BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017262
(374 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 160/282 (56%), Gaps = 5/282 (1%)
Query: 66 ELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI 125
+L++AT+ F+ ++G G G VYKG+L DG +A+K+ +EEF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH-DPYEELSLTWEMRLRIATEVAEAL 184
H ++V L+G C E +L+Y+++ NG L ++L+ +S++WE RL I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS-IAIDQTHVSTKVQGTFGYLD 243
YLH+ A I HRD+KS NILLDE + KI DFG S+ +DQTH+ V+GT GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDII 303
PEYF + T+KSDVYSFGVVL E+L + I E NL + VE L I+
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 304 DDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELE 345
D + E + D A +CL +RP+M +V +LE
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 166/288 (57%), Gaps = 4/288 (1%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE-EFINEVV 120
F+ +EL A+D F+ ILG+GG G VYKG LADG ++AVK+ K E +F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATE 179
++S HRN+++L G C+ LLVY ++ NG++ L + P + L W R RIA
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTF 239
A LAYLH I HRD+K+ NILLDE++ A + DFG ++ + HV V+GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP--ISSIWANEGRNLTTYFVECIEEN 297
G++ PEY + + ++K+DV+ +GV+L+EL+TGQ+ ++ + ++ L + ++E
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 298 CLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELE 345
L ++D ++ + + EE+ + VA C S RP M EV LE
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 159/282 (56%), Gaps = 5/282 (1%)
Query: 66 ELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI 125
+L++AT+ F+ ++G G G VYKG+L DG +A+K+ +EEF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH-DPYEELSLTWEMRLRIATEVAEAL 184
H ++V L+G C E +L+Y+++ NG L ++L+ +S++WE RL I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS-IAIDQTHVSTKVQGTFGYLD 243
YLH+ A I HRD+KS NILLDE + KI DFG S+ + QTH+ V+GT GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDII 303
PEYF + T+KSDVYSFGVVL E+L + I E NL + VE L I+
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 304 DDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELE 345
D + E + D A +CL +RP+M +V +LE
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 164/288 (56%), Gaps = 4/288 (1%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE-EFINEVV 120
F+ +EL A+D F ILG+GG G VYKG LADG ++AVK+ K E +F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATE 179
++S HRN+++L G C+ LLVY ++ NG++ L + P + L W R RIA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTF 239
A LAYLH I HRD+K+ NILLDE++ A + DFG ++ + HV V+G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP--ISSIWANEGRNLTTYFVECIEEN 297
G++ PEY + + ++K+DV+ +GV+L+EL+TGQ+ ++ + ++ L + ++E
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 298 CLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELE 345
L ++D ++ + + EE+ + VA C S RP M EV LE
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 166/307 (54%), Gaps = 24/307 (7%)
Query: 58 RCRIFNSKELDKATDYFNMNRI------LGQGGQGTVYKGMLADGRIIAVKKSKVVD--- 108
R F+ EL T+ F+ I +G+GG G VYKG + + + K + +VD
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 109 ESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSL 168
E ++F E+ ++++ H N+V+LLG + + LVY ++PNG+L L L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR-SIAID 227
+W MR +IA A + +LH + ++ HRDIKS NILLDE + AKI+DFG +R S
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRN-- 285
QT + +++ GT Y+ PE R + T KSD+YSFGVVL+E++TG + +E R
Sbjct: 188 QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV-----DEHREPQ 241
Query: 286 --LTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAME 343
L EE + D ID ++ + ++ + A+ VA +CL+ RP +K+V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 344 LERIRAN 350
L+ + A+
Sbjct: 301 LQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 165/307 (53%), Gaps = 24/307 (7%)
Query: 58 RCRIFNSKELDKATDYFNMNRI------LGQGGQGTVYKGMLADGRIIAVKKSKVVD--- 108
R F+ EL T+ F+ I +G+GG G VYKG + + + K + +VD
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 109 ESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSL 168
E ++F E+ ++++ H N+V+LLG + + LVY ++PNG+L L L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR-SIAID 227
+W MR +IA A + +LH + ++ HRDIKS NILLDE + AKI+DFG +R S
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRN-- 285
QT + ++ GT Y+ PE R + T KSD+YSFGVVL+E++TG + +E R
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV-----DEHREPQ 241
Query: 286 --LTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAME 343
L EE + D ID ++ + ++ + A+ VA +CL+ RP +K+V
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300
Query: 344 LERIRAN 350
L+ + A+
Sbjct: 301 LQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 164/307 (53%), Gaps = 24/307 (7%)
Query: 58 RCRIFNSKELDKATDYFNMNRI------LGQGGQGTVYKGMLADGRIIAVKKSKVVD--- 108
R F+ EL T+ F+ I +G+GG G VYKG + + + K + +VD
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 109 ESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSL 168
E ++F E+ ++++ H N+V+LLG + + LVY ++PNG+L L L
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR-SIAID 227
+W MR +IA A + +LH + ++ HRDIKS NILLDE + AKI+DFG +R S
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRN-- 285
Q + ++ GT Y+ PE R + T KSD+YSFGVVL+E++TG + +E R
Sbjct: 182 QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV-----DEHREPQ 235
Query: 286 --LTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAME 343
L EE + D ID ++ + ++ + A+ VA +CL+ RP +K+V
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 344 LERIRAN 350
L+ + A+
Sbjct: 295 LQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 24/307 (7%)
Query: 58 RCRIFNSKELDKATDYFNMNRI------LGQGGQGTVYKGMLADGRIIAVKKSKVVD--- 108
R F+ EL T+ F+ I G+GG G VYKG + + + K + +VD
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 109 ESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSL 168
E ++F E+ + ++ H N+V+LLG + + LVY + PNG+L L L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR-SIAID 227
+W R +IA A + +LH + ++ HRDIKS NILLDE + AKI+DFG +R S
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRN-- 285
Q +++ GT Y PE R + T KSD+YSFGVVL+E++TG + +E R
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV-----DEHREPQ 232
Query: 286 --LTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAME 343
L EE + D ID + + ++ + A VA +CL+ RP +K+V
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 344 LERIRAN 350
L+ A+
Sbjct: 292 LQEXTAS 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
N+ +G G GTV++ G +AVK + ++ EF+ EV I+ ++ H N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+G + +V E++ G+L++ LH L RL +A +VA+ + YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEYFRSS 250
PI HR++KS N+L+D+KY K+ DFG SR A T +S+K GT ++ PE R
Sbjct: 158 P-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVLRDE 214
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPISSIWAN 281
+KSDVYSFGV+L EL T Q+P W N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP----WGN 241
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 9/210 (4%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
N+ +G G GTV++ G +AVK + ++ EF+ EV I+ ++ H N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+G + +V E++ G+L++ LH L RL +A +VA+ + YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ 251
PI HRD+KS N+L+D+KY K+ DFG SR + S GT ++ PE R
Sbjct: 158 P-PIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 252 FTDKSDVYSFGVVLVELLTGQKPISSIWAN 281
+KSDVYSFGV+L EL T Q+P W N
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP----WGN 241
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 37/283 (13%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--------KLEEFINEVVILSQINHRNVV 131
+G+GG G V+KG L + + KS ++ +S K +EF EV I+S +NH N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
KL G L P +V EF+P G L+ L D + + W ++LR+ ++A + Y+ +
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 192 YLPIYHRDIKSTNIL---LDEKYR--AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
PI HRD++S NI LDE AK+ADFGTS+ H + + G F ++ PE
Sbjct: 143 -PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHSVSGLLGNFQWMAPET 197
Query: 247 FRSSQ--FTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIID 304
+ + +T+K+D YSF ++L +LTG+ P +E F+ I E L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIP 252
Query: 305 DQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ + +V + C + + RP + EL +
Sbjct: 253 EDCPPR--------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 37/283 (13%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--------KLEEFINEVVILSQINHRNVV 131
+G+GG G V+KG L + + KS ++ +S K +EF EV I+S +NH N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
KL G L P +V EF+P G L+ L D + + W ++LR+ ++A + Y+ +
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 192 YLPIYHRDIKSTNIL---LDEKYR--AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
PI HRD++S NI LDE AK+ADFG S+ H + + G F ++ PE
Sbjct: 143 -PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQWMAPET 197
Query: 247 FRSSQ--FTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIID 304
+ + +T+K+D YSF ++L +LTG+ P +E F+ I E L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIP 252
Query: 305 DQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ + +V + C + + RP + EL +
Sbjct: 253 EDCPPR--------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 37/283 (13%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--------KLEEFINEVVILSQINHRNVV 131
+G+GG G V+KG L + + KS ++ +S K +EF EV I+S +NH N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
KL G L P +V EF+P G L+ L D + + W ++LR+ ++A + Y+ +
Sbjct: 87 KLYG--LMHNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 192 YLPIYHRDIKSTNIL---LDEKYR--AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
PI HRD++S NI LDE AK+ADF S++ H + + G F ++ PE
Sbjct: 143 -PPIVHRDLRSPNIFLQSLDENAPVCAKVADF----SLSQQSVHSVSGLLGNFQWMAPET 197
Query: 247 FRSSQ--FTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIID 304
+ + +T+K+D YSF ++L +LTG+ P +E F+ I E L I
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIP 252
Query: 305 DQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ + +V + C + + RP + EL +
Sbjct: 253 EDCPPR--------LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 210 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 155
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 156 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 152 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 151 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 152 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 148
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 149 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + D H T + ++ E
Sbjct: 151 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 34/292 (11%)
Query: 78 RILGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
R LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 133 LLGCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
G C L+ EF+P G+L +YL E + L+ +++ + + YL +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI--KLLQYTSQICKGMEYLGTK 136
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYF 247
Y+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 137 RYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 192
Query: 248 RSSQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENC 298
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 299 LFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 253 RLP------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 135 GCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C +E P +V E++P G L YL + E +T + L +AT+++ A+ YL ++
Sbjct: 95 GVC-TLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE + F+
Sbjct: 153 ---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I+ + ++D+++ R
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPG----------------IDLSQVYDLLEKGYRMEQP 253
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
V ++ + C +RP+ E E + +S
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 25/300 (8%)
Query: 54 GSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE 113
G++D ++ E+++ TD M LG G G VY+G+ + K+ D ++E
Sbjct: 1 GAMDPSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 58
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEM 172
EF+ E ++ +I H N+V+LLG C ++ EF+ G L YL + +E++ +
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--V 116
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS 232
L +AT+++ A+ YL ++ HRD+ + N L+ E + K+ADFG SR + D
Sbjct: 117 LLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFV 291
+ + PE ++F+ KSDV++FGV+L E+ T G P I +L+ +
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY- 226
Query: 292 ECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
E +E++ + R G E+ V ++ + C +RP+ E+ E + S
Sbjct: 227 ELLEKDYRME------RPEGCPEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFI----NEVVILSQINHRN 129
+ I+G GG G VY+ G +AVK ++ + + + I E + + + H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPY--EELSLTWEMRLRIATEVAEALAYL 187
++ L G CL+ LV EF G L + L ++ + W A ++A + YL
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYL 121
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYR--------AKIADFGTSRSIAIDQTHVSTKVQ--G 237
H A +PI HRD+KS+NIL+ +K KI DFG +R + H +TK+ G
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAG 176
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+ ++ PE R+S F+ SDV+S+GV+L ELLTG+ P I
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + H T + ++ E
Sbjct: 150 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 168
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 169 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 142
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 143 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 151 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 147
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 148 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 150 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 169
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 170 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 146 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 24/266 (9%)
Query: 76 MNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
+ ++G+G G V K A R V ++ ES+ + FI E+ LS++NH N+VKL G
Sbjct: 12 VEEVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
CL LV E+ G+L+ LH T + + ++ +AYLHS +
Sbjct: 69 ACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 196 YHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HRD+K N+LL KI DFGT+ I QTH+ T +G+ ++ PE F S +++
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNKGSAAWMAPEVFEGSNYSE 182
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAE 314
K DV+S+G++L E++T +KP I R + + + R
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--------------VHNGTRPPLIKN 228
Query: 315 EIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ + RC + RP+M+E+
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 148
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 149 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 14/209 (6%)
Query: 75 NMNRILGQGGQGTVYKGMLAD--GRII--AVKK-SKVVDESKLEEFINEVVILSQINHRN 129
+ N ++G+G G VY G L D G+ I AVK +++ D ++ +F+ E +I+ +H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 130 VVKLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
V+ LLG CL E PL+V ++ +G L ++ + E + T + + +VA+ + YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ---THVSTKVQGTFGYLDPE 245
S ++ HRD+ + N +LDEK+ K+ADFG +R + + H T + ++ E
Sbjct: 151 SKKFV---HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 138
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 139 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 242
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 243 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 290
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 24/266 (9%)
Query: 76 MNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
+ ++G+G G V K A R V ++ ES+ + FI E+ LS++NH N+VKL G
Sbjct: 13 VEEVVGRGAFGVVCK---AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
CL LV E+ G+L+ LH T + + ++ +AYLHS +
Sbjct: 70 ACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 196 YHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HRD+K N+LL KI DFGT+ I QTH+ T +G+ ++ PE F S +++
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNKGSAAWMAPEVFEGSNYSE 183
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAE 314
K DV+S+G++L E++T +KP I R + + + R
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--------------VHNGTRPPLIKN 229
Query: 315 EIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ + RC + RP+M+E+
Sbjct: 230 LPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 285
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 54 GSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE 113
GS+D+ + + TD M LG G G VY+G+ + K+ D ++E
Sbjct: 1 GSLDKWEM-------ERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 52
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEM 172
EF+ E ++ +I H N+V+LLG C ++ EF+ G L YL + +E+S +
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--V 110
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS 232
L +AT+++ A+ YL ++ HRD+ + N L+ E + K+ADFG SR + D
Sbjct: 111 LLYMATQISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 167
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFV 291
+ + PE ++F+ KSDV++FGV+L E+ T G P
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-------------- 213
Query: 292 ECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
I+ + ++++++ R V ++ + C +RP+ E+ E + S
Sbjct: 214 --IDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 285
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
E+ V ++ + C +RP+ E+ E + S
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 131
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 132 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I+ + ++++++ R
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPG----------------IDPSQVYELLEKDYRMERP 232
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 283
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
E+ V ++ + C +RP+ E+ E + S
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI 131
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 132 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I+ + ++++++ R
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPG----------------IDPSQVYELLEKDYRMERP 232
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 134
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 135 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 238
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 239 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 286
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 134
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 135 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 238
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 239 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 286
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 140
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 141 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 196
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 197 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 256
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 257 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 297
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 135
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 136 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 239
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 240 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 287
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 135
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 136 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 239
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 240 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 287
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 138
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 139 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 242
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 243 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 290
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 142
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 143 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 198
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 199 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 258
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 259 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 299
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 32/289 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 153
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSS 250
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G + PE S
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 251 QFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLFD 301
+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 271 ------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 141
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 142 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 197
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 198 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 257
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 258 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 298
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 135
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 136 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 239
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 240 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 287
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 32/289 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSS 250
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G + PE S
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 251 QFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLFD 301
+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 253 ------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 32/289 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 153
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSS 250
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G + PE S
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 251 QFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLFD 301
+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 271 ------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 138
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 194
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 255 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 146
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 147 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 250
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 251 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 298
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 138
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 139 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 242
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
E+ V ++ + C +RP+ E+ E + S
Sbjct: 243 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 191
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 252 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 135
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 191
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 252 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 139
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 140 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 195
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 196 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 255
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 256 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 134
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 135 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 190
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 191 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 250
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 251 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI--KLLQYTSQICKGMEYLGTKRY 138
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 194
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 255 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 26/292 (8%)
Query: 76 MNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LLG
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
C ++ EF+ G L YL + +E+S + L +AT+++ A+ YL ++
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKKNFI- 340
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HR++ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 341 --HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 255 KSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEA 313
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGCP 445
Query: 314 EEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 446 EK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 492
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
E+ V ++ + C +RP+ E+ E + S
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 23/275 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 133
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 134 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 237
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
E+ V ++ + C +RP+ E+ E +
Sbjct: 238 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 23/275 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 138
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 139 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 242
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
E+ V ++ + C +RP+ E+ E +
Sbjct: 243 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 32/289 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 136
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSS 250
+ HR++ + NIL++ + R KI DFG ++ + D+ + K G + PE S
Sbjct: 137 I---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 251 QFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLFD 301
+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 253
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
R G +EI + C N+ RP+ +++A+ +++IR N
Sbjct: 254 ------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDN 293
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 23/275 (8%)
Query: 75 NMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI 138
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
HRD+ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 139 ---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGE 312
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGC 242
Query: 313 AEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
E+ V ++ + C +RP+ E+ E +
Sbjct: 243 PEK---VYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 34/288 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 166
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 167 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 222
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIR 348
R G +EI + C N+ RP+ +++A+ +++IR
Sbjct: 283 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 34/288 (11%)
Query: 80 LGQGGQGTV----YKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V Y + + G ++AVKK + E L +F E+ IL + H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G C L+ E++P G+L YL E + L+ +++ + + YL + Y
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKRY 133
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRS 249
+ HRD+ + NIL++ + R KI DFG ++ + D+ K G F Y PE
Sbjct: 134 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 189
Query: 250 SQFTDKSDVYSFGVVLVELLT----GQKPISSIWA-----NEGRNLTTYFVECIEENCLF 300
S+F+ SDV+SFGVVL EL T + P + +G+ + + +E ++ N
Sbjct: 190 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 249
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIR 348
R G +EI + C N+ RP+ +++A+ +++IR
Sbjct: 250 P------RPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 144/292 (49%), Gaps = 26/292 (8%)
Query: 76 MNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LLG
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI- 337
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HR++ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 338 --HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 255 KSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEA 313
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGCP 442
Query: 314 EEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E+ V ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 443 EK---VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 489
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 26/292 (8%)
Query: 76 MNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
M LG G G VY+G+ + K+ D ++EEF+ E ++ +I H N+V+LLG
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
C ++ EF+ G L YL + +E++ + L +AT+++ A+ YL ++
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFI- 379
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HR++ + N L+ E + K+ADFG SR + D + + PE ++F+
Sbjct: 380 --HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 255 KSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEA 313
KSDV++FGV+L E+ T G P I +L+ + E +E++ + R G
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGI------DLSQVY-ELLEKDYRME------RPEGCP 484
Query: 314 EEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI-RANSRDDENNIQKCYGK 364
E++ ++ + C +RP+ E+ E + + +S DE ++K GK
Sbjct: 485 EKVY---ELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE--VEKELGK 531
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 153/308 (49%), Gaps = 44/308 (14%)
Query: 58 RCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKS-KVVDESKLE-- 113
+ RI EL + ++LG G GTVYKG+ + +G + + + K+++E+
Sbjct: 31 QLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 83
Query: 114 --EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
EF++E +I++ ++H ++V+LLG CL + LV + +P+G L +Y+H+ + + +
Sbjct: 84 NVEFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGS--Q 140
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+ L ++A+ + YL + HRD+ + N+L+ KI DFG +R + D+
Sbjct: 141 LLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
Query: 232 ST---KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLT 287
+ K+ + L+ ++R +FT +SDV+S+GV + EL+T G KP I E
Sbjct: 198 NADGGKMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----- 250
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ D+++ R + V V +C +RP KE+A E R+
Sbjct: 251 -----------IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
Query: 348 RANSRDDE 355
+RD +
Sbjct: 300 ---ARDPQ 304
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 22/238 (9%)
Query: 54 GSIDRCRIFNSKELDKATDY------FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVV 107
GS DR R+ D + D+ + + +G G GTVYKG + +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYE 164
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFE 130
Query: 165 ELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG-TSRS 223
+ L + IA + A+ + YLH+ + I HRD+KS NI L E KI DFG +
Sbjct: 131 MIKL-----IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEK 182
Query: 224 IAIDQTHVSTKVQGTFGYLDPEYFR---SSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+H ++ G+ ++ PE R + ++ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 151/305 (49%), Gaps = 41/305 (13%)
Query: 58 RCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKS-KVVDESKLE-- 113
+ RI EL + ++LG G GTVYKG+ + +G + + + K+++E+
Sbjct: 8 QLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 114 --EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
EF++E +I++ ++H ++V+LLG CL + LV + +P+G L +Y+H+ + + +
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGS--Q 117
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+ L ++A+ + YL + HRD+ + N+L+ KI DFG +R + D+
Sbjct: 118 LLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
Query: 232 ST---KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLT 287
+ K+ + L+ ++R +FT +SDV+S+GV + EL+T G KP I E
Sbjct: 175 NADGGKMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----- 227
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ D+++ R + V V +C +RP KE+A E R+
Sbjct: 228 -----------IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
Query: 348 RANSR 352
+ +
Sbjct: 277 ARDPQ 281
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 22/238 (9%)
Query: 54 GSIDRCRIFNSKELDKATDY------FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVV 107
GS DR R+ D + D+ + + +G G GTVYKG + +
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP 71
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYE 164
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +E
Sbjct: 72 TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFE 130
Query: 165 ELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI 224
+ L + IA + A+ + YLH+ + I HRD+KS NI L E KI DFG +
Sbjct: 131 MIKL-----IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
Query: 225 A-IDQTHVSTKVQGTFGYLDPEYFR---SSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+ +H ++ G+ ++ PE R + ++ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 33/278 (11%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ + V ++ +L+ +LH E + + IA + A + YLH+ + I HRD
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 200 IKSTNILLDEKYRAKIADFG-TSRSIAIDQTHVSTKVQGTFGYLDPEYFR---SSQFTDK 255
+KS NI L E KI DFG + +H ++ G+ ++ PE R S+ ++ +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 256 SDVYSFGVVLVELLTGQKPISSIWANE------GRNLTTYFVECIEENCLFDIIDDQVRK 309
SDVY+FG+VL EL+TGQ P S+I + GR + + + NC
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC----------- 254
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ +MA CL RP+ + E+E +
Sbjct: 255 PKRMKRLMA------ECLKKKRDERPSFPRILAEIEEL 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 54 GSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE 113
GS ++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 114 --------EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEE 165
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 166 L-------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADF 218
+ + +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDF 176
Query: 219 GTSRSIA-IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
G +R I D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 177 GMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ +V ++ +L+ +LH E + + IA + A + YLH+ + I HRD
Sbjct: 92 PQL-AIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 145
Query: 200 IKSTNILLDEKYRAKIADFG-TSRSIAIDQTHVSTKVQGTFGYLDPEYFR---SSQFTDK 255
+KS NI L E KI DFG + +H ++ G+ ++ PE R S+ ++ +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 256 SDVYSFGVVLVELLTGQKPISSIWANE------GRNLTTYFVECIEENCLFDIIDDQVRK 309
SDVY+FG+VL EL+TGQ P S+I + GR + + + NC
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC----------- 254
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ +MA CL RP+ + E+E +
Sbjct: 255 PKRMKRLMA------ECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ + V ++ +L+ +LH E + + IA + A + YLH+ + I HRD
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRD 133
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQFTDK 255
+KS NI L E KI DFG + + +H ++ G+ ++ PE R S+ ++ +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 256 SDVYSFGVVLVELLTGQKPISSIWANE------GRNLTTYFVECIEENCLFDIIDDQVRK 309
SDVY+FG+VL EL+TGQ P S+I + GR + + + NC
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC----------- 242
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ +MA CL RP+ + E+E +
Sbjct: 243 PKRMKRLMA------ECLKKKRDERPSFPRILAEIEEL 274
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 28/239 (11%)
Query: 76 MNRILGQGGQGTVYKGML------ADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRN 129
+ R LG+G G V+ D ++AVK K ++ ++F E +L+ + H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEEL--------SLTWEMRLRIATE 179
+VK G C+E + ++V+E++ +G L ++L H P L LT L IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGT 238
+A + YL S ++ HRD+ + N L+ E KI DFG SR + + D V
Sbjct: 137 IAAGMVYLASQHFV---HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEE 296
++ PE +FT +SDV+S GVVL E+ T G++P + NE +ECI +
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIECITQ 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%), Gaps = 39/285 (13%)
Query: 77 NRILGQGGQGTVYKGMLAD---GRI-IAVKK-SKVVDESKLEEFINEVVILSQINHRNVV 131
+R++G+G G VY G D RI A+K S++ + ++E F+ E +++ +NH NV+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 132 KLLGCCLEVE-VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
L+G L E +P ++ ++ +G L Q++ P + + T + + +VA + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID------QTHVSTKVQGTFGYLDP 244
++ HRD+ + N +LDE + K+ADFG +R I +D Q H ++ + L
Sbjct: 144 KFV---HRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTAL-- 197
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDII 303
E ++ +FT KSDV+SFGV+L ELLT G P I + +LT +
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI---DPFDLTHFLA------------ 242
Query: 304 DDQVRKSGEAEEIM-AVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
Q R+ + E ++ V ++C + RPT + + E+E+I
Sbjct: 243 --QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 22/235 (9%)
Query: 57 DRCRIFNSKELDKATDY------FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDES 110
DR R+ D + D+ + + +G G GTVYKG + +
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS 167
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +E +
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK 125
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG-TSRSIAI 226
L + IA + A+ + YLH+ + I HRD+KS NI L E KI DFG +
Sbjct: 126 L-----IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 177
Query: 227 DQTHVSTKVQGTFGYLDPEYFR---SSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+H ++ G+ ++ PE R + ++ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 54 GSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE 113
GS ++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 114 --------EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEE 165
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 166 L-------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADF 218
+ + +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDF 176
Query: 219 GTSRSI-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
G +R I D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 177 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 55 SIDRCRIFNSKELDKATDY------FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD 108
S DR R+ D + D+ + + +G G GTVYKG + +
Sbjct: 12 SEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 71
Query: 109 ESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEE 165
+L+ F NEV +L + H N++ +G + ++ + V ++ +L+ +LH +E
Sbjct: 72 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM 130
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA 225
+ L + IA + A+ + YLH+ + I HRD+KS NI L E KI DFG + +
Sbjct: 131 IKL-----IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
Query: 226 -IDQTHVSTKVQGTFGYLDPEYFR---SSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+H ++ G+ ++ PE R + ++ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 20/208 (9%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--KLEEFINEVVILSQINHRNVVKLLGCC 137
+G G GTVYKG +AVK KVVD + + + F NEV +L + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ + + V ++ +L+++LH +E + IA + A+ + YLH+ I H
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIH 155
Query: 198 RDIKSTNILLDEKYRAKIADFG----TSRSIAIDQTHVSTKVQGTFGYLDPEYFR---SS 250
RD+KS NI L E KI DFG SR Q T G+ ++ PE R ++
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNN 212
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPISSI 278
F+ +SDVYS+G+VL EL+TG+ P S I
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K + S+ E+FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV+EF+ +G L YL + E L + +V E +AYL ++ + HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRD 128
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 189 SFGVLMWEVFSEGKIP 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 39/288 (13%)
Query: 80 LGQGGQGTVY----KGMLA--DGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
LG+G G V+ +L D ++AVK K ES ++F E +L+ + H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEEL----------SLTWEMRLRIATEVA 181
G C E L+V+E++ +G L ++L H P +L L L +A++VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGTFG 240
+ YL A L HRD+ + N L+ + KI DFG SR I + D V +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCL 299
++ PE +FT +SDV+SFGVVL E+ T G++P + E ++CI +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-------IDCITQGRE 278
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ R E+ A + + C + R ++K+V L+ +
Sbjct: 279 LE------RPRACPPEVYA---IMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 39/288 (13%)
Query: 80 LGQGGQGTVY----KGMLA--DGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
LG+G G V+ +L D ++AVK K ES ++F E +L+ + H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEEL----------SLTWEMRLRIATEVA 181
G C E L+V+E++ +G L ++L H P +L L L +A++VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGTFG 240
+ YL A L HRD+ + N L+ + KI DFG SR I + D V +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCL 299
++ PE +FT +SDV+SFGVVL E+ T G++P + E ++CI +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-------IDCITQGRE 249
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ R E+ A + + C + R ++K+V L+ +
Sbjct: 250 LE------RPRACPPEVYA---IMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K + S+ E+FI E ++ +++H +V+L G CLE
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV+EF+ +G L YL + E L + +V E +AYL + + HRD
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 192 SFGVLMWEVFSEGKIP 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K + S+ E+FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV+EF+ +G L YL + E L + +V E +AYL + + HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 189 SFGVLMWEVFSEGKIP 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 126
Query: 197 HRDIKSTNILLDEKYRAKIADFG-TSRSIAIDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + +H ++ G+ ++ PE R + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
+F E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 39/288 (13%)
Query: 80 LGQGGQGTVY----KGMLA--DGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
LG+G G V+ +L D ++AVK K ES ++F E +L+ + H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEEL----------SLTWEMRLRIATEVA 181
G C E L+V+E++ +G L ++L H P +L L L +A++VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGTFG 240
+ YL A L HRD+ + N L+ + KI DFG SR I + D V +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCL 299
++ PE +FT +SDV+SFGVVL E+ T G++P + E ++CI +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-------IDCITQGRE 255
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ R E+ A + + C + R ++K+V L+ +
Sbjct: 256 LE------RPRACPPEVYA---IMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K K S+ ++FI E ++ +++H +V+L G CLE
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV+EF+ +G L YL + E L + +V E +AYL + + HRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 209 SFGVLMWEVFSEGKIP 224
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K + S+ E+FI E ++ +++H +V+L G CLE
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV+EF+ +G L YL + E L + +V E +AYL + + HRD
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 187 SFGVLMWEVFSEGKIP 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 131
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + + +H ++ G+ ++ PE R + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 131
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + + +H ++ G+ ++ PE R + +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 66 ELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE--------EFIN 117
E + A + M+R LGQG G VY+G +A G + +++V ++ E EF+N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL-------SLTW 170
E ++ + N +VV+LLG + + L++ E + G L YL E+ +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQT 229
+++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I D
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + + +H ++ G+ ++ PE R + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 128
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + + +H ++ G+ ++ PE R + +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 138/300 (46%), Gaps = 54/300 (18%)
Query: 74 FNMNRILGQGGQGTVYKGMLA--DGRIIAVK----KSKVVDESKLEEFINEVVILSQINH 127
F + R+LG+G G+V + L DG + V K+ ++ S +EEF+ E + + +H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYL------HDPYEELSLTWEMRLR 175
+V KL+G L + +P+++ F+ +G L +L +P+ +L + +R
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF---NLPLQTLVR 141
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTK 234
++A + YL S ++ HRD+ + N +L E +ADFG SR I + D
Sbjct: 142 FMVDIACGMEYLSSRNFI---HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE------GRNLT 287
+ +L E + +T SDV++FGV + E++T GQ P + I E G N
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL 258
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
EC+EE V D+ +C ++ + RP+ + MELE I
Sbjct: 259 KQPPECMEE----------------------VYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 26/275 (9%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
++L G+G ML D R V + +++ + F+ E +++Q+ H N+V+LLG
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 138 LEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+E + L +V E++ G+L YL + L + L+ + +V EA+ YL + ++
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 311
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+ + N+L+ E AK++DFG ++ + Q V+ T PE R +F+ KS
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 367
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E+ + G+ P I + V +E+ D D
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPDGCPP------- 413
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
AV DV K C + RPT ++ +LE IR +
Sbjct: 414 --AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G GTVYKG + + +L+ F NEV +L + H N++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 140 VEVPLLVYEFIPNGTLFQYLH---DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
++ + V ++ +L+ +LH +E + L + IA + A+ + YLH+ + I
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAKS---II 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIA-IDQTHVSTKVQGTFGYLDPEYFR---SSQF 252
HRD+KS NI L E KI DFG + + +H ++ G+ ++ PE R + +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 253 TDKSDVYSFGVVLVELLTGQKPISSI 278
+ +SDVY+FG+VL EL+TGQ P S+I
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
+G G G V+ G + +A+K + S+ E+FI E ++ +++H +V+L G CLE
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
LV EF+ +G L YL + E L + +V E +AYL + + HRD
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L+ E K++DFG +R + DQ ST + + PE F S+++ KSDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 260 SFGVVLVELLT-GQKP 274
SFGV++ E+ + G+ P
Sbjct: 190 SFGVLMWEVFSEGKIP 205
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 66 ELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE--------EFIN 117
E + A + M+R LGQG G VY+G +A G + +++V ++ E EF+N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL-------SLTW 170
E ++ + N +VV+LLG + + L++ E + G L YL E+ +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQT 229
+++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I D
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 118
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 228 FTFPDFVTEGAR------------DLISRLLKHNPSQRPXLREV-LEHPWITANSSKPSN 274
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 133/303 (43%), Gaps = 37/303 (12%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINE 118
K+ A + F + R LG+G G VY + I KV+ +++LE + E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRRE 59
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-A 177
V I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYI 115
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSG 169
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEEN 297
T YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEF 224
Query: 298 CLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDENN 357
D + + R D+ R L RP ++EV +E I ANS N+
Sbjct: 225 TFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSNS 271
Query: 358 IQK 360
K
Sbjct: 272 QNK 274
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 118
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 228 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 274
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL------ 166
EF+NE ++ + N +VV+LLG + + L++ E + G L YL E+
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 167 -SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N + E + KI DFG +R I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 118
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLC 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 228 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 58
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 114
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 115 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLC 168
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 223
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 224 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 116
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 170
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 226 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 272
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 83
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 139
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 140 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 193
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 248
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 249 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS----- 167
EF+NE ++ + N +VV+LLG + + L++ E + G L YL ++
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 168 --LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 17 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 74
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 130
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 131 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 184
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 239
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 240 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------- 113
++ E + A + M+R LGQG G VY+G +A G + +++V ++ E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 114 -EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS----- 167
EF+NE ++ + N +VV+LLG + + L++ E + G L YL ++
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 168 --LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
+ +++A E+A+ +AYL+++ ++ HRD+ + N ++ E + KI DFG +R I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T++ GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
+ + R D+ R L RP ++EV +E I ANS N
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P G +++ L ++LS E R
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATY 118
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 228 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D Y +I GQG GTVY M +A G+ +A+++ + + K E INE++++ +
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
+ N+V L L + +V E++ G+L D E + + E +AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS+ + HRDIKS NILL K+ DFG I +Q+ ST V GT ++ PE
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEV 187
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ K D++S G++ +E++ G+ P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
+ + R D+ R L RP ++EV +E I ANS N
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 116
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLC 170
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
D + + R D+ R L RP ++EV +E I ANS
Sbjct: 226 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 130/300 (43%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P G +++ L ++LS E R
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATY 118
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + +
Sbjct: 119 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLX 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 227
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 228 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 274
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
+ + R D+ R L RP ++EV +E I ANS N
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 58
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 114
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + + T +
Sbjct: 115 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-LC 168
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 223
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 224 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
+ + R D+ R L RP ++EV +E I ANS N
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 116
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIA+FG S + T +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLC 170
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 226 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 131/300 (43%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 59
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 115
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + +
Sbjct: 116 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLC 169
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 224
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 225 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 271
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 59
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 115
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIA+FG S + T +
Sbjct: 116 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLC 169
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 224
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
D + + R D+ R L RP ++EV +E I ANS N
Sbjct: 225 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 132/304 (43%), Gaps = 45/304 (14%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 83
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 139
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S H + +
Sbjct: 140 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRR 189
Query: 237 ----GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT YL PE +K D++S GV+ E L G+ P + E TY
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRI 244
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
E D + + R D+ R L RP ++EV +E I ANS
Sbjct: 245 SRVEFTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSS 291
Query: 353 DDEN 356
N
Sbjct: 292 KPSN 295
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 26/275 (9%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
++L G+G ML D R V + +++ + F+ E +++Q+ H N+V+LLG
Sbjct: 24 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 138 LEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+E + L +V E++ G+L YL + L + L+ + +V EA+ YL + ++
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 139
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+ + N+L+ E AK++DFG ++ + Q V+ T PE R +F+ KS
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 195
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E+ + G+ P I + V +E+ D D
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPDGCPP------- 241
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
AV +V K C + RP+ ++ +LE I+ +
Sbjct: 242 --AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 26/275 (9%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
++L G+G ML D R V + +++ + F+ E +++Q+ H N+V+LLG
Sbjct: 15 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 138 LEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+E + L +V E++ G+L YL + L + L+ + +V EA+ YL + ++
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 130
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+ + N+L+ E AK++DFG ++ + Q V+ T PE R + F+ KS
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKS 186
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E+ + G+ P I + V +E+ D D
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPDGCPP------- 232
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
AV +V K C + RP+ ++ +LE I+ +
Sbjct: 233 --AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 143
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 204 SFGILLTEIVT 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 135
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 196 SFGILLTEIVTHGRIP 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 136
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 197 SFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 123
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 232
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 233 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 268
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 142
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 203 SFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 140
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 201 SFGILLTEIVT 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I + + + PE FT KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 264
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D Y +I GQG GTVY M +A G+ +A+++ + + K E INE++++ +
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
+ N+V L L + +V E++ G+L D E + + E +AL +
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEF 132
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS+ + HR+IKS NILL K+ DFG I +Q+ ST V GT ++ PE
Sbjct: 133 LHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEV 188
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ K D++S G++ +E++ G+ P
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 118
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 172
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 227
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 228 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 134
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 195 SFGILLTEIVTHGRIP 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D Y +I GQG GTVY M +A G+ +A+++ + + K E INE++++ +
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
+ N+V L L + +V E++ G+L D E + + E +AL +
Sbjct: 77 NPNIVNYLDSYLVGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEF 132
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS+ + HRDIKS NILL K+ DFG I +Q+ S V GT ++ PE
Sbjct: 133 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEV 188
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ K D++S G++ +E++ G+ P
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + + GT YL
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 176
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 231
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
+ + R D+ R L RP ++EV +E I ANS N
Sbjct: 232 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANSSKPSN 272
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D Y +I GQG GTVY M +A G+ +A+++ + + K E INE++++ +
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
+ N+V L L + +V E++ G+L D E + + E +AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS+ + HRDIKS NILL K+ DFG I +Q+ S V GT ++ PE
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEV 187
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ K D++S G++ +E++ G+ P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 129
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 190 SFGILLTEIVTHGRIP 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 135/275 (49%), Gaps = 26/275 (9%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
++L G+G ML D R V + +++ + F+ E +++Q+ H N+V+LLG
Sbjct: 9 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 138 LEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+E + L +V E++ G+L YL + L + L+ + +V EA+ YL + ++
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFV--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+ + N+L+ E AK++DFG ++ + Q V+ T PE R +F+ KS
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E+ + G+ P I + V +E+ D D
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYKMDAPDGCPP------- 226
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
AV +V K C + RP+ ++ +LE I+ +
Sbjct: 227 --AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 259
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 200 SFGILLTEIVT 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 77 NRILGQGGQGTVYKGML--ADGR---IIAVKKSKV-VDESKLEEFINEVVILSQINHRNV 130
+++G G G VYKGML + G+ +A+K K E + +F+ E I+ Q +H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
++L G + + +++ E++ NG L ++L + E S+ + + +A + YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL--QLVGMLRGIAAGMKYLANM 166
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFR 248
Y+ HRD+ + NIL++ K++DFG SR + D T G + PE
Sbjct: 167 NYV---HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 249 SSQFTDKSDVYSFGVVLVELLT-GQKP 274
+FT SDV+SFG+V+ E++T G++P
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 140
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 201 SFGILLTEIVT 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 10/208 (4%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D Y +I GQG GTVY M +A G+ +A+++ + + K E INE++++ +
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
+ N+V L L + +V E++ G+L D E + + E +AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSL----TDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS+ + HRDIKS NILL K+ DFG I +Q+ S V GT ++ PE
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEV 187
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ K D++S G++ +E++ G+ P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 130/295 (44%), Gaps = 37/295 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFIN 117
SK+ A + F + R LG+G G VY + I KV+ +++LE +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRR 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI- 176
EV I S + H N+++L G + L+ E+ P GT+++ L ++LS E R
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATY 116
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
TE+A AL+Y HS + HRDIK N+LL KIADFG S + +
Sbjct: 117 ITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLC 170
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEE 296
GT YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVE 225
Query: 297 NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
D + + R D+ R L RP ++EV +E I ANS
Sbjct: 226 FTFPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HRD
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRD 144
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 260 SFGVVLVELLT 270
SFG++L E++T
Sbjct: 205 SFGILLTEIVT 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 145
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 206 AFGVLMWEIYSLGKMP 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 136
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 197 AFGVLMWEIYSLGKMP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 130
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 191 AFGVLMWEIYSLGKMP 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 116
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + T + GT YL
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 170
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 225
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 226 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 261
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 129
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 190 AFGVLMWEIYSLGKMP 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 145
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 206 AFGVLMWEIYSLGKMP 221
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 20/204 (9%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKS-KVV------DESKLEEFINEVVILSQINHRNVVK 132
LG GG TVY LA+ I+ +K + K + E L+ F EV SQ++H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
++ E + LV E+I TL +Y+ H P L+ + + ++ + + + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-----LSVDTAINFTNQILDGIKHAHD- 129
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS 250
+ I HRDIK NIL+D KI DFG +++++ + V GT Y PE +
Sbjct: 130 --MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 251 QFTDKSDVYSFGVVLVELLTGQKP 274
+ +D+YS G+VL E+L G+ P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 130
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 191 AFGVLMWEIYSLGKMP 206
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 23/241 (9%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D N+ + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PYEEL 166
++E+ IL I H NVV LLG C + PL+V EF G L YL PY++L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 167 S---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 224 IAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I D +V + ++ PE +T +SDV+SFGV+L E+ + G P + +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 282 E 282
E
Sbjct: 254 E 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +A+K K S+ +EFI E ++ ++H +V+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
++ E++ NG L YL + + L + +V EA+ YL S +L HRD
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---HRD 125
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + N L++++ K++DFG SR + D+ S + + PE S+F+ KSD++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 260 SFGVVLVELLT-GQKP 274
+FGV++ E+ + G+ P
Sbjct: 186 AFGVLMWEIYSLGKMP 201
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 25/277 (9%)
Query: 80 LGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVVKLLGCC 137
+G+G G V+ G L AD ++AVK + L+ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ + +V E + G +L E L + L++ + A + YL S + H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCCI---H 236
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV-QGTFGYLDPEYFRSSQFTDKS 256
RD+ + N L+ EK KI+DFG SR A S + Q + PE +++ +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E + G P + N T FVE ++ D
Sbjct: 297 DVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPD---------- 342
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
AV + ++C RP+ + EL+ IR R
Sbjct: 343 --AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 31/243 (12%)
Query: 76 MNRILGQGGQGTVYKG------MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRN 129
+ R LG+G G V+ D ++AVK K + ++F E +L+ + H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMR-----------LRI 176
+VK G C + + ++V+E++ +G L ++L H P + + + R L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKV 235
A+++A + YL S ++ HRD+ + N L+ KI DFG SR + + D V
Sbjct: 139 ASQIASGMVYLASQHFV---HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECI 294
++ PE +FT +SDV+SFGV+L E+ T G++P + E +ECI
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------VIECI 248
Query: 295 EEN 297
+
Sbjct: 249 TQG 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 130/289 (44%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + + GT YL
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P AN ++ TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQD--TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILSQINH 127
F++ R LG+G G VY + I KV+ +++LE + EV I S + H
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
N+++L G + L+ E+ P GT+++ L ++LS E R TE+A AL+Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSY 127
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
HS + HRDIK N+LL KIADFG S + T + GT YL PE
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEM 181
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQ 306
+K D++S GV+ E L G P + E TY E D + +
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE-----TYRRISRVEFTFPDFVTEG 236
Query: 307 VRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
R D+ R L R T+ EV +E I+ANS
Sbjct: 237 AR------------DLISRLLKHNASQRLTLAEV-LEHPWIKANS 268
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 127/289 (43%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 264
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
+F E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA 225
EM +++A E+A+ +AYL++ ++ HRD+ + N ++ + KI DFG +R I
Sbjct: 123 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 226 -IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG 283
D K ++ PE + FT SD++SFGVVL E+ + ++P + +NE
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE- 236
Query: 284 RNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
++ + + D D+ + V+D+ + C + RPT E+
Sbjct: 237 -----QVLKFVMDGGYLDQPDNCPER---------VTDLMRMCWQFNPKMRPTFLEI 279
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 23/241 (9%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D N+ + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PYEEL 166
++E+ IL I H NVV LLG C + PL+V EF G L YL PY++L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 167 S---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARD 193
Query: 224 IAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I D +V + ++ PE +T +SDV+SFGV+L E+ + G P + +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 282 E 282
E
Sbjct: 254 E 254
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 7/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +AVK K S + F+ E ++ Q+ H+ +V+L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ ++ E++ NG+L +L P + LT L +A ++AE +A++ Y+ HR+
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRN 130
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ + KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 191 SFGILLTEIVTHGRIP 206
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 126/277 (45%), Gaps = 25/277 (9%)
Query: 80 LGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVVKLLGCC 137
+G+G G V+ G L AD ++AVK + L+ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ + +V E + G +L E L + L++ + A + YL S + H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKCCI---H 236
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV-QGTFGYLDPEYFRSSQFTDKS 256
RD+ + N L+ EK KI+DFG SR A S + Q + PE +++ +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 257 DVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEE 315
DV+SFG++L E + G P + N T FVE ++ D
Sbjct: 297 DVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPD---------- 342
Query: 316 IMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
AV + ++C RP+ + EL+ IR R
Sbjct: 343 --AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 127/289 (43%), Gaps = 37/289 (12%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
AL+Y HS + HRDIK N+LL KIADFG S + + GT YL
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 173
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI 302
PE +K D++S GV+ E L G+ P + E TY E D
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFTFPDF 228
Query: 303 IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ + R D+ R L RP ++EV +E I ANS
Sbjct: 229 VTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 128/293 (43%), Gaps = 45/293 (15%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILS 123
A + F + R LG+G G VY + I KV+ +++LE + EV I S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILA--LKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAE 182
+ H N+++L G + L+ E+ P GT+++ L ++LS E R TE+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ----GT 238
AL+Y HS + HRDIK N+LL KIADFG S H + + GT
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENC 298
YL PE +K D++S GV+ E L G+ P + E TY E
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKRISRVEFT 227
Query: 299 LFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
D + + R D+ R L RP ++EV +E I ANS
Sbjct: 228 FPDFVTEGAR------------DLISRLLKHNPSQRPMLREV-LEHPWITANS 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 76 MNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVILSQINHR 128
+NRILG+G G VY+G+ + + + KK +D E+F++E VI+ ++H
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 73
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
++VKL+G +E E ++ E P G L YL L + + + ++ +A+AYL
Sbjct: 74 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLE 130
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S + HRDI NIL+ K+ DFG SR I + + ++ + ++ PE
Sbjct: 131 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 249 SSQFTDKSDVYSFGVVLVELLT-GQKP 274
+FT SDV+ F V + E+L+ G++P
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
+F E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA 225
EM +++A E+A+ +AYL++ ++ HRD+ + N ++ + KI DFG +R I
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 226 -IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG 283
D K ++ PE + FT SD++SFGVVL E+ + ++P + +NE
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE- 239
Query: 284 RNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
++ + + D D+ + V+D+ + C + RPT E+
Sbjct: 240 -----QVLKFVMDGGYLDQPDNCPER---------VTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 76 MNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVILSQINHR 128
+NRILG+G G VY+G+ + + + KK +D E+F++E VI+ ++H
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 69
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
++VKL+G +E E ++ E P G L YL L + + + ++ +A+AYL
Sbjct: 70 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLE 126
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S + HRDI NIL+ K+ DFG SR I + + ++ + ++ PE
Sbjct: 127 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 249 SSQFTDKSDVYSFGVVLVELLT-GQKP 274
+FT SDV+ F V + E+L+ G++P
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 76 MNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVILSQINHR 128
+NRILG+G G VY+G+ + + + KK +D E+F++E VI+ ++H
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 85
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
++VKL+G +E E ++ E P G L YL L + + + ++ +A+AYL
Sbjct: 86 HIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKAMAYLE 142
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S + HRDI NIL+ K+ DFG SR I + + ++ + ++ PE
Sbjct: 143 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 249 SSQFTDKSDVYSFGVVLVELLT-GQKP 274
+FT SDV+ F V + E+L+ G++P
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 21/222 (9%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLA-DGR---IIAVKKSKV-VDESKLEEFINE 118
+KELD + + R++G G G V G L G+ +A+K KV E + +F+ E
Sbjct: 37 AKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HD-PYEELSLTWEMRLR 175
I+ Q +H NVV L G + ++V EF+ NG L +L HD + + L +R
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR-- 152
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR I D V T
Sbjct: 153 ---GIAAGMRYLADMGYV---HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 48/311 (15%)
Query: 72 DYFNMNRILGQGGQGTVYK----GMLAD--GRI--IAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V G+ D R+ +AVK K E L + I+E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPYEEL 166
I H+N++ LLG C + ++ E+ G L +YL H+P E+L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 167 SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-A 225
S + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R I
Sbjct: 148 SS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 226 IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGR 284
ID +T + ++ PE +T +SDV+SFGV+L E+ T G P + E
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 260
Query: 285 NLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMEL 344
LF ++ + R + + + + C ++ RPT K++ +L
Sbjct: 261 --------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 345 ERIRANSRDDE 355
+RI A + + E
Sbjct: 307 DRIVALTSNQE 317
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 54/314 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG---------RI--IAVKKSKV-VDESKLEEFINEV 119
D + + LG+G G V +LA+ R+ +AVK K E L + I+E+
Sbjct: 69 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 120 VILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPY 163
++ I H+N++ LLG C + ++ E+ G L +YL H+P
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
E+LS + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R
Sbjct: 186 EQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 224 I-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I ID +T + ++ PE +T +SDV+SFGV+L E+ T G P +
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300
Query: 282 EGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVA 341
E LF ++ + R + + + + C ++ RPT K++
Sbjct: 301 E----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
Query: 342 MELERIRANSRDDE 355
+L+RI A + + E
Sbjct: 345 EDLDRIVALTSNQE 358
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L D R +AVK + D S F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV--STKVQGTF 239
+AL + H + I HRD+K NIL+ K+ DFG +R+IA V + V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPVSVAYQHVRE--- 234
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 37/285 (12%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE------EFINEVVILSQINH 127
F++ R LG+G G VY + I KV+ +++LE + EV I S + H
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILA--LKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
N+++L G + L+ E+ P GT+++ L ++LS E R TE+A AL+Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSY 127
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
HS + HRDIK N+LL KIADFG S+ + T + GT YL PE
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRDT-LCGTLDYLPPEM 181
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQ 306
+K D++S GV+ E L G P + E TY E D + +
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE-----TYRRISRVEFTFPDFVTEG 236
Query: 307 VRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
R D+ R L R T+ EV +E I+ANS
Sbjct: 237 AR------------DLISRLLKHNASQRLTLAEV-LEHPWIKANS 268
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
+F E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
EM +++A E+A+ +AYL++ ++ HRD+ + N ++ + KI DFG +R I
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG 283
D K ++ PE + FT SD++SFGVVL E+ + ++P + +NE
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE- 239
Query: 284 RNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
++ + + D D+ + V+D+ + C + RPT E+
Sbjct: 240 -----QVLKFVMDGGYLDQPDNCPER---------VTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 48/311 (15%)
Query: 72 DYFNMNRILGQGGQGTVYK----GMLAD--GRI--IAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V G+ D R+ +AVK K E L + I+E+ ++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPYEEL 166
I H+N++ LLG C + ++ E+ G L +YL H+P E+L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 167 SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-A 225
S + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R I
Sbjct: 133 SS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHH 187
Query: 226 IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGR 284
ID +T + ++ PE +T +SDV+SFGV+L E+ T G P + E
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 245
Query: 285 NLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMEL 344
LF ++ + R + + + + C ++ RPT K++ +L
Sbjct: 246 --------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
Query: 345 ERIRANSRDDE 355
+RI A + + E
Sbjct: 292 DRIVALTSNQE 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 147/333 (44%), Gaps = 54/333 (16%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADG---------RI--IAV 101
G + + + D + + LG+G G V +LA+ R+ +AV
Sbjct: 1 GAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAV 57
Query: 102 KKSKV-VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL 159
K K E L + I+E+ ++ I H+N++ LLG C + ++ E+ G L +YL
Sbjct: 58 KMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
Query: 160 ---------------HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTN 204
H+P E+LS + + A +VA + YL S + HRD+ + N
Sbjct: 118 QARRPPGLEYSYNPSHNPEEQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARN 172
Query: 205 ILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGV 263
+L+ E KIADFG +R I ID +T + ++ PE +T +SDV+SFGV
Sbjct: 173 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 232
Query: 264 VLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDV 322
+L E+ T G P + E LF ++ + R + + +
Sbjct: 233 LLWEIFTLGGSPYPGVPVEE----------------LFKLLKEGHRMDKPSNCTNELYMM 276
Query: 323 AKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 355
+ C ++ RPT K++ +L+RI A + + E
Sbjct: 277 MRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 309
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 112/206 (54%), Gaps = 13/206 (6%)
Query: 80 LGQGGQGTVYKG---MLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLG 135
LG G G+V +G M +A+K K +++ EE + E I+ Q+++ +V+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
C + E +LV E G L ++L EE+ ++ + +V+ + YL ++
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEKNFV-- 132
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRSSQFT 253
HRD+ + N+LL ++ AKI+DFG S+++ D ++ + + G + + PE +F+
Sbjct: 133 -HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSI 278
+SDV+S+GV + E L+ GQKP +
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 48/311 (15%)
Query: 72 DYFNMNRILGQGGQGTVYK----GMLAD--GRI--IAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V G+ D R+ +AVK K E L + I+E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPYEEL 166
I H+N++ LLG C + ++ E+ G L +YL H+P E+L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 167 SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-A 225
S + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R I
Sbjct: 148 SS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 226 IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGR 284
ID +T + ++ PE +T +SDV+SFGV+L E+ T G P + E
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 260
Query: 285 NLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMEL 344
LF ++ + R + + + + C ++ RPT K++ +L
Sbjct: 261 --------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
Query: 345 ERIRANSRDDE 355
+RI A + + E
Sbjct: 307 DRIVALTSNQE 317
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 54/314 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG---------RI--IAVKKSKV-VDESKLEEFINEV 119
D + + LG+G G V +LA+ R+ +AVK K E L + I+E+
Sbjct: 28 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 120 VILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPY 163
++ I H+N++ LLG C + ++ E+ G L +YL H+P
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
E+LS + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R
Sbjct: 145 EQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 224 I-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I ID +T + ++ PE +T +SDV+SFGV+L E+ T G P +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 282 EGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVA 341
E LF ++ + R + + + + C ++ RPT K++
Sbjct: 260 E----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 342 MELERIRANSRDDE 355
+L+RI A + + E
Sbjct: 304 EDLDRIVALTSNQE 317
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 54/314 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG---------RI--IAVKKSKV-VDESKLEEFINEV 119
D + + LG+G G V +LA+ R+ +AVK K E L + I+E+
Sbjct: 28 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 120 VILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPY 163
++ I H+N++ LLG C + ++ E+ G L +YL H+P
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
E+LS + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R
Sbjct: 145 EQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 224 I-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I ID +T + ++ PE +T +SDV+SFGV+L E+ T G P +
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
Query: 282 EGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVA 341
E LF ++ + R + + + + C ++ RPT K++
Sbjct: 260 E----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
Query: 342 MELERIRANSRDDE 355
+L+RI A + + E
Sbjct: 304 EDLDRIVALTSNQE 317
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 54/314 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG---------RI--IAVKKSKV-VDESKLEEFINEV 119
D + + LG+G G V +LA+ R+ +AVK K E L + I+E+
Sbjct: 21 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 77
Query: 120 VILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPY 163
++ I H+N++ LLG C + ++ E+ G L +YL H+P
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
E+LS + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R
Sbjct: 138 EQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 224 I-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I ID +T + ++ PE +T +SDV+SFGV+L E+ T G P +
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
Query: 282 EGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVA 341
E LF ++ + R + + + + C ++ RPT K++
Sbjct: 253 E----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
Query: 342 MELERIRANSRDDE 355
+L+RI A + + E
Sbjct: 297 EDLDRIVALTSNQE 310
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 32/266 (12%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVILSQINHRNVVKLLG 135
+G+G G V+KG+ D R V K++D E ++E+ E+ +LSQ + V K G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLH-DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
L+ ++ E++ G+ L P++E + ++ E+ + L YLHS +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-----EILKGLDYLHSEKKI- 142
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HRDIK+ N+LL E+ K+ADFG + + Q +T V GT ++ PE + S +
Sbjct: 143 --HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDS 199
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAE 314
K+D++S G+ +EL G+ P S + + F+ I +N ++ D +
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDM-----HPMRVLFL--IPKNNPPTLVGDFTK------ 246
Query: 315 EIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ + CLN RPT KE+
Sbjct: 247 ---SFKEFIDACLNKDPSFRPTAKEL 269
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 54/314 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG---------RI--IAVKKSKV-VDESKLEEFINEV 119
D + + LG+G G V +LA+ R+ +AVK K E L + I+E+
Sbjct: 17 DRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 73
Query: 120 VILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL---------------HDPY 163
++ I H+N++ LLG C + ++ E+ G L +YL H+P
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
E+LS + + A +VA + YL S + HRD+ + N+L+ E KIADFG +R
Sbjct: 134 EQLSS--KDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 224 I-AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWAN 281
I ID +T + ++ PE +T +SDV+SFGV+L E+ T G P +
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 248
Query: 282 EGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVA 341
E LF ++ + R + + + + C ++ RPT K++
Sbjct: 249 E----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
Query: 342 MELERIRANSRDDE 355
+L+RI A + + E
Sbjct: 293 EDLDRIVALTSNQE 306
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 27 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 142
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 143 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 21/222 (9%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 125
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 126 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
++ E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA 225
EM +++A E+A+ +AYL++ ++ HRD+ + N ++ + KI DFG +R I
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 226 -IDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SD++SFGVVL E+ +
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 138 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 126 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 132 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 141/300 (47%), Gaps = 47/300 (15%)
Query: 76 MNRILGQGGQGTVYKGMLA--DGRI--IAVKKSKVVDESK--LEEFINEVVILSQINHRN 129
+ +ILG+G G+V +G L DG +AVK K+ + S+ +EEF++E + +H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 130 VVKLLGCCLE-----VEVPLLVYEFIPNGTLFQYL----------HDPYEELSLTWEMRL 174
V++LLG C+E + P+++ F+ G L YL H P + L L
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-------L 150
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
+ ++A + YL + +L HRD+ + N +L + +ADFG S+ I + +
Sbjct: 151 KFMVDIALGMEYLSNRNFL---HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 235 V-QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVEC 293
+ + ++ E +T KSDV++FGV + E+ T R +T Y
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-------------RGMTPY--PG 252
Query: 294 IEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
++ + ++D + R + + + ++ C + +RPT + ++LE++ + D
Sbjct: 253 VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G +A+K K S E F+ E I+ ++ H +V+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L D E +L + +A +VA +AY+ Y+ HRD
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIERMNYI---HRD 130
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
++S NIL+ KIADFG +R I ++ + + PE +FT KSDV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 260 SFGVVLVELLT-GQKPISSI 278
SFG++L EL+T G+ P +
Sbjct: 191 SFGILLTELVTKGRVPYPGM 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 128 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 96 GRIIAVKKSKVVDE-SKLEEFINEVVILSQINHRNVVKLLGCCLEV--EVPLLVYEFIPN 152
G +AVK K + + + E+ IL + H N+VK G C E L+ EF+P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 153 GTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
G+L +YL P + + + +L+ A ++ + + YL S Y+ HRD+ + N+L++ +++
Sbjct: 110 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQ 164
Query: 213 AKIADFGTSRSIAIDQTHVSTK---VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
KI DFG +++I D+ + K F Y PE S+F SDV+SFGV L ELL
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 223
Query: 270 T 270
T
Sbjct: 224 T 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 146 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 29/239 (12%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKS-KVVDESKL----E 113
RI EL K ++LG G GTVYKG+ + DG + + + KV+ E+ +
Sbjct: 12 RILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK 64
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS----LT 169
E ++E +++ + V +LLG CL V LV + +P G L ++ + L L
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQT 229
W M ++A+ ++YL + + HRD+ + N+L+ KI DFG +R + ID+T
Sbjct: 124 WCM------QIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 230 -HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+ + + ++ E +FT +SDV+S+GV + EL+T G KP I A E +L
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 39/298 (13%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
+F E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA 225
EM +++A E+A+ +AYL++ ++ HRD+ + N ++ + KI DFG +R I
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI- 180
Query: 226 IDQTHVSTKVQGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+ + +G ++ PE + FT SD++SFGVVL E+ + ++P + +NE
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE 239
Query: 283 GRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
++ + + D D+ + V+D+ + C + RPT E+
Sbjct: 240 ------QVLKFVMDGGYLDQPDNCPER---------VTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L D R +AVK + D S F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTF 239
+AL + H + I HRD+K NI++ K+ DFG +R+IA V+ V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPVSVAYQHVRE--- 234
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 96 GRIIAVKKSKVVDE-SKLEEFINEVVILSQINHRNVVKLLGCCLEV--EVPLLVYEFIPN 152
G +AVK K + + + E+ IL + H N+VK G C E L+ EF+P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 153 GTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
G+L +YL P + + + +L+ A ++ + + YL S Y+ HRD+ + N+L++ +++
Sbjct: 98 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQ 152
Query: 213 AKIADFGTSRSIAIDQTHVSTK--VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
KI DFG +++I D+ + K + PE S+F SDV+SFGV L ELLT
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 148 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 148 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 136
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 137 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 37 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 152
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 153 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 256
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 257 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 309
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L D R +AVK + D S F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTF 239
+AL + H + I HRD+K NI++ K+ DFG +R+IA V+ V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPDSVAYQHVRE--- 234
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 142
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 33/279 (11%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVIL 122
LD + + +I G+G G V+KG+ D R V K++D E ++E+ E+ +L
Sbjct: 3 LDPEELFTKLEKI-GKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVA 181
SQ + V K G L+ ++ E++ G+ L P +E + +R E+
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ L YLHS + HRDIK+ N+LL E K+ADFG + + Q +T V GT +
Sbjct: 115 KGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFW 170
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
+ PE + S + K+D++S G+ +EL G+ P S E LF
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS---------------ELHPMKVLF- 214
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+I + E + + + CLN RPT KE+
Sbjct: 215 LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 142
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 490 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + + G + + PE
Sbjct: 491 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 80 LGQGGQGTVYKGML--ADGRIIAVK----KSKVVDESK-LEEFINEVVILSQINHRNVVK 132
LG G G V +G G+ ++V K V+ + + +++FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
L G L + + V E P G+L L L R A +VAE + YL S +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 136
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + N+LL + KI DFG R++ + H + + F + PE ++
Sbjct: 137 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKP 274
F+ SD + FGV L E+ T GQ+P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 78 RILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLEEFINEVVILSQINHRNV 130
R LGQG G VY+G D G K V+ES + EF+NE ++ +V
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEELSLTWEMRLRIATEVAE 182
V+LLG + + L+V E + +G L YL ++P EM +++A E+A+
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIAD 140
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGTFGY 241
+AYL++ ++ HRD+ + N ++ + KI DFG +R I D K +
Sbjct: 141 GMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLF 300
+ PE + FT SD++SFGVVL E+ + ++P + +NE ++ + +
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE------QVLKFVMDGGYL 250
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
D D+ + V+D+ + C + RPT E+
Sbjct: 251 DQPDNCPER---------VTDLMRMCWQFNPKMRPTFLEI 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVIL 122
+D + ++RI G+G G VYKG+ D V K++D E ++E+ E+ +L
Sbjct: 15 VDPEELFTKLDRI-GKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVL 71
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVA 181
SQ + + + G L+ ++ E++ G+ L P EE + +R E+
Sbjct: 72 SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-----EIL 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ L YLHS + HRDIK+ N+LL E+ K+ADFG + + Q + V GT +
Sbjct: 127 KGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFW 182
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
+ PE + S + K+D++S G+ +EL G+ P S + LF
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM---------------RVLF- 226
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+I + E + + + CLN R RPT KE+
Sbjct: 227 LIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVILSQINHRNVVKLLG 135
+G+G G V+KG+ D R V K++D E ++E+ E+ +LSQ + V K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
L+ ++ E++ G+ L P +E + +R E+ + L YLHS +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHSEKKI- 146
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HRDIK+ N+LL E K+ADFG + + Q +T V GT ++ PE + S +
Sbjct: 147 --HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAE 314
K+D++S G+ +EL G+ P S E LF +I + E
Sbjct: 204 KADIWSLGITAIELARGEPPHS---------------ELHPMKVLF-LIPKNNPPTLEGN 247
Query: 315 EIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ + + CLN RPT KE+
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 113/214 (52%), Gaps = 15/214 (7%)
Query: 77 NRILGQGGQGTVYKG-----MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
++ LG G GTV KG + + + K++ D + +E + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+++G C E E +LV E G L +YL + + + + + +V+ + YL S
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRS 249
++ HRD+ + N+LL ++ AKI+DFG S+++ D+ + G + + PE
Sbjct: 132 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 250 SQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+F+ KSDV+SFGV++ E + GQKP + +E
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG +R + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 96 GRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVP--LLVYEFIPN 152
G ++AVK K + E+ IL + H +++K GCC + LV E++P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 153 GTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
G+L YL P + L L A ++ E +AYLH+ Y+ HRD+ + N+LLD
Sbjct: 120 GSLRDYL--PRHSIGLA--QLLLFAQQICEGMAYLHAQHYI---HRDLAARNVLLDNDRL 172
Query: 213 AKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
KI DFG ++++ + G F Y PE + +F SDV+SFGV L ELL
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELL 231
Query: 270 T 270
T
Sbjct: 232 T 232
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 21/222 (9%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E + NG+L +L HD + + L +R
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 125
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 126 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 34/219 (15%)
Query: 79 ILGQGGQGTVYKGMLA-DGRIIAVKKSKVVDESKLEEFINEVVILSQINH---------- 127
+LGQG G V K A D R A+KK + +E KL ++EV++L+ +NH
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 128 ---RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
RN VK + + + E+ NGTL+ +H E L+ + R+ ++ EAL
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-------AIDQTHVS----- 232
+Y+HS I HRD+K NI +DE KI DFG ++++ +D ++
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 233 -TKVQGTFGYLDPEYFR-SSQFTDKSDVYSFGVVLVELL 269
T GT Y+ E + + +K D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLAD----GRIIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 117
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PYEEL 166
++E+ IL I H NVV LLG C + PL+V EF G L YL PY+E
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 167 S-------LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 195
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D +V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 278 IWANE 282
+ +E
Sbjct: 256 VKIDE 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL ++ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGFV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLAD----GRIIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYA 117
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + ++K +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ +I H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 142/299 (47%), Gaps = 37/299 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E++ NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG R + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANS 351
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 9/197 (4%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V G +AVK K S+ +EF E + +++H +VK G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 140 VEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
E P+ +V E+I NG L YL + L + L + +V E +A+L S ++ HR
Sbjct: 75 -EYPIYIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFLESHQFI---HR 128
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
D+ + N L+D K++DFG +R + DQ S + + PE F +++ KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 259 YSFGVVLVELLT-GQKP 274
++FG+++ E+ + G+ P
Sbjct: 189 WAFGILMWEVFSLGKMP 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 122
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 123 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 37/298 (12%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E + NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
G + PE +FT SDV+S+G+VL E+++ G++P W ++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQD------- 258
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRAN 350
+ +D+ R + A+ + C NRP +++ L+++ N
Sbjct: 259 ------VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLAD----GRIIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 117
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 26/244 (10%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D N+ + LG+G G V + A R +AVK K S+
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 164 EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGT 220
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGL 194
Query: 221 SRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSI 278
+R I D V + ++ PE +T +SDV+SFGV+L E+ + G P +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 279 WANE 282
+E
Sbjct: 255 KIDE 258
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 148/331 (44%), Gaps = 55/331 (16%)
Query: 55 SIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGML--ADGR----IIAVKKSKV-V 107
S+D +I + + + + LG+G G V K GR +AVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH------- 160
S+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 161 --------------DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNIL 206
D +E +LT + A ++++ + YL A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 207 LDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSSQFTDKSDVYSFGVV 264
+ E + KI+DFG SR + + ++V + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 265 LVELLT-GQKPISSIWANEGRNL--TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSD 321
L E++T G P I NL T + +E +NC S E +M
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLKTGHRMER-PDNC-----------SEEMYRLML--- 286
Query: 322 VAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
+C RP +++ +LE++ R
Sbjct: 287 ---QCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K + S E F+ E ++ ++ H +V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 306
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG R I ++ + + PE +FT KSDV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 410
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 411 LHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 120
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 121 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 129
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 233
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 234 LHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 145
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 146 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 52 IGGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGML-----ADGRIIAVKKSKV 106
+G +F+ + L K D LG+G G V G ++AVK K
Sbjct: 1 MGSPASDPTVFHKRYLKKIRD-------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 53
Query: 107 -VDESKLEEFINEVVILSQINHRNVVKLLGCCLEV-EVPL-LVYEFIPNGTLFQYLHDPY 163
+ E+ IL + H +++K GCC + E L LV E++P G+L YL P
Sbjct: 54 DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PR 111
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
+ L L A ++ E +AYLHS Y+ HR++ + N+LLD KI DFG +++
Sbjct: 112 HSIGLA--QLLLFAQQICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 224 IAIDQTHVSTKVQG---TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
+ + + G F Y PE + +F SDV+SFGV L ELLT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 119
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 120 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 9/211 (4%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINH 127
+ + F++ LG+G G+VYK + + G+I+A+K+ V ES L+E I E+ I+ Q +
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDS 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+VVK G + +V E+ G++ + +LT + I + L YL
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEYL 141
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
H ++ HRDIK+ NILL+ + AK+ADFG + + D V GT ++ PE
Sbjct: 142 H---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVI 197
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISSI 278
+ + +D++S G+ +E+ G+ P + I
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFIN 117
++++ + + + R +G+G G V++G+ +A+K K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E + + Q +H ++VKL+G E V ++ E G L +L + SL + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 117
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+++ ALAYL S ++ HRDI + N+L+ K+ DFG SR + + ++K +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
++ PE +FT SDV+ FGV + E+L G KP + N+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 76 MNRILGQGGQGTVYKGMLAD----GRIIAVKKSK-VVDESKLEEFINEVVILSQINHRNV 130
+ R +G+G G V++G+ +A+K K +S E+F+ E + + Q +H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL+G E V ++ E G L +L + SL + A +++ ALAYL S
Sbjct: 454 VKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS 250
++ HRDI + N+L+ K+ DFG SR + + ++K + ++ PE
Sbjct: 511 RFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+FT SDV+ FGV + E+L G KP + N+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 305
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 409
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVV 131
+ M LG GG G V + + D G +A+K+ + + E + E+ I+ ++NH NVV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 132 KL------LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR-IATEVAEAL 184
L ++PLL E+ G L +YL+ +E E +R + ++++ AL
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDISSAL 134
Query: 185 AYLHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
YLH + I HRD+K NI+L ++ KI D G ++ + DQ + T+ GT Y
Sbjct: 135 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 189
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIW 279
L PE ++T D +SFG + E +TG +P W
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 76 MNRILGQGGQGTVYKGMLADGR----IIAVKKSK-VVDESKLEEFINEVVILSQINHRNV 130
+ R +G+G G V++G+ +A+K K +S E+F+ E + + Q +H ++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL+G E V ++ E G L +L + SL + A +++ ALAYL S
Sbjct: 71 VKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS 250
++ HRDI + N+L+ K+ DFG SR + + ++K + ++ PE
Sbjct: 128 RFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+FT SDV+ FGV + E+L G KP + N+
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 305
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 409
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVV 131
+ M LG GG G V + + D G +A+K+ + + E + E+ I+ ++NH NVV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 132 KL------LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR-IATEVAEAL 184
L ++PLL E+ G L +YL+ +E E +R + ++++ AL
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRTLLSDISSAL 135
Query: 185 AYLHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
YLH + I HRD+K NI+L ++ KI D G ++ + DQ + T+ GT Y
Sbjct: 136 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 190
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIW 279
L PE ++T D +SFG + E +TG +P W
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 76 MNRILGQGGQGTVYKGMLAD----GRIIAVKKSK-VVDESKLEEFINEVVILSQINHRNV 130
+ R +G+G G V++G+ +A+K K +S E+F+ E + + Q +H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL+G E V ++ E G L +L + SL + A +++ ALAYL S
Sbjct: 454 VKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 191 AYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS 250
++ HRDI + N+L+ K+ DFG SR + + ++K + ++ PE
Sbjct: 511 RFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 251 QFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+FT SDV+ FGV + E+L G KP + N+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--E 164
++E+ IL I H NVV LLG C + PL+V EF G L YL PY E
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 165 ELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS 221
+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLA 195
Query: 222 RSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIW 279
R I D V + ++ PE +T +SDV+SFGV+L E+ + G P +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 280 ANE 282
+E
Sbjct: 256 IDE 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 132
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 236
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 237 LHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 128
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 232
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 233 LHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 13/210 (6%)
Query: 80 LGQGGQGTVYKG---MLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLG 135
LG G G+V +G M +A+K K +++ EE + E I+ Q+++ +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
C + E +LV E G L ++L EE+ ++ L +V+ + YL ++
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQVSMGMKYLEEKNFV-- 458
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDPEYFRSSQFT 253
HR++ + N+LL ++ AKI+DFG S+++ D ++ + + G + + PE +F+
Sbjct: 459 -HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 254 DKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+SDV+S+GV + E L+ GQKP + E
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 130
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 234
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 235 LHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 305
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 409
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 388
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 492
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 493 LHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 52 IGGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGML-----ADGRIIAVKKSKV 106
+G +F+ + L K D LG+G G V G ++AVK K
Sbjct: 1 MGSPASDPTVFHKRYLKKIRD-------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 53
Query: 107 -VDESKLEEFINEVVILSQINHRNVVKLLGCCLEV-EVPL-LVYEFIPNGTLFQYLHDPY 163
+ E+ IL + H +++K GCC + E L LV E++P G+L YL P
Sbjct: 54 DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PR 111
Query: 164 EELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS 223
+ L L A ++ E +AYLH+ Y+ HR++ + N+LLD KI DFG +++
Sbjct: 112 HSIGLA--QLLLFAQQICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 224 IAIDQTHVSTKVQG---TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
+ + + G F Y PE + +F SDV+SFGV L ELLT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVILSQINHRNVVKLLG 135
+G+G G V+KG+ D R V K++D E ++E+ E+ +LSQ + V K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
L+ ++ E++ G+ L P +E + +R E+ + L YLHS +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EILKGLDYLHSEKKI- 141
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
HRDIK+ N+LL E K+ADFG + + Q + V GT ++ PE + S +
Sbjct: 142 --HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 198
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAE 314
K+D++S G+ +EL G+ P S E LF +I + E
Sbjct: 199 KADIWSLGITAIELARGEPPHS---------------ELHPMKVLF-LIPKNNPPTLEGN 242
Query: 315 EIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ + + CLN RPT KE+
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 33/279 (11%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD----ESKLEEFINEVVIL 122
LD + + +I G+G G V+KG+ D R V K++D E ++E+ E+ +L
Sbjct: 3 LDPEELFTKLEKI-GKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-PYEELSLTWEMRLRIATEVA 181
SQ + V K G L+ ++ E++ G+ L P +E + +R E+
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ L YLHS + HRDIK+ N+LL E K+ADFG + + Q + V GT +
Sbjct: 115 KGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFW 170
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
+ PE + S + K+D++S G+ +EL G+ P S E LF
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS---------------ELHPMKVLF- 214
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+I + E + + + CLN RPT KE+
Sbjct: 215 LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V GR +AVK + + + E NEVVI+ H NVV++ L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
E ++ EF+ G L D ++ L E + V +ALAYLH+ + HR
Sbjct: 113 VGEELWVLMEFLQGGA----LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG I+ D V GT ++ PE S + + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDI 224
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 225 WSLGIMVIEMVDGEPP 240
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 75 NMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
++ +I+G G G V G L G+ +A+K K E + +F++E I+ Q +H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HD-PYEELSLTWEMRLRIATEVAEALAY 186
+++L G + ++V E++ NG+L +L HD + + L +R V + Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRY 166
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDP 244
L Y+ HRD+ + N+L+D K++DFG SR + D T G + P
Sbjct: 167 LSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
E F+ SDV+SFGVV+ E+L G++P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 55/331 (16%)
Query: 55 SIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGML--ADGR----IIAVKKSKV-V 107
S+D +I + + + + LG+G G V K GR +AVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH------- 160
S+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 161 --------------DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNIL 206
D +E +LT + A ++++ + YL A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL 182
Query: 207 LDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSSQFTDKSDVYSFGVV 264
+ E + KI+DFG SR + + + V + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 265 LVELLT-GQKPISSIWANEGRNL--TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSD 321
L E++T G P I NL T + +E +NC S E +M
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLKTGHRMER-PDNC-----------SEEMYRLML--- 286
Query: 322 VAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
+C RP +++ +LE++ R
Sbjct: 287 ---QCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 256
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 257 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 305 ILTLTTNEE 313
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 137/297 (46%), Gaps = 37/297 (12%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
++ E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
EM +++A E+A+ +AYL++ ++ HR++ + N ++ + KI DFG +R I
Sbjct: 127 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG 283
D K ++ PE + FT SD++SFGVVL E+ + ++P + +NE
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNE- 240
Query: 284 RNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
++ + + D D+ + V+D+ + C RPT E+
Sbjct: 241 -----QVLKFVMDGGYLDQPDNCPER---------VTDLMRMCWQFNPNMRPTFLEI 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 55/331 (16%)
Query: 55 SIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGML--ADGR----IIAVKKSKV-V 107
S+D +I + + + + LG+G G V K GR +AVK K
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH------- 160
S+L + ++E +L Q+NH +V+KL G C + LL+ E+ G+L +L
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 161 --------------DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNIL 206
D +E +LT + A ++++ + YL A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 207 LDEKYRAKIADFGTSRSIAIDQTHVSTKVQG--TFGYLDPEYFRSSQFTDKSDVYSFGVV 264
+ E + KI+DFG SR + + + V + QG ++ E +T +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 265 LVELLT-GQKPISSIWANEGRNL--TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSD 321
L E++T G P I NL T + +E +NC S E +M
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLLKTGHRMER-PDNC-----------SEEMYRLML--- 286
Query: 322 VAKRCLNSYGRNRPTMKEVAMELERIRANSR 352
+C RP +++ +LE++ R
Sbjct: 287 ---QCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDES----KLE 113
++ E + + + + R LGQG G VY+G D G K V+ES +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--------HDPYEE 165
EF+NE ++ +VV+LLG + + L+V E + +G L YL ++P
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 166 LSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI- 224
EM +++A E+A+ +AYL++ ++ HR++ + N ++ + KI DFG +R I
Sbjct: 126 PPTLQEM-IQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
D K ++ PE + FT SD++SFGVVL E+ +
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L R +AVK + D S F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 71 HPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTF 239
+AL + H + I HRD+K NI++ K+ DFG +R+IA V+ V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPVSVAYQHVRE--- 234
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 259
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 260 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 308 ILTLTTNEE 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E +IADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLVY-EFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D +V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 278 IWANE 282
+ +E
Sbjct: 245 VKIDE 249
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + +A ++A +AY+ Y+ HRD
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYV---HRD 139
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+ + NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 243
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 244 LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 75 NMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
++ +I+G G G V G L G+ +A+K K E + +F++E I+ Q +H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HD-PYEELSLTWEMRLRIATEVAEALAY 186
+++L G + ++V E++ NG+L +L HD + + L +R V + Y
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRY 166
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG--YLDP 244
L Y+ HRD+ + N+L+D K++DFG SR + D T G + P
Sbjct: 167 LSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
E F+ SDV+SFGVV+ E+L G++P
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 254
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 255 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
Query: 347 I 347
I
Sbjct: 303 I 303
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G + +AVK K S ++ F+ E ++ + H +V+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
E ++ EF+ G+L +L E + + + ++AE +AY+ Y+ HRD
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKNYI---HRD 134
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ N+L+ E KIADFG +R I ++ + + PE FT KS+V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 195 SFGILLYEIVTYGKIP 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L R +AVK + D S F E + +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 88 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 143
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTF 239
+AL + H + I HRD+K NI++ K+ DFG +R+IA V+ V GT
Sbjct: 144 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPVSVAYQHVRE--- 251
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 252 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 296
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LG G G V+ G + +AVK K S ++ F+ E ++ + H +V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
E ++ E++ G+L +L E + + + ++AE +AY+ Y+ HRD
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKNYI---HRD 135
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ N+L+ E KIADFG +R I ++ + + PE FT KSDV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 260 SFGVVLVELLT-GQKP 274
SFG++L E++T G+ P
Sbjct: 196 SFGILLYEIVTYGKIP 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 230
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D +V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 278 IWANE 282
+ +E
Sbjct: 291 VKIDE 295
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + ++ ++A +AY+ Y+ HRD
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYV---HRD 136
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 240
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 73 YFNMNRILGQGGQGTVYKGML-----ADGRIIAVKKSKVVDESKLEE-FINEVVILSQIN 126
Y R LG+G G V G ++AVK K +L + E+ IL +
Sbjct: 9 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 127 HRNVVKLLGCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H ++VK GCC + + LV E++P G+L YL P + L L A ++ E +
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLA--QLLLFAQQICEGM 124
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGY 241
AYLH+ Y+ HR + + N+LLD KI DFG ++++ + + G F Y
Sbjct: 125 AYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
PE + +F SDV+SFGV L ELLT
Sbjct: 182 A-PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 73 YFNMNRILGQGGQGTVYKGML-----ADGRIIAVKKSKVVDESKLEE-FINEVVILSQIN 126
Y R LG+G G V G ++AVK K +L + E+ IL +
Sbjct: 10 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 127 HRNVVKLLGCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H ++VK GCC + + LV E++P G+L YL P + L L A ++ E +
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLA--QLLLFAQQICEGM 125
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGY 241
AYLH+ Y+ HR + + N+LLD KI DFG ++++ + + G F Y
Sbjct: 126 AYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLT 270
PE + +F SDV+SFGV L ELLT
Sbjct: 183 A-PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ E+ G L +YL P E S +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 313
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 314 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 362 ILTLTTNEE 370
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLVY-EFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D +V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 278 IWANE 282
+ +E
Sbjct: 245 VKIDE 249
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQIN 126
+D + + ILG GG V+ L R +AVK + D S F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 127 HRNVVKLLGCCLEVE-----VPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H +V + E E +P +V E++ TL +H E +T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTF 239
+AL + H + I HRD+K NI++ K+ DFG +R+IA V+ V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
YL PE R +SDVYS G VL E+LTG+ P + G + + + + E
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT------GDSPVSVAYQHVRE--- 234
Query: 300 FDIIDDQVRKSGEAEEIMAV--SDVAKRCLNSYGRNRPTMKEVAMELERI 347
D I R G + ++ AV +AK N Y T E+ +L R+
Sbjct: 235 -DPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 79 ILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVV 131
++G+G G V K G+ D I +K+ D+ + +F E+ +L ++ +H N++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNII 89
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLH-------DPYEEL------SLTWEMRLRIAT 178
LLG C L E+ P+G L +L DP + +L+ + L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS--IAIDQTHVSTKVQ 236
+VA + YL ++ HRD+ + NIL+ E Y AKIADFG SR + + +T V+
Sbjct: 150 DVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 206
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIE 295
++ E S +T SDV+S+GV+L E+++ G P + C E
Sbjct: 207 ----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-------------TCAE 249
Query: 296 ENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
L++ + R V D+ ++C RP+ ++ + L R+
Sbjct: 250 ---LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLE 139
LGQG G V+ G +A+K K S E F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 140 VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRD 199
+ +V E++ G+L +L + L + ++ ++A +AY+ Y+ HRD
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYV---HRD 136
Query: 200 IKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVY 259
+++ NIL+ E K+ADFG +R I ++ + + PE +FT KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 260 SFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMA 318
SFG++L EL T G+ P + E + D ++ R E +
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNRE----------------VLDQVERGYRMPCPPECPES 240
Query: 319 VSDVAKRCLNSYGRNRPTMKEVAMELE 345
+ D+ +C RPT + + LE
Sbjct: 241 LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D +V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 278 IWANE 282
+ +E
Sbjct: 254 VKIDE 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 278 IWANE 282
+ +E
Sbjct: 245 VKIDE 249
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 79 ILGQGGQGTVYKGMLA-DGRIIAVKKSKVVDESKLEEFINEVVILSQINH---------- 127
+LGQG G V K A D R A+KK + +E KL ++EV++L+ +NH
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 128 ---RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
RN VK + + + E+ N TL+ +H E L+ + R+ ++ EAL
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-------AIDQTHVS----- 232
+Y+HS I HRD+K NI +DE KI DFG ++++ +D ++
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 233 -TKVQGTFGYLDPEYFR-SSQFTDKSDVYSFGVVLVELL 269
T GT Y+ E + + +K D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 278 IWANE 282
+ +E
Sbjct: 254 VKIDE 258
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLVY-EFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 278 IWANE 282
+ +E
Sbjct: 245 VKIDE 249
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 21/237 (8%)
Query: 54 GSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVD 108
G++ RI E K ++LG G GTVYKG+ + +G +A+K+ +
Sbjct: 1 GAMALLRILKETEFKKI-------KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 53
Query: 109 ESKL-EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS 167
K +E ++E +++ +++ +V +LLG CL V L+ + +P G L Y+ + + +
Sbjct: 54 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 112
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID 227
+ L ++AE + YL + HRD+ + N+L+ KI DFG ++ + +
Sbjct: 113 SQY--LLNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 167
Query: 228 QTHVSTK-VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+ + + ++ E +T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 46/310 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVY----------EFI----PNGTLFQYLHDPYEELS 167
I H+N++ LLG C + + PL V E++ P G + Y + E
Sbjct: 95 KMIGKHKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AI 226
+T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 227 DQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRN 285
D +T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 286 LTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELE 345
LF ++ + R A + + + C ++ RPT K++ +L+
Sbjct: 268 -------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 346 RIRANSRDDE 355
RI + ++E
Sbjct: 315 RILTLTTNEE 324
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 79 ILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVV 131
++G+G G V K G+ D I +K+ D+ + +F E+ +L ++ +H N++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNII 79
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLH-------DPYEEL------SLTWEMRLRIAT 178
LLG C L E+ P+G L +L DP + +L+ + L A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR--SIAIDQTHVSTKVQ 236
+VA + YL ++ HRD+ + NIL+ E Y AKIADFG SR + + +T V+
Sbjct: 140 DVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 196
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIE 295
++ E S +T SDV+S+GV+L E+++ G P + C E
Sbjct: 197 ----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-------------TCAE 239
Query: 296 ENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
L++ + R V D+ ++C RP+ ++ + L R+
Sbjct: 240 ---LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 44/309 (14%)
Query: 72 DYFNMNRILGQGGQGTVY--------KGMLADGRIIAVKKSKV-VDESKLEEFINEVVIL 122
D + + LG+G G V K + +AVK K E L + ++E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 123 SQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH---DPYEELS----------L 168
I H+N++ LLG C + ++ + G L +YL P E S +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AID 227
T++ + ++A + YL S + HRD+ + N+L+ E KIADFG +R I ID
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 228 QTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNL 286
+T + ++ PE +T +SDV+SFGV++ E+ T G P I E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---- 267
Query: 287 TTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELER 346
LF ++ + R A + + + C ++ RPT K++ +L+R
Sbjct: 268 ------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 347 IRANSRDDE 355
I + ++E
Sbjct: 316 ILTLTTNEE 324
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 117/222 (52%), Gaps = 21/222 (9%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML---ADGRI-IAVKKSKV-VDESKLEEFINE 118
+KELD AT+ ++++++G G G V G L + I +A+K KV E + +F+ E
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP-YEELSLTWEMRLR 175
I+ Q +H N+++L G + + ++V E + NG+L +L HD + + L +R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
+A + YL + HRD+ + NIL++ K++DFG SR + D T
Sbjct: 155 ---GIASGMKYLSDMGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYLHD------PY--- 163
++E+ IL I H NVV LLG C + PL+V EF G L YL PY
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 164 -EELS---LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
E+L LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 220 TSRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
+R I D V + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 278 IWANE 282
+ +E
Sbjct: 254 VKIDE 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 73 YFNMNRILGQGGQGTVY---------KGMLADGRIIAVKKSKVVDESKLEEFINEVVILS 123
+F + ++LGQG G V+ G L +++ KV D + + E IL+
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTK---MERDILA 85
Query: 124 QINHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAE 182
+NH VVKL + E L L+ +F+ G LF L +E+ T E E+A
Sbjct: 86 DVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELAL 141
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
L +LHS L I +RD+K NILLDE+ K+ DFG S+ AID + GT Y+
Sbjct: 142 GLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTVEYM 197
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE + +D +S+GV++ E+LTG P
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 49/328 (14%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL------ 159
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPP 147
Query: 160 ---------HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEK 210
H+P E+LS L +++VA+ +A+L S + HRD+ + N+LL
Sbjct: 148 GLEYSYNPSHNPEEQLSS--RDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNG 202
Query: 211 YRAKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
+ AKI DFG +R I D + V + ++ PE +T +SDV+S+G++L E+
Sbjct: 203 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
Query: 270 T-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLN 328
+ G P I N + ++ D + + A + + + C
Sbjct: 263 SLGLNPYPGILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWA 307
Query: 329 SYGRNRPTMKEVAMELERIRANSRDDEN 356
+RPT +++ L+ R + +
Sbjct: 308 LEPTHRPTFQQICSFLQEQAQEDRRERD 335
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 74 FNMNRILGQGGQGTVY---KGMLADGRII----AVKKS--KVVDESKLEEFINEVVILSQ 124
F + ++LGQG G V+ K +D R + +KK+ KV D + + E IL +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDILVE 82
Query: 125 INHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
+NH +VKL + E L L+ +F+ G LF L +E+ T E E+A A
Sbjct: 83 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 138
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
L +LHS L I +RD+K NILLDE+ K+ DFG S+ +ID + GT Y+
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 194
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
PE T +D +SFGV++ E+LTG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 74 FNMNRILGQGGQGTVY---KGMLADGRII----AVKKS--KVVDESKLEEFINEVVILSQ 124
F + ++LGQG G V+ K +D R + +KK+ KV D + + E IL +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDILVE 83
Query: 125 INHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
+NH +VKL + E L L+ +F+ G LF L +E+ T E E+A A
Sbjct: 84 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 139
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
L +LHS L I +RD+K NILLDE+ K+ DFG S+ +ID + GT Y+
Sbjct: 140 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 195
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
PE T +D +SFGV++ E+LTG P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
Query: 74 FNMNRILGQGGQGTVY---KGMLADGRII----AVKKS--KVVDESKLEEFINEVVILSQ 124
F + ++LGQG G V+ K +D R + +KK+ KV D + + E IL +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDILVE 82
Query: 125 INHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
+NH +VKL + E L L+ +F+ G LF L +E+ T E E+A A
Sbjct: 83 VNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALA 138
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
L +LHS L I +RD+K NILLDE+ K+ DFG S+ +ID + GT Y+
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 194
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
PE T +D +SFGV++ E+LTG P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
+ + LG G G V+ +AVK K S +E F+ E ++ + H +VKL
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL 75
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLH------DPYEELSLTWEMRLRIATEVAEALAYL 187
+ + ++ EF+ G+L +L P +L + + ++AE +A++
Sbjct: 76 HAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-------IDFSAQIAEGMAFI 127
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
Y+ HRD+++ NIL+ KIADFG +R I ++ + + PE
Sbjct: 128 EQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 184
Query: 248 RSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG-RNLTTYFVECIEENCLFDIIDD 305
FT KSDV+SFG++L+E++T G+ P + E R L + ENC
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------- 237
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMK 338
EE+ ++ RC + RPT +
Sbjct: 238 -------PEELY---NIMMRCWKNRPEERPTFE 260
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S++NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 223
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 79 ILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVV 131
++G+G G V K G+ D I +K+ D+ + +F E+ +L ++ +H N++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNII 86
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLH-------DPYEEL------SLTWEMRLRIAT 178
LLG C L E+ P+G L +L DP + +L+ + L A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRS--IAIDQTHVSTKVQ 236
+VA + YL ++ HR++ + NIL+ E Y AKIADFG SR + + +T V+
Sbjct: 147 DVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 203
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIE 295
++ E S +T SDV+S+GV+L E+++ G P + C E
Sbjct: 204 ----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-------------TCAE 246
Query: 296 ENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
L++ + R V D+ ++C RP+ ++ + L R+
Sbjct: 247 ---LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 33/291 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS--QYLLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDD 305
+T +SDV+S+GV + EL+T G KP I A+E + I++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEK 234
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDEN 356
R + V + ++C +RP +E+ +E ++ +RD +
Sbjct: 235 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM---ARDPQR 282
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 138/290 (47%), Gaps = 33/290 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 135
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDD 305
+T +SDV+S+GV + EL+T G KP I A+E + I++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEK 236
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 355
R + V + ++C +RP +E+ +E ++ +RD +
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM---ARDPQ 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 135
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 79 ILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+LG+G G K + G ++ +K+ DE F+ EV ++ + H NV+K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ + + E+I GTL + + W R+ A ++A +AYLHS + I H
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVST-------------KVQGTFGYLDP 244
RD+ S N L+ E +ADFG +R + ++T V G ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELL 269
E + +K DV+SFG+VL E++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 135
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 37/273 (13%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
+ + LG G G V+ +AVK K S +E F+ E ++ + H +VKL
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL 248
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLH------DPYEELSLTWEMRLRIATEVAEALAYL 187
+ + ++ EF+ G+L +L P +L + + ++AE +A++
Sbjct: 249 HAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-------IDFSAQIAEGMAFI 300
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
Y+ HRD+++ NIL+ KIADFG +R I ++ + + PE
Sbjct: 301 EQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 357
Query: 248 RSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG-RNLTTYFVECIEENCLFDIIDD 305
FT KSDV+SFG++L+E++T G+ P + E R L + ENC
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------- 410
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMK 338
EE+ ++ RC + RPT +
Sbjct: 411 -------PEELY---NIMMRCWKNRPEERPTFE 433
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL C + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 154
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S++NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 157 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 209
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 137
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 138 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 134
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 135 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 134
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 135 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 137
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 138 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 140
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 140
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 148 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 200
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 240
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 33/290 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 135
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDD 305
+T +SDV+S+GV + EL+T G KP I A+E + I++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEK 236
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 355
R + V + ++C +RP +E+ +E ++ +RD +
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM---ARDPQ 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 92 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 203
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 204 WSLGIMVIEMVDGEPP 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 156 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 208
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 33/290 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDD 305
+T +SDV+S+GV + EL+T G KP I A+E + I++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEK 237
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 355
R + V + ++C +RP +E+ +E ++ +RD +
Sbjct: 238 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM---ARDPQ 284
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 223
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 135
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 136 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 158
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 159 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 33/290 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 143
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 144 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDD 305
+T +SDV+S+GV + EL+T G KP I A+E + I++
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------------ISSILEK 244
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 355
R + V + ++C +RP +E+ +E ++ +RD +
Sbjct: 245 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM---ARDPQ 291
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 88 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 199
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 200 WSLGIMVIEMVDGEPP 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 139
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 140 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 156 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 208
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 142 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 253
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 254 WSLGIMVIEMVDGEPP 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 127
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 128 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 137 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 163 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 215
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 255
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 97 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 208
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 209 WSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 99 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 210
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 211 WSLGIMVIEMVDGEPP 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 157 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 209
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 173 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 225
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 265
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 138/309 (44%), Gaps = 39/309 (12%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH----- 160
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 82 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 139
Query: 161 DPYEELSLTWEMR--LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADF 218
D +E E+R L +++VA+ +A+L S + HRD+ + N+LL + AKI DF
Sbjct: 140 DLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDF 196
Query: 219 GTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPIS 276
G +R I D + V + ++ PE +T +SDV+S+G++L E+ + G P
Sbjct: 197 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 256
Query: 277 SIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPT 336
I N + ++ D + + A + + + C +RPT
Sbjct: 257 GILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 301
Query: 337 MKEVAMELE 345
+++ L+
Sbjct: 302 FQQICSFLQ 310
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 171 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 223
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F++ R LG+G G VY + I+A+K KS++ E + E+ I S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALA 185
N++++ + + L+ EF P G L++ L H ++E + E+A+AL
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSATFMEELADALH 129
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVST----KVQGTFGY 241
Y H + HRDIK N+L+ K KIADFG S H + + GT Y
Sbjct: 130 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDY 179
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
L PE +K D++ GV+ E L G P S
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH----- 160
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 147
Query: 161 DPYEELSLTWEMR--LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADF 218
D +E E+R L +++VA+ +A+L S + HRD+ + N+LL + AKI DF
Sbjct: 148 DLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDF 204
Query: 219 GTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPIS 276
G +R I D + V + ++ PE +T +SDV+S+G++L E+ + G P
Sbjct: 205 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 264
Query: 277 SIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPT 336
I N + ++ D + + A + + + C +RPT
Sbjct: 265 GILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 309
Query: 337 MKEVAMELERIRANSRDDEN 356
+++ L+ R + +
Sbjct: 310 FQQICSFLQEQAQEDRRERD 329
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F++ R LG+G G VY + I+A+K KS++ E + E+ I S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALA 185
N++++ + + L+ EF P G L++ L H ++E + E+A+AL
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSATFMEELADALH 128
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVST----KVQGTFGY 241
Y H + HRDIK N+L+ K KIADFG S H + + GT Y
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDY 178
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
L PE +K D++ GV+ E L G P S
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D Y + ++G G G V +G L A G+ +A+K K E + EF++E
Sbjct: 8 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 65
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q H N+++L G +++ EF+ NG L +L + T + +
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLR 123
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKV 235
+A + YL +Y+ HRD+ + NIL++ K++DFG SR + + D T+ S+ +
Sbjct: 124 GIASGMRYLAEMSYV---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS-L 179
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQV 307
SD+++ G ++ +L+ G P + NEG F + I+ +D +
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRA--GNEG----LIFAKIIKLE--YDFPEKFF 258
Query: 308 RKSGEAEEIMAVSDVAKRC----LNSYG--RNRPTMKEVAME 343
K+ + E + V D KR + YG + P + V E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 15/219 (6%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLA-DGR---IIAVKKSKV-VDESKLEEFINE 118
+KE++ + + R++G G G V G L G+ +A+K KV E + +F+ E
Sbjct: 16 AKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGE 73
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H N++ L G + + ++V E++ NG+L +L + ++ + +
Sbjct: 74 ASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI--QLVGMLR 131
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
++ + YL Y+ HRD+ + NIL++ K++DFG SR + D T G
Sbjct: 132 GISAGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 239 FG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTV-YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V + + G+++AVKK + + + E NEVVI+ H NVV++ L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V +AL+ LH+ + HR
Sbjct: 219 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + V GT ++ PE + + D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 330
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 331 WSLGIMVIEMVDGEPP 346
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +R I S +G
Sbjct: 183 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRASYYRKGGCAMLP 235
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 275
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I + +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINAML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + R LG+G G VY I+A+K KS++ E + E+ I + ++H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
N+++L + L+ E+ P G L++ L + + + I E+A+AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYC 139
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ-GTFGYLDPEY 246
H + HRDIK N+LL K KIADFG S + + K GT YL PE
Sbjct: 140 HGKK---VIHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPPEM 192
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
+K D++ GV+ ELL G P S NE
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 27/282 (9%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQV 307
SD+++ G ++ +L+ G P + NEG F + I+ +D +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEG----LIFAKIIKLE--YDFPEKFF 258
Query: 308 RKSGEAEEIMAVSDVAKRC----LNSYG--RNRPTMKEVAME 343
K+ + E + V D KR + YG + P + V E
Sbjct: 259 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKV 106
G + R F K +D +++ LG+G V + G+ +II KK
Sbjct: 10 GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA 69
Query: 107 VDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYE 164
D KLE E I ++ H N+V+L E LV++ + G LF+ + + Y
Sbjct: 70 RDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 126
Query: 165 ELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTS 221
E + ++ E++AY HS+ I HR++K N+LL K + K+ADFG +
Sbjct: 127 EADAS-----HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Query: 222 RSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
I ++ + GT GYL PE + ++ D+++ GV+L LL G P
Sbjct: 179 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAAGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 59 CRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK-----L 112
RIF EL K ++LG G GTV+KG+ + +G I + V E K
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 113 EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEM 172
+ + ++ + ++H ++V+LLG C + LV +++P G+L ++ +L ++
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQ--HRGALGPQL 116
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV- 231
L ++A+ + YL + HR++ + N+LL + ++ADFG + + D +
Sbjct: 117 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 173
Query: 232 STKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYF 290
++ + ++ E ++T +SDV+S+GV + EL+T G +P + + E
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------- 225
Query: 291 VECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ D+++ R + + V V +C RPT KE+A E R+
Sbjct: 226 --------VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-TFGYL 242
L + ++ HRDI + N LL AKI DFG +R I + ++
Sbjct: 174 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 266
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-TFGYL 242
L + ++ HRDI + N LL AKI DFG +R I + ++
Sbjct: 197 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 37/297 (12%)
Query: 59 CRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK-----L 112
RIF EL K ++LG G GTV+KG+ + +G I + V E K
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 113 EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEM 172
+ + ++ + ++H ++V+LLG C + LV +++P G+L ++ +L ++
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQ--HRGALGPQL 134
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV- 231
L ++A+ + YL + HR++ + N+LL + ++ADFG + + D +
Sbjct: 135 LLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLL 191
Query: 232 STKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYF 290
++ + ++ E ++T +SDV+S+GV + EL+T G +P + + E
Sbjct: 192 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------- 243
Query: 291 VECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ D+++ R + + V V +C RPT KE+A E R+
Sbjct: 244 --------VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D + + +++G G G V G L G+ +A+K K + + +F++E
Sbjct: 2 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 59
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H N++ L G + + +++ E++ NG+L +L + T + +
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLR 117
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
+ + YL +Y+ HRD+ + NIL++ K++DFG SR + D T G
Sbjct: 118 GIGSGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 239 FG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 19/222 (8%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D Y + ++G G G V +G L A G+ +A+K K E + EF++E
Sbjct: 10 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 67
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q H N+++L G +++ EF+ NG L +L + T + +
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLR 125
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKV 235
+A + YL +Y+ HRD+ + NIL++ K++DFG SR + + D T S+ +
Sbjct: 126 GIASGMRYLAEMSYV---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS-L 181
Query: 236 QGTFG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D + + +++G G G V G L G+ +A+K K + + +F++E
Sbjct: 8 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 65
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H N++ L G + + +++ E++ NG+L +L + T + +
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLR 123
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
+ + YL +Y+ HRD+ + NIL++ K++DFG SR + D T G
Sbjct: 124 GIGSGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 239 FG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 79 ILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+LG+G G VY G L++ IA+K+ D + E+ + + H+N+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
E + E +P G+L L + L + ++ E L YLH + I H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 145
Query: 198 RDIKSTNILLDEKYRA--KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ--FT 253
RDIK N+L++ Y KI+DFGTS+ +A T GT Y+ PE +
Sbjct: 146 RDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYG 203
Query: 254 DKSDVYSFGVVLVELLTGQKPI 275
+D++S G ++E+ TG+ P
Sbjct: 204 KAADIWSLGCTIIEMATGKPPF 225
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AVK ++ S L++ EV I+ +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G+ Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 247 FLILNPSKRGTLEQIM 262
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 74 FNMNRILGQGGQGTVYK-GMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F + R LG G G V+ +GR A +KK VV ++E +E ++LS + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
++++ G + + ++ ++I G LF L + + A EV AL YLHS
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I +RD+K NILLD+ KI DFG ++ + V+ + GT Y+ PE +
Sbjct: 125 KD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPEVVST 177
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ D +SFG+++ E+L G P
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVIL 122
K +D +++ LG+G V + G+ +II KK D KLE E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 59
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEV 180
++ H N+V+L E LV++ + G LF+ + + Y E + ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQI 114
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQG 237
E++AY HS+ I HR++K N+LL K + K+ADFG + I ++ + G
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 169
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
T GYL PE + ++ D+++ GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 7 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 60
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 117
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 118 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH + I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AVK ++ S L++ EV I+ +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G+ Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 247 FLILNPSKRGTLEQIM 262
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVIL 122
K +D +++ LG+G V + G+ +II KK D KLE E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 59
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEV 180
++ H N+V+L E LV++ + G LF+ + + Y E + ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQI 114
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQG 237
E++AY HS+ I HR++K N+LL K + K+ADFG + I ++ + G
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 169
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
T GYL PE + ++ D+++ GV+L LL G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 9 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 62
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 119
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVIL 122
K +D +++ LG+G V + G+ +II KK D KLE E I
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARIC 58
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEV 180
++ H N+V+L E LV++ + G LF+ + + Y E + ++
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQI 113
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQG 237
E++AY HS+ I HR++K N+LL K + K+ADFG + I ++ + G
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAG 168
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
T GYL PE + ++ D+++ GV+L LL G P
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRI----IAVKKSKVVDESKL----EEFINEVVILSQI 125
+++ + LG+G G V LA R+ +AVK +VD + E E+ I +
Sbjct: 8 WDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXINKML 61
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NH NVVK G E + L E+ G LF + ++ + R ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVV 118
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAI-DQTHVSTKVQGTFGYLDP 244
YLH I HRDIK N+LLDE+ KI+DFG + ++ + K+ GT Y+ P
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 245 EYFRSSQF-TDKSDVYSFGVVLVELLTGQKP 274
E + +F + DV+S G+VL +L G+ P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 79 ILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+LG+G G VY G L++ IA+K+ D + E+ + + H+N+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
E + E +P G+L L + L + ++ E L YLH + I H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 131
Query: 198 RDIKSTNILLDEKYRA--KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ--FT 253
RDIK N+L++ Y KI+DFGTS+ +A T GT Y+ PE +
Sbjct: 132 RDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYG 189
Query: 254 DKSDVYSFGVVLVELLTGQKPI 275
+D++S G ++E+ TG+ P
Sbjct: 190 KAADIWSLGCTIIEMATGKPPF 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 78 RILGQGGQGTVYKGMLA------DGRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNV 130
R LG G G VY+G ++ +AVK +V E +F+ E +I+S+ NH+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD----PYEELSLTWEMRLRIATEVAEALAY 186
V+ +G L+ ++ E + G L +L + P + SL L +A ++A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLD---EKYRAKIADFGTSRSIAIDQTHVSTKVQG-----T 238
L + ++ HRDI + N LL AKI DFG +A D S +G
Sbjct: 157 LEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRASYYRKGGCAMLP 209
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISS 277
++ PE F FT K+D +SFGV+L E+ + G P S
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 249
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F++ R LG+G G VY + I+A+K KS++ E + E+ I S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALA 185
N++++ + + L+ EF P G L++ L H ++E + E+A+AL
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QRSATFMEELADALH 128
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVST----KVQGTFGY 241
Y H + HRDIK N+L+ K KIADFG S H + + GT Y
Sbjct: 129 YCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDY 178
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
L PE +K D++ GV+ E L G P S
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++L G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L++ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 140
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 43/324 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH----- 160
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 161 ---DPYEEL---SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAK 214
DP + +L+ L +++VA+ +A+L S + HRD+ + N+LL + AK
Sbjct: 148 LETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAK 204
Query: 215 IADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQ 272
I DFG +R I D + V + ++ PE +T +SDV+S+G++L E+ + G
Sbjct: 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 273 KPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGR 332
P I N + ++ D + + A + + + C
Sbjct: 265 NPYPGILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 333 NRPTMKEVAMELERIRANSRDDEN 356
+RPT +++ L+ R + +
Sbjct: 310 HRPTFQQICSFLQEQAQEDRRERD 333
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AV+ ++ S L++ EV I+ +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S + G+ Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 247 FLILNPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 111/256 (43%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AVK ++ S L++ EV I+ +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 247 FLILNPSKRGTLEQIM 262
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++L G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 140
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 141 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AVK ++ S L++ EV I+ +NH N+V
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 69
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQ 124
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G+ Y PE F+
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQG 179
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 239
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 240 FLILNPSKRGTLEQIM 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGR----IIAVKKSKVVDESKL-EEFINEVVILSQINH 127
F ++L G GTVYKG+ + +G +A+K+ + K +E ++E +++ +++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 133
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 134 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ SD+++ G ++ +L+ G P +
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AV+ ++ S L++ EV I+ +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G+ Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIEENCLFD 301
++ + DV+S GV+L L++G P E G+ +++ EN L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKK 246
Query: 302 IIDDQVRKSGEAEEIM 317
+ K G E+IM
Sbjct: 247 FLILNPSKRGTLEQIM 262
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVKKS-----KVVDESKLEEFINEVVILSQINH 127
F ++LG G GTVYKG+ + +G + + + + +E ++E +++ +++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+V +LLG CL V L+ + +P G L Y+ + + + + L ++A+ + YL
Sbjct: 111 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL 167
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFGYLDPEY 246
+ HRD+ + N+L+ KI DFG ++ + ++ + + ++ E
Sbjct: 168 EDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 247 FRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+T +SDV+S+GV + EL+T G KP I A+E
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 79 ILGQGGQGTVYKGMLA-DGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+LGQG G V K A D R A+KK + +E KL ++EV +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 138 LE-------------VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
LE + E+ N TL+ +H E L+ + R+ ++ EAL
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEAL 129
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-------AIDQTHVS----- 232
+Y+HS I HR++K NI +DE KI DFG ++++ +D ++
Sbjct: 130 SYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 233 -TKVQGTFGYLDPEYFR-SSQFTDKSDVYSFGVVLVELL 269
T GT Y+ E + + +K D YS G++ E +
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLA-DGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D + + +++G G G V G L G+ +A+K K E + +F++E
Sbjct: 27 AKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE 84
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H NV+ L G + +++ EF+ NG+L +L + T + +
Sbjct: 85 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLR 142
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
+A + YL Y+ HRD+ + NIL++ K++DFG SR + D T T
Sbjct: 143 GIAAGMKYLADMNYV---HRDLAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSAL 198
Query: 239 FG-----YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 199 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDE----SKLEEFINE 118
K+ D+ Y+ ++ +G GG V + G ++A+K ++D+ S L E
Sbjct: 2 PKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTE 58
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
+ L + H+++ +L +V E+ P G LF Y+ + L+ E +
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRVVFR 115
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
++ A+AY+HS Y HRD+K N+L DE ++ K+ DFG ++ + G+
Sbjct: 116 QIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGS 172
Query: 239 FGYLDPEYFRSSQFT-DKSDVYSFGVVLVELLTGQKPI 275
Y PE + + ++DV+S G++L L+ G P
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVKKSKVVDESKL-----EEFINEVVILSQINHR 128
R+L G+G K LA GR +A+K ++D+++L ++ EV I+ +NH
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAY 186
N+VKL + L+ E+ G +F YL H +E + R ++ A+ Y
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQY 126
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ---GTFGYLD 243
H I HRD+K+ N+LLD KIADFG S V K+ G+ Y
Sbjct: 127 CHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-----VGGKLDTFCGSPPYAA 178
Query: 244 PEYFRSSQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIE 295
PE F+ ++ + DV+S GV+L L++G P E G+ +++
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 238
Query: 296 ENCLFDIIDDQVRKSGEAEEIM 317
EN L + K G E+IM
Sbjct: 239 ENLLKRFLVLNPIKRGTLEQIM 260
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 141/324 (43%), Gaps = 43/324 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLH----- 160
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 90 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV 147
Query: 161 ---DP-YEELSLTWEMR--LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAK 214
DP + + T R L +++VA+ +A+L S + HRD+ + N+LL + AK
Sbjct: 148 LETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAK 204
Query: 215 IADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQ 272
I DFG +R I D + V + ++ PE +T +SDV+S+G++L E+ + G
Sbjct: 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 264
Query: 273 KPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGR 332
P I N + ++ D + + A + + + C
Sbjct: 265 NPYPGILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 333 NRPTMKEVAMELERIRANSRDDEN 356
+RPT +++ L+ R + +
Sbjct: 310 HRPTFQQICSFLQEQAQEDRRERD 333
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
K + F +ILG+G TV LA R A+K K ++ E+K+ E ++S+
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEA 183
++H VKL + E + NG L +Y+ ++ E R T E+ A
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSA 119
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYL 242
L YLH I HRD+K NILL+E +I DFGT++ ++ + + GT Y+
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
PE SD+++ G ++ +L+ G P +
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
K + F +ILG+G TV LA R A+K K ++ E+K+ E ++S+
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEA 183
++H VKL + E + NG L +Y+ ++ E R T E+ A
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSA 121
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYL 242
L YLH I HRD+K NILL+E +I DFGT++ ++ + + GT Y+
Sbjct: 122 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
PE SD+++ G ++ +L+ G P +
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
K + F +ILG+G TV LA R A+K K ++ E+K+ E ++S+
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEA 183
++H VKL + E + NG L +Y+ ++ E R T E+ A
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSA 120
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYL 242
L YLH I HRD+K NILL+E +I DFGT++ ++ + + GT Y+
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
PE SD+++ G ++ +L+ G P +
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 150
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 38/262 (14%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVKKSKVVDESKL-----EEFINEVVILSQINHR 128
R+L G+G K LA GR +A+K ++D+++L ++ EV I+ +NH
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAY 186
N+VKL + L+ E+ G +F YL H +E + R ++ A+ Y
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQY 129
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ---GTFGYLD 243
H I HRD+K+ N+LLD KIADFG S ++ V K+ G Y
Sbjct: 130 CHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAPPYAA 181
Query: 244 PEYFRSSQFT-DKSDVYSFGVVLVELLTGQKPISSIWANE-------GRNLTTYFVECIE 295
PE F+ ++ + DV+S GV+L L++G P E G+ +++
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDC 241
Query: 296 ENCLFDIIDDQVRKSGEAEEIM 317
EN L + K G E+IM
Sbjct: 242 ENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 152
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGG-QGTVYKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 80 LGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
+G+G G V G+ +AVKK + + + E NEVVI+ +H NVV + L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 139 EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHR 198
+ +V EF+ G L D + E + V AL+YLH+ + HR
Sbjct: 113 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHR 165
Query: 199 DIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDV 258
DIKS +ILL R K++DFG ++ + + GT ++ PE + + D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 259 YSFGVVLVELLTGQKP 274
+S G++++E++ G+ P
Sbjct: 225 WSLGIMVIEMIDGEPP 240
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
K + F +ILG+G TV LA R A+K K ++ E+K+ E ++S+
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEA 183
++H VKL + E + NG L +Y+ ++ E R T E+ A
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSA 122
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYL 242
L YLH I HRD+K NILL+E +I DFGT++ ++ + + GT Y+
Sbjct: 123 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 243 DPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
PE SD+++ G ++ +L+ G P +
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 149
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLH 147
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F +ILG+G TV LA R A+K K ++ E+K+ E ++S+++H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLH 188
VKL + E + NG L +Y+ ++ E R T E+ AL YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV-STKVQGTFGYLDPEYF 247
I HRD+K NILL+E +I DFGT++ ++ + + GT Y+ PE
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
SD+++ G ++ +L+ G P +
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 52/329 (15%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYK----GMLADGRIIAV-----KKSKV 106
ID ++ +++ + + + LG G G V + G+ + ++ V K +
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 107 VDESKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL------ 159
DE E ++E+ I+S + H N+V LLG C L++ E+ G L +L
Sbjct: 75 ADEK--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 132
Query: 160 ---------HDPY---EELSLTWEMR--LRIATEVAEALAYLHSSAYLPIYHRDIKSTNI 205
DP +E E+R L +++VA+ +A+L S + HRD+ + N+
Sbjct: 133 MLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNV 189
Query: 206 LLDEKYRAKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVV 264
LL + AKI DFG +R I D + V + ++ PE +T +SDV+S+G++
Sbjct: 190 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 249
Query: 265 LVELLT-GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVA 323
L E+ + G P I N + ++ D + + A + +
Sbjct: 250 LWEIFSLGLNPYPGILVNSK---------------FYKLVKDGYQMAQPAFAPKNIYSIM 294
Query: 324 KRCLNSYGRNRPTMKEVAMELERIRANSR 352
+ C +RPT +++ L+ R
Sbjct: 295 QACWALEPTHRPTFQQICSFLQEQAQEDR 323
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 37/278 (13%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKK---SKVVDESKLEEFINEVVILS 123
D F+ R +G G G VY + + ++A+KK S K ++ I EV L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGT--LFQYLHDPYEELSLTWEMRLRIATEVA 181
++ H N ++ GC L LV E+ L + P +E+ + +
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGAL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ LAYLHS + HRD+K+ NILL E K+ DFG++ +A V GT +
Sbjct: 126 QGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYW 177
Query: 242 LDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENC 298
+ PE + Q+ K DV+S G+ +EL + P+ ++ A Y + E
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPA 233
Query: 299 LFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPT 336
L +SG E + CL ++RPT
Sbjct: 234 L---------QSGHWSEYF--RNFVDSCLQKIPQDRPT 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 37/278 (13%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKK---SKVVDESKLEEFINEVVILS 123
D F+ R +G G G VY + + ++A+KK S K ++ I EV L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGT--LFQYLHDPYEELSLTWEMRLRIATEVA 181
++ H N ++ GC L LV E+ L + P +E+ + +
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGAL 164
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ LAYLHS + HRD+K+ NILL E K+ DFG++ +A V GT +
Sbjct: 165 QGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYW 216
Query: 242 LDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENC 298
+ PE + Q+ K DV+S G+ +EL + P+ ++ A Y + E
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPA 272
Query: 299 LFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPT 336
L +SG E + CL ++RPT
Sbjct: 273 L---------QSGHWSEYF--RNFVDSCLQKIPQDRPT 299
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 42/260 (16%)
Query: 78 RILGQGGQGTVYK----GMLA--DGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNV 130
R +G+G G V++ G+L ++AVK K + ++ +F E ++++ ++ N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLH--DPYEELSLTWE----------------- 171
VKLLG C + L++E++ G L ++L P+ SL+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 172 --MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQ 228
+L IA +VA +AYL ++ HRD+ + N L+ E KIADFG SR+I + D
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLT 287
++ PE +++T +SDV+++GVVL E+ + G +P + E
Sbjct: 230 YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE----V 285
Query: 288 TYFVE-----CIEENCLFDI 302
Y+V ENC ++
Sbjct: 286 IYYVRDGNILACPENCPLEL 305
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 73 YFNMNRILGQGGQGTVY----KGMLADGRIIAVKKS-----KVVDESK-----LEEFINE 118
YF + R LG G G V K ++ I +KKS + D++K EE NE
Sbjct: 38 YFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRI 176
+ +L ++H N++KL + + LV EF G LF+ + ++E I
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NI 151
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEK---YRAKIADFGTSRSIAIDQTHVST 233
++ + YLH I HRDIK NILL+ K KI DFG S + D +
Sbjct: 152 MKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLR 206
Query: 234 KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVEC 293
GT Y+ PE + ++ +K DV+S GV++ LL G P G+N ++
Sbjct: 207 DRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFG------GQN-DQDIIKK 258
Query: 294 IEENCLFDIIDDQVRKSGEAEE---IMAVSDVAKRCLNSYGRNRPTMKEVA 341
+E+ + +D S EA+E +M D KRC N +K+ A
Sbjct: 259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 84 GQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
G+G K LA GR +AVK ++ + L++ EV I+ +NH N+VKL
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI 83
Query: 138 LEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ LV E+ G +F YL H +E + R ++ A+ Y H I
Sbjct: 84 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKY---I 135
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ---GTFGYLDPEYFRSSQF 252
HRD+K+ N+LLD KIADFG S V K+ G+ Y PE F+ ++
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFT-----VGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 253 T-DKSDVYSFGVVLVELLTGQKPISSIWANEGRNL 286
+ DV+S GV+L L++G P +G+NL
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF------DGQNL 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 19/222 (8%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGMLA-DGR---IIAVKKSKV-VDESKLEEFINE 118
SKE+D + + +++G G G V G L G+ +A+K K E + +F++E
Sbjct: 1 SKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE 58
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H NV+ L G + +++ EF+ NG+L +L + ++ + +
Sbjct: 59 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI--QLVGMLR 116
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
+A + YL Y+ HR + + NIL++ K++DFG SR + D T T
Sbjct: 117 GIAAGMKYLADMNYV---HRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSAL 172
Query: 239 FG-----YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
G + PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 173 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 15/219 (6%)
Query: 64 SKELDKATDYFNMNRILGQGGQGTVYKGML-ADGR---IIAVKKSKV-VDESKLEEFINE 118
+KE+D + + +++G G G V G L G+ +A+K K + + +F++E
Sbjct: 23 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 80
Query: 119 VVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT 178
I+ Q +H N++ L G + + +++ E++ NG+L +L + T + +
Sbjct: 81 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLR 138
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
+ + YL + + HRD+ + NIL++ K++DFG SR + D T G
Sbjct: 139 GIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 239 FG--YLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKP 274
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 78 RILGQGGQGTVYK----GMLADGRII--AVKKSK-VVDESKLEEFINEVVILSQI-NHRN 129
++LG G G V G+ G I AVK K D S+ E ++E+ +++Q+ +H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS--------------------LT 169
+V LLG C L++E+ G L YL E+ S LT
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQT 229
+E L A +VA+ + +L + + HRD+ + N+L+ KI DFG +R I D
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 230 H-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSI 278
+ V + ++ PE +T KSDV+S+G++L E+ + G P I
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV---VDESKLEEFINEVVILSQINHRN 129
F + + +G+G VY+ L DG +A+KK ++ +D + I E+ +L Q+NH N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRL-RIATEVAEALAYLH 188
V+K +E +V E G L + + ++ L E + + ++ AL ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S + HRDIK N+ + K+ D G R + +T + + GT Y+ PE
Sbjct: 154 SRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIH 209
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + KSD++S G +L E+ Q P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVKKSKVVD-ESKLEEFINEVVILSQINHRN 129
D + + ++G G V A + +A+K+ + ++ ++E + E+ +SQ +H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-----PYEELSLTWEMRLRIATEVAEAL 184
+V + + LV + + G++ + ++ L I EV E L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTF----G 240
YLH + + HRD+K+ NILL E +IADFG S +A KV+ TF
Sbjct: 135 EYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 241 YLDPEYFRSSQFTD-KSDVYSFGVVLVELLTGQKP 274
++ PE + D K+D++SFG+ +EL TG P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGR-IIAVKKSKVVD-ESKLEEFINEVVILSQINHRN 129
D + + ++G G V A + +A+K+ + ++ ++E + E+ +SQ +H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHD-----PYEELSLTWEMRLRIATEVAEAL 184
+V + + LV + + G++ + ++ L I EV E L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA----IDQTHVSTKVQGTFG 240
YLH + + HRD+K+ NILL E +IADFG S +A I + V GT
Sbjct: 130 EYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 241 YLDPEYFRSSQFTD-KSDVYSFGVVLVELLTGQKP 274
++ PE + D K+D++SFG+ +EL TG P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 47/275 (17%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
+ + LG G G V+ +AVK K S +E F+ E ++ + H +VKL
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL 242
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLH------DPYEELSLTWEMRLRIATEVAEALAYL 187
+ + ++ EF+ G+L +L P +L + + ++AE +A++
Sbjct: 243 HAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKL-------IDFSAQIAEGMAFI 294
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
Y+ HRD+++ NIL+ KIADFG +R V K + PE
Sbjct: 295 EQRNYI---HRDLRAANILVSASLVCKIADFGLAR--------VGAKF--PIKWTAPEAI 341
Query: 248 RSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEG-RNLTTYFVECIEENCLFDIIDD 305
FT KSDV+SFG++L+E++T G+ P + E R L + ENC
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC------- 394
Query: 306 QVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
EE+ ++ RC + RPT + +
Sbjct: 395 -------PEELY---NIMMRCWKNRPEERPTFEYI 419
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 80 LGQGGQGTV---YKGMLAD--GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V L D G ++AVK+ + + +F E+ IL ++ +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 135 GCCLEVEVP--LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G P LV E++P+G L +L L L ++++ + + YL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + NIL++ + KIADFG ++ + +D+ V Q + PE +
Sbjct: 133 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 251 QFTDKSDVYSFGVVLVELLT 270
F+ +SDV+SFGVVL EL T
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 78 RILGQGGQGTVYKGMLA----DGRIIAVK--KSKVVDESKLEEFINEVVILSQINHRNVV 131
R+L G+G K LA G+ +AVK ++ S L++ EV I +NH N+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIV 76
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHS 189
KL + LV E+ G +F YL H +E + R ++ A+ Y H
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQ 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K+ N+LLD KIADFG S G Y PE F+
Sbjct: 132 KF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKPISSIWANEGRNL 286
++ + DV+S GV+L L++G P +G+NL
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF------DGQNL 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 125/280 (44%), Gaps = 26/280 (9%)
Query: 69 KATDYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV--VDESKLEEFINEVVILSQI 125
+A DY + I G G G K +DG+I+ K+ + E++ + ++EV +L ++
Sbjct: 4 RAEDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 126 NHRNVVKLLGCCLEVEVPLL--VYEFIPNGTLFQYLHDPYEELS-LTWEMRLRIATEVAE 182
H N+V+ ++ L V E+ G L + +E L E LR+ T++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 183 ALAYLH--SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
AL H S + HRD+K N+ LD K K+ DFG +R + D + T V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPY 181
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLF 300
Y+ PE + +KSD++S G +L EL P ++ E I E
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LAGKIREGKFR 234
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I R S E EI+ R LN +RP+++E+
Sbjct: 235 RI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQG-----TVYKGMLADGRI-IAVKKSKVVDE 109
ID ++ + + + + + LG G G T Y + +D + +AVK K
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 110 -SKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL- 166
++ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L +
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 126
Query: 167 --------------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
+L E L + +VA+ +A+L S + HRD+ + NILL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRI 183
Query: 213 AKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT- 270
KI DFG +R I D + V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243
Query: 271 GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSY 330
G P G + + F + I+E F ++ + AE + D+ K C ++
Sbjct: 244 GSSPY------PGMPVDSKFYKMIKEG--FRMLSPE---HAPAE----MYDIMKTCWDAD 288
Query: 331 GRNRPTMKEVAMELER 346
RPT K++ +E+
Sbjct: 289 PLKRPTFKQIVQLIEK 304
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQG-----TVYKGMLADGRI-IAVKKSKVVDE 109
ID ++ + + + + + LG G G T Y + +D + +AVK K
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 110 -SKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL- 166
++ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L +
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 167 --------------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
+L E L + +VA+ +A+L S + HRD+ + NILL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRI 206
Query: 213 AKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT- 270
KI DFG +R I D + V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
Query: 271 GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSY 330
G P G + + F + I+E F ++ + AE + D+ K C ++
Sbjct: 267 GSSPYP------GMPVDSKFYKMIKEG--FRMLSPE---HAPAE----MYDIMKTCWDAD 311
Query: 331 GRNRPTMKEVAMELER 346
RPT K++ +E+
Sbjct: 312 PLKRPTFKQIVQLIEK 327
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 74 FNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
F ++G GG G V+K DG+ +K+ K +E K E EV L++++H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAE---REVKALAKLDHVNIVH 68
Query: 133 LLGC---------------------CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
GC CL +++ EF GTL Q++ E L
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQM-----EFCDKGTLEQWIEKRRGE-KLDKV 122
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+ L + ++ + + Y+HS + +RD+K +NI L + + KI DFG S+ D
Sbjct: 123 LALELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX 179
Query: 232 STKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
+K GT Y+ PE S + + D+Y+ G++L ELL
Sbjct: 180 RSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F R+LG+G G V + + G + AVK K ++ + +E + E ILS +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 128 RNVVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALA 185
+ L CC + L V EF+ G L ++ ++ E R R A E+ AL
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISALM 138
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K N+LLD + K+ADFG + + +T GT Y+ PE
Sbjct: 139 FLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPE 194
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ + D ++ GV+L E+L G P +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQG-----TVYKGMLADGRI-IAVKKSKVVDE 109
ID ++ + + + + + LG G G T Y + +D + +AVK K
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 110 -SKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL- 166
++ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L +
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 149
Query: 167 --------------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
+L E L + +VA+ +A+L S + HRD+ + NILL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRI 206
Query: 213 AKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT- 270
KI DFG +R I D + V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 207 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 266
Query: 271 GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSY 330
G P G + + F + I+E F ++ + AE + D+ K C ++
Sbjct: 267 GSSPYP------GMPVDSKFYKMIKEG--FRMLSPE---HAPAE----MYDIMKTCWDAD 311
Query: 331 GRNRPTMKEVAMELER 346
RPT K++ +E+
Sbjct: 312 PLKRPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQG-----TVYKGMLADGRI-IAVKKSKVVDE 109
ID ++ + + + + + LG G G T Y + +D + +AVK K
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 110 -SKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL- 166
++ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L +
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 142
Query: 167 --------------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
+L E L + +VA+ +A+L S + HRD+ + NILL
Sbjct: 143 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRI 199
Query: 213 AKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT- 270
KI DFG +R I D + V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 200 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 259
Query: 271 GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSY 330
G P G + + F + I+E F ++ + AE + D+ K C ++
Sbjct: 260 GSSPYP------GMPVDSKFYKMIKEG--FRMLSPE---HAPAE----MYDIMKTCWDAD 304
Query: 331 GRNRPTMKEVAMELER 346
RPT K++ +E+
Sbjct: 305 PLKRPTFKQIVQLIEK 320
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 56 IDRCRIFNSKELDKATDYFNMNRILGQGGQG-----TVYKGMLADGRI-IAVKKSKVVDE 109
ID ++ + + + + + LG G G T Y + +D + +AVK K
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 110 -SKLEEFINEVVILSQI-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL- 166
++ E ++E+ +LS + NH N+V LLG C L++ E+ G L +L +
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI 144
Query: 167 --------------SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR 212
+L E L + +VA+ +A+L S + HRD+ + NILL
Sbjct: 145 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRI 201
Query: 213 AKIADFGTSRSIAIDQTH-VSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT- 270
KI DFG +R I D + V + ++ PE + +T +SDV+S+G+ L EL +
Sbjct: 202 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 261
Query: 271 GQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSY 330
G P G + + F + I+E F ++ + AE + D+ K C ++
Sbjct: 262 GSSPYP------GMPVDSKFYKMIKEG--FRMLSPE---HAPAE----MYDIMKTCWDAD 306
Query: 331 GRNRPTMKEVAMELER 346
RPT K++ +E+
Sbjct: 307 PLKRPTFKQIVQLIEK 322
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 29/294 (9%)
Query: 80 LGQGGQGTV---YKGMLAD--GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V L D G ++AVK+ + + +F E+ IL ++ +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G + LV E++P+G L +L L L ++++ + + YL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + NIL++ + KIADFG ++ + +D+ + V Q + PE +
Sbjct: 136 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKS 310
F+ +SDV+SFGVVL EL T + ++ + + F+ + + +
Sbjct: 193 IFSRQSDVWSFGVVLYELFT--------YCDKSCSPSAEFLRMMGSERDVPALSRLLELL 244
Query: 311 GEAEEIMA-------VSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDENN 357
E + + A V ++ K C ++RP+ + +L+ + + SR E +
Sbjct: 245 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 44/292 (15%)
Query: 80 LGQGGQGTVYKGML---ADG---RIIAVKKSKVVDESKL-EEFINEVVILSQINHRNVVK 132
LG+ G VYKG L A G + +A+K K E L EEF +E ++ +++ H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMR-----------LRIATE 179
LLG + + +++ + +G L ++L P+ ++ T + R + + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGT 238
+A + YL S + H+D+ + N+L+ +K KI+D G R + A D +
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEEN 297
++ PE +F+ SD++S+GVVL E+ + G +P ++N+ VE I
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQD------VVEMIRNR 246
Query: 298 CLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRA 349
+ DD V + C N + RP K++ R+RA
Sbjct: 247 QVLPCPDDCP---------AWVYALMIECWNEFPSRRPRFKDIH---SRLRA 286
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 80 LGQGGQGTV---YKGMLAD--GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V L D G ++AVK+ + + +F E+ IL ++ +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G + LV E++P+G L +L L L ++++ + + YL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + NIL++ + KIADFG ++ + +D+ + V Q + PE +
Sbjct: 149 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI--IDDQVR 308
F+ +SDV+SFGVVL EL T + ++ + + F+ + C D+ + +
Sbjct: 206 IFSRQSDVWSFGVVLYELFT--------YCDKSCSPSAEFLRMM--GCERDVPALSRLLE 255
Query: 309 KSGEAEEIMA-------VSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDENN 357
E + + A V ++ K C ++RP+ + +L+ + + SR E +
Sbjct: 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 311
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 80 LGQGGQGTV---YKGMLAD--GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL 134
LG+G G+V L D G ++AVK+ + + +F E+ IL ++ +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 135 GCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
G + LV E++P+G L +L L L ++++ + + YL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH--VSTKVQGTFGYLDPEYFRSS 250
+ HRD+ + NIL++ + KIADFG ++ + +D+ + V Q + PE +
Sbjct: 137 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDI-------- 302
F+ +SDV+SFGVVL EL T + ++ + + F+ + C D+
Sbjct: 194 IFSRQSDVWSFGVVLYELFT--------YCDKSCSPSAEFLRMM--GCERDVPALCRLLE 243
Query: 303 -IDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDENN 357
+++ R V ++ K C ++RP+ + +L+ + + SR E +
Sbjct: 244 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 299
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 44/292 (15%)
Query: 80 LGQGGQGTVYKGML---ADG---RIIAVKKSKVVDESKL-EEFINEVVILSQINHRNVVK 132
LG+ G VYKG L A G + +A+K K E L EEF +E ++ +++ H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMR-----------LRIATE 179
LLG + + +++ + +G L ++L P+ ++ T + R + + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI-AIDQTHVSTKVQGT 238
+A + YL S + H+D+ + N+L+ +K KI+D G R + A D +
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEEN 297
++ PE +F+ SD++S+GVVL E+ + G +P ++N+ VE I
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQD------VVEMIRNR 263
Query: 298 CLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRA 349
+ DD V + C N + RP K++ R+RA
Sbjct: 264 QVLPCPDDCP---------AWVYALMIECWNEFPSRRPRFKDIH---SRLRA 303
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFI-NEVVILSQI 125
F + ++LG G G V+ G + +KK+ +V ++K E E +L I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 126 NHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
+ L + E L L+ ++I G LF +L E E+++ + E+ AL
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVG-EIVLAL 172
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+LH L I +RDIK NILLD + DFG S+ D+T + GT Y+ P
Sbjct: 173 EHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 245 EYFR--SSQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ R S D +S GV++ ELLTG P +
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 80 LGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
LG G G VYK G LA ++I K E +LE++I E+ IL+ +H +VKL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYIVEIEILATCDHPYIVKL 73
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
LG ++ EF P G + + + + LT + ++ EAL +LHS
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSKR-- 129
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTS-RSIAIDQTHVSTKVQGTFGYLDPEY-----F 247
I HRD+K+ N+L+ + ++ADFG S +++ Q S GT ++ PE
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETM 186
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + + K+D++S G+ L+E+ + P
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 80 LGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
LG G G VYK G LA ++I K E +LE++I E+ IL+ +H +VKL
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYIVEIEILATCDHPYIVKL 81
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
LG ++ EF P G + + + + LT + ++ EAL +LHS
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSKR-- 137
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTS-RSIAIDQTHVSTKVQGTFGYLDPEY-----F 247
I HRD+K+ N+L+ + ++ADFG S +++ Q S GT ++ PE
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETM 194
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + + K+D++S G+ L+E+ + P
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 69 KATDYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV--VDESKLEEFINEVVILSQI 125
+A DY + I G G G K +DG+I+ K+ + E++ + ++EV +L ++
Sbjct: 4 RAEDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 126 NHRNVVKLLGCCLEVEVPLL--VYEFIPNGTLFQYLHDPYEELS-LTWEMRLRIATEVAE 182
H N+V+ ++ L V E+ G L + +E L E LR+ T++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 183 ALAYLH--SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
AL H S + HRD+K N+ LD K K+ DFG +R + D + V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPY 181
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLF 300
Y+ PE + +KSD++S G +L EL P ++ E I E
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LAGKIREGKFR 234
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I R S E EI+ R LN +RP+++E+
Sbjct: 235 RI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 29/253 (11%)
Query: 55 SIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVV 107
S DR + N+ + K TD FN +LG+G G V MLAD + I +KK V+
Sbjct: 3 SEDRKQPSNNLDRVKLTD-FNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVI 58
Query: 108 DESKLEEFINEVVILSQINHRNVVKLLGCCLE-VEVPLLVYEFIPNGTLFQYLHD--PYE 164
+ +E + E +L+ ++ + L C + V+ V E++ G L ++ ++
Sbjct: 59 QDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFK 118
Query: 165 ELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI 224
E + A E++ L +LH I +RD+K N++LD + KIADFG +
Sbjct: 119 EPQAVF-----YAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH 170
Query: 225 AIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGR 284
+D + + GT Y+ PE + D +++GV+L E+L GQ P +G
Sbjct: 171 MMDGV-TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF------DGE 223
Query: 285 NLTTYFVECIEEN 297
+ F +E N
Sbjct: 224 DEDELFQSIMEHN 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 71 TDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
TD + + +G+G V + G +II KK D KLE E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ H N+V+L E LV++ + G LF+ + + Y E + ++ E
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE 114
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTF 239
A+ + H + + HRD+K N+LL K + K+ADFG + + DQ GT
Sbjct: 115 AVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTP 170
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
GYL PE R + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 69 KATDYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV--VDESKLEEFINEVVILSQI 125
+A DY + I G G G K +DG+I+ K+ + E++ + ++EV +L ++
Sbjct: 4 RAEDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 126 NHRNVVKLLGCCLEVEVPLL--VYEFIPNGTLFQYLHDPYEELS-LTWEMRLRIATEVAE 182
H N+V+ ++ L V E+ G L + +E L E LR+ T++
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 183 ALAYLH--SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
AL H S + HRD+K N+ LD K K+ DFG +R + D+ V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPY 181
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLF 300
Y+ PE + +KSD++S G +L EL P ++ E I E
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LAGKIREGKFR 234
Query: 301 DIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I R S E EI+ R LN +RP+++E+
Sbjct: 235 RI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 74 FNMNRILGQGGQGTVYKG-MLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F + +LG+G VY+ + G +A+K K + ++ NEV I Q+ H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+++L + LV E NG + +YL + + S E R ++ + YLHS
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN-EAR-HFMHQIITGMLYLHS 130
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+ +N+LL KIADFG + + + T + GT Y+ PE
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATR 186
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISS 277
S +SDV+S G + LL G+ P +
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD---ESKLEEFINEVVILSQINHR 128
D++ + LG G G VYK + ++A +KV+D E +LE+++ E+ IL+ +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
N+VKLL ++ EF G + + + E LT + + +AL YLH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLH 152
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS----RSIAIDQTHVSTKVQGTFGYLDP 244
+ I HRD+K+ NIL K+ADFG S R+I + + GT ++ P
Sbjct: 153 DNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAP 204
Query: 245 EYFRSSQFTD-----KSDVYSFGVVLVELLTGQKP 274
E D K+DV+S G+ L+E+ + P
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 50/231 (21%)
Query: 74 FNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
F ++G GG G V+K DG+ +++ K +E K E EV L++++H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-KAE---REVKALAKLDHVNIVH 69
Query: 133 LLGC----------------------------------CLEVEVPLLVYEFIPNGTLFQY 158
GC CL +++ EF GTL Q+
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQM-----EFCDKGTLEQW 124
Query: 159 LHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADF 218
+ E L + L + ++ + + Y+HS + HRD+K +NI L + + KI DF
Sbjct: 125 IEKRRGE-KLDKVLALELFEQITKGVDYIHSKKLI---HRDLKPSNIFLVDTKQVKIGDF 180
Query: 219 GTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
G S+ D T+ +GT Y+ PE S + + D+Y+ G++L ELL
Sbjct: 181 GLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 71 TDYFNMNRILGQGGQGTVY----KGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
+D + + LG G G V K A+ I +KKS V S ++EV +L Q++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQ--YLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++KL + LV E G LF L + E+ M+ +V
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK-----QVLSGT 134
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQ---GT 238
YLH I HRD+K N+LL+ K R KI DFG S V K++ GT
Sbjct: 135 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGT 186
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
Y+ PE R ++ +K DV+S GV+L LL G P
Sbjct: 187 AYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 79 ILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFI--NEVVILSQINHRNVVKLLG 135
++G+G G V K D GRI+A+KK D+ K+ + I E+ +L Q+ H N+V LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELS--LTWEMRLRIATEVAEALAYLHSSAYL 193
C + + LV+EF+ + L D E L +++ + ++ + + HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS-QF 252
I HRDIK NIL+ + K+ DFG +R++A +V T Y PE ++
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKY 202
Query: 253 TDKSDVYSFGVVLVELLTGQK---------PISSIWANEGRNLTTYFVECIEENCLFDII 303
DV++ G ++ E+ G+ + I G NL E +N +F +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG-NLIPRHQELFNKNPVFAGV 261
Query: 304 DDQVRKSGEAEEIM------AVSDVAKRCLNSYGRNRPTMKEV 340
K E E V D+AK+CL+ RP E+
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 71 TDYFNMNRILGQGGQGTVY----KGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
+D + + LG G G V K A+ I +KKS V S ++EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQ--YLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++KL + LV E G LF L + E+ M+ +V
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK-----QVLSGT 117
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQ---GT 238
YLH I HRD+K N+LL+ K R KI DFG S V K++ GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-----EVGGKMKERLGT 169
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
Y+ PE R ++ +K DV+S GV+L LL G P
Sbjct: 170 AYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVV--------ILSQ 124
++ ++G+G V + + A G AVK +V E E + EV IL Q
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 125 I-NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
+ H +++ L+ LV++ + G LF YL E+++L+ + I + EA
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEA 212
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
+++LH++ I HRD+K NILLD+ + +++DFG S ++ ++ GT GYL
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF--SCHLEPGEKLRELCGTPGYLA 267
Query: 244 PEYFRSSQ------FTDKSDVYSFGVVLVELLTGQKPI 275
PE + S + + D+++ GV+L LL G P
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 74 FNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVV 131
F + ++G G G VYKG + G++ A+K V + + EE E+ +L + +HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 132 KLLGCCLEVEVP------LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
G ++ P LV EF G++ + + + +L E I E+ L+
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLS 143
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS----RSIAIDQTHVSTKVQGTFGY 241
+LH + HRDIK N+LL E K+ DFG S R++ T + GT +
Sbjct: 144 HLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-----GTPYW 195
Query: 242 LDPEYFRSSQFTD-----KSDVYSFGVVLVELLTGQKPI 275
+ PE + D KSD++S G+ +E+ G P+
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKV--VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+G+G G VYK + GRI+A+K+ ++ DE I E+ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLHSSAYLPIY 196
LV+EF+ L + L + L + +++I ++ +A+ H I
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQHR---IL 141
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR-SSQFTDK 255
HRD+K N+L++ K+ADFG +R+ I + +V T Y P+ S +++
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 256 SDVYSFGVVLVELLTGQKPI 275
D++S G + E++TG KP+
Sbjct: 201 VDIWSIGCIFAEMITG-KPL 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKV--VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+G+G G VYK + GRI+A+K+ ++ DE I E+ +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT-EVAEALAYLHSSAYLPIY 196
LV+EF+ L + L + L + +++I ++ +A+ H I
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQHR---IL 141
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR-SSQFTDK 255
HRD+K N+L++ K+ADFG +R+ I + +V T Y P+ S +++
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 256 SDVYSFGVVLVELLTGQKPI 275
D++S G + E++TG KP+
Sbjct: 201 VDIWSIGCIFAEMITG-KPL 219
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 63 NSKELDKATDY-----FNMNRILGQGGQGTVYKGMLAD-GRIIA---VKKSKVVDESKLE 113
N++E KA+ F++ R++G+G V L RI A VKK V D+ ++
Sbjct: 6 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDID 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYEELSLTWEM 172
E + Q ++ + L C + E L V E++ G L ++ + L E
Sbjct: 66 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEH 122
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS 232
+ E++ AL YLH I +RD+K N+LLD + K+ D+G + + +
Sbjct: 123 ARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTT 178
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
+ GT Y+ PE R + D ++ GV++ E++ G+ P + +++ + T
Sbjct: 179 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT---- 234
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNR 334
E+ LF +I ++ + + + A S V K LN + R
Sbjct: 235 ---EDYLFQVILEKQIRIPRSMSVKAAS-VLKSFLNKDPKER 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD---ESKLEEFINEVVILSQINHR 128
D++ + LG G G VYK + ++A +KV+D E +LE+++ E+ IL+ +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
N+VKLL ++ EF G + + + E LT + + +AL YLH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLH 152
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS----RSIAIDQTHVSTKVQGTFGYLDP 244
+ I HRD+K+ NIL K+ADFG S R I + + GT ++ P
Sbjct: 153 DNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAP 204
Query: 245 EYFRSSQFTD-----KSDVYSFGVVLVELLTGQKP 274
E D K+DV+S G+ L+E+ + P
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 63 NSKELDKATDY-----FNMNRILGQGGQGTVYKGMLAD-GRIIA---VKKSKVVDESKLE 113
N++E KA+ F++ R++G+G V L RI A VKK V D+ ++
Sbjct: 38 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDID 97
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYEELSLTWEM 172
E + Q ++ + L C + E L V E++ G L ++ + L E
Sbjct: 98 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEH 154
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS 232
+ E++ AL YLH I +RD+K N+LLD + K+ D+G + + +
Sbjct: 155 ARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTT 210
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
+ GT Y+ PE R + D ++ GV++ E++ G+ P + +++ + T
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT---- 266
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNR 334
E+ LF +I ++ + + + A S V K LN + R
Sbjct: 267 ---EDYLFQVILEKQIRIPRSLSVKAAS-VLKSFLNKDPKER 304
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 23/215 (10%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLAD------GRIIAVKKSKVVDESKLEEFINEVVILSQ 124
TD + + LG+G V + M +II KK D KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ H N+V+L E LV++ + G LF+ + + Y E + ++ E
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE 114
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTF 239
++ + H + I HRD+K N+LL K + K+ADFG + + DQ GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTP 170
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GYL PE R + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G TVYKG+ G +A+K+ K+ +E I E+ ++ ++ H N+V+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPY---EELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
LV+EF+ N L +Y+ L + ++ + LA+ H +
Sbjct: 73 HTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--- 128
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-FT 253
I HRD+K N+L++++ + K+ DFG +R+ I S++V T Y P+ S+ ++
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYS 187
Query: 254 DKSDVYSFGVVLVELLTGQKPI 275
D++S G +L E++TG KP+
Sbjct: 188 TSIDIWSCGCILAEMITG-KPL 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 71 TDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
TD + + LG+G V + G +II KK D KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ H N+V+L E LV++ + G LF+ + + Y E + ++ E
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE 114
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTF 239
++ + H + I HRD+K N+LL K + K+ADFG + + DQ GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTP 170
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
GYL PE R + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F++ R++G+G V L RI A VKK V D+ ++ E + Q ++
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 130 VVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
+ L C + E L V E++ G L ++ + L E + E++ AL YLH
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLH 127
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
I +RD+K N+LLD + K+ D+G + + ++ GT Y+ PE R
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILR 183
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVR 308
+ D ++ GV++ E++ G+ P + +++ + T E+ LF +I ++
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-------EDYLFQVILEKQI 236
Query: 309 KSGEAEEIMAVSDVAKRCLNSYGRNR 334
+ + + A S V K LN + R
Sbjct: 237 RIPRSLSVKAAS-VLKSFLNKDPKER 261
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVD---ESKLEEFINEVVILSQINHR 128
D++ + LG G G VYK + ++A +KV+D E +LE+++ E+ IL+ +H
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
N+VKLL ++ EF G + + + E LT + + +AL YLH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLH 152
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS----RSIAIDQTHVSTKVQGTFGYLDP 244
+ I HRD+K+ NIL K+ADFG S R I + GT ++ P
Sbjct: 153 DNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAP 204
Query: 245 EYFRSSQFTD-----KSDVYSFGVVLVELLTGQKP 274
E D K+DV+S G+ L+E+ + P
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 20/266 (7%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F++ R++G+G V L RI A VKK V D+ ++ E + Q ++
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 130 VVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
+ L C + E L V E++ G L ++ + L E + E++ AL YLH
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLH 123
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
I +RD+K N+LLD + K+ D+G + + ++ GT Y+ PE R
Sbjct: 124 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILR 179
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVR 308
+ D ++ GV++ E++ G+ P + +++ + T E+ LF +I ++
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT-------EDYLFQVILEKQI 232
Query: 309 KSGEAEEIMAVSDVAKRCLNSYGRNR 334
+ + + A S V K LN + R
Sbjct: 233 RIPRSLSVKAAS-VLKSFLNKDPKER 257
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 10/213 (4%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINHRN 129
D F LG G G V K +I +K + + + I E+ +L + N
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V G + E + G+L Q L E + E+ +++ V LAYL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK---EAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE +
Sbjct: 133 KHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMAPERLQG 187
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
+ ++ +SD++S G+ LVEL G+ PI A E
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVILSQIN 126
F ++++LG+G G V+ LA+ + I A+KK V+ + +E + E +LS
Sbjct: 20 FELHKMLGKGSFGKVF---LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 127 HRNVVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYE-ELSLTWEMRLRIATEVAEAL 184
+ + C + + L V E++ G L ++ ++ +LS A E+ L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA----TFYAAEIILGL 132
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+LHS I +RD+K NILLD+ KIADFG + + + + GT Y+ P
Sbjct: 133 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIAP 188
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
E ++ D +SFGV+L E+L GQ P
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 74 FNMNRILGQGGQGTVY--KGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHR 128
F +LG G V+ K L G++ A +KKS +S LE NE+ +L +I H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHE 66
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
N+V L LV + + G LF + E T + + +V A+ YLH
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRI---LERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 189 SSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+ I HRD+K N+L +E + I DFG S+ ++Q + + GT GY+ PE
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPE 177
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
++ D +S GV+ LL G P
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVK-KSKVVDESKLEEFINEV 119
K+ + D ++ +LG G V +LA+ + ++A+K +K E K NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 120 VILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
+L +I H N+V L L+ + + G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNIL---LDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
V +A+ YLH L I HRD+K N+L LDE + I+DFG S+ D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVK-KSKVVDESKLEEFINEV 119
K+ + D ++ +LG G V +LA+ + ++A+K +K E K NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 120 VILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
+L +I H N+V L L+ + + G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNIL---LDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
V +A+ YLH L I HRD+K N+L LDE + I+DFG S+ D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 74 FNMNRILGQGGQGTVYKGMLADG----RIIA---VKKSKVVDESKLEEFIN-EVVILSQI 125
F + R+LG+GG G V++ G +I A +KK+ +V +K E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
H +V L+ L+ E++ G LF L E + E++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALG 135
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K NI+L+ + K+ DFG + D T V+ GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPE 191
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
S D +S G ++ ++LTG P +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVK-KSKVVDESKLEEFINEV 119
K+ + D ++ +LG G V +LA+ + ++A+K +K E K NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 120 VILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
+L +I H N+V L L+ + + G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNIL---LDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
V +A+ YLH L I HRD+K N+L LDE + I+DFG S+ D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 74 FNMNRILGQGGQGTVYKGMLADG----RIIA---VKKSKVVDESKLEEFIN-EVVILSQI 125
F + R+LG+GG G V++ G +I A +KK+ +V +K E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
H +V L+ L+ E++ G LF L E + E++ AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALG 135
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K NI+L+ + K+ DFG + D T V+ GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPE 191
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
S D +S G ++ ++LTG P +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + +G G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ K+ADFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGR----IIAVK-KSKVVDESKLEEFINEV 119
K+ + D ++ +LG G V +LA+ + ++A+K +K E K NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 120 VILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
+L +I H N+V L L+ + + G LF + E+ T R+ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQ 124
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNIL---LDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
V +A+ YLH L I HRD+K N+L LDE + I+DFG S+ D V +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT GY+ PE ++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGRIIA-------VKKSKVVDESKLEEFINEVVILS 123
+D + R+LG+G G V +L +I + K +V ++ E + EV +L
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVA 181
Q++H N++KL + LV E G LF + + E+ RI +V
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVL 142
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGT 238
+ Y+H + I HRD+K N+LL+ K + +I DFG S + + K+ GT
Sbjct: 143 SGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GT 197
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
Y+ PE + + +K DV+S GV+L LL+G P + ANE
Sbjct: 198 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANE 238
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+++RI+G+GG G VY AD G++ A+K K ++ + +NE ++LS ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 130 VVKLLGCCLEVEVP---LLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEAL 184
++ P + + + G L +L H + E + + A E+ L
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 304
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
++H+ + +RD+K NILLDE +I+D G + + + H S GT GY+ P
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAP 358
Query: 245 EYFRSSQFTDKS-DVYSFGVVLVELLTGQKPI 275
E + D S D +S G +L +LL G P
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+++RI+G+GG G VY AD G++ A+K K ++ + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 130 VVKLLGCCLEVEVP---LLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEAL 184
++ P + + + G L +L H + E + + A E+ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
++H+ + +RD+K NILLDE +I+D G + + + H S GT GY+ P
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAP 359
Query: 245 EYFRSSQFTDKS-DVYSFGVVLVELLTGQKPI 275
E + D S D +S G +L +LL G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+++RI+G+GG G VY AD G++ A+K K ++ + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 130 VVKLLGCCLEVEVP---LLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEAL 184
++ P + + + G L +L H + E + + A E+ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
++H+ + +RD+K NILLDE +I+D G + + + H S GT GY+ P
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAP 359
Query: 245 EYFRSSQFTDKS-DVYSFGVVLVELLTGQKPI 275
E + D S D +S G +L +LL G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+++RI+G+GG G VY AD G++ A+K K ++ + +NE ++LS ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 130 VVKLLGCCLEVEVP---LLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEAL 184
++ P + + + G L +L H + E + + A E+ L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIILGL 305
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
++H+ + +RD+K NILLDE +I+D G + + + H S GT GY+ P
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAP 359
Query: 245 EYFRSSQFTDKS-DVYSFGVVLVELLTGQKPI 275
E + D S D +S G +L +LL G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + +G G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ K+ADFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 71 TDYFNMNRILGQGGQGTVY--KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQI 125
+D + R+LG+G G V K + G+ AVK K +V ++ E + EV +L Q+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEA 183
+H N++KL + LV E G LF + + E+ RI +V
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSG 162
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFG 240
+ Y+H + I HRD+K N+LL+ K + +I DFG S + + K+ GT
Sbjct: 163 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 217
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
Y+ PE + + +K DV+S GV+L LL+G P + ANE
Sbjct: 218 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANE 256
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + +G G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ K+ADFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFIN 117
KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 118 EVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRL 174
EVV+L +++ V++LL + +L+ E + P LF ++ E +L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELAR 117
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST 233
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T
Sbjct: 118 SFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYT 171
Query: 234 KVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y PE+ R ++ +S V+S G++L +++ G P + E
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEE 219
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I F + R S E + ++ + CL +RPT +E+
Sbjct: 220 IIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 256
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 71 TDYFNMNRILGQGGQGTVY--KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQI 125
+D + R+LG+G G V K + G+ AVK K +V ++ E + EV +L Q+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEA 183
+H N++KL + LV E G LF + + E+ RI +V
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSG 138
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFG 240
+ Y+H + I HRD+K N+LL+ K + +I DFG S + + K+ GT
Sbjct: 139 ITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 193
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
Y+ PE + + +K DV+S GV+L LL+G P + ANE
Sbjct: 194 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANE 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 76 MNRILGQGGQGTVYKGMLAD-GRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNVVKL 133
++ ILGQG V++G G + A+K + + ++ + E +L ++NH+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 134 LGCCLEVEV--PLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
E +L+ EF P G+L+ L +P L L + +V + +L +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 192 YLPIYHRDIKSTNILL----DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
I HR+IK NI+ D + K+ DFG +R + D+ VS + GT YL P+ +
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMY 187
Query: 248 RSS--------QFTDKSDVYSFGVVLVELLTGQKP 274
+ ++ D++S GV TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 28/224 (12%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGRIIA-------VKKSKVVDESKLEEFINEVVILS 123
+D + R+LG+G G V +L +I + K +V ++ E + EV +L
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 124 QINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVA 181
Q++H N++KL + LV E G LF + + E+ RI +V
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVL 159
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGT 238
+ Y+H + I HRD+K N+LL+ K + +I DFG S + + K+ GT
Sbjct: 160 SGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GT 214
Query: 239 FGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
Y+ PE + + +K DV+S GV+L LL+G P + ANE
Sbjct: 215 AYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANE 255
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLA--DGRIIAVKK--------------- 103
I+ +K + + Y N RI+ QG K +L D + A+KK
Sbjct: 17 IYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKS 76
Query: 104 --SKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQY--- 158
K+ +SK ++F NE+ I++ I + + G + ++YE++ N ++ ++
Sbjct: 77 NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 159 --LHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIA 216
+ D + ++ I V + +Y+H+ I HRD+K +NIL+D+ R K++
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLS 194
Query: 217 DFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF--RSSQFTDKSDVYSFGVVLVELLTGQKP 274
DFG S + + S +GT+ ++ PE+F SS K D++S G+ L + P
Sbjct: 195 DFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
Query: 275 IS 276
S
Sbjct: 252 FS 253
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 79 ILGQGGQ-GTVYKGMLADGRIIAVKKSKVVD---ESKLEEFINEVVILSQINHRNVVKLL 134
I+G+ G G VYK + ++A +KV+D E +LE+++ E+ IL+ +H N+VKLL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
++ EF G + + + E LT + + +AL YLH +
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDNK--- 128
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTD 254
I HRD+K+ NIL K+ADFG S GT ++ PE D
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 255 -----KSDVYSFGVVLVELLTGQKP 274
K+DV+S G+ L+E+ + P
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 90
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 147
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 201
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 250
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 251 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 291
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGMLADGRI------IAVKKSKVVDESKLEEFI--NEVV 120
K +D F+ +++G+G G V +LA + + V + K + + K E+ I V
Sbjct: 36 KPSD-FHFLKVIGKGSFGKV---LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV 91
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATE 179
+L + H +V L + V ++I G LF +L + E R R A E
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAE 147
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTF 239
+A AL YLHS L I +RD+K NILLD + + DFG + I+ ++ GT
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTP 203
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
YL PE + D + G VL E+L G P S
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVILSQIN 126
F ++++LG+G G V+ LA+ + I A+KK V+ + +E + E +LS
Sbjct: 19 FILHKMLGKGSFGKVF---LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 127 HRNVVKLLGCCLEVEVPLL-VYEFIPNGTLFQYLHDPYE-ELSLTWEMRLRIATEVAEAL 184
+ + C + + L V E++ G L ++ ++ +LS A E+ L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA----TFYAAEIILGL 131
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+LHS I +RD+K NILLD+ KIADFG + + + GT Y+ P
Sbjct: 132 QFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIAP 187
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
E ++ D +SFGV+L E+L GQ P
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 15/263 (5%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G G V+K G ++A K + + + + I E+ +L + N +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ E + G+L Q L + + ++ +++ V + L YL I H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSD 257
RD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE + + ++ +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 258 VYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIM 317
++S G+ LVE+ G+ PI A E E ++ I+++ K +
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDY-----IVNEPPPKLPSGVFSL 240
Query: 318 AVSDVAKRCLNSYGRNRPTMKEV 340
D +CL R +K++
Sbjct: 241 EFQDFVNKCLIKNPAERADLKQL 263
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 69 KATDYFNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
KA DY ++ +++G+G G V A ++ A+K K +++ S F E I++
Sbjct: 73 KAEDY-DVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
N VV+L + + +V E++P G L + + ++ W EV AL
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFY--TAEVVLAL 187
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQT---HVSTKVQGTFGY 241
+HS + + HRD+K N+LLD+ K+ADFGT + +D+T H T V GT Y
Sbjct: 188 DAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGT--CMKMDETGMVHCDTAV-GTPDY 241
Query: 242 LDPEYFRSS----QFTDKSDVYSFGVVLVELLTGQKPI 275
+ PE +S + + D +S GV L E+L G P
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 182
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 231
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 232 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 272
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 76 MNRILGQGGQGTVYKGMLAD-GRIIAVKK-SKVVDESKLEEFINEVVILSQINHRNVVKL 133
++ ILGQG V++G G + A+K + + ++ + E +L ++NH+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 134 LGCCLEVEV--PLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
E +L+ EF P G+L+ L +P L L + +V + +L +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 192 YLPIYHRDIKSTNILL----DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
I HR+IK NI+ D + K+ DFG +R + D+ V + GT YL P+ +
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMY 187
Query: 248 RSS--------QFTDKSDVYSFGVVLVELLTGQKPI 275
+ ++ D++S GV TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 68 DKATDYFNMNRILGQGGQGTVY----KGMLADGRIIAVKKSKVVDESKLEEFINEVVILS 123
D +D+F + LG+G VY KG + +KK+ VD+ + E+ +L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVR---TEIGVLL 103
Query: 124 QINHRNVVKLLGCCLEVEVPL---LVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIAT 178
+++H N++KL E P LV E + G LF + + Y E ++
Sbjct: 104 RLSHPNIIKLKEI---FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----- 155
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKV 235
++ EA+AYLH + I HRD+K N+L KIADFG S+ ++ + V
Sbjct: 156 QILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKTV 210
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT GY PE R + + D++S G++ LL G +P
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLAD------GRIIAVKKSKVVDESKLEEFINEVVILSQ 124
TD + + LG+G V + + +II KK D KLE E I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE---REARICRL 86
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ H N+V+L E LV++ + G LF+ + + Y E + ++ E
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIHQILE 141
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTF 239
++ ++H I HRD+K N+LL K + K+ADFG + + +Q GT
Sbjct: 142 SVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTP 197
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
GYL PE R + D+++ GV+L LL G P
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 18/199 (9%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---EVAEALAYLHSSAYL 193
LV+EF L Q L D + +LT I + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQF 252
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 126 ---HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKY 180
Query: 253 TDKS-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 127
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 181
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 230
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 231 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 155
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 209
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 258
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 259 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 299
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 194
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 243
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 244 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFIN 117
KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 118 EVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRL 174
EVV+L +++ V++LL + +L+ E P LF ++ E +L E+
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 117
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST 233
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T
Sbjct: 118 SFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYT 171
Query: 234 KVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y PE+ R ++ +S V+S G++L +++ G P + E
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEE 219
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I F + R S E + ++ + CL +RPT +E+
Sbjct: 220 IIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 256
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
D F LG G G V+K G ++A K + + + + I E+ +L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V G + E + G+L Q L + + ++ +++ V + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE +
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQG 177
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRK 309
+ ++ +SD++S G+ LVE+ G+ PI A E L F +E
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE---LELMFGCQVE-------------- 220
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRN-RPTM 337
G+A E R L+SYG + RP M
Sbjct: 221 -GDAAETPPRPRTPGRPLSSYGMDSRPPM 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 182
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 231
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 232 -HDEEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPXDRPTFEEI 272
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 103
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 160
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 161 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 214
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 263
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 264 -HDEEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 304
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 71
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 128
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 182
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 231
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 232 -HDEEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 272
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
+E D + + ++G+G G VY G I + + +E +L+ F EV+ Q
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQ 85
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H NVV +G C+ ++ TL+ + D ++ L +IA E+ + +
Sbjct: 86 TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGM 143
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG---TSRSIAIDQTHVSTKVQ-GTFG 240
YLH+ I H+D+KS N+ D + I DFG S + + ++Q G
Sbjct: 144 GYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 241 YLDPEYFRSSQ---------FTDKSDVYSFGVVLVELLTGQKPISS 277
+L PE R F+ SDV++ G + EL + P +
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F R LG G G V ML G A+K K KVV ++E +NE I
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E+ P G +F +L + E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 154
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ K+ADFG ++ + + + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFIN 117
KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 118 EVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRL 174
EVV+L +++ V++LL + +L+ E P LF ++ E +L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST 233
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T
Sbjct: 119 SFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYT 172
Query: 234 KVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y PE+ R ++ +S V+S G++L +++ G P + E
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEE 220
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I F + R S E + ++ + CL +RPT +E+
Sbjct: 221 IIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 257
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVI--LSQINHRN 129
D + ++G+G G VYKG L D R +AVK V + + FINE I + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVK---VFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 130 VVKLLGCCLEVEVP-----LLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ + + V LLV E+ PNG+L +YL H + W R+A V
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTR 122
Query: 183 ALAYLHS-----SAYLP-IYHRDIKSTNILLDEKYRAKIADFGTSRSI-------AIDQT 229
LAYLH+ Y P I HRD+ S N+L+ I+DFG S + ++
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 230 HVSTKVQGTFGYLDPEYFRSS-------QFTDKSDVYSFGVVLVELL 269
+ + GT Y+ PE + + D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFIN 117
KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 118 EVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRL 174
EVV+L +++ V++LL + +L+ E P LF ++ E +L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST 233
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T
Sbjct: 119 SFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYT 172
Query: 234 KVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y PE+ R ++ +S V+S G++L +++ G P + E
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEE 220
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I F + R S E + ++ + CL +RPT +E+
Sbjct: 221 IIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 257
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 153
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 153
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 153
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
D F LG G G V+K G ++A K + + + + I E+ +L + N
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V G + E + G+L Q L + + ++ +++ V + L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE +
Sbjct: 185 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQG 239
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRK 309
+ ++ +SD++S G+ LVE+ G+ PI A E L F +E
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE---LELMFGCQVE-------------- 282
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRN-RPTM 337
G+A E R L+SYG + RP M
Sbjct: 283 -GDAAETPPRPRTPGRPLSSYGMDSRPPM 310
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 29/261 (11%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G G V+K G ++A K + + + + I E+ +L + N +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ E + G+L Q L + + ++ +++ V + L YL I H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSD 257
RD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE + + ++ +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 258 VYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIM 317
++S G+ LVE+ G+ PI A E + VE G+A E
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE------------------GDAAETP 227
Query: 318 AVSDVAKRCLNSYGRN-RPTM 337
R L+SYG + RP M
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPM 248
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 29/261 (11%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G G V+K G ++A K + + + + I E+ +L + N +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ E + G+L Q L + + ++ +++ V + L YL I H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 128
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSD 257
RD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE + + ++ +SD
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 258 VYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIM 317
++S G+ LVE+ G+ PI A E + VE G+A E
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE------------------GDAAETP 227
Query: 318 AVSDVAKRCLNSYGRN-RPTM 337
R L+SYG + RP M
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPM 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 70
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 127
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 181
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 230
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 231 -HDEEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 271
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
D F LG G G V+K G ++A K + + + + I E+ +L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V G + E + G+L Q L + + ++ +++ V + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE +
Sbjct: 123 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQG 177
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRK 309
+ ++ +SD++S G+ LVE+ G+ PI A E L F +E
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE---LELMFGCQVE-------------- 220
Query: 310 SGEAEEIMAVSDVAKRCLNSYGRN-RPTM 337
G+A E R L+SYG + RP M
Sbjct: 221 -GDAAETPPRPRTPGRPLSSYGMDSRPPM 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 65 KELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFIN 117
KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 118 EVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRL 174
EVV+L +++ V++LL + +L+ E P LF ++ E +L E+
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELAR 118
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST 233
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T
Sbjct: 119 SFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYT 172
Query: 234 KVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y PE+ R ++ +S V+S G++L +++ G P + E
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEE 220
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
I F + R S E + ++ + CL +RPT +E+
Sbjct: 221 IIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 257
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 77 NRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL- 134
+++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRY 80
Query: 135 -----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
G +V LV +++P H + +L ++ +LAY+HS
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 190 SAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY-F 247
I HRDIK N+LLD K+ DFG+++ + + +VS Y PE F
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 195
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQK 273
++ +T DV+S G VL ELL GQ
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 155
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 209
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 258
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 259 -HDEEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 299
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 52/297 (17%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 194
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF------------ 242
Query: 288 TYFVECIEENCLFDIIDDQV----RKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
E EE II QV R S E + ++ + CL +RPT +E+
Sbjct: 243 ----EHDEE-----IIGGQVFFRQRVSSECQHLI------RWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 195
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 46/284 (16%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLEEFIN---EVVILSQIN 126
+ + +LG+GG GTV+ G L D +A+K +++V+ S L + + EV +L ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 127 ----HRNVVKLLGCCLEVEVPLLVYE-FIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
H V++LL E +LV E +P LF Y+ E+ L +V
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLGEGPSRCFFGQVV 149
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
A+ + HS + HRDIK NIL+D + AK+ DFG+ A+ T GT
Sbjct: 150 AAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG---ALLHDEPYTDFDGTRV 203
Query: 241 YLDPEYFRSSQFTD-KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
Y PE+ Q+ + V+S G++L +++ G P E +F + +C
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER--DQEILEAELHFPAHVSPDCC 261
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAME 343
I +RCL +RP+++E+ ++
Sbjct: 262 ALI---------------------RRCLAPKPSSRPSLEEILLD 284
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 194
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 195
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 195
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EF 115
+ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 116 INEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEM 172
EVV+L +++ V++LL + +L+ E P LF ++ E +L E+
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEEL 138
Query: 173 RLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHV 231
+V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 192
Query: 232 STKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYF 290
T GT Y PE+ R ++ +S V+S G++L +++ G P +
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HD 240
Query: 291 VECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
E I F + R S E + ++ + CL +RPT +E+
Sbjct: 241 EEIIRGQVFF-----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 279
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 83
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 140
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 194
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLT 146
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 199
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 21/227 (9%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 84
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 141
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 195
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKP 274
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLE 113
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
+ EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 174
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 227
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 154
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRN 129
D F LG G G V+K G ++A K + + + + I E+ +L + N
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V G + E + G+L Q L + + ++ +++ V + L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE +
Sbjct: 150 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQG 204
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
+ ++ +SD++S G+ LVE+ G+ PI A E
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 113 EEFINEVVILSQIN-HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
E + EV IL +++ H N+++L LV++ + G LF YL E+++L+ +
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEK 111
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+I + E + LH L I HRD+K NILLD+ K+ DFG S +D
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 166
Query: 232 STKVQGTFGYLDPEYFRSSQ------FTDKSDVYSFGVVLVELLTGQKPI 275
+V GT YL PE S + + D++S GV++ LL G P
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 154
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 16/221 (7%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD-GRIIAVK---KSKVVDESKLEEFI 116
+F+ E D D+F + R +G+G G V D ++ A+K K K V+ +++
Sbjct: 5 VFDENE-DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 117 NEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI 176
E+ I+ + H +V L + E +V + + G L +L + + E
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFKEETVKLF 120
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ 236
E+ AL YL + I HRD+K NILLDE I DF + ++ +T ++T +
Sbjct: 121 ICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITT-MA 175
Query: 237 GTFGYLDPEYFRSSQ---FTDKSDVYSFGVVLVELLTGQKP 274
GT Y+ PE F S + ++ D +S GV ELL G++P
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++P G +F +L + E R A ++ Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 142
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPEI 195
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 154
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G G V+K G ++A K + + + + I E+ +L + N +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ E + G+L Q L + ++ +++ V + L YL I H
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKH--KIMH 147
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSD 257
RD+K +NIL++ + K+ DFG S + ID ++ GT Y+ PE + + ++ +SD
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 258 VYSFGVVLVELLTGQKPISS 277
++S G+ LVE+ G+ PI S
Sbjct: 205 IWSMGLSLVEMAVGRYPIGS 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 22/226 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 2 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 58
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 115
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 116 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 170
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E++P G +F +L + E R A ++
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 146
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 199
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 142 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 196
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 88 VYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVY 147
V G +II KK D KLE E I + H N+V+L E L++
Sbjct: 44 VLAGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIF 100
Query: 148 EFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNI 205
+ + G LF+ + + Y E + ++ EA+ + H + + HRD+K N+
Sbjct: 101 DLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQ---MGVVHRDLKPENL 152
Query: 206 LLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFG 262
LL K + K+ADFG + + +Q GT GYL PE R + D+++ G
Sbjct: 153 LLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 263 VVLVELLTGQKPI 275
V+L LL G P
Sbjct: 212 VILYILLVGYPPF 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 2 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 58
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 115
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 116 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 170
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 77 NRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
+++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVRLRY 81
Query: 136 CCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
EV L LV +++P H + +L ++ +LAY+HS
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 190 SAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY-F 247
I HRDIK N+LLD K+ DFG+++ + + +VS Y PE F
Sbjct: 142 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIF 196
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQK 273
++ +T DV+S G VL ELL GQ
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 78 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 132
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 191
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 204
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 78 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 132
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 133 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 191
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 192 VDIWSLGCIFAEMVT 206
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 192
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 85
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 146 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 200
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 96
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 157 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 211
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPE 226
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 72 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 185
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 186 VDIWSLGCIFAEMVT 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 113 EEFINEVVILSQIN-HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
E + EV IL +++ H N+++L LV++ + G LF YL E+++L+ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+I + E + LH L I HRD+K NILLD+ K+ DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 179
Query: 232 STKVQGTFGYLDPEYFRSSQ------FTDKSDVYSFGVVLVELLTGQKPI 275
+V GT YL PE S + + D++S GV++ LL G P
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 74 FNMNRILGQGG-QGTVYKGMLADGRIIAVK----KSKVVDESKLEEFINEVVILSQINHR 128
F LG G V A G++ AVK K+ ES +E NE+ +L +I H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIKHE 80
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAEALAY 186
N+V L LV + + G LF + + Y E + +R +V +A+ Y
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR-----QVLDAVYY 135
Query: 187 LHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
LH + I HRD+K N+L DE+ + I+DFG S+ + V + GT GY+
Sbjct: 136 LHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVA 190
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE ++ D +S GV+ LL G P
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 80 LGQGGQGTVYKG--MLADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN---HRNVVK 132
+G+G G V+K + GR +A+K+ +V +E I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 133 LLGCCL----EVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
L C + E L LV+E + + L YL D E + E + ++ L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
HS + HRD+K NIL+ + K+ADFG +R + S V T Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D++S G + E+ +KP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 84 GQGTVYKGMLA----DGRIIAVKKSKV--VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
G+G+ K +L DGR +K+ + + + EE EV +L+ + H N+V+
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF 92
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDP-----YEELSLTWEMRLRIATEVAEALAYLHSSAY 192
E +V ++ G LF+ ++ E+ L W ++ AL ++H
Sbjct: 93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVHDRK- 145
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQF 252
I HRDIKS NI L + ++ DFG +R + ++ GT YL PE + +
Sbjct: 146 --ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENKPY 202
Query: 253 TDKSDVYSFGVVLVELLT 270
+KSD+++ G VL EL T
Sbjct: 203 NNKSDIWALGCVLYELCT 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTA 184
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 79 ILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
ILG G G V+K A G +A K K EE NE+ +++Q++H N+++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+LV E++ G LF + D E +LT + ++ E + ++H + I H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILH 210
Query: 198 RDIKSTNILL--DEKYRAKIADFGTSRSIAIDQTHVSTKVQ-GTFGYLDPEYFRSSQFTD 254
D+K NIL + + KI DFG +R + KV GT +L PE +
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDFVSF 267
Query: 255 KSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRK-SGEA 313
+D++S GV+ LL+G P + N+ L C +D+ D++ + S EA
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPF--LGDNDAETLNNILA------CRWDLEDEEFQDISEEA 319
Query: 314 EEIMA 318
+E ++
Sbjct: 320 KEFIS 324
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD----GRIIAVK---KSKVVDESKLEEFINEVVILSQ 124
D F + LG G G V ML G A+K K KVV ++E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEA 183
+N +VKL + +V E+ P G +F +L + E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLT 154
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLD 243
YLHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 80 LGQGGQGTVYKG--MLADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN---HRNVVK 132
+G+G G V+K + GR +A+K+ +V +E I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 133 LLGCCL----EVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
L C + E L LV+E + + L YL D E + E + ++ L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
HS + HRD+K NIL+ + K+ADFG +R + S V T Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D++S G + E+ +KP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 75 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 129
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 188
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 189 VDIWSLGCIFAEMVT 203
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFINEVVILSQIN 126
+ + +LG GG G+VY G+ ++D +A+K K ++ D +L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 127 H--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
V++LL + +L+ E P LF ++ E +L E+ +V EA
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 243 DPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
PE+ R ++ +S V+S G++L +++ G P + E I F
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEEIIRGQVFF- 223
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ R S E + ++ + CL +RPT +E+
Sbjct: 224 ----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 252
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 113 EEFINEVVILSQIN-HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWE 171
E + EV IL +++ H N+++L LV++ + G LF YL E+++L+ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 172 MRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV 231
+I + E + LH L I HRD+K NILLD+ K+ DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 179
Query: 232 STKVQGTFGYLDPEYFRSSQ------FTDKSDVYSFGVVLVELLTGQKPI 275
V GT YL PE S + + D++S GV++ LL G P
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 74 FNMNRILGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE---EFINEVVILSQINHRN 129
F R+LG+GG G V + A G++ A KK + K + +NE IL ++N R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTL-FQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
VV L + LV + G L F H + + A E+ L LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
I +RD+K NILLD+ +I+D G + + QT + +V GT GY+ PE +
Sbjct: 304 RER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVK 358
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ ++T D ++ G +L E++ GQ P
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 22/225 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 192
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 22/226 (9%)
Query: 61 IFNSKELDKATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEE 114
+F + +D DY++ LG G V K G+ + I +++K E
Sbjct: 3 VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 115 FIN-EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR 173
I EV IL +I H NV+ L +L+ E + G LF +L E+ SLT E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLA---EKESLTEEEA 116
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDE----KYRAKIADFGTSRSIAIDQT 229
++ + YLHS L I H D+K NI+L + K R KI DFG + I D
Sbjct: 117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFG 171
Query: 230 HVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + GT ++ PE ++D++S GV+ LL+G P
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 80 LGQGGQGTVYKG--MLADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN---HRNVVK 132
+G+G G V+K + GR +A+K+ +V +E I EV +L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 133 LLGCCL----EVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
L C + E L LV+E + + L YL D E + E + ++ L +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
HS + HRD+K NIL+ + K+ADFG +R + S V T Y PE
Sbjct: 137 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVL 191
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D++S G + E+ +KP+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 90
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 151 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 205
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 143 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 197
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFINEVVILSQIN 126
+ + +LG GG G+VY G+ ++D +A+K K ++ D +L EVV+L +++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 127 H--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
V++LL + +L+ E P LF ++ E +L E+ +V EA
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 125
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T GT Y
Sbjct: 126 VRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 179
Query: 243 DPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
PE+ R ++ +S V+S G++L +++ G P + E I F
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEEIIRGQVFF- 226
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ R S E + ++ + CL +RPT +E+
Sbjct: 227 ----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 255
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 71 TDYFNMNRILGQGGQGTVY--KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQI 125
+D + R+LG+G G V K + G+ AVK K +V ++ E + EV +L Q+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEA 183
+H N+ KL + LV E G LF + + E+ RI +V
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSG 138
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFG 240
+ Y H + I HRD+K N+LL+ K + +I DFG S + K+ GT
Sbjct: 139 ITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-XKDKI-GTAY 193
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANE 282
Y+ PE + + +K DV+S GV+L LL+G P + ANE
Sbjct: 194 YIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNG--ANE 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 166 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 220
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 217 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 271
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 12/209 (5%)
Query: 74 FNMNRILGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE---EFINEVVILSQINHRN 129
F R+LG+GG G V + A G++ A KK + K + +NE IL ++N R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTL-FQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
VV L + LV + G L F H + + A E+ L LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
I +RD+K NILLD+ +I+D G + + QT + +V GT GY+ PE +
Sbjct: 304 RER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVK 358
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ ++T D ++ G +L E++ GQ P
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 128
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 172 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 226
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 72 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 75 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 129
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 130 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 187
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 188 AVDIWSLGCIFAEMVT 203
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 174 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 228
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 73 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 127
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 185
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 186 AVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 128
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 73 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 127
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 128 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 185
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 186 AVDIWSLGCIFAEMVT 201
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFINEVVILSQIN 126
+ + +LG GG G+VY G+ ++D +A+K K ++ D +L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 127 H--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
V++LL + +L+ E P LF ++ E +L E+ +V EA
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNXGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 243 DPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
PE+ R ++ +S V+S G++L +++ G P + E I F
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE------------HDEEIIRGQVFF- 223
Query: 302 IIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ R S E + ++ + CL +RPT +E+
Sbjct: 224 ----RQRVSXECQHLI------RWCLALRPSDRPTFEEI 252
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK 132
+ +++G G G VY+ L D G ++A+KK V+ + + + E+ I+ +++H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 133 LLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
L EV L LV +++P H + +L ++ +LAY
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 176 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPE 230
Query: 246 Y-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
+++G G G V++ L + +A+KK V+ + + + E+ I+ + H NVV L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK--VLQDKRFKN--RELQIMRIVKHPNVVDLKAFF 101
Query: 138 L-----EVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRL--RIATEVAEALAYLHS 189
+ EV L LV E++P H Y +L T M L ++ +LAY+HS
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRH--YAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 190 SAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY-F 247
I HRDIK N+LLD K+ DFG+++ + + +VS Y PE F
Sbjct: 160 IG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELIF 214
Query: 248 RSSQFTDKSDVYSFGVVLVELLTGQK 273
++ +T D++S G V+ EL+ GQ
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQP 240
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---EVAEALAYLHSSAYL 193
LV+EF L Q L + +LT I + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQF 252
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 ---HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKY 183
Query: 253 TDKS-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 182
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 183 AVDIWSLGCIFAEMVT 198
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 72 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 72 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 127 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 183
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 AVDIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 73 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 127
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 128 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 185
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 186 AVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 182
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 183 AVDIWSLGCIFAEMVT 198
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---EVAEALAYLHSSAYL 193
LV+EF L L D + +LT I + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQF 252
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 ---HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKY 183
Query: 253 TDKS-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRN 129
D F R LG G G V+ + V K+ D S+ +E+ E+ +L ++H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEE-LSLTWEMRLRIATEVAEALAYLH 188
++K+ + +V E G L + + +L+ + ++ ALAY H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 189 SSAYLPIYHRDIKSTNILLDE---KYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
S + H+D+K NIL + KI DFG + D+ ST GT Y+ PE
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE 196
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTT-----YFVEC 293
F+ T K D++S GVV+ LLTG P + E + T Y VEC
Sbjct: 197 VFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+ KL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 57 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 109
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHAR 165
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 166 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWT 218
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---EVAEALAYLHSSAYL 193
LV+EF L L D + +LT I + ++ + LA+ HS L
Sbjct: 73 IHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQF 252
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 128 ---HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKY 182
Query: 253 TDKS-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE---EFINEVVILSQIN 126
+ + +LG GG G+VY G+ ++D +A+K K ++ D +L EVV+L +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 127 H--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLTWEMRLRIATEVAEA 183
V++LL + +L+ E P LF ++ E +L E+ +V EA
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLEA 122
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYL 242
+ + H+ L HRDIK NIL+D + K+ DFG+ A+ + V T GT Y
Sbjct: 123 VRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYS 176
Query: 243 DPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFD 301
PE+ R ++ +S V+S G++L +++ G P E EE
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----------------EHDEE----- 215
Query: 302 IIDDQV----RKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
II QV R S E + ++ + CL +RPT +E+
Sbjct: 216 IIGGQVFFRQRVSSECQHLI------RWCLALRPSDRPTFEEI 252
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 25/240 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVY----KGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
K TD FN +LG+G G V KG + +KK V+ + +E + E +L+
Sbjct: 18 KLTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 125 INHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHD--PYEELSLTWEMRLRIATEVA 181
+ L C + L V E++ G L ++ ++E + A E+A
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEIA 131
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQGTFG 240
L +L S I +RD+K N++LD + KIADFG + D V+TK GT
Sbjct: 132 IGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTPD 186
Query: 241 YLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLF 300
Y+ PE + D ++FGV+L E+L GQ P EG + F +E N +
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIMEHNVAY 240
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 128
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 69 KATDYFNMNRILGQGGQGTV----YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
KA DY + +++G+G G V +K + + K +++ S F E I++
Sbjct: 72 KAEDY-EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
N VV+L + +V E++P G L + + ++ W R A EV AL
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWA-RFYTA-EVVLAL 186
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+HS ++ HRD+K N+LLD+ K+ADFGT + + GT Y+ P
Sbjct: 187 DAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 245 EYFRSS----QFTDKSDVYSFGVVLVELLTGQKPI 275
E +S + + D +S GV L E+L G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+ KL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 72 IHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 126
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 127 HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 184
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 185 AVDIWSLGCIFAEMVT 200
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 69 KATDYFNMNRILGQGGQGTV----YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
KA DY + +++G+G G V +K + + K +++ S F E I++
Sbjct: 67 KAEDY-EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
N VV+L + +V E++P G L + + ++ W R A EV AL
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKW-ARFYTA-EVVLAL 181
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+HS ++ HRD+K N+LLD+ K+ADFGT + + GT Y+ P
Sbjct: 182 DAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 245 EYFRSS----QFTDKSDVYSFGVVLVELLTGQKPI 275
E +S + + D +S GV L E+L G P
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+ KL + +V E+ P G +F +L + E R A ++ Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 157
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+++D++ K+ DFG ++ + + + GT YL PE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 210
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKV-VDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG G G V+K G ++A K + + + + I E+ +L + N +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 138 LEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYH 197
+ E + G+L Q L + + ++ +++ V + L YL I H
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMH 131
Query: 198 RDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSD 257
RD+K +NIL++ + K+ DFG S + ID+ ++ + GT Y+ PE + + ++ +SD
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 258 VYSFGVVLVELLTGQKP 274
++S G+ LVE+ G+ P
Sbjct: 189 IWSMGLSLVEMAVGRYP 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + L++ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 69 KATDYFNMNRILGQGGQGTV----YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
KA DY + +++G+G G V +K + + K +++ S F E I++
Sbjct: 72 KAEDY-EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
N VV+L + +V E++P G L + + ++ W R A EV AL
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWA-RFYTA-EVVLAL 186
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
+HS ++ HRD+K N+LLD+ K+ADFGT + + GT Y+ P
Sbjct: 187 DAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 245 EYFRSS----QFTDKSDVYSFGVVLVELLTGQKPI 275
E +S + + D +S GV L E+L G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 23 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 75
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 131
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+DE+ ++ DFG ++ + +
Sbjct: 132 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWX 184
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 185 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 73 YFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVV--DESKLEEFINEVVILSQINHRNV 130
Y + +I G+G G VYK G A+KK ++ DE I E+ IL ++ H N+
Sbjct: 4 YHGLEKI-GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL + +LV F++L ++L E L T + L L+
Sbjct: 63 VKLYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 191 AYLP---IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
AY + HRD+K N+L++ + KIADFG +R+ I + +V T Y P+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVL 172
Query: 248 R-SSQFTDKSDVYSFGVVLVELLTG 271
S +++ D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 31/243 (12%)
Query: 69 KATDYFNMNRILGQGGQGTVYKGMLADGR-------IIAVKKSKVVDESKLEEFINEVVI 121
K TD FN +LG+G G V ML++ + + +KK V+ + +E + E +
Sbjct: 339 KLTD-FNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 122 LSQINHRNVVKLLGCCLEVEVPL-LVYEFIPNGTLFQYLHD--PYEELSLTWEMRLRIAT 178
L+ + L C + L V E++ G L ++ ++E + A
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAA 449
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK-VQG 237
E+A L +L S I +RD+K N++LD + KIADFG + D V+TK G
Sbjct: 450 EIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCG 504
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEEN 297
T Y+ PE + D ++FGV+L E+L GQ P EG + F +E N
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIMEHN 558
Query: 298 CLF 300
+
Sbjct: 559 VAY 561
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 57 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 109
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHAR 165
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 166 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 218
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 219 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 73 YFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVV--DESKLEEFINEVVILSQINHRNV 130
Y + +I G+G G VYK G A+KK ++ DE I E+ IL ++ H N+
Sbjct: 4 YHGLEKI-GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL + +LV F++L ++L E L T + L L+
Sbjct: 63 VKLYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 191 AYLP---IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
AY + HRD+K N+L++ + KIADFG +R+ I + +V T Y P+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVL 172
Query: 248 R-SSQFTDKSDVYSFGVVLVELLTG 271
S +++ D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKS-KVVDESKLEE-----FINEVVILSQINH 127
+N+ +LG+G G V K RI + + KV++++ + + EV +L +++H
Sbjct: 24 YNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
N++KL + +V E G LF + + + RI +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYM 137
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
H I HRD+K NILL+ K + KI DFG S T + ++ GT Y+ P
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAP 192
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
E R + + +K DV+S GV+L LL+G P
Sbjct: 193 EVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKS-KVVDESKLEE-----FINEVVILSQINH 127
+N+ +LG+G G V K RI + + KV++++ + + EV +L +++H
Sbjct: 24 YNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
N++KL + +V E G LF + + + RI +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYM 137
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
H I HRD+K NILL+ K + KI DFG S T + ++ GT Y+ P
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAP 192
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
E R + + +K DV+S GV+L LL+G P
Sbjct: 193 EVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 71 TDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQ 124
T+ + + LG+G V + G II KK D KLE E I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAE 182
+ H N+V+L E L+++ + G LF+ + + Y E + ++ E
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILE 121
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVSTKVQGTF 239
A+ + H + + HR++K N+LL K + K+ADFG + + +Q GT
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTP 177
Query: 240 GYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
GYL PE R + D+++ GV+L LL G P
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 73 YFNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVV--DESKLEEFINEVVILSQINHRNV 130
Y + +I G+G G VYK G A+KK ++ DE I E+ IL ++ H N+
Sbjct: 4 YHGLEKI-GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
VKL + +LV F++L ++L E L T + L L+
Sbjct: 63 VKLYDVIHTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 191 AYLP---IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
AY + HRD+K N+L++ + KIADFG +R+ I + ++ T Y P+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVL 172
Query: 248 R-SSQFTDKSDVYSFGVVLVELLTG 271
S +++ D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFAEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 31 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 83
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHAR 139
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 140 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 192
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 193 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 37 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 89
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 145
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 198
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 73 YFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRN 129
Y +++ LG+G TVYKG L D ++A+K+ ++ E I EV +L + H N
Sbjct: 4 YIKLDK-LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+V L + LV+E++ + L QYL D +++ ++L + ++ LAY H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLF-QLLRGLAYCHR 118
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR- 248
L HRD+K N+L++E+ K+ADFG +R+ +I +V T Y P+
Sbjct: 119 QKVL---HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLG 174
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQ 272
S+ ++ + D++ G + E+ TG+
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKS-KVVDESKLEE-----FINEVVILSQINH 127
+N+ +LG+G G V K RI + + KV++++ + + EV +L +++H
Sbjct: 24 YNIVCMLGKGSFGEVLK---CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
N++KL + +V E G LF + + + RI +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI---IKRKRFSEHDAARIIKQVFSGITYM 137
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
H I HRD+K NILL+ K + KI DFG S T + ++ GT Y+ P
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAP 192
Query: 245 EYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
E R + + +K DV+S GV+L LL+G P
Sbjct: 193 EVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+ K ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 71 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 125
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 126 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 184
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+ K ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+EF+ + L +++ D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 77 NRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFIN-EVVILSQINHRNVVKLL 134
+++G G G VY+ L D G ++A+KK V + K F N E+ I+ +++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIVRLR 79
Query: 135 GCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
EV L LV +++P H + +L ++ +LAY+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY- 246
S I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELI 194
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 79 ILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVVKLLGC- 136
+ +G G V+K L + +AVK + D+ + E+ EV L + H N+++ +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 137 --CLEVEVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH----- 188
V+V L L+ F G+L +L + ++W IA +A LAYLH
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 189 -SSAYLP-IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ-GTFGYLDPE 245
+ P I HRDIKS N+LL A IADFG + ++ T Q GT Y+ PE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 246 Y------FRSSQFTDKSDVYSFGVVLVELLT 270
F+ F + D+Y+ G+VL EL +
Sbjct: 204 VLEGAINFQRDAFL-RIDMYAMGLVLWELAS 233
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 97 RIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLF 156
R I + + V S + + EV +L ++H N++KL + LV E G LF
Sbjct: 65 RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
Query: 157 -QYLHD-PYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYR-- 212
+ +H + E+ I +V + YLH I HRD+K N+LL+ K +
Sbjct: 125 DEIIHRMKFNEVDAAV-----IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDA 176
Query: 213 -AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
KI DFG S ++ +Q + ++ GT Y+ PE R ++ +K DV+S GV+L LL G
Sbjct: 177 LIKIVDFGLS-AVFENQKKMKERL-GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
Query: 272 QKPI 275
P
Sbjct: 234 YPPF 237
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 80 LGQGGQGTVYKGMLADGR-IIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G GTV+K + I+A+K+ ++ D+ + + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+ LV+EF + L +Y +L E+ ++ + L + HS L
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP--EIVKSFLFQLLKGLGFCHSRNVL--- 123
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE-YFRSSQFTDK 255
HRD+K N+L++ K+ADFG +R+ I S +V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 256 SDVYSFGVVLVELLTGQKPI 275
D++S G + EL +P+
Sbjct: 183 IDMWSAGCIFAELANAARPL 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 40/225 (17%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKK--SKVVDESKLEEFINEVVILSQIN-HRNVVKLLG 135
LG+G G V+K + G ++AVKK + + + E++IL++++ H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 136 CCLEVEVPLLVYEFIPNGTLFQY----LHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
L + VY +F Y LH L + + ++ + + YLHS
Sbjct: 77 V-LRADNDRDVY------LVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIA--------------------IDQTHV 231
L HRD+K +NILL+ + K+ADFG SRS D +
Sbjct: 130 LL---HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 232 STKVQGTFGYLDPEYFR-SSQFTDKSDVYSFGVVLVELLTGQKPI 275
T T Y PE S+++T D++S G +L E+L G KPI
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 72 DYFNMNRILGQGGQGTVY-KGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINH 127
D F + LG G G V + G A+K K KVV ++E +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAY 186
+VKL + +V E++ G +F +L + E R A ++ Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
LHS L + +RD+K N+L+D++ ++ DFG ++ + + + GT YL PE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 209
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
S + D ++ GV++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 74 FNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFIN-EVVILSQINHRNVV 131
+ +++G G G VY+ L D G ++A+KK V + K F N E+ I+ +++H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIV 76
Query: 132 KLLGCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
+L EV L LV +++P H + +L ++ +LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
Y+HS I HRDIK N+LLD K+ DFG+++ + + +VS Y P
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAP 191
Query: 245 EY-FRSSQFTDKSDVYSFGVVLVELLTGQK 273
E F ++ +T DV+S G VL ELL GQ
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 77 NRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFIN-EVVILSQINHRNVVKLL 134
+++G G G VY+ L D G ++A+KK V + K F N E+ I+ +++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGK--AFKNRELQIMRKLDHCNIVRLR 79
Query: 135 GCCLEV-----EVPL-LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
EV L LV +++P H + +L ++ +LAY+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY- 246
S I HRDIK N+LLD K+ DFG+++ + + +VS Y PE
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELI 194
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQK 273
F ++ +T DV+S G VL ELL GQ
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+E + + D + + ++ + LA+ HS L
Sbjct: 70 IHTENKLYLVFEHVHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 124
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K N+L++ + K+ADFG +R+ + + +V T Y PE ++ +
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTA 183
Query: 257 -DVYSFGVVLVELLT 270
D++S G + E++T
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 68 DKATDYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D D+++++ LG G G V++ A G A K ES E E+ +S +
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
H +V L + +++YEF+ G LF+ + D + ++S + + +V + L +
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE--DEAVEYMRQVCKGLCH 270
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKY--RAKIADFGTSRSIAIDQTHVSTKV-QGTFGYLD 243
+H + Y+ H D+K NI+ K K+ DFG + + Q S KV GT +
Sbjct: 271 MHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAA 324
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE +D++S GV+ LL+G P
Sbjct: 325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 12/196 (6%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
+G+G G VYK G ++A+KK ++ E++ I E+ +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
LV+E + + L +++ D + + ++ + LA+ HS L
Sbjct: 74 IHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL--- 128
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAID-QTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+L++ + K+ADFG +R+ + +T+ V T Y PE ++
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYST 186
Query: 256 S-DVYSFGVVLVELLT 270
+ D++S G + E++T
Sbjct: 187 AVDIWSLGCIFAEMVT 202
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 72 DYFNMNRILGQG-----------GQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVV 120
D++ M LG G G G Y R ++ + V EE EV
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV----SREEIEREVN 60
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
IL +I H N++ L +L+ E + G LF +L E+ SLT + + ++
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQI 117
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTKVQ 236
+ + YLHS I H D+K NI+L +K R K+ DFG + I + + +
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIF 172
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 72 DYFNMNRILGQG-----------GQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVV 120
D++ M LG G G G Y R ++ + V EE EV
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV----SREEIEREVN 67
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
IL +I H N++ L +L+ E + G LF +L E+ SLT + + ++
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQI 124
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTKVQ 236
+ + YLHS I H D+K NI+L +K R K+ DFG + I + + +
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ ++ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSK-VVDESKLEEFINEV-VILSQINHRNVVKLLGC 136
+G+G G+V K + G+I+AVK+ + VDE + ++ + ++ V++ + +V+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 137 CLEVEVPLLVYEFIPNG--TLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
+ E + ++Y++ +++ + E+ +I +AL +L + L
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKITLATVKALNHLKEN--LK 146
Query: 195 IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ--- 251
I HRDIK +NILLD K+ DFG S + + T+ G Y+ PE S
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 252 -FTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKS 310
+ +SDV+S G+ L EL TG+ P W + LT + ++ + Q+ S
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPK-WNSVFDQLT----QVVKGD------PPQLSNS 253
Query: 311 GEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
E E + + CL RP KE+
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN 126
AT + +G G GTVYK G +A+K +V +E + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 127 ---HRNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
H NVV+L+ C E++V LV+E + + L YL D L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSR----SIAIDQTHVST 233
+ L +LH++ I HRD+K NIL+ K+ADFG +R +A+D V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-- 173
Query: 234 KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE S + D++S G + E+ +KP+
Sbjct: 174 ----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+++D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 68 DKATDYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQIN 126
D D+++++ LG G G V++ A G A K ES E E+ +S +
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 106
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAY 186
H +V L + +++YEF+ G LF+ + D + ++S + + +V + L +
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE--DEAVEYMRQVCKGLCH 164
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKY--RAKIADFGTSRSIAIDQTHVSTKV-QGTFGYLD 243
+H + Y+ H D+K NI+ K K+ DFG + + Q S KV GT +
Sbjct: 165 MHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAA 218
Query: 244 PEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE +D++S GV+ LL+G P
Sbjct: 219 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 72 DYFNMNRILGQG-----------GQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVV 120
D++ M LG G G G Y R + + V EE EV
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGV----SREEIEREVN 81
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
IL +I H N++ L +L+ E + G LF +L E+ SLT + + ++
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQI 138
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTKVQ 236
+ + YLHS I H D+K NI+L +K R K+ DFG + I + + +
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIF 193
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 73 YFNMNRILGQGGQGTVYKG-MLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHR 128
++ + LG G G V G G +AVK + K+ + + E+ L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAY 186
+++KL +V E++ G LF Y+ H EE+ E R R+ ++ A+ Y
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDY 126
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
H + HRD+K N+LLD AKIADFG S ++ D + T G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GSPNYAAPEV 181
Query: 247 FRSSQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + D++S GV+L LL G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN 126
AT + +G G GTVYK G +A+K +V +E + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 127 ---HRNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
H NVV+L+ C E++V LV+E + + L YL D L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+ L +LH++ I HRD+K NIL+ K+ADFG +R + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-- 173
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE S + D++S G + E+ +KP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 123
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + D + T GT YL PE
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLED 179
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVV--DESKLEEFINEVVILSQIN 126
AT + +G G GTVYK G +A+K +V +E + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 127 ---HRNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
H NVV+L+ C E++V LV+E + + L YL D L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKV-TLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
+ L +LH++ I HRD+K NIL+ K+ADFG +R + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 238 TFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE S + D++S G + E+ +KP+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 126
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + D + T GT YL PE
Sbjct: 127 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLED 182
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT YL P S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 70 ATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEF-----INEVVILS 123
AT + +G G GTVYK G +A+K +V + + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 124 QIN---HRNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRL 174
++ H NVV+L+ C E++V LV+E + + L YL D L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKV-TLVFEHV-DQDLRTYL-DKAPPPGLPAETIK 123
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
+ + L +LH++ I HRD+K NIL+ K+ADFG +R + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
V T Y PE S + D++S G + E+ +KP+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 123
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + D + T GT YL PE
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLED 179
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 80 LGQGGQGTVYKGMLADGR-IIAVKKSKVVD--ESKLEEFINEVVILSQINHRNVVKLLGC 136
+G+G GTV+K + I+A+K+ ++ D E + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIY 196
+ LV+EF + L +Y +L E+ ++ + L + HS L
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP--EIVKSFLFQLLKGLGFCHSRNVL--- 123
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE-YFRSSQFTDK 255
HRD+K N+L++ K+A+FG +R+ I S +V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 256 SDVYSFGVVLVELLTGQKPI 275
D++S G + EL +P+
Sbjct: 183 IDMWSAGCIFAELANAGRPL 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVV---ILSQINH 127
D+F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQY-LHDPYEELSLTWEMRLRIAT-EVAEALA 185
R +V L E + L + I NG +Y +++ E+ E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K N+LLD+ +I+D G + + QT + GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
++ D ++ GV L E++ + P +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 79 ILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFIN-----EVVILSQINHRNVVK 132
LG+G TVYK + +I+A+KK K+ S+ ++ IN E+ +L +++H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 133 LLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
LL LV++F+ L + D L LT + L YLH
Sbjct: 77 LLDAFGHKSNISLVFDFM-ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE-YFRSSQ 251
I HRD+K N+LLDE K+ADFG ++S +V T Y PE F +
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARM 189
Query: 252 FTDKSDVYSFGVVLVELL 269
+ D+++ G +L ELL
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVV---ILSQINH 127
D+F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQY-LHDPYEELSLTWEMRLRIAT-EVAEALA 185
R +V L E + L + I NG +Y +++ E+ E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K N+LLD+ +I+D G + + QT + GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
++ D ++ GV L E++ + P +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVV---ILSQINH 127
D+F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQY-LHDPYEELSLTWEMRLRIAT-EVAEALA 185
R +V L E + L + I NG +Y +++ E+ E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K N+LLD+ +I+D G + + QT + GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
++ D ++ GV L E++ + P +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 72 DYFNMNRILGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVV---ILSQINH 127
D+F R+LG+GG G V+ M A G++ A KK K + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQY-LHDPYEELSLTWEMRLRIAT-EVAEALA 185
R +V L E + L + I NG +Y +++ E+ E R T ++ L
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH I +RD+K N+LLD+ +I+D G + + QT + GT G++ PE
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPE 359
Query: 246 YFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
++ D ++ GV L E++ + P +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 128
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + I GT YL PE
Sbjct: 129 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 184
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 123
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + I GT YL PE
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 112 LEEFINEVVILSQINHRNVVKLLGCCLEVEVPLL--VYEFIPNGTLFQYLHDPYEELSLT 169
+E+ E+ IL +++H NVVKL+ + L V+E + G + + L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-----PTLKPL 134
Query: 170 WEMRLRIA-TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
E + R ++ + + YLH Y I HRDIK +N+L+ E KIADFG S
Sbjct: 135 SEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ--FTDKS-DVYSFGVVLVELLTGQKP 274
+S V GT ++ PE ++ F+ K+ DV++ GV L + GQ P
Sbjct: 192 ALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVD-ESKLEEFINEVVILSQINHRNVV 131
F + LG+GG G V++ D A+K+ ++ + E E+ + EV L+++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW-------EMR-----LRIATE 179
+ LE + P L+ + +E W E R L I +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS------- 232
+AEA+ +LHS + HRD+K +NI K+ DFG ++ D+ +
Sbjct: 127 IAEAVEFLHSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 233 ----TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 123
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + I GT YL PE
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F+ ++LG+G G V A GR A+K K ++ + ++ + E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E T E E+ AL YLHS
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHS 123
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RDIK N++LD+ KI DFG + I GT YL PE
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 80 LGQGGQGTVYKGML-ADGRIIAVKKSKVV--DESKLEEFINEVVILSQINHRNVVKLLGC 136
+G G G V+K G +IAVK+ + E ++ V+L + +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 137 CLEVEVPLLVYEFIPNGT----LFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAY 192
+ + E + GT L + + P E L ++ + +AL YL
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKEKHG 145
Query: 193 LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQF 252
+ HRD+K +NILLDE+ + K+ DFG S + D+ + G Y+ PE
Sbjct: 146 --VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDP 201
Query: 253 TD-----KSDVYSFGVVLVELLTGQKP 274
T ++DV+S G+ LVEL TGQ P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 63 NSKELDKATDYFNMNRILGQGGQGTVYKGMLA----DGRIIAVK---KSKVVDESKLEEF 115
N+ +LD+ F+ + LG G G V ML G A+K K KVV ++E
Sbjct: 36 NTAQLDQ----FDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 116 INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR 175
+NE IL +N +VKL + +V E++ G +F +L + E R
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHAR 144
Query: 176 I-ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
A ++ YLHS L + +RD+K N+L+D++ ++ DFG ++ + +
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWX 197
Query: 235 VQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ GT L PE S + D ++ GV++ E+ G P
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 80 LGQGGQGTVYKGMLAD-GRIIAVKKS-KVVDESKLEEF-INEVVILSQINHRNVVKLLGC 136
+G+G G V+K D G+I+A+KK + D+ +++ + E+ +L Q+ H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 137 CLEVEVPLLVYEFIPNGTLFQ---YLHDPYEEL--SLTWEMRLRIATEVAEALAYLHSSA 191
LV+E+ + L + Y E L S+TW+ +A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKHN 122
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR-SS 250
+ HRD+K NIL+ + K+ DFG +R + + +V T Y PE +
Sbjct: 123 CI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDT 178
Query: 251 QFTDKSDVYSFGVVLVELLTG 271
Q+ DV++ G V ELL+G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 73 YFNMNRILGQGGQGTVYKG-MLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHR 128
++ + LG G G V G G +AVK + K+ + + E+ L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDPYEELSLTWEMRLRIATEVAEALAY 186
+++KL +V E++ G LF Y+ H EE+ E R R+ ++ A+ Y
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDY 126
Query: 187 LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
H + HRD+K N+LLD AKIADFG S ++ D + G+ Y PE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSC-GSPNYAAPEV 181
Query: 247 FRSSQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + D++S GV+L LL G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 28/230 (12%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKLEEFINEVV 120
N D + Y ++ + LG GG G V+ + D + +A+KK + D ++ + E+
Sbjct: 2 MNIHGFDLGSRYMDL-KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIK 60
Query: 121 ILSQINHRNVVKL--------------LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEEL 166
I+ +++H N+VK+ +G E+ +V E++ L + E+
Sbjct: 61 IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQG 115
Query: 167 SLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIA 225
L E ++ L Y+HS+ L HRD+K N+ ++ E KI DFG +R +
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHSANVL---HRDLKPANLFINTEDLVLKIGDFGLARIMD 172
Query: 226 IDQTHVSTKVQG--TFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
+H +G T Y P S + +T D+++ G + E+LTG+
Sbjct: 173 PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 79 ILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLL---- 134
I +G G V+K L + +AVK + D+ + E+ + H N+++ +
Sbjct: 22 IKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAAEK 79
Query: 135 -GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH----- 188
G LEVE+ L+ F G+L YL +TW +A ++ L+YLH
Sbjct: 80 RGSNLEVEL-WLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 189 --SSAYLP-IYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ-GTFGYLDP 244
+ P I HRD KS N+LL A +ADFG + + T Q GT Y+ P
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 245 EY------FRSSQFTDKSDVYSFGVVLVELLT 270
E F+ F + D+Y+ G+VL EL++
Sbjct: 195 EVLEGAINFQRDAFL-RIDMYAMGLVLWELVS 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 31/309 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLEEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H NV+ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEG-RNLTTYFVECIE 295
GT ++ PE ++D++S GV+ LL+G P E N+T+ + E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 296 E--NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
E + ++ D +RK + V + KR P + V + +R S
Sbjct: 240 EFFSHTSELAKDFIRK-------LLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292
Query: 354 DENNIQKCY 362
+ N +K Y
Sbjct: 293 NLENFRKQY 301
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 31/309 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLEEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H NV+ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEG-RNLTTYFVECIE 295
GT ++ PE ++D++S GV+ LL+G P E N+T+ + E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 296 E--NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
E + ++ D +RK + V + KR P + V + +R S
Sbjct: 240 EFFSHTSELAKDFIRK-------LLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292
Query: 354 DENNIQKCY 362
+ N +K Y
Sbjct: 293 NLENFRKQY 301
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V RII+ +K + + + +N E+ IL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 244
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 245 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 299
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V RII+ +K + + + +N E+ IL
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 258
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 259 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 313
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLEEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H NV+ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEG-RNLTTYFVECIE 295
GT ++ PE ++D++S GV+ LL+G P E N+T + E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 296 E--NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
E + ++ D +RK + V + KR P + V + +R S
Sbjct: 240 EFFSQTSELAKDFIRK-------LLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292
Query: 354 DENNIQKCY 362
+ N +K Y
Sbjct: 293 NLENFRKQY 301
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLEEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H NV+ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--KLEEFINEVVILSQINHRNVVKLLGCC 137
L + G ++KG G I VK KV D S K +F E L +H NV+ +LG C
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 138 LEVEV--PLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
P L+ ++P G+L+ LH+ + ++ A ++A +A+LH+ L I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFLHTLEPL-I 134
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF-RSSQFTD 254
+ S ++++DE A+I+ S S ++ PE + + T+
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYAPAWVAPEALQKKPEDTN 188
Query: 255 K--SDVYSFGVVLVELLTGQKPISSI 278
+ +D++SF V+L EL+T + P + +
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADL 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK--KSKVVDESKLEEFI-NEVVILSQINHRN 129
+ + + LG+G G V G+ +A+K KV+ +S ++ I E+ L + H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
++KL + ++V E+ N LF Y+ + ++ + R ++ A+ Y H
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K N+LLDE KIADFG S +I D + T G+ Y PE
Sbjct: 132 HK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISG 186
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + DV+S GV+L +L + P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 74 FNMNRILGQGGQGTVYKGM-LADGRIIAVK--KSKVVDESKLEEFI-NEVVILSQINHRN 129
+ + + LG+G G V G+ +A+K KV+ +S ++ I E+ L + H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
++KL + ++V E+ N LF Y+ + ++ + R ++ A+ Y H
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K N+LLDE KIADFG S +I D + T G+ Y PE
Sbjct: 131 HK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISG 185
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + DV+S GV+L +L + P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDES-KLEEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H NV+ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEG-RNLTTYFVECIE 295
GT ++ PE ++D++S GV+ LL+G P E N+T + E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 296 E--NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
E + ++ D +RK + V + KR P + V + +R S
Sbjct: 240 EFFSQTSELAKDFIRK-------LLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292
Query: 354 DENNIQKCY 362
+ N +K Y
Sbjct: 293 NLENFRKQY 301
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 78 RILGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
R LG+GG Y+ D + + V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G + + +V E +L + LH ++T + + + YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
+ HRD+K N+ L++ KI DFG + I D T + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHS 220
Query: 254 DKSDVYSFGVVLVELLTGQKPISS 277
+ D++S G +L LL G+ P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 138
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D T + GT Y+ PE + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 197
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 138
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D T + GT Y+ PE + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 197
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET 219
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 74 FNMNRILGQGGQGTV---YKGMLADGRIIAVKKSKVVDESKLEEFI-NEVVILSQINHRN 129
+ + + LG+G G V Y + + KV+ +S ++ I E+ L + H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
++KL + ++V E+ N LF Y+ + ++ + R ++ A+ Y H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K N+LLDE KIADFG S +I D + T G+ Y PE
Sbjct: 126 HK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISG 180
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + DV+S GV+L +L + P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIA 177
E+ L + H +++KL ++V E+ G LF Y+ E+ +T + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI---VEKKRMTEDEGRRFF 114
Query: 178 TEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG 237
++ A+ Y H I HRD+K N+LLD+ KIADFG S +I D + T G
Sbjct: 115 QQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSC-G 169
Query: 238 TFGYLDPEYFRSSQFT-DKSDVYSFGVVLVELLTGQKP 274
+ Y PE + + DV+S G+VL +L G+ P
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 142
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D T + GT Y+ PE + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 201
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFET 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 74 FNMNRILGQGGQGTV---YKGMLADGRIIAVKKSKVVDESKLEEFI-NEVVILSQINHRN 129
+ + + LG+G G V Y + + KV+ +S ++ I E+ L + H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
++KL + ++V E+ N LF Y+ + ++ + R ++ A+ Y H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---VQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
I HRD+K N+LLDE KIADFG S +I D + T G+ Y PE
Sbjct: 122 HK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVISG 176
Query: 250 SQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + DV+S GV+L +L + P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 80 LGQGGQGTV--YKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCC 137
LG+GG V +G L DG A+K+ ++ EE E + NH N+++L+ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 138 LE----VEVPLLVYEFIPNGTLFQYLHDPYEELS-----LTWEMRLRIATEVAEALAYLH 188
L L+ F GTL+ + E L LT + L + + L +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEI----ERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG----------- 237
+ Y HRD+K TNILL ++ + + D G+ I HV Q
Sbjct: 152 AKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACI---HVEGSRQALTLQDWAAQRC 205
Query: 238 TFGYLDPEYFRSSQ---FTDKSDVYSFGVVLVELLTGQKP 274
T Y PE F +++DV+S G VL ++ G+ P
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 78 RILGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
R LG+GG Y+ D + + V KS ++ + E+ E+ I +++ +VV
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G + + +V E +L + LH ++T + + + YLH++
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARYFMRQTIQGVQYLHNNR-- 146
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
+ HRD+K N+ L++ KI DFG + I D + GT Y+ PE +
Sbjct: 147 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHS 204
Query: 254 DKSDVYSFGVVLVELLTGQKPISSIWANE 282
+ D++S G +L LL G+ P + E
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 127 HRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAEAL 184
H N+VKL + LV E + G LF+ + + E ++ MR ++ A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAV 119
Query: 185 AYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+++H + HRD+K N+L ++ KI DFG +R D + T T Y
Sbjct: 120 SHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHY 175
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
PE + + + D++S GV+L +L+GQ P S
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V +II+ +K + + + +N E+ IL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 118
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 119 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 173
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V +II+ +K + + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 119
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 65 KELDKATDYFNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVV 120
KE+ D F + +++G+G V M G++ A+K K ++ ++ F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
+L + R + +L + LV E+ G L L E + EM E+
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA--EMARFYLAEI 171
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
A+ +H Y+ HRDIK NILLD ++ADFG+ + D T S GT
Sbjct: 172 VMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 241 YLDPEYFRS-------SQFTDKSDVYSFGVVLVELLTGQKPI 275
YL PE ++ + + D ++ GV E+ GQ P
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 78 RILGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
R LG+GG Y+ D + + V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G + + +V E +L + LH ++T + + + YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
+ HRD+K N+ L++ KI DFG + I D + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLCKKGHS 220
Query: 254 DKSDVYSFGVVLVELLTGQKPISS 277
+ D++S G +L LL G+ P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V +II+ +K + + + +N E+ IL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 125
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 126 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 180
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V +II+ +K + + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 119
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLADG------RIIAVKKSKVVDESKLEEFIN---EVVIL 122
D + M++ LG G G V +II+ +K + + + +N E+ IL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIAT---- 178
++NH ++K+ + E +V E + G LF + RL+ AT
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFD---------KVVGNKRLKEATCKLY 119
Query: 179 --EVAEALAYLHSSAYLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVST 233
++ A+ YLH + I HRD+K N+LL +E KI DFG S+ + +T +
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 234 KVQGTFGYLDPEYFRS---SQFTDKSDVYSFGVVLVELLTGQKPIS 276
+ GT YL PE S + + D +S GV+L L+G P S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 78 RILGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKL 133
R LG+GG Y+ D + + V KS ++ + E+ E+ I +++ +VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
G + + +V E +L + LH ++T + + + YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHK--RRKAVTEPEARYFMRQTIQGVQYLHNNR-- 162
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFT 253
+ HRD+K N+ L++ KI DFG + I D + GT Y+ PE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGHS 220
Query: 254 DKSDVYSFGVVLVELLTGQKPISS 277
+ D++S G +L LL G+ P +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFET 244
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEF----INEVVIL 122
D+ + Y + +I GQG G V+K G+ +A+KK V+ E++ E F + E+ IL
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKIL 71
Query: 123 SQINHRNVVKLLGCCLEVEVPL--------LVYEFIPNGTLFQYLHDPYEELSLTWEMRL 174
+ H NVV L+ C P LV++F + L L + + +L+ E++
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK- 128
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
R+ + L Y+H + I HRD+K+ N+L+ K+ADFG +R+ ++ + +
Sbjct: 129 RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 235 VQG---TFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE + + D++ G ++ E+ T + PI
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID 227
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R I D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 228 QTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+V + ++ PE +T +SDV+SFGV+L E+ + G P + +E
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 310
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYL 159
++E+ IL I H NVV LLG C + PL+V EF G L YL
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 76 MNRILGQGGQGTVYKGMLAD----GRIIAVKKS-KVVDESKL---EEFINEVVILSQINH 127
N LGQG ++KG+ + G++ + KV+D++ E F ++S+++H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+++V G C+ + +LV EF+ G+L YL +++ W +L +A ++A A+ +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV------QGTFGY 241
+ + H ++ + NILL R + G I + +S V Q +
Sbjct: 130 EENTLI---HGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 242 LDPEYFRSSQFTD-KSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCL 299
+ PE + + + +D +SFG L E+ + G KP+S++ + R L Y
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL--DSQRKLQFY---------- 231
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ R A + ++++ C++ +RP+ + + +L +
Sbjct: 232 ------EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 69 KATDYFNMNRILGQGGQGTVYK------GMLADGRIIAVKKSKVVDESKL-EEFINEVVI 121
K D++++ LG G V K G+ + I ++S+ EE EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
L Q+ H N++ L +L+ E + G LF +L ++ SL+ E ++
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQIL 125
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEK----YRAKIADFGTSRSIAIDQTHVSTK-VQ 236
+ + YLH+ I H D+K NI+L +K K+ DFG + I + V K +
Sbjct: 126 DGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIF 179
Query: 237 GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEG-RNLTTYFVECIE 295
GT ++ PE ++D++S GV+ LL+G P E N+T + E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 296 E--NCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRD 353
E + ++ D +RK + V + KR P + V + +R S
Sbjct: 240 EFFSQTSELAKDFIRK-------LLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVV 292
Query: 354 DENNIQKCY 362
+ N +K Y
Sbjct: 293 NLENFKKQY 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID 227
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R I D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 228 QTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+V + ++ PE +T +SDV+SFGV+L E+ + G P + +E
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYL 159
++E+ IL I H NVV LLG C + PL+V EF G L YL
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID 227
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R I D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 228 QTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+V + ++ PE +T +SDV+SFGV+L E+ + G P + +E
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYL 159
++E+ IL I H NVV LLG C + PL+V EF G L YL
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 168 LTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAID 227
LT E + + +VA+ + +L S + HRD+ + NILL EK KI DFG +R I D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 228 QTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSIWANE 282
+V + ++ PE +T +SDV+SFGV+L E+ + G P + +E
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKG------MLADGRIIAVKKSKV-VDESKLEE 114
+++ + + D + + LG+G G V + A R +AVK K S+
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYL 159
++E+ IL I H NVV LLG C + PL+V EF G L YL
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEF----INEVVIL 122
D+ + Y + +I GQG G V+K G+ +A+KK V+ E++ E F + E+ IL
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKIL 71
Query: 123 SQINHRNVVKLLGCCLEVEVPL--------LVYEFIPNGTLFQYLHDPYEELSLTWEMRL 174
+ H NVV L+ C P LV++F + L L + + +L+ E++
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHD-LAGLLSNVLVKFTLS-EIK- 128
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
R+ + L Y+H + I HRD+K+ N+L+ K+ADFG +R+ ++ + +
Sbjct: 129 RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 235 VQG---TFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE + + D++ G ++ E+ T + PI
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 42/288 (14%)
Query: 76 MNRILGQGGQGTVYKGMLAD-GRIIAVKKS----KVVDESKL---EEFINEVVILSQINH 127
N LGQG ++KG+ + G + ++ KV+D++ E F ++S+++H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+++V G C + +LV EF+ G+L YL +++ W +L +A ++A A+ +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV------QGTFGY 241
+ + H ++ + NILL R + G I + +S V Q +
Sbjct: 130 EENTLI---HGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 242 LDPEYFRSSQFTD-KSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVECIEENCL 299
+ PE + + + +D +SFG L E+ + G KP+S++ + R L Y
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL--DSQRKLQFY---------- 231
Query: 300 FDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERI 347
+ R A + ++++ C++ +RP+ + + +L +
Sbjct: 232 ------EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEF----INEVVIL 122
D+ + Y + +I GQG G V+K G+ +A+KK V+ E++ E F + E+ IL
Sbjct: 15 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKIL 71
Query: 123 SQINHRNVVKLLGCCLEVEVPL--------LVYEFIPNGTLFQYLHDPYEELSLTWEMRL 174
+ H NVV L+ C P LV++F + L L + + +L+ E++
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLS-EIK- 128
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
R+ + L Y+H + I HRD+K+ N+L+ K+ADFG +R+ ++ + +
Sbjct: 129 RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 235 VQG---TFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE + + D++ G ++ E+ T + PI
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 68 DKATDYFNMNRILGQGGQGTVYKG-MLADGRIIAVKKSKVVDESKLEEF----INEVVIL 122
D+ + Y + +I GQG G V+K G+ +A+KK V+ E++ E F + E+ IL
Sbjct: 14 DEVSKYEKLAKI-GQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKIL 70
Query: 123 SQINHRNVVKLLGCCLEVEVPL--------LVYEFIPNGTLFQYLHDPYEELSLTWEMRL 174
+ H NVV L+ C P LV++F + L L + + +L+ E++
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLS-EIK- 127
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
R+ + L Y+H + I HRD+K+ N+L+ K+ADFG +R+ ++ + +
Sbjct: 128 RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 235 VQG---TFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T Y PE + + D++ G ++ E+ T + PI
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
+IA + +AL +LHS L + HRD+K +N+L++ + K+ DFG S + D V+
Sbjct: 113 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 235 VQ-GTFGYLDPEY----FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTY 289
+ G Y+ PE ++ KSD++S G+ ++EL + P S W + L
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-WGTPFQQLK-- 224
Query: 290 FVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ +EE Q+ + E + D +CL + RPT E+
Sbjct: 225 --QVVEEPS------PQLPADKFSAEFV---DFTSQCLKKNSKERPTYPEL 264
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 136
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D + GT Y+ PE + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFE 195
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFET 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 15 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 68
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 129 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F ++LG+G G V A GR A +KK +V + ++ + E +L H
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E + + E+ AL YLHS
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHS 269
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RD+K N++LD+ KI DFG + D + T GT YL PE
Sbjct: 270 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLED 326
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 16 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 69
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 70 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 129
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 130 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 7 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 60
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 61 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 120
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 121 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F ++LG+G G V A GR A +KK +V + ++ + E +L H
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRI-ATEVAEALAYLH 188
+ L + V E+ G LF +L + E R R E+ AL YLH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLH 265
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S + +RD+K N++LD+ KI DFG + D + T GT YL PE
Sbjct: 266 SEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLE 322
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIRKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 162
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D + GT Y+ PE + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFE 221
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFET 243
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 8 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 61
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 122 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 8 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 61
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 122 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 80 LGQGGQGTVYKGMLADGRII----AVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLG 135
LG+GG ++ AD + + V KS ++ + E+ E+ I + H++VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 136 CCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPI 195
+ + +V E +L + LH + L+ E R + ++ YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALT-EPEARYYL-RQIVLGCQYLHRNR---V 160
Query: 196 YHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDK 255
HRD+K N+ L+E KI DFG + + D + GT Y+ PE + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSFE 219
Query: 256 SDVYSFGVVLVELLTGQKPISS 277
DV+S G ++ LL G+ P +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFET 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 138 KYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 138 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 27 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 146 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 138 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 140 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 39 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 158 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 138 KYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
+IA + +AL +LHS L + HRD+K +N+L++ + K+ DFG S + + T
Sbjct: 157 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTI 212
Query: 235 VQGTFGYLDPEY----FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYF 290
G Y+ PE ++ KSD++S G+ ++EL + P S W + L
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-WGTPFQQLK--- 268
Query: 291 VECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ +EE Q+ + E + D +CL + RPT E+
Sbjct: 269 -QVVEEPS------PQLPADKFSAEFV---DFTSQCLKKNSKERPTYPEL 308
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
T+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 138 KYIHSANVL---HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 140 KYIHSANVL---HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + +I + L+ + L+ + ++ L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 140 KYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 74 FNMNRILGQGGQGTVYKGMLADG-RIIAVK---KSKVVDESKLEEFINEVVILSQINHRN 129
F + +++G+G G V L + ++ A+K K +++ ++ F E +L + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + LV ++ G L L +E+ L EM E+ A+ +H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK-FED-RLPEEMARFYLAEMVIAIDSVHQ 193
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
Y+ HRDIK NIL+D ++ADFG+ + D T S+ GT Y+ PE ++
Sbjct: 194 LHYV---HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 250 -----SQFTDKSDVYSFGVVLVELLTGQKPI 275
++ + D +S GV + E+L G+ P
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 67 LDKATDYFNMNRILGQGGQGTVYKGMLADGRI-IAVKK-SKVVDESKLEEFINEVVILSQ 124
D Y N++ I G+G G V ++ +A+KK S ++ + + E+ IL +
Sbjct: 39 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEAL 184
H N++ + + + ++ + L+ + L+ + ++ L
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYL 242
Y+HS+ L HRD+K +N+LL+ KI DFG +R D H T+ T Y
Sbjct: 158 KYIHSANVL---HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 243 DPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLLGC 136
+G G G+V + G +A+KK +S++ + E+++L + H NV+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE--------VAEALAYLH 188
Y+F YL P+ + L M L+ + E + + L Y+H
Sbjct: 92 FTPASSLRNFYDF--------YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPE 245
S+ + HRD+K N+ ++E KI DFG +R H ++ G T Y PE
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPE 193
Query: 246 YFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
S + D++S G ++ E+LTG+
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 72 DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFI--NEVVILSQINHR 128
DY+++ LG G G V++ + A GR+ K + L+++ NE+ I++Q++H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKF--INTPYPLDKYTVKNEISIMNQLHHP 108
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
++ L + +L+ EF+ G LF + E+ ++ + + E L ++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRA--KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
+ I H DIK NI+ + K + KI DFG + + D+ T F PE
Sbjct: 167 EHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA--APEI 221
Query: 247 FRSSQFTDKSDVYSFGVVLVELLTGQKPIS 276
+D+++ GV+ LL+G P +
Sbjct: 222 VDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F ++LG+G G V A GR A +KK +V + ++ + E +L H
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E + + E+ AL YLHS
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHS 127
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RD+K N++LD+ KI DFG + I GT YL PE
Sbjct: 128 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLED 184
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F ++LG+G G V A GR A +KK +V + ++ + E +L H
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E + + E+ AL YLHS
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHS 126
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RD+K N++LD+ KI DFG + I GT YL PE
Sbjct: 127 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLED 183
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 74 FNMNRILGQGGQGTV-YKGMLADGRIIA---VKKSKVVDESKLEEFINEVVILSQINHRN 129
F ++LG+G G V A GR A +KK +V + ++ + E +L H
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHS 189
+ L + V E+ G LF +L E + + E+ AL YLHS
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHS 128
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
+ +RD+K N++LD+ KI DFG + I GT YL PE
Sbjct: 129 EKN--VVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLED 185
Query: 250 SQFTDKSDVYSFGVVLVELLTGQKPI 275
+ + D + GVV+ E++ G+ P
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 78 RILGQGGQGTVYKGM-LADGRIIAVKK--SKVVDESKLEEFINEVVILSQINHRNVVKLL 134
+ +G G QG V G +AVKK +++ + E+V+L +NH+N++ LL
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 135 GCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
E + LV E + + L Q +H + L E + ++ + +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH 141
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S+ I HRD+K +NI++ KI DFG +R+ + + + T T Y PE
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRYYRAPEVIL 196
Query: 249 SSQFTDKSDVYSFGVVLVELLTG 271
+ + D++S G ++ EL+ G
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKG 219
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGR---IIAVK---KSKVVDESKLEEFINEVVILSQ 124
+D + + + +G G G ++ D + ++AVK + + +DE+ E IN
Sbjct: 17 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINH----RS 70
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAE 182
+ H N+V+ L +V E+ G LF+ + + + E + + I+
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 125
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
++Y H+ + + HRD+K N LLD R KI DFG S+S + ST GT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPA 180
Query: 241 YLDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
Y+ PE ++ K +DV+S GV L +L G P E +N + N
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRIL--NVQ 236
Query: 300 FDIIDDQVRKSGEAEEIMA---VSDVAKR 325
+ I D V S E +++ V+D AKR
Sbjct: 237 Y-AIPDYVHISPECRHLISRIFVADPAKR 264
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 73 YFNMNRILGQGGQGTVYKGMLA-DGRIIAVK---KSKVVDESKLEEFINEVVILSQINHR 128
++ + LG G G V G G +AVK + K+ + + E+ L H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 129 NVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
+++KL +V E++ G LF Y+ + L + R+ ++ + Y H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCH 133
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
+ HRD+K N+LLD AKIADFG S ++ D + G+ Y PE
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSC-GSPNYAAPEVIS 188
Query: 249 SSQFT-DKSDVYSFGVVLVELLTGQKP 274
+ + D++S GV+L LL G P
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + LV E + + L Q + ++ L E + ++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELL 269
PE + + D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 14 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 128 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 53 GGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM--LADGRIIAVKKSKVVDES 110
G + R ++F D Y N++ I G+G G V L R+ K S ++
Sbjct: 15 GPEMVRGQVF-----DVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 68
Query: 111 KLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTW 170
+ + E+ IL + H N++ + + + +I + L+ + L+
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
Query: 171 EMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTH 230
+ ++ L Y+HS+ L HRD+K +N+LL+ KI DFG +R D H
Sbjct: 129 DHICYFLYQILRGLKYIHSANVL---HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 231 VS--TKVQGTFGYLDPEYFRSSQ-FTDKSDVYSFGVVLVELLTGQKPI 275
+ T Y PE +S+ +T D++S G +L E+L+ +PI
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 72 DYFNMNRI--LGQGGQGTVYKGMLADGRIIAVKKSKVVDES--KLEEFINEVVILSQINH 127
D+ +N + L + G ++KG G I VK KV D S K +F E L +H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 128 RNVVKLLGCCLEVEV--PLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALA 185
NV+ +LG C P L+ + P G+L+ LH+ + ++ A + A A
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHE-GTNFVVDQSQAVKFALDXARGXA 125
Query: 186 YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPE 245
+LH+ L I + S ++ +DE A+I+ S S ++ PE
Sbjct: 126 FLHTLEPL-IPRHALNSRSVXIDEDXTARISXADVKFSFQ------SPGRXYAPAWVAPE 178
Query: 246 YF-RSSQFTDK--SDVYSFGVVLVELLTGQKPISSI 278
+ + T++ +D +SF V+L EL+T + P + +
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADL 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 25/248 (10%)
Query: 51 SIGGSIDRCRI-FNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVD 108
S+GG+ R + F + ++ + R+L +GG VY+ + GR A+K+ +
Sbjct: 6 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE 65
Query: 109 ESKLEEFINEVVILSQIN-HRNVVKLLGCCL-------EVEVPLLVYEFIPNGTLFQYLH 160
E K I EV + +++ H N+V+ + L+ + G L ++L
Sbjct: 66 EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK 125
Query: 161 DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGT 220
L+ + L+I + A+ ++H PI HRD+K N+LL + K+ DFG+
Sbjct: 126 KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGS 184
Query: 221 SRSI---------AIDQTHVSTKV--QGTFGYLDPE---YFRSSQFTDKSDVYSFGVVLV 266
+ +I A + V ++ T Y PE + + +K D+++ G +L
Sbjct: 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
Query: 267 ELLTGQKP 274
L Q P
Sbjct: 245 LLCFRQHP 252
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 71 TDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLE--EFINEVVILSQINH 127
D + + ++G G G V + + R++A+KK V E ++ + E+ IL+++NH
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLT--WEMRLRIATEVAEALA 185
+VVK+L ++ +P V +F + + +++L T + L I T + L
Sbjct: 112 DHVVKVL----DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 186 ---YLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ-------------- 228
Y+HS+ I HRD+K N L+++ K+ DFG +R++ +
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 229 ------THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQKPI 275
H + G++ ++R+ + +T+ DV+S G + ELL K
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284
Query: 276 SSIWANEG 283
+ A+ G
Sbjct: 285 VAYHADRG 292
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 78 RILGQGGQGTVYKGM-LADGRIIAVKK--SKVVDESKLEEFINEVVILSQINHRNVVKLL 134
+ +G G QG V G +AVKK +++ + E+V+L +NH+N++ LL
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 135 GCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH 188
E + LV E + + L Q +H + L E + ++ + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
S+ I HRD+K +NI++ KI DFG +R+ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVIL 198
Query: 249 SSQFTDKSDVYSFGVVLVELLTG 271
+ D++S G ++ EL+ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGR---IIAVK---KSKVVDESKLEEFINEVVILSQ 124
+D + + + +G G G ++ D + ++AVK + + +DE+ E IN
Sbjct: 18 SDRYELVKDIGAGNFGVAR--LMRDKQANELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAE 182
+ H N+V+ L +V E+ G LF+ + + + E + + I+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
++Y H+ + + HRD+K N LLD R KIADFG S++ + S GT
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA--VGTPA 181
Query: 241 YLDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
Y+ PE ++ K +DV+S GV L +L G P E +N + N
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRIL--NVQ 237
Query: 300 FDIIDDQVRKSGEAEEIMA---VSDVAKR 325
+ I D V S E +++ V+D AKR
Sbjct: 238 Y-AIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 65 KELDKATDYFNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVV 120
KE+ + F + +++G+G G V M RI A+K K +++ ++ F E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
+L + + + L + LV ++ G L L +E+ L +M E+
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFED-KLPEDMARFYIGEM 200
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
A+ +H Y+ HRDIK N+LLD ++ADFG+ + D T S+ GT
Sbjct: 201 VLAIDSIHQLHYV---HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 257
Query: 241 YLDPEYFRS-----SQFTDKSDVYSFGVVLVELLTGQKPI 275
Y+ PE ++ ++ + D +S GV + E+L G+ P
Sbjct: 258 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 79 ILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN-HRNVVKLLGC 136
+LG+G V + L + AVK + EV +L Q HRNV++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHD--PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
E + LV+E + G++ ++H + EL + + +VA AL +LH+
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG--- 131
Query: 195 IYHRDIKSTNILLDEKYR---AKIADFGTSRSIAI--DQTHVSTK----VQGTFGYLDPE 245
I HRD+K NIL + + KI DFG I + D + +ST G+ Y+ PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 246 YF-----RSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+S + + D++S GV+L LL+G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 14/220 (6%)
Query: 65 KELDKATDYFNMNRILGQGGQGTV-YKGMLADGRIIAVK---KSKVVDESKLEEFINEVV 120
KE+ + F + +++G+G G V M RI A+K K +++ ++ F E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 121 ILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEV 180
+L + + + L + LV ++ G L L +E+ L +M E+
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFED-KLPEDMARFYIGEM 184
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
A+ +H Y+ HRDIK N+LLD ++ADFG+ + D T S+ GT
Sbjct: 185 VLAIDSIHQLHYV---HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 241
Query: 241 YLDPEYFRS-----SQFTDKSDVYSFGVVLVELLTGQKPI 275
Y+ PE ++ ++ + D +S GV + E+L G+ P
Sbjct: 242 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLLGC 136
+G G G+V + G +A+KK +S++ + E+++L + H NV+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE--------VAEALAYLH 188
Y+F YL P+ + L M + + E + + L Y+H
Sbjct: 110 FTPASSLRNFYDF--------YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 189 SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---TFGYLDPE 245
S+ + HRD+K N+ ++E KI DFG +R H ++ G T Y PE
Sbjct: 162 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPE 211
Query: 246 YFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
S + D++S G ++ E+LTG+
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 83 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 74 FNMNRILGQGGQGT-VYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQIN-HRNVV 131
F +LG G +GT VY+GM D R +AVK +++ E EV +L + + H NV+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVK--RILPEC-FSFADREVQLLRESDEHPNVI 81
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP-YEELSLTWEMRLRIATEVAEALAYLHSS 190
+ + + + E TL +Y+ + L L + + + LA+LHS
Sbjct: 82 RYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLE---PITLLQQTTSGLAHLHS- 136
Query: 191 AYLPIYHRDIKSTNILLDE-----KYRAKIADFGTSRSIAIDQTHVSTK--VQGTFGYLD 243
L I HRD+K NIL+ K +A I+DFG + +A+ + S + V GT G++
Sbjct: 137 --LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 244 PEYFR---SSQFTDKSDVYSFGVVLVELLT-GQKPI 275
PE T D++S G V +++ G P
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 30/222 (13%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKL--------EEFINEVVIL 122
D + + ++G+G V + + + G+ AVK +VD +K E+ E I
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVK---IVDVAKFTSSPGLSTEDLKREASIC 80
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTL-FQYLHDP-----YEELSLTWEMRLRI 176
+ H ++V+LL + +V+EF+ L F+ + Y E + MR
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR--- 137
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVST 233
++ EAL Y H + I HRD+K N+LL K + K+ DFG + +
Sbjct: 138 --QILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 234 KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+V GT ++ PE + + DV+ GV+L LL+G P
Sbjct: 193 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 83 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + LV E + + L Q + ++ L E + ++
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELL 269
PE + + D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 74 FNMNRILGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVV 131
F + +LG+G G V G I+A+KK + D+ + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+ +I + LH L+ + + A+ LH S
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPEYFR 248
+ HRD+K +N+L++ K+ DFG +R I A D + + + G Y+ ++R
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 249 -------SSQFTDKSDVYSFGVVLVELLTGQKPI 275
S++++ DV+S G +L EL ++PI
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 19 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + LV E + + L Q + ++ L E + ++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 129
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYY 184
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELL 269
PE + + D++S G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 71 TDYFNMNRILGQG--GQGTVYKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQI 125
+D ++ + +G G G + + L ++AVK + +DE+ E IN +
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDENVQREIINH----RSL 73
Query: 126 NHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAEA 183
H N+V+ L ++ E+ G L++ + + + E E R ++
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSE----DEARF-FFQQLLSG 128
Query: 184 LAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
++Y HS + I HRD+K N LLD R KI DFG S+S + ST GT Y
Sbjct: 129 VSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAY 183
Query: 242 LDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKP 274
+ PE ++ K +DV+S GV L +L G P
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 174 LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVST 233
L I ++AEA+ +LHS + HRD+K +NI K+ DFG ++ D+ +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLM---HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 234 KVQ-----------GTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL---EEFINEVVILSQINHRNVVKLLGC 136
+G+G G V++G L G +AVK DE E N V++ H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNILGFIAS 70
Query: 137 CLEVEVP----LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH---- 188
+ L+ + +G+L+ +L + +L + LR+A A LA+LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 189 -SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYLDP 244
+ I HRD KS N+L+ + IAD G + S D + + GT Y+ P
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 245 EYFRSSQFTD------KSDVYSFGVVLVEL 268
E TD +D+++FG+VL E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 74 FNMNRILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVV 131
M + +G+G G V+ G G +AVK +E+ E I + V++ H N++
Sbjct: 39 IQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLM---RHENIL 94
Query: 132 KLLGCCLE----VEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
+ ++ L+ ++ NG+L+ YL + +L + L++A L +L
Sbjct: 95 GFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 188 HSSAY-----LPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHV----STKVQGT 238
H+ + I HRD+KS NIL+ + IAD G + D V +T+V GT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GT 209
Query: 239 FGYLDPEYFRSS------QFTDKSDVYSFGVVLVEL 268
Y+ PE S Q +D+YSFG++L E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P +L FQ Y+ + +L+ +++ + E
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
T Y PE + + D++S G ++ E++ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 28 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 138
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ V V T Y
Sbjct: 139 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYY 193
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 27 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 138 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYY 192
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 80 LGQGGQGTVYKGM--LADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVK----L 133
+G+G G V + R+ K S ++ + + E+ IL + H NV+ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 134 LGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYL 193
LE + + + + L++ L + L+ + ++ L Y+HS+ L
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLL----KSQQLSNDHICYFLYQILRGLKYIHSANVL 166
Query: 194 PIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVS--TKVQGTFGYLDPEYFRSSQ 251
HRD+K +N+L++ KI DFG +R + H T+ T Y PE +S+
Sbjct: 167 ---HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 252 -FTDKSDVYSFGVVLVELLTGQKPI 275
+T D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 64 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 121 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 169 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 223
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P +L FQ Y+ + +L+ +++ + E
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
T Y PE + + D++S G ++ E++ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 74 FNMNRILGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVV 131
F + +LG+G G V G I+A+KK + D+ + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+ +I + LH L+ + + A+ LH S
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQGTFGYLDPEYFR 248
+ HRD+K +N+L++ K+ DFG +R I A D + + + G ++ ++R
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 249 -------SSQFTDKSDVYSFGVVLVELLTGQKPI 275
S++++ DV+S G +L EL ++PI
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTK 234
+IA + +AL +LHS L + HRD+K +N+L++ + K DFG S + D V+
Sbjct: 140 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKD 194
Query: 235 VQ-GTFGYLDPEY----FRSSQFTDKSDVYSFGVVLVELLTGQKPISSIWANEGRNLTTY 289
+ G Y PE ++ KSD++S G+ +EL + P S W + L
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS-WGTPFQQLK-- 251
Query: 290 FVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ +EE Q+ + E + D +CL + RPT E+
Sbjct: 252 --QVVEEPS------PQLPADKFSAEFV---DFTSQCLKKNSKERPTYPEL 291
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 20 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 77 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 124
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 179
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYY 191
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
PE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P +L FQ Y+ + +L+ +++ + E
Sbjct: 83 KNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
T Y PE + + D++S G ++ E++ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 64 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 121 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 169 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 223
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 20 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 77 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 124
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 179
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 27 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 84 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 131
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 186
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVK---KSKVVDESKLEEFINEVVILSQINHRNVVKLLGC 136
+G+G TVYKG+ + + + + + +S+ + F E L + H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 137 CLEV----EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLR-IATEVAEALAYLHSSA 191
+ +LV E +GTL YL + + LR ++ + L +LH+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 192 YLPIYHRDIKSTNILLDEKY-RAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSS 250
PI HRD+K NI + KI D G + + + + V GT + PE +
Sbjct: 150 -PPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXY-EE 204
Query: 251 QFTDKSDVYSFGVVLVELLTGQKPIS 276
++ + DVY+FG +E T + P S
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYS 230
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 25 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 82 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 129
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 130 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 184
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 27 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 84 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 131
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 186
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 19 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 76 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 124 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 178
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 83 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCLEVEVPLLVYEFIPNGTL--FQ--YLHDPYEELSLTWEMRLRIATEVAEA 183
+N++ LL F P TL FQ YL + +L +++ + E
Sbjct: 83 KNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 184 LAY--------LHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKV 235
L Y LHS+ I HRD+K +NI++ KI DFG +R+ + + T
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPY 185
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELL 269
T Y PE + + D++S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 13/209 (6%)
Query: 73 YFNMNRILGQGGQGTVYKGMLADGRII-AVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
Y+ + +G+G G V + RI A KK ++ F E+ I+ ++H N++
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+L + LV E G LF+ + + RI +V A+AY H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCHK-- 124
Query: 192 YLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
L + HRD+K N L K+ DFG + + + TKV GT Y+ P+
Sbjct: 125 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQVL- 180
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ + D +S GV++ LL G P S+
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSA 209
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 13/209 (6%)
Query: 73 YFNMNRILGQGGQGTVYKGMLADGRII-AVKKSKVVDESKLEEFINEVVILSQINHRNVV 131
Y+ + +G+G G V + RI A KK ++ F E+ I+ ++H N++
Sbjct: 27 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+L + LV E G LF+ + + RI +V A+AY H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCHK-- 141
Query: 192 YLPIYHRDIKSTNILL---DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFR 248
L + HRD+K N L K+ DFG + + + TKV GT Y+ P+
Sbjct: 142 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQVL- 197
Query: 249 SSQFTDKSDVYSFGVVLVELLTGQKPISS 277
+ + D +S GV++ LL G P S+
Sbjct: 198 EGLYGPECDEWSAGVMMYVLLCGYPPFSA 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL---EEFINEVVILSQINHRNVVKLLGC 136
+G+G G V++G G +AVK DE E N V++ H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 99
Query: 137 CLEVEVP----LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH---- 188
+ L+ + G+L+ YL + +L LRI +A LA+LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 189 -SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYLDP 244
+ I HRD+KS NIL+ + + IAD G + S + +Q V + GT Y+ P
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 245 EYFRSSQFTD------KSDVYSFGVVLVEL 268
E + D + D+++FG+VL E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
+L+ E+ G +F E+ ++ +R+ ++ E + YLH + I H D+K
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEM-VSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQ 160
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVST--KVQGTFGYLDPEYFRSSQFTDKSDV 258
NILL Y KI DFG SR I H ++ GT YL PE T +D+
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIG----HACELREIMGTPEYLAPEILNYDPITTATDM 216
Query: 259 YSFGVVLVELLTGQKP 274
++ G++ LLT P
Sbjct: 217 WNIGIIAYMLLTHTSP 232
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGR---IIAVK---KSKVVDESKLEEFINEVVILSQ 124
+D + + + +G G G ++ D + ++AVK + + +DE+ E IN
Sbjct: 18 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAE 182
+ H N+V+ L +V E+ G LF+ + + + E + + I+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
++Y H+ + + HRD+K N LLD R KI FG S+S + ST GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPA 181
Query: 241 YLDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
Y+ PE ++ K +DV+S GV L +L G P E +N + N
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRIL--NVQ 237
Query: 300 FDIIDDQVRKSGEAEEIMA---VSDVAKR 325
+ I D V S E +++ V+D AKR
Sbjct: 238 Y-AIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL---EEFINEVVILSQINHRNVVKLLGC 136
+G+G G V++G G +AVK DE E N V++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 137 CLEVEVP----LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH---- 188
+ L+ + G+L+ YL + +L LRI +A LA+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 189 -SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYLDP 244
+ I HRD+KS NIL+ + + IAD G + S + +Q V + GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 245 EYFRSSQFTD------KSDVYSFGVVLVEL 268
E + D + D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 161 DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGT 220
D + + +T E + + +VA + +L S + HRD+ + NILL E KI DFG
Sbjct: 189 DGFYKEPITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGL 245
Query: 221 SRSIAIDQTHVST-KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLT-GQKPISSI 278
+R I + +V + ++ PE ++ KSDV+S+GV+L E+ + G P +
Sbjct: 246 ARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
Query: 279 WANE 282
+E
Sbjct: 306 QMDE 309
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 62 FNSKELDKATDYFNMNRILGQGGQGTVYKGML------ADGRIIAVKKSKV-VDESKLEE 114
+++ + + A + + + LG+G G V + R +AVK K S+ +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 115 FINEVVILSQINHR-NVVKLLGCCLEVEVPLLV-YEFIPNGTLFQYL 159
+ E+ IL+ I H NVV LLG C + PL+V E+ G L YL
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLA-DGRIIAVKKSK----VVDESKLEEFINEVVILSQIN 126
D + + +G G G V G+ +A+KK VV +K + E+ IL
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFK 112
Query: 127 HRNVVKLLGCCLEVEVPL-------LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
H N++ + L VP +V + + L Q +H LT E +
Sbjct: 113 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS---SQPLTLEHVRYFLYQ 167
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQ 236
+ L Y+HS+ + HRD+K +N+L++E KI DFG +R + + + T+
Sbjct: 168 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 237 GTFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQK 273
T Y PE S ++T D++S G + E+L ++
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL---EEFINEVVILSQINHRNVVKLLGC 136
+G+G G V++G G +AVK DE E N V++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 137 CLEVEVP----LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH---- 188
+ L+ + G+L+ YL + +L LRI +A LA+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 189 -SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYLDP 244
+ I HRD+KS NIL+ + + IAD G + S + +Q V + GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 245 EYFRSSQFTD------KSDVYSFGVVLVEL 268
E + D + D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 26/235 (11%)
Query: 50 NSIGGSIDRCRIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVD 108
N+ + +R R KE+D+ F + R+ GQG GTV G + G +A+K KV+
Sbjct: 9 NAAAAADERSR----KEMDR----FQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQ 58
Query: 109 ESKLEEFINEVVI-LSQINHRNVVKL------LGCCLEVEVPL-LVYEFIPNGTLFQYLH 160
+ + +++ L+ ++H N+V+L LG ++ L +V E++P+ TL +
Sbjct: 59 DPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCR 117
Query: 161 DPYEELSLTWEMRLRIAT-EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKY-RAKIADF 218
+ Y + +++ ++ ++ LH + + + HRDIK N+L++E K+ DF
Sbjct: 118 NYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDF 176
Query: 219 GTSRSIAIDQTHVSTKVQGTFGYLDPEY-FRSSQFTDKSDVYSFGVVLVELLTGQ 272
G+++ ++ + +V+ Y PE F + +T D++S G + E++ G+
Sbjct: 177 GSAKKLSPSEPNVAYICSRY--YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 72
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 73 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 125
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 69
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 70 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 122
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 79 ILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN-HRNVVKLLGC 136
+LG+G V + L + AVK + EV +L Q HRNV++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHD--PYEELSLTWEMRLRIATEVAEALAYLHSSAYLP 194
E + LV+E + G++ ++H + EL + + +VA AL +LH+
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHNKG--- 131
Query: 195 IYHRDIKSTNILLDEKYR---AKIADFGTSRSIAI--DQTHVSTK----VQGTFGYLDPE 245
I HRD+K NIL + + KI DF I + D + +ST G+ Y+ PE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 246 YF-----RSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+S + + D++S GV+L LL+G P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 66
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 67 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 119
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLA-DGRIIAVKKSK----VVDESKLEEFINEVVILSQIN 126
D + + +G G G V G+ +A+KK VV +K + E+ IL
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFK 111
Query: 127 HRNVVKLLGCCLEVEVPL-------LVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATE 179
H N++ + L VP +V + + L Q +H LT E +
Sbjct: 112 HDNIIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHS---SQPLTLEHVRYFLYQ 166
Query: 180 VAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVSTKVQ 236
+ L Y+HS+ + HRD+K +N+L++E KI DFG +R + + + T+
Sbjct: 167 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 237 GTFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQK 273
T Y PE S ++T D++S G + E+L ++
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 67
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 68 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 120
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 105
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 106 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 158
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 74 FNMNRILGQGGQGTVYKGML-ADGRIIAVKKSKVVDESKLE-EFINEVVILSQINHRNVV 131
F + +LG+G G V G I+A+KK + D+ + E+ IL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 132 KLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+ +I + LH L+ + + A+ LH S
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSI---AIDQTHVS------TKVQGTFGYL 242
+ HRD+K +N+L++ K+ DFG +R I A D + + T+ T Y
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 243 DPE-YFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
PE S++++ DV+S G +L EL ++PI
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 118 EVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLR 175
E++ + H N+V+ L +V E+ G LF+ + + + E + +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 176 IATEVAEALAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVST 233
I+ ++Y H+ + + HRD+K N LLD R KI DFG S+S + ST
Sbjct: 125 IS-----GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 176
Query: 234 KVQGTFGYLDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVE 292
GT Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 177 V--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHR 232
Query: 293 CIEENCLFDIIDDQVRKSGEAEEIMA---VSDVAKR 325
+ N + I D V S E +++ V+D AKR
Sbjct: 233 IL--NVQY-AIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 80 LGQGGQGTVYKGMLADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL--- 134
+G+G G V++G G +AVK +E E I + V+L H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAAD 92
Query: 135 ----GCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLH-- 188
G ++ LV ++ +G+LF YL+ ++T E +++A A LA+LH
Sbjct: 93 NKDNGTWTQL---WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHME 145
Query: 189 ---SSAYLPIYHRDIKSTNILLDEKYRAKIADFGTS--RSIAIDQTHVSTKVQ-GTFGYL 242
+ I HRD+KS NIL+ + IAD G + A D ++ + GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 243 DPEYFRSS------QFTDKSDVYSFGVVLVEL 268
PE S + ++D+Y+ G+V E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESK--LEEFINEVVILSQINHRNVVKLLGC 136
LG+G G VYK + +A+K+ ++ E + I EV +L ++ HRN+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRL--RIATEVAEALAYLHSSAYLP 194
L++E+ N L +Y+ D ++S MR+ ++ + + HS L
Sbjct: 102 IHHNHRLHLIFEYAEND-LKKYM-DKNPDVS----MRVIKSFLYQLINGVNFCHSRRCL- 154
Query: 195 IYHRDIKSTNILL-----DEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRS 249
HRD+K N+LL E KI DFG +R+ I + ++ T Y PE
Sbjct: 155 --HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLG 211
Query: 250 SQ-FTDKSDVYSFGVVLVELL 269
S+ ++ D++S + E+L
Sbjct: 212 SRHYSTSVDIWSIACIWAEML 232
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 218
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 219 LGVIMYILLCGYPPFYS 235
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVS-TKVQGTFGYLDPEYFRSSQFTDKSDVY 259
N+L K K+ DFG ++ +H S T+ T Y+ PE ++ D++
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT---SHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 260 SFGVVLVELLTGQKPISS 277
S GV++ LL G P S
Sbjct: 202 SLGVIMYILLCGYPPFYS 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 109/253 (43%), Gaps = 37/253 (14%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVVKLLGC 136
+ILG G GTV GR +AVK+ ++D + + E+ +L++ +H NV++ C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKR-MLIDFCDIA--LMEIKLLTESDDHPNVIRYY-C 76
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPY---EELSLTWEMR-LRIATEVAEALAYLHSSAY 192
+ L + + N L + E L L E + + ++A +A+LHS
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 193 LPIYHRDIKSTNILLD-------------EKYRAKIADFGTSRSIAIDQTHVSTKV---Q 236
L I HRD+K NIL+ E R I+DFG + + Q+ T +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 237 GTFGYLDPEYFRSS-------QFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTT 288
GT G+ PE S + T D++S G V +L+ G+ P ++ E N+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIR 252
Query: 289 YFVECIEENCLFD 301
E CL D
Sbjct: 253 GIFSLDEMKCLHD 265
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 254
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 255 LGVIMYILLCGYPPFYS 271
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 248
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 249 LGVIMYILLCGYPPFYS 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 203 LGVIMYILLCGYPPFYS 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 203
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 204 LGVIMYILLCGYPPFYS 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 209
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 210 LGVIMYILLCGYPPFYS 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 208
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 209 LGVIMYILLCGYPPFYS 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 210
Query: 261 FGVVLVELLTGQKPISS 277
GV++ LL G P S
Sbjct: 211 LGVIMYILLCGYPPFYS 227
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 35/269 (13%)
Query: 71 TDYFNMNRILGQGGQGTVYKGMLADGR---IIAVK---KSKVVDESKLEEFINEVVILSQ 124
+D + + + +G G G ++ D + ++AVK + + +DE+ E IN
Sbjct: 18 SDRYELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 125 INHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDP--YEELSLTWEMRLRIATEVAE 182
+ H N+V+ L +V E+ G LF+ + + + E + + I+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS----- 126
Query: 183 ALAYLHSSAYLPIYHRDIKSTNILLD--EKYRAKIADFGTSRSIAIDQTHVSTKVQGTFG 240
++Y H+ + + HRD+K N LLD R KI FG S+S + T GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPA 181
Query: 241 YLDPEYFRSSQFTDK-SDVYSFGVVLVELLTGQKPISSIWANEGRNLTTYFVECIEENCL 299
Y+ PE ++ K +DV+S GV L +L G P E +N + N
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRIL--NVQ 237
Query: 300 FDIIDDQVRKSGEAEEIMA---VSDVAKR 325
+ I D V S E +++ V+D AKR
Sbjct: 238 Y-AIPDYVHISPECRHLISRIFVADPAKR 265
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 80 LGQGGQGTVYKGMLADGR----IIAVKKSKV-----VDESKLEEFINEVVILSQINHRNV 130
LG G G V+ + + + +KK KV +++ KL + E+ ILS++ H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGT-LFQYL--HDPYEELSLTWEMRLRIATEVAEALAYL 187
+K+L LV E +G LF ++ H +E ++ R ++ A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR-----QLVSAVGYL 146
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
I HRDIK NI++ E + K+ DFG++ +++ + GT Y PE
Sbjct: 147 RLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYTFCGTIEYCAPEVL 201
Query: 248 RSSQFTDKS-DVYSFGVVLVELLTGQKPISSI 278
+ + +++S GV L L+ + P +
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 31 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 141
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 142 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYY 196
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELL 269
PE + + D++S G ++ E++
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVVKLLGC 136
+ILG G GTV GR +AVK+ ++D + + E+ +L++ +H NV++ C
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIA--LMEIKLLTESDDHPNVIRYY-C 94
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPY---EELSLTWEMR-LRIATEVAEALAYLHSSAY 192
+ L + + N L + E L L E + + ++A +A+LHS
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 151
Query: 193 LPIYHRDIKSTNILLD-------------EKYRAKIADFGTSRSIAIDQTHVSTKV---Q 236
L I HRD+K NIL+ E R I+DFG + + Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 237 GTFGYLDPEYFRSS---QFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
GT G+ PE S + T D++S G V +L+ G+ P ++ E N+
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFS 270
Query: 293 CIEENCLFD 301
E CL D
Sbjct: 271 LDEMKCLHD 279
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVVKLLGC 136
+ILG G GTV GR +AVK+ ++D + + E+ +L++ +H NV++ C
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIA--LMEIKLLTESDDHPNVIRYY-C 94
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPY---EELSLTWEMR-LRIATEVAEALAYLHSSAY 192
+ L + + N L + E L L E + + ++A +A+LHS
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 151
Query: 193 LPIYHRDIKSTNILLD-------------EKYRAKIADFGTSRSIAIDQTHVSTKV---Q 236
L I HRD+K NIL+ E R I+DFG + + Q +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 237 GTFGYLDPEYFRSS---QFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTTYFVE 292
GT G+ PE S + T D++S G V +L+ G+ P ++ E N+
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFS 270
Query: 293 CIEENCLFD 301
E CL D
Sbjct: 271 LDEMKCLHD 279
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 20 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ + + T T Y
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYY 185
Query: 242 LDPEYFRSSQFTDKSDVYSFGVVLVELL 269
PE + + D++S G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 73 YFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQIN-HRNV 130
Y + +LG+G V + L +G+ AVK + EV L Q ++N+
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 131 VKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSS 190
++L+ + LV+E + G++ ++ ++ R+ +VA AL +LH+
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGSILAHIQ---KQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 191 AYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVS------TKVQGTFGY 241
I HRD+K NIL + + KI DF + ++ + T G+ Y
Sbjct: 131 G---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 242 LDPE----YFRSSQFTDK-SDVYSFGVVLVELLTGQKPI 275
+ PE + + F DK D++S GVVL +L+G P
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 72 DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKLEEFINEVVILSQINH-RN 129
D + + R LG+G V++ + + + + VK K V ++K++ E+ IL + N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 130 VVKLLGCCLEV--EVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
++ L + P LV+E + N T F+ L+ + + + M E+ +AL Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHV-NNTDFKQLYQTLTDYDIRFYM-----YEILKALDYC 147
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRA-KIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEY 246
HS I HRD+K N+++D ++R ++ D+G + Q + + +V + + PE
Sbjct: 148 HSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPEL 202
Query: 247 FRSSQFTDKS-DVYSFGVVLVELLTGQKPI 275
Q D S D++S G +L ++ ++P
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R A +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 45/218 (20%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ GT
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART------------AGTSFM 181
Query: 242 LDPE----YFRSSQ------FTDKSDVYSFGVVLVELL 269
++PE Y+R+ + + + D++S G ++ E++
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 197 HRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKS 256
HRD+K NIL+ A + DFG + + ++ GT Y PE F S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 257 DVYSFGVVLVELLTGQKP 274
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA--KIADFGTSRSIAIDQTHVS 232
+ A + + L LH + I H D+K NILL ++ R+ K+ DFG+S + V
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVY 257
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
T +Q F Y PE +++ D++S G +L ELLTG
Sbjct: 258 TXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L+V E + G LF + D ++ + T I + EA+ YLHS + I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQ-AFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K K+ DFG ++ ++T + Y+ PE ++ D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWS 248
Query: 261 FGVVLVELLTGQKPISS 277
GV+ LL G P S
Sbjct: 249 LGVIXYILLCGYPPFYS 265
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 175 RIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA--KIADFGTSRSIAIDQTHVS 232
+ A + + L LH + I H D+K NILL ++ R+ K+ DFG+S + V
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVY 257
Query: 233 TKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTG 271
T +Q F Y PE +++ D++S G +L ELLTG
Sbjct: 258 TXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 45/218 (20%)
Query: 73 YFNMNRILGQGGQGTV---YKGMLADGRIIAVKK--SKVVDESKLEEFINEVVILSQINH 127
Y N+ I G G QG V Y +L R +A+KK +++ + E+V++ +NH
Sbjct: 26 YQNLKPI-GSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 128 RNVVKLLGCCL------EVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVA 181
+N++ LL E + +V E + + L Q + ++ L E + ++
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGY 241
+ +LHS+ I HRD+K +NI++ KI DFG +R+ GT
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART------------AGTSFM 181
Query: 242 LDPE----YFRSSQ------FTDKSDVYSFGVVLVELL 269
++PE Y+R+ + + + D++S G ++ E++
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 73 YFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRN 129
Y N++ + G G G+V G +AVKK +S + + E+ +L + H N
Sbjct: 20 YQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 130 VVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSLTWEMRLRIATEVAEAL 184
V+ LL +V P E + L +L ++ + LT + + ++ L
Sbjct: 79 VIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 185 AYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDP 244
Y+HS+ I HRD+K +N+ ++E KI DFG +R + T GY+
Sbjct: 135 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVAT 181
Query: 245 EYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
++R+ + + D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 54 GSIDRCR-IFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV 106
GS+ + R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSK 69
Query: 107 VDESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL----- 159
+S + + E+ +L + H NV+ LL +V P E + L +L
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 160 HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
++ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 TSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 183 LARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 80 LGQGGQGTVYK-GMLADGRIIAVKKSKVVDESKLEEFINEVVILSQINHRNVVKLLGCCL 138
LG G G V+K DGR+ AVK+S S + L+++ V CC+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSM----SPFRGPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 139 EVEVPLLVYEFIPNGTLF---QYLHDPYEELSLTWEMRLRIAT------EVAEALAYLHS 189
+E + G L+ + ++ W L A + ALA+LHS
Sbjct: 121 RLE-----QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 190 SAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQ-GTFGYLDPEYFR 248
+ H D+K NI L + R K+ DFG + T + +VQ G Y+ PE +
Sbjct: 176 QG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPELLQ 229
Query: 249 SSQFTDKSDVYSFGVVLVEL 268
S + +DV+S G+ ++E+
Sbjct: 230 GS-YGTAADVFSLGLTILEV 248
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 176 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 200 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 48/292 (16%)
Query: 78 RILGQGGQGTVYKGMLADGRIIAVKKSKVVDESKLEEFINEVVILSQI-NHRNVVKLLGC 136
+ILG G GTV GR +AVK+ ++D + + E+ +L++ +H NV++ C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKR-MLIDFCDIA--LMEIKLLTESDDHPNVIRYY-C 76
Query: 137 CLEVEVPLLVYEFIPNGTLFQYLHDPY---EELSLTWEMR-LRIATEVAEALAYLHSSAY 192
+ L + + N L + E L L E + + ++A +A+LHS
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 193 LPIYHRDIKSTNILLD-------------EKYRAKIADFGTSRSIAIDQTHVSTKV---Q 236
L I HRD+K NIL+ E R I+DFG + + Q +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 237 GTFGYLDPEYFRSS-------QFTDKSDVYSFGVVLVELLT-GQKPISSIWANEGRNLTT 288
GT G+ PE S + T D++S G V +L+ G+ P ++ E N+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIR 252
Query: 289 YFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
E CL D +S AE +D+ + ++ RPT +V
Sbjct: 253 GIFSLDEMKCLHD-------RSLIAE----ATDLISQMIDHDPLKRPTAMKV 293
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 54 GSIDRCR-IFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV 106
GS+ + R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSR 69
Query: 107 VDESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL----- 159
+S + + E+ +L + H NV+ LL +V P E + L +L
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 160 HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
++ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 TSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 183 LARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 54 GSIDRCR-IFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV 106
GS+ + R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSR 69
Query: 107 VDESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL----- 159
+S + + E+ +L + H NV+ LL +V P E + L +L
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 160 HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
++ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 220 TSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 183 LARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 54 GSIDRCRIFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVV 107
GS +R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 1 GSQERP-TFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 108 DESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----H 160
+S + + E+ +L + H NV+ LL +V P E + L +L +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 161 DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGT 220
+ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 115 NIVKSQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGL 171
Query: 221 SRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 172 CRHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 54 GSIDRCR-IFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV 106
GS+ + R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSR 59
Query: 107 VDESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL----- 159
+S + + E+ +L + H NV+ LL +V P E + L +L
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 160 HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
++ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFG 172
Query: 220 TSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 173 LARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 78 RILGQGGQGTVYKGMLADGRI---IAVKKSKVVDESKLE--EFINEVVILSQINHRNVVK 132
R +G G G+V D R+ +AVKK +S + E+ +L + H NV+
Sbjct: 34 RPVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 133 LLGCCLEVEVPLLVYE-----FIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYL 187
LL +V P E ++ + L++ + +L+ E + ++ L Y+
Sbjct: 92 LL----DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 188 HSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYF 247
HS+ I HRD+K +N+ ++E +I DFG +R + T GY+ ++
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----------GYVATRWY 194
Query: 248 RSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
R+ + + D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 27 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 85
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 86 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 199 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 46/215 (21%)
Query: 80 LGQGGQGTVYKGMLADGRI---IAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLL 134
+G G G V + DGR +A+KK +S+L + E+ +L + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 135 GCCLEVEVPLLVYEFIPNGTLFQ----YLHDPYEELSLTWEMRLR---------IATEVA 181
F P+ TL YL P+ L M+ + ++
Sbjct: 91 DV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 182 EALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQG---T 238
+ L Y+H++ I HRD+K N+ ++E KI DFG +R +++ G T
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVT 188
Query: 239 FGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
Y PE + ++T D++S G ++ E++TG+
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 44/293 (15%)
Query: 60 RIFNSKELDKATDYFNMNRILGQGGQGTVYKGM-LADGRIIAVK---KSKVVDESKLE-- 113
++ KE + + + +LG GG G+VY G+ ++D +A+K K ++ D +L
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 98
Query: 114 -EFINEVVILSQINH--RNVVKLLGCCLEVEVPLLVYEFI-PNGTLFQYLHDPYEELSLT 169
EVV+L +++ V++LL + +L+ E P LF ++ E +L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQ 155
Query: 170 WEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQ 228
E+ +V EA+ + H+ L HRDIK NIL+D + K+ DFG+ A+ +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVL---HRDIKDENILIDLNRGELKLIDFGSG---ALLK 209
Query: 229 THVSTKVQGTFGYLDPEYFRSSQFTDKS-DVYSFGVVLVELLTGQKPISSIWANEGRNLT 287
V T GT Y PE+ R ++ +S V+S G++L +++ G P
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE----------- 258
Query: 288 TYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEV 340
+ E I F + R S E + ++ + CL +RPT +E+
Sbjct: 259 -HDEEIIRGQVFF-----RQRVSSECQHLI------RWCLALRPSDRPTFEEI 299
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ I G G G+V G +AVKK +S + +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPI-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 184
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 185 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 54 GSIDRCR-IFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKV 106
GS+ + R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSR 59
Query: 107 VDESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL----- 159
+S + + E+ +L + H NV+ LL +V P E + L +L
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADL 115
Query: 160 HDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFG 219
++ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 220 TSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 173 LARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKL--------EEFINEVVIL 122
D + + ++G+G V + + + G+ AVK +VD +K E+ E I
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVK---IVDVAKFTSSPGLSTEDLKREASIC 82
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTL-FQYLHDP-----YEELSLTWEMRLRI 176
+ H ++V+LL + +V+EF+ L F+ + Y E + MR
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR--- 139
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVST 233
++ EAL Y H + I HRD+K +LL K + K+ FG + +
Sbjct: 140 --QILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 234 KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+V GT ++ PE + + DV+ GV+L LL+G P
Sbjct: 195 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 T-HVSTKVQGTFGYLDPE-YFRSSQFTDKSDVYSFGVVLVELLTGQ 272
T +V+T+ Y PE + + D++S G ++ ELLTG+
Sbjct: 180 TGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 66 ELDKATDYFNMNRILGQGGQGTVYKGMLAD---GRIIAVKKSKVVDESKLEEF-INEVVI 121
E + + LG+G G V++ + D G AVKK + LE F + E+V
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVA 117
Query: 122 LSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYEELSLTWEMR-LRIATEV 180
+ ++ +V L G E + E + G+L Q + +++ E R L +
Sbjct: 118 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQA 173
Query: 181 AEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSRSIAIDQTHVST----KV 235
E L YLH+ I H D+K+ N+LL + RA + DFG + + D S +
Sbjct: 174 LEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 236 QGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
GT ++ PE K D++S +++ +L G P
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 72 DYFNMNRILGQGGQGTVYKGMLAD-GRIIAVKKSKVVDESKL--------EEFINEVVIL 122
D + + ++G+G V + + + G+ AVK +VD +K E+ E I
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVK---IVDVAKFTSSPGLSTEDLKREASIC 80
Query: 123 SQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTL-FQYLHDP-----YEELSLTWEMRLRI 176
+ H ++V+LL + +V+EF+ L F+ + Y E + MR
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR--- 137
Query: 177 ATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRA---KIADFGTSRSIAIDQTHVST 233
++ EAL Y H + I HRD+K +LL K + K+ FG + +
Sbjct: 138 --QILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 234 KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPI 275
+V GT ++ PE + + DV+ GV+L LL+G P
Sbjct: 193 RV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 105 KVVDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP 162
KV+D+SK + ++L H N++ L + + LV E + G L +
Sbjct: 58 KVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF 117
Query: 163 YEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNIL-LDEKYRA---KIADF 218
+ E ++ + + + + YLHS + HRD+K +NIL +DE +I DF
Sbjct: 118 FSEREASF-----VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 219 GTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
G ++ + + + T T ++ PE + + + D++S G++L +L G P ++
Sbjct: 170 GFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 72
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 186 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R + T
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 191
Query: 239 FGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 192 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLLGC 136
+G G G+V G +AVKK +S + + E+ +L + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 97
Query: 137 CLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+V P E + L +L ++ + LT + + ++ L Y+HS+
Sbjct: 98 --DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ 251
I HRD+K +N+ ++E KI DFG +R + T GY+ ++R+ +
Sbjct: 156 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRWYRAPE 202
Query: 252 -------FTDKSDVYSFGVVLVELLTGQ 272
+ D++S G ++ ELLTG+
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 105 KVVDESKLEEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL--HDP 162
KV+D+SK + ++L H N++ L + + LV E + G L +
Sbjct: 58 KVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF 117
Query: 163 YEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNIL-LDEKYRA---KIADF 218
+ E ++ + + + + YLHS + HRD+K +NIL +DE +I DF
Sbjct: 118 FSEREASF-----VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 219 GTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKPISS 277
G ++ + + + T T ++ PE + + + D++S G++L +L G P ++
Sbjct: 170 GFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 54 GSIDRCRIFNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVV 107
GS +R F +EL+K Y N++ + G G G+V G +AVKK
Sbjct: 1 GSQERP-TFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRP 58
Query: 108 DESKL--EEFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----H 160
+S + + E+ +L + H NV+ LL +V P E + L +L +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 161 DPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGT 220
+ + LT + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG
Sbjct: 115 NIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 171
Query: 221 SRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
+R + T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 172 ARHTDDEMT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R + T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 185
Query: 239 FGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 186 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 6 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 64
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 65 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 121 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 177
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 178 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 31 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 90 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 202
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 203 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 5 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 64 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 177 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 106 VVDESKLEEF-INEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYLHDPYE 164
V + +LE F + E+V + ++ +V L G E + E + G+L Q + +
Sbjct: 87 AVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----K 142
Query: 165 ELSLTWEMR-LRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLD-EKYRAKIADFGTSR 222
++ E R L + E L YLH+ I H D+K+ N+LL + RA + DFG +
Sbjct: 143 QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHAL 199
Query: 223 SIAIDQTHVST----KVQGTFGYLDPEYFRSSQFTDKSDVYSFGVVLVELLTGQKP 274
+ D S + GT ++ PE K D++S +++ +L G P
Sbjct: 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 5 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 64 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 120 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 177 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 19 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 77
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 78 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 190
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 191 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 86
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 200 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 27 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 85
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 86 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 199 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L++ E + G LF + + ++ + T I ++ A+ +LHS I HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 157
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K + K+ DFG ++ Q + T + Y+ PE ++ D++S
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 214
Query: 261 FGVVLVELLTGQKPISSIWANEGRNLT 287
GV++ LL G P ++N G+ ++
Sbjct: 215 LGVIMYILLCGFPP---FYSNTGQAIS 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 176 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Query: 179 EVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGT 238
++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R + T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------- 186
Query: 239 FGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 187 -GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 28 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 87 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 193
Query: 229 THVSTKVQG---TFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
H ++ G T Y PE + + D++S G ++ ELLTG+
Sbjct: 194 -HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 182 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 185 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 144 LLVYEFIPNGTLFQYLHDPYEELSLTWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKST 203
L++ E + G LF + + ++ + T I ++ A+ +LHS I HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPE 138
Query: 204 NILLDEKYR---AKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQFTDKSDVYS 260
N+L K + K+ DFG ++ Q + T + Y+ PE ++ D++S
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 195
Query: 261 FGVVLVELLTGQKPISSIWANEGRNLT 287
GV++ LL G P ++N G+ ++
Sbjct: 196 LGVIMYILLCGFPP---FYSNTGQAIS 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 15 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 74 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 186
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 63 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 169
Query: 229 THVSTKVQG---TFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
H ++ G T Y PE + + D++S G ++ ELLTG+
Sbjct: 170 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 14 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 73 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 186 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 10 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 69 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 182 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 180 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 80 LGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--EEFINEVVILSQINHRNVVKLLGC 136
+G G G+V + G IAVKK +S + + E+ +L + H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 116
Query: 137 CLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSLTWEMRLRIATEVAEALAYLHSSA 191
+V P E + L +L ++ + LT + + ++ L Y+HS+
Sbjct: 117 --DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 174
Query: 192 YLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQTHVSTKVQGTFGYLDPEYFRSSQ 251
I HRD+K +N+ ++E KI DFG +R + T GY+ ++R+ +
Sbjct: 175 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRWYRAPE 221
Query: 252 -------FTDKSDVYSFGVVLVELLTGQ 272
+ D++S G ++ ELLTG+
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 13 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 72 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 185 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 7 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 65
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 66 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R +
Sbjct: 122 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 178
Query: 229 THVSTKVQGTFGYLDPEYFRSSQ-------FTDKSDVYSFGVVLVELLTGQ 272
T GY+ ++R+ + + D++S G ++ ELLTG+
Sbjct: 179 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 62 FNSKELDKAT-----DYFNMNRILGQGGQGTVYKGM-LADGRIIAVKKSKVVDESKL--E 113
F +EL+K Y N++ + G G G+V G +AVKK +S + +
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 114 EFINEVVILSQINHRNVVKLLGCCLEVEVPLLVYEFIPNGTLFQYL-----HDPYEELSL 168
E+ +L + H NV+ LL +V P E + L +L ++ + L
Sbjct: 67 RTYRELRLLKHMKHENVIGLL----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 169 TWEMRLRIATEVAEALAYLHSSAYLPIYHRDIKSTNILLDEKYRAKIADFGTSRSIAIDQ 228
T + + ++ L Y+HS+ I HRD+K +N+ ++E KI DFG +R
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 229 THVSTKVQG---TFGYLDPEYFRS-SQFTDKSDVYSFGVVLVELLTGQ 272
H ++ G T Y PE + + D++S G ++ ELLTG+
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,622,104
Number of Sequences: 62578
Number of extensions: 428711
Number of successful extensions: 3675
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 1012
Number of HSP's gapped (non-prelim): 1098
length of query: 374
length of database: 14,973,337
effective HSP length: 100
effective length of query: 274
effective length of database: 8,715,537
effective search space: 2388057138
effective search space used: 2388057138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)