309 ~--Gi--------~v~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
- |. +..|. .++.+|++.+ -|+.+.+++.|+++++
T Consensus 326 ~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 326 FSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG----LEDPDDLIADLEQALE 386 (386)
T ss_dssp SEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------SS-HHHHHHHHHHHHH
T ss_pred HhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----cCCHHHHHHHHHHhcC
Confidence 1 11 11111 1578999944 3566777777777764
No 319
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.76 E-value=3.5e-16 Score=134.25 Aligned_cols=291 Identities=15% Similarity=0.110 Sum_probs=200.7
Q ss_pred cHHHHHHHHhccc---CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 22 KFPVFAERLTSMF---GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 22 ~~~~l~~~l~~~~---~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.++++.+-+...+ +....++..+|+.+.+.|+..+ ..+| |++++..-+-.|....-. .. +
T Consensus 51 Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~-----lePg-----d~vLv~~~G~wg~ra~D~--~~----r- 113 (385)
T KOG2862|consen 51 IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL-----LEPG-----DNVLVVSTGTWGQRAADC--AR----R- 113 (385)
T ss_pred HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh-----cCCC-----CeEEEEEechHHHHHHHH--HH----h-
Confidence 3455555555544 3335688889999999999988 5677 888877655444322211 11 1
Q ss_pred cCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 99 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
+...+..++.+ .++.+++++.+| +++++++....++||.+.+ .++.+.++||+|+.++++|.+-+
T Consensus 114 ----~ga~V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS- 183 (385)
T KOG2862|consen 114 ----YGAEVDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS- 183 (385)
T ss_pred ----hCceeeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh-
Confidence 11223333322 689999999986 7889999999999998765 36777899999999999999987
Q ss_pred CcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCCC-----------------------CCCCCC
Q 017259 174 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGG 230 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~-----------------------~~~~~~ 230 (374)
+ .|..|.++.++++.-....-|++++.- +++.+..+++..++++..+. .+.+.+
T Consensus 184 l--ggt~F~mDewgVDvaytgSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~ 260 (385)
T KOG2862|consen 184 L--GGTEFEMDEWGVDVAYTGSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTP 260 (385)
T ss_pred c--CCccceehhhcccEEEecchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCC
Confidence 3 355677777766432334449999654 55667788888888764421 122355
Q ss_pred CHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 231 NPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
+.....+.+++|+.+-++ +..++.++..++++..|++++-.+ -.+...........+..+... +..+++.+++
T Consensus 261 pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~-fv~~e~~rlptvttv~vp~gv---Dw~dVv~~~~ 336 (385)
T KOG2862|consen 261 PVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQL-FVVDEELRLPTVTTVKVPYGV---DWKDVVAYAM 336 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-eecChhhccCcceeeecCCCC---CHHHHHHHHH
Confidence 677777888888887665 567788889999999999876442 133333444555566666555 8899999999
Q ss_pred HC-CeEecc----CCCCEEEEec-CCCCCHHHHHHHHHHHHHHHh
Q 017259 308 ER-GILAKP----THDTIVRLTP-PLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 308 ~~-Gi~v~~----~~~~~lRi~~-~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+ ++.+.. ..+..+||.. +...+.+.++..++.|+.++.
T Consensus 337 ~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 337 SHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQ 381 (385)
T ss_pred HhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHh
Confidence 88 555543 3478999964 344577889999999998886
No 320
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=3e-17 Score=155.11 Aligned_cols=164 Identities=18% Similarity=0.139 Sum_probs=117.6
Q ss_pred CcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 15 SRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 15 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
++++.++...+|+++|+++.|.+..++++||+.|+..++..+ .++| |+|++....|.+............
T Consensus 63 Ysr~~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~al-----l~~G-----d~Vv~~~~~y~~t~~~~~~~l~~~ 132 (436)
T PRK07812 63 YTRIMNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNL-----AGAG-----DHIVSSPRLYGGTYNLFHYTLPKL 132 (436)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHH-----hCCC-----CEEEEeCCcchHHHHHHHHHhhcC
Confidence 344568889999999999999999999999999999999877 4567 999999888755332211111000
Q ss_pred cccccCCCCCCCceecc-CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 95 EAIRGFGPLLPGHLKVD-FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
+ ..+..++ ..|+++++++++ +++++|+++++.|++|.+.+ +++|.++|++||+++|+|++++.
T Consensus 133 G---------i~v~~vdd~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~ 196 (436)
T PRK07812 133 G---------IEVSFVEDPDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT 196 (436)
T ss_pred e---------EEEEEECCCCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc
Confidence 1 1222222 237888888776 67999999999999999999 99999999999999999999862
Q ss_pred CcccccCcccccCCCCCcEE--EecccccC-Cccchhhhee
Q 017259 174 LARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA 211 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~ 211 (374)
. .. ........|++ |++|.++| |- -+|+++.
T Consensus 197 ~-~~-----~~pl~~GaDivv~S~tK~lgg~G~-~i~G~vv 230 (436)
T PRK07812 197 P-YL-----IRPLEHGADIVVHSATKYLGGHGT-AIAGVIV 230 (436)
T ss_pred c-cc-----CCchhcCCCEEEEecccccCCCCC-eEEEEEE
Confidence 1 11 11122345655 77799985 43 3455443
No 321
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.75 E-value=4.7e-17 Score=143.14 Aligned_cols=168 Identities=18% Similarity=0.174 Sum_probs=132.5
Q ss_pred cccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 12 TLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.+.+++..+|-.+.|+++++.+.|--..+.++||..|+..|+..+ ...| |+|+..+.-|-|........-
T Consensus 53 G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~l-----a~aG-----D~iVss~~LYGGT~~lf~~tl 122 (426)
T COG2873 53 GNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNL-----AGAG-----DNIVSSSKLYGGTYNLFSHTL 122 (426)
T ss_pred CceeeeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHh-----ccCC-----CeeEeeccccCchHHHHHHHH
Confidence 445556778999999999999987778899999999999999999 5567 999999888866543332221
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
. -+..++.++.-+|++.++++|+ ++||+|++|+..||.+.+.+ +++|.++||+||+++|+|.+.
T Consensus 123 ~---------~~Gi~v~fvd~~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~ 186 (426)
T COG2873 123 K---------RLGIEVRFVDPDDPENFEAAID---ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTF 186 (426)
T ss_pred H---------hcCcEEEEeCCCCHHHHHHHhC---cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCC
Confidence 1 1224567777778999999998 78999999999999999998 999999999999999999998
Q ss_pred cCCcccccCcccccCCCCCcEE--EecccccC-CccchhhheeC
Q 017259 172 SGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD 212 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~G~~~~~ 212 (374)
+.. +.+...+...|++ |.+|.++| |- .+|.++..
T Consensus 187 atp------yl~rP~~hGADIVvHS~TK~igGhGt-~iGG~iVD 223 (426)
T COG2873 187 ATP------YLCRPIEHGADIVVHSATKYIGGHGT-AIGGVIVD 223 (426)
T ss_pred Ccc------eecchhhcCCCEEEEeecccccCCcc-ccceEEEe
Confidence 631 2333334456766 88899997 77 77876654
No 322
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=3.6e-17 Score=146.78 Aligned_cols=306 Identities=19% Similarity=0.225 Sum_probs=207.7
Q ss_pred hHHHHHHHhccc--cCc---CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe
Q 017259 2 KALQEQAEKLTL--SSR---AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC 76 (374)
Q Consensus 2 ~a~~~~~~~~~~--~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~ 76 (374)
+++.+.+++... .++ .+....+.++++..+++.|.+..+..+-|-..+...+..+ +.+| .-|+..
T Consensus 158 ~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l-----~~~g-----sLIiSD 227 (519)
T KOG1357|consen 158 EASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSL-----LGKG-----SLIISD 227 (519)
T ss_pred hHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCccee-----ecCC-----cceeec
Confidence 466777776444 233 2678889999999999999998877777766666666655 5555 555555
Q ss_pred ccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHh---------c-CCcEEEEEEccccCCCCcccC
Q 017259 77 CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---------S-GDQIAGFLFEPIQGEAGVIIP 146 (374)
Q Consensus 77 ~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---------~-~~~~~~vi~~~~~~~~g~~~~ 146 (374)
+-. |+......-+++ .......+||+++||+.|++ + +.+.-.++++.+.++.|.++.
T Consensus 228 elN-HaSi~~GaRLSg------------AtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~ 294 (519)
T KOG1357|consen 228 ELN-HASLITGARLSG------------ATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD 294 (519)
T ss_pred ccc-chheeccccccC------------ceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc
Confidence 544 666555444443 44667788999999999985 1 223457788889999999998
Q ss_pred ChhHHHHHHHHHHhcCCEEEEecccc-C-CcccccCcccccCCCCC---cEE--EecccccCCccchhhheeCHHHHhhc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---DMV--ILGKALGGGVIPVSAVLADKEVMLCI 219 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~-~-~~~~g~~~~~~~~~~~~---d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~ 219 (374)
+.++..+++++..+++.||+|+ | .+..|.. ....++.+| |+. +|.|+++++ .|++.+++++++.+
T Consensus 295 ----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrg-vce~~g~d~~dvDImMGtftKSfga~---GGyiagsk~lid~l 366 (519)
T KOG1357|consen 295 ----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRG-VCEYFGVDPEDVDIMMGTFTKSFGAA---GGYIAGSKELIDYL 366 (519)
T ss_pred ----cHHHHHhhccccEEEEeeccccccccCCCCcc-eeeccCCCchhheeecceehhhcccc---cceecCcHHHHhhh
Confidence 9999999999999999999999 3 3455543 445555544 333 788988832 24688999999999
Q ss_pred CCCCCCCCC--CCCHHHHHHHHHHHHHHhhh-------cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe
Q 017259 220 QPGEHGSTF--GGNPLASAVAIASLDVIRDE-------KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 290 (374)
Q Consensus 220 ~~~~~~~~~--~~~~~~~~aa~~al~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~ 290 (374)
+.......| +.+++.++....+++.+..+ ...+++..+..+++..++..+ ++..-...+..+-+.+
T Consensus 367 rt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-----fivyG~~dSpVvplll 441 (519)
T KOG1357|consen 367 RTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-----FIVYGNNDSPVVPLLL 441 (519)
T ss_pred ccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-----EEEecCCCCCcceeee
Confidence 865554444 44666666667777776431 345677777888877777653 2221122222222222
Q ss_pred ccCCCchhHHHHHHHHHHCCeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 291 DKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
-... ....+.+.|+++++.+.-.+ ....|++.+..++.|+++++++.+.++=+
T Consensus 442 ~~~~---k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 442 YGPA---KIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred cCcc---cccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 1111 35678889998865553221 34569998899999999999999877654
No 323
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.75 E-value=1.2e-16 Score=149.84 Aligned_cols=285 Identities=14% Similarity=0.063 Sum_probs=178.5
Q ss_pred CCcHHHHHHHHhcccCC---CeEEecC-ChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMFGY---DMVLPMN-TGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~---~~~~~~~-~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
...+++..+.|+++++. ++++|++ |||.+++.++..+ .+++ ++.+++ .+ .|+...........
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-----~~~~----~~~vi~-~g-~f~~~~~~~~~~~~-- 113 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-----LGAR----RVDHLA-WE-SFGSKWATDVVKQL-- 113 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-----CCCC----cceEEE-eC-HHHHHHHHHHHhhc--
Confidence 56677888888888874 2688775 9999999999877 2222 144443 44 45553222110000
Q ss_pred ccccCCCCCCCceecc--CC---CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 96 AIRGFGPLLPGHLKVD--FG---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~--~~---d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
+.. .+..++ ++ |+++ ++ .++.|.+.+..+.+|.+.| +++|++ ++||+++++|.+
T Consensus 114 ---g~~----~v~~~~~~~g~~~d~~~----i~----~~~~V~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~ 172 (378)
T PRK03080 114 ---KLE----DPRVLEADYGSLPDLSA----VD----FDRDVVFTWNGTTTGVRVP----VARWIG--ADREGLTICDAT 172 (378)
T ss_pred ---CCC----CceEeccCCCCCCCHhh----cC----CCCCEEEEecCCccceecc----chhhcc--ccCCCeEEEecc
Confidence 000 111111 11 3443 32 2456788888999999999 999999 889999999999
Q ss_pred ccCCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCC----------------------CC
Q 017259 171 QSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH----------------------GS 226 (374)
Q Consensus 171 ~~~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~----------------------~~ 226 (374)
++ ++ ..++..+ + .|++.+| |++++.. ++|+++.++++.+.+.+... ..
T Consensus 173 qs-~G--~~pidv~--~--iD~~~~s~~K~l~~P~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (378)
T PRK03080 173 SA-AF--ALPLDWS--K--LDVYTFSWQKVLGGEG-GHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQ 244 (378)
T ss_pred cc-cc--cCCCCHH--H--CcEEEEehhhhCCCCC-ceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCC
Confidence 98 32 1222222 2 3777665 9998776 78999999988877654210 11
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCcee-eEEEEeeeEEEEeccCCCchhHH
Q 017259 227 T-FGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAY 300 (374)
Q Consensus 227 ~-~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~ 300 (374)
+ +.++..+..++.++++.+.+. .+.++.+++.+++++.|+++.... .... .....+.++.|.+++.. .....
T Consensus 245 t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~-~~~~~~~~~s~~i~~~~~~~~~-~~~~~ 322 (378)
T PRK03080 245 TINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWAT-PLVADPATRSNTSVTLDFVDAQ-AAVDA 322 (378)
T ss_pred cccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcc-cccCCccccCccEEEEEcCCch-HHHHH
Confidence 1 233555556667788887653 345666667777777776553210 0111 11122346666665410 00234
Q ss_pred HHHHHHHHCCeEeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 301 DICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
++...|.++|++++.+. .+.+|++++..++++|+++++++|+++++ ++
T Consensus 323 ~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~-~~ 374 (378)
T PRK03080 323 AAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFE-RL 374 (378)
T ss_pred HHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 57778888898886532 47899999999999999999999999887 54
No 324
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.74 E-value=6.6e-16 Score=140.01 Aligned_cols=298 Identities=13% Similarity=0.163 Sum_probs=174.7
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
.++-++.++++.+++ +|+||+|+|++++++++..... .+ +....+||.....|......+..+-.. ++...+
T Consensus 87 ~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~----~~-~~~~k~iitl~~eH~~v~~s~~~l~~~-g~~Vt~ 160 (428)
T KOG1549|consen 87 VEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARF----FG-DKTKKHIITLQTEHPCVLDSCRALQEE-GLEVTY 160 (428)
T ss_pred HHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhcc----cc-ccccceEEEecccCcchhHHHHHHHhc-CeEEEE
Confidence 566788888887554 6999999999999999888421 22 101137777776654444444443322 222222
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~ 180 (374)
.|...+.. .|++.+++.|+ ++|+++.+..++|..|.+.| +++|.++|+++++.+++|.+|+ . |.
T Consensus 161 lpv~~~~~----~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-v---G~- 224 (428)
T KOG1549|consen 161 LPVEDSGL----VDISKLREAIR---SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-V---GK- 224 (428)
T ss_pred eccCcccc----ccHHHHHHhcC---CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-c---CC-
Confidence 22211111 17889999998 79999999999999999999 9999999999999999999997 2 22
Q ss_pred cccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcC--CCCCCC----CC---CCCHHHHHHHHHHHHHHhhh-
Q 017259 181 LASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQ--PGEHGS----TF---GGNPLASAVAIASLDVIRDE- 248 (374)
Q Consensus 181 ~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~--~~~~~~----~~---~~~~~~~~aa~~al~~~~~~- 248 (374)
...+..++++|+.++| |.++.. ++|+++.++. ...++ +...+. .+ ....+.+...-++.+....+
T Consensus 225 i~vDV~eln~D~~s~s~HK~ygp~--~iGaLYvr~~-~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~ 301 (428)
T KOG1549|consen 225 IPVDVQELNADFLSISAHKIYGPP--GIGALYVRRK-RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEM 301 (428)
T ss_pred ccccHHHcCchheeeecccccCCC--cceEEEEccC-CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhc
Confidence 2445567788988877 888742 2688888752 12222 111110 11 22333444444445554332
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHhCCCce-e--eEEEEeeeEEEEec--cCCCchhHHHHHHH-----------------
Q 017259 249 -KLAERSAHLGEELRQHLFKIQQQFPNYV-K--EVRGRGLFNAVEFD--KTALPVSAYDICLK----------------- 305 (374)
Q Consensus 249 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~--~~~~~g~~~~~~~~--~~~~~~~~~~~~~~----------------- 305 (374)
....++++...++...+... .+++. . .....+....+.++ ..-. ...+.-..
T Consensus 302 ~~~~~~~~~~~~~ll~~i~~~---~~~~~~~G~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~s~~a~~~~~~epsy 376 (428)
T KOG1549|consen 302 AYDEAIIKRLSEKLLMGIGQS---LPEVTLNGSGKSRYPGLVSLSFPYVEGES--LLMDLKDVALSSGSACTSASLEPSY 376 (428)
T ss_pred chhHHHHHHHHHHHHHHHhhh---CchhhccCCcccccccceeeecccccCcc--hhhhhhhhhhcccchhhcCCCCcch
Confidence 22344444444444443221 11111 0 11112333333333 1000 11111111
Q ss_pred -HHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcC
Q 017259 306 -MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM 352 (374)
Q Consensus 306 -l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~ 352 (374)
|+..|+.... ....+||+.+..++++|++++++.+++... .+..+
T Consensus 377 ~l~~~G~~~~~-~~~~iRis~G~y~t~~di~~~~~~i~~~v~-~~~~~ 422 (428)
T KOG1549|consen 377 VLRAIGVDEDL-AHSSIRISIGRYTTEEDIDYLVDAIKKLVS-LLREM 422 (428)
T ss_pred hhhhcCcchhh-hcceeEEeeeeeCcHHHHHHHHHHHHHHHH-hcccc
Confidence 2222221111 257899999999999999999999999988 55443
No 325
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.74 E-value=7.5e-17 Score=146.10 Aligned_cols=228 Identities=11% Similarity=0.030 Sum_probs=140.9
Q ss_pred CCCCcHHHHHHHHhcccCCCeEEe-cCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 18 FYNDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~~~-~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
.+.....++++.+++++|.+++++ ++|+++++..++..+ .++| |+|++.+++|.+........+..+.+
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al-----~~~g-----d~Vlv~~~~h~s~~~~~~~~g~~~~~ 125 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAV-----CGPG-----DKILIDRNCHKSVINGLVLSGAVPVY 125 (294)
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHc-----CCCC-----CEEEEeCCchHHHHHHHHHCCCEEEE
Confidence 446668889999999999887766 888889999888877 5677 99999999975544333322222222
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC-Cc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LA 175 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~-~~ 175 (374)
... .........-..|+++++++++++ ++++++++.++ +++|.+.+ +++|.++|+++|+++|+||+|+. +.
T Consensus 126 v~~--~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~ 197 (294)
T cd00615 126 LKP--ERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFR 197 (294)
T ss_pred ecC--ccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhhc
Confidence 110 000000000112799999999764 35777777654 56888887 99999999999999999999974 22
Q ss_pred ccccCcccccCCCCCcEE--EecccccCCccchhh-heeCHHHH--hhcCCC-CCCCCCCCCHHHHHHHHHHHHHHhh--
Q 017259 176 RSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSA-VLADKEVM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD-- 247 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~-~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~-- 247 (374)
..+. +.........|++ |++|+++ |+ +.|+ +..+++.. ..+... ....+.+++.+.+++..++++.+..
T Consensus 198 ~~~~-~~~~~~~~~~div~~S~hK~l~-g~-~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g 274 (294)
T cd00615 198 FHPI-LPSSAAMAGADIVVQSTHKTLP-AL-TQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEG 274 (294)
T ss_pred cCcc-cCcchhhcCCcEEEEchhcccc-hH-hHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 2221 1112222345655 6669874 44 5444 44443311 112111 1223456677777777777776543
Q ss_pred hcHHHHHHHHHHHHHHHHH
Q 017259 248 EKLAERSAHLGEELRQHLF 266 (374)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~ 266 (374)
+++.++..++.+++++++.
T Consensus 275 ~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 275 KELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 2455666666666666553
No 326
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.73 E-value=2.9e-16 Score=146.32 Aligned_cols=309 Identities=17% Similarity=0.212 Sum_probs=206.6
Q ss_pred CCcHHHHHHHHhcccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.++..+|++.|++++|++.+ +..+||.++-+..++.++.|. ..+| .++++|+.++-+.||.+.+...+.+-
T Consensus 581 ~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~-~~kg--e~hRnvClIPvSAHGTNPASA~Magm----- 652 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYL-ESKG--EGHRNVCLIPVSAHGTNPASAAMAGM----- 652 (1001)
T ss_pred HHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHH-Hhcc--CCcceeEEEeecccCCChhhHHhcCC-----
Confidence 45677899999999999986 777889999999999999887 5555 45688888899999999888877652
Q ss_pred cCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc---
Q 017259 99 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI--- 170 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea--- 170 (374)
+++.+.++ |+.+|+++.++|.++.+++++.-+. ..|...+ -++.++++.++||-.++.|.+
T Consensus 653 -------kvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPS-T~GvfE~---~i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 653 -------KVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPS-THGVFEE---GIDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred -------EEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccc-ccccccc---cHHHHHHHHHhcCCEEEecCCCcc
Confidence 22222222 7889999999888899998886543 3344333 399999999999999999964
Q ss_pred -ccCCcccccCcccccCCCCCcEE------EecccccCCccchhh-heeCHHHHhhcCCC-----------CCCCCC---
Q 017259 171 -QSGLARSGRMLASDWEEVRPDMV------ILGKALGGGVIPVSA-VLADKEVMLCIQPG-----------EHGSTF--- 228 (374)
Q Consensus 171 -~~~~~~~g~~~~~~~~~~~~d~~------s~sK~~~~G~~~~G~-~~~~~~~~~~~~~~-----------~~~~~~--- 228 (374)
+.|+.+.|.. ..|+. +|+-..|||- |.+. +...+.+...+-.. ....+.
T Consensus 722 AqVGlc~pGd~--------GaDV~HLNLHKTFcIPHGGGG-Pg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaa 792 (1001)
T KOG2040|consen 722 AQVGLCRPGDI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAA 792 (1001)
T ss_pred ceecccCCccc--------cccceeecccceeeecCCCCC-CCCCccchhhhccccCCCCCccCCCCCCCCCCccceecc
Confidence 5567655543 22333 6666666544 4434 43344443332111 000111
Q ss_pred -CCCHHHHHHHHHHHHHHhhhcHHHHH---HHHHHHHHHHHHHHHHhCCCceee-EE-EEeeeEEEEeccCCC--chhHH
Q 017259 229 -GGNPLASAVAIASLDVIRDEKLAERS---AHLGEELRQHLFKIQQQFPNYVKE-VR-GRGLFNAVEFDKTAL--PVSAY 300 (374)
Q Consensus 229 -~~~~~~~~aa~~al~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~-~~-~~g~~~~~~~~~~~~--~~~~~ 300 (374)
.++..-+...++-++.+...++.+.. .-+.+++.++|+.-.. ++.. .. -..+=+.+++...+. +.++.
T Consensus 793 P~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYk----il~~~~~~~vaHEFIlD~r~fK~~agieav 868 (1001)
T KOG2040|consen 793 PWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYK----ILFRGENGLVAHEFILDLRPFKKTAGIEAV 868 (1001)
T ss_pred CCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccc----eeEecCCcceeeeeeeechhhccccCCcHH
Confidence 22444455678888888776544333 3367788777765421 2221 11 112223344433322 46788
Q ss_pred HHHHHHHHCCeEeccCC---CCEEEEecCCCCCHHHHHHHHHHHHHHHhccCCcCCC--CCCCCCC
Q 017259 301 DICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK--PKPADAP 361 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~---~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~~~~~~--~~~~~~~ 361 (374)
+++++|++.|+...... .++++|-|....+.+|+|++++++..+.+ ++..++. .++..+|
T Consensus 869 DvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIre-EI~~ie~G~~dk~~n~ 933 (1001)
T KOG2040|consen 869 DVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIRE-EIAQIEEGRQDKRNNP 933 (1001)
T ss_pred HHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHH-HHHHHHccCCCcccCc
Confidence 99999999999876543 68999999999999999999999998888 7665555 3443443
No 327
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.72 E-value=1.1e-15 Score=143.44 Aligned_cols=301 Identities=13% Similarity=0.116 Sum_probs=176.1
Q ss_pred cHHHHHHHHhcccCCC---eEEecCChH-HHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Cccc
Q 017259 22 KFPVFAERLTSMFGYD---MVLPMNTGA-EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEA 96 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~~---~~~~~~~gs-~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~ 96 (374)
+..++++.+++++|.+ .+++++++| .++..++.+++.. ..+| +.||++.-+ |..+..+..+.+ .+.+
T Consensus 106 l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~--~~~g-----d~VI~p~~t-h~S~~kAi~~~G~~pv~ 177 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK--RPKA-----KYVIWPRID-QKSCIKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc--CCCC-----CEEEEECcC-hHHHHHHHHHcCCeEEE
Confidence 3456788888888887 799999999 6787777766421 1134 888888877 444444444433 2222
Q ss_pred cccCCCCCCCceeccCC-CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 97 IRGFGPLLPGHLKVDFG-DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.... ...-.+. |+++|+++|++.. ..+.+++.++..+.+|...+ +++|.++|++||+++|+|++|+..
T Consensus 178 Vd~~------~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~~ 247 (444)
T TIGR03531 178 IETV------LDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGLQ 247 (444)
T ss_pred eeee------ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcCc
Confidence 2100 0001122 8999999998543 33444444444333344455 999999999999999999999832
Q ss_pred cccccCcccccCCC-CCcEE--EecccccCCccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--h
Q 017259 175 ARSGRMLASDWEEV-RPDMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--E 248 (374)
Q Consensus 175 ~~~g~~~~~~~~~~-~~d~~--s~sK~~~~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~ 248 (374)
...-..+....... ..|++ +++|.+.... ..|.++. ++++.+.+.....+.. .+.+++.+...++....+ +
T Consensus 248 ~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~y~g~~--~~s~~~~~~~~ll~~G~~g~~ 324 (444)
T TIGR03531 248 SNKYMELINKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKSYPGRA--SASPSLDVLITLLSLGSKGYL 324 (444)
T ss_pred ChhhhhhhhccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHhccCCC--CChHHHHHHHHHHHhCHHHHH
Confidence 11000000011111 23555 4459877422 2333445 6677777764322211 233455555544443222 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCe----EeccCC-------
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI----LAKPTH------- 317 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi----~v~~~~------- 317 (374)
++.++..++.+++.+.|+++..+....+..++.+..-+.+.+.... +.+..++...|..++| +|.++.
T Consensus 325 ~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~ 403 (444)
T TIGR03531 325 ELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGC 403 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-ccCHHHHHHHHHhCCCCCceeecCCCceEECCE
Confidence 6677788888999999988876653344445444444555554211 1257788888888755 222321
Q ss_pred -------------CCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 318 -------------DTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 318 -------------~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
-.++-++.....+.+|+|.++++|+++
T Consensus 404 ~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 404 EFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 124444545678999999999999875
No 328
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=6.2e-15 Score=140.97 Aligned_cols=290 Identities=14% Similarity=0.053 Sum_probs=175.2
Q ss_pred CCcHHHHHH----HHhcccCCC-eEEe----cCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC-----CCccc
Q 017259 20 NDKFPVFAE----RLTSMFGYD-MVLP----MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF-----HGRTL 85 (374)
Q Consensus 20 ~~~~~~l~~----~l~~~~~~~-~~~~----~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y-----hg~~~ 85 (374)
....+++++ +..+.++.+ ..+. .+||+.|+..++.++ .++| |+|+..+-.. |+...
T Consensus 75 ~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL-----~~pg-----D~Il~~d~~~gGhl~H~~~~ 144 (475)
T PLN03226 75 NEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTAL-----LQPH-----DRIMGLDLPHGGHLSHGYQT 144 (475)
T ss_pred ChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHh-----CCCC-----CEEEECCCCcCcchhhhhhh
Confidence 345555654 233344444 3332 489999999999998 5677 9999855321 22211
Q ss_pred ccccccCCccccccCCCCCCCceeccCC------CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 017259 86 AAISMSCDNEAIRGFGPLLPGHLKVDFG------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS 159 (374)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~ 159 (374)
....++....+ .......++ |+++|++.+.++ +++.+++. .+..+...+ +++|.++|+
T Consensus 145 ~g~~~s~~~~~--------~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~--~S~~s~~~D----~a~i~~ia~ 208 (475)
T PLN03226 145 DGKKISATSIY--------FESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAG--ASAYPRDWD----YARMRKIAD 208 (475)
T ss_pred cccccccceEE--------EEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEe--cCcCCCccC----HHHHHHHHH
Confidence 11111111100 001111223 899999988764 35555552 233466666 999999999
Q ss_pred hcCCEEEEecccc-CCcccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHh--------------hcCCC
Q 017259 160 KYNILMIADEIQS-GLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVML--------------CIQPG 222 (374)
Q Consensus 160 ~~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~--------------~~~~~ 222 (374)
++|.++++|++|+ |+. +........+ ..|++ |++|++.|.. .|++++++++.+ .+...
T Consensus 209 ~~ga~LlvD~AH~~Gli--~~~~~~~p~~-~~Div~~t~hK~L~GP~--Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a 283 (475)
T PLN03226 209 KVGALLMCDMAHISGLV--AAQEAASPFE-YCDVVTTTTHKSLRGPR--GGMIFFRKGPKPPKGQGEGAVYDYEDKINFA 283 (475)
T ss_pred HcCCEEEEEchhhhCcc--cCCCCCCCCC-CCeEEEecCcccccCCC--ceEEEEchhhcccccCCCccHHHHHHHhccc
Confidence 9999999999998 432 2111101111 45666 5669997654 366777765331 11111
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchh
Q 017259 223 -EHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 298 (374)
Q Consensus 223 -~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 298 (374)
......++++...++..++++.+... .+.+++.++.+++.+.|++.+.. ++.. ....+++++++... +.+
T Consensus 284 ~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~---l~~~-~t~~hi~lv~~~~~--gi~ 357 (475)
T PLN03226 284 VFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYK---LVTG-GTDNHLVLWDLRPL--GLT 357 (475)
T ss_pred cCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCE---EEcC-CCCCCEEEEEccCC--CCC
Confidence 11122244566677777888887653 46788888888888888774321 2211 11246666666321 125
Q ss_pred HHHHHHHHHHCCeEeccC---------CCCEEEEe----cCCCCCHHHHHHHHHHHHHHHh
Q 017259 299 AYDICLKMKERGILAKPT---------HDTIVRLT----PPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 299 ~~~~~~~l~~~Gi~v~~~---------~~~~lRi~----~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..++.+.|.+.||.+... .+..+|+. .+...+++|++++.+.|.++++
T Consensus 358 ~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 358 GSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 678888899999998643 35678983 3467789999999999999987
No 329
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.72 E-value=2.5e-16 Score=146.41 Aligned_cols=284 Identities=13% Similarity=0.122 Sum_probs=175.7
Q ss_pred CCcHHHHHHHHhcccCC--C-eEEec-CChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMFGY--D-MVLPM-NTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~--~-~~~~~-~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
...+++..+.++++++. + +++|+ +|||.+++.++..+. . + +.+++..+.| |....-.+-..
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~-----~-~-----~~l~i~~G~~-~~~~~~~a~~~--- 104 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI-----E-K-----KSLHLSFGEF-SSKFAKAVKLA--- 104 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc-----c-c-----cccEEecCHH-HHHHHHHHHhh---
Confidence 56677889999998875 2 57775 779999999997773 1 1 3334444444 32211111110
Q ss_pred ccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
|+...+..++.+.-+.++..+. +++++|.+.+..+.+|.+.| +++| ++++|+++++|.+++ ++
T Consensus 105 ------~~~~~~~~~~~~~~~~~~~~~~---~~~~lV~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g 167 (361)
T TIGR01366 105 ------PWLGEPIIVTADPGSAPEPQAD---PGVDVIAWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-AG 167 (361)
T ss_pred ------hccCCceEEecCCCCCCCCccC---CCCCEEEEcccCCccceecc----cccc---cccCCCeEEEEcCcc-cc
Confidence 0000111112111112222222 58999999999999999998 8777 589999999999998 31
Q ss_pred ccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCC---------------------CCCCCCCH
Q 017259 176 RSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH---------------------GSTFGGNP 232 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 232 (374)
+.+...+ . .|++.+| |++++.- .+++++.++++.+++.+... ...+.++.
T Consensus 168 --~~~idv~--~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i 240 (361)
T TIGR01366 168 --GLPVDIA--E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAI 240 (361)
T ss_pred --CCCCCHH--H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchH
Confidence 1222222 1 5777666 9888432 33445667777666542211 11234455
Q ss_pred HHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeE-EEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 233 LASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 233 ~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
....+..++++.+.+. ...++.+++.+++++.+++..... .+.... ........+.++++. +..++.+.|.
T Consensus 241 ~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~-~~~~~~~~~s~~v~~v~~~~g~---~~~~v~~~L~ 316 (361)
T TIGR01366 241 ATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYAT-PFVTDPGKRSQVVGTIDFVDDI---DAATVAKILR 316 (361)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCChhhcccceEEEECCCcc---CHHHHHHHHH
Confidence 5555777888877654 345666777777877777765211 111111 111222233334433 6788999999
Q ss_pred HCCeEeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 308 ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 308 ~~Gi~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++||.+.++. .+.+||+....+|.+|+++++++|+++++
T Consensus 317 ~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 317 ANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred HCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 9999997652 56899999999999999999999999887
No 330
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.72 E-value=3.8e-15 Score=140.54 Aligned_cols=307 Identities=13% Similarity=0.025 Sum_probs=181.8
Q ss_pred CcHHHHHHHHhcccCCC----eEEe--cCChHHHHHHHHHHHHHcccc---cccCCCCccEEEEeccCCCCccccccccc
Q 017259 21 DKFPVFAERLTSMFGYD----MVLP--MNTGAEGVETALKLARKWGYV---KKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~----~~~~--~~~gs~a~~~al~~~~~~~~~---~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
...++..+++++++|.+ ++++ |+|||||++.|+..++..... ..|....+..|++.+-. |.....+....
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~-H~sv~ka~~~l 158 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNV-QVCWEKFARYF 158 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcc-hHHHHHHHHHc
Confidence 34445777778777654 4655 899999999999887632100 11211111345555544 54443333222
Q ss_pred CCccccccCCCCCCC-ceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCE
Q 017259 92 CDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NIL 164 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~------~i~ 164 (374)
+- .....|...+ .. -|+++|+++|+ +++.+|++...++.+|.+.| +++|.++|+++ |++
T Consensus 159 g~---~v~~i~~d~~~~~----vd~~~L~~~i~---~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~ 224 (431)
T TIGR01788 159 DV---ELREVPMDPGRYV----IDPEQVVEAVD---ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIP 224 (431)
T ss_pred Cc---eeEEEecCCCcee----eCHHHHHHHHh---hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCce
Confidence 21 1001111110 01 17899999997 46888888889999999999 99999999999 999
Q ss_pred EEEeccccCCcc---cccCcccccCCCCCcEEEec--ccccCCccchhhheeCHH--HHhhcCCC--CC-----CCCCCC
Q 017259 165 MIADEIQSGLAR---SGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG--EH-----GSTFGG 230 (374)
Q Consensus 165 li~Dea~~~~~~---~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~--~~~~~~~~--~~-----~~~~~~ 230 (374)
+++|.+|+|+.. .+.. ..+......|.+++| |.+.+.. ++|+++.+++ +.+.+... .. ..+...
T Consensus 225 ~HvDaaq~g~~~p~~~~~~-~~~~~~~~~DSis~s~HK~~~~P~-g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~ 302 (431)
T TIGR01788 225 IHVDAASGGFIAPFVYPDL-EWDFRLPRVKSINVSGHKYGLVYP-GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNF 302 (431)
T ss_pred EEEecccHHHHHHHhCCCc-hhhcCCCCceEEEECchhccCCCC-CcEEEEEeChHHcchhheecccccCCCCCCcceec
Confidence 999999996321 1211 111112245677777 8765666 7788776653 32332110 01 012222
Q ss_pred CH--HHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE-EEeeeEEEEeccCC-CchhHHHHH
Q 017259 231 NP--LASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTA-LPVSAYDIC 303 (374)
Q Consensus 231 ~~--~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~ 303 (374)
+. ......+..++.+..+ ++.++..++.+++.++|++.. .+....+ +...++.|.++... ...+..++.
T Consensus 303 sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~----~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~ 378 (431)
T TIGR01788 303 SRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG----PFEIISDGSGIPLVAFKLKDDADPGYTLYDLS 378 (431)
T ss_pred CchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC----CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHH
Confidence 22 2233344444444443 455666667777777776542 2221122 34566666665310 012567899
Q ss_pred HHHHHCCeEeccC-------CCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 304 LKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 304 ~~l~~~Gi~v~~~-------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
+.|.++|+.+... +...+|++.....+.+.++++++.|++++. .+
T Consensus 379 ~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~-~~ 430 (431)
T TIGR01788 379 HRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALA-YL 430 (431)
T ss_pred HHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH-hh
Confidence 9999999875221 235789987667789999999999999887 54
No 331
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.70 E-value=1.4e-15 Score=140.56 Aligned_cols=284 Identities=12% Similarity=0.077 Sum_probs=181.7
Q ss_pred CcHHHHHHHHhcccCC-C--eEEecCC-hHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccc
Q 017259 21 DKFPVFAERLTSMFGY-D--MVLPMNT-GAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEA 96 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~-~--~~~~~~~-gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 96 (374)
..++++.++|+++++. + ++++++| ||.|+++++..+ ..+| +++++...++.|....-..-.. ...
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl-----~~~~-----~~~l~i~~G~fg~r~~~~a~~~-g~~ 105 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL-----LAEG-----KVADYIVTGAWSKKAAKEAKKY-GVV 105 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc-----CCCC-----CeEEEEECCHHHHHHHHHHHHh-CCc
Confidence 4567788888888874 2 5766655 999999999888 4456 7777777766665443222110 000
Q ss_pred cccCCCCCCCceeccCC---CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 97 IRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.... .+ ...++. ++++++ ++ +++++|.+.+..+++|...+ ++++.+++++++|.+++
T Consensus 106 ~~~~----~~-~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss- 165 (349)
T TIGR01364 106 NVVA----SG-KEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN- 165 (349)
T ss_pred EEEe----cc-ccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-
Confidence 0000 00 001122 344433 22 47889999998888998653 67777899999999998
Q ss_pred CcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCC-----------CCC-CCCCCHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----------HGS-TFGGNPLASAVAI 239 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~aa~ 239 (374)
++ +.+...+. + |++.+| |+++ .. ++|+++.++++.+.+.+.. ... .++++.....+..
T Consensus 166 ~g--~~~id~~~--~--d~~~~ssqK~lg-P~-Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~ 237 (349)
T TIGR01364 166 IL--SRPIDVSK--F--GLIYAGAQKNIG-PA-GLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSG 237 (349)
T ss_pred cc--CccCCHHH--c--cEEEEecccccC-CC-ceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHH
Confidence 21 22333332 2 355554 9986 44 5788899998887664421 012 2366788888888
Q ss_pred HHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc
Q 017259 240 ASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP 315 (374)
Q Consensus 240 ~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~ 315 (374)
++++++.++ ++.++.+.+.+++++.|+++..............+..+.|.+++.. ...++.+.+.++|+.+.+
T Consensus 238 ~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~---~~~~~~~~~~~~Gi~~~~ 314 (349)
T TIGR01364 238 LVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE---LEKRFLKEAEERGLVSLK 314 (349)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh---HhHHHHHHHHHCCCcccC
Confidence 999988654 4556666777777777776631100011101122355666665431 346787889999996666
Q ss_pred CC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 316 TH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 316 ~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+. .+.+|+++...++.+|+++++++|+++.+
T Consensus 315 ~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 315 GHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred CccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 64 47899999999999999999999998776
No 332
>PLN03032 serine decarboxylase; Provisional
Probab=99.70 E-value=1.2e-14 Score=134.44 Aligned_cols=275 Identities=14% Similarity=0.076 Sum_probs=174.0
Q ss_pred HHHHHHHHhcccCCC--eE--EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 23 FPVFAERLTSMFGYD--MV--LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~--~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
.+++.+++++++|.+ ++ +||+|||+|+..++..++... ++ ..|++.. .-|.....+....+..
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~---~~-----~~vi~s~-~~H~Sv~kaa~~lg~~---- 134 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVF---PD-----GILYASR-ESHYSVFKAARMYRME---- 134 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhC---CC-----cEEEeCC-CceeHHHHHHHHcCCC----
Confidence 344667777777653 45 999999999999999886431 22 3454444 4455544443333211
Q ss_pred cCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-----CEEEEe
Q 017259 99 GFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-----ILMIAD 168 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~-----i~li~D 168 (374)
+..+|.+ |+++|+++|++...++.+++++...+.+|.+.| +++|.++|++|| +++++|
T Consensus 135 --------~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvD 202 (374)
T PLN03032 135 --------AVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCD 202 (374)
T ss_pred --------CeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEE
Confidence 1122221 899999999864346778888888888999999 999999999997 589999
Q ss_pred ccccCCccc----ccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCC-----CCCCCCC--CHHHH
Q 017259 169 EIQSGLARS----GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGG--NPLAS 235 (374)
Q Consensus 169 ea~~~~~~~----g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~ 235 (374)
.+++++... ...+.+ ....|.+++| |.++.+. ++|.++.+++..+.+.... ...+..+ +....
T Consensus 203 aA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~-g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~ 278 (374)
T PLN03032 203 GALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPM-PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAP 278 (374)
T ss_pred ccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCc-CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHH
Confidence 999853110 011111 1246777777 7666577 7788888877666553211 1112333 44566
Q ss_pred HHHHHHHHHHhhhcH---HHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE
Q 017259 236 AVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 312 (374)
Q Consensus 236 ~aa~~al~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 312 (374)
+..+.+++.+..+++ .++..++.+++.++|++. +......+..+.+.|..+. .+. +.+|..
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-----~~~~~~~p~~~~V~f~~~~------~~~-----~~~~w~ 342 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-----GLTCRLNELSSTVVFERPM------DEA-----FIKKWQ 342 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcEEECCCceEEEEcCCC------cHh-----Hhheee
Confidence 778888888776644 555556677777777654 2222223334444443331 121 235776
Q ss_pred eccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 313 AKPTHDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 313 v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+.+. .+.+|+++....+.+.++++++.|++
T Consensus 343 l~~~-~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 343 LACE-GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eccc-CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 6654 46899988877888999999988764
No 333
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.70 E-value=3.9e-16 Score=145.17 Aligned_cols=290 Identities=17% Similarity=0.211 Sum_probs=177.9
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.++++.+|..++|+++++++.|.+.++.++||+.|+.+++..+ .++| |+|++....|.+..........
T Consensus 56 ~~Y~r~~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~al-----l~~G-----D~Vl~~~~~yg~t~~~~~~~~~ 125 (384)
T PRK06434 56 YIYTRWGNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSL-----IKKG-----KRILSISDLYGQTFYFFNKVLK 125 (384)
T ss_pred cceeCCCChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHH-----hCCC-----CEEEEecCccchHHHHHHHHHH
Confidence 44566789999999999999999999999999999999999877 5667 9999988777554433211111
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
. ....+.+++.++.+.++ ++ ++++++++++.+.|+++.+.+ +++|.++|++++ +++|.+++
T Consensus 126 ~---------~Gi~v~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~ 186 (384)
T PRK06434 126 T---------LGIHVDYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFA 186 (384)
T ss_pred h---------cCcEEEEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCC
Confidence 1 11223344443334443 33 247999999999999998888 999999999998 46699975
Q ss_pred CCcccccCcccccCCCCCcEEEec--ccccC-Cccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 173 GLARSGRMLASDWEEVRPDMVILG--KALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~-G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
.. ..+. ..+...|++++| |.++| |-+-.|.++. ++++.+.++..........+++.++.++..++.+ +
T Consensus 187 s~-~~~~-----pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL--~ 258 (384)
T PRK06434 187 SP-YNQN-----PLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL--G 258 (384)
T ss_pred Cc-ccCC-----chhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH--H
Confidence 21 1222 223456777555 98876 3102444555 4555555542211223344666655555555544 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHh----CCCce---eeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe--------
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQ----FPNYV---KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA-------- 313 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~----~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-------- 313 (374)
...++.+++..++.+.|+..... +|+.. ....+.|.++.|+++.. .....|.+.|.--.+.+
T Consensus 259 ~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~---~~~~~f~~~l~l~~~~~slG~~~sl 335 (384)
T PRK06434 259 LRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSM---EDVHKFIRNLEIPMVAASLGGVESL 335 (384)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCH---HHHHHHHHhCCcceEccCCCCCCee
Confidence 34666777777777777653210 11110 01235688888888632 13445555543211111
Q ss_pred --ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 --KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 --~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. ..+.+|+++++ |+.+.+++-|.++++
T Consensus 336 ~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 336 ITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred eECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 110 14789999443 456667777777764
No 334
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.70 E-value=1e-15 Score=142.03 Aligned_cols=284 Identities=10% Similarity=0.045 Sum_probs=185.3
Q ss_pred CcHHHHHHHHhcccCC-C--eE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc-CCcc
Q 017259 21 DKFPVFAERLTSMFGY-D--MV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS-CDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~-~--~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~~ 95 (374)
+.+++..++|+++++. + ++ ++++||+.+++.++..+ ..+| +++++...+..|....-..-. +...
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl-----~~~g-----~~~l~i~~G~fg~r~~~~a~~~g~~~ 117 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNL-----LGGG-----KKADYVDTGSWSKKAIKEAKKYGEVN 117 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhc-----CCCC-----CeEEEEECCHHHHHHHHHHHHhCCce
Confidence 6788899999998874 2 34 66688999999999888 5566 677766666656543222111 1111
Q ss_pred ccccCCCCCCCceeccCCCHHHHHH-HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 96 AIRGFGPLLPGHLKVDFGDITALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
.. ...+. . ...+..++++ +++ +++++|.+.+..+++|.+.++ +++| ||+++++|.+++ +
T Consensus 118 ~~-~~~~~---~---g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~ 177 (360)
T PRK05355 118 VA-ASSED---D---GFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-I 177 (360)
T ss_pred EE-ecccc---c---CCCCCCChhhccCC---CCCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-c
Confidence 00 00000 0 0012333333 554 367889999999999988721 6665 899999999998 2
Q ss_pred cccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCC-C-----------CCCCCCCCHHHHHHHHH
Q 017259 175 ARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPG-E-----------HGSTFGGNPLASAVAIA 240 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~aa~~ 240 (374)
+ +.++..+. + |++.+| |+++ .. ++|+++.++++.+.+.+. . ....++++.....+..+
T Consensus 178 g--~~~idv~~--~--d~~~~ssqK~lg-P~-Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~ 249 (360)
T PRK05355 178 L--SRPIDVSK--F--GLIYAGAQKNIG-PA-GLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGL 249 (360)
T ss_pred c--CccCCHHH--c--cEEEEecccccc-CC-ceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHH
Confidence 1 22333332 2 366555 9986 44 678899999988777652 1 11235668888888999
Q ss_pred HHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC
Q 017259 241 SLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT 316 (374)
Q Consensus 241 al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 316 (374)
+++.+.++ ++.++.+++.+++++.|+++... ..........+..+.|.+++.. ...++.+.+.++|+.+.++
T Consensus 250 aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~-~~~~~~~~rs~~v~sf~~~~~~---~~~~~~~~~~~~Gi~~~~~ 325 (360)
T PRK05355 250 VFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFY-RNPVAPEDRSRMNVPFTLADEE---LDKKFLAEAKAAGLVGLKG 325 (360)
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCChhhcCCcEEEEEcCChH---HHHHHHHHHHHCCCcccCC
Confidence 99988664 45666677777777777765311 0011111223355666665532 4467878899999999666
Q ss_pred C--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 317 H--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
. .+.+|+++...+|.+|+++++++|+++++
T Consensus 326 ~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 326 HRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4 47899999999999999999999999886
No 335
>PRK04311 selenocysteine synthase; Provisional
Probab=99.69 E-value=1.9e-14 Score=136.61 Aligned_cols=293 Identities=17% Similarity=0.163 Sum_probs=177.0
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC--C-cccccccccCCccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH--G-RTLAAISMSCDNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh--g-~~~~~~~~~~~~~~ 96 (374)
.+.+..+++.+++++|.+.+++++|++.|+..++..+ .+| ++||+.+..+. | .......+. ..+
T Consensus 126 g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l------~~G-----deVIvs~~e~~~~ggs~~i~~~~~-~~G- 192 (464)
T PRK04311 126 GSRDRALAALLCALTGAEDALVVNNNAAAVLLALNAL------AAG-----KEVIVSRGELVEIGGAFRIPDVMR-QAG- 192 (464)
T ss_pred chHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHh------CCC-----CEEEEcchhhhhcCcchhhHHHHH-HCC-
Confidence 3446789999999999999999999999998888544 456 89999876432 2 111100010 001
Q ss_pred cccCCCCCCCceeccC---CCHHHHHHHHHhcCCcEEEEEEccccCC--CC--cccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 97 IRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGE--AG--VIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~~~vi~~~~~~~--~g--~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..+..+.. .++++++++|+ ++|+++++++..|+ .| ...+ +++|+++|++||+++|+|.
T Consensus 193 --------~~l~~v~~~~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~ 257 (464)
T PRK04311 193 --------ARLVEVGTTNRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDL 257 (464)
T ss_pred --------cEEEEECCCCCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEEC
Confidence 11122222 36888999887 57899999888775 23 4566 9999999999999999999
Q ss_pred cccCCcc---c---ccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 170 IQSGLAR---S---GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 170 a~~~~~~---~---g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
+.+-++. . +.+..........|++++| |.++|+ ..|++++++++++.++.......+...-..+++..+.
T Consensus 258 gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~ 335 (464)
T PRK04311 258 GSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEAT 335 (464)
T ss_pred CCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHH
Confidence 6432211 1 1221122233567899888 988865 3677889999888777432222232333444455555
Q ss_pred HHHHhh--hcH------------HHHHHHHHHHHHHHHHHHHHh-CC-Cceee--EEEEe-------eeEEEEeccCCCc
Q 017259 242 LDVIRD--EKL------------AERSAHLGEELRQHLFKIQQQ-FP-NYVKE--VRGRG-------LFNAVEFDKTALP 296 (374)
Q Consensus 242 l~~~~~--~~~------------~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~--~~~~g-------~~~~~~~~~~~~~ 296 (374)
+....+ +.+ .++.+++.+++.+.|+..... +. .++.. .-+.| .-+.+.+... +
T Consensus 336 l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~--~ 413 (464)
T PRK04311 336 LRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK--D 413 (464)
T ss_pred HHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC--C
Confidence 543221 111 255556677777766654210 00 01111 00011 1122233221 1
Q ss_pred hhHHHHHHHHHHC--CeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 297 VSAYDICLKMKER--GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 297 ~~~~~~~~~l~~~--Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+..++.++|++. .|+.+.. .+.+.+-+. +..++|++.++++|++++.
T Consensus 414 ~~~~~l~~~lr~~~~~i~~r~~-~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 414 RSLEALAARLRLLPPPVIGRIE-DGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred CCHHHHHHHHhcCCCCEEEEEE-CCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 2678899999875 4666543 666777643 6688899999999998764
No 336
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=8.1e-16 Score=145.48 Aligned_cols=165 Identities=16% Similarity=0.162 Sum_probs=116.8
Q ss_pred cCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 14 SSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 14 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
.++...+|..+.++++++++.|.+..++++||++|+.+++..+ .++| |+||+.+..|.+...........
T Consensus 62 ~Y~r~~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~l-----l~~G-----d~VI~~~~~y~~t~~~~~~~l~~ 131 (437)
T PRK05613 62 IYSRLTNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNL-----AGAG-----DHIVTSPRLYGGTETLFLVTLNR 131 (437)
T ss_pred eeeCccChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHh-----cCCC-----CEEEECCCccHHHHHHHHHHHHh
Confidence 3445668889999999999998888999999999999888776 5677 99999988876652221111111
Q ss_pred ccccccCCCCCCCceecc-CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 94 NEAIRGFGPLLPGHLKVD-FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.+ ..+.+++ -.|+++++++++ +++++++++.+.|++|.+.+ +++|.++|+++|+++|+|.+++
T Consensus 132 ~G---------i~v~~vd~~~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a 195 (437)
T PRK05613 132 LG---------IEVTFVENPDDPESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIA 195 (437)
T ss_pred cC---------eEEEEECCCCCHHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCc
Confidence 01 2233332 237889998887 57889999998888898998 9999999999999999999986
Q ss_pred CCcccccCcccccCCCCCcEEE--ecccccC-Cccchhhhee
Q 017259 173 GLARSGRMLASDWEEVRPDMVI--LGKALGG-GVIPVSAVLA 211 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s--~sK~~~~-G~~~~G~~~~ 211 (374)
.. .. ........|+++ +.|.++| |- .+|+++.
T Consensus 196 ~g----~~--~~p~~~GaDivv~S~~K~l~G~gd-~~gG~vv 230 (437)
T PRK05613 196 TA----AL--VRPLELGADVVVASLTKFYTGNGS-GLGGVLI 230 (437)
T ss_pred cc----cc--cChHHhCCCEEEeeccceecCCCc-ceeEEEE
Confidence 21 11 111123457664 4598886 44 4455333
No 337
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.9e-15 Score=138.48 Aligned_cols=295 Identities=18% Similarity=0.176 Sum_probs=190.2
Q ss_pred cccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 12 TLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
.+.+++..+|-.+.|++.++++.|.+..+.++||..|+..++..+ .+.| |+|+.....|.+.......+.
T Consensus 54 ~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~l-----l~~G-----D~vl~~~~~YG~t~~~~~~~l 123 (396)
T COG0626 54 GYDYSRTGNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLAL-----LKAG-----DHVLLPDDLYGGTYRLFEKIL 123 (396)
T ss_pred CcccccCCCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHh-----cCCC-----CEEEecCCccchHHHHHHHHH
Confidence 344556679999999999999999999999999999999998888 5667 999999999877655544333
Q ss_pred CCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.+ +..++.+++..+.+.+++++.+ +++++|++|++.||+-.+.+ +++|+++|+++|+++|+|+++
T Consensus 124 ~~---------~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTf 188 (396)
T COG0626 124 QK---------FGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTF 188 (396)
T ss_pred Hh---------cCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCc
Confidence 22 1133444444466667767663 48999999999999999998 999999999999999999998
Q ss_pred cCCcccccCcccccCCCCCcEE--EecccccCCc-cchhhheeC-HHHHhhcCCCCC-CCCCCCCHHHHHHHHHHHHHHh
Q 017259 172 SGLARSGRMLASDWEEVRPDMV--ILGKALGGGV-IPVSAVLAD-KEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~-~~~G~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~ 246 (374)
+.. .....+....|++ |.+|-++|.- +=+|.++++ +++.+.+..... ......+++.+...+..++-+.
T Consensus 189 atP------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~ 262 (396)
T COG0626 189 ATP------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLA 262 (396)
T ss_pred ccc------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHH
Confidence 732 1223333445765 7779998721 023445544 455555421111 1223446666665665555442
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEe
Q 017259 247 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 313 (374)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 313 (374)
- ..++..++...+.+.|++-.. .+|+... ...+.|.++.|++.++. ...+|.+.|.--.+..
T Consensus 263 ~--Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~---~~~~f~~~L~l~~~a~ 337 (396)
T COG0626 263 L--RMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEE---AAKKFLDSLKLFKLAE 337 (396)
T ss_pred H--HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChH---HHHHHHHhCCccEEec
Confidence 2 245556666666666665210 0111000 01137888899887621 4555666554332222
Q ss_pred ----------ccC-----------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 314 ----------KPT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 314 ----------~~~-----------------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.|. .++.+|++.++ |+++.+++-|+++++
T Consensus 338 SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~ 393 (396)
T COG0626 338 SLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALA 393 (396)
T ss_pred cCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHH
Confidence 110 26899999443 566667777777766
No 338
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=2.7e-14 Score=132.54 Aligned_cols=328 Identities=16% Similarity=0.177 Sum_probs=191.3
Q ss_pred HHHHH-HHhccccCc-CCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC
Q 017259 3 ALQEQ-AEKLTLSSR-AFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF 80 (374)
Q Consensus 3 a~~~~-~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y 80 (374)
||+++ +........ +..++-+.+|++.+++++|.+++++++||+.|++.+..+. +++| |.| +.++|
T Consensus 51 aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~-----l~pG-----DeV--psn~~ 118 (450)
T TIGR02618 51 AMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIA-----IKPG-----DYV--PGNMY 118 (450)
T ss_pred HHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhC-----CCCc-----CEE--CCcee
Confidence 55555 555443332 3457779999999999999999999999999988754322 6788 866 44443
Q ss_pred CCcccccccccCCccccccCCC--CCCCceeccC--C-CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHH
Q 017259 81 HGRTLAAISMSCDNEAIRGFGP--LLPGHLKVDF--G-DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAV 154 (374)
Q Consensus 81 hg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~-d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l 154 (374)
...+.......+. .+...... .... ...|+ + |+++++++|+... ++++.+.++.+.|..|+.+.+.+.++++
T Consensus 119 f~Tt~ahIe~~Ga-v~vDi~~dea~~~~-~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I 196 (450)
T TIGR02618 119 FTTTRYHQEKNGA-TFVDIIIDEAHDAQ-LNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREV 196 (450)
T ss_pred HHHHHHHHHhCCe-EEEeeecccccccc-cCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHH
Confidence 2222221222221 11110000 0000 00111 1 8999999998532 3556667766666655555588899999
Q ss_pred HHHHHhcCCEEEEeccccC----Cc------ccccCccc--ccCCCCCcEEEec--ccccCCccchhhhee--CHHHHhh
Q 017259 155 RDLCSKYNILMIADEIQSG----LA------RSGRMLAS--DWEEVRPDMVILG--KALGGGVIPVSAVLA--DKEVMLC 218 (374)
Q Consensus 155 ~~l~~~~~i~li~Dea~~~----~~------~~g~~~~~--~~~~~~~d~~s~s--K~~~~G~~~~G~~~~--~~~~~~~ 218 (374)
.++|++||++||.|.++.- |. +.+....- ....-..|.+++| |..+ . ++|.+++ +++++++
T Consensus 197 ~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~--~-~~GG~l~~~d~~l~~k 273 (450)
T TIGR02618 197 RELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCL--V-NIGGFLCMNDDEMFQS 273 (450)
T ss_pred HHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCC--C-CCceEEEeCCHHHHHH
Confidence 9999999999999999862 11 11111000 0001145665554 3322 2 5555443 6788887
Q ss_pred cCCCC----CCCCCCC-CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc-
Q 017259 219 IQPGE----HGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK- 292 (374)
Q Consensus 219 ~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~- 292 (374)
++... ...+|++ ..-.+.+...+|+...+..+.++.....+++.+.|.+.+ +| ++ .+..|+.++++...
T Consensus 274 ~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~G--vp-v~--~p~ggh~V~vda~~~ 348 (450)
T TIGR02618 274 AKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAAG--VP-IV--EPVGGHAVFLDARRF 348 (450)
T ss_pred HHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCC--Cc-cc--CCCCcceEEEEhHHh
Confidence 76431 1223333 222333444455555455667777777888888887772 22 32 34456777776432
Q ss_pred ---CCC-chhHHHHHHHHH-HCCeEe---ccC------------C--CCEEEEecC-CCCCHHHHHHHHHHHHHHHhccC
Q 017259 293 ---TAL-PVSAYDICLKMK-ERGILA---KPT------------H--DTIVRLTPP-LSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 293 ---~~~-~~~~~~~~~~l~-~~Gi~v---~~~------------~--~~~lRi~~~-~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
-+. .-.+..++..|- +.||-- ... . -..+|+++| ..-|.++++...++|..+.+ ..
T Consensus 349 lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~ 427 (450)
T TIGR02618 349 LPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK-HR 427 (450)
T ss_pred CCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh-hH
Confidence 111 124566666664 445432 110 1 368899776 45689999999999999987 54
Q ss_pred CcCC
Q 017259 350 PKMR 353 (374)
Q Consensus 350 ~~~~ 353 (374)
..+.
T Consensus 428 ~~~~ 431 (450)
T TIGR02618 428 DDIR 431 (450)
T ss_pred hhcC
Confidence 4433
No 339
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.67 E-value=1.6e-14 Score=147.13 Aligned_cols=307 Identities=12% Similarity=0.090 Sum_probs=189.6
Q ss_pred CCcHHHHHHHHhcccCC--C--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 20 NDKFPVFAERLTSMFGY--D--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~--~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
...+++.++.+++++|. + .|+||+|+|+|++.+...+. .++| ++|++..-. |........+....+
T Consensus 77 ~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~----~~~g-----d~Iv~t~~e-H~svl~~~~~a~~~G 146 (805)
T PLN02724 77 SDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFP----WSSE-----SHFCYTLEN-HNSVLGIREYALEKG 146 (805)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCC----CCCC-----CeEEEeecc-ccchHHHHHHHHHcC
Confidence 34577788999998875 2 47999999999998876552 3456 888886555 444443332211111
Q ss_pred ccccCCCCCCCc-----eeccCC-CHHHHHHHHH----h---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-
Q 017259 96 AIRGFGPLLPGH-----LKVDFG-DITALEKIFK----E---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY- 161 (374)
Q Consensus 96 ~~~~~~~~~~~~-----~~~~~~-d~~~le~~l~----~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~- 161 (374)
....+.+..... .....+ +.+++++.++ . .+++++++.+...+|.+|.+.| ++.+..+++..
T Consensus 147 ~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~ 222 (805)
T PLN02724 147 AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQH 222 (805)
T ss_pred CeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcc
Confidence 111111110000 000000 1144555432 1 1246789999999999999998 87665544432
Q ss_pred -------CCEEEEeccccCCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCC-C----
Q 017259 162 -------NILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS-T---- 227 (374)
Q Consensus 162 -------~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~-~---- 227 (374)
++++++|.+|+ .+ . ..++...+.+|++++| |.+++.. ++|+++.++++.+.+.+...+. +
T Consensus 223 ~~~~~~g~~~v~vDaaQ~-~g---~-~piDv~~~~~Dfl~~S~HK~~GgP~-G~G~L~vr~~~~~~l~p~~~GGg~~~~~ 296 (805)
T PLN02724 223 SNFSKSGRWMVLLDAAKG-CG---T-SPPDLSRYPADFVVVSFYKIFGYPT-GLGALLVRRDAAKLLKKKYFGGGTVAAS 296 (805)
T ss_pred cccccCcceEEEeehhhh-cC---C-CCCChhhcCCCEEEEecceeccCCC-CceEEEEehhhhhhhcCCccCCCceEEE
Confidence 36899999997 21 1 1333345678998887 9887666 7899999988777666532211 0
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHh--CCCc-eee----
Q 017259 228 -------------------FGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQ--FPNY-VKE---- 278 (374)
Q Consensus 228 -------------------~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~--~~~~-~~~---- 278 (374)
.+.+..+.+++.++++.+.. +.+.++.+.+.+++.+.|+++... .|.+ +..
T Consensus 297 ~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~ 376 (805)
T PLN02724 297 IADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTF 376 (805)
T ss_pred ecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCC
Confidence 13466666777777777655 356778888888888888776410 0011 111
Q ss_pred ---EEEEeeeEEEEeccCCCc-hhHHHHHHHHHHCCeEeccCC-------------------------------------
Q 017259 279 ---VRGRGLFNAVEFDKTALP-VSAYDICLKMKERGILAKPTH------------------------------------- 317 (374)
Q Consensus 279 ---~~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~~------------------------------------- 317 (374)
...++.++.|.+...... ....++...+.++||.++.+.
T Consensus 377 ~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~ 456 (805)
T PLN02724 377 KLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHG 456 (805)
T ss_pred CCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecC
Confidence 123567777777543211 123445544456788886431
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+++|+|+++.+|.+|++++++.|++.+.
T Consensus 457 ~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 457 RPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 17899999999999999999999999886
No 340
>PLN02880 tyrosine decarboxylase
Probab=99.67 E-value=5.3e-15 Score=142.10 Aligned_cols=307 Identities=14% Similarity=0.062 Sum_probs=180.1
Q ss_pred HHHHHHHhcccCCCe---------EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCc
Q 017259 24 PVFAERLTSMFGYDM---------VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDN 94 (374)
Q Consensus 24 ~~l~~~l~~~~~~~~---------~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~ 94 (374)
.++.++|++.+|.++ -++++|||+|+..|+.++|.......|......-++..+..-|.....+..+.+-+
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg 204 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIH 204 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCC
Confidence 345666666666553 58899999999999999986542222311111223333333366666555555432
Q ss_pred cccccCCCCCCCceeccCC-------CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 017259 95 EAIRGFGPLLPGHLKVDFG-------DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNIL 164 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~ 164 (374)
.- .+..+|.+ |+++|+++|++ .+..+.+|+.+-...++|.+.| +++|.++|++||++
T Consensus 205 ~~---------~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iw 271 (490)
T PLN02880 205 PE---------NCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMW 271 (490)
T ss_pred HH---------HEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCE
Confidence 10 11122221 78999999974 2334666666666777898998 99999999999999
Q ss_pred EEEeccccCCcccccCcccccCCC-CCcEEEec--ccccCCccchhhheeCH--HHHhhcCCCC----C-----CCCC--
Q 017259 165 MIADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLADK--EVMLCIQPGE----H-----GSTF-- 228 (374)
Q Consensus 165 li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~~--~~~~~~~~~~----~-----~~~~-- 228 (374)
+++|.+|+|+...-..+.....++ .+|.++++ |.+..++ +.|.++.++ .+...+.... . ..++
T Consensus 272 lHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~-~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~ 350 (490)
T PLN02880 272 FHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNF-DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDY 350 (490)
T ss_pred EEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCc-cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCCh
Confidence 999999986422111111112233 46766665 9988777 778877653 2222222110 0 0000
Q ss_pred ------CCCHHHHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCc---
Q 017259 229 ------GGNPLASAVAIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--- 296 (374)
Q Consensus 229 ------~~~~~~~~aa~~al~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 296 (374)
.+..+.....+..++.+..+++.++++ ++.+++.+.+++. |++..-.++...++.|.++.....
T Consensus 351 ~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~----~~~el~~~~~~~iv~Fr~~~~~~~~~~ 426 (490)
T PLN02880 351 KDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD----SRFEVVTPRIFSLVCFRLVPPKNNEDN 426 (490)
T ss_pred hccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEecCCceEEEEEEEeCCCCChhh
Confidence 112222344555677766677777766 6666666655443 222222233455666666432110
Q ss_pred --hhHHHHHHHHHHCC-eEeccC---CCCEEEEecCCCC-CHHHHHHHHHHHHHHHhccC
Q 017259 297 --VSAYDICLKMKERG-ILAKPT---HDTIVRLTPPLSI-SSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 297 --~~~~~~~~~l~~~G-i~v~~~---~~~~lRi~~~~~~-~~e~i~~~~~~l~~~~~~~~ 349 (374)
....++.++|.+.| +++... +..++|+++.... +++|++.+++.|.++.+ ++
T Consensus 427 ~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~-~~ 485 (490)
T PLN02880 427 GNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEAS-KL 485 (490)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HH
Confidence 01235666666665 444432 4679999876555 46999999999988877 54
No 341
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.66 E-value=7.3e-14 Score=130.03 Aligned_cols=312 Identities=14% Similarity=0.113 Sum_probs=182.1
Q ss_pred CCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc-ccccCCccc
Q 017259 18 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA-ISMSCDNEA 96 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~ 96 (374)
..++-+.+|++.+++++|.+++++++||+.|++++..+. +++| |.| .+.+|-.+..+ +...+. .+
T Consensus 75 agd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~-----v~pG-----d~V---p~n~~f~Tt~ahI~~~Ga-~f 140 (460)
T PRK13237 75 AGSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIA-----IKPG-----QYV---PGNMYFTTTRYHQELNGG-IF 140 (460)
T ss_pred cCCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhC-----CCCc-----CEE---CCccchHhhHHHHHhCCc-EE
Confidence 447789999999999999999999999999999864332 6677 754 33333333222 222221 11
Q ss_pred ccc-----CCCCCCCceeccCC-CHHHHHHHHHhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 97 IRG-----FGPLLPGHLKVDFG-DITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 97 ~~~-----~~~~~~~~~~~~~~-d~~~le~~l~~~-~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
... +.+.. ......+ |+++++++|+.+ .++++.+.++.+.|..|+.+.+.+.+++|.++|++||++||.|.
T Consensus 141 vDi~~d~a~~~~~--~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 141 VDIIIDEAHDAQS--DHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred Eeeeccccccccc--CCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 100 00000 0111122 899999999854 24455555555555555455577889999999999999999999
Q ss_pred ccc-C---Cc------ccccCcc--cccCCCCCcEEEec--ccccCCccchhhhee-CHHHHhhcCCCC----CCCCCCC
Q 017259 170 IQS-G---LA------RSGRMLA--SDWEEVRPDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGE----HGSTFGG 230 (374)
Q Consensus 170 a~~-~---~~------~~g~~~~--~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~-~~~~~~~~~~~~----~~~~~~~ 230 (374)
++. + |. +.+.... .....-..|.++|| |.++.+. .|+++. ++++.++++... ...+|.+
T Consensus 219 Ara~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~tygg 296 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMPSYGG 296 (460)
T ss_pred cchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCcCCCC
Confidence 987 3 11 1111100 00011245766555 6655322 234554 567888776541 2235544
Q ss_pred C-HHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEecc----CCC-chhHHHHHH
Q 017259 231 N-PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TAL-PVSAYDICL 304 (374)
Q Consensus 231 ~-~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~-~~~~~~~~~ 304 (374)
- .=-+.|....++...+.++.++.-...+++.+.|.+.+ ++...+..|+-++++... -+. .-.+..++.
T Consensus 297 ~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~G-----vpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~ 371 (460)
T PRK13237 297 MAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAAG-----VPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAA 371 (460)
T ss_pred hhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHCC-----CceecCCCceEEEEEhHHhCCCCCcccChHHHHHH
Confidence 2 21233333344444455677777778888888887653 322234455666665322 111 124666776
Q ss_pred HHH-HCCeEec---c-------C-------CCCEEEEecC-CCCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 305 KMK-ERGILAK---P-------T-------HDTIVRLTPP-LSISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 305 ~l~-~~Gi~v~---~-------~-------~~~~lRi~~~-~~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
.|- +.||--. . . .-..+|+++| ..-|.++++...++|..+.+ ....+.
T Consensus 372 ~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~ 438 (460)
T PRK13237 372 ELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK-HREDIR 438 (460)
T ss_pred HHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH-hHhhcC
Confidence 664 4455331 1 0 0368899776 45689999999999999887 544433
No 342
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.65 E-value=1.3e-13 Score=130.66 Aligned_cols=286 Identities=19% Similarity=0.186 Sum_probs=171.1
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC---CCcccccccccCCccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF---HGRTLAAISMSCDNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y---hg~~~~~~~~~~~~~~ 96 (374)
...++.+++.+++++|.+..++++|++.|+..++..+ .+| ++||+.+..+ .+.......+. ..+
T Consensus 121 g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l------~~G-----deVIvs~~e~v~~ggs~~i~~~~~-~~G- 187 (454)
T TIGR00474 121 GSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTL------AKG-----KEVIVSRGELVEIGGSFRIPDVME-QSG- 187 (454)
T ss_pred chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh------CCc-----CEEEECCChhhhhcchhhHHHHHH-HcC-
Confidence 3456889999999999998999999999998888543 456 8999988763 22211111111 001
Q ss_pred cccCCCCCCCceeccC---CCHHHHHHHHHhcCCcEEEEEEccccCCC--C--cccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 97 IRGFGPLLPGHLKVDF---GDITALEKIFKESGDQIAGFLFEPIQGEA--G--VIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~~~vi~~~~~~~~--g--~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..+..+.. .++++++++++ ++|+++++++..|.+ | ...+ +++|+++|++||+++++|.
T Consensus 188 --------~~~~~v~~~~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~ 252 (454)
T TIGR00474 188 --------AKLVEVGTTNRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDL 252 (454)
T ss_pred --------CEEEEeCCCCCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEEC
Confidence 11222222 36888998887 679998888876653 4 4677 9999999999999999997
Q ss_pred cccCCccc------ccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHH
Q 017259 170 IQSGLARS------GRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 241 (374)
Q Consensus 170 a~~~~~~~------g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 241 (374)
+.+-++.. ..+..........|++++| |.++|.. .|++++++++++.++.......+...-+.+++..+.
T Consensus 253 ~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~--~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~ 330 (454)
T TIGR00474 253 GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ--AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEAT 330 (454)
T ss_pred CCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe--EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHH
Confidence 63322111 1121222334567899888 9987653 677889988887766432222222233333444444
Q ss_pred HHHHhhh--cH------------HHHHHHHHHHHHHHHHHHHHhCCCceeeE---E---EEe-------eeEEEEeccCC
Q 017259 242 LDVIRDE--KL------------AERSAHLGEELRQHLFKIQQQFPNYVKEV---R---GRG-------LFNAVEFDKTA 294 (374)
Q Consensus 242 l~~~~~~--~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~---~~g-------~~~~~~~~~~~ 294 (374)
+....+. .+ .++.+++..++.+.|+.... +++.... . +.| .-+.+.+...
T Consensus 331 l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~--~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~- 407 (454)
T TIGR00474 331 LRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG--PGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPD- 407 (454)
T ss_pred HHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc--CCceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-
Confidence 4332211 11 23566677777777766421 1111111 1 011 1122223211
Q ss_pred CchhHHHHHHHHHHCC--eEeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 295 LPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 295 ~~~~~~~~~~~l~~~G--i~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
+.+..++.++|++.. |+.+. ..+.+.+-+. +..++|++.++++|
T Consensus 408 -~~~~~~l~~~lr~~~~~ii~r~-~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 408 -GLSAEKLEARLRELPPPIIGRI-EDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred -CCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 126788999988764 66653 3666777643 56778888888765
No 343
>PLN02590 probable tyrosine decarboxylase
Probab=99.64 E-value=1.2e-13 Score=133.00 Aligned_cols=309 Identities=12% Similarity=0.071 Sum_probs=178.3
Q ss_pred HHHHHHhcccCCCe---------EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 25 VFAERLTSMFGYDM---------VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 25 ~l~~~l~~~~~~~~---------~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++.++|++.+|.+. -++++|||+|+..|+.++|.......|.....+-++..+-.-|.....+..+.+-+.
T Consensus 174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~ 253 (539)
T PLN02590 174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE 253 (539)
T ss_pred HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence 35556666666543 578999999999999999875422222110112233333333555555544443211
Q ss_pred ccccCCCCCCCceeccCC-------CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEE
Q 017259 96 AIRGFGPLLPGHLKVDFG-------DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM 165 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~l 165 (374)
..+..++.+ |+++|+++|++ .+..+-+|+.+-...++|.+-| +++|.++|++||+++
T Consensus 254 ---------~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~~g~Wl 320 (539)
T PLN02590 254 ---------ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKKYGIWL 320 (539)
T ss_pred ---------ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCeE
Confidence 112222221 79999999974 2234556666666667898888 999999999999999
Q ss_pred EEeccccCCcccccCcccccCCC-CCcEEEec--ccccCCccchhhheeCHH--HHhhcCCC------C-----------
Q 017259 166 IADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG------E----------- 223 (374)
Q Consensus 166 i~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~~~--~~~~~~~~------~----------- 223 (374)
++|.+|+|+...-..+.....++ ..|-+++. |.+...+ ..|.++.++. +.+.+... .
T Consensus 321 HVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~-~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~ 399 (539)
T PLN02590 321 HVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQ-TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYK 399 (539)
T ss_pred EEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCc-CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCcc
Confidence 99999997532211111111232 34555555 8888777 7777766542 22222110 0
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHhhhcHHHHHH---HHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC-c--
Q 017259 224 -HGSTFGGNPLASAVAIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-P-- 296 (374)
Q Consensus 224 -~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~-- 296 (374)
.... ..-.+.....+.+++.+..+++.+.++ ++.+++.+.+++. |.+..-.++.-.++.|.+..... .
T Consensus 400 d~~i~-lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~----~~fel~~~~~l~iVcFr~~~~~~~~~~ 474 (539)
T PLN02590 400 DWQIS-LSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD----PSFEVVTTRYFSLVCFRLAPVDGDEDQ 474 (539)
T ss_pred ccCCC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceEEEEEEecCCCCCHHH
Confidence 0011 112345566777777776665554444 4555555544432 22222233344555555532110 0
Q ss_pred --hhHHHHHHHHHHCC-eEeccC---CCCEEEEecC-CCCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 297 --VSAYDICLKMKERG-ILAKPT---HDTIVRLTPP-LSISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 297 --~~~~~~~~~l~~~G-i~v~~~---~~~~lRi~~~-~~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
....++.+.+.+.| +++++. +..+||+++. ...++++++.+++.|.+..+ ++.++.
T Consensus 475 ~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~-~~~~~~ 537 (539)
T PLN02590 475 CNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS-KFTRND 537 (539)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HhcccC
Confidence 12345667777677 444443 3578999763 45578999999999999888 776654
No 344
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=2.7e-14 Score=129.42 Aligned_cols=199 Identities=16% Similarity=0.144 Sum_probs=145.1
Q ss_pred ccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 13 LSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 13 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
+.+++..+|....+++.+++..|..+++.++||..|+..++..+ .+.| ++|+.....|.|..........
T Consensus 69 ~~Ysr~~nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L-----~~~g-----~~iV~~~~~Y~gT~~~l~~~~~ 138 (409)
T KOG0053|consen 69 YDYSRSGNPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHL-----LPAG-----DHIVATGDVYGGTLRILRKFLP 138 (409)
T ss_pred cccccCCCCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHh-----cCCC-----CcEEEeCCCcccHHHHHHHHHH
Confidence 45556779999999999999999999999999999999999988 5666 9999999999775444332221
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.. .....++..+++++++++++ +++++|++|++.||...+.+ +++|+++|+++|+++++|++++
T Consensus 139 ~~---------gie~~~vd~~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~ 202 (409)
T KOG0053|consen 139 KF---------GGEGDFVDVDDLKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFG 202 (409)
T ss_pred Hh---------CceeeeechhhHHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcC
Confidence 11 12234444446667777776 58999999999999999998 9999999999999999999987
Q ss_pred CCcccccCcccccCCCCCcEE--EecccccCC-ccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Q 017259 173 GLARSGRMLASDWEEVRPDMV--ILGKALGGG-VIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLD 243 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G-~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~ 243 (374)
+. ...+.+....|++ |.+|-++|. =+=+|.++.+ .++...++.......+..+++.+.-....++
T Consensus 203 ~p------~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 203 SP------YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred cc------cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 43 2333444556776 677999972 2133456665 6777777654444455667777665555444
No 345
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.63 E-value=6.6e-14 Score=124.66 Aligned_cols=307 Identities=14% Similarity=0.123 Sum_probs=167.3
Q ss_pred CCCCcHHHHHHHHhcccCC--CeEEecCChHHHHHH-HHHHHHHcccc---cccCCCCccEEEEeccCCCCccccccccc
Q 017259 18 FYNDKFPVFAERLTSMFGY--DMVLPMNTGAEGVET-ALKLARKWGYV---KKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~-al~~~~~~~~~---~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
+..+..-++.+-+++++|. ++++...|.|--+.. ++..+...+.. .+....+.-+.+++.|+|-.+......++
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 4466677888888888754 578777777654433 22222222211 12223345789999999955544443332
Q ss_pred CCccccccCCCCCCCceeccCC----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH-HHhcCCEEE
Q 017259 92 CDNEAIRGFGPLLPGHLKVDFG----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMI 166 (374)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l-~~~~~i~li 166 (374)
..+..+|.+ |++.+|+.+.+ .+.+|++++.|.++|+.++..|.+..++|+.+ ....|..|+
T Consensus 146 -------------iemi~VpM~~dGPDmD~Ve~LV~~-D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 146 -------------IEMIPVPMTEDGPDMDMVEELVAE-DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp --------------EEEEEEEETTEE-HHHHHHHTHT-STTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred -------------cEEEecCCCCCCCCHHHHHHHHhc-CCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 223333332 89999987754 36899999999655544455599999999999 557999999
Q ss_pred EeccccC--CcccccCcc---c---ccCCCCCc----EEEecccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHH
Q 017259 167 ADEIQSG--LARSGRMLA---S---DWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLA 234 (374)
Q Consensus 167 ~Dea~~~--~~~~g~~~~---~---~~~~~~~d----~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (374)
+|++|+- +........ + ....-+|| +.|.||-..+|. +++++.++++-++.+.......+.+.+-+.
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~Ga-Gva~~aaS~~Nl~~~~~~~~~~tIgpdKvN 290 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGA-GVAFFAASEANLAWIKKHLSVQTIGPDKVN 290 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTS-S-EEEEE-HHHHHHHHHHHHHH-S---HHH
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCc-ceeeeecCHHHHHHHHHHhcCceeCccHHH
Confidence 9999982 311111100 1 01112455 348899777777 889999998877777655445566667777
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHH-------HHHHHHHHHHHH-hCCCceeeEEEE-eeeEEEEeccCCCchhHHHHHHH
Q 017259 235 SAVAIASLDVIRDEKLAERSAHLG-------EELRQHLFKIQQ-QFPNYVKEVRGR-GLFNAVEFDKTALPVSAYDICLK 305 (374)
Q Consensus 235 ~~aa~~al~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 305 (374)
|..-..-++..+ .++.+++++.+ +...+.|++-.. .. ++..++.+. |.|++++..+. .+..+++.
T Consensus 291 QLRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~G----~AkrvV~l 364 (425)
T PF12897_consen 291 QLRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLDG----TAKRVVEL 364 (425)
T ss_dssp HHHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEESTT-----HHHHHHH
T ss_pred HHHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCCC----hHHHHHHH
Confidence 665554444321 14555555543 444444444433 32 456666655 56667777665 79999999
Q ss_pred HHHCCeEeccCC----------CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 306 MKERGILAKPTH----------DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 306 l~~~Gi~v~~~~----------~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.+.||.+++.+ ...|||+|++. +.+|++.+++.+..+.+
T Consensus 365 akeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P-~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 365 AKEAGVALTPAGATFPYGKDPRDSNIRIAPSYP-SLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHTTEE---TTTTSGGG--TTS-EEEE--SSS--HHHHHHHHHHHHHHHH
T ss_pred HHHhCceeCCCCCCCCCCCCCCCCcEEecCCCC-CHHHHHHHHHHHHHHHH
Confidence 999999998842 57999998865 78899999999876665
No 346
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.61 E-value=1.9e-14 Score=133.84 Aligned_cols=281 Identities=11% Similarity=0.022 Sum_probs=171.0
Q ss_pred CcHHHHHHHHhcccCC---CeEEecCC-hHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC-CCcccccccccCCcc
Q 017259 21 DKFPVFAERLTSMFGY---DMVLPMNT-GAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF-HGRTLAAISMSCDNE 95 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~---~~~~~~~~-gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y-hg~~~~~~~~~~~~~ 95 (374)
..+++.++.++++++. ++++|++| +|++++.++..+... .++| ++|++ +.| |.....+...+
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~--~~~~-----~~i~~--g~~~~~~~~~a~~~g---- 110 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD--KGTA-----DYVVT--GAWSAKAAKEAKRYG---- 110 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC--CCeE-----EEEEC--CHHHHHHHHHHHhcC----
Confidence 5577889999998874 36888877 999999999888311 1233 55543 222 11100111111
Q ss_pred ccccCCCCCCCceeccC------CC-HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 96 AIRGFGPLLPGHLKVDF------GD-ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~------~d-~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
..+..++. .+ .+..+..++ +++++|.+.+..+.+|...+ ++++.||+++++|
T Consensus 111 ---------~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~~---------~i~~~~g~~~~VD 169 (355)
T cd00611 111 ---------GVVVIVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEFD---------EVPDTGGVPLVAD 169 (355)
T ss_pred ---------CCcEEEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEcc---------eecccCCCeEEEE
Confidence 11111111 12 222222232 57889999898888887632 4556699999999
Q ss_pred ccccCCcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCCC-----------CCC-CCCCCHHHHH
Q 017259 169 EIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------HGS-TFGGNPLASA 236 (374)
Q Consensus 169 ea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~ 236 (374)
.+++ ++ +.++..+.++ .++.+--|.+| .. ++|+++.++++.+++.+.. ... .+.++..+..
T Consensus 170 a~qs-~g--~~~idv~~~~--~~~ss~~K~lG-P~-G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~ 242 (355)
T cd00611 170 MSSN-IL--SRPIDVSKFG--VIYAGAQKNLG-PA-GVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIY 242 (355)
T ss_pred cccc-cc--CCCCCHHHhC--EEEeecccccC-CC-ceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHH
Confidence 9998 21 1222333222 23323448775 44 6788999998887665421 011 2355777888
Q ss_pred HHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeE
Q 017259 237 VAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 312 (374)
Q Consensus 237 aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 312 (374)
+..++++++.+. ++.++.+++.+++++.|+++...+..........+..+.|.++... ...++.+.+.+.|+.
T Consensus 243 ~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~---l~~~~~~~~~r~G~~ 319 (355)
T cd00611 243 MMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE---LEKEFLKEAEAAGMI 319 (355)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChh---hhHHHHHHHHHCCCc
Confidence 888899987654 4556666777777777776521110111101122344666665421 235666788899998
Q ss_pred eccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 313 AKPTH--DTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 313 v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+.+++ .+.+|+++...+|.+|+++++++|+++-
T Consensus 320 ~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 320 GLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred ccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 66654 4789999999999999999999998753
No 347
>PRK15029 arginine decarboxylase; Provisional
Probab=99.61 E-value=4.7e-13 Score=132.60 Aligned_cols=307 Identities=15% Similarity=0.100 Sum_probs=181.6
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChHHH-HHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Ccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGAEG-VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEAI 97 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs~a-~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~~ 97 (374)
.....+.++..++.+|.++.+|..|||++ +.+++.++ +.+| |+|++.+++ |-+...+..+++ .|.|.
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~-----~~~g-----d~Vlv~RN~-HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQAC-----MTDN-----DVVVVDRNC-HKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHh-----cCCC-----CEEEeeccc-HHHHHHHHHHcCCeEEEe
Confidence 44455677777778899987665555554 55444544 6778 999999999 666555655554 45544
Q ss_pred ccCCCCCCCceeccCC----CHHHHHHHHHhcCCcE--------EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEE
Q 017259 98 RGFGPLLPGHLKVDFG----DITALEKIFKESGDQI--------AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM 165 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~--------~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~l 165 (374)
..... .-....+.+ +++.++++|++++... ++++++|.+ .|.+.+ +++|+++|++++++|
T Consensus 273 ~P~~~--~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~l 344 (755)
T PRK15029 273 VPSRN--RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRL 344 (755)
T ss_pred ccccc--ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeE
Confidence 32111 001111111 4889999998775433 455555544 377777 999999999999999
Q ss_pred EEeccccCCcccccCccc-ccC-----C-CCCc-EEEec--ccccCCccchhhheeCHH--HH--hhcCCC-CCCCCCCC
Q 017259 166 IADEIQSGLARSGRMLAS-DWE-----E-VRPD-MVILG--KALGGGVIPVSAVLADKE--VM--LCIQPG-EHGSTFGG 230 (374)
Q Consensus 166 i~Dea~~~~~~~g~~~~~-~~~-----~-~~~d-~~s~s--K~~~~G~~~~G~~~~~~~--~~--~~~~~~-~~~~~~~~ 230 (374)
++||||+++......+.. ... . ..+| +++-| |.+++ +...+++..+.. .+ +++... ...+|-++
T Consensus 345 lvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSP 423 (755)
T PRK15029 345 HFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYMMHATTSP 423 (755)
T ss_pred EEECccccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHHHHcCCCc
Confidence 999999863222222221 111 1 3467 77777 76653 212233444222 11 122211 13345577
Q ss_pred CHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhC----CCce---------------------------
Q 017259 231 NPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF----PNYV--------------------------- 276 (374)
Q Consensus 231 ~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~--------------------------- 276 (374)
+-+.++..-.+.+.+.. +...++..+....+++.+.++...+ .+++
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 503 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLL 503 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhh
Confidence 77777777666666653 2455666667777777776553210 0000
Q ss_pred -----eeEE-------E-----------EeeeEEEEeccC-CC------chhHHHHHHHHHHCCeEeccCCCCEEEEecC
Q 017259 277 -----KEVR-------G-----------RGLFNAVEFDKT-AL------PVSAYDICLKMKERGILAKPTHDTIVRLTPP 326 (374)
Q Consensus 277 -----~~~~-------~-----------~g~~~~~~~~~~-~~------~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~ 326 (374)
...- + ...-+.+..+.. .. |..+.++.+.|.++||.+.-.+...+-+.++
T Consensus 504 ~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~~~vL~l~s 583 (755)
T PRK15029 504 TTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFS 583 (755)
T ss_pred ccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecCCCeEEEEeC
Confidence 0000 0 011112222111 10 1234489999988899999988888888778
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
...+++++++++++|.++-+
T Consensus 584 ~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 584 MGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 88999999999999987754
No 348
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.60 E-value=3.5e-14 Score=131.35 Aligned_cols=292 Identities=17% Similarity=0.176 Sum_probs=165.0
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChH-HHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Cccc
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGA-EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEA 96 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs-~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~ 96 (374)
+.....+.++.+++.+|.++.+|..+|| .++.+++.++ +.+| |+|++.+.+ |-+...+..+++ .|.|
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~-----~~~g-----d~VLv~RN~-HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMAL-----CRPG-----DKVLVDRNC-HKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHH-----TTTT-----CEEEEETT---HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHh-----cCCC-----CEEEEcCCc-HHHHHHHHHHcCCeEEE
Confidence 3445677888888899999886665555 4555555555 6778 999999999 565555555544 4444
Q ss_pred cccCCCCCCCc-eeccCC--CHHHHHHHHHhcCCcEE---EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 97 IRGFGPLLPGH-LKVDFG--DITALEKIFKESGDQIA---GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 97 ~~~~~~~~~~~-~~~~~~--d~~~le~~l~~~~~~~~---~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
....... .++ ..++.. +.+.++++|+++++..+ +++++|.+ .|.+.+ +++|.++|++++++|++|||
T Consensus 133 i~p~~~~-~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 133 IPPEDNE-YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp EEEEE-T-TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-T
T ss_pred ecCCccc-cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEcc
Confidence 4322110 111 111110 34899999999876555 66666644 488888 99999999999999999999
Q ss_pred ccCC-cccccCcccccCCCCCc-------EEEec--ccccCCccchhhheeCHHH---HhhcCCC-CCCCCCCCCHHHHH
Q 017259 171 QSGL-ARSGRMLASDWEEVRPD-------MVILG--KALGGGVIPVSAVLADKEV---MLCIQPG-EHGSTFGGNPLASA 236 (374)
Q Consensus 171 ~~~~-~~~g~~~~~~~~~~~~d-------~~s~s--K~~~~G~~~~G~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~ 236 (374)
|++. ... .+.........| +++-| |.+++ +...+++..+... .+++... ...+|-+++-+.++
T Consensus 206 hGah~~F~--~lp~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmA 282 (417)
T PF01276_consen 206 HGAHFGFH--PLPRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMA 282 (417)
T ss_dssp T-TTGGCS--GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHH
T ss_pred ccccccCC--CCccchhhccCccccccceeeeechhhcccc-cccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHH
Confidence 9863 222 223334445566 77777 76653 2133344443321 1222211 13446677888888
Q ss_pred HHHHHHHHH-hhh--cHHHHHHHHHHHHHHHHHHHHHhCCCcee----eEEE-------------------------Eee
Q 017259 237 VAIASLDVI-RDE--KLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRG-------------------------RGL 284 (374)
Q Consensus 237 aa~~al~~~-~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~-------------------------~g~ 284 (374)
..-.+.+++ ..+ .+.++..+..+.++++++... .+..+.. .... .+.
T Consensus 283 SlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~ 361 (417)
T PF01276_consen 283 SLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLN-DIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPT 361 (417)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TT
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcC-CCceEecCCccccCCccccccCccccchhchhcccCccccCCc
Confidence 777777777 332 567777788888888886532 1111110 0111 111
Q ss_pred eEEEEecc-------CCCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHH
Q 017259 285 FNAVEFDK-------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN 332 (374)
Q Consensus 285 ~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e 332 (374)
-+.+..+. ...|.++..+.++|.++||.+.-.+...+-+-++...|++
T Consensus 362 K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 362 KLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp EEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred EEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 22222211 1125678899999999999998877777766655555543
No 349
>PLN02263 serine decarboxylase
Probab=99.60 E-value=2e-12 Score=121.50 Aligned_cols=276 Identities=15% Similarity=0.054 Sum_probs=172.9
Q ss_pred HHHHHHhcccCCC----eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 25 VFAERLTSMFGYD----MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 25 ~l~~~l~~~~~~~----~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
++-++++++++.+ .-++|+|||+++..|+.++|.+. + +-+++.+-.-|.....+..+.+-.
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~---~------~~vvy~S~~aH~Sv~KAa~llgi~------ 201 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF---P------DGILYASRESHYSVFKAARMYRME------ 201 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc---C------CcEEEEcCCccHHHHHHHHhcCCc------
Confidence 3555666666653 36889999999999999998642 1 223444444466655555554432
Q ss_pred CCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC-----EEEEecc
Q 017259 101 GPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-----LMIADEI 170 (374)
Q Consensus 101 ~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i-----~li~Dea 170 (374)
+..+|.+ |+++|+++|.+...++.+|+.+-...++|.+-| +++|.++|++||+ ++++|.+
T Consensus 202 ------~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA 271 (470)
T PLN02263 202 ------CVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGA 271 (470)
T ss_pred ------ceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEecc
Confidence 2223322 899999999865445666666666677898888 9999999999997 9999999
Q ss_pred ccCCcc----cccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCC-----CCCCCCC--CHHHHHH
Q 017259 171 QSGLAR----SGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGG--NPLASAV 237 (374)
Q Consensus 171 ~~~~~~----~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~a 237 (374)
++|+.. ....+.+ ....|-++++ |.++..+ +.|.++.+++....+.... ...+..+ +......
T Consensus 272 ~GG~~lPf~~~~~~~df---~~~vDSIsvD~HK~l~~P~-~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~ 347 (470)
T PLN02263 272 LFGLMMPFVKRAPKVTF---KKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 347 (470)
T ss_pred chhhHhhhcccccccCC---CcCccEEEECCccccCCCc-CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHH
Confidence 997522 1111111 1124555555 8888777 8888888876554443210 1112222 3234566
Q ss_pred HHHHHHHHhhhcHHHHHH---HHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec
Q 017259 238 AIASLDVIRDEKLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 314 (374)
Q Consensus 238 a~~al~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 314 (374)
++.+++.+..+++.+.++ ++.+++.+++++. ++.....+..+.+.|..+. ++ +..+|..+.
T Consensus 348 lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-----g~~~~~~p~s~~V~f~~p~-------~~----~~~~gW~L~ 411 (470)
T PLN02263 348 LWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-----GISAMLNELSSTVVFERPK-------DE----EFVRRWQLA 411 (470)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEeCCCceEEEEecCc-------hH----HhhcceEEc
Confidence 778888777665554444 4556666666554 2322233444555543332 11 134677777
Q ss_pred cCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 PTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 ~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.. ++.+++......+.+.++++++.|++..+
T Consensus 412 ~~-~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 412 CQ-GNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cC-CCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 65 45688887776788999999999988877
No 350
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.59 E-value=2.7e-14 Score=118.34 Aligned_cols=157 Identities=24% Similarity=0.328 Sum_probs=111.3
Q ss_pred HHHHHHHHhccc--CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccc-ccccccCCcccccc
Q 017259 23 FPVFAERLTSMF--GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTL-AAISMSCDNEAIRG 99 (374)
Q Consensus 23 ~~~l~~~l~~~~--~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~-~~~~~~~~~~~~~~ 99 (374)
++++++++++++ +.+++++++|+++|+..+++.+. ++| ++|++.++.|++... .......
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-----~~~-----~~v~~~~~~~~~~~~~~~~~~g~------- 64 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL-----GPG-----DEVIVDANGHGSRYWVAAELAGA------- 64 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC-----CCC-----CEEEEeecccceehhhHHHhcCC-------
Confidence 467899999999 88899999999999999999883 345 899999999988763 2221111
Q ss_pred CCCCCCCceeccCC-------CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 100 FGPLLPGHLKVDFG-------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 100 ~~~~~~~~~~~~~~-------d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.+..++.+ +.+.+++.. ..+++++++++++++++|...+ +++|.++|+++|+++|+|++|+
T Consensus 65 ------~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~ 132 (170)
T cd01494 65 ------KPVPVPVDDAGYGGLDVAILEELK--AKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASA 132 (170)
T ss_pred ------EEEEeccCCCCccchhhhhhhhcc--ccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccc
Confidence 11111111 122343322 2368999999999999998887 7999999999999999999999
Q ss_pred CCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeC
Q 017259 173 GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD 212 (374)
Q Consensus 173 ~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~ 212 (374)
++...... .......+|+++.| |.+++ . ++|+++.+
T Consensus 133 ~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~-~-~~G~l~~~ 170 (170)
T cd01494 133 GGASPAPG--VLIPEGGADVVTFSLHKNLGG-E-GGGVVIVK 170 (170)
T ss_pred cccccccc--cccccccCCEEEEEcccccCC-C-ceEEEEeC
Confidence 65433211 12223457777555 99987 5 77887653
No 351
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.59 E-value=2.2e-12 Score=109.04 Aligned_cols=295 Identities=18% Similarity=0.192 Sum_probs=184.4
Q ss_pred CCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccc
Q 017259 19 YNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 19 ~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 98 (374)
..|+..++-+.|++++|.+.+-+|+|+-+|-.++|..+ .++| |-|++.... |-.+..+.-..+......
T Consensus 59 ~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal-----~~~g-----d~vV~D~~a-HYttyvAAEragl~v~eV 127 (382)
T COG1103 59 TKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHAL-----CKEG-----DWVVVDSLA-HYTTYVAAERAGLNVAEV 127 (382)
T ss_pred cCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHh-----ccCC-----CEEEEcCcc-hHHHHHHHHhcCCeEEec
Confidence 45677788888999999999999999999999999888 6677 888777665 333333222222111110
Q ss_pred cCCCCCCCceeccCCCHHHH----HHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 99 GFGPLLPGHLKVDFGDITAL----EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~l----e~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
+-.. .+.... +++.. ++..++.++.+++.++..+.++.|++.+ -++++++|+++|++++...+|+ .
T Consensus 128 p~tg-~Pey~i----~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~ 197 (382)
T COG1103 128 PNTG-YPEYKI----TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-V 197 (382)
T ss_pred CCCC-CCceEe----cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-e
Confidence 0000 010111 45544 4444444466889999999999999998 9999999999999999999998 3
Q ss_pred cccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCC-----------CC-CCCCCCHHHHHHHHH
Q 017259 175 ARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----------HG-STFGGNPLASAVAIA 240 (374)
Q Consensus 175 ~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~aa~~ 240 (374)
| .. ..+...+.+|++.-| |++++.- |+|.+..++++.+..-... .+ +..+.+.+.+.|
T Consensus 198 G---rm-pvs~ke~g~DFiVgSGHKsmAAs~-PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmA--- 269 (382)
T COG1103 198 G---RM-PVSGKEIGADFIVGSGHKSMAASA-PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMA--- 269 (382)
T ss_pred c---cc-cccccccCCCEEEecCccchhccC-CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHh---
Confidence 2 21 334456778888666 8998776 8999999988776643211 11 112333333333
Q ss_pred HHHHHhhh--cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCC-----CchhHHHHHHHHHHCCeE-
Q 017259 241 SLDVIRDE--KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGIL- 312 (374)
Q Consensus 241 al~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gi~- 312 (374)
++-...+. .|-+.+ +..+++.+.|+.+.... ....-+.+--++.|+.|... .....--+++.|.++||.
T Consensus 270 SfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~--qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~G 346 (382)
T COG1103 270 SFPHVVERVKRWDEEV-EKARWFVAELEKIGGVK--QLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHG 346 (382)
T ss_pred cCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHH--HhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccc
Confidence 22222111 223333 45677888888876321 12222222233444433210 011223467778888764
Q ss_pred eccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 313 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 313 v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.|+...++.++. +.+++|+++..+++++++++
T Consensus 347 I~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~e 379 (382)
T COG1103 347 IQPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAE 379 (382)
T ss_pred cccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHH
Confidence 5666667888873 47899999999999999987
No 352
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.53 E-value=5.1e-12 Score=124.14 Aligned_cols=307 Identities=12% Similarity=0.048 Sum_probs=173.3
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCChH-HHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccc-cccccC-Cccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTGA-EGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLA-AISMSC-DNEA 96 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~gs-~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~-~~~~~~-~~~~ 96 (374)
.....+-++..++.+|.++.+|..||| .+|.+++.++ +.+| |.|++.+++ |-+... ++.+++ .|.|
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~-----~~~G-----d~VLvdRN~-HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNAL-----LTPG-----DLVLFDRNN-HKSNHHGALIQAGATPVY 241 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHh-----cCCC-----CEEEeeccc-HHHHHHHHHHHcCCeEEE
Confidence 344566777777788999875555554 5555555555 6788 999999999 555443 344443 4555
Q ss_pred cccCCCCCCCc-eeccCC--CHHHHHHHHHhcCCc-------EE-EEEEccccCCCCcccCChhHHHHHHHH-HHhcCCE
Q 017259 97 IRGFGPLLPGH-LKVDFG--DITALEKIFKESGDQ-------IA-GFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNIL 164 (374)
Q Consensus 97 ~~~~~~~~~~~-~~~~~~--d~~~le~~l~~~~~~-------~~-~vi~~~~~~~~g~~~~~~~~l~~l~~l-~~~~~i~ 164 (374)
......- .++ -.++.. +.+.++++|+++++. .+ +++++|.+ .|.+.+ +++|.++ |+.++ +
T Consensus 242 l~P~~n~-~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~ 313 (720)
T PRK13578 242 LETARNP-FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-Y 313 (720)
T ss_pred eeccccc-cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-c
Confidence 4322110 111 111111 356799999887322 34 44444433 477877 9999998 68888 9
Q ss_pred EEEeccccCCcccccC---cccccCCCCCc----EEEec--ccccCCccchhhheeCHHHH---------hhcCCCC-CC
Q 017259 165 MIADEIQSGLARSGRM---LASDWEEVRPD----MVILG--KALGGGVIPVSAVLADKEVM---------LCIQPGE-HG 225 (374)
Q Consensus 165 li~Dea~~~~~~~g~~---~~~~~~~~~~d----~~s~s--K~~~~G~~~~G~~~~~~~~~---------~~~~~~~-~~ 225 (374)
|++||||+++-.-... +........+| +++-| |.+++ +...+++..+...+ +++.... ..
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~ 392 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLH 392 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHHHHHHH
Confidence 9999999864211121 11112234556 67777 66553 31333454433221 1222111 23
Q ss_pred CCCCCCHHHHHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCc----e----------------------
Q 017259 226 STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY----V---------------------- 276 (374)
Q Consensus 226 ~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~---------------------- 276 (374)
.|-+++-+.+++.-.+.+.+.. ..+.+...+....+++.+.+....+... +
T Consensus 393 qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~ 472 (720)
T PRK13578 393 ASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSF 472 (720)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccccc
Confidence 3445555555555554554443 2455666666666777662221111000 0
Q ss_pred --e-eEEE-----------EeeeEEEEeccCC--------CchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHH
Q 017259 277 --K-EVRG-----------RGLFNAVEFDKTA--------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNEL 334 (374)
Q Consensus 277 --~-~~~~-----------~g~~~~~~~~~~~--------~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i 334 (374)
. ..++ ...-+.+..+... .|..+..+.++|.++||++.-.+...+-+-++...+++++
T Consensus 473 ~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~ 552 (720)
T PRK13578 473 EPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKL 552 (720)
T ss_pred ccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHH
Confidence 0 0000 1111122222110 0222688999998899999998888888888888999999
Q ss_pred HHHHHHHHHHHh
Q 017259 335 QEGSKALHDVLE 346 (374)
Q Consensus 335 ~~~~~~l~~~~~ 346 (374)
+.++++|.++-+
T Consensus 553 ~~Lv~aL~~f~~ 564 (720)
T PRK13578 553 QQLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHHH
Confidence 999999987754
No 353
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.52 E-value=4e-12 Score=122.60 Aligned_cols=283 Identities=16% Similarity=0.104 Sum_probs=155.7
Q ss_pred EEecCChHHHHHHHHHHHHHcccccc---------cC-------CCCccEEEEeccCCCCcccccccccCCccccccCCC
Q 017259 39 VLPMNTGAEGVETALKLARKWGYVKK---------KF-------SIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGP 102 (374)
Q Consensus 39 ~~~~~~gs~a~~~al~~~~~~~~~~~---------G~-------~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 102 (374)
-++++|||+|+..|+.++|....... |. ...+..|++.+.. |.....+....+.+.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~-H~S~~kaa~~lglg~------- 233 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERG-HYSLGKAADVLGIGR------- 233 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCc-hHHHHHHHHHcCCCc-------
Confidence 57899999999999999987532111 10 0112455555555 444443333322110
Q ss_pred CCCCceeccCC-----CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 103 LLPGHLKVDFG-----DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 103 ~~~~~~~~~~~-----d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
..+..++.+ |+++|+++|++ .+.++-+++.......+|.+.| +++|.++|++||+++++|.+|++.
T Consensus 234 --~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~ 307 (522)
T TIGR03799 234 --DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGA 307 (522)
T ss_pred --ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhH
Confidence 122333332 79999999873 2223333333344556899999 999999999999999999999854
Q ss_pred cccccCcccccCCC-CCcEEEec--ccccCCccchhhheeC-HHHHhhcCCCC-----C-C-----CCCCCCHHH-HHHH
Q 017259 175 ARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGE-----H-G-----STFGGNPLA-SAVA 238 (374)
Q Consensus 175 ~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~-~~~~~~~~~~~-----~-~-----~~~~~~~~~-~~aa 238 (374)
......+.....++ ..|.++++ |.+.+.. ++|.++.+ +.+.+.+.... . . .++.++... ....
T Consensus 308 ~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~-g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~l 386 (522)
T TIGR03799 308 TLLSNTYRHLLKGIERADSVTIDAHKQLYVPM-GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLV 386 (522)
T ss_pred HHhCHHHHHHhcCchhCCEEEEChhhcCCcCc-ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHH
Confidence 21111111112343 57888888 8888777 78887765 45545444310 0 0 112121111 2346
Q ss_pred HHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC---------------c----
Q 017259 239 IASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---------------P---- 296 (374)
Q Consensus 239 ~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------------~---- 296 (374)
+.+++.+... .+.++..++.+++.+.|++. |++....++.-.++.|.+..... .
T Consensus 387 w~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~----~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~ 462 (522)
T TIGR03799 387 YAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ----PDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLD 462 (522)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHH
Confidence 6777777654 44555555666666655543 23322223333455555422110 0
Q ss_pred hhHHHHHHHHHHCCeE-eccC----------CCCEEEEec-CCCCCHHHHHHHHHH
Q 017259 297 VSAYDICLKMKERGIL-AKPT----------HDTIVRLTP-PLSISSNELQEGSKA 340 (374)
Q Consensus 297 ~~~~~~~~~l~~~Gi~-v~~~----------~~~~lRi~~-~~~~~~e~i~~~~~~ 340 (374)
.....+.+.+.+.|.. ++.. ....||+++ +...+.++++.+++.
T Consensus 463 ~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 463 RLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 0113455566666743 3321 124699976 344577888877653
No 354
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.1e-11 Score=110.81 Aligned_cols=295 Identities=16% Similarity=0.153 Sum_probs=183.6
Q ss_pred CcHHHHHHHHhc-ccCCCeE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccc--ccccCCccc
Q 017259 21 DKFPVFAERLTS-MFGYDMV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAA--ISMSCDNEA 96 (374)
Q Consensus 21 ~~~~~l~~~l~~-~~~~~~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~--~~~~~~~~~ 96 (374)
+..++++-..++ ++|.+.+ +-..||+.|+.+++.++ .++| |+|+..+-+.-|+..-. ..+++.- +
T Consensus 71 D~vE~laierak~LFga~~anVQPhSGs~AN~av~~Al-----l~pG-----Dtimgm~l~~GGHltHg~~v~~sG~~-~ 139 (413)
T COG0112 71 DEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLAL-----LQPG-----DTIMGLDLSHGGHLTHGSPVNFSGKL-F 139 (413)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHH-----cCCC-----CeEecccCCCCCcccCCCCCCcccee-E
Confidence 334455544444 5688865 77899999999999999 6778 99999888865553322 2233221 1
Q ss_pred cccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCc
Q 017259 97 IRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA 175 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~ 175 (374)
.....++..+... -|.|++++...++ +++.++.-. +......+ +++++++|++.|.+|.+|-+|- |+.
T Consensus 140 ~~v~Y~vd~et~~---IDyD~~~k~a~e~--kPK~ii~G~--SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLV 208 (413)
T COG0112 140 NVVSYGVDPETGL---IDYDEVEKLAKEV--KPKLIIAGG--SAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLI 208 (413)
T ss_pred EeEecccccccCc---cCHHHHHHHHHHh--CCCEEEECc--cccccccC----HHHHHHHHHHhCceEEehHHHHHHHH
Confidence 1111111111000 1788999888876 555665522 22334555 9999999999999999999997 553
Q ss_pred ccccCcccccCCCCCcEEEec--ccccCCccchhhheeCH-HHHhhcCCCCCCCCCCCC-HHHHHHHHHHHHHHhhh---
Q 017259 176 RSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADK-EVMLCIQPGEHGSTFGGN-PLASAVAIASLDVIRDE--- 248 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~aa~~al~~~~~~--- 248 (374)
-.|.. . .... ..|+++-+ |+|.|+ |.|.+++++ ++.+++.....-...+++ .-..++-..++....+.
T Consensus 209 A~G~~-p-~P~~-~AdvVTtTTHKTlrGP--rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk 283 (413)
T COG0112 209 AGGVH-P-NPLP-HADVVTTTTHKTLRGP--RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFK 283 (413)
T ss_pred hcccC-C-CCCC-ccceEeCCcccCCCCC--CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHH
Confidence 22321 1 1111 36788665 888865 567788874 888888764332233332 23333333344444333
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEecc----------CCC
Q 017259 249 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----------THD 318 (374)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~----------~~~ 318 (374)
++.+++.++.+.+.+.|.+.+.+ ++. -....+++.+++.+. +.+..+....|-+.||.+.- ...
T Consensus 284 ~Ya~qVv~NAkaLAe~l~~~G~~---vvs-GgTdnHl~lVDl~~~--~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~t 357 (413)
T COG0112 284 EYAKQVVKNAKALAEALKERGFK---VVS-GGTDNHLVLVDLRSK--GLTGKKAEAALERAGITVNKNAIPFDPESPFVT 357 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCe---Eec-CCccceEEEEEcccC--CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCC
Confidence 56777788888888888775432 222 122356777777632 22566777777788999843 235
Q ss_pred CEEEEecC----CCCCHHHHHHHHHHHHHHHhccC
Q 017259 319 TIVRLTPP----LSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 319 ~~lRi~~~----~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..|||..+ ....++|++++.+.|.++++ ..
T Consensus 358 SGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~-~~ 391 (413)
T COG0112 358 SGIRIGTPAVTTRGFGEAEMEEIADLIADVLD-GL 391 (413)
T ss_pred ccceeccHHHhhcCCCHHHHHHHHHHHHHHHh-cc
Confidence 78999654 34567899999999999887 54
No 355
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.7e-11 Score=106.48 Aligned_cols=293 Identities=18% Similarity=0.177 Sum_probs=186.8
Q ss_pred cHHHHHHHHhcccCC--CeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC-CCCcccccccccCCccccc
Q 017259 22 KFPVFAERLTSMFGY--DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC-FHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 22 ~~~~l~~~l~~~~~~--~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~-yhg~~~~~~~~~~~~~~~~ 98 (374)
.-+.+..+|+-+.|. .++..+.|.+--+...+-+... ..+| ++||+++.. |....+.+..+.. ...
T Consensus 77 lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr---~~~~-----r~vIv~E~~~fpTdly~a~g~~~---~~~ 145 (407)
T COG3844 77 LPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALR---PQEG-----RRVIVSEGDNFPTDLYIAEGLAD---LLG 145 (407)
T ss_pred chhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhc---cCCC-----ceEEeecCCCCCcchhhhcchhh---hhc
Confidence 344566677776654 4788888877555545544432 3335 666666654 4333333332221 100
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
. ..++..+ ..+.+++++++ +.+++++++.++.-||...+ +.+|..++|+||+++++|=+|+. |
T Consensus 146 ~----~~~~~~~--~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHsa----G 208 (407)
T COG3844 146 I----GYDLEGV--IAPRALEEAIT---DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHSA----G 208 (407)
T ss_pred c----cccceee--eChHHHHHhhc---cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhccc----C
Confidence 0 0011111 15778888888 68999999999999999998 99999999999999999999982 1
Q ss_pred cCcccccCCCCCcE--EEecccccCCccchhhheeCHHHHhhcCCC--------------------CCCC---CCCCCHH
Q 017259 179 RMLASDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPG--------------------EHGS---TFGGNPL 233 (374)
Q Consensus 179 ~~~~~~~~~~~~d~--~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~--------------------~~~~---~~~~~~~ 233 (374)
. +..+.-....|+ .+.-|-+-||--..+++...++..+...+. .... .-..+.+
T Consensus 209 a-vp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~ 287 (407)
T COG3844 209 A-VPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVL 287 (407)
T ss_pred C-cceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchh
Confidence 1 122222233343 344476665431334455444443332211 1111 1134677
Q ss_pred HHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCcee----eEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 234 ASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 234 ~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
++++...+|+...+- +++++.-.+.+++.+.++..-..+ ++-. .-..+|..+.+..+ ...++.++|
T Consensus 288 s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~-~l~l~tPr~~~~rGsqvS~~hp------~~~~V~qaL 360 (407)
T COG3844 288 SLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYY-GLTLVTPRAHEERGSQVSLYHP------HGYQVMQAL 360 (407)
T ss_pred hhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccC-CcEEeccchhhhccceeeEecC------cHHHHHHHH
Confidence 788888888876553 556666677788877776654322 1211 22345777777666 578999999
Q ss_pred HHCCeEeccCCCCEEEEec-CCCCCHHHHHHHHHHHHHHHhccCCc
Q 017259 307 KERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK 351 (374)
Q Consensus 307 ~~~Gi~v~~~~~~~lRi~~-~~~~~~e~i~~~~~~l~~~~~~~~~~ 351 (374)
.++||+.--..++.+|+.| |+..+-+|+=.+++.|.++++ ....
T Consensus 361 i~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~-t~a~ 405 (407)
T COG3844 361 IDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLD-TLAW 405 (407)
T ss_pred HHcCccccccCCCeeeecCccceechhHHHHHHHHHHHHHH-hhcc
Confidence 9999998888899999987 578899999999999999998 6654
No 356
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.49 E-value=9.1e-12 Score=122.29 Aligned_cols=303 Identities=11% Similarity=0.057 Sum_probs=179.2
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCCh-HHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Ccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTG-AEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEAI 97 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~g-s~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~~ 97 (374)
.....+.++..++.+|+++.+|..|| |.++.+++.++ +.+| |.|++.+.+ |-+...++.+++ .|.|.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~-----~~~G-----d~VLvdRN~-HKSv~haLilsga~PVYl 262 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYS-----APAG-----STVLIDRNC-HKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHh-----cCCC-----CEEEeeccc-HHHHHHHHHHcCCeEEEe
Confidence 34456777788888999987666655 55555555555 6778 999999999 555555555544 45554
Q ss_pred ccCCCCCCCc-eeccCC--CHHHHHHHHHhcCCcE---EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 98 RGFGPLLPGH-LKVDFG--DITALEKIFKESGDQI---AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 98 ~~~~~~~~~~-~~~~~~--d~~~le~~l~~~~~~~---~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
...... .++ -.++.. +.+.++++|+++++.. ++++++|.+ .|.+.+ +++|.++|+.++ |++||||
T Consensus 263 ~P~rn~-~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 263 RPTRNA-YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred cccccc-cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccc
Confidence 322110 000 011111 4799999999876422 466666643 487887 999999999887 6899999
Q ss_pred cCCcccccCcc-ccc--CCCC-Cc--EEEec--ccccCCccchhhheeC-----HHHHhhcCCCCCCCCCCCCHHHHHHH
Q 017259 172 SGLARSGRMLA-SDW--EEVR-PD--MVILG--KALGGGVIPVSAVLAD-----KEVMLCIQPGEHGSTFGGNPLASAVA 238 (374)
Q Consensus 172 ~~~~~~g~~~~-~~~--~~~~-~d--~~s~s--K~~~~G~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~aa 238 (374)
.++..-...+. ... .+-. .+ +++-| |.+++ +...+++..+ +.+.+.+. ...|-+++-+.+++.
T Consensus 334 gah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~---m~~STSPsY~l~ASL 409 (714)
T PRK15400 334 VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM---MHTTTSPHYGIVAST 409 (714)
T ss_pred hhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH---HHcCCCcHHHHHHHH
Confidence 86422122111 111 1111 13 56666 76653 2122233222 22222232 334556666666666
Q ss_pred HHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCC-CceeeE-------------------EE-----------Eee
Q 017259 239 IASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEV-------------------RG-----------RGL 284 (374)
Q Consensus 239 ~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~-------------------~~-----------~g~ 284 (374)
-.+.+.+.. ..+.++..+....+++.+.++..... ++.... ++ .+.
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~ 489 (714)
T PRK15400 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (714)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCc
Confidence 666666643 24566677777777777766432000 000000 00 111
Q ss_pred eEEEEeccCC-------CchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 285 FNAVEFDKTA-------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 285 ~~~~~~~~~~-------~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
-+.+..+... .|..+..+.++|.++||++.-.+...+-+.++...++++++.++++|.++-+
T Consensus 490 Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 490 KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1222222200 1345778999999999999999888888888899999999999999987643
No 357
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.48 E-value=1.9e-11 Score=120.08 Aligned_cols=302 Identities=12% Similarity=0.081 Sum_probs=178.0
Q ss_pred CCcHHHHHHHHhcccCCCeEEecCCh-HHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Ccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLPMNTG-AEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEAI 97 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~~~~g-s~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~~ 97 (374)
.....+.++..++.+|+++.+|..|| |.++.+++.++ +.+| |+|++.+.+ |-+...++.+++ .|.|.
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~-----~~~G-----d~VLvdRN~-HKSv~~aLilsga~PVYl 262 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYA-----APAG-----STLLIDRNC-HKSLAHLLMMSDVVPIWL 262 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHh-----cCCC-----CEEEeeccc-HHHHHHHHHHcCCeeEEe
Confidence 44466777788888999987665555 55555566655 6788 999999999 555444555544 45554
Q ss_pred ccCCCCCCCce-eccCC--CHHHHHHHHHhcCCc---EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEE-EEecc
Q 017259 98 RGFGPLLPGHL-KVDFG--DITALEKIFKESGDQ---IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM-IADEI 170 (374)
Q Consensus 98 ~~~~~~~~~~~-~~~~~--d~~~le~~l~~~~~~---~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~l-i~Dea 170 (374)
.....- .++. .++.. +.+.++++|+++++. .++++++|.+ .|.+.+ +++|.++| |+.+ ++|||
T Consensus 263 ~P~~n~-~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 263 KPTRNA-LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred cccccc-cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEecc
Confidence 322110 0110 01111 458999999987643 3555555533 487777 89999998 6766 69999
Q ss_pred ccCCcccccCcc-ccc--CCCCCcEE---Eec--ccccCCccchhhheeCH-----HHHhhcCCCCCCCCCCCCHHHHHH
Q 017259 171 QSGLARSGRMLA-SDW--EEVRPDMV---ILG--KALGGGVIPVSAVLADK-----EVMLCIQPGEHGSTFGGNPLASAV 237 (374)
Q Consensus 171 ~~~~~~~g~~~~-~~~--~~~~~d~~---s~s--K~~~~G~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a 237 (374)
|.++..-...+. ... .+-.+|.+ +-| |.+++ +...+++..+. .+.+.+. ...|-+++-+.+++
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~---m~~STSPsY~LmAS 408 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFM---MHTSTSPSYPIVAS 408 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHH---HHcCCCcHHHHHHH
Confidence 986422112111 111 11134655 555 76553 21222333322 2222232 33455666666666
Q ss_pred HHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCC-CceeeE-------------------EE-----------Ee
Q 017259 238 AIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEV-------------------RG-----------RG 283 (374)
Q Consensus 238 a~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~-------------------~~-----------~g 283 (374)
.-.+.+++.. ..+.++..+....+++.+.++..... ++.... ++ .+
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP 488 (713)
T PRK15399 409 VETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDP 488 (713)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCC
Confidence 6666666653 25566677777777777766532100 000000 00 11
Q ss_pred eeEEEEeccC-------CCchhHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 284 LFNAVEFDKT-------ALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 284 ~~~~~~~~~~-------~~~~~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.-+.+..+.. ..|.++..+.++|.++||++.-.+...+-+.++...++++++.++++|.++-+
T Consensus 489 ~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 489 VKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred ceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 1222222211 11456888999999999999999888888888889999999999999987643
No 358
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=5.1e-12 Score=112.52 Aligned_cols=299 Identities=17% Similarity=0.197 Sum_probs=172.8
Q ss_pred CCCCCcHHHHHHHHhccc-CCC---------eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccc
Q 017259 17 AFYNDKFPVFAERLTSMF-GYD---------MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLA 86 (374)
Q Consensus 17 ~~~~~~~~~l~~~l~~~~-~~~---------~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~ 86 (374)
+.+-....++.+.+.++. |.+ ..+.|.|||-|+..+-..+.... + +..|++++|++.-+...
T Consensus 65 Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~---~-----~~~vwis~PtW~NH~~I 136 (396)
T COG1448 65 YLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFF---P-----DATVWISDPTWPNHKAI 136 (396)
T ss_pred cCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhC---C-----CceEEeCCCCcHhHHHH
Confidence 344555667777777754 543 34789999999999998886432 2 26799999998555444
Q ss_pred cccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 017259 87 AISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li 166 (374)
....+-.-..+.-|.. .... -|.+.+-+.|+..+++.-+++-.+-+|||| +.+|.+.+++|.++.++.+++-+
T Consensus 137 f~~aGl~v~~Y~Yyd~---~~~~---~df~~mla~L~~a~~~~vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~lip~ 209 (396)
T COG1448 137 FEAAGLEVETYPYYDA---ETKG---LDFDGMLADLKTAPEGSVVLLHGCCHNPTG-IDPTEEQWQELADLIKERGLIPF 209 (396)
T ss_pred HHhcCCceeeeecccc---cccc---ccHHHHHHHHHhCCCCCEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCeee
Confidence 3333322111111111 1111 156666666776655554555555677777 55599999999999999999999
Q ss_pred EeccccCCcccccC--ccccc-CCCCCcE-E--EecccccC-Cccchhhhe--e-CHHHHhhcCCC---CCCCCCC-CCH
Q 017259 167 ADEIQSGLARSGRM--LASDW-EEVRPDM-V--ILGKALGG-GVIPVSAVL--A-DKEVMLCIQPG---EHGSTFG-GNP 232 (374)
Q Consensus 167 ~Dea~~~~~~~g~~--~~~~~-~~~~~d~-~--s~sK~~~~-G~~~~G~~~--~-~~~~~~~~~~~---~~~~~~~-~~~ 232 (374)
+|=+|-||+..... ..... ....+.+ + ||||.|+- |. |+|++. + +++....+..- ..-.+|+ ++.
T Consensus 210 ~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgE-RVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~ 288 (396)
T COG1448 210 FDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPA 288 (396)
T ss_pred eehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhh-ccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCch
Confidence 99999988532211 11111 1223333 2 88999995 88 888743 2 33333333210 1122333 233
Q ss_pred HHHHHHHHHHHH------Hhh--hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHH
Q 017259 233 LASAVAIASLDV------IRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 304 (374)
Q Consensus 233 ~~~~aa~~al~~------~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (374)
.++......|.. ++. +++++++.+.+..+.+.|++....- .+..-....|.|... . .+.+++-.
T Consensus 289 ~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~-~f~~i~~Q~GMFsy~---G----ls~~QV~r 360 (396)
T COG1448 289 HGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPR-NFDFIISQRGMFSYT---G----LSPEQVDR 360 (396)
T ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-ccchHhhcCceeecC---C----CCHHHHHH
Confidence 333322222211 111 2567777777777777777643220 011112223333221 1 15556555
Q ss_pred HHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 305 KMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 305 ~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
.--+.||++...+ ||++. ..++..++.+.++|.++
T Consensus 361 Lree~~IY~v~sG----Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 361 LREEFGIYLVASG----RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHhccEEEecCC----eeeec-cCChhhHHHHHHHHHhh
Confidence 5556799998775 88755 56788999999988765
No 359
>PLN02271 serine hydroxymethyltransferase
Probab=99.46 E-value=9.2e-11 Score=111.36 Aligned_cols=275 Identities=11% Similarity=-0.011 Sum_probs=165.0
Q ss_pred EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccc-cCCccccccCCCCCCCceeccC------
Q 017259 40 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPGHLKVDF------ 112 (374)
Q Consensus 40 ~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------ 112 (374)
+-.-||+.|+.+++..+ .++| |+|+..+..+-|+....... .+ ....+...........+
T Consensus 218 VQp~SGs~AN~aV~~AL-----l~PG-----D~IL~ldl~~GGHlshg~~~~~g---~~vs~sG~~~~~vpY~~d~~~g~ 284 (586)
T PLN02271 218 VQPYSCTSANFAVYTGL-----LLPG-----DRIMGLDSPSGGHMSHGYYTPGG---KKVSGASIFFESLPYKVNPQTGY 284 (586)
T ss_pred eeeccHHHHHHHHHHHh-----cCCC-----CEEEEecCCCCCchhcccccccc---cccccccceEEEEEcccccccCc
Confidence 44569999999999888 6778 99999988865553332111 00 00000000001111111
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCcccccCcccccCCCCCc
Q 017259 113 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD 191 (374)
Q Consensus 113 ~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d 191 (374)
-|.+++++.+.+ .+++++++....++ ...+ ++++.++|+++|+++++|.+|. |+...+.. . ... ...|
T Consensus 285 IDyd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~-~-sP~-~~aD 353 (586)
T PLN02271 285 IDYDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAKEC-V-NPF-DYCD 353 (586)
T ss_pred cCHHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccCcC-C-CCC-cCCc
Confidence 178888885543 47888988665444 4566 9999999999999999999998 54222211 0 111 2468
Q ss_pred EEEec--ccccCCccchhhheeCHHH--------------------HhhcCCCCC-CCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 192 MVILG--KALGGGVIPVSAVLADKEV--------------------MLCIQPGEH-GSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 192 ~~s~s--K~~~~G~~~~G~~~~~~~~--------------------~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
+++++ |++.|.. + |.++.+++. .+++..... +..-++.....++...+++.+...
T Consensus 354 vvt~TTHKtLrGPr-G-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ 431 (586)
T PLN02271 354 IVTSTTHKSLRGPR-G-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATP 431 (586)
T ss_pred EEEeCCcccCCCCC-c-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhCh
Confidence 88666 9998765 3 666666542 222221111 111122222345555556655443
Q ss_pred ---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC---------
Q 017259 249 ---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------- 316 (374)
Q Consensus 249 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--------- 316 (374)
++.+++.++.+.+.+.|.+.+.. ++.. ....+++++++... +.+.....+.|-+.||.+...
T Consensus 432 efk~Ya~QVv~NAkaLA~~L~~~G~~---vv~g-gTdnHlvLvDl~~~--g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~ 505 (586)
T PLN02271 432 EYKAYMQQVKKNAQALASALLRRKCR---LVTG-GTDNHLLLWDLTTL--GLTGKNYEKVCEMCHITLNKTAIFGDNGTI 505 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCe---EeeC-CCCcceeeecCccc--CCCHHHHHHHHHHcCeEeccccCCCCCCCC
Confidence 56677777788887777665432 2321 12457778777442 224666667777789988431
Q ss_pred CCCEEEEecC----CCCCHHHHHHHHHHHHHHHh
Q 017259 317 HDTIVRLTPP----LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 317 ~~~~lRi~~~----~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+..|||..+ ....++|++++.+.|.++++
T Consensus 506 ~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 506 SPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 3578999754 34577899999999888876
No 360
>PLN02452 phosphoserine transaminase
Probab=99.45 E-value=1e-11 Score=114.96 Aligned_cols=288 Identities=10% Similarity=0.012 Sum_probs=180.8
Q ss_pred CCcHHHHHHHHhcccCCC---e-EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc-CCc
Q 017259 20 NDKFPVFAERLTSMFGYD---M-VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS-CDN 94 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~---~-~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~-~~~ 94 (374)
...+.+.++.|.++++.+ + +++..|||.+++.++..+ +.+| +++++...++.|....-.+.. +..
T Consensus 51 ~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl-----~~~~-----~~~l~~~~G~fg~r~~~~a~~~g~~ 120 (365)
T PLN02452 51 LSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNL-----CKPG-----DKADFVVTGSWSKKAAKEAKKYCKT 120 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhc-----CCCC-----CeEEEEECCHHHHHHHHHHHHhCCC
Confidence 456777888888887642 3 466688999999999888 4455 666666655545332221111 110
Q ss_pred cccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 95 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~-~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
.... ..+ ........+++++ +. +++.+.+.+.+....+|.. .+ ++++. ++++|+|.+.+-
T Consensus 121 ~~~~-~~~---~~~~~~~~~~~~~----~~-~~~~~~v~~~hnETstGv~~~~----~~~i~------~~~lvVDa~Ss~ 181 (365)
T PLN02452 121 NVIA-SGK---DEKYTKIPSVSEW----EL-TPDAKFVHICANETIHGVEFKD----YPDVG------NVPLVADMSSNF 181 (365)
T ss_pred cEEE-ecC---CCCCCCCCChHHc----CC-CCCCcEEEECCCCCCCcEecCc----ccccC------CCeEEEECCccc
Confidence 0000 000 0000011134443 22 2467788888877778874 44 55553 389999999872
Q ss_pred CcccccCcccccCCCCCcEEEecccccCCccchhhheeCHHHHhhcCCC-----------CCCCC-CCCCHHHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-----------EHGST-FGGNPLASAVAIAS 241 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~aa~~a 241 (374)
. +.++..+.+++ ++.+.-|++| .- ++|+++.++++.+++... ..... ++++..+..+..++
T Consensus 182 g---~~pidv~~~~v--~~~saqK~lG-P~-Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~a 254 (365)
T PLN02452 182 L---SKPVDVSKYGV--IYAGAQKNVG-PS-GVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLV 254 (365)
T ss_pred c---CcccCHHHcCE--EEEecccccC-CC-CeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHH
Confidence 2 23334443433 5556669996 33 567888999888775432 01122 36688888899999
Q ss_pred HHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccCC
Q 017259 242 LDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH 317 (374)
Q Consensus 242 l~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 317 (374)
++++.++ .+.++.+++.+++++.|++....+...+.....+...+.|.+++.. ...+|.+.+.++|++..+++
T Consensus 255 L~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~---~~~~f~~~~~~~g~~~~~G~ 331 (365)
T PLN02452 255 FEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE---LEAEFVKEAAKAGMVQLKGH 331 (365)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch---hHHHHHHHHHHCCCcccCCc
Confidence 9998764 5667777788888888876421111111111123445666666543 67899999999999998875
Q ss_pred --CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 --DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 --~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
-+.+|++..-..+.++++.+++.+++.-+
T Consensus 332 r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 332 RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred cccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 23499998888999999999999988765
No 361
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.43 E-value=8.2e-12 Score=115.61 Aligned_cols=298 Identities=14% Similarity=0.122 Sum_probs=181.1
Q ss_pred HHHHHHHhccccCcCCCCCcHHHHHHHHhcccCC--C--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEecc
Q 017259 3 ALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY--D--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCG 78 (374)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~ 78 (374)
|+.+.+-...|.++. ....+.+..+.|.++++. + -++++.|||.++++++..+. .++| +++++. +
T Consensus 22 ~~~~~~~~~~HRs~~-F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~----~~~g-----~~vLv~-g 90 (374)
T TIGR01365 22 ELKNAPLGRSHRSKL-GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML----GCRG-----VDVLAW-E 90 (374)
T ss_pred HHhhhhcccCcCCHH-HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC----CCCC-----CeEEEE-C
Confidence 444444334444432 256677788888888764 2 25779999999999999883 1355 777764 3
Q ss_pred CCCCcccc---cccccCCccccccCCCCCCCceeccCC---CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHH
Q 017259 79 CFHGRTLA---AISMSCDNEAIRGFGPLLPGHLKVDFG---DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK 152 (374)
Q Consensus 79 ~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~ 152 (374)
. .|.... +...+... ......++. ++++++. + .. +++.+.-.++|...| ++
T Consensus 91 ~-FG~r~~~eia~~~g~~~----------v~~l~~~~g~~~~~~~ve~--~---~~---v~~vhnETSTGv~np----v~ 147 (374)
T TIGR01365 91 S-FGKGWVTDVTKQLKLPD----------VRVLEAEYGKLPDLKKVDF--K---ND---VVFTWNGTTSGVRVP----NG 147 (374)
T ss_pred H-HHHHHHHHHHHhcCCCC----------cEEEcCCCCCCCCHHHcCC--C---CC---EEEecCCCchheecc----cc
Confidence 3 354322 11111100 111112222 5666652 1 12 456666677888887 65
Q ss_pred HHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCcEE--EecccccCCccchhhheeCHHHHhhcCCC--------
Q 017259 153 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPG-------- 222 (374)
Q Consensus 153 ~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G~~~~~~~~~~~~~~~-------- 222 (374)
++.+.+ ++.++|+|.+-+ ++ +.++..+ + .|++ +..|++++.- ++++++.+++..++....
T Consensus 148 ~i~~~~--~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~ 217 (374)
T TIGR01365 148 DFIPAD--REGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPK 217 (374)
T ss_pred cccccc--CCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChh
Confidence 555322 589999999876 32 3333333 2 4655 4449999644 557788887766554310
Q ss_pred ---------------CCCCCCCCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHH-HhCCCcee-eEEE
Q 017259 223 ---------------EHGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQ-QQFPNYVK-EVRG 281 (374)
Q Consensus 223 ---------------~~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-~~~~ 281 (374)
.....+.++..+..++..+++++.++ +..++.+++.+.+++.+++++ ..+ ... ....
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~--~~~~~~~r 295 (374)
T TIGR01365 218 IFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHF--LAETPEIR 295 (374)
T ss_pred hhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCChhhc
Confidence 01223455666677777778766553 567777888888888888875 221 111 1122
Q ss_pred EeeeEEEEeccCCC---chh-----HHHHHHHHHHCCeEeccCC----CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 282 RGLFNAVEFDKTAL---PVS-----AYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 282 ~g~~~~~~~~~~~~---~~~-----~~~~~~~l~~~Gi~v~~~~----~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+...+.+.++.... ..+ ..++.+.|.++||.+.++. +..|||...-..+.+|++.+++.|+=+..
T Consensus 296 S~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 296 SNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred CCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 34444455533210 002 5789999999999998753 48899987778899999999999976654
No 362
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.43 E-value=1.1e-10 Score=107.76 Aligned_cols=326 Identities=18% Similarity=0.153 Sum_probs=187.3
Q ss_pred HHHHHHHhccccCcCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEe------
Q 017259 3 ALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSC------ 76 (374)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~------ 76 (374)
+|.+++..+.. .+..++-+.+|++..++++|.+.++++.+|..+...+++++.. ++| +++++.
T Consensus 58 ~m~aAM~~GDD--~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~----~~g-----~e~g~~~~~~~v 126 (467)
T TIGR02617 58 SMQAAMMRGDE--AYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIK----KRE-----QEKGLDRSKMVA 126 (467)
T ss_pred HHHHHHHcCCc--ccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcc----ccc-----cccccccccccc
Confidence 44555544322 1344777889999999999999999999999999999988842 245 555522
Q ss_pred ccCCCCccc-ccccccCCccccccCCC--CCCCceeccC---CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChh
Q 017259 77 CGCFHGRTL-AAISMSCDNEAIRGFGP--LLPGHLKVDF---GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDG 149 (374)
Q Consensus 77 ~~~yhg~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~ 149 (374)
...||..+. +...+++..... ...+ ..... ..++ -|+++++++|+.++ +++..+.+.-..|..|+.+.|.+
T Consensus 127 ~hn~~fett~g~a~l~G~~~~~-l~~~ea~~~~~-~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvsle 204 (467)
T TIGR02617 127 FSNYFFDTTQGHSQINGCTARN-VYTKEAFDTGV-RYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLA 204 (467)
T ss_pred ceEEEEecchHHHHHcCceeec-ccchhhccccc-CCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHH
Confidence 223333322 222233211100 0000 00000 0111 18999999998653 34555555545566666667999
Q ss_pred HHHHHHHHHHhcCCEEEEeccccC----C------cccccCcc-c-ccCCCCCcEE--EecccccCCccchhh-heeC-H
Q 017259 150 YLKAVRDLCSKYNILMIADEIQSG----L------ARSGRMLA-S-DWEEVRPDMV--ILGKALGGGVIPVSA-VLAD-K 213 (374)
Q Consensus 150 ~l~~l~~l~~~~~i~li~Dea~~~----~------~~~g~~~~-~-~~~~~~~d~~--s~sK~~~~G~~~~G~-~~~~-~ 213 (374)
.++++.++|++||++++.|.+.-. | ++.+.... + ....-..|.+ |+||.++ +|+|. ++++ +
T Consensus 205 nlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg---ApvGg~Lag~d~ 281 (467)
T TIGR02617 205 NLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM---VPMGGLLCFKDD 281 (467)
T ss_pred HHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC---CcccceEEecch
Confidence 999999999999999999976531 1 11221100 0 0001234655 6668776 26665 4454 4
Q ss_pred ---HHHhhcCCC----CCCCCCCC-CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeee
Q 017259 214 ---EVMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 285 (374)
Q Consensus 214 ---~~~~~~~~~----~~~~~~~~-~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~ 285 (374)
++++.++.. ....||++ +.=-+.|....|+..-++++.+..-...+++.++|.+.+ ++... ..|+-
T Consensus 282 ~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~G-----vpi~~-~Ggha 355 (467)
T TIGR02617 282 SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIG-----VVCQQ-AGGHA 355 (467)
T ss_pred hHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCC-----CcEEe-cCccE
Confidence 344554432 22345543 333334444456655556777777788888888887763 33322 34444
Q ss_pred EEEEe----ccCCC-chhHHHHHHHHH-HCCeEe---ccC--------------CCCEEEEecC-CCCCHHHHHHHHHHH
Q 017259 286 NAVEF----DKTAL-PVSAYDICLKMK-ERGILA---KPT--------------HDTIVRLTPP-LSISSNELQEGSKAL 341 (374)
Q Consensus 286 ~~~~~----~~~~~-~~~~~~~~~~l~-~~Gi~v---~~~--------------~~~~lRi~~~-~~~~~e~i~~~~~~l 341 (374)
+.++. |..+. .-.+..++..|- +.||-. ... ....+|+++| ..-|.+++|..++++
T Consensus 356 v~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~ 435 (467)
T TIGR02617 356 AFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAF 435 (467)
T ss_pred EEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHH
Confidence 44432 21111 124566766664 445532 110 1368899776 456999999999999
Q ss_pred HHHHhccCCc
Q 017259 342 HDVLELDLPK 351 (374)
Q Consensus 342 ~~~~~~~~~~ 351 (374)
..+.+ ....
T Consensus 436 ~~~~~-~~~~ 444 (467)
T TIGR02617 436 KHVKE-NAPN 444 (467)
T ss_pred HHHHh-hhhh
Confidence 99887 4433
No 363
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.1e-11 Score=108.25 Aligned_cols=298 Identities=13% Similarity=0.087 Sum_probs=169.8
Q ss_pred CCCCcHHHHHHHHhcccC----CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 18 FYNDKFPVFAERLTSMFG----YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~----~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+..-.++.+++.+.+.-| ++.|++|.|+|.|+...|.++. ..+. +-|+++-|-|.-+.....-+++.
T Consensus 114 Gv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~----~~~~-----~GvliPiPQYPLYsAti~l~~~~ 184 (475)
T KOG0258|consen 114 GVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLI----AGKK-----TGVLIPIPQYPLYSATISLLGGT 184 (475)
T ss_pred CChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHh----cCCC-----CceEeecCCCchhHHHHHHhCCc
Confidence 444456667777766544 4589999999999999999886 2233 88999999995443332222221
Q ss_pred --ccccccCCCCCCCceeccCCCHHHHHHHHHhcC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 94 --NEAIRGFGPLLPGHLKVDFGDITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 94 --~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
+.+.... ..|.. |.++|++.+++.. =+++++++-++.|+||.+. |++-+++|.++|.++++.|+.||
T Consensus 185 ~v~YyLdEe----~~W~l----d~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvl-s~e~ie~i~~fa~~~~l~llaDE 255 (475)
T KOG0258|consen 185 QVPYYLDEE----SNWSL----DVAELERSVDEARKGINPRALVVINPGNPTGQVL-SEENIEGIICFAAEEGLVLLADE 255 (475)
T ss_pred ccceeeccc----cCCCC----CHHHHHHHHHHHhccCCceEEEEECCCCccchhh-cHHHHHHHHHHHHHcCeEEechH
Confidence 1111000 11111 7888888877532 3466766667778888777 99999999999999999999999
Q ss_pred cccCCccc-c-cCcccc----cC-CCCCc------EEEecccccC--Cccchhhhe---eCHHHHhhcCCCCCCCCCCCC
Q 017259 170 IQSGLARS-G-RMLASD----WE-EVRPD------MVILGKALGG--GVIPVSAVL---ADKEVMLCIQPGEHGSTFGGN 231 (374)
Q Consensus 170 a~~~~~~~-g-~~~~~~----~~-~~~~d------~~s~sK~~~~--G~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~ 231 (374)
+|-+-.+. + ++.++. .. ...++ +-+.||++.| |. |.|++= ..++..+.+.... ....+.+
T Consensus 256 VYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~-RGGYmEv~n~~prv~~qi~Kl~-si~lc~~ 333 (475)
T KOG0258|consen 256 VYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQ-RGGYMESLNRDPRVKQQIKKLA-SIKLCPQ 333 (475)
T ss_pred HHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecc-cCCeeecccCChhHHHHHHHHH-hhhhcCC
Confidence 99863232 3 232221 11 12332 2266898776 88 888852 2233333322110 0000100
Q ss_pred HHHHHH----------HHHHHHH--HhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCC----
Q 017259 232 PLASAV----------AIASLDV--IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL---- 295 (374)
Q Consensus 232 ~~~~~a----------a~~al~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---- 295 (374)
.-+++. +-.+.+. -+.+.+.+.++.+.+.+.+.++.+ ..+...+.+|.|+.|.-...+.
T Consensus 334 V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~-----~gi~cn~~qGAMY~fP~i~lP~kaie 408 (475)
T KOG0258|consen 334 VSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL-----EGISCNPVQGAMYLFPQISLPPKAIE 408 (475)
T ss_pred ccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc-----CceeeccCccceeecccccCCHHHHH
Confidence 000000 0011111 122456777777777777766655 3445556678888764222111
Q ss_pred -----chhHHH-HHHHHHHC-CeEeccCC-------CCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 296 -----PVSAYD-ICLKMKER-GILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 296 -----~~~~~~-~~~~l~~~-Gi~v~~~~-------~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+...++ .|..|++. ||-+.|++ .-++|.++ +... + ..++++++.-
T Consensus 409 ~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~Ti---Lp~~-~-~~i~~~~~fH 467 (475)
T KOG0258|consen 409 AAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTI---LPPG-L-EIIEKFKKFH 467 (475)
T ss_pred HHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEee---cCch-h-HHHHHHHHHH
Confidence 122233 45567765 99999873 34778872 2222 3 4555555443
No 364
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.40 E-value=4.7e-11 Score=110.26 Aligned_cols=277 Identities=17% Similarity=0.155 Sum_probs=153.9
Q ss_pred HHHhcccCCC----eE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC----Cccccc
Q 017259 28 ERLTSMFGYD----MV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC----DNEAIR 98 (374)
Q Consensus 28 ~~l~~~~~~~----~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~----~~~~~~ 98 (374)
++.++.++.+ .+ +-..||+.|+.+++.++ .++| |+|+..+...-|+..-...... .....
T Consensus 73 ~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL-----l~pG-----D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~- 141 (399)
T PF00464_consen 73 ERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL-----LKPG-----DTIMGLSLPHGGHLSHGSSVNFKKISASGLY- 141 (399)
T ss_dssp HHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH-----T-TT------EEEEEEGGGT--GGGT-TTSHSBSSHHHHH-
T ss_pred HHHHHHhCCCcccceEEeecCCchHHHHHHHHHH-----Hhhc-----CcEEecChhhcccccccccccccccccccce-
Confidence 3334456888 55 77889999999999998 6778 9999999876444221111100 00000
Q ss_pred cCCCCCCCceeccC------CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 99 GFGPLLPGHLKVDF------GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 99 ~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.+....++ -|.+++++.++++ ++++|++-.... -...+ +++++++|++.|.+|++|-+|.
T Consensus 142 ------~~~~~y~~d~~~~~ID~d~l~~~a~~~--kPklIi~G~S~y--~~~~d----~~~~reIad~vga~l~~D~sH~ 207 (399)
T PF00464_consen 142 ------FESVPYPVDPDTGLIDYDELEKLAKEH--KPKLIICGASSY--PRPID----FKRFREIADEVGAYLMADISHI 207 (399)
T ss_dssp ------SEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE-SST--SS-------HHHHHHHHHHTT-EEEEE-TTT
T ss_pred ------EEEEeeeeecCCCeECHHHHHHHHhhc--CCCEEEECchhc--cCccC----HHHHHHHHHhcCcEEEeccccc
Confidence 00111111 1789999988876 666777755332 22344 8999999999999999999997
Q ss_pred -CCcccccCcccccCCCCCcEEEec--ccccCCccchhhheeC--------------HHHHhhcCCCCCCCCC-CCCHHH
Q 017259 173 -GLARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD--------------KEVMLCIQPGEHGSTF-GGNPLA 234 (374)
Q Consensus 173 -~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~ 234 (374)
|+.-.|. +. +.+. ..|+++.| |+|.|. +.|.++.+ +++.+++.....-... +...-.
T Consensus 208 ~GLIa~g~-~~-~P~~-~ADvvt~sThKtl~GP--rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~ 282 (399)
T PF00464_consen 208 AGLIAGGL-FP-NPFP-YADVVTGSTHKTLRGP--RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHR 282 (399)
T ss_dssp HHHHHTTS-S---GCC-TSSEEEEESSGGG-SS--S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHH
T ss_pred ccceehhe-ec-Cccc-cceEEEeecccccccc--CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhH
Confidence 5432221 11 2223 36898777 888865 46678888 6777776643221111 223333
Q ss_pred HHHHHHHHHHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCe
Q 017259 235 SAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 311 (374)
Q Consensus 235 ~~aa~~al~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 311 (374)
.++...++..+.. .++.+++.++.+.+.+.|.+.+.. ++.. ....+++++++.... .+..+..+.|.+.||
T Consensus 283 iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~---v~~g-gTd~H~vlvd~~~~~--~~g~~a~~~Le~~gI 356 (399)
T PF00464_consen 283 IAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFK---VVTG-GTDNHQVLVDLRSFG--IDGKEAEKALEEAGI 356 (399)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-E---EGGG-S-SSSEEEEEGGGGT--S-HHHHHHHHHHTTE
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEC-CCCCCeEEEEecccc--cchHHHHHHHHhcCe
Confidence 3344444554433 267788888888888888876543 2221 235678888875421 267788888889999
Q ss_pred Eecc----C-----CCCEEEEecC----CCCCHHHHHHHHHH
Q 017259 312 LAKP----T-----HDTIVRLTPP----LSISSNELQEGSKA 340 (374)
Q Consensus 312 ~v~~----~-----~~~~lRi~~~----~~~~~e~i~~~~~~ 340 (374)
.+.. . ....|||..+ ....++|++++.+.
T Consensus 357 ~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 357 IVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp E-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred eecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 9953 1 2578999754 34567777766554
No 365
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.40 E-value=5.5e-13 Score=119.30 Aligned_cols=193 Identities=19% Similarity=0.140 Sum_probs=120.2
Q ss_pred HHHHHHHhccccC-cCCCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC-
Q 017259 3 ALQEQAEKLTLSS-RAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF- 80 (374)
Q Consensus 3 a~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y- 80 (374)
+|.+++.+.+... .++.++...++++++++.+|.+.++|++||+.|+..+++.+. .++ +.|+...+++
T Consensus 10 ~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~-----~~~-----~~vi~~~~aHi 79 (290)
T PF01212_consen 10 AMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHL-----RPG-----ESVICADTAHI 79 (290)
T ss_dssp HEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHH-----HTT-----EEEEEETTEHH
T ss_pred HHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHH-----hcC-----Cceecccccee
Confidence 3444444433322 356677788899999999999999999999999999999995 344 7788776652
Q ss_pred CCcccccc-cccCCccccccCCCCCCC-ceeccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 017259 81 HGRTLAAI-SMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVR 155 (374)
Q Consensus 81 hg~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~---~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~ 155 (374)
+.+...+. .+++.-...... .+ .. -|+++|++.+.. |..++++|.++.+.+..|+.+++.+++++|.
T Consensus 80 ~~~E~ga~~~~~G~~~~~l~~----~~~G~----l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 80 HFDETGAIEELSGAKLIPLPS----DDDGK----LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp HHSSTTHHHHHTTCEEEEEBE----CTGTB----B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred eeeccchhhHhcCcEEEECCC----cccCC----CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 22222222 122210000000 00 11 179999999997 3468999999998887666666999999999
Q ss_pred HHHHhcCCEEEEeccccC--CcccccCcccccCCCCCcEEEec--ccccCCccchhh-heeCHHHHhh
Q 017259 156 DLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSA-VLADKEVMLC 218 (374)
Q Consensus 156 ~l~~~~~i~li~Dea~~~--~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~-~~~~~~~~~~ 218 (374)
++|++||++|+.|.+.-. ....+. ......-..|++++| |.++ . ++|. +++++++++.
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~~~~~D~v~~~~tK~~g--~-~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAAALGV--SLAEIAAGADSVSFGGTKNGG--A-PGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHCHHHH--HHHHHHTTSSEEEEETTSTT---S-SSEEEEEESHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhhcccc--cHHHHhhhCCEEEEEEEcccc--c-ccceEEEechHHHHH
Confidence 999999999999988531 101111 111111345777554 7655 2 4444 6678875443
No 366
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.39 E-value=3.4e-11 Score=114.18 Aligned_cols=266 Identities=17% Similarity=0.095 Sum_probs=154.6
Q ss_pred HHHHHHhcccCC-C--eEEecCChHHHHHHHHHHHHHcccccc----cCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 25 VFAERLTSMFGY-D--MVLPMNTGAEGVETALKLARKWGYVKK----KFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 25 ~l~~~l~~~~~~-~--~~~~~~~gs~a~~~al~~~~~~~~~~~----G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
++..++++.++. + .-.||+|||+|+..++.+++..+.... +.+.+.-+|+ .+.+.|.....+..+.+-....
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii-~s~~aH~s~~Kaa~~lG~~~~~ 183 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIV-CSETAHFSFEKAARYLGLGLRR 183 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEE-ecCcchhHHHHHHHHhCCCcee
Confidence 355556666655 4 358999999999999999986651111 1111112344 4444566666655554422211
Q ss_pred ccCCCCCCCceecc--CC-CHHHHHHHHHhcCCcEEE--EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHLKVD--FG-DITALEKIFKESGDQIAG--FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~~~~--~~-d~~~le~~l~~~~~~~~~--vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
+..++ +. |++++++++.+. +.. |+......++|.+-| +++|.++|+++++++++|.|++
T Consensus 184 ---------v~~~~~~~~id~~~l~~~i~~~---t~~g~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~G 247 (460)
T COG0076 184 ---------VPTVPTDYRIDVDALEEAIDEN---TIGGVVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFG 247 (460)
T ss_pred ---------EEeccCccccCHHHHHHHHHhh---ccCceEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEcccc
Confidence 11111 11 899999999953 333 666667777898888 9999999999999999999999
Q ss_pred CCcccccCcccc-cCCC-CCcEEEec--ccccCCccchhhheeCHH--HHhhcC--CCCCC----C--C--CCCCHHHHH
Q 017259 173 GLARSGRMLASD-WEEV-RPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQ--PGEHG----S--T--FGGNPLASA 236 (374)
Q Consensus 173 ~~~~~g~~~~~~-~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~~~--~~~~~~--~~~~~----~--~--~~~~~~~~~ 236 (374)
|+...-...... .+++ ..|-++++ |...... +.|+++.+++ +.+.+. ..... . + ++.+.-..+
T Consensus 248 G~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~-~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~ 326 (460)
T COG0076 248 GFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPI-GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQAL 326 (460)
T ss_pred ceeecccCccchhhcCCCCceEEEECcccccCCCC-CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHH
Confidence 752210000001 1122 23455555 7666666 7788887654 333332 11111 1 1 122333556
Q ss_pred HHHHHHHHHhhhcHH---HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchh-HHHHHHHHHHCCeE
Q 017259 237 VAIASLDVIRDEKLA---ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS-AYDICLKMKERGIL 312 (374)
Q Consensus 237 aa~~al~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~l~~~Gi~ 312 (374)
+..+.++.+..+++. ++..++.+++.+.|++.. .+-....+..+.+.|..++.. + ..+..+.+.+.|..
T Consensus 327 ~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~----~~e~~~~p~l~~V~fr~~~~~---~~~~~~~~~~~~~gw~ 399 (460)
T COG0076 327 ALYANLRRLGREGYRKLLDRTLELARYLAEELEKLG----DFELVNEPELPIVAFRLKDDE---DTLADLSERLDRRGWQ 399 (460)
T ss_pred HHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCC----CcEeecCCccceEEEEcCCcc---cchhchHHHHHhcCce
Confidence 677778877655544 444467777777776652 122223446667777764431 2 44556666667766
Q ss_pred ecc
Q 017259 313 AKP 315 (374)
Q Consensus 313 v~~ 315 (374)
+..
T Consensus 400 v~~ 402 (460)
T COG0076 400 VPA 402 (460)
T ss_pred eec
Confidence 643
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.36 E-value=1.1e-10 Score=119.02 Aligned_cols=275 Identities=13% Similarity=0.078 Sum_probs=165.9
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
..++...+++++|.+ ++-++.++|.+.++++...+ ..+| ++++|++.+..|.+...........
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~----~~~g---~~~~VlVs~~~hP~~~~v~~t~a~~------- 215 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNN----ILKG---KKKKFLIASNCHPQTIDVCQTRADG------- 215 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHh----cccC---CCCEEEEcCccCHhHHHHHHHhhhh-------
Confidence 446777788888765 79999999999998887664 3333 2388999888875544333332211
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCccccc
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGR 179 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~ 179 (374)
....+..++.++.+ .. .+.+.+++ ..+.+.+|.+.+ +++|.++||++|+++++ .++. +.+.
T Consensus 216 --~GieV~~v~~~~~~----~~---~~~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~lal~~--- 277 (993)
T PLN02414 216 --LGLEVVVADEKDFD----YS---SGDVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDLLALTM--- 277 (993)
T ss_pred --cCCEEEEecchhhc----cc---cCceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECHHHhcC---
Confidence 11223344432211 11 13455554 455567899988 99999999999999999 5443 1210
Q ss_pred CcccccCCCCCcEEEec--ccc---c-CCccchhhheeCHHHHhhcCCCCCC----------C--------------CCC
Q 017259 180 MLASDWEEVRPDMVILG--KAL---G-GGVIPVSAVLADKEVMLCIQPGEHG----------S--------------TFG 229 (374)
Q Consensus 180 ~~~~~~~~~~~d~~s~s--K~~---~-~G~~~~G~~~~~~~~~~~~~~~~~~----------~--------------~~~ 229 (374)
....-.+..|+++.+ |.. + ||- ..|++..++++...+-....+ . ...
T Consensus 278 --l~~pge~GADi~vgsgqKwg~P~G~GGP-~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaT 354 (993)
T PLN02414 278 --LKPPGEWGADIVVGSAQRFGVPMGYGGP-HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKAT 354 (993)
T ss_pred --CCCHhhccCcEEEECCCccccCCCCCCC-CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccc
Confidence 001223456776543 432 2 455 478888888875533211000 0 001
Q ss_pred CCHH---HHHHHHHHH--HHHhh---hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHH
Q 017259 230 GNPL---ASAVAIASL--DVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 230 ~~~~---~~~aa~~al--~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 301 (374)
.|.- ++.++++++ ..+.. +++.+++..+..+++++|+..+.. ... ......+.+.++ +..+
T Consensus 355 sNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~---~~~--~~~f~~vt~~~~------~~~~ 423 (993)
T PLN02414 355 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQ---VQS--LPFFDTVKVKCS------DADA 423 (993)
T ss_pred cchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCc---cCC--CCCcCeEEEecC------CHHH
Confidence 2332 333333322 11122 245677888888888888664322 111 111223333332 3578
Q ss_pred HHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 302 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
+.++|.++||.++....+.+|+|++..+|++||+.+++.|..
T Consensus 424 v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 424 IADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 999999999999877677899999999999999999999963
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.33 E-value=3.8e-10 Score=103.53 Aligned_cols=287 Identities=15% Similarity=0.092 Sum_probs=170.4
Q ss_pred CCcHHHHHHHHhcccCC-C--eE-EecCChHHHHHHHHHHHHHcccccccCCCCccEEE--EeccCCCCcccccccccCC
Q 017259 20 NDKFPVFAERLTSMFGY-D--MV-LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIV--SCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~-~--~~-~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi--~~~~~yhg~~~~~~~~~~~ 93 (374)
...+.+..+.|.+.++. + ++ ++..|||.+.+.+...+ ..+| ++++ +..+.| |....-.+..-
T Consensus 48 ~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl-----l~~g-----~~~~~~~~tG~f-g~r~~~ea~~~- 115 (364)
T PRK12462 48 SSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF-----SRPG-----AAAPEYVTTGYW-SRKAIGEASRV- 115 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc-----CCCC-----CcEEEEEeCCHH-HHHHHHHHHhc-
Confidence 44566778888887764 2 45 55555999999888888 4555 6443 444443 43222111110
Q ss_pred ccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 94 NEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
............+...+ .+++++ +. ++..+.+.+.+....+|...+ ++.+.++.++|+|-+-+
T Consensus 116 g~v~~~~~~~~~~~~~~--p~~~~~----~~-~~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~- 178 (364)
T PRK12462 116 AAMRVVWDGAASGYRTL--PSLAEL----DW-DARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD- 178 (364)
T ss_pred CCceEecCcCCCCCCcC--CCHHHh----cc-CCCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-
Confidence 01111000000111111 134443 21 135677778777777787764 23334799999998865
Q ss_pred CcccccCcccccCCCCCcEEEe--cccccCCccchhhheeCHHHHhhcCCC-----------CCCCC-CCCCHHHHHHHH
Q 017259 174 LARSGRMLASDWEEVRPDMVIL--GKALGGGVIPVSAVLADKEVMLCIQPG-----------EHGST-FGGNPLASAVAI 239 (374)
Q Consensus 174 ~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~G~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~aa~ 239 (374)
++ +.++..+.+ |++.. -|+++ .- +++.++.++++.++.... ....+ ++++.+...++.
T Consensus 179 ~~--s~pid~~~~----dvi~agsQKnlg-P~-Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~ 250 (364)
T PRK12462 179 FM--SRPFDVEAY----GMVYAHAQKNLG-PA-GVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMA 250 (364)
T ss_pred hh--CCCCChHHc----cEEEeeccccCC-CC-ceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHH
Confidence 31 333343333 66643 49998 33 456778888887765432 01223 367888888999
Q ss_pred HHHHHHhhh-----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec
Q 017259 240 ASLDVIRDE-----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 314 (374)
Q Consensus 240 ~al~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 314 (374)
.+++++.++ .+.++.++..+.+++.+.+....++..+.....+-.-+.|.+.+.. ...+|.+.+.++|+.--
T Consensus 251 ~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~---l~~~f~~~a~~~gl~~l 327 (364)
T PRK12462 251 LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPR---LDTLFKEQSTEAGFCGL 327 (364)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHH---HHHHHHHHHHHCCCccc
Confidence 999998665 4556666677777777766542222122212222233344555443 57789999999998886
Q ss_pred cCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 315 PTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 315 ~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.++ -+.+|++..-..+.|+++++++-+++.-+
T Consensus 328 kGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 328 SGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred cCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 554 46799999889999999999998887655
No 369
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.26 E-value=7.2e-10 Score=113.65 Aligned_cols=275 Identities=15% Similarity=0.075 Sum_probs=166.2
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
..++...+++++|.+ ++-++.++|.+.+.++...+ ..+| ++++|++.+..|..............+
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~----~~~~---~~~~vlv~~~~hP~~~~v~~t~a~~~G----- 190 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR----VSKS---KSNRFFVDDDVHPQTLDVLRTRAEPLG----- 190 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh----hccC---CCCEEEEcCccCHHHHHHHHHHHHhCC-----
Confidence 445677788888876 67889999999997777664 2222 128999998887544333222211111
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~ 180 (374)
..++.++.++ +++ ++.+.++ +..+.+.+|.+.+ +++|.++||++|+++++|..+..++.. .
T Consensus 191 ----~ev~~~~~~~--d~~------~~~~~~v-lvq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l-~- 251 (954)
T PRK05367 191 ----IEVVVGDAAK--ALD------HDDVFGV-LLQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALTLL-T- 251 (954)
T ss_pred ----CEEEEecCcc--CCC------cccEEEE-EEecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCC-C-
Confidence 2233344322 111 2356555 4455677898888 999999999999999999866322110 0
Q ss_pred cccccCCCCCcEEEec--cc---cc-CCccchhhheeCHHHHhhcCCCCCC----------CC-----------C---CC
Q 017259 181 LASDWEEVRPDMVILG--KA---LG-GGVIPVSAVLADKEVMLCIQPGEHG----------ST-----------F---GG 230 (374)
Q Consensus 181 ~~~~~~~~~~d~~s~s--K~---~~-~G~~~~G~~~~~~~~~~~~~~~~~~----------~~-----------~---~~ 230 (374)
..-++..|++..+ |. ++ ||- ..|++..++++...+.+...+ .. + ..
T Consensus 252 ---~pge~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTs 327 (954)
T PRK05367 252 ---PPGEMGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATS 327 (954)
T ss_pred ---ChhhcCCCEEEeeCcccCCCCCCCCC-CEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccccc
Confidence 1123456776443 43 22 344 467888888877666432111 00 0 10
Q ss_pred C---HHHHHHHHHH--HHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHH
Q 017259 231 N---PLASAVAIAS--LDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 231 ~---~~~~~aa~~a--l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
| ..++.+++++ +..+... ++.+++..+..++.++|+..+.. ... ......+.+.++ . +..++
T Consensus 328 Nict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~---~~~--~~~f~~~~~~~~--~---~~~~i 397 (954)
T PRK05367 328 NICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLE---VVH--DSFFDTLTVEVG--G---DAAAV 397 (954)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcc---cCC--CCCCCeEEEeCC--C---CHHHH
Confidence 1 1122223322 2333333 45667777888888888664322 111 111122233332 1 57899
Q ss_pred HHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 303 CLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 303 ~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
.++|.++||.++....+.+|++++..+|++|++.+++.|.
T Consensus 398 ~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 398 LARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 9999999999977667889999999999999999999997
No 370
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.23 E-value=5.9e-09 Score=98.86 Aligned_cols=296 Identities=11% Similarity=0.071 Sum_probs=157.5
Q ss_pred CCcHHHHHHHHhcccCCCeEEe-cCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC-Ccccc
Q 017259 20 NDKFPVFAERLTSMFGYDMVLP-MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC-DNEAI 97 (374)
Q Consensus 20 ~~~~~~l~~~l~~~~~~~~~~~-~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~-~~~~~ 97 (374)
.....+..+..++.+|.++.+| ++|.|.|+..++.++ ..+| |.|++.+++ |-+....+.+++ .|.+.
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~-----~~~G-----D~VLvdRN~-HKSi~~glilaGa~Pvyl 137 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAV-----LTPG-----DKVLVDRNC-HKSIHHGLILAGATPVYL 137 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhh-----cCCC-----CEEEecCCc-cHHHHHHHHHcCCceEEe
Confidence 4456677777888889997655 555555555555555 6788 999999999 555444444444 34443
Q ss_pred ccCCCCCCCceeccCCCHHHHHHHHHhcCCc-EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC-c
Q 017259 98 RGFGPLLPGHLKVDFGDITALEKIFKESGDQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL-A 175 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~-~ 175 (374)
..... +..-.+---+.+.+++++.+++.. ..+++.+|.+ .|.... +++|.+.++++++++..||+|.-+ .
T Consensus 138 ~p~~n--p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~ 209 (557)
T COG1982 138 EPSRN--PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFD 209 (557)
T ss_pred cCCCC--ccccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCccccc
Confidence 22111 101111111689999998887665 6666666644 388887 999999999999999999999732 2
Q ss_pred ccccCcccccCCCCCcEEEec--ccccCCccchhhheeC-------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017259 176 RSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLAD-------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR 246 (374)
Q Consensus 176 ~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~ 246 (374)
..+.. .-.......++++-| |.+++.- ....+..+ +++.+.+. ..++-+++-+.+++.-. -+.+.
T Consensus 210 ~~~~l-~~~~~~~~~~~~tqS~HK~l~alS-QaS~iHv~~~~~~~~~r~nea~~---~h~STSPsY~l~ASlD~-Ar~~~ 283 (557)
T COG1982 210 FSPML-PESALNGGADFVTQSTHKLLAALS-QASMIHVKDGRAVNHERFNEALM---MHQSTSPSYPLMASLDV-ARMQE 283 (557)
T ss_pred ccccC-cchhhhcCceEEEechhhhhhhhh-hhHHHhhCCCccCCHHHHHHHHH---HHccCCchHHHHHHHHH-HHHhh
Confidence 22221 112222345677777 5555332 33444444 23333333 22333444444444443 23222
Q ss_pred hh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEE---------------------EeeeEEEEeccCCCchhHHHH
Q 017259 247 DE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG---------------------RGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 247 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------------~g~~~~~~~~~~~~~~~~~~~ 302 (374)
.. ...+..-+..-.+++.+.+....++++....++ .+.-+.+..+ ..|..+..+
T Consensus 284 ~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp--~~Gipg~~v 361 (557)
T COG1982 284 GNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP--EFGIPGAIV 361 (557)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecC--CCCCcHHHH
Confidence 21 221111222222333333332222211111111 0111111111 225678999
Q ss_pred HHHHHHCCeEeccCCCCEE--EEecCCCCCHHHHHHHHHHHH
Q 017259 303 CLKMKERGILAKPTHDTIV--RLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 303 ~~~l~~~Gi~v~~~~~~~l--Ri~~~~~~~~e~i~~~~~~l~ 342 (374)
.++|.++|++...++...+ -+++........++.+++.++
T Consensus 362 ~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 362 AKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 9999999999877654433 333332334455555555554
No 371
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.17 E-value=1.8e-09 Score=100.66 Aligned_cols=225 Identities=22% Similarity=0.207 Sum_probs=122.9
Q ss_pred HHHHHhcccCCC---------eEEecCChHHHHHHHHHHHHHcccc---cccCCCCccEEEEeccCCCCcccccccccCC
Q 017259 26 FAERLTSMFGYD---------MVLPMNTGAEGVETALKLARKWGYV---KKKFSIDEAIIVSCCGCFHGRTLAAISMSCD 93 (374)
Q Consensus 26 l~~~l~~~~~~~---------~~~~~~~gs~a~~~al~~~~~~~~~---~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~ 93 (374)
+.++|++++|.+ .-++|+|||+++..|+.+++..... ..|.....+-+++.+..-|-....+..+.+-
T Consensus 84 vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGl 163 (373)
T PF00282_consen 84 VIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGL 163 (373)
T ss_dssp HHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTS
T ss_pred HHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeee
Confidence 445555555655 4689999999999999988765311 1221101133444444346665555555553
Q ss_pred ccccccCCCCCCCceeccCC-----CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEE
Q 017259 94 NEAIRGFGPLLPGHLKVDFG-----DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM 165 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~l 165 (374)
+ +..++.+ |+++|+++|.+. +..+-+|+.+-....+|.+-+ +++|.++|+++++++
T Consensus 164 g------------~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 164 G------------VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYNIWL 227 (373)
T ss_dssp E------------EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT-EE
T ss_pred E------------EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccceee
Confidence 3 2222222 789999988752 122445555556666788888 999999999999999
Q ss_pred EEeccccCCcccccCcccccCCC-CCcEEEec--ccccCCccchhhheeCHH--HHhhcC--CCCCC-------------
Q 017259 166 IADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQ--PGEHG------------- 225 (374)
Q Consensus 166 i~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~~~--~~~~~~--~~~~~------------- 225 (374)
++|.+++|....-+.+.....++ ..|-++++ |.++..+ +.|+++.+++ +...+. .....
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~-~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPY-GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SS-S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred eecccccccccccccccccccccccccccccchhhhhcCCc-cceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 99999997311111111111122 23445444 8888777 8888777653 222221 00011
Q ss_pred -CCCCCC-HHHHHHHHHHHHHHhhhcHHHHHHHH---HHHHHHHHHH
Q 017259 226 -STFGGN-PLASAVAIASLDVIRDEKLAERSAHL---GEELRQHLFK 267 (374)
Q Consensus 226 -~~~~~~-~~~~~aa~~al~~~~~~~~~~~~~~~---~~~~~~~l~~ 267 (374)
.++..+ .+.....+..++.+..+++.+++++. .+++.++|++
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112222 34455667777777666665555554 4444444433
No 372
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.15 E-value=4.5e-08 Score=86.55 Aligned_cols=321 Identities=16% Similarity=0.171 Sum_probs=186.6
Q ss_pred CCCCcHHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcccc
Q 017259 18 FYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAI 97 (374)
Q Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 97 (374)
..+..+..|++...+.+|++.++.|.-|-.|-+..+..+.+.+-..+| .+.++++..|+-.+.+-+...+ ...+
T Consensus 76 agsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg-----~~~~~~sN~~FdTTr~h~~~ng-~~~~ 149 (471)
T COG3033 76 AGSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPG-----SKMVAFSNYHFDTTRGHIQING-ATPR 149 (471)
T ss_pred cccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCC-----ccccccccceecchhHHHHhcC-Cccc
Confidence 347788899999999999999999999998888888888655444455 6666666554332332222221 1111
Q ss_pred ccCCCCCCCce-eccCC---CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 98 RGFGPLLPGHL-KVDFG---DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 98 ~~~~~~~~~~~-~~~~~---d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
..+.+.-.+-. ..|+- |++.|++.|++-+ +++..|++.-.+|+-|+-.-|-.-++++.++|++|||+++.|.+..
T Consensus 150 n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rf 229 (471)
T COG3033 150 NVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARF 229 (471)
T ss_pred cccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhh
Confidence 11111111111 22332 8999999999755 4565555555566656666688999999999999999999998753
Q ss_pred -C---Cccccc----Ccccc-----cCCCCCcEEEec-ccccCCccchhh-heeCHH----HHhhcCCC----CCCCCCC
Q 017259 173 -G---LARSGR----MLASD-----WEEVRPDMVILG-KALGGGVIPVSA-VLADKE----VMLCIQPG----EHGSTFG 229 (374)
Q Consensus 173 -~---~~~~g~----~~~~~-----~~~~~~d~~s~s-K~~~~G~~~~G~-~~~~~~----~~~~~~~~----~~~~~~~ 229 (374)
+ |...-+ .+++. .+ -+.|..++| |-= |++.+|. +..+++ +...++.. ....+|+
T Consensus 230 aENaYFIk~rE~gYrd~sI~~IarEm~-sYaD~~~mS~KKD--~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG 306 (471)
T COG3033 230 AENAYFIKQREPGYRDWSIEEIAREMY-SYADGCTMSAKKD--GLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG 306 (471)
T ss_pred hhhhhhhhhcCcccccccHHHHHHHHH-hhhhhheeecccc--ceeccccEEEecCccHHHHHHHHHhheEeeccccccC
Confidence 1 111100 11111 01 134555565 311 2225554 445544 44444432 1223443
Q ss_pred C-CHHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEe----ccCCC-chhHHHHH
Q 017259 230 G-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DKTAL-PVSAYDIC 303 (374)
Q Consensus 230 ~-~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-~~~~~~~~ 303 (374)
+ +.=.+.+....|...-+.++.++.-...+++.+.|.+. +++...+..|+-+.++. |.-+. .-.++.++
T Consensus 307 gl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~-----GVpi~~paGGHavfvda~~~lphip~eqFpaqala 381 (471)
T COG3033 307 GLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA-----GVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALA 381 (471)
T ss_pred cccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc-----CCeeEecCCCceEEeehhhhcCCCChhhCcHHHHH
Confidence 2 22333344444554445577888888888898888876 34322333344444442 21110 12355666
Q ss_pred HHHH-HCCeEeccC-----------------CCCEEEEecCC-CCCHHHHHHHHHHHHHHHhccCCcCC
Q 017259 304 LKMK-ERGILAKPT-----------------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMR 353 (374)
Q Consensus 304 ~~l~-~~Gi~v~~~-----------------~~~~lRi~~~~-~~~~e~i~~~~~~l~~~~~~~~~~~~ 353 (374)
-.|- +.||-.... .-..+|++++. +-|.+++|..+++++++.+ .-+++.
T Consensus 382 ~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e-~~~~ik 449 (471)
T COG3033 382 CELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE-NAEDIK 449 (471)
T ss_pred HHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh-ccccCC
Confidence 6664 557655321 13678998764 4589999999999999887 544433
No 373
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.94 E-value=1.4e-07 Score=95.83 Aligned_cols=275 Identities=14% Similarity=0.081 Sum_probs=157.7
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
..++...+++++|.+ ++=+..++|.+.++++++.+ ..++ ++++|++.+..+............
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~----~~~~---~~~~vlv~~~~hP~~~~v~~t~a~-------- 175 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFN----VSKK---KANKFFVAKDLHPQTKSVLHTRAK-------- 175 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHH----hhcC---CCCEEEECCCCCcchHHHHHHHHH--------
Confidence 445777888888887 55778888888887666553 2222 237888887775332211111111
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 180 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~ 180 (374)
+...+++.+ |+++|++.+ .++++++.. .|..|.+.+ +++|.+++|++|.+++++.-...+...-.
T Consensus 176 -~~g~~v~~~---~~~~l~~~~-----~~~~v~~q~-Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~- 240 (939)
T TIGR00461 176 -PFGIEVIVV---DCSDIKKAV-----DVFGCLLQY-PATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTP- 240 (939)
T ss_pred -hcCcEEEEE---cHHHHhhcC-----CEEEEEEEC-CCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCC-
Confidence 111222222 455555444 366665533 355677776 99999999999999998643332211111
Q ss_pred cccccCCCCCcEE-Eeccccc-----CCccchhhheeCHHHHhhcCCCC----------------------------CCC
Q 017259 181 LASDWEEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPGE----------------------------HGS 226 (374)
Q Consensus 181 ~~~~~~~~~~d~~-s~sK~~~-----~G~~~~G~~~~~~~~~~~~~~~~----------------------------~~~ 226 (374)
.-++..|++ ..+|.|| ||- ..|++..++++...+-... ...
T Consensus 241 ----Pge~GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 241 ----PGHYGADIVLGSSQRFGVPMGYGGP-HAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred ----HHHcCCcEEeeCCCccCCCCCCCCC-ceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 112344665 2335443 343 3566777777665543210 001
Q ss_pred CCCCCHHHHHHHHHH--HHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHH
Q 017259 227 TFGGNPLASAVAIAS--LDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 227 ~~~~~~~~~~aa~~a--l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 301 (374)
+.+.+ -++.|.+++ +..+..+ ++-+++..+..++.+.|++.+... + ......-+.+.++.. +..+
T Consensus 316 NICt~-qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~---~--~~~fF~~~~v~~~~~----~~~~ 385 (939)
T TIGR00461 316 NICTA-QVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHEL---I--NKTWFDTLTVKVGNG----ISSE 385 (939)
T ss_pred chhHH-HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---c--CCCccceEEEEeCCC----CHHH
Confidence 11111 122222222 3444444 345566667777777777743221 1 111111122223222 5789
Q ss_pred HHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 302 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
+.+.+.++||.++....+.+++++...+|++|++.+++.+.
T Consensus 386 i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 386 LLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 99999999999988767899999999999999999999985
No 374
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.4e-07 Score=81.77 Aligned_cols=287 Identities=15% Similarity=0.106 Sum_probs=170.5
Q ss_pred eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceec-c-----
Q 017259 38 MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV-D----- 111 (374)
Q Consensus 38 ~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----- 111 (374)
++-+.++-+--+...+..+-+ + .++|-+|+....+|.+...+..+....-+. .+. ..+..+ |
T Consensus 130 EvavmNsLTvNlh~Ll~sFyK-----P--TekR~KILlE~kaFPSDhYAiesQ~~lhG~----~~e-~sm~~iePREGEe 197 (465)
T KOG3846|consen 130 EVAVMNSLTVNLHSLLISFYK-----P--TEKRFKILLEKKAFPSDHYAIESQCKLHGI----SPE-NSMIQIEPREGEE 197 (465)
T ss_pred hhhhHhhhhhHHHHHHHHhcC-----C--cchhhhhhhccCCCCchHHHHHhhhhhcCC----ChH-HheEEeccccccc
Confidence 455566665444444444422 2 234578898888887766555433221111 010 001111 1
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCCCCc
Q 017259 112 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 191 (374)
Q Consensus 112 ~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d 191 (374)
.-..+++-+.|+++++.++.++++.++..+|...+ +.+|...-+..|+++-+|-+|+ ++ .-++-...|+++.-
T Consensus 198 tlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vg--NVpL~LHdWgVDFA 270 (465)
T KOG3846|consen 198 TLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VG--NVPLQLHDWGVDFA 270 (465)
T ss_pred chhHHHHHHHHHhcCCeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hc--CCceEEeecCCceE
Confidence 11467787888888899999999999999999998 9999988888999999999997 21 11222233444333
Q ss_pred EEEecccccCCccchhhheeCHHHHhhcCCC------------------------CCCCCC-CCCHHHHHHHHHHHHHHh
Q 017259 192 MVILGKALGGGVIPVSAVLADKEVMLCIQPG------------------------EHGSTF-GGNPLASAVAIASLDVIR 246 (374)
Q Consensus 192 ~~s~sK~~~~G~~~~G~~~~~~~~~~~~~~~------------------------~~~~~~-~~~~~~~~aa~~al~~~~ 246 (374)
..+.-|-+.+|.-++|.+...++......+. ..+... .++....++.+++|+...
T Consensus 271 CWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~ 350 (465)
T KOG3846|consen 271 CWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFA 350 (465)
T ss_pred EEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHH
Confidence 3344476654332566666655443332211 112222 335555666777777654
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHHhCCCcee---------------eEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCe
Q 017259 247 DEKLAERSAHLGEELRQHLFKIQQQFPNYVK---------------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 311 (374)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 311 (374)
.-. ...++++.-.+...|+.+....-+... .++.+|--..+.++. ....+.+.|.++|+
T Consensus 351 q~~-~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-----p~~~vfqeL~krGv 424 (465)
T KOG3846|consen 351 QFN-INELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-----PTPKVFQELHKRGV 424 (465)
T ss_pred Hhh-HHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-----CchHHHHHHHHcCe
Confidence 422 344444444444433333211101110 122223333333332 35789999999999
Q ss_pred EeccCCCCEEEEec-CCCCCHHHHHHHHHHHHHHHhccCC
Q 017259 312 LAKPTHDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP 350 (374)
Q Consensus 312 ~v~~~~~~~lRi~~-~~~~~~e~i~~~~~~l~~~~~~~~~ 350 (374)
++....++.||++| ++.++-.|+..+++.|.++++ .++
T Consensus 425 ~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d-~~e 463 (465)
T KOG3846|consen 425 IGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMD-KLE 463 (465)
T ss_pred eccccCCCceEeecchhhccHHHHHHHHHHHHHHHH-Hhh
Confidence 99988899999987 688999999999999999988 653
No 375
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.93 E-value=9.3e-10 Score=98.99 Aligned_cols=196 Identities=18% Similarity=0.190 Sum_probs=56.5
Q ss_pred HHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCC---Cc--ccccccccCCcccc
Q 017259 23 FPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFH---GR--TLAAISMSCDNEAI 97 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yh---g~--~~~~~~~~~~~~~~ 97 (374)
+..+++.+++.+|++.+++++|...|+.+++..+. +| .+||+..+.-- |. ....+..++.--
T Consensus 49 ~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la------~~-----~EvIvsRGelVeiGgsFRip~vm~~sGa~l-- 115 (367)
T PF03841_consen 49 YAHVEELLCELTGAEAALVVNNNAAAVLLALNTLA------KG-----KEVIVSRGELVEIGGSFRIPDVMRQSGARL-- 115 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc------cc-----cccccccccccccccccccccccccccccc--
Confidence 45577888888999999999999999998887763 34 67877766431 11 111111111000
Q ss_pred ccCCCCCCCceeccC--CCHHHHHHHHHhcCCcEEEEEEccccCC--CCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 98 RGFGPLLPGHLKVDF--GDITALEKIFKESGDQIAGFLFEPIQGE--AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~--~d~~~le~~l~~~~~~~~~vi~~~~~~~--~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
++.-.. ..+++.+++|. ++|++++-.+.+|. .|.. ..-.++++.+++++|++++|+|-.-+.
T Consensus 116 ---------vEVGttN~t~~~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt--~~~~~~el~~la~~~~lp~i~DlgsG~ 181 (367)
T PF03841_consen 116 ---------VEVGTTNRTHLSDYEKAIT---ENTAALLKVHTSNFRIQGFT--GEVSLEELAELAKEHGLPVIVDLGSGL 181 (367)
T ss_dssp -----------------------------------------------------------HHHHHHHHHT--EEEE-TTHH
T ss_pred ---------ccccccccccccccccccc---cccccccccccccccccccc--ccccHHHHHHHHhhcCCcEEEECCCCC
Confidence 111111 14778899998 67888766554333 1111 222399999999999999999977531
Q ss_pred ------CcccccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017259 174 ------LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI 245 (374)
Q Consensus 174 ------~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~ 245 (374)
++..+++.........+|+++|| |-++|.- .|.+++.++++++++.......+-..-+.+++..++++..
T Consensus 182 l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y 259 (367)
T PF03841_consen 182 LVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLY 259 (367)
T ss_dssp HHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH-
T ss_pred CcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHH
Confidence 22233343334455678999999 7787653 5789999999999876444555566778888888888875
Q ss_pred hh
Q 017259 246 RD 247 (374)
Q Consensus 246 ~~ 247 (374)
.+
T Consensus 260 ~~ 261 (367)
T PF03841_consen 260 LD 261 (367)
T ss_dssp --
T ss_pred HH
Confidence 43
No 376
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.93 E-value=5.3e-08 Score=86.91 Aligned_cols=185 Identities=16% Similarity=0.160 Sum_probs=108.5
Q ss_pred cCcCCC-CCcHHHHHHHHhcccCCCeEEe---cCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccc
Q 017259 14 SSRAFY-NDKFPVFAERLTSMFGYDMVLP---MNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAIS 89 (374)
Q Consensus 14 ~~~~~~-~~~~~~l~~~l~~~~~~~~~~~---~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~ 89 (374)
++++++ +..++.|++-.++.++.|..++ .-|||+|+..+|..+ ..+| |+++...+.=.-.....+.
T Consensus 46 tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~-----LrpG-----D~ll~~tG~PYDTL~~VIG 115 (403)
T PF06838_consen 46 TTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGV-----LRPG-----DELLSITGKPYDTLEEVIG 115 (403)
T ss_dssp --TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH-------TT------EEEESSSS--CCHHHHHT
T ss_pred CCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhc-----CCCC-----CeEEEcCCCchhhHHHHhC
Confidence 334444 4446669999999999998776 457999999999988 5667 9998776542112222222
Q ss_pred ccCC--ccccccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--
Q 017259 90 MSCD--NEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-- 160 (374)
Q Consensus 90 ~~~~--~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~-- 160 (374)
+.++ .+.. .+......++.. |.+.++++++ ++++++++--.-+..-.--.+-+.++++.+++|+
T Consensus 116 ~~g~~~GSL~----e~Gi~Y~~v~L~~dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~ 188 (403)
T PF06838_consen 116 IRGNGPGSLK----EFGIKYREVPLTEDGTIDWEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEIN 188 (403)
T ss_dssp SSSSSSSSTG----GGT-EEEE--B-TTSSB-HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-
T ss_pred CCCCCCCChH----HhCceeEEEeecCCCCcCHHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhC
Confidence 2221 1111 111111122221 7899999998 6899998875433322222366778888888877
Q ss_pred cCCEEEEeccccCCcccccCcccccCCCCCcEE--EecccccCCccchh-hheeCHHHHhhcC
Q 017259 161 YNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVS-AVLADKEVMLCIQ 220 (374)
Q Consensus 161 ~~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G-~~~~~~~~~~~~~ 220 (374)
-++++.+|++|++|...-++. .+..|++ |+-|..|||+++.| |+++++++.+...
T Consensus 189 p~~iifVDNCYGEFvE~~EP~-----~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 189 PDVIIFVDNCYGEFVETQEPT-----EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp TTSEEEEE-TTTTTTSSS-GG-----GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred CCeEEEEeCCcceeccccCcc-----ccchhheeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 478999999999885444432 2456766 77799999987776 5889999888764
No 377
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.91 E-value=8.8e-08 Score=87.12 Aligned_cols=195 Identities=16% Similarity=0.148 Sum_probs=124.2
Q ss_pred HHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC----CCCcccccccccCCccccc
Q 017259 23 FPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC----FHGRTLAAISMSCDNEAIR 98 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~----yhg~~~~~~~~~~~~~~~~ 98 (374)
...+++.++..++.+.++.+++.+.|+..++..+. + + .++++..+. +|.......-.++.. +.
T Consensus 70 ~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~-----~-~-----~EvVis~g~lV~gg~~~v~d~~~~aG~~-l~- 136 (395)
T COG1921 70 LTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALA-----E-G-----KEVVVSRGELVEGGAFRVPDIIRLAGAK-LV- 136 (395)
T ss_pred HHHHHHHHhcccchhheeeECCcHHHHHHHHhhhc-----c-C-----CeEEEEccccccCCCCChhHHHHHcCCE-EE-
Confidence 33577777777788999999999999988877663 2 2 566665432 222222222222210 00
Q ss_pred cCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEcccc--CCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcc
Q 017259 99 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQ--GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 176 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~--~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~ 176 (374)
.+-........+++.+|+ +++++++=...+ +-++.+ + .+++.++||+||+++|+|.+-+...+
T Consensus 137 -------EvG~tn~t~~~d~~~AIn---e~ta~llkV~s~~~~f~~~l-~----~~~l~~ia~~~~lpvivD~aSg~~v~ 201 (395)
T COG1921 137 -------EVGTTNRTHLKDYELAIN---ENTALLLKVHSSNYGFTGML-S----EEELVEIAHEKGLPVIVDLASGALVD 201 (395)
T ss_pred -------EecccCcCCHHHHHHHhc---cCCeeEEEEeeccccccccc-c----HHHHHHHHHHcCCCEEEecCCccccc
Confidence 011111125788999998 455554443332 333433 3 89999999999999999998754322
Q ss_pred cccCcccccCCCCCcEEEec--ccccCCccchhhheeCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 017259 177 SGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 248 (374)
Q Consensus 177 ~g~~~~~~~~~~~~d~~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~ 248 (374)
..+-.-......+|+++|| |-|+|. +-|.+++++++++.++.......+-.....+++..++|+.+...
T Consensus 202 -~e~~l~~~la~GaDLV~~SgdKllgGP--qaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 202 -KEPDLREALALGADLVSFSGDKLLGGP--QAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred -cccchhHHHhcCCCEEEEecchhcCCC--ccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 1111112334578999998 777654 56779999999999987655555556777888888888887664
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.86 E-value=2.2e-07 Score=84.51 Aligned_cols=225 Identities=14% Similarity=0.107 Sum_probs=130.8
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCccc--ccCc--ccccCCCC
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS--GRML--ASDWEEVR 189 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~--g~~~--~~~~~~~~ 189 (374)
|.+++|+++++.++...+.+++++....+... +.+++|+++|++|||+.|+..||+ ..-. -... +. ..|..
T Consensus 140 d~~~ie~~i~~~G~~~iLcvltttscfapr~~---D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~-~~GRv 214 (389)
T PF05889_consen 140 DLEAIEAKIEELGADNILCVLTTTSCFAPRLP---DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAW-RVGRV 214 (389)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHH-HHSTC
T ss_pred cHHHHHHHHHHhCCCCeEEEEEecCccCCCCC---ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHH-hcCCc
Confidence 68899999987766667777777766666543 459999999999999999999996 2000 0000 00 11222
Q ss_pred C-cEEEecccccCCccchhhhee-CHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHHH
Q 017259 190 P-DMVILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL 265 (374)
Q Consensus 190 ~-d~~s~sK~~~~G~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~~~~l 265 (374)
+ ++-+..|.|--|. +.+.+.+ .+..+..+....-+-.+ ..+..-.....+.+... .......++...++.++|
T Consensus 215 da~vqS~dkNF~VPv-Ggai~As~~~~~i~~vs~~YpGRas--~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl 291 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPV-GGAIMASFDPSGILAVSKEYPGRAS--ASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERL 291 (389)
T ss_dssp SEEEEEHHHHHCEES-SHEEEEESSHHHHHHHHHTSHSHBT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEecC-CCcEEEecCHHHHHHHHHHhhhhhh--cccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 2 2336667765221 1112333 34555555532111111 22222333333332221 256777788899999999
Q ss_pred HHHHHhCCCceeeEEEEeeeEEEEeccCCC--chhHHHHHHHHHHCCe---E-eccCC-----------CCEEEEecCCC
Q 017259 266 FKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGI---L-AKPTH-----------DTIVRLTPPLS 328 (374)
Q Consensus 266 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi---~-v~~~~-----------~~~lRi~~~~~ 328 (374)
+++..+....+...+.....+.+.++.... ......|...|..+|| - +.+.. -.+|-++..+.
T Consensus 292 ~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG 371 (389)
T PF05889_consen 292 KKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIG 371 (389)
T ss_dssp HHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT
T ss_pred HHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhC
Confidence 999877644455555566667777653321 1246789999999865 2 33321 26788877788
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 017259 329 ISSNELQEGSKALHDVLE 346 (374)
Q Consensus 329 ~~~e~i~~~~~~l~~~~~ 346 (374)
.++||++.++++|+++++
T Consensus 372 ~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 372 MTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 999999999999999875
No 379
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.83 E-value=5.1e-08 Score=86.39 Aligned_cols=281 Identities=12% Similarity=0.079 Sum_probs=149.5
Q ss_pred CcHHHHHHHHhccc--------CCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccC
Q 017259 21 DKFPVFAERLTSMF--------GYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSC 92 (374)
Q Consensus 21 ~~~~~l~~~l~~~~--------~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~ 92 (374)
-.-.+|++.+.++. .-..+++.+|+++.+++|+-++.... ...+ ..-+|+...|.|..+.....-+..
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~-~~~~---~p~~VVa~aPYY~~Y~~qt~~f~s 118 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNA-SPSS---SPASVVAAAPYYSSYPEQTDFFDS 118 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT--TTS---SSEEEEE-SS--CHHHHHCCCT-B
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCC-CCCC---CCceeEecCCCccchHHHHHhccc
Confidence 34556777777754 23479999999999999998884321 1122 237899999988544322211110
Q ss_pred CccccccCCCCCCCceeccCCCHHHHHHHHHh-cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 93 DNEAIRGFGPLLPGHLKVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
..+ .+.. |..... +. .+....=+ +.+++||.|.+. + .+++.-+..+|.|-+|
T Consensus 119 -~~y---------~w~G----da~~~~---~~~~~~~~IEl-VTSPNNPDG~lr------~---~V~~g~~~k~I~D~AY 171 (363)
T PF04864_consen 119 -RLY---------KWAG----DASNFK---NSDNPSPYIEL-VTSPNNPDGQLR------E---AVLNGSSGKVIHDLAY 171 (363)
T ss_dssp -TTE---------EEEE----ECCCGT---T-S-CCGEEEE-EESS-TTT---------------SSTTTEEEEEEE-TT
T ss_pred -cCc---------cccc----cHHhhc---cCCCCCCeEEE-EeCCCCCccccc------c---hhcCCCCcceeeeeee
Confidence 000 0111 111111 11 11233333 445567777653 1 2335667778999999
Q ss_pred cCCcccccCcccccCCCCCcEE--Eeccccc-CCccchhhheeC-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 017259 172 SGLARSGRMLASDWEEVRPDMV--ILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD 247 (374)
Q Consensus 172 ~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~ 247 (374)
-..-++ +.. ...+-|+. |+||.-| +|. |+||.+.. +++.+++.......|.+.+-=+|.=+...|+.+-+
T Consensus 172 YWPhyT--pI~---~~aD~DiMLFT~SK~TGHAGS-R~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~ 245 (363)
T PF04864_consen 172 YWPHYT--PIT---APADHDIMLFTLSKLTGHAGS-RFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLD 245 (363)
T ss_dssp -STTTS--------S-B--SEEEEEHHHHCS-GGG--EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHH
T ss_pred eccccc--ccC---CCCCCceEEEEEecccCcccc-ccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHh
Confidence 643111 111 11234554 8899888 798 99997765 56777776554455666666666655555555433
Q ss_pred h--------cHHHHHHHHHHHHHHHHHHHHHhC-----CCc-------e-eeEEEEeeeEEEEeccCCCchhHHHHHHHH
Q 017259 248 E--------KLAERSAHLGEELRQHLFKIQQQF-----PNY-------V-KEVRGRGLFNAVEFDKTALPVSAYDICLKM 306 (374)
Q Consensus 248 ~--------~~~~~~~~~~~~~~~~l~~~~~~~-----~~~-------~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 306 (374)
. ++.+--++.-+...++|+++...- |.+ . ....+.+.|.|+.+..+ ...+..+.|
T Consensus 246 ~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e----ed~DC~~~l 321 (363)
T PF04864_consen 246 GYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE----EDEDCYAVL 321 (363)
T ss_dssp HCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC----GGSSHHHHH
T ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc----ccccHHHHH
Confidence 1 244444444444555555554221 100 0 12345688899887644 235677788
Q ss_pred HHCCeEeccC-----CCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 307 KERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 307 ~~~Gi~v~~~-----~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
++.||+.+.+ +..++|++ ...++++.+.++++|..+
T Consensus 322 ~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 322 REAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp HCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHHHHHCC
T ss_pred HhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHHHHHhh
Confidence 8889999875 47899999 778999999999998753
No 380
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.79 E-value=6.7e-07 Score=83.32 Aligned_cols=277 Identities=16% Similarity=0.162 Sum_probs=138.2
Q ss_pred HHHHHHHHhcccCCCe--EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYDM--VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~~--~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
.-++...+++++|.+- +=...+++.+-++++++.+.. +. ++++|++.... |+.+.........
T Consensus 112 lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~----~~---~~~~vlv~~~~-hP~~~~v~~t~a~------- 176 (429)
T PF02347_consen 112 LFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRAT----KR---KRNKVLVPESL-HPQTRAVLRTYAA------- 176 (429)
T ss_dssp HHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHH----TT------EEEEETTS--CHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhc----cc---CCcEEEEcCCc-ChhhHHHHHHhhh-------
Confidence 4578889999999985 366778888888877776632 11 13678887776 4443332211111
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCccccc
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGR 179 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~ 179 (374)
+...+++.+++++-...+ +++++++++..++ ..|.+.+ +++|.+++|++|.++|+ .+-- .++-.-.
T Consensus 177 -~~g~~iv~~~~~~~~~~d------~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~~ 243 (429)
T PF02347_consen 177 -PLGIEIVEVPLDEDGTTD------DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GADPNALGGLKS 243 (429)
T ss_dssp -HCCEEEEEE-BBTTCSB-------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC--
T ss_pred -hCCeEEEEecccccCCcc------ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcCC
Confidence 111223334432111101 3689999887664 4576665 99999999999999986 3211 1110001
Q ss_pred CcccccCCCCCcEE-Eeccccc-----CCccchhhheeCHHHHhhcCCC----------------------------CCC
Q 017259 180 MLASDWEEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPG----------------------------EHG 225 (374)
Q Consensus 180 ~~~~~~~~~~~d~~-s~sK~~~-----~G~~~~G~~~~~~~~~~~~~~~----------------------------~~~ 225 (374)
+ . .+..|++ -.+|.|| ||- ..|++.+++++...+-.. +..
T Consensus 244 P---g--e~GADI~vg~~Q~fg~p~~~GGP-~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 244 P---G--EYGADIVVGEHQTFGIPMGFGGP-GAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp G---G--GGT-SEEEECCTTTT---CCC-S---EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred h---h--hcCccEEeeCCCCCcccCCCCCC-CeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 1 1 2345766 2346555 344 567778888866554211 111
Q ss_pred CCCCCCH-HHHHHHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHH
Q 017259 226 STFGGNP-LASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 301 (374)
Q Consensus 226 ~~~~~~~-~~~~aa~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 301 (374)
.+++.+. +...++..-+..+..+ ++-++...+..++.++|++. ... ... ...|+-+.+..... ....+
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~---~~~---~~~f~e~v~~~~~~-~~~~~ 389 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGL---PFD---NPFFFEFVVVFSKD-KEVEE 389 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBE---CSS---SSSBSSEEEEESS--HHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCc---ccC---CCCceeeeeecCCc-HHHHH
Confidence 2233332 3222334445555554 44566666777777777665 111 111 11222222211110 13445
Q ss_pred HHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHH
Q 017259 302 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 341 (374)
Q Consensus 302 ~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l 341 (374)
+.+.+...|+.......+.+-+++....|++|+|.+++.|
T Consensus 390 l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 390 LLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 6677777787766656679999999999999999999865
No 381
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.79 E-value=4.5e-07 Score=83.09 Aligned_cols=295 Identities=16% Similarity=0.160 Sum_probs=161.1
Q ss_pred HHHHHhcccCCC--e-EEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCC
Q 017259 26 FAERLTSMFGYD--M-VLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGP 102 (374)
Q Consensus 26 l~~~l~~~~~~~--~-~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 102 (374)
+-..++.+++.. . -.-|+|+|+++..+.+..+.+....+|. ...+++++... |.....+... ..
T Consensus 125 ~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I--~~p~iv~~~~v-~~a~eK~a~y---f~------- 191 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI--DKPNIVTPQNV-HAAFEKAARY---FE------- 191 (491)
T ss_pred HHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC--CCccccchHHH-HHHHHHHHhh---EE-------
Confidence 444444444222 2 2668889999888888777664333442 33455544333 2211111100 00
Q ss_pred CCCCceeccCC------CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-cCCEEEEeccccCCc
Q 017259 103 LLPGHLKVDFG------DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLA 175 (374)
Q Consensus 103 ~~~~~~~~~~~------d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~-~~i~li~Dea~~~~~ 175 (374)
..+..++++ |+..+.+.++ ++|..++.+-++-++|.+-+ +++|.++.-+ +++++.+|.+-+||.
T Consensus 192 --v~l~~V~~~~~~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi 262 (491)
T KOG1383|consen 192 --VELREVPLDEGDYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFI 262 (491)
T ss_pred --EEEEeeeccccceEecHHHHHHHhc---cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCcccc
Confidence 112233332 6777777777 68999999999899998887 9999999999 999999999998874
Q ss_pred cc-ccCcccccCCC-CCcEEEec----c-cccCCccchhhheeC-HHH-HhhcC--C---CC--CCCCCCC--CHHHHHH
Q 017259 176 RS-GRMLASDWEEV-RPDMVILG----K-ALGGGVIPVSAVLAD-KEV-MLCIQ--P---GE--HGSTFGG--NPLASAV 237 (374)
Q Consensus 176 ~~-g~~~~~~~~~~-~~d~~s~s----K-~~~~G~~~~G~~~~~-~~~-~~~~~--~---~~--~~~~~~~--~~~~~~a 237 (374)
-. +.. ....+++ .|-+.|.| | ++.. - +++|++.+ +++ .+.+. . +. ...|..+ +..-.++
T Consensus 263 ~p~~~~-~~~~fdFr~p~V~Sisa~~HKYGl~~-~-G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 263 NPAGYL-NEEEFDFRVPGVTSISADGHKYGLAP-A-GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred cccccc-CccccccCCCCceeEeeccceeeeee-c-CcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHH
Confidence 32 211 1112222 23333333 2 2221 1 33565544 332 22221 0 01 1112222 2223345
Q ss_pred HHHHHHHHhhhcHHH---HHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEec
Q 017259 238 AIASLDVIRDEKLAE---RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 314 (374)
Q Consensus 238 a~~al~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 314 (374)
.++++-.+..+++.+ ++.+....+++.+++.. ++.....+.-.++.+.-.. .+-.++.+.|.+.|..+.
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~----~i~i~gkp~vs~~~~~s~~----~~i~elsd~l~~~GW~ln 411 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIK----GIKIVGKPLVSFILFGSND----VNIFELSDLLRKKGWILN 411 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc----cceecCCCcEEEEEccCCc----cchhhhhHHHHhcCcCcc
Confidence 555555555555554 44455666666666642 2222222333333322221 256789999999998886
Q ss_pred cCC-CCEEEEecCCCCCHHH-HHHHHHHHHHHHhccCCcCCC
Q 017259 315 PTH-DTIVRLTPPLSISSNE-LQEGSKALHDVLELDLPKMRK 354 (374)
Q Consensus 315 ~~~-~~~lRi~~~~~~~~e~-i~~~~~~l~~~~~~~~~~~~~ 354 (374)
... +..+.|+.......++ .++++.-|+++++ ++...+.
T Consensus 412 alq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~-el~~~p~ 452 (491)
T KOG1383|consen 412 ALQFPAAIHICVTRVHAREDVADRFVADIRKVVE-ELKSLPE 452 (491)
T ss_pred ccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHH-HHHhCCC
Confidence 542 3455555445444444 6888888999998 7755543
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.78 E-value=7e-07 Score=80.86 Aligned_cols=303 Identities=15% Similarity=0.120 Sum_probs=161.9
Q ss_pred HHHHHHhcccCCC---eEEecCChHHHHHHHHHHHHHccc---cccc---CCCCccEEEEeccCCCCcccccccccCCcc
Q 017259 25 VFAERLTSMFGYD---MVLPMNTGAEGVETALKLARKWGY---VKKK---FSIDEAIIVSCCGCFHGRTLAAISMSCDNE 95 (374)
Q Consensus 25 ~l~~~l~~~~~~~---~~~~~~~gs~a~~~al~~~~~~~~---~~~G---~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 95 (374)
++-.++.+.-|.+ .-+|++||+-++..++..++...+ ...| .|+ -.+.+.+.+ |-+...+..+.+-+.
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~--lilFtSees-HYSi~kaAa~lg~gt 221 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPP--LILFTSEES-HYSIKKAAAFLGLGT 221 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCc--EEEEecccc-hhhHHHHHHHhccCC
Confidence 3445555554443 568999999999999998874321 1112 221 223333333 444433333333221
Q ss_pred ccccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcE-EEEEEccccCC--CCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 96 AIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQI-AGFLFEPIQGE--AGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~-~~vi~~~~~~~--~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
..+..++.+ ++++||+.|.....+- --++++...+. .|-.-| |+.|+++|++|++++++
T Consensus 222 ---------d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 222 ---------DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHV 288 (510)
T ss_pred ---------ceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEe
Confidence 224444444 6899999988643330 11444444444 366666 99999999999999999
Q ss_pred eccccCCcccccCcccccCCCC-CcEEEec--ccccCCccchhhheeCH-HHHhhcCCCCCC----------CCCCCCHH
Q 017259 168 DEIQSGLARSGRMLASDWEEVR-PDMVILG--KALGGGVIPVSAVLADK-EVMLCIQPGEHG----------STFGGNPL 233 (374)
Q Consensus 168 Dea~~~~~~~g~~~~~~~~~~~-~d~~s~s--K~~~~G~~~~G~~~~~~-~~~~~~~~~~~~----------~~~~~~~~ 233 (374)
|.+++|----.........++. .+-++.+ |-+|.++ +.+.++.+. .+...+.+.... .+|....-
T Consensus 289 DAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gapl-qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK 367 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPL-QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDK 367 (510)
T ss_pred ecccccccccChhhHhhccCccccCceeecHHHhhcCcc-hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccc
Confidence 9999851011111111222332 3444544 7888888 888877664 455555433111 12222222
Q ss_pred HHHHHHH--HHHHH------hhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeE-EEEeeeEEEEeccC-CC-----
Q 017259 234 ASAVAIA--SLDVI------RDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKT-AL----- 295 (374)
Q Consensus 234 ~~~aa~~--al~~~------~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~----- 295 (374)
+...++. .++.+ ..+ ..+++..++.+++.+++++..... .+... +...++..+.++.. ..
T Consensus 368 ~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~--~l~~~~pe~~nv~fw~vp~~lR~~~~~~ 445 (510)
T KOG0629|consen 368 AIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFE--MLFELEPEHVNVCFWYVPPSLRGWQENP 445 (510)
T ss_pred hhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccce--ehhcCCCceEEEeeccCchHhccCcccc
Confidence 2222211 12111 112 345666678888888888765321 22221 11122222222221 00
Q ss_pred ------chhHHHHHHHHHHCCeEe---ccC--CCCEEEEecC-CCCCHHHHHHHHHHHHHHHh
Q 017259 296 ------PVSAYDICLKMKERGILA---KPT--HDTIVRLTPP-LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 296 ------~~~~~~~~~~l~~~Gi~v---~~~--~~~~lRi~~~-~~~~~e~i~~~~~~l~~~~~ 346 (374)
...+..+...++++|... .|. .++++|+..+ .+.+.+|++.+++.|.++-+
T Consensus 446 e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 446 ERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred hhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 112345777888888544 333 2688998543 35688899999998876543
No 383
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.74 E-value=6.7e-06 Score=74.92 Aligned_cols=284 Identities=18% Similarity=0.120 Sum_probs=162.8
Q ss_pred HHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCC
Q 017259 25 VFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGP 102 (374)
Q Consensus 25 ~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 102 (374)
++-..+++++|.+ +.=....+|.+-|+++++.+. .++ +++++++....+........... .+
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~----~k~---k~~~~~V~~~vhpqt~~Vl~Tra---------~~ 187 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRV----TKK---KRNKFLVPKDVHPQTLDVLRTRA---------EG 187 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHh----hcC---cCceEEecCCCCHHHHHHHHhhc---------cc
Confidence 4555666777765 566678888888888877763 222 23888888777543332222221 12
Q ss_pred CCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe-ccccCCcccccCc
Q 017259 103 LLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD-EIQSGLARSGRML 181 (374)
Q Consensus 103 ~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D-ea~~~~~~~g~~~ 181 (374)
....++..+++|+++++++ .+ ..+.++++..++..+....+ +++|.+.+|++|.++++= |..+ ++-...+
T Consensus 188 ~g~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDpla-L~LL~pP- 258 (450)
T COG0403 188 LGIEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLA-LGLLKPP- 258 (450)
T ss_pred CceEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhH-hhccCCc-
Confidence 2244666667788888877 42 47888888776543334444 999999999999877753 2211 1100111
Q ss_pred ccccCCCCCcEE-----Eeccccc-CCccchhhheeCHHHHhhcCCC----------------------------CCCCC
Q 017259 182 ASDWEEVRPDMV-----ILGKALG-GGVIPVSAVLADKEVMLCIQPG----------------------------EHGST 227 (374)
Q Consensus 182 ~~~~~~~~~d~~-----s~sK~~~-~G~~~~G~~~~~~~~~~~~~~~----------------------------~~~~~ 227 (374)
-.+..|++ .|+-.++ ||- -.|++...+++...+-.. +..++
T Consensus 259 ----Ge~GADIvvG~~QrfGvPmgfGGP-hag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSN 333 (450)
T COG0403 259 ----GEFGADIVVGSAQRFGVPMGFGGP-HAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSN 333 (450)
T ss_pred ----cccCCceEEecCcccCCCcCCCCc-ceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchh
Confidence 12344554 2333333 454 567777777765544211 11222
Q ss_pred CCCCHHHHHH-HHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHH
Q 017259 228 FGGNPLASAV-AIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 303 (374)
Q Consensus 228 ~~~~~~~~~a-a~~al~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 303 (374)
.+.+...++. +...+-++..+ ++-+++.+...++.++|++.... +.... ...|--+.+.-+. ....++.
T Consensus 334 ICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g----~~~~~-~~fFdt~~v~~~~--~~~~~l~ 406 (450)
T COG0403 334 ICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAG----VELVF-DHFFDTFTVRVPE--EVAEALL 406 (450)
T ss_pred hhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCc----eEecc-ccceeeEEEecch--hHHHHHH
Confidence 2322222221 11112223333 45566667777777777755311 11111 1222223332210 1567788
Q ss_pred HHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 304 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 304 ~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
+.....|+-++....+.+-++.....++++++.+++.+....
T Consensus 407 ~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 407 AAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred HHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 888888999988877788889888999999999999887543
No 384
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.71 E-value=2.2e-06 Score=84.02 Aligned_cols=234 Identities=16% Similarity=0.115 Sum_probs=130.0
Q ss_pred CcHHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccc----ccc-----------------------------
Q 017259 21 DKFPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYV----KKK----------------------------- 65 (374)
Q Consensus 21 ~~~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~----~~G----------------------------- 65 (374)
..-.++-++|++.+|++ +-.+|+|||+|+..+|.++|..... +.+
T Consensus 123 ~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~ 202 (608)
T TIGR03811 123 QMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAG 202 (608)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccc
Confidence 33445667777777765 4578999999999999999864200 000
Q ss_pred --------------CCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCC-----CHHHHHHHHHh--
Q 017259 66 --------------FSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKE-- 124 (374)
Q Consensus 66 --------------~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~-- 124 (374)
....+--+++.+.+-|-....+..+.+-+. ..+..+|.+ |+++|+++|++
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~---------~~vv~VpvD~~~rmd~~~L~~~I~~~~ 273 (608)
T TIGR03811 203 DQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL---------DQVIPVPVDSNYRMDINELEKIIRKLA 273 (608)
T ss_pred cchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc---------ccEEEeecCCCCcCCHHHHHHHHHHHH
Confidence 000001022223333554444444433211 123444443 79999998874
Q ss_pred -cCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HhcCC--EEEEeccccCCcc---cc---cCccc---------
Q 017259 125 -SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC---SKYNI--LMIADEIQSGLAR---SG---RMLAS--------- 183 (374)
Q Consensus 125 -~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~---~~~~i--~li~Dea~~~~~~---~g---~~~~~--------- 183 (374)
.+..+-+|+..-....+|.+-| +++|.++| +++|+ ++++|.||+|+.. .. .....
T Consensus 274 ~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~ 349 (608)
T TIGR03811 274 AEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAE 349 (608)
T ss_pred hcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccc
Confidence 3334555555555666788888 99999998 77998 6999999998531 01 00000
Q ss_pred -----------------ccCCC-CCcEEEec--ccccCCccchhhheeCH-HHHhhcCC---C----CC-------CCCC
Q 017259 184 -----------------DWEEV-RPDMVILG--KALGGGVIPVSAVLADK-EVMLCIQP---G----EH-------GSTF 228 (374)
Q Consensus 184 -----------------~~~~~-~~d~~s~s--K~~~~G~~~~G~~~~~~-~~~~~~~~---~----~~-------~~~~ 228 (374)
...++ ..|-+++. |.+.-.+ +.|.++.++ ++.+.+.. . .. ..+.
T Consensus 350 ~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py-~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~l 428 (608)
T TIGR03811 350 YGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY-SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYIL 428 (608)
T ss_pred ccccccccccccHhHHHHHhcCcCceEEEeCcccccccCC-CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccce
Confidence 00011 23445554 7666566 677766654 43333321 0 00 0111
Q ss_pred CCC--HHHHHHHHHHHHHH--hhh---cHHHHHHHHHHHHHHHHHHH
Q 017259 229 GGN--PLASAVAIASLDVI--RDE---KLAERSAHLGEELRQHLFKI 268 (374)
Q Consensus 229 ~~~--~~~~~aa~~al~~~--~~~---~~~~~~~~~~~~~~~~l~~~ 268 (374)
.++ ....++.+.+++.+ ..+ ++.++..+..+++.+.|+..
T Consensus 429 egSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 429 EGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223 23356667777776 333 55666667777777777764
No 385
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.33 E-value=0.00012 Score=65.51 Aligned_cols=274 Identities=15% Similarity=0.100 Sum_probs=148.5
Q ss_pred EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCC-----CCcccccccccCCccccccCCCCCCCceecc-CC
Q 017259 40 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCF-----HGRTLAAISMSCDNEAIRGFGPLLPGHLKVD-FG 113 (374)
Q Consensus 40 ~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~y-----hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 113 (374)
+..-|||-|+..+-.++ ++++ ++|...+--- ||+......++..+.+ |..++..+..-. +-
T Consensus 110 VQp~SGSPANfavYtal-----l~Ph-----~RiMGLDLP~GGHLsHGy~T~~kkISa~Siy---FeSmPYkv~~~TG~I 176 (477)
T KOG2467|consen 110 VQPYSGSPANFAVYTAL-----LKPH-----ERIMGLDLPSGGHLSHGYQTPTKKISATSIY---FESMPYKVDPSTGYI 176 (477)
T ss_pred eccCCCCchhhHHHhhh-----cCCC-----CeeeeccCCCCCccccccccCCceeeeeeee---cccCceeeCCCCCce
Confidence 55667888999888888 4555 8887655322 5544443333333322 222211111100 01
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc-CCcccccCcccccCCCCCcE
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM 192 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~-~~~~~g~~~~~~~~~~~~d~ 192 (374)
|-|.||+..... +++++|.-.. ......+ ..++.++|.+.|.+|++|=+|. |+.-.|. ..+.+ -..|+
T Consensus 177 DYD~Le~~A~~f--rPk~iiaG~S--aY~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsPF-ey~Di 245 (477)
T KOG2467|consen 177 DYDKLEKTATLF--RPKLIIAGTS--AYSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGV--IPSPF-EYCDI 245 (477)
T ss_pred ehHHHHHHHHhc--CCcEEEeccc--cchhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCcc-cccce
Confidence 678888776655 4555555322 1223344 8999999999999999999986 5432221 11111 24577
Q ss_pred EEec--ccccCCccchhhheeCHHHHhhcCC-----------C-----CCCCCCCCCHHHHHHHHHHHHHHhhh---cHH
Q 017259 193 VILG--KALGGGVIPVSAVLADKEVMLCIQP-----------G-----EHGSTFGGNPLASAVAIASLDVIRDE---KLA 251 (374)
Q Consensus 193 ~s~s--K~~~~G~~~~G~~~~~~~~~~~~~~-----------~-----~~~~~~~~~~~~~~aa~~al~~~~~~---~~~ 251 (374)
++.. |++-|. |.|.+..++.+...=.. . .-+..-+++--..++...+|++.... .++
T Consensus 246 VTTTTHKsLRGP--Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq 323 (477)
T KOG2467|consen 246 VTTTTHKSLRGP--RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQ 323 (477)
T ss_pred eeccccccccCC--cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHH
Confidence 7544 787754 34445555432211100 0 00111122333444555566665543 567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEE-EeeeEEEEeccCCCchhHHHHHHHHHHCCeEec----c-----CCCCEE
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAK----P-----THDTIV 321 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~-----~~~~~l 321 (374)
+++.++.+.+.+.|...+..+ + +.+ ..+++.+++.... .+...+-+-|-.-+|.+. | ..++.+
T Consensus 324 ~qV~~Nakala~~l~~~Gy~l---v--tgGTDnHlvLvDLr~~G--~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGi 396 (477)
T KOG2467|consen 324 KQVLKNAKALASALISRGYKL---V--TGGTDNHLVLVDLRPKG--VDGARVEKVLELCHIALNKNTVPGDKSALSPGGI 396 (477)
T ss_pred HHHHHHHHHHHHHHHHcCceE---e--cCCccceEEEEeccccC--CchHHHHHHHHHhhhhhcCCcCCCCccccCCCce
Confidence 788888888888887775432 2 222 3466667775432 133222222222234331 1 237889
Q ss_pred EEecCC----CCCHHHHHHHHHHHHHHHh
Q 017259 322 RLTPPL----SISSNELQEGSKALHDVLE 346 (374)
Q Consensus 322 Ri~~~~----~~~~e~i~~~~~~l~~~~~ 346 (374)
||..+. ...++|+++..+-|.++.+
T Consensus 397 RiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 397 RIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 996543 3467888888888877765
No 386
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.28 E-value=7.3e-05 Score=65.37 Aligned_cols=276 Identities=14% Similarity=0.193 Sum_probs=144.3
Q ss_pred EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHH
Q 017259 40 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALE 119 (374)
Q Consensus 40 ~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 119 (374)
+.+-||+-|+..+-..+.... .+..|.+.+|++..+.......+=.......|+. .+-.. -|++.+-
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~--------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd--~~~k~---~d~e~~L 169 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFY--------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWD--AENKC---VDLEGFL 169 (410)
T ss_pred eeeccccchhhhhHHHHHHhc--------ccceeEecCCchhHHHHHHHHcCCceeeeeeeec--CCCce---ecHHHHH
Confidence 667788888888877775432 1267888888875443332222100000011111 11000 1677776
Q ss_pred HHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccC----cccccC-CCCCc-EE
Q 017259 120 KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWE-EVRPD-MV 193 (374)
Q Consensus 120 ~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~----~~~~~~-~~~~d-~~ 193 (374)
..|+..|+..-.++...-+|||| +-|+++.+.+|+++.++.++..++|-+|-||. .|.. ++..++ ..... ++
T Consensus 170 sdl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfA-SGD~~~DawAiR~fV~~g~e~fv 247 (410)
T KOG1412|consen 170 SDLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFA-SGDLDADAWAIRYFVEQGFELFV 247 (410)
T ss_pred HHHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccc-cCCccccHHHHHHHHhcCCeEEE
Confidence 67776544444444444577777 66699999999999999999999999999884 3332 222221 11122 23
Q ss_pred --EecccccC-Cccchhhh--ee-CHHHHhhcCCC---CCCCCCCCCHHHHHHHHHHHHHHhhh----cH-------HHH
Q 017259 194 --ILGKALGG-GVIPVSAV--LA-DKEVMLCIQPG---EHGSTFGGNPLASAVAIASLDVIRDE----KL-------AER 253 (374)
Q Consensus 194 --s~sK~~~~-G~~~~G~~--~~-~~~~~~~~~~~---~~~~~~~~~~~~~~aa~~al~~~~~~----~~-------~~~ 253 (374)
||+|.+|- +- |+|-+ +. ++..+..+..- ....+++ ++++..|-+ +-+.+... +| -.+
T Consensus 248 ~QSFaKNfGlYne-RvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArI-V~kvL~tP~lre~W~~sik~MssR 324 (410)
T KOG1412|consen 248 CQSFAKNFGLYNE-RVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARI-VHKVLSTPELREQWIQSIKTMSSR 324 (410)
T ss_pred Ehhhhhhcccccc-cccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHH-HHHHhcCHHHHHHHHHHHHHHHHH
Confidence 88899984 66 77763 23 33433333211 0112222 333333322 22333221 22 344
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceee-EEEEeeeEEEEeccCCCchhHHHHHHHHHH-CCeEeccCCCCEEEEecCCCCCH
Q 017259 254 SAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTHDTIVRLTPPLSISS 331 (374)
Q Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~lRi~~~~~~~~ 331 (374)
+++.+..+++.|..+. -|+-=.. ++..|.|..- |.+. .-+++|.+ +.|+....+ ||+++ .++.
T Consensus 325 I~~MR~aLrd~L~aL~--TPGtWDHI~~QiGMFSyT-------GLtp-~qV~~li~~h~vyLl~~G----RInis-GLN~ 389 (410)
T KOG1412|consen 325 IKKMRTALRDHLVALK--TPGTWDHITQQIGMFSYT-------GLTP-AQVDHLIENHKVYLLSDG----RINIS-GLNM 389 (410)
T ss_pred HHHHHHHHHHHHHhcC--CCCcHHHHHhhccceeec-------CCCH-HHHHHHHHhceEEEecCC----cEeee-cccc
Confidence 4444444444444442 1111000 1222332221 1133 34566655 467776554 66544 4566
Q ss_pred HHHHHHHHHHHHHHhccC
Q 017259 332 NELQEGSKALHDVLELDL 349 (374)
Q Consensus 332 e~i~~~~~~l~~~~~~~~ 349 (374)
..++....+|.++.+ .+
T Consensus 390 ~NveyVAkAIde~Vr-~~ 406 (410)
T KOG1412|consen 390 KNVEYVAKAIDETVR-AI 406 (410)
T ss_pred ccHHHHHHHHHHHHH-hh
Confidence 688889998888877 54
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.15 E-value=0.00056 Score=61.59 Aligned_cols=170 Identities=15% Similarity=0.144 Sum_probs=109.3
Q ss_pred CEEEEeccccCCcccccCcccccCCCCCcEEEec--ccccC-CccchhhheeCHHHHhhcCCC------------CCCCC
Q 017259 163 ILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGG-GVIPVSAVLADKEVMLCIQPG------------EHGST 227 (374)
Q Consensus 163 i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~s--K~~~~-G~~~~G~~~~~~~~~~~~~~~------------~~~~~ 227 (374)
.++++|-+-.-++ ....+. +-|++.+| |.+|+ |+ +.++.++++.+++... ..+.+
T Consensus 171 ~~~v~D~SS~ils---r~iDvs----k~dviyagaQKnlGpaGl---tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~ 240 (365)
T COG1932 171 GLLVADASSAILS---RPIDVS----KYDVIYAGAQKNLGPAGL---TVVIVRPDLLERAESYTLPSIFDYLTHADNGSM 240 (365)
T ss_pred ceEEEecccHHhc---CCCChh----HcceEEEehhhccCccce---EEEEEcHHHHhcccccCCchHhhchhhhccCCc
Confidence 7788887654232 122221 23677666 99984 43 5577899988888653 12334
Q ss_pred C-CCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHH
Q 017259 228 F-GGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI 302 (374)
Q Consensus 228 ~-~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 302 (374)
| .++.++.....-+++++... .+.++-+++.+.+.+.+.+-..-.+.+....++..+ +.|.+.+.. -...|
T Consensus 241 yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mn-V~f~~~~~~---ld~~f 316 (365)
T COG1932 241 YNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMN-VTFTLVDAE---LDKGF 316 (365)
T ss_pred cCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhcccee-EEEEcCcHH---HHHHH
Confidence 4 44666667777788888774 566777777777777776542111112233333333 334454432 45678
Q ss_pred HHHHHHCCeEeccCC--CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 303 CLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 303 ~~~l~~~Gi~v~~~~--~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
.+.+.++|+..-.++ .+.+|+++.-+.+.++++.+++-++.+.+
T Consensus 317 v~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 317 VAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred HHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 888888887664443 45699999999999999999999987765
No 388
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.15 E-value=0.00022 Score=72.64 Aligned_cols=272 Identities=14% Similarity=0.092 Sum_probs=149.7
Q ss_pred HHHHHHHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccC
Q 017259 23 FPVFAERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGF 100 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 100 (374)
..++...+++++|.+ +.=....+|.+-|+++++.+ ..++ +++++++.+..+............
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~----~~~~---k~~~~~v~~~~hP~~~~v~~t~~~-------- 190 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKR----VAKS---KSNRFFVDEHCHPQTLSVLRTRAE-------- 190 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHH----Hhhc---CCCEEEECCCCCHHHHHHHHHhhh--------
Confidence 345777888888877 55667777777775555443 1121 136777776664222111111111
Q ss_pred CCCCCCceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec-cccCCccccc
Q 017259 101 GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE-IQSGLARSGR 179 (374)
Q Consensus 101 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De-a~~~~~~~g~ 179 (374)
+ .++..+ .+++++.+. +.+.++++..+ |..|.+.+ +++|.+++|++|.++|+-- ..+ ++-...
T Consensus 191 -~--~g~~i~----~~~~~~~~~---~~~~~v~vq~P-~~~G~i~d----~~~i~~~~h~~gal~~~~~d~la-L~ll~~ 254 (954)
T PRK12566 191 -G--FGFELV----VDAVDNLAA---HAVFGALLQYP-DTHGEIRD----LRPLIDQLHGQQALACVAADLLS-LLVLTP 254 (954)
T ss_pred -c--CCcEEE----EcchhhcCC---CCEEEEEEECC-CCceEEcc----HHHHHHHHHHcCCEEEEEeCHHH-HhCCCC
Confidence 1 112221 134444443 46888877544 34577766 9999999999999876321 111 110001
Q ss_pred CcccccCCCCCcEE-Eeccccc-----CCccchhhheeCHHHHhhcCCC----------------------------CCC
Q 017259 180 MLASDWEEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPG----------------------------EHG 225 (374)
Q Consensus 180 ~~~~~~~~~~~d~~-s~sK~~~-----~G~~~~G~~~~~~~~~~~~~~~----------------------------~~~ 225 (374)
.-++..|++ ..++.|| ||- -.|++..++++...+-.. +..
T Consensus 255 -----Pge~GADI~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAt 328 (954)
T PRK12566 255 -----PGELGADVVLGSTQRFGVPMGYGGP-HAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKAN 328 (954)
T ss_pred -----hhhcCCcEEeeCCCcCCCCCCCCCC-CeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhcccc
Confidence 112345665 2234333 343 467778888766555321 111
Q ss_pred CCCCCCHHHHHHHHHHH--HHHhhhc---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHH
Q 017259 226 STFGGNPLASAVAIASL--DVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY 300 (374)
Q Consensus 226 ~~~~~~~~~~~aa~~al--~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 300 (374)
.+.+.+.. +.|..+++ -.+..++ +-+++..+..++.+.|++.+... . .. ..|--|.+.-.. ...
T Consensus 329 SNICT~qa-L~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~---~--~~--~fF~~~~v~~~~---~~~ 397 (954)
T PRK12566 329 SNICTAQV-LLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKR---L--NR--HFFDTLTLEVGG---AQA 397 (954)
T ss_pred chhhHHHH-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcc---c--cC--CccceEEEEccC---CHH
Confidence 12222221 22222221 2223343 34556667777777777743221 1 11 222223332221 467
Q ss_pred HHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 301 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 301 ~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
++.+...+.||-++-.+.+.+.|++....+.+|++.+++.+.
T Consensus 398 ~~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 398 AIIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 899999999999988778889999999999999999999884
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.13 E-value=5e-05 Score=66.08 Aligned_cols=181 Identities=14% Similarity=0.170 Sum_probs=111.6
Q ss_pred cCCCCCc-HHHHHHHHhcccCCCeEE---ecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCccccccccc
Q 017259 16 RAFYNDK-FPVFAERLTSMFGYDMVL---PMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMS 91 (374)
Q Consensus 16 ~~~~~~~-~~~l~~~l~~~~~~~~~~---~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~ 91 (374)
+++.+++ ++.|++-.+..++.+..+ -.-||++|+..|+--+ ..+| |+.+...++=.-...-.+.+.
T Consensus 59 GYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~-----LRpg-----Dell~i~G~PYDTLeevIG~r 128 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGI-----LRPG-----DELLYITGSPYDTLEEVIGLR 128 (416)
T ss_pred CCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhc-----cCCC-----CeEEEecCCcchhHHHHhccC
Confidence 4444444 556888888888888543 2447889999998877 5677 888887765222122222222
Q ss_pred CC--ccccccCCCCCCCceeccCC-----CHHHHHHHHHhcCCcEEEEEEccccC--CCCcccCChhHHHHHHHHHHhc-
Q 017259 92 CD--NEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQG--EAGVIIPPDGYLKAVRDLCSKY- 161 (374)
Q Consensus 92 ~~--~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~~~~~--~~g~~~~~~~~l~~l~~l~~~~- 161 (374)
+. .... .....-.-++.. |.+.++..++ ++|+++.+--.-+ ..-++ +-.+++++.++.++-
T Consensus 129 g~~~gSL~----dfgi~Y~~v~Lt~~gkiD~~~v~~~i~---~~tkli~IQRS~GY~~RpS~--~I~eI~~~i~~vk~in 199 (416)
T COG4100 129 GEGQGSLK----DFGIKYKAVPLTADGKIDIQAVKTAIS---DRTKLIGIQRSKGYAWRPSL--SIAEIEEMITFVKEIN 199 (416)
T ss_pred CCCcccHH----HhCcceeecccccCCcccHHHHHHhcC---ccceEEEEEeccCcCCCCcc--cHHHHHHHHHHHHhcC
Confidence 21 1111 000111112221 7888988888 6888888764321 11111 445678888888774
Q ss_pred -CCEEEEeccccCCcccccCcccccCCCCCcEE--EecccccCCccchh-hheeCHHHHhhcC
Q 017259 162 -NILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVS-AVLADKEVMLCIQ 220 (374)
Q Consensus 162 -~i~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~G-~~~~~~~~~~~~~ 220 (374)
++++.+|.+|++|...-++. ....|++ |+-|..|||++..| |+++.+++.++..
T Consensus 200 pn~ivFVDNCYGEFvE~~EPt-----~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 200 PNVIVFVDNCYGEFVEEKEPT-----HVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred CCEEEEEeccchhhhhccCcc-----ccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 79999999999875433331 2345655 77899999876665 5778888887764
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00074 Score=62.40 Aligned_cols=228 Identities=14% Similarity=0.095 Sum_probs=110.0
Q ss_pred CHHHHHHHHHhc-C-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCcccccCCC-CC
Q 017259 114 DITALEKIFKES-G-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RP 190 (374)
Q Consensus 114 d~~~le~~l~~~-~-~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~~~~-~~ 190 (374)
+.+.|.++|++- . .-+-.+++ ...+.++.. .-+.+.+|..+|+++|++|.+|.+|+|-...-+.+....-|+ ..
T Consensus 218 r~~~L~~AIe~D~arGlIPf~v~-at~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~a 294 (511)
T KOG0628|consen 218 RGDTLRKAIEEDIARGLIPFFVC-ATLGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYA 294 (511)
T ss_pred CHHHHHHHHHHHHhCCCccEEEE-EeecCcccc--ccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhh
Confidence 578888888852 1 12333444 444444432 455699999999999999999999995211111111100111 01
Q ss_pred cEE--Eeccc-----------ccCCccchhh-heeCH-HHHhhcCCC----CCCCCCCCCHHHHHHHHHHHHHHhhhcHH
Q 017259 191 DMV--ILGKA-----------LGGGVIPVSA-VLADK-EVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLA 251 (374)
Q Consensus 191 d~~--s~sK~-----------~~~G~~~~G~-~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~ 251 (374)
|-. -.+|+ +-.|. .+.- .-.++ .+....... .+.+.--+-.+-..=.+-.++.+.-++++
T Consensus 295 DSfn~n~hK~~~vnfDCs~lWvkd~~-~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq 373 (511)
T KOG0628|consen 295 DSFNFNPHKWLLVNFDCSPLWVKDGT-KLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQ 373 (511)
T ss_pred ccccCChhheeEEeeeeecceeecCc-eeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHH
Confidence 100 11222 11121 1111 11111 111111111 11111011222222333445555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCC-eEeccC---CCCEEEEecCC
Q 017259 252 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG-ILAKPT---HDTIVRLTPPL 327 (374)
Q Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~G-i~v~~~---~~~~lRi~~~~ 327 (374)
+++++..+ +.+..+.+...-+.+-...+.--.++.|.+.+.. ....++.+++...| |.+.+. +.-.||++...
T Consensus 374 ~~iR~h~~-La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N--~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s 450 (511)
T KOG0628|consen 374 NYIREHVR-LAKEFETLVRADPRFEIVNKRILGLVCFRLKGDN--EINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCS 450 (511)
T ss_pred HHHHHHHH-HHHHHHHHhhcCCcceeecccccceeEEeecCCc--HHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecC
Confidence 66655443 3344444432211122222222334455554331 14566777776664 777765 45678997654
Q ss_pred C-CCHHHHHHHHHHHHHHHhccC
Q 017259 328 S-ISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 328 ~-~~~e~i~~~~~~l~~~~~~~~ 349 (374)
. .+.+++++..+.|.+..+ ++
T Consensus 451 ~~t~~~di~~a~~~I~~~a~-~l 472 (511)
T KOG0628|consen 451 PLTNESDIDEAWKIIFEAAD-EL 472 (511)
T ss_pred CCCcHHHHHHHHHHHHHHHH-HH
Confidence 4 467889999998888777 53
No 391
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.64 E-value=0.0016 Score=58.05 Aligned_cols=152 Identities=16% Similarity=0.144 Sum_probs=84.3
Q ss_pred EecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCcc-ccccCCCCCCCceeccCCCHHHH
Q 017259 40 LPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPGHLKVDFGDITAL 118 (374)
Q Consensus 40 ~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l 118 (374)
+.+-|||-|+-.+-..+..+. ++ ..|.++.|++..+ .......+.+. ++.-+.| .... -|.+.+
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~---~~-----~~I~ip~PTWgNh-~~if~~ag~~~~~yrYyd~---~t~g---ld~~g~ 188 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFY---PS-----RDIYIPDPTWGNH-KNIFKDAGLPVKFYRYYDP---KTRG---LDFKGM 188 (427)
T ss_pred EEeccCcchhhHHHHHHHhhc---cc-----cceeecCCccccc-CccccccCcceeeeeeccc---cccc---cchHHH
Confidence 556677777777776665432 24 8899999997332 22222221111 1111111 0000 033433
Q ss_pred HHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCc----ccccC-CCCCcE-
Q 017259 119 EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDWE-EVRPDM- 192 (374)
Q Consensus 119 e~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~----~~~~~-~~~~d~- 192 (374)
-+-+...++.--.++-..-+|++| +-|+++.+++|.++.++.+.+-++|-+|-||. .|... +...+ ...-++
T Consensus 189 ledl~~~p~gs~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfa-SG~~d~DA~avR~F~~~g~~~~ 266 (427)
T KOG1411|consen 189 LEDLGEAPEGSIILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFA-SGDLDKDAQAVRLFVEDGHEIL 266 (427)
T ss_pred HHHHhcCCCCcEEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhcccc-cCCchhhHHHHHHHHHcCCceE
Confidence 333343333333333334566666 67799999999999999999999999999883 33321 11111 111122
Q ss_pred E--EecccccC-Cccchhhh
Q 017259 193 V--ILGKALGG-GVIPVSAV 209 (374)
Q Consensus 193 ~--s~sK~~~~-G~~~~G~~ 209 (374)
+ |++|.||- |- |+|.+
T Consensus 267 laQSyAKNMGLYgE-RvGa~ 285 (427)
T KOG1411|consen 267 LAQSYAKNMGLYGE-RVGAL 285 (427)
T ss_pred eehhhhhhcchhhh-cccee
Confidence 2 78899994 66 88874
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.43 E-value=0.00039 Score=59.53 Aligned_cols=224 Identities=17% Similarity=0.200 Sum_probs=110.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccc--cCcccccCCCCCc
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASDWEEVRPD 191 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g--~~~~~~~~~~~~d 191 (374)
|++.+++.+++.++.....+.++... ..+-+++.+++|..+|..|+++-|+..+|+ +.... ......+.--..|
T Consensus 142 dleav~~~iee~g~dcilci~sttsc---fapr~pd~leaiaaica~~diphivnnayg-lqsee~i~~iaa~~~~grid 217 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTSC---FAPRSPDNLEAIAAICAAHDIPHIVNNAYG-LQSEECIHKIAAAAECGRID 217 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecccc---cCCCCCchHHHHHHHHHccCchhhhccccc-cchHHHHHHHHHHhhhccHH
Confidence 78899999998776644444443321 223367889999999999999999999985 21100 0111111101112
Q ss_pred --EEEecccccCCccchhh-he--eCHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh--hcHHHHHHHHHHHHHHH
Q 017259 192 --MVILGKALGGGVIPVSA-VL--ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH 264 (374)
Q Consensus 192 --~~s~sK~~~~G~~~~G~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~~~~ 264 (374)
+-|+-|.+- +|+|. ++ .++.+++.+.+..-+...+.+ +.-..+..+-.... .+.....++..-+++..
T Consensus 218 a~vqsldknf~---vpvggaiia~fk~n~iq~iak~ypgrasa~p--s~dllitll~~gqn~f~e~~~eqkemf~~l~~k 292 (432)
T KOG3843|consen 218 AFVQSLDKNFM---VPVGGAIIAAFKDNFIQEIAKMYPGRASASP--SLDLLITLLSLGQNAFKELFGEQKEMFLKLRNK 292 (432)
T ss_pred HHHHHhhhcce---eecchhHhhHhHHHHHHHHHHhCCCccccCc--cHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Confidence 226667765 24443 22 345555555432222211112 22222222222111 12233333444444444
Q ss_pred HHHHHHhCCCceeeEEEEeeeEEEEeccCC-Cch-hHHHHHHHHHHCCe---EeccC----------------------C
Q 017259 265 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-LPV-SAYDICLKMKERGI---LAKPT----------------------H 317 (374)
Q Consensus 265 l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~~~~~~~l~~~Gi---~v~~~----------------------~ 317 (374)
+..+...+...+..++....-..+.++..+ ..+ ....|-..|..+|| -+.|. +
T Consensus 293 i~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~ 372 (432)
T KOG3843|consen 293 IIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQH 372 (432)
T ss_pred HHHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCc
Confidence 444443332334344333322333332111 000 12335555666654 22221 1
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 318 DTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 318 ~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
..++-+......++.|++.++++|.+.+.
T Consensus 373 ~~yln~a~aigm~~hdld~~~~rl~~~~a 401 (432)
T KOG3843|consen 373 CAYLNAACAIGMKDHDLDEFFNRLDRCLA 401 (432)
T ss_pred hhHhhHHHhcCCcHhHHHHHHHHHHHHHH
Confidence 24555555567889999999999988776
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.27 E-value=0.0009 Score=54.00 Aligned_cols=57 Identities=9% Similarity=-0.006 Sum_probs=46.6
Q ss_pred cCCCCCcHHHHHHHHhcccC------CCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCC
Q 017259 16 RAFYNDKFPVFAERLTSMFG------YDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHG 82 (374)
Q Consensus 16 ~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg 82 (374)
..+..++++.+++.+.+.+| .++|++|+|+++|++.++..+ ..+| |.|++..|.|+|
T Consensus 91 ~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l-----~dpG-----D~VlVp~P~Y~~ 153 (153)
T PLN02994 91 YHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCI-----ADPG-----DAFLVPTPYYAA 153 (153)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHH-----cCCC-----CEEEEeCCCCCC
Confidence 34556677778888877644 458999999999999999988 5677 999999999964
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.05 E-value=1.4 Score=43.36 Aligned_cols=269 Identities=15% Similarity=0.217 Sum_probs=136.3
Q ss_pred HHHhcccCCC--eEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCC
Q 017259 28 ERLTSMFGYD--MVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP 105 (374)
Q Consensus 28 ~~l~~~~~~~--~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 105 (374)
..+++++|.+ ++=+..-|+.|-++.....+ ..++ +++++.+.. |.-+....-.... +.
T Consensus 170 Tmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~----~~kr-----kk~vvd~~~-hpqtlsV~~TRa~--------~~-- 229 (1001)
T KOG2040|consen 170 TMITDLTGLPMANASLLDEGTAAAEAMALCNR----INKR-----KKFVVDSNC-HPQTLSVVKTRAK--------GF-- 229 (1001)
T ss_pred HhhhhccCCcccchhhhccchhHHHHHHHHHh----hccc-----ceEEecCCC-Ccchhhhhhcccc--------cc--
Confidence 3445555554 44445556666666555554 3333 666666666 4443333222111 11
Q ss_pred CceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCcccccCccccc
Q 017259 106 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 185 (374)
Q Consensus 106 ~~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g~~~~~~~ 185 (374)
++. +...|+++..... ..+.++++--+ ...|.+.+ ..++++.+++.+..+++-.-.-.+.-...+ .
T Consensus 230 ~i~-v~~~~~~~~~~s~----~~v~gvlvQYP-~t~G~i~d----~~el~~~a~~~~s~vv~atDLLaLtiLrpP---g- 295 (1001)
T KOG2040|consen 230 GIK-VVVSDIKEADYSS----KDVSGVLVQYP-DTEGSVLD----FDELVELAHANGSLVVMATDLLALTILRPP---G- 295 (1001)
T ss_pred cee-EEecCHHHhhccc----cceeEEEEEcC-CCCCcccC----HHHHHHHhhccCceEEEeehhhHHHccCCh---h-
Confidence 111 2223444433222 35777766433 44577887 999999999999887653211111000000 1
Q ss_pred CCCCCcEE-Eeccccc-----CCccchhhheeCHHHHhhcCCCCCCCC------------------------CCCCHHHH
Q 017259 186 EEVRPDMV-ILGKALG-----GGVIPVSAVLADKEVMLCIQPGEHGST------------------------FGGNPLAS 235 (374)
Q Consensus 186 ~~~~~d~~-s~sK~~~-----~G~~~~G~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~ 235 (374)
++..|+. ..|..|| ||- --|++...+++...+-....+.+ -..|.-.+
T Consensus 296 -efGaDIavGSsQRFGVPlGYGGP-HAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTA 373 (1001)
T KOG2040|consen 296 -EFGADIAVGSSQRFGVPLGYGGP-HAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTA 373 (1001)
T ss_pred -hcCceeeeccccccCccccCCCc-hHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHH
Confidence 1234544 3334333 333 33455555554433321111100 01121122
Q ss_pred HHHHHHHHHH----hh----hcHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEEEeeeEEEEeccCCCchhHHHHHHHHH
Q 017259 236 AVAIASLDVI----RD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK 307 (374)
Q Consensus 236 ~aa~~al~~~----~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~ 307 (374)
.|.++-+..+ .- +++.+++....-.+...|+..+..+ + ....|-.+.+... .+..++.++..
T Consensus 374 QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel---~----~k~fFDTLkI~~~---~s~~~~l~rA~ 443 (1001)
T KOG2040|consen 374 QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHEL---Q----HKPFFDTLKIRCG---CSAEEVLDRAA 443 (1001)
T ss_pred HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhh---c----cccccceEEEEec---CcHHHHHHHHH
Confidence 2222222211 11 2445566666666666666654332 1 1112222222222 15889999999
Q ss_pred HCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 308 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 308 ~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
+++|-.+-...+.+-+++-.+.+++|++.++..+.
T Consensus 444 ~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 444 KRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred hhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 99888888888889999888899999999998774
No 395
>smart00642 Aamy Alpha-amylase domain.
Probab=77.64 E-value=8.2 Score=31.58 Aligned_cols=59 Identities=14% Similarity=0.107 Sum_probs=39.9
Q ss_pred CHHHHHHHHHhcC-CcEEEEEEccccCCCCc-----------------ccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 114 DITALEKIFKESG-DQIAGFLFEPIQGEAGV-----------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 114 d~~~le~~l~~~~-~~~~~vi~~~~~~~~g~-----------------~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
|++.+.+.|..-. -...+|.+.|+...... ..-+.+.++++++-||++|+.||.|-+..
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5555555543211 24677888886433310 22366889999999999999999998875
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=72.23 E-value=29 Score=30.95 Aligned_cols=135 Identities=11% Similarity=0.061 Sum_probs=73.9
Q ss_pred hheeCHHHHhhcCCCC-----------CCCCC-CCCHHHHHHHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHh
Q 017259 208 AVLADKEVMLCIQPGE-----------HGSTF-GGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQ 271 (374)
Q Consensus 208 ~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~ 271 (374)
.++.+++++....... ...-| .++.++..+.--.++++.+. .+.+..++..+.+.+.+.+-.+.
T Consensus 214 vvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gf 293 (370)
T KOG2790|consen 214 VVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGF 293 (370)
T ss_pred EEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 3556777766554321 11112 33445555555566776654 34444555566666665443221
Q ss_pred CC-CceeeEEEEeeeEEEEeccCCCchhHHHHHHHHHHCCeEeccC--CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 272 FP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 272 ~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+. ++-...++. .-+.|.+.++. ...+|.+...+++.+---+ +-+.+|.++.-+.+-++.+++++-+++..+
T Consensus 294 y~cpVe~~~RS~-MNV~Fri~~d~---Le~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 294 YRCPVEPSVRSR-MNVPFRIEKDE---LEAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred EEcccchhhhhh-cccceeecchH---HHHHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 10 122222222 22334454332 4556666666665443222 357899998888999999999998887765
No 397
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=70.47 E-value=8.4 Score=33.63 Aligned_cols=49 Identities=10% Similarity=0.232 Sum_probs=36.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..+.+++++. +.-++++-|..+..-. --..+++|.+++++.++++++|.
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRdp~---~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRDPA---ILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCCHH---HHHHHHHHHHHHhcCCCcEEEcC
Confidence 3556666676 6778888887755322 33458899999999999999995
No 398
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=68.61 E-value=53 Score=29.66 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=28.9
Q ss_pred EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccC
Q 017259 129 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 173 (374)
Q Consensus 129 ~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~ 173 (374)
......... ..+|--.++++.++.+..+++..|+ +.|=+|++
T Consensus 243 ~~v~~~~dy-~~~~Yg~p~~e~~e~i~~~~~~eGi--llDpVYtg 284 (323)
T COG2515 243 ADVLLSDDY-HHPGYGKPNEEDIEAIKLLARLEGI--LLDPVYTG 284 (323)
T ss_pred ceEEEEecc-cCCccCCcCHHHHHHHHHHHHhhCc--ccccccch
Confidence 333434333 3344445589999999999999997 56888875
No 399
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=67.90 E-value=56 Score=29.83 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=22.0
Q ss_pred CChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
|+.+.-+++.+|+++.+++||.|==|
T Consensus 58 ~~~e~A~A~~~Ik~~~~vPLVaDiHf 83 (361)
T COG0821 58 PDMEAAEALKEIKQRLNVPLVADIHF 83 (361)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 37777999999999999999999543
No 400
>PF14116 YyzF: YyzF-like protein
Probab=66.60 E-value=12 Score=23.47 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCCCCCCCCCCCCCcccccc
Q 017259 331 SNELQEGSKALHDVLELDLPKMRKPKPADAPATPCHRCGRN 371 (374)
Q Consensus 331 ~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (374)
+|+++.+++.+-.-.+ ..+.+........+++.|.-|++.
T Consensus 3 ~EHie~AiD~~Vde~e-~aP~i~~l~~~~~~~~~C~~C~~~ 42 (48)
T PF14116_consen 3 EEHIELAIDDFVDEYE-QAPDIEKLEEVEKLPTTCEYCDQP 42 (48)
T ss_pred HHHHHHHHHHHHHhhc-cCCCeEeccccCCCCCcchhhCCC
Confidence 4678888887766666 666777676666799999999864
No 401
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=62.14 E-value=36 Score=24.08 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.+...++|++ .+.+.+++-... ++...+.+.++|++++++++.-+.
T Consensus 16 ~~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 16 TKQTVKALKR--GSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECC
Confidence 4555566764 366677765543 445699999999999999986554
No 402
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=60.05 E-value=58 Score=27.14 Aligned_cols=104 Identities=11% Similarity=0.011 Sum_probs=45.4
Q ss_pred eEEecCChHHH-HHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHH
Q 017259 38 MVLPMNTGAEG-VETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDIT 116 (374)
Q Consensus 38 ~~~~~~~gs~a-~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 116 (374)
..++...+|.+ +.++..++.......++ -.|++...+-.|.......+. ....+...|++.+.
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~-----~~illT~~T~tg~~~~~~~~~-----------~~v~~~~~P~D~~~ 85 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPD-----LRILLTTTTPTGREMARKLLP-----------DRVDVQYLPLDFPW 85 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---T-----S-EEEEES-CCHHHHHHGG-G-----------GG-SEEE---SSHH
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCC-----CeEEEEecCCchHHHHHHhCC-----------CCeEEEEeCccCHH
Confidence 45555555554 34444555432211123 566666555444433322211 01346667887888
Q ss_pred HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 117 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 117 ~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.+++.++...+ -.+++++.- .+..+...|++.|++++.=++
T Consensus 86 ~~~rfl~~~~P-~~~i~~EtE------------lWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 86 AVRRFLDHWRP-DLLIWVETE------------LWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp HHHHHHHHH---SEEEEES----------------HHHHHH-----S-EEEEEE
T ss_pred HHHHHHHHhCC-CEEEEEccc------------cCHHHHHHHhhcCCCEEEEee
Confidence 88888887633 345555542 277889999999997775544
No 403
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=59.32 E-value=1.5e+02 Score=27.38 Aligned_cols=54 Identities=15% Similarity=0.009 Sum_probs=34.6
Q ss_pred CHHHHHHHHHhcCCcEEEEEEc--cccCC-----CCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 114 DITALEKIFKESGDQIAGFLFE--PIQGE-----AGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~--~~~~~-----~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
+.++.++++.. -..++.+. |..+. +|.-.|.-.-+.++++.++++++.+|.|.-
T Consensus 160 T~e~a~~Li~a---GAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGG 220 (343)
T TIGR01305 160 TGEMVEELILS---GADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGG 220 (343)
T ss_pred CHHHHHHHHHc---CCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCC
Confidence 67887777763 23344433 22222 344446666777888888888999999964
No 404
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=58.16 E-value=15 Score=36.73 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=28.8
Q ss_pred CChhHHHHHHHHHHhcCCEEEEeccccCCcccc
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 178 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~~~~~~g 178 (374)
-+++.++++++-||++||-||+|=++.-|+..+
T Consensus 211 GtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 211 GTPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 389999999999999999999999998665444
No 405
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=56.59 E-value=53 Score=23.28 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
+...+++++ .+.+.+++-..- ++...+.|.++|+.++++++......
T Consensus 14 ~~vlkaIk~--gkakLViiA~Da--------~~~~~k~i~~~c~~~~Vpv~~~~t~~ 60 (82)
T PRK13601 14 KQTLKAITN--CNVLQVYIAKDA--------EEHVTKKIKELCEEKSIKIVYIDTMK 60 (82)
T ss_pred HHHHHHHHc--CCeeEEEEeCCC--------CHHHHHHHHHHHHhCCCCEEEeCCHH
Confidence 444556654 467777775544 55669999999999999997655443
No 406
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=56.39 E-value=36 Score=29.99 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=41.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCc--ccCChhHHHHHHHHHHhcCCEEE
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGV--IIPPDGYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~--~~~~~~~l~~l~~l~~~~~i~li 166 (374)
-+.|.+++..++...-.+|++|.++++.. -.++..+.++|.++-+..|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 56777778888777778889998888743 34789999999999877777766
No 407
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=55.41 E-value=30 Score=29.58 Aligned_cols=50 Identities=16% Similarity=0.264 Sum_probs=34.1
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.+.+|++++ ..+.++.+-.-...+-. ..+..+++.++|++|++.+|+++=
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~~~---~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSDEE---YLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCChHH---HHHHHHHHHHHHHHhCCeEEecCc
Confidence 678888887 45555555543322211 145578999999999999998863
No 408
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=55.22 E-value=21 Score=33.41 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=28.5
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 128 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 128 ~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
+..+++++.+.- |.+.+ .+.+.++|+++|+++++|-
T Consensus 143 ~~~~vVLSDY~K--G~L~~----~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 143 SFDALVLSDYAK--GVLTN----VQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred cCCEEEEecccc--ccchh----HHHHHHHHHHcCCcEEECC
Confidence 667787766532 55555 8999999999999999994
No 409
>PRK11633 cell division protein DedD; Provisional
Probab=55.20 E-value=79 Score=27.32 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=44.6
Q ss_pred EEEEeccCCCchhHHHHHHHHHHCCeEecc-----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 286 NAVEFDKTALPVSAYDICLKMKERGILAKP-----THDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-----~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
|.+.+-.......++.+...|...|+-... ..+.+.|+-.+-..+.+++++....|+++..
T Consensus 150 ~vVQlgaf~n~~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~~G 215 (226)
T PRK11633 150 YVVQLGALKNADKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQLSG 215 (226)
T ss_pred EEEEecccCCHHHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHhcC
Confidence 344443333234788999999999975533 3356889988889999999999999988654
No 410
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.80 E-value=72 Score=23.40 Aligned_cols=45 Identities=7% Similarity=0.128 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHCCeEeccC---------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 298 SAYDICLKMKERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~---------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+++++.+.|.++|+-.+.. ++..+.|. ..+++++.+...|++.++
T Consensus 12 da~~l~~~L~d~~fraTkLAsTGGFlkaGNTTfliG----ved~~vd~~~s~Ike~C~ 65 (109)
T COG3870 12 DANELEDALTDKNFRATKLASTGGFLKAGNTTFLIG----VEDDRVDALRSLIKENCK 65 (109)
T ss_pred cHHHHHHHHHhCCceeEEeeccCceeecCCeEEEEe----cccchhHHHHHHHHHHhh
Confidence 7899999999999876532 24455554 678889999999998887
No 411
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.14 E-value=38 Score=30.76 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=23.0
Q ss_pred ChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
+.+++.+|.++|++.|..+++|-.-
T Consensus 144 ~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 144 PPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CHHHHHHHHHHHHhcCCeEEEECCh
Confidence 7899999999999999999999654
No 412
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=51.73 E-value=54 Score=24.15 Aligned_cols=42 Identities=10% Similarity=0.003 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
....+.+++ .+.+.+++.... ++...+.+.++|++++++++.
T Consensus 22 ~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 22 KRTIKAIKL--GKAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 444556664 356666665443 556699999999999999865
No 413
>PF10013 DUF2256: Uncharacterized protein conserved in bacteria (DUF2256); InterPro: IPR017136 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=51.34 E-value=10 Score=22.82 Aligned_cols=15 Identities=33% Similarity=0.902 Sum_probs=12.7
Q ss_pred CCCCCCCCccccccC
Q 017259 358 ADAPATPCHRCGRNL 372 (374)
Q Consensus 358 ~~~~~~~~~~~~~~~ 372 (374)
.+.|.++|..||+..
T Consensus 4 ~~lp~K~C~~C~rpf 18 (42)
T PF10013_consen 4 SNLPSKICPVCGRPF 18 (42)
T ss_pred ccCCCCcCcccCCcc
Confidence 477999999999864
No 414
>PRK06683 hypothetical protein; Provisional
Probab=50.94 E-value=68 Score=22.68 Aligned_cols=49 Identities=10% Similarity=-0.011 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
....++|++ .+.+.+++-... ++...+.+.++|+.++++++.-+.-.++
T Consensus 17 ~~v~kaik~--gkaklViiA~Da--------~~~~~~~i~~~~~~~~Vpv~~~~t~~eL 65 (82)
T PRK06683 17 KRTLEAIKN--GIVKEVVIAEDA--------DMRLTHVIIRTALQHNIPITKVESVRKL 65 (82)
T ss_pred HHHHHHHHc--CCeeEEEEECCC--------CHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 444555654 467777775543 4556999999999999999876644333
No 415
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=50.88 E-value=1.3e+02 Score=25.46 Aligned_cols=55 Identities=11% Similarity=0.170 Sum_probs=35.4
Q ss_pred CHHHHHHHHHhcCC--cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 114 DITALEKIFKESGD--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 114 d~~~le~~l~~~~~--~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
+..++-+.|..... .+..+.+.-.+ . .+++.+..|.+++.++|+++|+=.--.+|
T Consensus 66 ~~~~i~~~i~~~~~~~~~~~v~IDEaQ-----F-~~~~~v~~l~~lad~lgi~Vi~~GL~~DF 122 (201)
T COG1435 66 SDTDIFDEIAALHEKPPVDCVLIDEAQ-----F-FDEELVYVLNELADRLGIPVICYGLDTDF 122 (201)
T ss_pred ChHHHHHHHHhcccCCCcCEEEEehhH-----h-CCHHHHHHHHHHHhhcCCEEEEecccccc
Confidence 34444444554322 25677776654 2 27888999999999999999964443333
No 416
>PF14149 YhfH: YhfH-like protein
Probab=48.79 E-value=5.5 Score=23.31 Aligned_cols=14 Identities=29% Similarity=1.058 Sum_probs=11.9
Q ss_pred CCCCCCCccccccC
Q 017259 359 DAPATPCHRCGRNL 372 (374)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (374)
+.|++.|..||+..
T Consensus 10 nLp~K~C~~CG~~i 23 (37)
T PF14149_consen 10 NLPPKKCTECGKEI 23 (37)
T ss_pred hCCCcccHHHHHHH
Confidence 67999999999864
No 417
>TIGR03829 YokU_near_AblA uncharacterized protein, YokU family. Members of this protein family occur in various species of the genus Bacillus, always next to the gene (kamA or ablA) for lysine 2,3-aminomutase. Members have a pair of CXXC motifs, and share homology to the amino-terminal region of a family of putative transcription factors for which the C-terminal is modeled by pfam01381, a helix-turn-helix domain model. This family, however, is shorter and lacks the helix-turn-helix region. The function of this protein family is unknown, but a regulatory role in compatible solute biosynthesis is suggested by local genome context.
Probab=48.09 E-value=9 Score=27.53 Aligned_cols=14 Identities=29% Similarity=0.966 Sum_probs=12.2
Q ss_pred CCCCCCCCcccccc
Q 017259 358 ADAPATPCHRCGRN 371 (374)
Q Consensus 358 ~~~~~~~~~~~~~~ 371 (374)
.+.|+..|.+||+.
T Consensus 31 knVPa~~C~~CGe~ 44 (89)
T TIGR03829 31 KETPSISCSHCGME 44 (89)
T ss_pred ecCCcccccCCCcE
Confidence 47899999999985
No 418
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=48.03 E-value=16 Score=32.68 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=23.6
Q ss_pred ChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
+.+.+++|++.||++|+.||.|-+..
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhhccccccceEEEeeecc
Confidence 67789999999999999999998864
No 419
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=47.44 E-value=29 Score=29.11 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=28.2
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 127 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 127 ~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
=++++++++-.+- .|+... .+++.+++++||+++|.
T Consensus 155 l~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 4578888877654 565555 89999999999999884
No 420
>PF14787 zf-CCHC_5: GAG-polyprotein viral zinc-finger; PDB: 1CL4_A 1DSV_A.
Probab=45.57 E-value=9.5 Score=22.12 Aligned_cols=11 Identities=45% Similarity=1.235 Sum_probs=6.1
Q ss_pred CCCCCcccccc
Q 017259 361 PATPCHRCGRN 371 (374)
Q Consensus 361 ~~~~~~~~~~~ 371 (374)
|+..|.+|||-
T Consensus 1 ~~~~CprC~kg 11 (36)
T PF14787_consen 1 PPGLCPRCGKG 11 (36)
T ss_dssp ---C-TTTSSS
T ss_pred CCccCcccCCC
Confidence 57889999985
No 421
>PF02686 Glu-tRNAGln: Glu-tRNAGln amidotransferase C subunit; InterPro: IPR003837 Glu-tRNAGln amidotransferase is a heterotrimeric enzyme that is required for correct decoding of glutamine codons during translation. The Glu-tRNA Gln amidotransferase enzyme is an important translational fidelity mechanism replacing incorrectly charged Glu-tRNAGln with the correct Gln-tRANGln via transmidation of the misacylated Glu-tRNAGln []. This activity supplements the lack of glutaminyl-tRNA synthetase activity in Gram-positive eubacteria, cyanobacteria, archaea, and organelles [].; GO: 0006450 regulation of translational fidelity; PDB: 2DQN_C 3IP4_C 2G5I_C 2F2A_C 2G5H_C 2DF4_C 3AL0_C 3KFU_G 3H0R_I 3H0L_U ....
Probab=45.53 E-value=25 Score=23.88 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHHHHhccCCcCCCCCCCCCCCCCC
Q 017259 329 ISSNELQEGSKALHDVLELDLPKMRKPKPADAPATPC 365 (374)
Q Consensus 329 ~~~e~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
+++++++++...|..+++ .+..+...+..+.+|+.+
T Consensus 1 l~eeE~~~~~~~l~~il~-~~~~l~~vdt~~v~p~~~ 36 (72)
T PF02686_consen 1 LTEEELEKLTKQLNDILD-YVEKLQEVDTEGVEPMYH 36 (72)
T ss_dssp --HHHHHHHHHHHHHHHH-HHTTGGGS--TT----S-
T ss_pred CCHHHHHHHHHHHHHHHH-HHHHHhhcccCCCCcccc
Confidence 368899999999999999 888888888888877754
No 422
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=45.09 E-value=1.2e+02 Score=23.72 Aligned_cols=57 Identities=23% Similarity=0.257 Sum_probs=36.7
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEE-EEecccc
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILM-IADEIQS 172 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~--~i~l-i~Dea~~ 172 (374)
+.+.|.+.++++ ++..+++=-+.+..|..-+.....++.++..++. +++| .+||-++
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 689999999876 4555555545555565555666666665555443 7754 5799876
No 423
>PRK14810 formamidopyrimidine-DNA glycosylase; Provisional
Probab=44.90 E-value=34 Score=30.50 Aligned_cols=20 Identities=30% Similarity=0.386 Sum_probs=17.4
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
-..++++++.+.++++++++
T Consensus 191 ~~l~~~~~~~l~~a~~~vl~ 210 (272)
T PRK14810 191 SSLSRERLRKLHDAIGEVLR 210 (272)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 46899999999998888887
No 424
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=44.75 E-value=81 Score=23.48 Aligned_cols=44 Identities=18% Similarity=0.319 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
.+.+++++++ .+.+++++...- ++...+++.+.|+.++++++.-
T Consensus 22 ~~~v~~aik~--gk~~lVI~A~D~--------s~~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKK--KKVYLIIISNDI--------SENSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHc--CCceEEEEeCCC--------CHhHHHHHHHHHHHcCCCEEEe
Confidence 4556667775 356677665543 5666999999999999988643
No 425
>cd06068 H2MP_like-1 Putative [NiFe] hydrogenase-specific C-terminal protease. Sequence comparison shows similarity to hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing and assembly with other subunits. Hydrogenase maturation endopeptidases are responsible for the proteolytic processing, liberating a short C-terminal peptide by cleaving after a His or an Arg residue, e.g., HycI (E. coli) is involved in processing of HypE (the large subunit of hydrogenases 3). This cleavage is nickel dependent.
Probab=43.87 E-value=1.6e+02 Score=23.21 Aligned_cols=119 Identities=15% Similarity=0.106 Sum_probs=58.5
Q ss_pred HHHHHHHHhcccCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccCCCCcccccccccCCccccccCCC
Q 017259 23 FPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGP 102 (374)
Q Consensus 23 ~~~l~~~l~~~~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 102 (374)
-..++++|.+....+.+.+...|+...+.+...+.. .|.+++.+....|...+....-..... +
T Consensus 16 G~~v~~~L~~~~~~~~v~~~d~g~~~~~l~~~~~~~-----------~d~viiVDA~~~g~~PG~v~~~~~~~~-----~ 79 (144)
T cd06068 16 GVEVARRLRPRQLPPGVRVADFGIRGIHLAYELLDG-----------YDTLILVDAVPRGGEPGTLYVIELEDV-----D 79 (144)
T ss_pred HHHHHHHHhccCCCCCeEEEECCCCHHHHHHHHHhc-----------CCEEEEEEeccCCcCCCEEEEEechhc-----c
Confidence 345777787765455676677777766665444421 188888887654433222111100000 0
Q ss_pred CCCCceeccCC-CHHHHHHHHH---hcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 017259 103 LLPGHLKVDFG-DITALEKIFK---ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS 159 (374)
Q Consensus 103 ~~~~~~~~~~~-d~~~le~~l~---~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~ 159 (374)
.... ..-.+. .+..+-+.++ ..++++..+-+++..-..|.-. |++..+.+.++.+
T Consensus 80 ~~~~-~~s~H~~~~~~~l~~~~~l~~~~~~~~lvgi~~~~~~~g~~L-S~~v~~a~~~~~~ 138 (144)
T cd06068 80 AAPE-LLDAHGMNPDAVLALLRALGGTPPRVVVVGCEPADVDEGIGL-SEPVAAAVPEAVR 138 (144)
T ss_pred cccC-CCCCCCCCHHHHHHHHHHhCCCCCeEEEEEEEecccCCCCCc-CHHHHHHHHHHHH
Confidence 0000 011111 3444433333 3334566666777544444433 7777777666654
No 426
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=43.76 E-value=2.5e+02 Score=25.44 Aligned_cols=109 Identities=16% Similarity=0.126 Sum_probs=58.3
Q ss_pred cCCCeEEecCChHHHHHHHHHHHHHcccccccCCCCccEEEEeccC--CCCcccccccccCCccccccCCCCCCCceecc
Q 017259 34 FGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGC--FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD 111 (374)
Q Consensus 34 ~~~~~~~~~~~gs~a~~~al~~~~~~~~~~~G~~~~~~~vi~~~~~--yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
..-+++++|.|.|..++..++.+. ++| +.-+|++.++. +.|+..+ ..+. . .++...-
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~-----kk~---Rkf~viVaE~~p~~qgH~~A-k~la-----~-------~giettV 218 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAA-----KKG---RKFRVIVAEGAPNNQGHELA-KPLA-----Q-------AGIETTV 218 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHH-----hcc---CceEEEEeecCCcccchHhh-HHHH-----H-------cCCeeEE
Confidence 345689999999999999998884 343 11345555432 2232111 1111 0 1111111
Q ss_pred CCCHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 112 FGDITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 112 ~~d~~~le~~l~~~~~~~~~vi~~~-~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
..|.+-+ +.+.+ --++++... +..++|.+ ...-...++..+++|-+++|+=.
T Consensus 219 I~daaVf-A~Msr---VnKVIigt~avl~NGgl~--~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 219 IPDAAVF-AMMSR---VNKVIIGTHAVLANGGLR--APSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred eccHHHH-HHhhh---cceEEEEeeeEecCCCee--ccchHHHHHHHHHhcCCcEEEec
Confidence 1243333 34443 223444443 45555533 44557778888999999998643
No 427
>cd04120 Rab12 Rab12 subfamily. Rab12 was first identified in canine cells, where it was localized to the Golgi complex. The specific function of Rab12 remains unknown, and inconsistent results about its cellular localization have been reported. More recent studies have identified Rab12 associated with post-Golgi vesicles, or with other small vesicle-like structures but not with the Golgi complex. Most Rab GTPases contain a lipid modification site at the C-terminus, with sequence motifs CC, CXC, or CCX. Lipid binding is essential for membrane attachment, a key feature of most Rab proteins. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic
Probab=43.04 E-value=33 Score=29.00 Aligned_cols=14 Identities=36% Similarity=0.688 Sum_probs=12.4
Q ss_pred CCCCCCCCCCCccc
Q 017259 355 PKPADAPATPCHRC 368 (374)
Q Consensus 355 ~~~~~~~~~~~~~~ 368 (374)
.+|.-+||+||++|
T Consensus 188 ~~~~~~~~~~~~~~ 201 (202)
T cd04120 188 IPPELPPPRPHVRC 201 (202)
T ss_pred CCcCCCCCCCCccc
Confidence 67788899999999
No 428
>PRK07714 hypothetical protein; Provisional
Probab=42.66 E-value=91 Score=22.93 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
.+.+.+++++ .+.+.+++...- ++...+.+.++|+.++++++.-
T Consensus 23 ~~~v~~al~~--g~~~lViiA~D~--------s~~~~~ki~~~~~~~~vp~~~~ 66 (100)
T PRK07714 23 EELVLKEVRS--GKAKLVLLSEDA--------SVNTTKKITDKCTYYNVPMRKV 66 (100)
T ss_pred HHHHHHHHHh--CCceEEEEeCCC--------CHHHHHHHHHHHHhcCCCEEEe
Confidence 4556667764 356666665543 5556899999999999998743
No 429
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=42.49 E-value=2.8e+02 Score=25.65 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=35.4
Q ss_pred CHHHHHHHHHhcCCcEEEEE----EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 114 DITALEKIFKESGDQIAGFL----FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi----~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
+.+..++.+..--+-+++=+ +++..-.+|.-.|.-.-+.++++.++++|+++|.|.-
T Consensus 161 T~e~a~~Li~aGAD~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGG 221 (346)
T PRK05096 161 TGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGG 221 (346)
T ss_pred CHHHHHHHHHcCCCEEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCC
Confidence 67777777664223333211 1222333455556666688888899999999999963
No 430
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=42.24 E-value=98 Score=23.24 Aligned_cols=43 Identities=5% Similarity=-0.113 Sum_probs=30.6
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
+...++|++ .+.+.|++.... ++...+.+.+.|+.++++++..
T Consensus 31 ~~vlkalk~--gkaklViiA~D~--------~~~~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 31 KSTLKALRN--GKAKLVIISNNC--------PPIRRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHc--CCeeEEEEeCCC--------CHHHHHHHHHHHhhcCCCEEEe
Confidence 344555664 367777776544 5555999999999999999853
No 431
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=41.86 E-value=24 Score=25.05 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=20.0
Q ss_pred HHHHHHHHHhcCCEEEEecccc
Q 017259 151 LKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~Dea~~ 172 (374)
-++|.++++++|++++.|...+
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 7899999999999999998765
No 432
>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species. It is likely to bind zinc via its four well-conserved cysteine residues.
Probab=41.81 E-value=10 Score=19.94 Aligned_cols=11 Identities=45% Similarity=0.966 Sum_probs=8.1
Q ss_pred CCCCCCccccc
Q 017259 360 APATPCHRCGR 370 (374)
Q Consensus 360 ~~~~~~~~~~~ 370 (374)
.=+++|.+||+
T Consensus 14 ~v~f~CPnCG~ 24 (24)
T PF07754_consen 14 AVPFPCPNCGF 24 (24)
T ss_pred CceEeCCCCCC
Confidence 45678888885
No 433
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=41.77 E-value=80 Score=24.97 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
.+.+++.++..++..+.+++.+.. + ..+.+++-+.+.++|++|.-..++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~~-~---~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPHV-P---RPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC-C---cchHHHHHHHHHHHHHHCCCcEEec
Confidence 466666666654556777776652 1 2224555677888999993334444
No 434
>TIGR01405 polC_Gram_pos DNA polymerase III, alpha chain, Gram-positive type. The N-terminal region of about 200 amino acids is rich in low-complexity sequence, poorly alignable, and not included n this model.
Probab=41.42 E-value=1.5e+02 Score=32.79 Aligned_cols=20 Identities=15% Similarity=0.062 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHCCeEeccCC
Q 017259 298 SAYDICLKMKERGILAKPTH 317 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~~ 317 (374)
...+++++..++|+.|.|.+
T Consensus 642 Iv~dlV~~a~~~gi~VG~RG 661 (1213)
T TIGR01405 642 ISQLLVQKSLQDGYLVGSRG 661 (1213)
T ss_pred HHHHHHHHHHHCCceECCCC
Confidence 46889999999999998853
No 435
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=41.13 E-value=76 Score=22.83 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHH-HHHHHHhcCCEEEEecccc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKA-VRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~-l~~l~~~~~i~li~Dea~~ 172 (374)
...+.+.+.+ .+.+.+++...- ++..+.. +..+|++++++++.=....
T Consensus 20 ~~~v~k~l~~--~~~~lvilA~d~--------~~~~~~~~l~~~c~~~~Ip~~~~~s~~ 68 (95)
T PF01248_consen 20 IKEVLKALKK--GKAKLVILAEDC--------SPDSIKKHLPALCEEKNIPYVFVPSKE 68 (95)
T ss_dssp HHHHHHHHHT--TCESEEEEETTS--------SSGHHHHHHHHHHHHTTEEEEEESHHH
T ss_pred hHHHHHHHHc--CCCcEEEEcCCC--------ChhhhcccchhheeccceeEEEECCHH
Confidence 5566667774 356666665543 3333666 9999999999998766543
No 436
>PRK13937 phosphoheptose isomerase; Provisional
Probab=41.02 E-value=2.1e+02 Score=23.75 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=20.2
Q ss_pred CcHHHHHHHHhccc-CCCeEEecCChHHHHH
Q 017259 21 DKFPVFAERLTSMF-GYDMVLPMNTGAEGVE 50 (374)
Q Consensus 21 ~~~~~l~~~l~~~~-~~~~~~~~~~gs~a~~ 50 (374)
+..+++++++++.. ..+++++...|+++..
T Consensus 22 ~~l~~aa~~i~~~l~~a~rI~i~G~G~S~~~ 52 (188)
T PRK13937 22 EAIAKVAEALIEALANGGKILLCGNGGSAAD 52 (188)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCcHhHHH
Confidence 45556667777654 7788877777776653
No 437
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=39.70 E-value=60 Score=21.37 Aligned_cols=46 Identities=11% Similarity=0.027 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 298 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
-..++.+.|.+.++.+...+...++++ +...+++.++++++|.+.+
T Consensus 16 v~~~~~~~L~~~~i~~i~~~~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 16 KLGPALEVFGKKPVHLVSQAANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 356778888788887765555556666 5678899999999987765
No 438
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=39.44 E-value=22 Score=32.06 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=22.2
Q ss_pred ChhHHHHHHHHH-HhcCCEEEEecccc
Q 017259 147 PDGYLKAVRDLC-SKYNILMIADEIQS 172 (374)
Q Consensus 147 ~~~~l~~l~~l~-~~~~i~li~Dea~~ 172 (374)
....+++|.++| +..+..||+||+|.
T Consensus 157 ~~sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 157 YRSRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred ccchHHHHHHHHhcCCCceEEeccchh
Confidence 456799999999 45789999999997
No 439
>PRK07283 hypothetical protein; Provisional
Probab=38.76 E-value=1e+02 Score=22.60 Aligned_cols=45 Identities=13% Similarity=0.033 Sum_probs=31.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEec
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 169 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~De 169 (374)
.+.+++++++ .+.+.+++.... ++...+.+.+.|+.++++++.-.
T Consensus 23 ~~~v~~aik~--gk~~lVi~A~Da--------s~~~~kk~~~~~~~~~Vp~~~~~ 67 (98)
T PRK07283 23 EELVVKAIQS--GQAKLVFLANDA--------GPNLTKKVTDKSNYYQVEVSTVF 67 (98)
T ss_pred HHHHHHHHHc--CCccEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEeC
Confidence 4556677774 356666665543 55668999999999999987544
No 440
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=38.32 E-value=54 Score=29.39 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=32.7
Q ss_pred HHHHHHHHHhcCCcEEE-EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 115 ITALEKIFKESGDQIAG-FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~-vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.+++.+-+.+-|++++. +.+|+-.- .. | .+++..+|.+.+|++++|-=|-
T Consensus 190 ~eqf~kni~~LP~~vksRl~LENDd~----sY-s---~eelL~lCek~~iPlVfD~HHh 240 (347)
T COG4294 190 LEQFIKNIQRLPDSVKSRLTLENDDK----SY-S---TEELLPLCEKLNIPLVFDAHHH 240 (347)
T ss_pred HHHHHHHHhhcCHHHHHhheeecccc----cc-c---HHHHHHHHHHhCCCEEEechhh
Confidence 55666656655554443 34444332 12 3 8899999999999999997554
No 441
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=38.30 E-value=53 Score=22.07 Aligned_cols=45 Identities=20% Similarity=0.142 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHCCeEe----ccCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 017259 298 SAYDICLKMKERGILA----KPTHDTIVRLTPPLSISSNELQEGSKALH 342 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v----~~~~~~~lRi~~~~~~~~e~i~~~~~~l~ 342 (374)
.+..+.+.|...|.-. ...+..+.|+..+...+.++.+..++.|+
T Consensus 17 ~A~~~~~~l~~~g~~~~~~~~~~~~~~yrV~~G~f~~~~~A~~~~~~l~ 65 (76)
T PF05036_consen 17 NAERLLAKLKKKGPDAYVVQVSKGGPWYRVRVGPFSSREEAEAALRKLK 65 (76)
T ss_dssp HHHHHHHHHHHHT-----EEEEEETTCEEEEECCECTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcceEEEecCCceEEEEECCCCCHHHHHHHHHHHh
Confidence 6788899998888642 23346777888777788889899998887
No 442
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=38.13 E-value=63 Score=26.65 Aligned_cols=47 Identities=17% Similarity=0.398 Sum_probs=32.5
Q ss_pred HHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 122 FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 122 l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
|.+.+-.+.+++.+|+-.|.... ...++++.++|++.|+.+|+++ |.
T Consensus 18 L~~~g~~vt~~fyNPNIhP~~Ey---~~R~~~~~~~~~~~~i~~i~~~-Y~ 64 (176)
T PF02677_consen 18 LREEGFDVTGYFYNPNIHPYEEY---ERRLEELKRFAEKLGIPLIEGD-YD 64 (176)
T ss_pred HHHCCCCeEEEEeCCCCCcHHHH---HHHHHHHHHHHHHcCCCEEecC-CC
Confidence 44444578888888864433221 2336778899999999999998 54
No 443
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=37.39 E-value=95 Score=20.65 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHCCeEe--ccCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 017259 298 SAYDICLKMKERGILA--KPTHDTIVRLTPPLSISSNELQEGSKALHDVL 345 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v--~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~ 345 (374)
...++.+.|.+.||-+ ...+...++++ +...+++.++++++|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 4667888888988777 33334446666 5678899999999998765
No 444
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=36.98 E-value=1.5e+02 Score=25.41 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=22.6
Q ss_pred ChhHHHHHHHHHHhc-CCEEEEecccc
Q 017259 147 PDGYLKAVRDLCSKY-NILMIADEIQS 172 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~-~i~li~Dea~~ 172 (374)
+++.++.+.++++++ ++++++|-+..
T Consensus 79 ~~~~~~~i~~~~~~~~~~~vv~Dpv~~ 105 (242)
T cd01169 79 SAEIIEAVAEALKDYPDIPVVLDPVMV 105 (242)
T ss_pred CHHHHHHHHHHHHhCCCCcEEECCcee
Confidence 788899999999998 89999997653
No 445
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=36.12 E-value=39 Score=32.95 Aligned_cols=26 Identities=19% Similarity=0.115 Sum_probs=23.8
Q ss_pred ChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
+.+.+++|++-||++|+.||+|-+.-
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 67779999999999999999998865
No 446
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=36.01 E-value=2.4e+02 Score=22.99 Aligned_cols=49 Identities=18% Similarity=0.202 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 115 ITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 115 ~~~le~~l~~~~--~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
-+.|.++.+.-. +++.++++ ...-.+|.+ -+++.++-++||+++|.=..
T Consensus 126 EE~laEAVkAV~rLpRv~iLVL-AGslMGGkI------teaVk~lr~~hgI~VISL~M 176 (218)
T COG1707 126 EEELAEAVKAVARLPRVGILVL-AGSLMGGKI------TEAVKELREEHGIPVISLNM 176 (218)
T ss_pred hHHHHHHHHHHhccccceeEEE-ecccccchH------HHHHHHHHHhcCCeEEEecc
Confidence 345555554321 34444433 333334443 57888888999999996444
No 447
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=35.97 E-value=68 Score=26.45 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCc-ccCC---hhHHHHHHHHHHhcCCEEEE
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGV-IIPP---DGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~-~~~~---~~~l~~l~~l~~~~~i~li~ 167 (374)
++.+++.+.+. ..+.+|++.+...-.+. ...+ ...++.|.++|+++|+.+++
T Consensus 129 ~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45666666652 24778999886544322 2211 35788899999999987663
No 448
>PRK10927 essential cell division protein FtsN; Provisional
Probab=35.84 E-value=2e+02 Score=26.17 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHCCeEecc-CCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 017259 297 VSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSNELQEGSKALHDV 344 (374)
Q Consensus 297 ~~~~~~~~~l~~~Gi~v~~-~~~~~lRi~~~~~~~~e~i~~~~~~l~~~ 344 (374)
.+++.+...|...|+-... ..++|.|+-++-..+.++++.+.+.|+.+
T Consensus 259 ~nAE~LrAkLa~~G~~A~I~~~g~~~RVrVGPf~sr~eAe~a~~rLk~a 307 (319)
T PRK10927 259 EQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMA 307 (319)
T ss_pred HHHHHHHHHHHHcCCeeEEccCCcEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 4788999999999964433 23569999988899999999999988753
No 449
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=35.40 E-value=2e+02 Score=25.82 Aligned_cols=42 Identities=24% Similarity=0.177 Sum_probs=32.5
Q ss_pred EEEEccccCCCCcccCChhHHHHHHHHHHhcC-CEEEEecccc
Q 017259 131 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-ILMIADEIQS 172 (374)
Q Consensus 131 ~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~-i~li~Dea~~ 172 (374)
.+++++..+.++.+..+=+.+++|.+++++.+ +-+.+|-+|.
T Consensus 137 ~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 137 IILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred eEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 34455555555555557777999999999998 9999999997
No 450
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=34.77 E-value=2.5e+02 Score=25.13 Aligned_cols=20 Identities=5% Similarity=0.019 Sum_probs=15.2
Q ss_pred hhHHHHHHHHHHhcCCEEEE
Q 017259 148 DGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 148 ~~~l~~l~~l~~~~~i~li~ 167 (374)
+----.++-+|+.|++++++
T Consensus 197 KiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 197 KAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred hhhHHHHHHHHHHcCCCEEE
Confidence 33355678888999999987
No 451
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=34.73 E-value=1.1e+02 Score=21.86 Aligned_cols=51 Identities=16% Similarity=0.117 Sum_probs=34.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
..+.-+++++ ...+.+++--.- ++..+..|..+|.+++++++.-+....+|
T Consensus 18 ~kqt~Kai~k--g~~~~v~iA~Da--------~~~vv~~l~~lceek~Ip~v~V~s~~~LG 68 (84)
T PRK13600 18 LKETLKALKK--DQVTSLIIAEDV--------EVYLMTRVLSQINQKNIPVSFFKSKHALG 68 (84)
T ss_pred HHHHHHHHhc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 3444556663 345555543322 45568999999999999999888776553
No 452
>TIGR03831 YgiT_finger YgiT-type zinc finger domain. This domain model describes a small domain with two copies of a putative zinc-binding motif CXXC (usually CXXCG). Most member proteins consist largely of this domain or else carry an additional C-terminal helix-turn-helix domain, resembling that of the phage protein Cro and modeled by pfam01381.
Probab=34.71 E-value=19 Score=21.84 Aligned_cols=18 Identities=28% Similarity=0.623 Sum_probs=13.5
Q ss_pred CCCCCCCCCCCccccccC
Q 017259 355 PKPADAPATPCHRCGRNL 372 (374)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~ 372 (374)
..-.+.|...|.+||+-.
T Consensus 25 ~~i~~vp~~~C~~CGE~~ 42 (46)
T TIGR03831 25 IVIENVPALVCPQCGEEY 42 (46)
T ss_pred EEEeCCCccccccCCCEe
Confidence 334577999999999864
No 453
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=34.60 E-value=1.2e+02 Score=23.24 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=30.9
Q ss_pred CHHHHHHHHHh-cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 114 DITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 114 d~~~le~~l~~-~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
+.+.+.+.+++ +....+++++....... -. -+++.+.|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~--~i-----P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD--EI-----PEEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc--cC-----CHHHHHHHHHcCCCEEE
Confidence 34556666654 22468888886653211 22 48899999999999984
No 454
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=34.09 E-value=2e+02 Score=24.07 Aligned_cols=37 Identities=3% Similarity=0.136 Sum_probs=25.8
Q ss_pred CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 127 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 127 ~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
.++.+++.+.....+|. ...++.+..+...+|..++-
T Consensus 106 gK~~~~f~s~g~~~Gg~----~~~l~~l~~~~~~~gm~vv~ 142 (200)
T PRK03767 106 GKVGSVFTSTGTQHGGQ----ETTITSTHTTLLHHGMVIVG 142 (200)
T ss_pred CCEEEEEEeCCCCCCCh----HHHHHHHHHHHHHcCCEEeC
Confidence 46767776665544553 33489999999999997764
No 455
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.54 E-value=57 Score=32.41 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=39.6
Q ss_pred CHHHHHHHHHhc-CCcEEEEEEccccCCCC---------------cccCChhHHHHHHHHHHhcCCEEEEeccccCC
Q 017259 114 DITALEKIFKES-GDQIAGFLFEPIQGEAG---------------VIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 174 (374)
Q Consensus 114 d~~~le~~l~~~-~~~~~~vi~~~~~~~~g---------------~~~~~~~~l~~l~~l~~~~~i~li~Dea~~~~ 174 (374)
+...+.+.|..- .=.+.+|.++|+....+ ...-+.+.++++++.||++||.||.|-++.-.
T Consensus 109 ~~~gi~~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~ 185 (542)
T TIGR02402 109 TFDAAIEKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHF 185 (542)
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 455554444421 12466787888632211 11225678999999999999999999988643
No 456
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=33.48 E-value=3.8e+02 Score=24.48 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=56.6
Q ss_pred EEEEeccCCCCcccccccccCCccccccCCCCCCCceeccCCCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhH
Q 017259 72 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGY 150 (374)
Q Consensus 72 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~~~~~~~~g~~~~~~~~ 150 (374)
.+.+..-+|.|.......+...+.+. .+.....|.+.+.+.++++ ++-+|+ +-.-.+..-++..+..+
T Consensus 29 v~~~DkLTYAgn~~~l~~~~~~~~~~---------fv~~DI~D~~~v~~~~~~~--~~D~VvhfAAESHVDRSI~~P~~F 97 (340)
T COG1088 29 VVNLDKLTYAGNLENLADVEDSPRYR---------FVQGDICDRELVDRLFKEY--QPDAVVHFAAESHVDRSIDGPAPF 97 (340)
T ss_pred EEEEecccccCCHHHHHhhhcCCCce---------EEeccccCHHHHHHHHHhc--CCCeEEEechhccccccccChhhh
Confidence 56777778888766655554433322 2222233778888888864 222222 11111111112212222
Q ss_pred H-------HHHHHHHHhcCC-----EEEEeccccCCcccccCcccccCCCCCcEE-Eeccc
Q 017259 151 L-------KAVRDLCSKYNI-----LMIADEIQSGLARSGRMLASDWEEVRPDMV-ILGKA 198 (374)
Q Consensus 151 l-------~~l~~l~~~~~i-----~li~Dea~~~~~~~g~~~~~~~~~~~~d~~-s~sK~ 198 (374)
+ -.|.+.+++|.. .|-.||+|+++...+.. ..+.....|.-. |-||+
T Consensus 98 i~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~-FtE~tp~~PsSPYSASKA 157 (340)
T COG1088 98 IQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDA-FTETTPYNPSSPYSASKA 157 (340)
T ss_pred hhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCC-cccCCCCCCCCCcchhhh
Confidence 2 356777888873 34469999977443322 223233444322 55564
No 457
>PLN03244 alpha-amylase; Provisional
Probab=33.09 E-value=56 Score=33.80 Aligned_cols=29 Identities=21% Similarity=0.192 Sum_probs=25.9
Q ss_pred ChhHHHHHHHHHHhcCCEEEEeccccCCc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQSGLA 175 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~~~~ 175 (374)
+++.++.+++-||++||-||.|=++.-++
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~ 467 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAA 467 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCC
Confidence 78889999999999999999999987443
No 458
>PF01930 Cas_Cas4: Domain of unknown function DUF83; InterPro: IPR022765 This entry represents an uncharacterised domain found in several proteins, including DNA replication helicase Dna2, clustered regularly interspaced short palindromic repeats (CRISPR)-associated exonuclease Cas4 and putative RecB family exonuclease proteins.
Probab=32.52 E-value=1.5e+02 Score=23.77 Aligned_cols=83 Identities=20% Similarity=0.300 Sum_probs=39.1
Q ss_pred EEeeeEEEEeccCCC--chhHHHHHH--HHHH-CCeEe------ccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhccC
Q 017259 281 GRGLFNAVEFDKTAL--PVSAYDICL--KMKE-RGILA------KPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 349 (374)
Q Consensus 281 ~~g~~~~~~~~~~~~--~~~~~~~~~--~l~~-~Gi~v------~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 349 (374)
..+..+.++++.... .....++.. .|++ .|+-+ ........++- .++++.+.+.+.+.++.+ -+
T Consensus 63 ~~~~~~~~E~K~~~~~~~~~~~Ql~~Y~~lL~~~g~~v~~G~i~y~~~~~~~~v~----~~~~~~~~v~~~i~~i~~-~~ 137 (162)
T PF01930_consen 63 GGGEIIPVEIKSGRKPREEHRMQLAAYALLLEEFGIPVKRGYIYYIEDRKRVRVE----ITEELRRKVEKLIEEIRK-IL 137 (162)
T ss_pred eCCEEEEEEEecCCCCcchhHHHHHHHHHHHHhcCccceeEEEEEecCCeEEEEe----CCHHHHHHHHHHHHHHHH-HH
Confidence 345556666654332 112333333 3344 34433 33445556654 566665555555555544 32
Q ss_pred CcCCCCCCCCCCCCCCccccc
Q 017259 350 PKMRKPKPADAPATPCHRCGR 370 (374)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~ 370 (374)
.. +..++. .+..-|..|.-
T Consensus 138 ~~-~~~P~~-~~~~~C~~C~y 156 (162)
T PF01930_consen 138 EG-ESPPPP-ENSKKCRRCSY 156 (162)
T ss_pred hC-CCcCCC-CCCCCCCCCCC
Confidence 22 223332 33337999963
No 459
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=32.39 E-value=2.3e+02 Score=27.97 Aligned_cols=75 Identities=23% Similarity=0.309 Sum_probs=43.4
Q ss_pred EEEEEEccccCCCCccc-CChhHHHHHHHHHHhcCCEEEEeccccC-----------CcccccCcccccC-CCCCcE-EE
Q 017259 129 IAGFLFEPIQGEAGVII-PPDGYLKAVRDLCSKYNILMIADEIQSG-----------LARSGRMLASDWE-EVRPDM-VI 194 (374)
Q Consensus 129 ~~~vi~~~~~~~~g~~~-~~~~~l~~l~~l~~~~~i~li~Dea~~~-----------~~~~g~~~~~~~~-~~~~d~-~s 194 (374)
+-.|+.|.+-...|.+. .+.+.-.+..++|..++|+|++=.=..| ..++|........ -..|-+ +.
T Consensus 325 pVGiIANqp~~~~G~l~~~sa~KaArFI~~cd~~~iPlv~L~d~pGFm~G~~~E~~giik~Gakl~~A~aeatVPkitvI 404 (526)
T COG4799 325 PVGIIANQPRHLGGVLDIDSADKAARFIRLCDAFNIPLVFLVDTPGFMPGTDQEYGGIIKHGAKLLYAVAEATVPKITVI 404 (526)
T ss_pred EEEEEecCccccccccchHHHHHHHHHHHhhhccCCCeEEEeCCCCCCCChhHHhChHHHhhhHHHhhHhhccCCeEEEE
Confidence 45566665555556555 3445556777999999998875322223 3334433222222 234544 36
Q ss_pred ecccccCCc
Q 017259 195 LGKALGGGV 203 (374)
Q Consensus 195 ~sK~~~~G~ 203 (374)
+.|++|||+
T Consensus 405 ~rkayGga~ 413 (526)
T COG4799 405 TRKAYGGAY 413 (526)
T ss_pred eccccccee
Confidence 789998877
No 460
>PRK13945 formamidopyrimidine-DNA glycosylase; Provisional
Probab=32.31 E-value=89 Score=28.06 Aligned_cols=20 Identities=20% Similarity=0.307 Sum_probs=17.7
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
-.+++++++.+.+.++++++
T Consensus 201 ~~Ls~~~~~~L~~~i~~vl~ 220 (282)
T PRK13945 201 GQLKKKQLERLREAIIEVLK 220 (282)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 46799999999999999887
No 461
>PLN00196 alpha-amylase; Provisional
Probab=31.84 E-value=52 Score=31.56 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=24.3
Q ss_pred CChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
-+++.++++++-||++||.||.|-+..
T Consensus 89 Gt~~elk~Lv~~aH~~GIkVilDvV~N 115 (428)
T PLN00196 89 GNEAQLKSLIEAFHGKGVQVIADIVIN 115 (428)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 367899999999999999999998865
No 462
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=31.41 E-value=4.1e+02 Score=25.46 Aligned_cols=54 Identities=11% Similarity=0.118 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHhcCCcEEEEEEccccCC--------CCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 113 GDITALEKIFKESGDQIAGFLFEPIQGE--------AGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 113 ~d~~~le~~l~~~~~~~~~vi~~~~~~~--------~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
.+++++.+.+++. ++.++++.+++.. +|++---++--.+|.++++..|+.++.=
T Consensus 155 t~~e~I~~~l~~~--~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fiV 216 (456)
T COG1066 155 TNLEDIIAELEQE--KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIV 216 (456)
T ss_pred cCHHHHHHHHHhc--CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 4789998888864 6778888776432 2433334566778999999999977653
No 463
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=31.33 E-value=3.2e+02 Score=23.00 Aligned_cols=17 Identities=6% Similarity=0.188 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCCEEEE
Q 017259 151 LKAVRDLCSKYNILMIA 167 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~ 167 (374)
+.++.++++++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 88999999999999983
No 464
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=31.30 E-value=1e+02 Score=24.64 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=28.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li 166 (374)
+.+++.+.++++ .+.-+++.-+.. +.+.++++.+.|+++++-+.
T Consensus 129 ~~~~l~~~~~~~--~id~v~ial~~~-------~~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DLDDLPELVREH--DIDEVIIALPWS-------EEEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -GGGHHHHHHHH--T--EEEE--TTS--------HHHHHHHHHHHHTTT-EEE
T ss_pred CHHHHHHHHHhC--CCCEEEEEcCcc-------CHHHHHHHHHHHHhCCCEEE
Confidence 688888888876 344444443332 67789999999999998764
No 465
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.18 E-value=18 Score=27.47 Aligned_cols=13 Identities=38% Similarity=0.994 Sum_probs=10.6
Q ss_pred CCCCCCCcccccc
Q 017259 359 DAPATPCHRCGRN 371 (374)
Q Consensus 359 ~~~~~~~~~~~~~ 371 (374)
-.||.-||+||+.
T Consensus 65 ye~psfchncgs~ 77 (160)
T COG4306 65 YEPPSFCHNCGSR 77 (160)
T ss_pred CCCcchhhcCCCC
Confidence 3489999999975
No 466
>PRK00448 polC DNA polymerase III PolC; Validated
Probab=31.16 E-value=2.7e+02 Score=31.42 Aligned_cols=20 Identities=20% Similarity=0.160 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHCCeEeccCC
Q 017259 298 SAYDICLKMKERGILAKPTH 317 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~~ 317 (374)
.+.+++++..+.|+.|.+.+
T Consensus 867 Iv~~lV~~a~~~g~lVG~RG 886 (1437)
T PRK00448 867 ISQKLVKKSLEDGYLVGSRG 886 (1437)
T ss_pred HHHHHHHHHHHCCceECCCC
Confidence 47899999999999998853
No 467
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=31.11 E-value=63 Score=24.33 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHCCeEeccC---------CCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 298 SAYDICLKMKERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~---------~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
++..+.+.|.++|+.++.. ++..+.|. ..++++++.++.|++..+
T Consensus 12 Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliG----vede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 12 DADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIG----VEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEE----EEGGGHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHCCceEEEEecccceeccCCEEEEEE----ecHHHHHHHHHHHHHhhc
Confidence 7899999999999988542 24555554 788899999999999887
No 468
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=30.48 E-value=89 Score=26.42 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=27.1
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 128 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 128 ~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
.+.+++++-.. ..|.... .+++.+++++|++++|.
T Consensus 157 ~p~~vicEil~-~dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMN-DDGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeC-CCCCccC----HHHHHHHHHHcCCcEEE
Confidence 45777777654 3676666 99999999999999874
No 469
>PRK12757 cell division protein FtsN; Provisional
Probab=30.24 E-value=2.6e+02 Score=24.71 Aligned_cols=47 Identities=15% Similarity=0.011 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHCCeEecc-CCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 017259 297 VSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSNELQEGSKALHD 343 (374)
Q Consensus 297 ~~~~~~~~~l~~~Gi~v~~-~~~~~lRi~~~~~~~~e~i~~~~~~l~~ 343 (374)
..++.+...|...|+-..- ..+++.|+-.+...+.++.+.+.++|+.
T Consensus 196 ~nAe~L~arL~~~G~~a~I~~~gg~yRVrVGPf~sr~~A~~~~~rLk~ 243 (256)
T PRK12757 196 EQAESVRAQLAFAGIESRITTGGGWNRVVLGPYNSKAAADKMLQRLKG 243 (256)
T ss_pred HHHHHHHHHHHhcCCceEEeecCCEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4788899999988853322 1246889988888899999999998875
No 470
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=29.72 E-value=1.4e+02 Score=23.32 Aligned_cols=21 Identities=19% Similarity=0.230 Sum_probs=18.4
Q ss_pred ChhHHHHHHHHHHhcCCEEEE
Q 017259 147 PDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~ 167 (374)
..+.+.++++.||+.||.+++
T Consensus 42 ~~Dllge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 42 KRDLLGEQVEACHERGIRVPA 62 (132)
T ss_pred CcCHHHHHHHHHHHCCCEEEE
Confidence 467899999999999998874
No 471
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.50 E-value=1.1e+02 Score=24.89 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCC--cccCC----hhHHHHHHHHHHhcCCEEE
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAG--VIIPP----DGYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g--~~~~~----~~~l~~l~~l~~~~~i~li 166 (374)
++.+-+.+++..++++++++.++..... ..... ...-+.+.++|+++++.+|
T Consensus 95 l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 95 YETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 3344344444445667777766421111 10111 2345678899999998876
No 472
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=29.35 E-value=79 Score=26.62 Aligned_cols=35 Identities=9% Similarity=0.227 Sum_probs=26.0
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 128 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 128 ~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
++.+++++-... .|.... .+++.+++++|++++|.
T Consensus 152 ~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 466777766543 677776 99999999999999984
No 473
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=29.34 E-value=2.3e+02 Score=20.73 Aligned_cols=58 Identities=17% Similarity=0.369 Sum_probs=33.9
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCC-EEEEecccc
Q 017259 114 DITALEKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNI-LMIADEIQS 172 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~-~~~~g~~~~~~~~l~~l~~l~~~~~i-~li~Dea~~ 172 (374)
+++.++...+..+-.+..-++-.- ...+.... .+..+++|.++++++++ .+|+|+-.+
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~i-G~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYI-GSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceee-chhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 355666655544334443333332 23334444 78889999999999887 556665433
No 474
>TIGR03677 rpl7ae 50S ribosomal protein L7Ae. Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs. Interacts with protein L15e.
Probab=29.05 E-value=1.8e+02 Score=22.06 Aligned_cols=49 Identities=10% Similarity=0.116 Sum_probs=32.0
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
.....++|++ .+..++++...-+ +.+..+.+.++|++++++++.-..-.
T Consensus 31 ~~~v~kaikk--gka~LVilA~D~s-------~~~~~~~i~~lc~~~~Ip~~~~~sk~ 79 (117)
T TIGR03677 31 TNEVTKAVER--GIAKLVVIAEDVE-------PPEIVAHLPALCEEKGIPYVYVKKKE 79 (117)
T ss_pred HHHHHHHHHc--CCccEEEEeCCCC-------cHHHHHHHHHHHHHcCCCEEEeCCHH
Confidence 4555667774 3566666655431 22347999999999999987655433
No 475
>PLN02361 alpha-amylase
Probab=28.99 E-value=63 Score=30.70 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=23.5
Q ss_pred ChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 147 PDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 147 ~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
++++++++++-||++|+.+|.|-+.-
T Consensus 74 t~~el~~li~~~h~~gi~vi~D~V~N 99 (401)
T PLN02361 74 SEHLLKSLLRKMKQYNVRAMADIVIN 99 (401)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEEccc
Confidence 67889999999999999999998753
No 476
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=28.86 E-value=1.9e+02 Score=24.28 Aligned_cols=48 Identities=23% Similarity=0.077 Sum_probs=28.6
Q ss_pred HHHHHHHHHh----cCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 017259 115 ITALEKIFKE----SGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 115 ~~~le~~l~~----~~~~~~~vi~~~-~~~~~g~~~~~~~~l~~l~~l~~~~~i~li 166 (374)
.+++..++++ .+.+.+++|+-+ .+++.|.+.| .+.-+++++++|+.++
T Consensus 94 adAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P----~~aAa~lA~~~gV~iy 146 (191)
T cd01455 94 VEATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQP----KKLADALAREPNVNAF 146 (191)
T ss_pred HHHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCCh----HHHHHHHHHhCCCEEE
Confidence 3555555543 222234444444 5556677776 5555788999999775
No 477
>PRK14811 formamidopyrimidine-DNA glycosylase; Provisional
Probab=28.83 E-value=1e+02 Score=27.48 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.4
Q ss_pred HHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 304 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 304 ~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
+.|...||.-... ...+++++++.+.+.++++++
T Consensus 166 EiLf~A~I~P~~~---------~~~Ls~~~~~~L~~~i~~vl~ 199 (269)
T PRK14811 166 ESLWRARIHPARP---------ATSLKAPEARRLYRAIREVMA 199 (269)
T ss_pred HHHHHcCCCccCC---------cccCCHHHHHHHHHHHHHHHH
Confidence 4466676543211 246899999999888888876
No 478
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=28.78 E-value=3.4e+02 Score=23.65 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=23.8
Q ss_pred CcccCChhHHHHHHHHHHhcCC-EEEEeccc
Q 017259 142 GVIIPPDGYLKAVRDLCSKYNI-LMIADEIQ 171 (374)
Q Consensus 142 g~~~~~~~~l~~l~~l~~~~~i-~li~Dea~ 171 (374)
|.+. +.+.++.+.+++++++. ++++|-+.
T Consensus 74 G~l~-~~~~~~~i~~~~~~~~~~~vVlDPv~ 103 (254)
T TIGR00097 74 GMLA-SAEIVEAVARKLREYPVRPLVVDPVM 103 (254)
T ss_pred CCcC-CHHHHHHHHHHHHhcCCCcEEECCcc
Confidence 4443 78889999999999999 69999764
No 479
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=28.68 E-value=2e+02 Score=24.45 Aligned_cols=51 Identities=8% Similarity=0.148 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.+.++++++ .....+.+--...+.-. =....+++.++|+++++.+|+.+-+
T Consensus 22 ~~~l~~~l~---~G~~~vqLR~k~~~~~~---~~~la~~l~~~~~~~~~~liInd~~ 72 (211)
T PRK03512 22 VQWIERLLD---AGVRTLQLRIKDRRDEE---VEADVVAAIALGRRYQARLFINDYW 72 (211)
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCHHH---HHHHHHHHHHHHHHhCCeEEEeCHH
Confidence 466777777 34556655433211000 0222466778899999999997644
No 480
>PRK12313 glycogen branching enzyme; Provisional
Probab=28.58 E-value=60 Score=32.98 Aligned_cols=27 Identities=15% Similarity=0.032 Sum_probs=24.4
Q ss_pred CChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
-+.+.++++++.||++||.||.|-++.
T Consensus 217 Gt~~d~k~lv~~~H~~Gi~VilD~V~n 243 (633)
T PRK12313 217 GTPEDFMYLVDALHQNGIGVILDWVPG 243 (633)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 367889999999999999999998875
No 481
>PHA00689 hypothetical protein
Probab=28.49 E-value=27 Score=21.61 Aligned_cols=9 Identities=44% Similarity=1.412 Sum_probs=7.3
Q ss_pred CCCcccccc
Q 017259 363 TPCHRCGRN 371 (374)
Q Consensus 363 ~~~~~~~~~ 371 (374)
-+|.+|||.
T Consensus 18 vtckrcgkt 26 (62)
T PHA00689 18 VTCKRCGKT 26 (62)
T ss_pred eehhhcccc
Confidence 389999984
No 482
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=28.41 E-value=1.1e+02 Score=23.54 Aligned_cols=47 Identities=9% Similarity=0.238 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHH---HHHHHHHHhcCCEEE
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL---KAVRDLCSKYNILMI 166 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l---~~l~~l~~~~~i~li 166 (374)
+-++.++.. +...+++.+ ++|.|...||.+.+ ++|.+.|+.-|+.++
T Consensus 55 ~I~~~al~~---~A~~vIl~H-NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~ll 104 (123)
T PF04002_consen 55 EIFRRALRL---NASSVILAH-NHPSGDPEPSDADIALTRRLKKAARLLGIELL 104 (123)
T ss_dssp HHHHHHHHT---T-SEEEEEE-E-TTS--S--HHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHHHHHhh---CCceEEEEE-EcCCCCCCCCHhHHHHHHHHHHHHHHcCCeee
Confidence 345667774 333344433 34557788898888 899999999888664
No 483
>PLN02672 methionine S-methyltransferase
Probab=27.54 E-value=4e+02 Score=29.14 Aligned_cols=50 Identities=4% Similarity=-0.044 Sum_probs=32.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEecc
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 170 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea 170 (374)
.+-+-+.|++. ++.++++.--. +... +...++.|.+.+++.|.+++.|..
T Consensus 516 ~~~~~~~~~~~--~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 516 SDLVIELIKKL--KPQVVVTGMAD---FEMR-TSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred chHHHHHHHhC--CCeEEEEeccc---hhhh-hHHHHHHHHHHHHhhCcEEEEehh
Confidence 34455566654 34445443322 2222 566699999999999999999975
No 484
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=27.48 E-value=1.1e+02 Score=28.12 Aligned_cols=57 Identities=12% Similarity=0.283 Sum_probs=37.2
Q ss_pred CHHHHHHHHHh--cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 114 DITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 114 d~~~le~~l~~--~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
+.+.+++.|+. ..++.+++++ -+++|+|.+..+..-.++|.++..+.-++++++..-
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~A 139 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYA 139 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCee
Confidence 45555555553 2245666655 355677888877777888888887776777777644
No 485
>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type
Probab=27.11 E-value=36 Score=17.86 Aligned_cols=10 Identities=50% Similarity=1.265 Sum_probs=7.9
Q ss_pred CCCCcccccc
Q 017259 362 ATPCHRCGRN 371 (374)
Q Consensus 362 ~~~~~~~~~~ 371 (374)
-.+|..|||-
T Consensus 2 l~~C~~CgR~ 11 (25)
T PF13913_consen 2 LVPCPICGRK 11 (25)
T ss_pred CCcCCCCCCE
Confidence 3589999985
No 486
>PRK13938 phosphoheptose isomerase; Provisional
Probab=27.08 E-value=3.8e+02 Score=22.52 Aligned_cols=18 Identities=0% Similarity=0.017 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHhcCCEEE
Q 017259 149 GYLKAVRDLCSKYNILMI 166 (374)
Q Consensus 149 ~~l~~l~~l~~~~~i~li 166 (374)
..+-++.+.++++|+.+|
T Consensus 127 ~~vi~a~~~Ak~~G~~vI 144 (196)
T PRK13938 127 MSVLRAAKTARELGVTVV 144 (196)
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 338889999999999888
No 487
>PRK01103 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Validated
Probab=27.06 E-value=1.2e+02 Score=26.96 Aligned_cols=20 Identities=30% Similarity=0.248 Sum_probs=17.8
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
..+++++++.+.+.++++++
T Consensus 192 ~~Ls~~~~~~L~~~~~~vl~ 211 (274)
T PRK01103 192 GSLSRAEAERLVDAIKAVLA 211 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 36899999999999999887
No 488
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.02 E-value=1.1e+02 Score=28.42 Aligned_cols=45 Identities=11% Similarity=0.104 Sum_probs=31.1
Q ss_pred CcEEEEEEccccCCCCcccC-------------ChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 127 DQIAGFLFEPIQGEAGVIIP-------------PDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 127 ~~~~~vi~~~~~~~~g~~~~-------------~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
++-.+|+.||.+-.-+.... ....--+|.+++++|||+++.|=.-
T Consensus 261 p~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enppL 318 (363)
T COG1377 261 PKADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPPL 318 (363)
T ss_pred CCCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChHH
Confidence 45678888887654433331 1234568999999999999998543
No 489
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=26.76 E-value=1.3e+02 Score=27.43 Aligned_cols=22 Identities=18% Similarity=0.379 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCEEEEecccc
Q 017259 151 LKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~Dea~~ 172 (374)
++++..+|++-+|++++|-.|-
T Consensus 201 l~evL~lc~e~~iP~v~D~hHh 222 (312)
T TIGR00629 201 VEDLLPVCEELNIPFVLDFHHH 222 (312)
T ss_pred HHHHHHHHHhcCCCEEEEhHHh
Confidence 8999999999999999996654
No 490
>PRK10785 maltodextrin glucosidase; Provisional
Probab=26.62 E-value=76 Score=31.98 Aligned_cols=59 Identities=14% Similarity=0.225 Sum_probs=41.3
Q ss_pred CHHHHHHHHHhc-CCcEEEEEEccccCCCCc-------------ccCChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 114 DITALEKIFKES-GDQIAGFLFEPIQGEAGV-------------IIPPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 114 d~~~le~~l~~~-~~~~~~vi~~~~~~~~g~-------------~~~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
|++.+.+.|.-- .=.+.+|+++|+..+.+. ..-+.+.+++|++-||++|+.||.|-+..
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 677776666532 124678889886543211 11255789999999999999999998854
No 491
>TIGR00577 fpg formamidopyrimidine-DNA glycosylase (fpg). All proteins in the FPG family with known functions are FAPY-DNA glycosylases that function in base excision repair. Homologous to endonuclease VIII (nei). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=26.51 E-value=1.3e+02 Score=26.93 Aligned_cols=20 Identities=30% Similarity=0.345 Sum_probs=17.6
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 017259 327 LSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 327 ~~~~~e~i~~~~~~l~~~~~ 346 (374)
-.+++++++.+.+.++++++
T Consensus 192 ~~Ls~~~~~~L~~~i~~vL~ 211 (272)
T TIGR00577 192 NSLSKEECELLHRAIKEVLR 211 (272)
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 46899999999999998886
No 492
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=26.36 E-value=42 Score=24.09 Aligned_cols=22 Identities=5% Similarity=0.104 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCEEEEecccc
Q 017259 151 LKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 151 l~~l~~l~~~~~i~li~Dea~~ 172 (374)
-++|.+.+++||+++..|....
T Consensus 34 Ae~II~~Ake~~Vpi~edp~Lv 55 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPLLV 55 (92)
T ss_pred HHHHHHHHHHcCCCcccCHHHH
Confidence 7899999999999999997655
No 493
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=26.18 E-value=82 Score=26.57 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe
Q 017259 114 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIAD 168 (374)
Q Consensus 114 d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~D 168 (374)
|.++++++++. =+-++++|.. -+++.+.|+++|++++--
T Consensus 69 ~~e~a~~a~~a----GA~FivSP~~------------~~~v~~~~~~~~i~~iPG 107 (196)
T PF01081_consen 69 TAEQAEAAIAA----GAQFIVSPGF------------DPEVIEYAREYGIPYIPG 107 (196)
T ss_dssp SHHHHHHHHHH----T-SEEEESS--------------HHHHHHHHHHTSEEEEE
T ss_pred CHHHHHHHHHc----CCCEEECCCC------------CHHHHHHHHHcCCcccCC
Confidence 78999998884 2346676654 588999999999999865
No 494
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.94 E-value=1.2e+02 Score=26.31 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=26.6
Q ss_pred cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 128 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 128 ~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
.+.+++++-. +..|.... .+++.+++++||+++|.
T Consensus 172 ~P~~vicEil-~~dG~ma~----~~~l~~fA~~~~l~iis 206 (230)
T PRK00014 172 RPAGVLCELM-NADGTMMR----GASLERYAAKEGLVALA 206 (230)
T ss_pred CceEEEEEEe-CCCCCccC----HHHHHHHHHHcCCcEEE
Confidence 3567777664 44466666 99999999999999864
No 495
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=25.66 E-value=71 Score=28.10 Aligned_cols=57 Identities=19% Similarity=0.074 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcC-CcEEEEEEc-ccc-CCCCc-c-cCChhHHHHHHHHHHhcCCEEEEeccc
Q 017259 115 ITALEKIFKESG-DQIAGFLFE-PIQ-GEAGV-I-IPPDGYLKAVRDLCSKYNILMIADEIQ 171 (374)
Q Consensus 115 ~~~le~~l~~~~-~~~~~vi~~-~~~-~~~g~-~-~~~~~~l~~l~~l~~~~~i~li~Dea~ 171 (374)
.++.-+.+++.+ +.+|..+.- ... +..+. . ...-..++++.+.|+++|+.+|+|=-.
T Consensus 23 ~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~ 84 (281)
T PF00150_consen 23 TEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHN 84 (281)
T ss_dssp HHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 344444555544 457777662 333 11221 1 113356889999999999999998544
No 496
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=25.63 E-value=3.5e+02 Score=22.93 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=33.7
Q ss_pred ceeccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 107 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 107 ~~~~~~~d~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
+...+++|.+.|.++++ .--+++++.+..+ . ...+.-+.+.+.|++.|+..++
T Consensus 47 vv~~d~~~~~~l~~al~---g~d~v~~~~~~~~-~----~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 47 VVEADYDDPESLVAALK---GVDAVFSVTPPSH-P----SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEES-TT-HHHHHHHHT---TCSEEEEESSCSC-C----CHHHHHHHHHHHHHHHT-SEEE
T ss_pred EeecccCCHHHHHHHHc---CCceEEeecCcch-h----hhhhhhhhHHHhhhccccceEE
Confidence 44566678999999998 2334555544433 1 1455588899999999987764
No 497
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=25.45 E-value=2.2e+02 Score=21.50 Aligned_cols=47 Identities=9% Similarity=0.237 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHH---HHHHHHHhcCCEEE
Q 017259 116 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLK---AVRDLCSKYNILMI 166 (374)
Q Consensus 116 ~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~---~l~~l~~~~~i~li 166 (374)
+-++.++.. ....+++.. ++|.|...||.+.++ +|.+.|+.-|+.++
T Consensus 50 ~i~~~aL~~---~A~~vil~H-NHPsG~~~PS~~D~~~T~~l~~~~~~l~i~ll 99 (113)
T cd08071 50 EIFKEALRH---NAAAIILAH-NHPSGDPTPSREDIELTKRLKEAGELLGIRLL 99 (113)
T ss_pred HHHHHHHHH---hhheEEEEe-eCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEe
Confidence 345666763 333444433 345577777777654 66777777788665
No 498
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=25.41 E-value=1.5e+02 Score=25.46 Aligned_cols=41 Identities=15% Similarity=0.383 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE
Q 017259 115 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 167 (374)
Q Consensus 115 ~~~le~~l~~~~~~~~~vi~~~~~~~~g~~~~~~~~l~~l~~l~~~~~i~li~ 167 (374)
.+.+++.+. .++.++++.+..... +..+.+-|++.|+++|.
T Consensus 45 ~~~i~~~i~---~~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 45 IEQIEQAIS---QGVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHH---TTESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHH---hcCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 456677776 468889988875422 45666778999999987
No 499
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=25.23 E-value=1.5e+02 Score=19.30 Aligned_cols=47 Identities=23% Similarity=0.353 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHCCeEeccCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 017259 298 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 346 (374)
Q Consensus 298 ~~~~~~~~l~~~Gi~v~~~~~~~lRi~~~~~~~~e~i~~~~~~l~~~~~ 346 (374)
-..++.+.|.+.||-+.-....-..++ +...+++.++++++|.+.+.
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is--~~v~~~~~~~av~~Lh~~f~ 63 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTIS--CLVSEDDVKEAVNALHEAFE 63 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEE--EEEcHHHHHHHHHHHHHHhc
Confidence 466888889899877743322334554 55788899999998887663
No 500
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=25.19 E-value=76 Score=32.11 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=24.2
Q ss_pred CChhHHHHHHHHHHhcCCEEEEecccc
Q 017259 146 PPDGYLKAVRDLCSKYNILMIADEIQS 172 (374)
Q Consensus 146 ~~~~~l~~l~~l~~~~~i~li~Dea~~ 172 (374)
-+++.++++++.||++|+.||.|-++.
T Consensus 203 Gt~~dlk~lV~~~H~~Gi~VilD~V~N 229 (613)
T TIGR01515 203 GTPDDFMYFVDACHQAGIGVILDWVPG 229 (613)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 367789999999999999999998875
Done!