Query 017264
Match_columns 374
No_of_seqs 336 out of 1935
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:38:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 99.9 2.4E-24 8.2E-29 181.5 4.9 107 175-304 6-113 (150)
2 1ejf_A Progesterone receptor P 99.9 6.3E-23 2.2E-27 168.3 7.5 103 175-300 5-109 (125)
3 2xcm_C SGT1-like protein, cyto 99.9 3.1E-22 1.1E-26 155.5 9.5 90 173-262 2-91 (92)
4 1wh0_A Ubiquitin carboxyl-term 99.9 3.7E-22 1.3E-26 164.7 8.2 91 173-263 19-122 (134)
5 1x5m_A Calcyclin-binding prote 99.9 1.6E-21 5.5E-26 160.4 11.1 89 174-262 21-114 (127)
6 2cg9_X CO-chaperone protein SB 99.8 1.5E-22 5.1E-27 167.7 1.9 105 174-301 7-127 (134)
7 1rl1_A Suppressor of G2 allele 99.8 7.6E-21 2.6E-25 153.6 9.5 93 172-264 8-100 (114)
8 4gco_A Protein STI-1; structur 99.8 1.7E-19 5.7E-24 147.8 17.1 112 2-113 13-124 (126)
9 2o30_A Nuclear movement protei 99.8 1.8E-19 6.3E-24 148.8 8.9 85 174-262 5-90 (131)
10 2hr2_A Hypothetical protein; a 99.8 1.3E-18 4.4E-23 147.8 10.8 120 1-120 10-152 (159)
11 2jtt_C Calcyclin-binding prote 99.8 8.6E-20 2.9E-24 111.7 1.6 32 312-343 4-35 (35)
12 3rkv_A Putative peptidylprolyl 99.8 1.4E-17 4.7E-22 141.2 15.0 120 2-121 11-149 (162)
13 3upv_A Heat shock protein STI1 99.8 2.2E-17 7.7E-22 133.6 15.5 116 2-117 4-125 (126)
14 3sz7_A HSC70 cochaperone (SGT) 99.8 6.8E-17 2.3E-21 137.2 18.6 120 2-121 11-132 (164)
15 1wgv_A KIAA1068 protein; CS do 99.7 9.1E-18 3.1E-22 137.3 11.1 89 175-263 21-112 (124)
16 4gcn_A Protein STI-1; structur 99.7 8.3E-17 2.8E-21 131.7 14.4 111 2-113 8-125 (127)
17 3gyz_A Chaperone protein IPGC; 99.7 1.7E-16 5.8E-21 134.4 16.2 102 3-104 37-138 (151)
18 2vgx_A Chaperone SYCD; alterna 99.7 3.8E-16 1.3E-20 131.3 16.3 118 3-120 22-139 (148)
19 2xcb_A PCRH, regulatory protei 99.7 4.6E-16 1.6E-20 129.2 16.0 118 3-120 19-136 (142)
20 4ga2_A E3 SUMO-protein ligase 99.7 9.7E-16 3.3E-20 128.9 14.3 111 4-114 33-144 (150)
21 2rh0_A NUDC domain-containing 99.7 2E-16 7E-21 134.2 8.7 85 174-262 14-103 (157)
22 3q49_B STIP1 homology and U bo 99.7 3.6E-15 1.2E-19 121.6 15.9 119 2-120 9-132 (137)
23 1wfi_A Nuclear distribution ge 99.6 5.4E-16 1.8E-20 128.0 10.2 86 175-263 9-99 (131)
24 2fbn_A 70 kDa peptidylprolyl i 99.6 9.6E-15 3.3E-19 127.7 17.5 120 2-121 38-173 (198)
25 3qor_A Nuclear migration prote 99.6 1.1E-15 3.7E-20 124.3 9.6 87 175-264 18-109 (121)
26 1elw_A TPR1-domain of HOP; HOP 99.6 2.2E-14 7.4E-19 112.6 16.7 114 2-115 4-117 (118)
27 1hxi_A PEX5, peroxisome target 99.6 4.9E-15 1.7E-19 120.1 13.3 102 4-105 19-120 (121)
28 3urz_A Uncharacterized protein 99.6 1E-14 3.5E-19 129.1 15.9 116 2-117 4-135 (208)
29 1p5q_A FKBP52, FK506-binding p 99.6 1.6E-14 5.5E-19 137.8 18.0 119 2-120 147-280 (336)
30 2lni_A Stress-induced-phosphop 99.6 1.3E-14 4.4E-19 116.8 14.3 115 3-117 17-131 (133)
31 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 1.1E-14 3.8E-19 144.8 16.7 119 2-120 268-401 (457)
32 2xev_A YBGF; tetratricopeptide 99.6 2.1E-14 7.2E-19 115.7 14.9 115 1-115 1-121 (129)
33 2vyi_A SGTA protein; chaperone 99.6 6.6E-14 2.3E-18 111.7 17.3 117 3-119 13-129 (131)
34 2dba_A Smooth muscle cell asso 99.6 4.3E-14 1.5E-18 116.0 15.8 113 2-114 28-143 (148)
35 1a17_A Serine/threonine protei 99.6 1.4E-13 4.9E-18 115.1 18.0 113 2-114 13-125 (166)
36 4gyw_A UDP-N-acetylglucosamine 99.6 3.5E-14 1.2E-18 148.8 16.8 113 3-115 10-122 (723)
37 1elr_A TPR2A-domain of HOP; HO 99.6 1E-13 3.6E-18 110.7 15.6 118 2-120 4-128 (131)
38 1ihg_A Cyclophilin 40; ppiase 99.6 3E-14 1E-18 137.9 14.8 119 2-120 223-357 (370)
39 2pl2_A Hypothetical conserved 99.6 5.9E-14 2E-18 125.0 14.9 115 3-117 6-131 (217)
40 4ga2_A E3 SUMO-protein ligase 99.5 6.1E-15 2.1E-19 124.0 7.4 114 7-120 2-115 (150)
41 4i17_A Hypothetical protein; T 99.5 2.7E-13 9.4E-18 120.5 17.5 111 2-112 7-118 (228)
42 1na0_A Designed protein CTPR3; 99.5 5.3E-13 1.8E-17 105.5 17.2 114 3-116 10-123 (125)
43 4gyw_A UDP-N-acetylglucosamine 99.5 1.2E-13 4.2E-18 144.6 16.7 116 2-117 43-158 (723)
44 2pl2_A Hypothetical conserved 99.5 2.8E-13 9.6E-18 120.6 16.2 117 3-120 40-167 (217)
45 2if4_A ATFKBP42; FKBP-like, al 99.5 2.7E-14 9.1E-19 136.4 9.6 118 2-119 179-313 (338)
46 2h6f_A Protein farnesyltransfe 99.5 1.3E-13 4.5E-18 134.1 14.6 118 3-120 98-216 (382)
47 1zu2_A Mitochondrial import re 99.5 1.1E-13 3.6E-18 117.3 11.5 107 12-118 12-139 (158)
48 3vtx_A MAMA; tetratricopeptide 99.5 6.4E-13 2.2E-17 113.9 16.7 113 2-114 5-117 (184)
49 2h6f_A Protein farnesyltransfe 99.5 1.8E-13 6.3E-18 133.0 14.0 115 2-116 131-246 (382)
50 2c2l_A CHIP, carboxy terminus 99.5 4.1E-13 1.4E-17 124.6 15.3 102 2-103 4-105 (281)
51 2kck_A TPR repeat; tetratricop 99.5 2.8E-13 9.6E-18 105.2 11.6 102 3-104 7-111 (112)
52 3k9i_A BH0479 protein; putativ 99.5 5.8E-14 2E-18 112.4 7.7 100 14-113 2-104 (117)
53 4i17_A Hypothetical protein; T 99.5 9.3E-13 3.2E-17 117.0 15.7 117 4-120 44-169 (228)
54 2e2e_A Formate-dependent nitri 99.5 2E-12 6.8E-17 110.4 16.5 113 3-115 45-160 (177)
55 3urz_A Uncharacterized protein 99.5 2.2E-12 7.4E-17 114.0 17.2 105 8-113 60-199 (208)
56 3vtx_A MAMA; tetratricopeptide 99.4 6.4E-12 2.2E-16 107.6 16.9 118 3-120 40-157 (184)
57 1hh8_A P67PHOX, NCF-2, neutrop 99.4 9.1E-12 3.1E-16 109.0 17.8 102 3-104 38-155 (213)
58 1wao_1 Serine/threonine protei 99.4 5E-13 1.7E-17 133.7 10.9 114 4-117 8-121 (477)
59 3gyz_A Chaperone protein IPGC; 99.4 2.1E-13 7.1E-18 115.3 6.0 104 17-120 17-120 (151)
60 3uq3_A Heat shock protein STI1 99.4 4.4E-12 1.5E-16 113.2 15.1 111 3-113 140-256 (258)
61 2fo7_A Synthetic consensus TPR 99.4 9.1E-12 3.1E-16 99.2 15.4 114 3-116 2-115 (136)
62 1xnf_A Lipoprotein NLPI; TPR, 99.4 1E-11 3.6E-16 112.2 17.3 111 3-113 44-154 (275)
63 3qky_A Outer membrane assembly 99.4 4.2E-12 1.4E-16 115.4 14.2 106 2-107 15-134 (261)
64 2l6j_A TPR repeat-containing p 99.4 3.5E-13 1.2E-17 105.3 6.0 94 2-95 4-103 (111)
65 1hh8_A P67PHOX, NCF-2, neutrop 99.4 6.6E-12 2.3E-16 109.9 14.5 114 3-119 7-136 (213)
66 3as5_A MAMA; tetratricopeptide 99.4 2.5E-11 8.7E-16 102.3 16.6 116 3-118 43-158 (186)
67 2kat_A Uncharacterized protein 99.4 1.4E-11 4.6E-16 97.7 13.8 101 20-120 3-105 (115)
68 4abn_A Tetratricopeptide repea 99.4 8.2E-12 2.8E-16 124.5 15.1 118 3-120 171-308 (474)
69 3ieg_A DNAJ homolog subfamily 99.3 3.4E-11 1.2E-15 112.5 18.2 116 5-120 237-356 (359)
70 2vsy_A XCC0866; transferase, g 99.3 1.8E-11 6.2E-16 124.3 16.4 116 2-117 23-138 (568)
71 3as5_A MAMA; tetratricopeptide 99.3 1.9E-11 6.5E-16 103.1 13.7 117 3-119 9-125 (186)
72 1fch_A Peroxisomal targeting s 99.3 2.4E-11 8.2E-16 114.8 15.8 118 3-120 218-346 (368)
73 2q7f_A YRRB protein; TPR, prot 99.3 6.1E-11 2.1E-15 105.1 17.3 115 4-118 59-173 (243)
74 2yhc_A BAMD, UPF0169 lipoprote 99.3 3.2E-11 1.1E-15 107.6 15.4 106 2-107 4-133 (225)
75 3qou_A Protein YBBN; thioredox 99.3 2.4E-11 8.1E-16 113.0 15.0 117 3-119 118-270 (287)
76 3uq3_A Heat shock protein STI1 99.3 2.4E-11 8.3E-16 108.4 14.5 119 2-120 79-223 (258)
77 4eqf_A PEX5-related protein; a 99.3 1.9E-11 6.6E-16 115.9 14.6 116 4-119 215-342 (365)
78 4gco_A Protein STI-1; structur 99.3 6.3E-12 2.1E-16 102.4 9.6 94 27-120 4-97 (126)
79 3ieg_A DNAJ homolog subfamily 99.3 4.3E-11 1.5E-15 111.8 16.7 110 2-111 3-115 (359)
80 2q7f_A YRRB protein; TPR, prot 99.3 4.4E-11 1.5E-15 106.0 15.8 117 3-119 92-208 (243)
81 4abn_A Tetratricopeptide repea 99.3 1.5E-11 5.1E-16 122.6 14.1 115 2-117 102-226 (474)
82 2pzi_A Probable serine/threoni 99.3 5.6E-12 1.9E-16 131.4 11.4 117 3-120 434-550 (681)
83 3u4t_A TPR repeat-containing p 99.3 2.5E-11 8.4E-16 109.9 13.8 116 3-118 75-190 (272)
84 2vq2_A PILW, putative fimbrial 99.3 7.2E-11 2.4E-15 103.0 16.0 115 3-117 9-126 (225)
85 3qky_A Outer membrane assembly 99.3 4.2E-11 1.5E-15 108.7 14.9 116 2-117 52-198 (261)
86 2vgx_A Chaperone SYCD; alterna 99.3 4.9E-12 1.7E-16 105.9 7.7 99 22-120 7-105 (148)
87 2fo7_A Synthetic consensus TPR 99.3 8.8E-11 3E-15 93.3 14.7 99 4-102 37-135 (136)
88 2pzi_A Probable serine/threoni 99.3 7.3E-12 2.5E-16 130.5 10.5 112 2-114 467-578 (681)
89 3u4t_A TPR repeat-containing p 99.3 1.6E-11 5.6E-16 111.1 11.5 118 3-120 4-124 (272)
90 4eqf_A PEX5-related protein; a 99.3 3E-11 1E-15 114.6 13.7 115 6-120 181-297 (365)
91 2vq2_A PILW, putative fimbrial 99.3 1.2E-10 4.1E-15 101.6 15.8 116 4-119 44-162 (225)
92 2r5s_A Uncharacterized protein 99.3 4.6E-11 1.6E-15 102.2 12.9 116 4-119 8-159 (176)
93 2ho1_A Type 4 fimbrial biogene 99.3 5.8E-11 2E-15 106.3 14.1 114 3-116 38-153 (252)
94 2ho1_A Type 4 fimbrial biogene 99.3 9.5E-11 3.3E-15 104.9 15.2 117 3-119 72-190 (252)
95 2gw1_A Mitochondrial precursor 99.3 1.3E-10 4.3E-15 114.6 17.1 103 2-105 6-108 (514)
96 1w3b_A UDP-N-acetylglucosamine 99.3 5.4E-11 1.8E-15 113.9 13.9 115 3-117 238-352 (388)
97 2e2e_A Formate-dependent nitri 99.3 1.4E-11 4.7E-16 105.1 8.7 112 8-119 16-130 (177)
98 2y4t_A DNAJ homolog subfamily 99.2 1.7E-10 5.9E-15 112.1 17.6 108 3-110 27-137 (450)
99 3cv0_A Peroxisome targeting si 99.2 1.1E-10 3.8E-15 107.9 15.3 118 3-120 173-302 (327)
100 2y4t_A DNAJ homolog subfamily 99.2 1.9E-10 6.6E-15 111.7 17.7 116 5-120 260-379 (450)
101 1w3b_A UDP-N-acetylglucosamine 99.2 1.2E-10 4.2E-15 111.4 15.9 112 5-116 172-283 (388)
102 3hym_B Cell division cycle pro 99.2 8.8E-11 3E-15 108.7 14.3 112 3-114 194-314 (330)
103 3hym_B Cell division cycle pro 99.2 1.6E-10 5.5E-15 106.9 15.2 115 4-118 92-207 (330)
104 2yhc_A BAMD, UPF0169 lipoprote 99.2 1E-10 3.5E-15 104.2 13.4 118 3-120 42-200 (225)
105 2kc7_A BFR218_protein; tetratr 99.2 2.8E-11 9.5E-16 93.0 8.2 92 5-104 3-95 (99)
106 2xcb_A PCRH, regulatory protei 99.2 2.3E-11 7.8E-16 100.5 8.2 98 23-120 5-102 (142)
107 1na3_A Designed protein CTPR2; 99.2 2E-10 6.8E-15 86.1 12.8 80 4-83 11-90 (91)
108 1fch_A Peroxisomal targeting s 99.2 1.8E-10 6E-15 108.8 15.0 104 4-107 66-169 (368)
109 3mkr_A Coatomer subunit epsilo 99.2 2.7E-10 9.3E-15 106.1 15.3 97 14-110 178-275 (291)
110 3fp2_A TPR repeat-containing p 99.2 9.3E-11 3.2E-15 116.5 12.0 103 2-105 25-127 (537)
111 1p5q_A FKBP52, FK506-binding p 99.2 2.6E-10 8.8E-15 108.5 13.9 96 2-97 196-292 (336)
112 3mkr_A Coatomer subunit epsilo 99.2 5.1E-10 1.7E-14 104.3 15.4 116 3-118 131-248 (291)
113 3cv0_A Peroxisome targeting si 99.2 4.3E-10 1.5E-14 103.8 14.5 106 4-109 23-128 (327)
114 1a17_A Serine/threonine protei 99.2 5.8E-10 2E-14 92.8 13.8 96 3-98 48-145 (166)
115 3fp2_A TPR repeat-containing p 99.1 4E-10 1.4E-14 111.9 14.1 116 4-119 278-393 (537)
116 1qqe_A Vesicular transport pro 99.1 3.2E-10 1.1E-14 105.3 12.4 104 2-105 77-193 (292)
117 3ma5_A Tetratricopeptide repea 99.1 4.6E-10 1.6E-14 87.1 11.1 74 31-104 2-75 (100)
118 1xnf_A Lipoprotein NLPI; TPR, 99.1 2.2E-10 7.4E-15 103.5 10.5 109 12-120 15-127 (275)
119 2vsy_A XCC0866; transferase, g 99.1 7.9E-10 2.7E-14 112.1 15.5 103 3-105 58-163 (568)
120 1qqe_A Vesicular transport pro 99.1 2.8E-10 9.7E-15 105.7 11.1 103 3-105 118-234 (292)
121 4g1t_A Interferon-induced prot 99.1 1.7E-09 5.9E-14 105.9 17.1 118 3-120 52-188 (472)
122 2l6j_A TPR repeat-containing p 99.1 9.6E-10 3.3E-14 85.4 12.0 86 35-120 3-94 (111)
123 4gcn_A Protein STI-1; structur 99.1 3.7E-10 1.3E-14 91.8 9.7 77 36-112 8-84 (127)
124 3edt_B KLC 2, kinesin light ch 99.1 3.6E-10 1.2E-14 101.8 10.5 117 3-119 44-184 (283)
125 3upv_A Heat shock protein STI1 99.1 5.7E-10 1.9E-14 89.5 10.6 87 34-120 2-88 (126)
126 1na3_A Designed protein CTPR2; 99.1 1E-09 3.5E-14 82.1 11.0 83 34-116 7-89 (91)
127 2xpi_A Anaphase-promoting comp 99.1 2.2E-09 7.5E-14 108.3 15.8 114 4-117 443-563 (597)
128 1pc2_A Mitochondria fission pr 99.0 2E-09 6.9E-14 90.1 11.9 105 16-120 12-121 (152)
129 1hxi_A PEX5, peroxisome target 99.0 2.9E-09 1E-13 85.6 12.4 83 38-120 19-101 (121)
130 2xpi_A Anaphase-promoting comp 99.0 4.5E-09 1.5E-13 106.0 16.1 115 4-118 375-489 (597)
131 3sz7_A HSC70 cochaperone (SGT) 99.0 1.7E-09 5.7E-14 91.1 10.7 88 32-119 7-94 (164)
132 4a1s_A PINS, partner of inscut 99.0 1.8E-09 6.1E-14 103.7 12.3 117 3-119 49-181 (411)
133 2gw1_A Mitochondrial precursor 99.0 2.3E-09 7.9E-14 105.5 13.2 112 4-115 374-494 (514)
134 3q49_B STIP1 homology and U bo 99.0 3.6E-09 1.2E-13 85.5 12.1 91 30-120 3-93 (137)
135 1kt0_A FKBP51, 51 kDa FK506-bi 99.0 1.5E-09 5.1E-14 107.7 11.7 90 3-92 318-407 (457)
136 2fbn_A 70 kDa peptidylprolyl i 99.0 2.2E-09 7.5E-14 93.3 11.3 95 3-97 89-184 (198)
137 2vyi_A SGTA protein; chaperone 99.0 4.5E-09 1.5E-13 83.1 12.2 84 3-86 47-130 (131)
138 2ond_A Cleavage stimulation fa 99.0 3.4E-09 1.2E-13 98.9 12.9 112 4-115 101-214 (308)
139 3ro2_A PINS homolog, G-protein 99.0 3.6E-09 1.2E-13 97.2 12.8 117 3-119 6-138 (338)
140 3rkv_A Putative peptidylprolyl 99.0 2.2E-09 7.7E-14 90.1 10.3 85 3-87 64-149 (162)
141 2lni_A Stress-induced-phosphop 99.0 4E-09 1.4E-13 84.1 11.3 83 3-85 51-133 (133)
142 2if4_A ATFKBP42; FKBP-like, al 99.0 4.7E-10 1.6E-14 106.8 6.7 102 4-105 232-334 (338)
143 1wao_1 Serine/threonine protei 99.0 7.3E-10 2.5E-14 110.6 8.3 102 2-103 40-154 (477)
144 3edt_B KLC 2, kinesin light ch 99.0 4E-09 1.4E-13 94.9 12.2 97 3-99 86-198 (283)
145 1ouv_A Conserved hypothetical 99.0 2.2E-08 7.6E-13 91.0 16.9 109 2-116 6-122 (273)
146 2kck_A TPR repeat; tetratricop 99.0 3E-09 1E-13 82.0 9.5 86 32-117 2-89 (112)
147 3sf4_A G-protein-signaling mod 99.0 3.9E-09 1.3E-13 100.4 12.2 118 2-119 9-142 (406)
148 3k9i_A BH0479 protein; putativ 99.0 4E-09 1.4E-13 83.8 10.3 78 3-80 28-105 (117)
149 3ro3_A PINS homolog, G-protein 98.9 3.4E-09 1.2E-13 86.8 9.6 100 2-101 9-120 (164)
150 2ond_A Cleavage stimulation fa 98.9 1.2E-08 4.2E-13 95.1 14.6 104 4-107 52-171 (308)
151 2kc7_A BFR218_protein; tetratr 98.9 8E-09 2.7E-13 78.9 10.6 69 39-107 3-72 (99)
152 2ifu_A Gamma-SNAP; membrane fu 98.9 4.1E-09 1.4E-13 98.5 10.3 100 3-104 117-228 (307)
153 3ulq_A Response regulator aspa 98.9 3.8E-09 1.3E-13 101.2 10.3 114 3-116 144-276 (383)
154 3u3w_A Transcriptional activat 98.9 3E-09 1E-13 98.4 9.2 98 3-100 156-267 (293)
155 2hr2_A Hypothetical protein; a 98.9 5.4E-09 1.8E-13 88.4 9.9 85 36-120 11-118 (159)
156 3nf1_A KLC 1, kinesin light ch 98.9 3.8E-09 1.3E-13 96.7 9.8 117 3-119 70-210 (311)
157 1ihg_A Cyclophilin 40; ppiase 98.9 8.6E-09 3E-13 99.4 12.5 90 3-92 274-363 (370)
158 3ma5_A Tetratricopeptide repea 98.9 9.4E-09 3.2E-13 79.6 10.2 83 2-84 7-91 (100)
159 2qfc_A PLCR protein; TPR, HTH, 98.9 9.3E-09 3.2E-13 95.1 11.4 98 3-100 156-267 (293)
160 3nf1_A KLC 1, kinesin light ch 98.9 6.2E-09 2.1E-13 95.2 9.9 97 3-99 112-224 (311)
161 3ro3_A PINS homolog, G-protein 98.9 1.2E-08 4.2E-13 83.4 10.6 99 3-101 50-160 (164)
162 2qfc_A PLCR protein; TPR, HTH, 98.9 2.6E-08 8.9E-13 92.1 14.0 113 5-117 118-249 (293)
163 3gw4_A Uncharacterized protein 98.9 6.8E-09 2.3E-13 89.3 9.2 98 3-100 27-137 (203)
164 1na0_A Designed protein CTPR3; 98.9 3.9E-08 1.3E-12 76.9 12.8 82 3-84 44-125 (125)
165 1dce_A Protein (RAB geranylger 98.9 4E-08 1.4E-12 100.1 16.0 116 3-118 64-192 (567)
166 1ouv_A Conserved hypothetical 98.8 9.7E-08 3.3E-12 86.7 16.8 106 3-114 39-156 (273)
167 3u3w_A Transcriptional activat 98.8 5.8E-09 2E-13 96.5 8.6 113 6-118 119-250 (293)
168 3dra_A Protein farnesyltransfe 98.8 4.5E-08 1.5E-12 92.0 14.7 116 4-119 34-159 (306)
169 3ulq_A Response regulator aspa 98.8 1.4E-08 4.9E-13 97.2 11.0 99 3-101 185-295 (383)
170 3bee_A Putative YFRE protein; 98.8 7.1E-08 2.4E-12 74.1 12.5 74 32-105 2-78 (93)
171 2ifu_A Gamma-SNAP; membrane fu 98.8 6.9E-09 2.4E-13 96.9 8.1 101 3-104 77-189 (307)
172 4g1t_A Interferon-induced prot 98.8 4.3E-08 1.5E-12 95.9 14.0 103 3-105 248-369 (472)
173 3dra_A Protein farnesyltransfe 98.8 6.7E-08 2.3E-12 90.8 14.3 116 4-119 105-235 (306)
174 3n71_A Histone lysine methyltr 98.8 2E-08 6.9E-13 100.4 11.3 117 3-119 310-450 (490)
175 3q15_A PSP28, response regulat 98.8 3.8E-08 1.3E-12 94.2 12.9 101 2-102 182-293 (378)
176 1zu2_A Mitochondrial import re 98.8 1.9E-08 6.7E-13 84.9 9.3 70 2-71 36-126 (158)
177 4f3v_A ESX-1 secretion system 98.8 2.9E-08 9.9E-13 91.9 11.4 102 4-106 137-243 (282)
178 3qou_A Protein YBBN; thioredox 98.8 2.9E-08 1E-12 91.9 11.4 90 9-98 192-283 (287)
179 1elw_A TPR1-domain of HOP; HOP 98.8 6.3E-08 2.1E-12 75.0 11.6 86 35-120 3-88 (118)
180 4a1s_A PINS, partner of inscut 98.8 2E-08 7E-13 96.2 10.4 96 5-100 266-373 (411)
181 3sf4_A G-protein-signaling mod 98.8 2.3E-08 7.8E-13 95.0 10.7 118 3-120 228-363 (406)
182 2r5s_A Uncharacterized protein 98.8 1.9E-08 6.4E-13 85.7 9.1 82 17-98 89-172 (176)
183 1dce_A Protein (RAB geranylger 98.8 4.7E-08 1.6E-12 99.6 13.5 113 3-115 108-237 (567)
184 3rjv_A Putative SEL1 repeat pr 98.8 4.9E-08 1.7E-12 86.1 11.8 109 2-115 18-136 (212)
185 3q15_A PSP28, response regulat 98.8 3.1E-08 1E-12 94.8 11.0 118 2-119 141-276 (378)
186 2dba_A Smooth muscle cell asso 98.8 5.8E-08 2E-12 78.8 11.2 90 31-120 23-115 (148)
187 3rjv_A Putative SEL1 repeat pr 98.7 5.7E-08 2E-12 85.7 11.5 108 3-114 51-172 (212)
188 3qww_A SET and MYND domain-con 98.7 5E-08 1.7E-12 96.0 12.0 109 4-112 300-429 (433)
189 2kat_A Uncharacterized protein 98.7 7.6E-08 2.6E-12 75.7 10.7 82 3-84 20-103 (115)
190 2xev_A YBGF; tetratricopeptide 98.7 1.5E-07 5E-12 74.9 12.5 80 3-82 40-122 (129)
191 2c2l_A CHIP, carboxy terminus 98.7 7E-08 2.4E-12 89.1 11.9 87 33-119 1-87 (281)
192 3dss_A Geranylgeranyl transfer 98.7 2.6E-07 9E-12 87.5 15.8 110 4-113 110-236 (331)
193 2v5f_A Prolyl 4-hydroxylase su 98.7 1.7E-07 5.6E-12 73.3 11.4 76 2-77 5-87 (104)
194 3gw4_A Uncharacterized protein 98.7 5.8E-08 2E-12 83.4 9.4 117 3-120 67-196 (203)
195 3ro2_A PINS homolog, G-protein 98.7 2.6E-08 8.8E-13 91.4 7.4 100 3-102 184-295 (338)
196 1nzn_A CGI-135 protein, fissio 98.7 2.1E-07 7.1E-12 75.2 11.7 109 11-119 10-123 (126)
197 3q7a_A Farnesyltransferase alp 98.7 4.4E-07 1.5E-11 86.5 16.0 112 9-120 60-175 (349)
198 3dss_A Geranylgeranyl transfer 98.7 5.9E-07 2E-11 85.1 16.7 114 4-117 66-192 (331)
199 3qwp_A SET and MYND domain-con 98.7 2.1E-07 7E-12 91.6 13.3 109 3-111 288-417 (429)
200 2v5f_A Prolyl 4-hydroxylase su 98.7 4.1E-07 1.4E-11 71.0 12.5 86 35-120 4-96 (104)
201 1elr_A TPR2A-domain of HOP; HO 98.6 8.8E-08 3E-12 75.6 8.4 84 35-118 3-93 (131)
202 3q7a_A Farnesyltransferase alp 98.6 3.3E-07 1.1E-11 87.4 12.7 108 6-113 127-251 (349)
203 4f3v_A ESX-1 secretion system 98.6 9.3E-08 3.2E-12 88.5 7.8 114 6-120 106-224 (282)
204 2ooe_A Cleavage stimulation fa 98.6 3.7E-07 1.3E-11 91.4 12.7 112 4-115 323-436 (530)
205 1klx_A Cysteine rich protein B 98.5 1.2E-06 4E-11 72.0 12.8 89 8-100 31-127 (138)
206 3ly7_A Transcriptional activat 98.5 1.7E-06 5.9E-11 82.6 15.5 101 3-104 197-344 (372)
207 2ooe_A Cleavage stimulation fa 98.5 1.2E-06 3.9E-11 87.8 14.3 105 4-108 274-394 (530)
208 1hz4_A MALT regulatory protein 98.4 1.1E-06 3.7E-11 83.3 11.3 99 4-102 55-167 (373)
209 1hz4_A MALT regulatory protein 98.4 1.8E-06 6.3E-11 81.7 12.2 97 4-100 95-204 (373)
210 2xm6_A Protein corresponding t 98.4 2.5E-06 8.7E-11 84.5 12.7 104 4-111 330-447 (490)
211 3n71_A Histone lysine methyltr 98.3 9.8E-07 3.3E-11 88.2 8.2 99 2-100 351-465 (490)
212 3u64_A Protein TP_0956; tetrat 98.3 3.6E-06 1.2E-10 77.6 11.2 86 18-103 179-273 (301)
213 2xm6_A Protein corresponding t 98.3 1.5E-05 5.2E-10 78.8 16.8 106 3-114 40-157 (490)
214 3bee_A Putative YFRE protein; 98.3 3.7E-06 1.3E-10 64.4 8.9 68 2-69 6-76 (93)
215 3o48_A Mitochondria fission 1 98.3 9.1E-06 3.1E-10 65.8 11.4 102 18-120 23-128 (134)
216 3e4b_A ALGK; tetratricopeptide 98.3 7.4E-06 2.5E-10 80.7 13.4 107 4-115 178-294 (452)
217 1y8m_A FIS1; mitochondria, unk 98.2 3.1E-05 1.1E-09 63.5 14.0 88 33-120 36-127 (144)
218 1klx_A Cysteine rich protein B 98.2 1.2E-05 4.1E-10 65.8 11.7 93 15-115 8-104 (138)
219 1pc2_A Mitochondria fission pr 98.2 7.2E-06 2.5E-10 68.4 9.3 77 3-79 33-114 (152)
220 3e4b_A ALGK; tetratricopeptide 98.2 1.4E-05 4.7E-10 78.7 12.6 99 6-113 217-327 (452)
221 3ffl_A Anaphase-promoting comp 98.0 2.8E-05 9.6E-10 65.4 10.3 108 5-113 23-164 (167)
222 3mv2_B Coatomer subunit epsilo 98.0 4.3E-05 1.5E-09 71.5 12.3 99 4-102 102-210 (310)
223 3gla_A Low molecular weight he 98.0 2.7E-05 9.3E-10 60.3 9.1 78 175-252 6-98 (100)
224 1xi4_A Clathrin heavy chain; a 98.0 3.6E-05 1.2E-09 84.3 12.5 105 4-116 1197-1326(1630)
225 4b4t_Q 26S proteasome regulato 98.0 3.2E-05 1.1E-09 74.4 11.0 65 36-100 135-205 (434)
226 1b89_A Protein (clathrin heavy 98.0 1.6E-05 5.5E-10 77.8 8.8 103 4-116 124-253 (449)
227 2k8q_A Protein SHQ1; beta-sand 98.0 7.9E-06 2.7E-10 66.1 5.1 82 175-261 5-92 (134)
228 4fei_A Heat shock protein-rela 97.9 6.6E-05 2.2E-09 58.4 9.8 79 175-253 8-96 (102)
229 3mv2_B Coatomer subunit epsilo 97.9 4.1E-05 1.4E-09 71.6 10.1 99 9-112 183-295 (310)
230 3aab_A Putative uncharacterize 97.8 0.0001 3.4E-09 59.4 8.9 79 175-253 26-117 (123)
231 3eud_A Protein SHQ1; CS domain 97.8 0.00011 3.6E-09 57.5 8.4 82 175-261 19-106 (115)
232 4b4t_Q 26S proteasome regulato 97.7 9.5E-05 3.2E-09 71.0 9.8 97 3-99 136-245 (434)
233 2wj5_A Heat shock protein beta 97.7 0.00019 6.6E-09 55.6 8.9 78 176-253 4-90 (101)
234 1xi4_A Clathrin heavy chain; a 97.7 0.00019 6.6E-09 78.7 11.6 79 33-117 1102-1180(1630)
235 1gme_A Heat shock protein 16.9 97.6 0.00027 9.2E-09 59.0 9.1 80 174-253 44-139 (151)
236 4eld_A MJ16.5-P1, small heat s 97.6 0.00029 9.8E-09 59.5 9.1 78 176-253 59-152 (161)
237 3qwp_A SET and MYND domain-con 97.5 0.00015 5.1E-09 71.1 7.5 81 2-82 329-425 (429)
238 1nzn_A CGI-135 protein, fissio 97.5 0.00053 1.8E-08 55.2 8.7 77 3-79 36-117 (126)
239 3qww_A SET and MYND domain-con 97.4 0.0002 6.9E-09 70.3 7.2 71 2-72 340-423 (433)
240 3u64_A Protein TP_0956; tetrat 97.4 0.0018 6.2E-08 59.6 12.7 81 32-112 148-247 (301)
241 3l1e_A Alpha-crystallin A chai 97.4 0.00061 2.1E-08 53.2 8.1 77 177-253 6-91 (106)
242 3ly7_A Transcriptional activat 97.3 0.00064 2.2E-08 64.9 8.9 69 5-74 280-348 (372)
243 3q9p_A Heat shock protein beta 97.3 0.0017 5.9E-08 48.5 9.6 73 179-251 3-84 (85)
244 2ff4_A Probable regulatory pro 97.2 0.0046 1.6E-07 59.5 14.1 95 4-98 117-233 (388)
245 3o48_A Mitochondria fission 1 97.2 0.0025 8.5E-08 51.5 10.1 77 3-79 41-121 (134)
246 1y8m_A FIS1; mitochondria, unk 97.2 0.0039 1.3E-07 51.0 11.2 77 3-79 40-120 (144)
247 2y1y_A Alpha-crystallin B chai 97.1 0.0011 3.6E-08 50.2 6.9 74 180-253 3-85 (90)
248 3ffl_A Anaphase-promoting comp 97.1 0.0017 5.9E-08 54.5 8.3 78 2-80 63-165 (167)
249 1b89_A Protein (clathrin heavy 97.0 0.0012 3.9E-08 64.7 7.4 96 4-101 150-274 (449)
250 2klr_A Alpha-crystallin B chai 96.9 0.002 6.8E-08 55.0 7.2 78 176-253 66-152 (175)
251 4h7y_A Dual specificity protei 96.9 0.024 8.1E-07 46.8 12.8 101 4-105 15-129 (161)
252 4e6h_A MRNA 3'-END-processing 96.8 0.0093 3.2E-07 61.7 12.5 98 5-102 437-536 (679)
253 4e6h_A MRNA 3'-END-processing 96.7 0.01 3.4E-07 61.5 11.5 106 7-112 474-583 (679)
254 2bol_A TSP36, small heat shock 96.5 0.01 3.5E-07 55.3 9.3 79 175-253 100-190 (314)
255 4gns_B Protein CSD3, chitin bi 96.0 0.016 5.4E-07 60.4 8.7 80 18-97 301-398 (754)
256 2uy1_A Cleavage stimulation fa 95.9 0.12 4E-06 51.2 14.4 100 5-106 216-356 (493)
257 1zbp_A Hypothetical protein VP 95.7 0.16 5.4E-06 46.0 12.7 63 9-71 4-66 (273)
258 2uy1_A Cleavage stimulation fa 94.9 0.38 1.3E-05 47.5 13.9 90 6-96 290-380 (493)
259 3txn_A 26S proteasome regulato 94.8 0.28 9.5E-06 47.1 12.2 93 7-99 104-210 (394)
260 4gns_B Protein CSD3, chitin bi 94.7 0.091 3.1E-06 54.7 9.1 54 5-58 340-393 (754)
261 3kae_A CDC27, possible protein 94.6 0.71 2.4E-05 38.9 12.4 92 8-104 39-148 (242)
262 1ya0_A SMG-7 transcript varian 94.5 0.27 9.2E-06 48.7 11.6 80 38-117 154-233 (497)
263 4g26_A Pentatricopeptide repea 94.3 0.77 2.6E-05 45.4 14.6 101 5-105 108-212 (501)
264 4b4t_R RPN7, 26S proteasome re 93.7 0.33 1.1E-05 47.1 10.5 97 5-101 134-239 (429)
265 1zbp_A Hypothetical protein VP 93.4 0.31 1E-05 44.1 8.8 65 45-109 6-70 (273)
266 1ya0_A SMG-7 transcript varian 93.1 0.42 1.4E-05 47.4 10.2 78 5-82 155-232 (497)
267 2ff4_A Probable regulatory pro 92.7 0.45 1.5E-05 45.5 9.4 60 5-64 174-233 (388)
268 4h7y_A Dual specificity protei 92.0 1 3.5E-05 37.1 9.3 73 11-84 69-141 (161)
269 2bol_A TSP36, small heat shock 91.4 0.6 2.1E-05 43.3 8.3 71 181-251 231-313 (314)
270 4b4t_P 26S proteasome regulato 91.0 3.5 0.00012 40.0 13.8 94 6-99 141-247 (445)
271 4g26_A Pentatricopeptide repea 90.6 3.4 0.00012 40.7 13.5 92 15-106 83-178 (501)
272 3mkq_A Coatomer beta'-subunit; 89.0 2.5 8.5E-05 43.4 11.6 83 9-96 659-762 (814)
273 4fhn_B Nucleoporin NUP120; pro 89.0 1.5 5E-05 48.0 10.2 92 6-97 846-965 (1139)
274 3kae_A CDC27, possible protein 88.4 5 0.00017 33.8 10.6 86 4-97 4-89 (242)
275 3mkq_B Coatomer subunit alpha; 87.0 3.4 0.00012 34.8 9.0 87 6-97 9-116 (177)
276 3mkq_A Coatomer beta'-subunit; 85.1 9.5 0.00033 38.9 13.3 89 4-103 683-779 (814)
277 3spa_A Mtrpol, DNA-directed RN 84.2 16 0.00056 39.3 14.4 95 5-100 130-231 (1134)
278 2w2u_A Hypothetical P60 katani 83.7 4.3 0.00015 29.6 7.2 29 3-31 20-48 (83)
279 3mkq_B Coatomer subunit alpha; 83.6 9.1 0.00031 32.2 10.1 84 4-95 36-127 (177)
280 2v6y_A AAA family ATPase, P60 83.4 4.6 0.00016 29.4 7.2 28 4-31 13-40 (83)
281 1wy6_A Hypothetical protein ST 83.2 7.7 0.00026 31.5 8.8 53 13-65 102-154 (172)
282 3txn_A 26S proteasome regulato 81.2 18 0.00063 34.4 12.5 74 41-114 104-186 (394)
283 4b4t_S RPN3, 26S proteasome re 79.6 4.5 0.00015 40.0 7.7 67 36-104 231-304 (523)
284 2cfu_A SDSA1; SDS-hydrolase, l 79.0 3.6 0.00012 42.1 7.1 51 36-86 449-499 (658)
285 3mkr_B Coatomer subunit alpha; 78.4 40 0.0014 31.0 13.3 98 5-102 105-230 (320)
286 3lpz_A GET4 (YOR164C homolog); 77.4 26 0.00088 32.5 11.8 27 68-94 134-160 (336)
287 4a5x_A MITD1, MIT domain-conta 77.0 3.4 0.00012 30.4 4.6 29 3-31 17-45 (86)
288 3ax2_A Mitochondrial import re 73.1 9.9 0.00034 27.0 6.0 33 6-38 21-53 (73)
289 1wfd_A Hypothetical protein 15 72.8 4.9 0.00017 29.9 4.6 26 5-30 18-43 (93)
290 2v6x_A Vacuolar protein sortin 72.6 5 0.00017 29.2 4.6 27 4-30 15-41 (85)
291 2p58_C Putative type III secre 72.5 23 0.00079 26.9 8.1 64 48-117 19-82 (116)
292 2wpv_A GET4, UPF0363 protein Y 72.2 41 0.0014 30.8 11.7 27 68-94 132-158 (312)
293 2vkj_A TM1634; membrane protei 71.7 7.5 0.00026 28.6 5.1 29 3-31 54-82 (106)
294 2cpt_A SKD1 protein, vacuolar 71.6 4.7 0.00016 31.5 4.5 13 18-30 15-27 (117)
295 3mv2_A Coatomer subunit alpha; 69.9 30 0.001 31.9 10.1 100 5-104 117-241 (325)
296 3t5v_B Nuclear mRNA export pro 66.7 18 0.00061 35.1 8.4 87 17-103 141-254 (455)
297 2crb_A Nuclear receptor bindin 66.4 8.3 0.00028 28.6 4.5 26 71-96 16-41 (97)
298 4b4t_R RPN7, 26S proteasome re 66.4 13 0.00045 35.6 7.4 64 36-99 131-197 (429)
299 3ax2_A Mitochondrial import re 65.9 18 0.0006 25.7 6.0 39 74-112 21-59 (73)
300 2ijq_A Hypothetical protein; s 65.3 34 0.0012 28.1 8.7 57 42-98 38-103 (161)
301 4gq2_M Nucleoporin NUP120; bet 65.2 33 0.0011 36.5 10.9 94 8-105 816-933 (950)
302 4fhn_B Nucleoporin NUP120; pro 63.0 46 0.0016 36.2 11.7 90 9-102 819-931 (1139)
303 2uwj_G Type III export protein 61.4 25 0.00087 26.6 6.4 16 42-57 45-60 (115)
304 1om2_A Protein (mitochondrial 58.3 14 0.00046 27.7 4.5 29 6-34 24-52 (95)
305 3ph0_C ASCG; type III secretio 58.1 31 0.0011 23.0 5.7 49 41-90 11-60 (61)
306 4b4t_S RPN3, 26S proteasome re 56.4 16 0.00054 36.1 5.9 60 7-68 236-302 (523)
307 2vkj_A TM1634; membrane protei 56.3 45 0.0015 24.5 6.8 49 69-118 52-104 (106)
308 3t5x_A PCI domain-containing p 56.1 27 0.00091 29.8 6.8 33 4-36 16-48 (203)
309 2rpa_A Katanin P60 ATPase-cont 55.7 11 0.00037 27.2 3.4 27 5-31 15-41 (78)
310 3re2_A Predicted protein; meni 55.3 15 0.00052 34.4 5.2 23 73-95 299-321 (472)
311 2yhe_A SEC-alkyl sulfatase; hy 59.3 2.7 9.1E-05 43.2 0.0 52 37-88 462-513 (668)
312 3u84_A Menin; MLL, JUND, ledgf 54.2 21 0.0007 34.2 6.0 44 20-63 297-345 (550)
313 1qsa_A Protein (soluble lytic 53.7 77 0.0026 31.9 10.7 50 48-97 297-346 (618)
314 1qsa_A Protein (soluble lytic 53.5 44 0.0015 33.7 8.9 113 4-117 216-332 (618)
315 4gq2_M Nucleoporin NUP120; bet 53.4 27 0.00093 37.2 7.7 52 42-97 816-867 (950)
316 2w2u_A Hypothetical P60 katani 52.4 60 0.002 23.3 7.2 22 76-97 25-46 (83)
317 4aez_C MAD3, mitotic spindle c 52.1 1.2E+02 0.004 26.3 13.4 64 53-116 131-197 (223)
318 2v6y_A AAA family ATPase, P60 51.0 57 0.0019 23.4 6.9 26 90-115 38-63 (83)
319 2crb_A Nuclear receptor bindin 49.3 27 0.00094 25.8 4.7 28 36-63 15-42 (97)
320 4a5x_A MITD1, MIT domain-conta 48.4 67 0.0023 23.2 6.9 23 75-97 21-43 (86)
321 2rpa_A Katanin P60 ATPase-cont 46.1 67 0.0023 22.9 6.4 26 73-98 15-40 (78)
322 4gq4_A Menin; tumor suppressor 45.7 33 0.0011 32.8 6.0 45 20-64 282-331 (489)
323 2cfu_A SDSA1; SDS-hydrolase, l 45.6 47 0.0016 33.7 7.7 51 70-120 449-499 (658)
324 2ijq_A Hypothetical protein; s 43.9 96 0.0033 25.4 7.9 60 4-63 34-102 (161)
325 3re2_A Predicted protein; meni 42.7 74 0.0025 29.9 7.6 47 19-65 274-325 (472)
326 1om2_A Protein (mitochondrial 42.3 36 0.0012 25.3 4.6 35 75-109 25-59 (95)
327 1wfd_A Hypothetical protein 15 41.1 96 0.0033 22.7 6.9 15 81-95 26-40 (93)
328 2dl1_A Spartin; SPG20, MIT, st 40.9 70 0.0024 24.7 6.1 16 52-67 19-34 (116)
329 2v6x_A Vacuolar protein sortin 39.4 1E+02 0.0035 21.9 6.9 19 79-97 22-40 (85)
330 1wy6_A Hypothetical protein ST 38.3 1.4E+02 0.0046 24.2 7.6 34 67-100 122-155 (172)
331 3qnk_A Putative lipoprotein; a 37.8 89 0.003 30.5 8.2 64 36-99 109-211 (517)
332 3t5x_A PCI domain-containing p 37.8 68 0.0023 27.2 6.4 35 36-70 14-48 (203)
333 1sz9_A PCF11 protein; RNA poly 37.7 21 0.00072 28.7 3.0 23 315-337 85-107 (144)
334 2o8p_A 14-3-3 domain containin 37.5 2E+02 0.0069 24.9 10.3 52 13-64 136-196 (227)
335 2p58_C Putative type III secre 37.3 1.3E+02 0.0046 22.7 8.3 83 6-94 11-93 (116)
336 2cwy_A Hypothetical protein TT 37.1 93 0.0032 22.9 6.3 54 43-98 8-67 (94)
337 2uwj_G Type III export protein 36.9 1.4E+02 0.0046 22.7 7.3 74 39-118 9-82 (115)
338 3hdx_A SUSD homolog, SUSD supe 36.7 1E+02 0.0034 29.7 8.3 64 36-99 112-226 (478)
339 2pmr_A Uncharacterized protein 36.2 36 0.0012 24.9 3.7 38 18-63 29-66 (87)
340 2oo2_A Hypothetical protein AF 36.0 36 0.0012 24.8 3.7 24 39-62 38-61 (86)
341 4a1g_A Mitotic checkpoint seri 35.6 1.7E+02 0.0059 23.5 9.2 50 53-102 82-133 (152)
342 2cpt_A SKD1 protein, vacuolar 33.2 54 0.0019 25.3 4.6 10 54-63 17-26 (117)
343 4gq4_A Menin; tumor suppressor 32.7 1.3E+02 0.0043 28.8 7.6 63 36-98 262-331 (489)
344 3u84_A Menin; MLL, JUND, ledgf 32.4 1.3E+02 0.0043 28.9 7.6 44 55-98 298-346 (550)
345 3jq1_A SUSD superfamily protei 32.1 88 0.003 30.2 7.0 63 36-98 110-208 (481)
346 3spa_A Mtrpol, DNA-directed RN 31.6 2.9E+02 0.0098 29.9 11.0 67 37-104 128-201 (1134)
347 3i4g_A SUSD-like carbohydrate 29.8 1.4E+02 0.0049 29.1 8.2 79 20-98 97-226 (528)
348 2ynq_A ESSB; membrane protein, 29.1 2.3E+02 0.008 23.0 10.7 86 4-95 10-98 (161)
349 4b4t_P 26S proteasome regulato 28.5 3.8E+02 0.013 25.3 16.8 61 37-97 138-204 (445)
350 4b4t_O 26S proteasome regulato 28.3 2.5E+02 0.0086 26.1 9.3 88 11-98 85-197 (393)
351 3qtm_A Uncharacterized protein 28.1 2.8E+02 0.0094 24.9 8.6 115 6-120 26-169 (346)
352 3clj_A Protein NRD1; CTD-inter 27.0 34 0.0012 28.0 2.5 23 315-337 100-122 (157)
353 3myv_A SUSD superfamily protei 26.7 1.5E+02 0.0051 28.3 7.5 31 69-99 189-219 (454)
354 3lxu_X Tripeptidyl-peptidase 2 26.7 3.9E+02 0.013 29.6 11.2 41 48-89 1296-1336(1354)
355 2xze_A STAM-binding protein; h 25.9 79 0.0027 25.4 4.5 30 2-31 40-69 (146)
356 3ckc_A SUSD; TPR repeat, carbo 25.8 2.9E+02 0.0099 26.5 9.6 79 20-98 104-231 (527)
357 3t5v_B Nuclear mRNA export pro 25.2 1.4E+02 0.0048 28.8 6.9 59 10-68 184-253 (455)
358 3myv_A SUSD superfamily protei 24.9 1.4E+02 0.0047 28.5 6.9 14 36-49 111-124 (454)
359 2br9_A 14-3-3E, 14-3-3 protein 24.7 1E+02 0.0034 26.9 5.2 14 49-62 186-199 (234)
360 2cwy_A Hypothetical protein TT 23.7 1.9E+02 0.0064 21.1 5.9 57 6-64 5-67 (94)
361 3isy_A Bsupi, intracellular pr 23.6 1E+02 0.0035 23.8 4.6 50 180-229 15-67 (120)
362 3kez_A Putative sugar binding 23.5 1.7E+02 0.0059 27.9 7.3 29 70-98 196-224 (461)
363 3may_A RV0203, possible export 23.4 52 0.0018 24.7 2.7 32 314-345 30-61 (101)
364 3lew_A SUSD-like carbohydrate 23.3 1.8E+02 0.0062 28.0 7.5 30 70-99 203-232 (495)
365 3kez_A Putative sugar binding 23.1 1.5E+02 0.0051 28.3 6.8 14 36-49 117-130 (461)
366 3esl_A Checkpoint serine/threo 22.9 3.5E+02 0.012 22.9 11.5 80 4-83 81-162 (202)
367 2ymb_A MITD1, MIT domain-conta 22.8 18 0.00061 32.3 0.0 26 5-30 26-51 (257)
368 3otn_A SUSD superfamily protei 22.8 1.2E+02 0.0041 29.2 6.0 63 36-98 116-225 (482)
369 3lew_A SUSD-like carbohydrate 22.6 1.9E+02 0.0063 28.0 7.4 14 36-49 119-132 (495)
370 2wvi_A Mitotic checkpoint seri 22.4 3.2E+02 0.011 22.3 9.2 50 53-102 77-128 (164)
371 2e2a_A Protein (enzyme IIA); h 22.4 1E+02 0.0035 23.2 4.2 27 2-28 20-46 (105)
372 3mcx_A SUSD superfamily protei 22.2 1.8E+02 0.0063 27.8 7.2 30 70-99 202-231 (477)
373 4a1g_A Mitotic checkpoint seri 22.0 3.1E+02 0.011 22.0 9.0 51 21-71 84-136 (152)
374 2wvi_A Mitotic checkpoint seri 22.0 3.2E+02 0.011 22.2 10.3 51 21-71 79-131 (164)
375 1wcr_A PTS system, N, N'-diace 21.8 1.1E+02 0.0037 23.0 4.2 27 2-28 18-44 (103)
376 4aez_C MAD3, mitotic spindle c 21.2 3.9E+02 0.013 22.9 9.3 50 20-69 132-183 (223)
377 1o9d_A 14-3-3-like protein C; 21.0 1.3E+02 0.0044 26.7 5.2 13 83-95 191-203 (260)
378 2qx5_A Nucleoporin NIC96; mRNA 20.8 2.1E+02 0.0071 29.0 7.4 30 73-103 539-570 (661)
379 1q0v_A Hydrophilic protein; ha 20.7 33 0.0011 24.7 1.0 21 328-348 12-32 (81)
380 3k1s_A PTS system, cellobiose- 20.5 1.2E+02 0.004 23.1 4.2 27 2-28 22-48 (109)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.89 E-value=2.4e-24 Score=181.48 Aligned_cols=107 Identities=24% Similarity=0.361 Sum_probs=92.3
Q ss_pred CccccccCCeEEEEEEeCCCCCCceEEEEe-eeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcEEEEEEeecCC
Q 017264 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 253 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~ 253 (374)
+|.||||.+.|+|+|+++++ +++.|+|+ +++|+|++...+|..|.++++||++|+|+ |+|+|++++|+|+|+|+++
T Consensus 6 ~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 6 EVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp CEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECCS
T ss_pred cEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEEEEECCC
Confidence 79999999999999999987 68999999 79999998866777899999999999999 9999999999999999999
Q ss_pred CCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHHHhhh
Q 017264 254 IQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQVKKE 304 (374)
Q Consensus 254 ~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~dWdk~~~e~~~~ 304 (374)
..|++|++... +.+.|. ++|||+|.+|++++
T Consensus 83 ~~W~rL~k~~~---------------K~~~~l-----k~Dwdkw~dedeee 113 (150)
T 2kmw_A 83 SWWTRLLKSEE---------------KPAPYI-----KVDWNKWCDEDEEV 113 (150)
T ss_dssp SCCSCSBSCCS---------------SCCTTE-----EECSSSSCCSSCCC
T ss_pred CcCcccccCCc---------------ccCccc-----cccchhcCCchhcc
Confidence 99999997531 113343 67999999664433
No 2
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.87 E-value=6.3e-23 Score=168.26 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=90.0
Q ss_pred CccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEc-CCCCeeeeccccccccccCceEEEEcCcEEEEEEeecCC
Q 017264 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDV-PGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAEP 253 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~-~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~~ 253 (374)
+|+||||.+.|+|+|+++++ +++.|+|++++|+|.+.. .+|..|.++++||++|+|++|+++|.+++|+|+|+|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 79999999999999999985 799999999999999875 567789999999999999999999999999999999986
Q ss_pred -CCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHH
Q 017264 254 -IQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQ 300 (374)
Q Consensus 254 -~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~dWdk~~~e 300 (374)
..|++|++.. .++.+ .++|||+|.+|
T Consensus 83 ~~~W~rL~~~~----------------~K~~~-----lk~D~dkw~de 109 (125)
T 1ejf_A 83 GQSWPRLTKER----------------AKLNW-----LSVDFNNWKDW 109 (125)
T ss_dssp TCCCSSSBSSC----------------CCCTT-----EEECTTTCCCC
T ss_pred CCCCCceecCC----------------Ccccc-----ccCChHHhCCc
Confidence 6999999753 12233 36799999864
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.87 E-value=3.1e-22 Score=155.46 Aligned_cols=90 Identities=78% Similarity=1.260 Sum_probs=84.9
Q ss_pred CcCccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcEEEEEEeecC
Q 017264 173 KYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (374)
Q Consensus 173 ~~r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 252 (374)
++||+||||.+.|+|+|+++|+.++++.|+|++++|+|.+...++..|.++++||++|+|++|++++.+++|+|+|+|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 56999999999999999999999999999999999999998766778999999999999999999999999999999999
Q ss_pred CCCCCccccC
Q 017264 253 PIQWSSLEFS 262 (374)
Q Consensus 253 ~~~W~~L~~~ 262 (374)
++.|++|+++
T Consensus 82 ~~~W~~L~~~ 91 (92)
T 2xcm_C 82 IITWASLEHG 91 (92)
T ss_dssp SCCCSCSBTT
T ss_pred CCcchhcccC
Confidence 8899999864
No 4
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.86 E-value=3.7e-22 Score=164.70 Aligned_cols=91 Identities=26% Similarity=0.485 Sum_probs=85.0
Q ss_pred CcCcccccc-CCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCC------------eeeeccccccccccCceEEEE
Q 017264 173 KYRHEFYQK-PEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE------------AYHFQPRLFGKIIPAKCRYEV 239 (374)
Q Consensus 173 ~~r~~W~Qt-~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~------------~y~~~~~L~~~I~p~~s~~~v 239 (374)
.+||+|||| .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.++++||++|+|++|+|+|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v 98 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF 98 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE
Confidence 579999999 9999999999999999999999999999999876654 799999999999999999999
Q ss_pred cCcEEEEEEeecCCCCCCccccCC
Q 017264 240 LSTKVEIRLAKAEPIQWSSLEFSK 263 (374)
Q Consensus 240 ~~~kiei~L~K~~~~~W~~L~~~~ 263 (374)
.+++|+|+|+|+++..|++|++..
T Consensus 99 ~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 99 TASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp CSSEEEEEEEESSSCCCSCSBCCC
T ss_pred eCCEEEEEEEECCCCccccccccC
Confidence 999999999999989999999753
No 5
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.6e-21 Score=160.38 Aligned_cols=89 Identities=20% Similarity=0.244 Sum_probs=83.2
Q ss_pred cCccccccCCeEEEEEEeCCC---CCCceEEEEeeeEEEEEEEcCCCCeeeecc-ccccccccCceEEEEcCcEEEEEEe
Q 017264 174 YRHEFYQKPEEVVVTVFAKGI---PAKNVTVDFGEQILSVSIDVPGEEAYHFQP-RLFGKIIPAKCRYEVLSTKVEIRLA 249 (374)
Q Consensus 174 ~r~~W~Qt~~~V~i~i~~k~~---~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~p~~s~~~v~~~kiei~L~ 249 (374)
.||+||||.+.|+|+|+++++ .++++.|+|++++|+|.+...+|..|.|++ +||++|+|++|+|+|.+++|+|+|+
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L~ 100 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCR 100 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEEEE
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEEEE
Confidence 489999999999999999998 789999999999999999877788899999 5999999999999999999999999
Q ss_pred ecCCC-CCCccccC
Q 017264 250 KAEPI-QWSSLEFS 262 (374)
Q Consensus 250 K~~~~-~W~~L~~~ 262 (374)
|+++. .|++|+..
T Consensus 101 K~~~~~~W~~L~~~ 114 (127)
T 1x5m_A 101 KKVENTRWDYLTQV 114 (127)
T ss_dssp CSSSSCCCSSSBHH
T ss_pred ECCCCCCCCccccc
Confidence 99874 99999965
No 6
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.5e-22 Score=167.72 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=84.8
Q ss_pred cCccccccCCe-------EEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC------CCeeeeccccccccccCceEEEEc
Q 017264 174 YRHEFYQKPEE-------VVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG------EEAYHFQPRLFGKIIPAKCRYEVL 240 (374)
Q Consensus 174 ~r~~W~Qt~~~-------V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~------~~~y~~~~~L~~~I~p~~s~~~v~ 240 (374)
.+|.||||.+. |+|+|+++++ .++.|+|++++|+|++...+ +..|.++++||++|+|++|++++.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~v~ 84 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHKVA 84 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEEEC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEEEC
Confidence 37999999987 9999999986 59999999999999876543 468999999999999999999999
Q ss_pred CcE-EEEEEeecC--CCCCCccccCCCccCCcccCCCCCCCCCCCCCCCCCCCCCCchhHHHHH
Q 017264 241 STK-VEIRLAKAE--PIQWSSLEFSKGAVVPQRVNPPSVSGSPRPTYPSSKPTRVDWDKLEAQV 301 (374)
Q Consensus 241 ~~k-iei~L~K~~--~~~W~~L~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~dWdk~~~e~ 301 (374)
+++ |+|+|+|++ +..|++|++.. .++.| .++|||+|.+|+
T Consensus 85 ~~~~vei~L~K~~~~~~~W~rL~k~~----------------~K~~~-----lk~D~dkw~dEd 127 (134)
T 2cg9_X 85 NGQHYFLKLYKKDLESEYWPRLTKEK----------------VKYPY-----IKTDFDKWVDAD 127 (134)
T ss_dssp CC--CEEEEEECSSSSCCCSCSSSSC----------------CCCSS-----EEECTTTCCCSS
T ss_pred CCEEEEEEEEECCCCCCCCCceecCC----------------CccCc-----ccCCchhcCCcc
Confidence 999 999999998 47999999753 12223 367999999653
No 7
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.83 E-value=7.6e-21 Score=153.59 Aligned_cols=93 Identities=35% Similarity=0.660 Sum_probs=86.6
Q ss_pred CCcCccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcEEEEEEeec
Q 017264 172 PKYRHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKA 251 (374)
Q Consensus 172 ~~~r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~ 251 (374)
+.+||+||||.+.|+|+|+++|+.++++.|+|++++|+|.+...++..|.++++||++|+|++|++++.+++|+|+|+|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 46799999999999999999999999999999999999999877778899999999999999999999999999999999
Q ss_pred CCCCCCccccCCC
Q 017264 252 EPIQWSSLEFSKG 264 (374)
Q Consensus 252 ~~~~W~~L~~~~~ 264 (374)
++..|++|++...
T Consensus 88 ~~~~W~~L~~~~~ 100 (114)
T 1rl1_A 88 EAVRWEKLEGQGD 100 (114)
T ss_dssp SCCCCSSSBTTC-
T ss_pred CCCcCccccccCC
Confidence 9899999997643
No 8
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.83 E-value=1.7e-19 Score=147.83 Aligned_cols=112 Identities=27% Similarity=0.476 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
++.+.++|+.+++.|+|++|+..|+++|+++|.++.+++++|.||.++|++++|+.+|++++.++|++..+|+++|.+|.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 92 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLV 92 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
.+|++++|+.+|+++++++|++..+...++.|
T Consensus 93 ~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 93 AMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 99999999999999999999999998888776
No 9
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.79 E-value=1.8e-19 Score=148.82 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=74.7
Q ss_pred cCccccccCCeEEEEEEe-CCCCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcEEEEEEeecC
Q 017264 174 YRHEFYQKPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTKVEIRLAKAE 252 (374)
Q Consensus 174 ~r~~W~Qt~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L~K~~ 252 (374)
.+|.|+||.+.|+|+|++ +|++.+++.|+|++++|+|.+. |.+ .+.++||++|+|++|+|++.+++|+|+|+|+.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VIDGELLHEVDVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEEEEBSSCEEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEccccccccccccCEEEEeCCEEEEEEEECC
Confidence 379999999999999998 6888999999999999999984 545 78889999999999999999999999999996
Q ss_pred CCCCCccccC
Q 017264 253 PIQWSSLEFS 262 (374)
Q Consensus 253 ~~~W~~L~~~ 262 (374)
...|++|...
T Consensus 81 ~~~W~~L~~~ 90 (131)
T 2o30_A 81 NEWWDSLLVG 90 (131)
T ss_dssp CCCCSCSBC-
T ss_pred CCCCccccCC
Confidence 6789999974
No 10
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=1.3e-18 Score=147.78 Aligned_cols=120 Identities=20% Similarity=0.147 Sum_probs=110.7
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHccCHHHHHHHHHHHHHh---
Q 017264 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAE-----LFADRAQASIKLQNFTEAVADANRAIEL--- 65 (374)
Q Consensus 1 ma~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~-------~~~-----~~~~ra~~~~~l~~~~~Al~~~~~al~l--- 65 (374)
|+..+++.|+.++..|+|++|+..|++||+++|. +.. +|.++|.|+.++|+|++|+.+|++||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678899999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 66 ----EPSMSKAY----WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 66 ----~p~~~~a~----~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|++..+| +++|.+|..+|+|++|+.+|+++++++|++..+...+..+.+.+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999988777777776666554
No 11
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.76 E-value=8.6e-20 Score=111.70 Aligned_cols=32 Identities=34% Similarity=0.688 Sum_probs=29.6
Q ss_pred chHHHHHHHHHHhcCCCHHHHHHhhhhhhhcC
Q 017264 312 GDAALNKFFQEIYADADEDTRRAMKKSFVESN 343 (374)
Q Consensus 312 ~~~~~~~~f~~iY~~~d~d~kram~Ks~~eS~ 343 (374)
++++||+|||+||++|||||||||||||+|||
T Consensus 4 p~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 4 SSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp -CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 45679999999999999999999999999997
No 12
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.75 E-value=1.4e-17 Score=141.21 Aligned_cols=120 Identities=23% Similarity=0.312 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI------------------SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~------------------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al 63 (374)
+..++..|+.++..|+|++|+..|.++|.+ +|.+..+|+++|.||.++|+|++|+.+|.+++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 467899999999999999999999999999 77778999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHHHHhhh
Q 017264 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEERIAEET 121 (374)
Q Consensus 64 ~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~-~~~~~~~~~~~~l~~~~ 121 (374)
.++|.++.+|+++|.+|+.+|+|++|+.+|++++.++|++. .+...+..|..++....
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 78889999998887763
No 13
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.2e-17 Score=133.64 Aligned_cols=116 Identities=31% Similarity=0.460 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
++.++..|..++..|+|++|+..|.+++..+|.++.+++++|.||.++|++++|+.+|++++.++|++..+++++|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcC------CCChhHHHHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLA------PGDSRFTNLIKECEERI 117 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~------p~~~~~~~~~~~~~~~l 117 (374)
.+|++++|+.+|+++++++ |.+..+...+..+..++
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999999999 99999999998887654
No 14
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.75 E-value=6.8e-17 Score=137.19 Aligned_cols=120 Identities=27% Similarity=0.383 Sum_probs=113.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|++|+.+|.++|.++|.++.+++++|.||..+|+|++|+.+|++++.++|++..+|+++|.+|+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChh--HHHHHHHHHHHHHhhh
Q 017264 82 KLEEYETAKVALEKGASLAPGDSR--FTNLIKECEERIAEET 121 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~--~~~~~~~~~~~l~~~~ 121 (374)
.+|++++|+.+|+++++++|++.. +...+..+..++....
T Consensus 91 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 91 DMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 6777788888887764
No 15
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.74 E-value=9.1e-18 Score=137.32 Aligned_cols=89 Identities=18% Similarity=0.214 Sum_probs=81.4
Q ss_pred CccccccCCeEEEEEEeC-CC-CCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcE-EEEEEeec
Q 017264 175 RHEFYQKPEEVVVTVFAK-GI-PAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAKA 251 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k-~~-~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K~ 251 (374)
+|.|+||.+.|+|+|.++ ++ +.+++.|+|++++|+|.+...+|..+.++++||++|+|++|+|++.+++ |+|+|+|+
T Consensus 21 ~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 21 NYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKV 100 (124)
T ss_dssp SCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECBS
T ss_pred cEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEEEC
Confidence 799999999999999986 77 7899999999999999997655666789999999999999999999987 99999999
Q ss_pred CCCCCCccccCC
Q 017264 252 EPIQWSSLEFSK 263 (374)
Q Consensus 252 ~~~~W~~L~~~~ 263 (374)
+...|++|...+
T Consensus 101 ~~~~W~~L~~~~ 112 (124)
T 1wgv_A 101 GEYWWNAILEGE 112 (124)
T ss_dssp SSCCCSCSBTTS
T ss_pred CCCCCcCcccCC
Confidence 889999999754
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.72 E-value=8.3e-17 Score=131.69 Aligned_cols=111 Identities=23% Similarity=0.288 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~-------~~a~~ 74 (374)
|..+.+.|+.+++.|+|++|+.+|++||+++|.++.+|.++|.||.++|+|++|+.+|.+++.++|.+ +.+|+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999998754 46899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
++|.++..+|+|++|+.+|++++...|+ +.....+..+
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 9999999999999999999999999885 5555444444
No 17
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.72 E-value=1.7e-16 Score=134.38 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.+++.++|.++.+|+++|.||..+|+|++|+..|++++.++|+++.+|+++|.+|..
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~ 116 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR 116 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCh
Q 017264 83 LEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
+|++++|+.+|++++++.|+..
T Consensus 117 lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 117 LKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp TTCHHHHHHHHHHHHHHCCCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999765
No 18
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.70 E-value=3.8e-16 Score=131.28 Aligned_cols=118 Identities=11% Similarity=0.135 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.+++..+|.++.+++.+|.||..+|++++|+..|++++.++|+++.+++.+|.+|..
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~ 101 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ 101 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|++++|+.+|+++++++|+++....+..++...+...
T Consensus 102 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 139 (148)
T 2vgx_A 102 XGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAI 139 (148)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999998888888888877765
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.70 E-value=4.6e-16 Score=129.16 Aligned_cols=118 Identities=10% Similarity=0.134 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+.+|.+++..+|.++.+++.+|.||..+|++++|+..|++++.++|+++.+++.+|.+|..
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 98 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ 98 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|++++|+.+|++++.++|+++.......++...+...
T Consensus 99 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 99 LGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888888777665
No 20
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.67 E-value=9.7e-16 Score=128.89 Aligned_cols=111 Identities=18% Similarity=0.113 Sum_probs=103.5
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.++..|..++..|+|++|+.+|.++|+++|+++.+++.+|.||..+|++++|+..|+++++++|+++.+++++|.+|+.+
T Consensus 33 ~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 33 KGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHH-HHHHHhcCCCChhHHHHHHHHH
Q 017264 84 EEYETAKVA-LEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 84 g~~~eA~~~-~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
|++.+|..+ ++++++++|+++.+.....++.
T Consensus 113 ~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 113 DVTDGRAKYWVERAAKLFPGSPAVYKLKEQLL 144 (150)
T ss_dssp CSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 999887765 5899999999998877666654
No 21
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.65 E-value=2e-16 Score=134.18 Aligned_cols=85 Identities=24% Similarity=0.371 Sum_probs=76.4
Q ss_pred cCccccccCCeEEEEEEeC-CCCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCcE-EEEEEeec
Q 017264 174 YRHEFYQKPEEVVVTVFAK-GIPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLSTK-VEIRLAKA 251 (374)
Q Consensus 174 ~r~~W~Qt~~~V~i~i~~k-~~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~k-iei~L~K~ 251 (374)
.+|.|+||.+.|+|+|.++ ++..++|.|+|++++|+|.+. |.. .++++||++|+|++|+|+|.+++ |+|+|+|+
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K~ 89 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GRE-ILKGKLFDSTIADEGTWTLEDRKMVRIVLTKT 89 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEE-EEEEEBSSCBCGGGCEEEEECCCEEEEEEEBS
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEE-EEeeccccccCccccEEEEcCCcEEEEEEEEc
Confidence 4899999999999999985 788899999999999999985 444 48889999999999999999987 99999999
Q ss_pred CC---CCCCccccC
Q 017264 252 EP---IQWSSLEFS 262 (374)
Q Consensus 252 ~~---~~W~~L~~~ 262 (374)
+. ..|++|...
T Consensus 90 ~~~~~~~W~~L~k~ 103 (157)
T 2rh0_A 90 KRDAANCWTSLLES 103 (157)
T ss_dssp SCSTTCCCSEEETT
T ss_pred CCCcCCcChhhhcC
Confidence 85 799999964
No 22
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.65 E-value=3.6e-15 Score=121.56 Aligned_cols=119 Identities=24% Similarity=0.367 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|++|+..|.+++..+|.++.+++.+|.||..+|++++|+.++.+++.++|++..+++.+|.+++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCC-----ChhHHHHHHHHHHHHHhh
Q 017264 82 KLEEYETAKVALEKGASLAPG-----DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~-----~~~~~~~~~~~~~~l~~~ 120 (374)
.+|++++|+.+|++++.++|+ +..+...+..+..+....
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 778888888888776554
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.65 E-value=5.4e-16 Score=128.03 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=77.8
Q ss_pred CccccccCCeEEEEEEeC-C--CCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCc-EEEEEEee
Q 017264 175 RHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLAK 250 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~-kiei~L~K 250 (374)
+|.|+||.+.|+|+|.++ + +..+++.|+|++++|+|.+. |..+.++++||++|+|++|+|++.++ .|+|+|+|
T Consensus 9 ~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K 85 (131)
T 1wfi_A 9 NYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEK 85 (131)
T ss_dssp SSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEEB
T ss_pred cEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEEecccccccccccCEEEEcCCCEEEEEEEE
Confidence 799999999999999987 5 78899999999999999985 44577899999999999999999987 59999999
Q ss_pred cCC-CCCCccccCC
Q 017264 251 AEP-IQWSSLEFSK 263 (374)
Q Consensus 251 ~~~-~~W~~L~~~~ 263 (374)
++. ..|++|...+
T Consensus 86 ~~~~~~W~~L~~~~ 99 (131)
T 1wfi_A 86 INKMEWWNRLVTSD 99 (131)
T ss_dssp SSSCCCCSCSBSSC
T ss_pred CCCCCCChhhhcCC
Confidence 987 6999999754
No 24
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.63 E-value=9.6e-15 Score=127.71 Aligned_cols=120 Identities=23% Similarity=0.306 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----------------ELFADRAQASIKLQNFTEAVADANRAIEL 65 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~----------------~~~~~ra~~~~~l~~~~~Al~~~~~al~l 65 (374)
+..++..|..++..|+|++|+.+|.+++.+.|.++ .++.++|.||..+|+|++|+.+|.+++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhhh
Q 017264 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEET 121 (374)
Q Consensus 66 ~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~~ 121 (374)
+|.+..+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++...
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR 173 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888764
No 25
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.62 E-value=1.1e-15 Score=124.26 Aligned_cols=87 Identities=18% Similarity=0.245 Sum_probs=77.8
Q ss_pred CccccccCCeEEEEEEeC-C--CCCCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCceEEEEcCc-EEEEEEee
Q 017264 175 RHEFYQKPEEVVVTVFAK-G--IPAKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAKCRYEVLST-KVEIRLAK 250 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k-~--~~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~s~~~v~~~-kiei~L~K 250 (374)
+|.|+||.+.|+|+|.++ + +..++|.|+|++++|+|.++ |..|.++++||++|+|++|+|++.+. +|+|+|.|
T Consensus 18 ~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~K 94 (121)
T 3qor_A 18 NYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIIDGELYNEVKVEESSWLIADGAVVTVHLEK 94 (121)
T ss_dssp SCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEEB
T ss_pred CEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEeccccccccccccEEEEcCCCEEEEEEEE
Confidence 799999999999999886 4 78899999999999999886 44678899999999999999999986 89999999
Q ss_pred cCC-CCCCccccCCC
Q 017264 251 AEP-IQWSSLEFSKG 264 (374)
Q Consensus 251 ~~~-~~W~~L~~~~~ 264 (374)
.+. ..|++|...+.
T Consensus 95 ~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 95 INKMEWWSRLVSSDP 109 (121)
T ss_dssp SSSSCCCSCSBTTSC
T ss_pred CCCCCCChhhhcCCC
Confidence 986 69999987543
No 26
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=2.2e-14 Score=112.57 Aligned_cols=114 Identities=26% Similarity=0.440 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|++|+..|.+++..+|.++.++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
.+|++++|+.+|+++++++|++..+...+..+..
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999988887777653
No 27
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.62 E-value=4.9e-15 Score=120.05 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.++..|..++..|++++|+..|.+++..+|+++.+++.+|.+|..+|++++|+..|++++.++|++..+++.+|.+|..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChh
Q 017264 84 EEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~ 105 (374)
|++++|+.+|+++++++|++..
T Consensus 99 g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 99 HNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred CCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999997653
No 28
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=1e-14 Score=129.12 Aligned_cols=116 Identities=15% Similarity=0.046 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHccCHHHHHHHHHHHHHh
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFAD----------------RAQASIKLQNFTEAVADANRAIEL 65 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~----------------ra~~~~~l~~~~~Al~~~~~al~l 65 (374)
++.++.+|..++..|+|++|+..|.+++..+|+++.+++. +|.+|.++|++++|+..|++++.+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 66 ~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
+|++..+++.+|.+++.+|++++|+.+|+++++++|++......++.+....
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888775433
No 29
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.61 E-value=1.6e-14 Score=137.81 Aligned_cols=119 Identities=21% Similarity=0.360 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---------------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~ 66 (374)
+..+...|+.++..|+|++|+..|.+||.++|.+ ..+++++|.||.++|+|++|+.+|++++.++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3467899999999999999999999999999999 6999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
|++..+++++|.+|+.+|+|++|+.+|+++++++|++..+...++.+...+++.
T Consensus 227 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 280 (336)
T 1p5q_A 227 SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQ 280 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888877765554
No 30
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.61 E-value=1.3e-14 Score=116.80 Aligned_cols=115 Identities=28% Similarity=0.419 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..+++++.++|.+..+++.+|.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
+|++++|+.+|++++.++|.+..+...++.+...+
T Consensus 97 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 97 MKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 99999999999999999999998888888876654
No 31
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.60 E-value=1.1e-14 Score=144.76 Aligned_cols=119 Identities=23% Similarity=0.331 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------------AELFADRAQASIKLQNFTEAVADANRAIELE 66 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---------------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~ 66 (374)
+..++.+|+.++..|+|++|+..|.+||.++|.+ ..+|+++|.||+++++|++|+.+|.+|+.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999998 7999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
|++..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+..++++.
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888888888776654
No 32
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.60 E-value=2.1e-14 Score=115.70 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=104.9
Q ss_pred ChHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHH
Q 017264 1 MATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA---ELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYW 74 (374)
Q Consensus 1 ma~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~---~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~---~~a~~ 74 (374)
|++.++..|..++..|+|++|+..|.+++...|++. .+++.+|.+|..+|++++|+..|.+++.++|++ +.+++
T Consensus 1 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 456788999999999999999999999999999988 799999999999999999999999999999999 89999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
.+|.+++.+|++++|+..|++++...|++.........+..
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999998876665555443
No 33
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.59 E-value=6.6e-14 Score=111.68 Aligned_cols=117 Identities=33% Similarity=0.473 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|+.|+.+|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
+|++++|+.+|+++++++|++......++.+...+++
T Consensus 93 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 93 LNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred hCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988888888776654
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=4.3e-14 Score=116.01 Aligned_cols=113 Identities=27% Similarity=0.424 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~ 78 (374)
+..++..|..++..|+|++|+.+|.+++..+|++ ..+++.+|.+|..++++++|+..+.+++.++|.+..+++.+|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 4568899999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 79 ACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 79 ~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
+++.+|++++|+.+|++++.++|++..+...+..+.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999998887777664
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.57 E-value=1.4e-13 Score=115.09 Aligned_cols=113 Identities=32% Similarity=0.511 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|+.|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+++
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
.+|++++|+.+|++++.++|.+......+..+.
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999988776666553
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.57 E-value=3.5e-14 Score=148.79 Aligned_cols=113 Identities=18% Similarity=0.236 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
+.+.+.|+.+...|+|++|+.+|.+||+++|+++.+++++|.+|.++|++++|+..|++|++++|+++.+|+++|.+|..
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~ 89 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE 89 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
+|++++|+.+|+++++++|++..+...++.+..
T Consensus 90 ~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 90 MQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 555555555555555555555554444444443
No 37
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.56 E-value=1e-13 Score=110.71 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM-------SKAYW 74 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~-------~~a~~ 74 (374)
+..+...|..++..|+|++|+.+|.+++..+|.++.+++.+|.+|..+|++++|+..+.+++.+.|.+ ..+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999998876 89999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
++|.+++.+|++++|+.+|++++.+.| +......+..+...+...
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 688888888888877654
No 38
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.56 E-value=3e-14 Score=137.93 Aligned_cols=119 Identities=24% Similarity=0.442 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE----------------ISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~----------------~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l 65 (374)
+..+...|+.++..|+|++|+..|.+||+ .+|.+..+|.++|.||+++++|++|+.+|++|+.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999 77888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 66 ~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|++..+++++|.+|+.+|+|++|+.+|+++++++|++..+...+..+...++..
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998887765
No 39
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.55 E-value=5.9e-14 Score=125.00 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.++|..+|.++.+++.+|.+|.++|++++|+..+++++.++|++..+++.+|.++..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 35667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred h-----------cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 83 L-----------EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 83 l-----------g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
+ |++++|+.+|+++++++|++..+...++.+...+
T Consensus 86 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 86 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALL 131 (217)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 7 7777777777777777777776666666655443
No 40
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.55 E-value=6.1e-15 Score=123.96 Aligned_cols=114 Identities=11% Similarity=-0.095 Sum_probs=103.7
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCH
Q 017264 7 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEY 86 (374)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~ 86 (374)
..|..+...|++++|+..|.+++..+|.++..++.+|.+|+++|+|++|+..|++++.++|+++.+|+.+|.+|..+|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 35788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 87 ETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 87 ~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
++|+.+|+++++++|++..+...++.+...+++.
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 9999999999999999999988888887665543
No 41
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.53 E-value=2.7e-13 Score=120.53 Aligned_cols=111 Identities=16% Similarity=0.304 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p-~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
+..++..|..++..|+|++|+..|.+++..+| .+..+++.+|.||..+|++++|+.+|.+++.++|.+..+++.+|.+|
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 35789999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
..+|++++|+.+|+++++++|++..+...+..
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 99999999999999999999999955333333
No 42
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.53 E-value=5.3e-13 Score=105.45 Aligned_cols=114 Identities=21% Similarity=0.384 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+.+|.+++...|.+..++..+|.+|...|++++|+..+++++.+.|.+..+++.+|.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
+|++++|+.+|+++++++|++..+...+..+...
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 90 QGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 9999999999999999999999888888777554
No 43
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.52 E-value=1.2e-13 Score=144.62 Aligned_cols=116 Identities=19% Similarity=0.202 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..+.+.|..++..|+|++|+.+|.+||+++|+++.+|+++|.+|..+|++++|+..|++|++++|++..+|+++|.+|.
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHK 122 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
.+|++++|+.+|+++++++|++..+...++.+...+
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~ 158 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIV 158 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhc
Confidence 999999999999999999999999888887776543
No 44
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.52 E-value=2.8e-13 Score=120.57 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHhCCCCHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-----------QNFTEAVADANRAIELEPSMSK 71 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l-----------~~~~~Al~~~~~al~l~p~~~~ 71 (374)
..++..|..++..|++++|+..|.+++.++|+++.+++.+|.+|..+ |++++|+..+++++.++|++..
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~ 119 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAP 119 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHH
Confidence 45778899999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 72 a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+++.+|.++..+|++++|+.+|+++++++ ++..+...++.+...+++.
T Consensus 120 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~ 167 (217)
T 2pl2_A 120 LHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRL 167 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCH
Confidence 99999999999999999999999999998 8888888777776665544
No 45
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.51 E-value=2.7e-14 Score=136.44 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-----------------ELFADRAQASIKLQNFTEAVADANRAIE 64 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~-----------------~~~~~ra~~~~~l~~~~~Al~~~~~al~ 64 (374)
+..++..|+.++..|+|++|+..|.+||.+.|.+. .+|+++|.||+++++|++|+.+|.+++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999877 3899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 65 LEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 65 l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
++|++..+|+++|.+|+.+|+|++|+.+|+++++++|++..+...+..+......
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~ 313 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKA 313 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988888887555443
No 46
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=1.3e-13 Score=134.07 Aligned_cols=118 Identities=13% Similarity=0.019 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~-~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
..+...|..+...|+|++|+..|+++|.++|.+..+|++||.+|..+|+ +++|+.+|++++.++|++..+|+.+|.++.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~ 177 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE 177 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4677889999999999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
.+|++++|+.+|+++++++|++..+...++.+...++..
T Consensus 178 ~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 178 WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 216 (382)
T ss_dssp HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCCh
Confidence 999999999999999999999999998888888777654
No 47
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.50 E-value=1.1e-13 Score=117.27 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=97.0
Q ss_pred HHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 12 AFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNF----------TEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 12 ~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~----------~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
.-+.+.|++|+..|.+++.++|+++.+|+++|.++..++++ ++|+..|++||+++|++..+|+++|.+|.
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 34567799999999999999999999999999999999875 59999999999999999999999999999
Q ss_pred Hhc-----------CHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 82 KLE-----------EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 82 ~lg-----------~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
.+| +|++|+.+|+++++++|++......+..+.+...
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHh
Confidence 885 8999999999999999999988887777665443
No 48
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.50 E-value=6.4e-13 Score=113.94 Aligned_cols=113 Identities=15% Similarity=0.180 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..+++.|..++..|+|++|+..|+++|+++|+++.++..+|.+|.++|++++|+..+.+++...|....+++.+|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999998888888877777766655555554444444
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
..++++.|...+.+++.++|.+......++.+.
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~ 117 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVY 117 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 444444444444444444444444444444333
No 49
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.49 E-value=1.8e-13 Score=132.99 Aligned_cols=115 Identities=7% Similarity=-0.031 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHhccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~-y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
+..+..+|..+...|+ |++|+..|+++|.++|.+..+|++||.+|..+|++++|+.+|+++|.++|++..+|+.+|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 3567899999999996 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
..+|++++|+.+|+++++++|++..+...++.+...
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888665
No 50
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.49 E-value=4.1e-13 Score=124.62 Aligned_cols=102 Identities=28% Similarity=0.416 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|+.++..|+|++|+.+|.+++..+|.++.+++++|.+|.++|++++|+.++++++.++|++..+++++|.+|+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCC
Q 017264 82 KLEEYETAKVALEKGASLAPGD 103 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~ 103 (374)
.+|++++|+..|+++++++|++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999876
No 51
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=2.8e-13 Score=105.25 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~--~~~a~~~lg~~~ 80 (374)
..+...|..++..|+|++|+.+|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|. +..+++.+|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHh-cCHHHHHHHHHHHHhcCCCCh
Q 017264 81 MKL-EEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 81 ~~l-g~~~eA~~~~~~a~~l~p~~~ 104 (374)
..+ |++++|+.+|++++...|.+.
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999 999999999999999998764
No 52
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.48 E-value=5.8e-14 Score=112.37 Aligned_cols=100 Identities=17% Similarity=0.102 Sum_probs=89.6
Q ss_pred hccCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHH
Q 017264 14 IDDYFELAYDLYSQAIEI---SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAK 90 (374)
Q Consensus 14 ~~~~y~~Al~~y~~aL~~---~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~ 90 (374)
..|+|++|+.+|.++|.+ +|.+..+++++|.+|..+|+|++|+..|++++.++|+++.+++.+|.+++.+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 68889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHH
Q 017264 91 VALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
.+|++++.+.|+++.+......+
T Consensus 82 ~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHH
Confidence 99999999999998876655444
No 53
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.47 E-value=9.3e-13 Score=117.05 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-------HHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-------KAYWRK 76 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~-------~a~~~l 76 (374)
.++..|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+++++.++|++. .+|+.+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 123 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKE 123 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 4667999999999999999999999999999999999999999999999999999999999999998 679999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCC--ChhHHHHHHHHHHHHHhh
Q 017264 77 ATACMKLEEYETAKVALEKGASLAPG--DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 77 g~~~~~lg~~~eA~~~~~~a~~l~p~--~~~~~~~~~~~~~~l~~~ 120 (374)
|.+++.+|++++|+.+|+++++++|+ +......++.+...++..
T Consensus 124 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 124 GQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 888888888877665554
No 54
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.46 E-value=2e-12 Score=110.40 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA-SIKLQNF--TEAVADANRAIELEPSMSKAYWRKATA 79 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~-~~~l~~~--~~Al~~~~~al~l~p~~~~a~~~lg~~ 79 (374)
..+...|..++..|+|++|+.+|.+++..+|.++.++..+|.+ |...|++ ++|+..+.+++.++|++..+++.+|.+
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999 8899999 999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
++.+|++++|+.+|++++.++|++......+..+..
T Consensus 125 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 125 AFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 999999999999999999999998765555554443
No 55
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.46 E-value=2.2e-12 Score=114.02 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=92.8
Q ss_pred HHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-----
Q 017264 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----- 82 (374)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~----- 82 (374)
.|..++..|+|++|+..|.++|+++|+++.+++.+|.+|..+|++++|+..|++++.++|+++.+++.+|.+|+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999888888777644
Q ss_pred ------------------------------hcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 83 ------------------------------LEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 83 ------------------------------lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
+|+|++|+.+|+++++++|+.. ....+.++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i 199 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKI 199 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHH
Confidence 3568899999999999999743 34444444
No 56
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.42 E-value=6.4e-12 Score=107.64 Aligned_cols=118 Identities=22% Similarity=0.166 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+..+.+++...|.+..++..+|.++...++++.|+..+.+++.++|.+..+++.+|.+|..
T Consensus 40 ~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~ 119 (184)
T 3vtx_A 40 ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS 119 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 45677888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|++++|+.+|+++++++|.+..+...++.+...+++.
T Consensus 120 ~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 120 MGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCH
Confidence 88888888888888888888888777777776665544
No 57
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=9.1e-12 Score=108.98 Aligned_cols=102 Identities=15% Similarity=0.085 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH------------
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS------------ 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~------------ 70 (374)
..+...|..++..|+|++|+..|.+++..+|.++.+++++|.+|..+|++++|+.+|.+++.+.|.+.
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 117 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFK 117 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccC
Confidence 35667777888888888888888888888888888888888888888888888888888888776655
Q ss_pred ----HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 71 ----KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 71 ----~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
.+++.+|.+++.+|++++|+.+|+++++++|++.
T Consensus 118 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 118 LFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp EEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred ccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 7778888888888888888888888888877654
No 58
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.41 E-value=5e-13 Score=133.65 Aligned_cols=114 Identities=31% Similarity=0.505 Sum_probs=107.4
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|+|++|+.+|++|++++|.++.++.++|.+|.++|++++|+.++++|++++|+++.+++++|.+|+.+
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
|++++|+.+|+++++++|++......++.+...+
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999988888884433
No 59
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.40 E-value=2.1e-13 Score=115.27 Aligned_cols=104 Identities=11% Similarity=-0.081 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017264 17 YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKG 96 (374)
Q Consensus 17 ~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 96 (374)
++-.+-..|.+++.++|+++.+++.+|.+++++|+|++|+..|++++.++|.++.+|+.+|.+|+.+|+|++|+.+|+++
T Consensus 17 ~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33344456888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCChhHHHHHHHHHHHHHhh
Q 017264 97 ASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 97 ~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
++++|+++.....++.|...+++.
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCH
Confidence 999999999999999998877665
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=4.4e-12 Score=113.25 Aligned_cols=111 Identities=32% Similarity=0.470 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+..|.+++..+|.++.++..+|.+|..+|++++|+..+.+++.++|++..+++.+|.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 219 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 219 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcC------CCChhHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLA------PGDSRFTNLIKEC 113 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~------p~~~~~~~~~~~~ 113 (374)
+|++++|+.+|+++++++ |.+..+...+.+|
T Consensus 220 ~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 220 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999 8888877777665
No 61
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.40 E-value=9.1e-12 Score=99.19 Aligned_cols=114 Identities=21% Similarity=0.327 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.++...|++++|+..+.+++.+.|....+++.+|.+++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
.|++++|+..|.+++...|.+......++.+...
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 115 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 115 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 9999999999999999999988776666666543
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.39 E-value=1e-11 Score=112.23 Aligned_cols=111 Identities=20% Similarity=0.095 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+.+|.+++..+|.++.++..+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|+.
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 123 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY 123 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
+|++++|+.+|+++++++|++.....++..+
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 124 GGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999998655555443
No 63
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.39 E-value=4.2e-12 Score=115.42 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWR 75 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~---~~~a~~~ 75 (374)
++.++..|..++..|+|++|+..|.+++...|.+ ..+++.+|.||+++|+|++|+..|++++.+.|+ ...+++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 94 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYE 94 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHH
Confidence 4578999999999999999999999999999999 899999999999999999999999999999884 4679999
Q ss_pred HHHHHHH--------hcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 76 KATACMK--------LEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 76 lg~~~~~--------lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
+|.+++. +|++++|+..|++++...|++....
T Consensus 95 lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 95 RAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999 9999999999999999999987655
No 64
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.5e-13 Score=105.35 Aligned_cols=94 Identities=19% Similarity=0.291 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR 75 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------~~a~~~ 75 (374)
+..++..|..++..|+|++|+..|.+++..+|.++.+++++|.||..+|++++|+.++.+++.++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999998 889999
Q ss_pred HHHHHHHhcCHHHHHHHHHH
Q 017264 76 KATACMKLEEYETAKVALEK 95 (374)
Q Consensus 76 lg~~~~~lg~~~eA~~~~~~ 95 (374)
+|.++..+|+++.|+..|++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999988887766654
No 65
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=6.6e-12 Score=109.88 Aligned_cols=114 Identities=19% Similarity=0.194 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.+++ ++ ++.+++++|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|+.
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~ 83 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ 83 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 357899999999999999999999996 34 689999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCh----------------hHHHHHHHHHHHHHh
Q 017264 83 LEEYETAKVALEKGASLAPGDS----------------RFTNLIKECEERIAE 119 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~----------------~~~~~~~~~~~~l~~ 119 (374)
+|+|++|+.+|++++++.|.+. .+...++.+...+++
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 136 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE 136 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC
Confidence 9999999999999999998877 677777776655443
No 66
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.36 E-value=2.5e-11 Score=102.33 Aligned_cols=116 Identities=13% Similarity=0.145 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+.+|.+++...|.+..++..+|.+|...|++++|+..+.+++.+.|.+..+++.+|.++..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 122 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN 122 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH
Confidence 34567788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
+|++++|+.+|++++...|.+..+...++.+...++
T Consensus 123 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 123 LGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG 158 (186)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcC
Confidence 888888888888888888888777766666655443
No 67
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.36 E-value=1.4e-11 Score=97.74 Aligned_cols=101 Identities=16% Similarity=0.187 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 20 LAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 20 ~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
.|+..|.+++..+|.++.+++.+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+|..+|++++|+.+|++++.+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--ChhHHHHHHHHHHHHHhh
Q 017264 100 APG--DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 100 ~p~--~~~~~~~~~~~~~~l~~~ 120 (374)
.|. +......+..+...+...
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhccc
Confidence 874 344555555555555554
No 68
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.35 E-value=8.2e-12 Score=124.50 Aligned_cols=118 Identities=14% Similarity=0.021 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhc---------cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHh
Q 017264 3 TDLEKKAKEAFID---------DYFELAYDLYSQAIEISPNSAELFADRAQASIKL--------QNFTEAVADANRAIEL 65 (374)
Q Consensus 3 ~~l~~~g~~~~~~---------~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l--------~~~~~Al~~~~~al~l 65 (374)
..+...|..++.. |+|++|+..|.+++.++|.+..+++++|.+|..+ |++++|+..|++++.+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 3567889999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred CC---CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 66 EP---SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 66 ~p---~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+| .++.+|+++|.+|+.+|+|++|+.+|+++++++|++......++.+...+++.
T Consensus 251 ~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 251 DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRL 308 (474)
T ss_dssp CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999888888888777665
No 69
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.35 E-value=3.4e-11 Score=112.49 Aligned_cols=116 Identities=19% Similarity=0.217 Sum_probs=108.8
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE----LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~----~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
....|..++..|+|++|+..|.+++...|.+.. ++..+|.+|..+|++++|+..+.+++.++|+++.+++.+|.++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY 316 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 456699999999999999999999999999874 4667999999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
..+|++++|+.+|+++++++|++..+...+.++...+++.
T Consensus 317 ~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 317 LIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998888765
No 70
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.33 E-value=1.8e-11 Score=124.26 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..+...|..++..|+|++|+.+|.++++++|++..++.++|.+|..+|++++|+..+++++.++|++..+++.+|.+|.
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
.+|++++|+.+|+++++++|++......++.+...+
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998888877777666
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.33 E-value=1.9e-11 Score=103.12 Aligned_cols=117 Identities=13% Similarity=0.062 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+..|.+++...|.+..++..+|.+|..+|++++|+..+.+++.+.|.+..+++.+|.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ 88 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
.|++++|+.+|++++...|.+..+...++.+...++.
T Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 125 (186)
T 3as5_A 89 VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR 125 (186)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc
Confidence 9999999999999999999998877777776655443
No 72
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.32 E-value=2.4e-11 Score=114.81 Aligned_cols=118 Identities=15% Similarity=0.195 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+.+|.+++..+|.++.++..+|.+|..+|++++|+..|++++.++|.+..+++.+|.+|..
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCC-----------hhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPGD-----------SRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~-----------~~~~~~~~~~~~~l~~~ 120 (374)
+|++++|+.+|++++.+.|++ ..+...++.+...+++.
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 346 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQS 346 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCG
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCCh
Confidence 999999999999999998887 67777777777776654
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.32 E-value=6.1e-11 Score=105.11 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|++++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|.+++.+
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 138 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKL 138 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
|++++|+..|++++.+.|.+..+...++.+...++
T Consensus 139 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (243)
T 2q7f_A 139 EQPKLALPYLQRAVELNENDTEARFQFGMCLANEG 173 (243)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcC
Confidence 77777777777777777777766666655554433
No 74
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.32 E-value=3.2e-11 Score=107.60 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH---HHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---AYWR 75 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~---a~~~ 75 (374)
+..++..|..++..|+|++|+..|.+++...|.+ ..+++.+|.+|+++|++++|+..|++++.+.|++.. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 4578899999999999999999999999998886 478999999999999999999999999999998764 8999
Q ss_pred HHHHHHH------------------hcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 76 KATACMK------------------LEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 76 lg~~~~~------------------lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
+|.+++. +|++++|+..|+++++..|++....
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 9999987 5799999999999999999987544
No 75
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.32 E-value=2.4e-11 Score=112.96 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH------------------------
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD------------------------ 58 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~------------------------ 58 (374)
+.++..|..++..|++++|+..|.+++..+|+++.+++.+|.+|..+|++++|+..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLX 197 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHh
Confidence 45788999999999999999999999999999999999999999999998887544
Q ss_pred ----------HHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--hhHHHHHHHHHHHHHh
Q 017264 59 ----------ANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAE 119 (374)
Q Consensus 59 ----------~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~--~~~~~~~~~~~~~l~~ 119 (374)
+++++.++|++..+++.+|.+|...|++++|+..|.++++++|++ ...+..+..+...++.
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 555677899999999999999999999999999999999999998 6677777777766654
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=2.4e-11 Score=108.41 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHH--------------------------hCCCCHHHHHHHHHHHHHccCHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIE--------------------------ISPNSAELFADRAQASIKLQNFTEA 55 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~--------------------------~~p~~~~~~~~ra~~~~~l~~~~~A 55 (374)
+..+...|..++..|++++|+..|.+++. .+|.+..++..+|.+|..+|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 35677899999999999999999999999 6677788999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 56 VADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 56 l~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+..+++++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|++......++.+...++..
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 223 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEY 223 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999998888888877665543
No 77
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=1.9e-11 Score=115.95 Aligned_cols=116 Identities=16% Similarity=0.234 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|+|++|+..|.+++..+|.++.++..+|.+|..+|++++|+..|++++.++|++..+++.+|.+|..+
T Consensus 215 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 215 LQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCHHHHHHHHHHHHhcCCCC------------hhHHHHHHHHHHHHHh
Q 017264 84 EEYETAKVALEKGASLAPGD------------SRFTNLIKECEERIAE 119 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~------------~~~~~~~~~~~~~l~~ 119 (374)
|++++|+.+|++++++.|+. ..+...+..+...+++
T Consensus 295 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 342 (365)
T 4eqf_A 295 GAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQ 342 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCc
Confidence 77777777777777776652 3445555555554443
No 78
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.31 E-value=6.3e-12 Score=102.36 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=86.2
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhH
Q 017264 27 QAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRF 106 (374)
Q Consensus 27 ~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~ 106 (374)
++..++|..+..+.++|.+|++.|+|++|+..|.+++.++|.++.+|+.+|.+|+.+|++++|+.+|+++++++|++...
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 44557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 017264 107 TNLIKECEERIAEE 120 (374)
Q Consensus 107 ~~~~~~~~~~l~~~ 120 (374)
...++.+...++..
T Consensus 84 ~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 84 YIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHCCCH
Confidence 88888888776554
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.31 E-value=4.3e-11 Score=111.78 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
++.++..|..++..|+|++|+..|.+++..+|.++.+++.+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCC---CChhHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAP---GDSRFTNLIK 111 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p---~~~~~~~~~~ 111 (374)
.+|++++|+.+|++++.++| ++......+.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999 7776665553
No 80
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.31 E-value=4.4e-11 Score=106.02 Aligned_cols=117 Identities=15% Similarity=0.135 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+..|.+++...|.+..++..+|.+|..+|++++|+..+.+++.+.|.+..+++.+|.+++.
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN 171 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
.|++++|+.+|++++...|++..+...++.+...++.
T Consensus 172 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 208 (243)
T 2q7f_A 172 EGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKEN 208 (243)
T ss_dssp HTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccC
Confidence 9999999999999999999988888777777665444
No 81
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.31 E-value=1.5e-11 Score=122.61 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHhccCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y-~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
+..++..|..++..|+| ++|+.+|.++++++|.++.+++.+|.+|..+|++++|+..|++++.++|+ ..+++.+|.+|
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~ 180 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHH
Confidence 45678999999999999 99999999999999999999999999999999999999999999999999 79999999999
Q ss_pred HHh---------cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 81 MKL---------EEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 81 ~~l---------g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
..+ |++++|+.+|+++++++|++......++.+...+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999 9999999999999999999998888887777655
No 82
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.31 E-value=5.6e-12 Score=131.37 Aligned_cols=117 Identities=9% Similarity=-0.083 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|+++++.+|++..+++++|.+|..+|++++|+.+|++|++++|++..+++++|.+|..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|+|++ +.+|+++++++|++..+...++.+...+++.
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDR 550 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCH
Confidence 999999 9999999999999998888888887766554
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.30 E-value=2.5e-11 Score=109.89 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+++++.++|.+..+++.+|..++.
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 44677788888888888888888888888888888888888888888888888888888888888888888888855555
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
.+++++|+.+|+++++++|++.....+++.+...++
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 568888888888888888887777666666666554
No 84
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.29 E-value=7.2e-11 Score=103.04 Aligned_cols=115 Identities=12% Similarity=0.034 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 88 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCG 88 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 45677888899999999999999999999998888889999999999999999999999999999888889999999999
Q ss_pred h-cCHHHHHHHHHHHHh--cCCCChhHHHHHHHHHHHH
Q 017264 83 L-EEYETAKVALEKGAS--LAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 83 l-g~~~eA~~~~~~a~~--l~p~~~~~~~~~~~~~~~l 117 (374)
+ |++++|+.+|++++. ..|.+..+...++.+...+
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 126 (225)
T 2vq2_A 89 RLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQ 126 (225)
T ss_dssp TTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHc
Confidence 9 999999999999888 4555555555566555443
No 85
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.29 E-value=4.2e-11 Score=108.71 Aligned_cols=116 Identities=18% Similarity=0.085 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHhCCCCH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIK--------LQNFTEAVADANRAIELEPSMS 70 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---~~~~~~ra~~~~~--------l~~~~~Al~~~~~al~l~p~~~ 70 (374)
...++..|..++..|+|++|+..|.+++...|.+ ..+++.+|.||.. +|++++|+..|++++.+.|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 3567899999999999999999999999998854 6789999999999 9999999999999999999876
Q ss_pred HHH-----------------HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh---hHHHHHHHHHHHH
Q 017264 71 KAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERI 117 (374)
Q Consensus 71 ~a~-----------------~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~---~~~~~~~~~~~~l 117 (374)
.+. +.+|.+|+.+|+|++|+.+|++++...|++. .+..+++.+...+
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 555 8999999999999999999999999999854 4666666666555
No 86
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.29 E-value=4.9e-12 Score=105.90 Aligned_cols=99 Identities=17% Similarity=0.131 Sum_probs=92.2
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017264 22 YDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 22 l~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p 101 (374)
-..|.+++.++|.+..+++.+|.+++..|+|++|+..|.+++.++|.++.+|+.+|.+|..+|+|++|+.+|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhh
Q 017264 102 GDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~l~~~ 120 (374)
++......++.+...+++.
T Consensus 87 ~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCH
T ss_pred CCchHHHHHHHHHHHcCCH
Confidence 9999888888887765554
No 87
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.29 E-value=8.8e-11 Score=93.33 Aligned_cols=99 Identities=24% Similarity=0.402 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|++++|+.+|.+++...|.+..++..+|.++..+|++++|+..+.+++.+.|....+++.+|.+++.+
T Consensus 37 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 116 (136)
T 2fo7_A 37 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCC
Q 017264 84 EEYETAKVALEKGASLAPG 102 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~ 102 (374)
|++++|+.+|.+++.++|+
T Consensus 117 ~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 117 GDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred ccHHHHHHHHHHHHccCCC
Confidence 9999999999999998886
No 88
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.28 E-value=7.3e-12 Score=130.53 Aligned_cols=112 Identities=10% Similarity=-0.064 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|++|+..|+++|+++|+++.+++++|.+|.++|++++ +.+|++|++++|++..+|+++|.+|.
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~ 545 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARS 545 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
.+|++++|+.+|+++++++|++..+...++.+.
T Consensus 546 ~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 546 AEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999988777776664
No 89
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.28 E-value=1.6e-11 Score=111.09 Aligned_cols=118 Identities=13% Similarity=0.026 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--C-CHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP--S-MSKAYWRKATA 79 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p--~-~~~a~~~lg~~ 79 (374)
+.++..|..++..|+|++|+..|.++++.+|.+..++..+|.+|..+|++++|+..+.+++...+ . ...+++.+|.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~ 83 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI 83 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999432 2 25669999999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+..+|++++|+.+|+++++++|.+..+...++.+...++..
T Consensus 84 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 124 (272)
T 3u4t_A 84 LMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNF 124 (272)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCH
Confidence 99999999999999999999999999888888888776654
No 90
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.28 E-value=3e-11 Score=114.58 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=101.9
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~--~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
...|..+...|++++|+.+|.+++..+|. ++.++..+|.+|..+|++++|+..|++++.++|.+..+|+.+|.+|..+
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 260 (365)
T 4eqf_A 181 RRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANG 260 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 34588999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
|++++|+.+|+++++++|++..+...++.+...+++.
T Consensus 261 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 261 DRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAY 297 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCH
Confidence 9999999999999999999998888888887765543
No 91
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.27 E-value=1.2e-10 Score=101.58 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-QNFTEAVADANRAIE--LEPSMSKAYWRKATAC 80 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l-~~~~~Al~~~~~al~--l~p~~~~a~~~lg~~~ 80 (374)
.+...|..++..|++++|+.+|.+++..+|.+..++..+|.+|..+ |++++|+..+++++. ..|....+++.+|.++
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICS 123 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHH
Confidence 4567888888889999999999999988888888888889999888 899999999988888 5666678888889999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
..+|++++|+.+|+++++..|.+..+...++.+...++.
T Consensus 124 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 162 (225)
T 2vq2_A 124 AKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQ 162 (225)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCC
Confidence 999999999999998888888888777777776655444
No 92
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.27 E-value=4.6e-11 Score=102.24 Aligned_cols=116 Identities=11% Similarity=0.071 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHH------------------------
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADA------------------------ 59 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~------------------------ 59 (374)
.++..|..++..|+|++|+..|.+++..+|+++.+++.+|.+|..+|++++|+..+
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 87 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQ 87 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhh
Confidence 45778888888888888888888888888888888888888888888877765544
Q ss_pred ----------HHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--hhHHHHHHHHHHHHHh
Q 017264 60 ----------NRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD--SRFTNLIKECEERIAE 119 (374)
Q Consensus 60 ----------~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~--~~~~~~~~~~~~~l~~ 119 (374)
++++.++|++..+++.+|.++..+|++++|+.+|+++++++|+. ......+..+...++.
T Consensus 88 ~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred cccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC
Confidence 44556678888888999999999999999999999999988875 3466666666655543
No 93
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.27 E-value=5.8e-11 Score=106.28 Aligned_cols=114 Identities=18% Similarity=0.077 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+|+.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 117 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYE 117 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH
Confidence 34566777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred hcCHHHHHHHHHHHHh--cCCCChhHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGAS--LAPGDSRFTNLIKECEER 116 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~--l~p~~~~~~~~~~~~~~~ 116 (374)
+|++++|+.+|++++. ..|.+..+...++.+...
T Consensus 118 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 153 (252)
T 2ho1_A 118 QKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ 153 (252)
T ss_dssp TTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH
Confidence 7777777777777777 555555555555554443
No 94
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.26 E-value=9.5e-11 Score=104.88 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE--LEPSMSKAYWRKATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~--l~p~~~~a~~~lg~~~ 80 (374)
..+...|..++..|++++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++. ..|....+++.+|.++
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~ 151 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 151 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHH
Confidence 34667788888888888888888888888888888888888888888888888888888888 7777888888888888
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
+.+|++++|+.+|++++++.|.+..+...++.+...++.
T Consensus 152 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 190 (252)
T 2ho1_A 152 LQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKERE 190 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCC
Confidence 888888888888888888888887777776666554433
No 95
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.3e-10 Score=114.59 Aligned_cols=103 Identities=20% Similarity=0.313 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|+.++..|+|++|+..|++++..+| ++.++..+|.||.++|++++|+.++++++.++|++..+++.+|.+|+
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 84 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANE 84 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999 59999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChh
Q 017264 82 KLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
.+|++++|+.+|++++.+.|.+..
T Consensus 85 ~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 85 GLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999986654
No 96
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.25 E-value=5.4e-11 Score=113.95 Aligned_cols=115 Identities=19% Similarity=0.160 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+..|.+++..+|.++.++..+|.+|.++|++++|+..|++++.++|.+..+++.+|.++..
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 317 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Confidence 34667888888999999999999999998888888888899999889999999999999999988888888889999989
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
.|++++|+.+|+++++++|++......++.+...+
T Consensus 318 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 352 (388)
T 1w3b_A 318 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 352 (388)
T ss_dssp TTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc
Confidence 99999999999988888888887777777665443
No 97
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.25 E-value=1.4e-11 Score=105.09 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=98.6
Q ss_pred HHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHhcCH
Q 017264 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-CMKLEEY 86 (374)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~-~~~lg~~ 86 (374)
.+..++..|+|++|+..|.+++..+|.++.+++.+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+ ++..|++
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 345567889999999999999999999999999999999999999999999999999999999999999999 7899999
Q ss_pred --HHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 87 --ETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 87 --~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
++|+.+|++++.++|++..+...++.+...++.
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 130 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQAN 130 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccc
Confidence 999999999999999999888888877665444
No 98
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.25 E-value=1.7e-10 Score=112.07 Aligned_cols=108 Identities=14% Similarity=0.198 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..++..|..++..|+|++|+.+|++++..+|.++.+++.+|.+|..+|++++|+..|.+++.++|++..+++.+|.+|..
T Consensus 27 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 106 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK 106 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCh---hHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDS---RFTNLI 110 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~---~~~~~~ 110 (374)
+|++++|+.+|++++.++|++. .....+
T Consensus 107 ~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 137 (450)
T 2y4t_A 107 QGKLDEAEDDFKKVLKSNPSENEEKEAQSQL 137 (450)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 9999999999999999999887 554443
No 99
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.25 E-value=1.1e-10 Score=107.88 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|++++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCC------------ChhHHHHHHHHHHHHHhh
Q 017264 83 LEEYETAKVALEKGASLAPG------------DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~------------~~~~~~~~~~~~~~l~~~ 120 (374)
+|++++|+.+|++++.+.|. +......++.+...+++.
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 302 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRP 302 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCH
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCH
Confidence 99999999999999999998 566777777776665544
No 100
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.24 E-value=1.9e-10 Score=111.73 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=108.7
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~----~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
+...|..++..|+|++|+.+|.+++...|.++ .++..+|.+|.++|++++|+..+++++.++|++..+|+.+|.+|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35569999999999999999999999999985 47899999999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
..+|++++|+.+|+++++++|++..+...+..+...++..
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999888877665
No 101
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.24 E-value=1.2e-10 Score=111.40 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=70.4
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg 84 (374)
+...|..+...|++++|+..|.+++..+|++..++..+|.++..+|++++|+..+.+++.++|++..+++.+|.+++.+|
T Consensus 172 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 251 (388)
T 1w3b_A 172 WSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQG 251 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcC
Confidence 44556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 85 EYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 85 ~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
++++|+.+|+++++++|++......++.+...
T Consensus 252 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 283 (388)
T 1w3b_A 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALKE 283 (388)
T ss_dssp CHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 66666666666666666666555555544443
No 102
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.24 E-value=8.8e-11 Score=108.68 Aligned_cols=112 Identities=17% Similarity=0.209 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhC---------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS---------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAY 73 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~---------p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~ 73 (374)
..+...|..++..|+|++|+..|.+++... |....++..+|.+|..+|++++|+..+++++.++|.+..++
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 273 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTY 273 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHH
Confidence 456789999999999999999999999986 67788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 74 ~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
+.+|.++..+|++++|+.+|+++++++|++......+..+.
T Consensus 274 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 314 (330)
T 3hym_B 274 SAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCI 314 (330)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999998888888775
No 103
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.22 E-value=1.6e-10 Score=106.88 Aligned_cols=115 Identities=11% Similarity=-0.027 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDD-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 4 ~l~~~g~~~~~~~-~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
.+...|..++..| ++++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.+.|....+++.+|.++..
T Consensus 92 ~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 171 (330)
T 3hym_B 92 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL 171 (330)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 4567777888888 788888888888888888888888888888888888888888888888888877788888888888
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
+|++++|+.+|++++.++|.+..+...++.+...++
T Consensus 172 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 172 TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNG 207 (330)
T ss_dssp TTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTT
T ss_pred HhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 888888888888888888887776666666655433
No 104
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.22 E-value=1e-10 Score=104.22 Aligned_cols=118 Identities=11% Similarity=0.074 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHH------------------ccCHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE---LFADRAQASIK------------------LQNFTEAVADANR 61 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~---~~~~ra~~~~~------------------l~~~~~Al~~~~~ 61 (374)
..++..|..++..|+|++|+..|+++++.+|++.. +++.+|.+|.. +|++++|+..|++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 46788999999999999999999999999999864 78999999986 5799999999999
Q ss_pred HHHhCCCCHHHH-----------------HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh---hHHHHHHHHHHHHHhh
Q 017264 62 AIELEPSMSKAY-----------------WRKATACMKLEEYETAKVALEKGASLAPGDS---RFTNLIKECEERIAEE 120 (374)
Q Consensus 62 al~l~p~~~~a~-----------------~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~---~~~~~~~~~~~~l~~~ 120 (374)
++...|++..++ +.+|.+|+..|+|.+|+..|+++++..|+++ .+...++.+..+++..
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 999999876543 6789999999999999999999999999987 4566667666665544
No 105
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.22 E-value=2.8e-11 Score=93.00 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=77.5
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~-~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+..|..++..|+|++|+..|.+++..+|.++. +++.+|.+|..+|++++|+..|.+++.++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR-------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------
Confidence 367888899999999999999999999999988 99999999999999999999999999999988887754
Q ss_pred cCHHHHHHHHHHHHhcCCCCh
Q 017264 84 EEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~ 104 (374)
+.+.+|+.+|.++..++|++.
T Consensus 75 ~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHhccCcccc
Confidence 566777888887777776553
No 106
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.22 E-value=2.3e-11 Score=100.49 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=88.8
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 23 DLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 23 ~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
..|.+++..+|.+...++.+|.++++.|+|++|+..|.+++.++|.++.+|+.+|.+|..+|+|++|+.+|++++.++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhh
Q 017264 103 DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 103 ~~~~~~~~~~~~~~l~~~ 120 (374)
+......++.+...+++.
T Consensus 85 ~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp CTHHHHHHHHHHHHTTCH
T ss_pred CcHHHHHHHHHHHHcCCH
Confidence 999888888887765554
No 107
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.22 E-value=2e-10 Score=86.09 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.++..|..++..|+|++|+.+|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++..+
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 34455555566666666666666666666655555666666666666666666666666666666555666665555544
No 108
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.21 E-value=1.8e-10 Score=108.81 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=99.3
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.++..|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..|.+++.++|.+..+++.+|.++..+
T Consensus 66 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 66 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHH
Q 017264 84 EEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
|++++|+..|++++.+.|.+....
T Consensus 146 g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 146 SLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999999876543
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.20 E-value=2.7e-10 Score=106.14 Aligned_cols=97 Identities=8% Similarity=0.070 Sum_probs=66.8
Q ss_pred hccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHH-HHHH
Q 017264 14 IDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET-AKVA 92 (374)
Q Consensus 14 ~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~e-A~~~ 92 (374)
..|+|++|+..|++++..+|.++.+++++|.+|.++|++++|+..+++++.++|+++.+++++|.++..+|++.+ +..+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 346677777777777777777777777777777777777777777777777777777777777777777777655 3466
Q ss_pred HHHHHhcCCCChhHHHHH
Q 017264 93 LEKGASLAPGDSRFTNLI 110 (374)
Q Consensus 93 ~~~a~~l~p~~~~~~~~~ 110 (374)
++++++++|+++.+....
T Consensus 258 ~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 258 LSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp HHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHH
Confidence 677777777776655443
No 110
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=9.3e-11 Score=116.53 Aligned_cols=103 Identities=25% Similarity=0.378 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..++..|..++..|+|++|+..|++++..+|+++.++..+|.||..+|++++|+..|.+++.++|++..+++.+|.++.
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 104 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANE 104 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChh
Q 017264 82 KLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
.+|++++|+..|+ ++.++|+...
T Consensus 105 ~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 105 SLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHTCHHHHHHHHH-HHC-------
T ss_pred HcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999996 8888887654
No 111
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.17 E-value=2.6e-10 Score=108.50 Aligned_cols=96 Identities=17% Similarity=0.156 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
+..+.+.|.+++..|+|++|+.+|+++|.++|+++.+++++|.+|..+|++++|+.+|++++.++|++..+++.+|.++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCHHHHH-HHHHHHH
Q 017264 82 KLEEYETAK-VALEKGA 97 (374)
Q Consensus 82 ~lg~~~eA~-~~~~~a~ 97 (374)
.+|++++|. ..|.+++
T Consensus 276 ~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 276 RIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 999999984 4565544
No 112
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.16 E-value=5.1e-10 Score=104.27 Aligned_cols=116 Identities=9% Similarity=0.008 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRA--QASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra--~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
..+...|..+...|++++|+..|.+++..+|++.......+ .++...|++++|+..|++++...|.++.+++.+|.++
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~ 210 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACH 210 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 45678899999999999999999999999999865444433 3333458999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 81 MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
..+|++++|..+|++++.++|+++.+...+..+...++
T Consensus 211 ~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g 248 (291)
T 3mkr_A 211 MAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLG 248 (291)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998887776655443
No 113
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.16 E-value=4.3e-10 Score=103.84 Aligned_cols=106 Identities=11% Similarity=0.026 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.++..|..++..|+|++|+..|.+++..+|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++..+
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 102 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 102 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHH
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNL 109 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~ 109 (374)
|++++|+.+|++++.++|.+......
T Consensus 103 ~~~~~A~~~~~~~~~~~~~~~~~~~~ 128 (327)
T 3cv0_A 103 HNANAALASLRAWLLSQPQYEQLGSV 128 (327)
T ss_dssp TCHHHHHHHHHHHHHTSTTTTTC---
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 99999999999999999987754433
No 114
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.15 E-value=5.8e-10 Score=92.80 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH--HHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRK--ATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~l--g~~~ 80 (374)
..+...|..++..|+|++|+..|.+++..+|.++.+++.+|.+|..+|++++|+..+.+++.++|.+..++..+ +..+
T Consensus 48 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~ 127 (166)
T 1a17_A 48 IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 127 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999888554 4458
Q ss_pred HHhcCHHHHHHHHHHHHh
Q 017264 81 MKLEEYETAKVALEKGAS 98 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~a~~ 98 (374)
...|++++|+.++.++..
T Consensus 128 ~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 128 VKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHH
Confidence 899999999999987654
No 115
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.13 E-value=4e-10 Score=111.92 Aligned_cols=116 Identities=15% Similarity=0.186 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|+|++|+.+|.+++..+|.++.++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+++.+
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 45567777777777888888888888878877888888888888888888888888888888887777888888888888
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
|++++|+.+|++++.++|++..+...++.+...++.
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 393 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGD 393 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 888888888888888888777777776666554443
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.13 E-value=3.2e-10 Score=105.29 Aligned_cols=104 Identities=15% Similarity=0.003 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhCCCC-----
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKL-QNFTEAVADANRAIELEPSM----- 69 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l-~~~~~Al~~~~~al~l~p~~----- 69 (374)
+..+.+.|..+...|+|++|+.+|.+||.+.+.. +.++.++|.+|..+ |++++|+.+|++|+.+.|..
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~ 156 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHH
Confidence 3467789999999999999999999999987643 56889999999995 99999999999999998754
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh
Q 017264 70 -SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 70 -~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
..++.++|.++..+|+|++|+.+|++++.+.|++..
T Consensus 157 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 567899999999999999999999999999987754
No 117
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.13 E-value=4.6e-10 Score=87.10 Aligned_cols=74 Identities=19% Similarity=0.232 Sum_probs=67.8
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 31 ~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
.+|+++.+++.+|.+|+.+|++++|+..|++++.++|+++.+|+.+|.+|..+|++++|+.+|++++++.|...
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999876543
No 118
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.12 E-value=2.2e-10 Score=103.48 Aligned_cols=109 Identities=14% Similarity=0.024 Sum_probs=99.4
Q ss_pred HHhccCHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHH
Q 017264 12 AFIDDYFELAYDLYSQAIEIS----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYE 87 (374)
Q Consensus 12 ~~~~~~y~~Al~~y~~aL~~~----p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~ 87 (374)
+...++|++|+..|.+++... |.++.+++.+|.+|..+|++++|+..|.+++.++|.+..+++.+|.+++.+|+++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 345689999999999999983 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 88 TAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 88 eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+|+.+|++++.++|.+..+...++.+...++..
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~ 127 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRD 127 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccH
Confidence 999999999999999998888888887665544
No 119
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.12 E-value=7.9e-10 Score=112.15 Aligned_cols=103 Identities=14% Similarity=0.070 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+.+|.+++..+|++..+++++|.+|..+|++++|+..++++++++|++..+++.+|.++..
T Consensus 58 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 137 (568)
T 2vsy_A 58 EAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRR 137 (568)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h---cCHHHHHHHHHHHHhcCCCChh
Q 017264 83 L---EEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 83 l---g~~~eA~~~~~~a~~l~p~~~~ 105 (374)
+ |++++|+..|+++++.+|.+..
T Consensus 138 ~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 138 LCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp TTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred hhccccHHHHHHHHHHHHhcCCcccC
Confidence 9 9999999999999999988643
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.11 E-value=2.8e-10 Score=105.65 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhc-cCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH----
Q 017264 3 TDLEKKAKEAFID-DYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSK---- 71 (374)
Q Consensus 3 ~~l~~~g~~~~~~-~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~---- 71 (374)
..+.+.|..+... |+|++|+.+|.+||.+.|.+ ..++.++|.+|.++|+|++|+..|++++.+.|.+..
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 197 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGG
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHH
Confidence 4577899999996 99999999999999997754 567899999999999999999999999999987543
Q ss_pred ---HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh
Q 017264 72 ---AYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 72 ---a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
+++++|.++..+|++++|+.+|++++.++|+...
T Consensus 198 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 6899999999999999999999999999998664
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.11 E-value=1.7e-09 Score=105.89 Aligned_cols=118 Identities=16% Similarity=0.111 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE------- 66 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~---------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~------- 66 (374)
..+...|..++..|+|++|++.|.+|+++ +|.....|.++|.+|..+|++++|+.++++++.+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 34567899999999999999999999987 67778899999999999999999999999999874
Q ss_pred -CCCHHHHHHHHHHHHHh--cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 67 -PSMSKAYWRKATACMKL--EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 67 -p~~~~a~~~lg~~~~~l--g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+..+.++..+|.++... ++|++|+.+|+++++++|+++.+...+..+...+...
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 35678899999887665 5799999999999999999999888888877666554
No 122
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.10 E-value=9.6e-10 Score=85.38 Aligned_cols=86 Identities=21% Similarity=0.242 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hhHHH
Q 017264 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTN 108 (374)
Q Consensus 35 ~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~------~~~~~ 108 (374)
++..++.+|.++..+|+|++|+..|.+++.++|.++.+++++|.+++.+|+|++|+.+|++++.++|++ ..+..
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999999999999999999998 66667
Q ss_pred HHHHHHHHHHhh
Q 017264 109 LIKECEERIAEE 120 (374)
Q Consensus 109 ~~~~~~~~l~~~ 120 (374)
.++.+...++..
T Consensus 83 ~~~~~~~~~~~~ 94 (111)
T 2l6j_A 83 RLELAQGAVGSV 94 (111)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhH
Confidence 777777777644
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.09 E-value=3.7e-10 Score=91.76 Aligned_cols=77 Identities=25% Similarity=0.261 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
+.++.++|.+|++.|+|++|+..|.+|+.++|+++.+|+++|.+|+.+|+|++|+.+|+++++++|++......+.+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999877643333333
No 124
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.09 E-value=3.6e-10 Score=101.82 Aligned_cols=117 Identities=21% Similarity=0.223 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~--------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l--------~ 66 (374)
..+...|..++..|+|++|+.+|.+++.. .|....++..+|.+|..+|++++|+..+.+++.+ +
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45788999999999999999999999988 3556789999999999999999999999999998 4
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCChhHHHHHHHHHHHHHh
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l--------~p~~~~~~~~~~~~~~~l~~ 119 (374)
|....+++.+|.+++.+|++++|+.+|++++.+ .|....+...++.+...+++
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 184 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGK 184 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC
Confidence 677889999999999999999999999999998 55445566666666655444
No 125
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.09 E-value=5.7e-10 Score=89.50 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 34 ~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
..+..+..+|.++++.|+|++|+..|.+++.++|.++.+++.+|.+++.+|+|++|+.+|+++++++|++......++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHhh
Q 017264 114 EERIAEE 120 (374)
Q Consensus 114 ~~~l~~~ 120 (374)
...++..
T Consensus 82 ~~~~~~~ 88 (126)
T 3upv_A 82 QIAVKEY 88 (126)
T ss_dssp HHHTTCH
T ss_pred HHHHhCH
Confidence 7765544
No 126
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.08 E-value=1e-09 Score=82.15 Aligned_cols=83 Identities=24% Similarity=0.396 Sum_probs=77.4
Q ss_pred CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 34 NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 34 ~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
.++.+++.+|.+|..+|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|++......++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999888888777
Q ss_pred HHH
Q 017264 114 EER 116 (374)
Q Consensus 114 ~~~ 116 (374)
...
T Consensus 87 ~~~ 89 (91)
T 1na3_A 87 KQK 89 (91)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 127
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.06 E-value=2.2e-09 Score=108.26 Aligned_cols=114 Identities=15% Similarity=0.117 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCC-HHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL------EPSM-SKAYWRK 76 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l------~p~~-~~a~~~l 76 (374)
.+...|..+...|++++|+.+|.+++...|.++.++..+|.+|.+.|++++|+..|++++.+ +|.. ..+|..+
T Consensus 443 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l 522 (597)
T 2xpi_A 443 PYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANL 522 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHH
Confidence 34556666667777777777777777777777776777777777777777777777776666 4443 5666667
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 77 ATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 77 g~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
|.+|...|++++|+..|+++++++|++......+..+....
T Consensus 523 ~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 563 (597)
T 2xpi_A 523 GHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHK 563 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Confidence 77777777777777777777766666666665555555443
No 128
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.04 E-value=2e-09 Score=90.06 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=96.2
Q ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHhcCHHHHH
Q 017264 16 DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ---NFTEAVADANRAIELE-P-SMSKAYWRKATACMKLEEYETAK 90 (374)
Q Consensus 16 ~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~---~~~~Al~~~~~al~l~-p-~~~~a~~~lg~~~~~lg~~~eA~ 90 (374)
.....+.+.|.+.+..++.+..+.+++|.|+.+.+ ++.+++..++.+++.+ | +..+++|.+|++++++|+|++|+
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 34567888899999989999999999999999988 7779999999999998 7 67899999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 91 VALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
.+++++++.+|+|.........+++++.+.
T Consensus 92 ~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kd 121 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAKELERLIDKAMKKD 121 (152)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998888774
No 129
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.03 E-value=2.9e-09 Score=85.63 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 38 ~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
.++.+|.++.+.|++++|+..|++++.++|++..+|+.+|.++..+|++++|+.+|+++++++|++......++.+...+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999888888888777
Q ss_pred Hhh
Q 017264 118 AEE 120 (374)
Q Consensus 118 ~~~ 120 (374)
+..
T Consensus 99 g~~ 101 (121)
T 1hxi_A 99 HNA 101 (121)
T ss_dssp HHH
T ss_pred CCH
Confidence 665
No 130
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.02 E-value=4.5e-09 Score=106.00 Aligned_cols=115 Identities=13% Similarity=0.027 Sum_probs=95.5
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...|..++..|++++|+.+|.+++..+|.+..++..++.+|.+.|++++|+..|++++.+.|.+..+++.+|.+|...
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 454 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL 454 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 45667888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 84 EEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
|++++|+..|++++++.|.+......+..+..+.+
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 489 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFNKS 489 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC
Confidence 88888888888888888888877666666554433
No 131
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.01 E-value=1.7e-09 Score=91.10 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHH
Q 017264 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIK 111 (374)
Q Consensus 32 ~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~ 111 (374)
++.++..++.+|.+|+..|+|++|+..|.+++.++|.+..+|+.+|.+|+.+|+|++|+.+|+++++++|++..+...++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 34557889999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHh
Q 017264 112 ECEERIAE 119 (374)
Q Consensus 112 ~~~~~l~~ 119 (374)
.+...+++
T Consensus 87 ~~~~~~g~ 94 (164)
T 3sz7_A 87 LARFDMAD 94 (164)
T ss_dssp HHHHHTTC
T ss_pred HHHHHccC
Confidence 77765443
No 132
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.01 E-value=1.8e-09 Score=103.70 Aligned_cols=117 Identities=10% Similarity=0.147 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~----~~~~~ra~~~~~l~~~~~Al~~~~~al~l------~p~~~~a 72 (374)
..+...|..++..|+|++|+.+|.+++...|.+. .++..+|.+|..+|++++|+..+++++.+ .+....+
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 128 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKS 128 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHH
Confidence 4577899999999999999999999999999986 58999999999999999999999999998 5677889
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCChhHHHHHHHHHHHHHh
Q 017264 73 YWRKATACMKLEEYETAKVALEKGASL------APGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~l------~p~~~~~~~~~~~~~~~l~~ 119 (374)
++.+|.+|+.+|++++|+.+|++++.+ .+....+...++.+...++.
T Consensus 129 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 129 SGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 33334455666666666655
No 133
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.01 E-value=2.3e-09 Score=105.49 Aligned_cols=112 Identities=22% Similarity=0.185 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH---ccCHHHHHHHHHHHHHhCCCCHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE------LFADRAQASIK---LQNFTEAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~------~~~~ra~~~~~---l~~~~~Al~~~~~al~l~p~~~~a~~ 74 (374)
.+...|..++..|++++|+..|.+++...|.+.. ++..+|.+|.. +|++++|+..+++++.++|++..+++
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 453 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 4566777788888888888888888887776643 77788888888 78888888888888888888888888
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
.+|.++..+|++++|+..|+++++++|++......+..+..
T Consensus 454 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 454 GLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEA 494 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 88888888888888888888888888877776665544443
No 134
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.00 E-value=3.6e-09 Score=85.48 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=82.3
Q ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHH
Q 017264 30 EISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (374)
Q Consensus 30 ~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~ 109 (374)
..++.++..++.+|.+++..|+|++|+..|.+++.++|.++.+++.+|.+++.+|++++|+.+|+++++++|++......
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHhh
Q 017264 110 IKECEERIAEE 120 (374)
Q Consensus 110 ~~~~~~~l~~~ 120 (374)
++.+...++..
T Consensus 83 l~~~~~~~~~~ 93 (137)
T 3q49_B 83 LGQCQLEMESY 93 (137)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHHhhH
Confidence 88877665443
No 135
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.00 E-value=1.5e-09 Score=107.66 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+.++|.+++..++|++|+.+|+++|.++|+++.+|++||.+|..+++|++|+.+|.+|++++|++..++..++.++..
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK 397 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHH
Q 017264 83 LEEYETAKVA 92 (374)
Q Consensus 83 lg~~~eA~~~ 92 (374)
++++.+|...
T Consensus 398 ~~~~~~a~~~ 407 (457)
T 1kt0_A 398 AKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 136
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.00 E-value=2.2e-09 Score=93.28 Aligned_cols=95 Identities=16% Similarity=0.068 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+.+.|..++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..|.+++.++|++..++..++.++..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHH-HHHHHHH
Q 017264 83 LEEYETAK-VALEKGA 97 (374)
Q Consensus 83 lg~~~eA~-~~~~~a~ 97 (374)
++++.++. ..|...+
T Consensus 169 ~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHC----------
T ss_pred HHHHHHHHHHHHHHHh
Confidence 99988877 4444443
No 137
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.00 E-value=4.5e-09 Score=83.09 Aligned_cols=84 Identities=24% Similarity=0.173 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 47 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 47 VYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCH
Q 017264 83 LEEY 86 (374)
Q Consensus 83 lg~~ 86 (374)
+|++
T Consensus 127 ~~~~ 130 (131)
T 2vyi_A 127 LREA 130 (131)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9875
No 138
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=3.4e-09 Score=98.87 Aligned_cols=112 Identities=10% Similarity=-0.011 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAE-LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~-~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
.+...|..+...|++++|+..|+++|...|.++. ++..+|.++.++|++++|+..|.+|++++|....+|+.++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4567778888888888888888888888888776 788888888888888888888888888888777777766666443
Q ss_pred -hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 83 -LEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 83 -lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
+|++++|+.+|+++++++|++..+...+..+..
T Consensus 181 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 688888888888888888887766655555543
No 139
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.98 E-value=3.6e-09 Score=97.19 Aligned_cols=117 Identities=9% Similarity=0.148 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIEL------EPSMSKA 72 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~----~~~~~~ra~~~~~l~~~~~Al~~~~~al~l------~p~~~~a 72 (374)
..++..|..++..|+|++|+.+|.+++...|.+ ..++..+|.+|..+|++++|+..+.+++.+ .+....+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 467889999999999999999999999999998 478889999999999999999999999987 3456789
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh------HHHHHHHHHHHHHh
Q 017264 73 YWRKATACMKLEEYETAKVALEKGASLAPGDSR------FTNLIKECEERIAE 119 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~------~~~~~~~~~~~l~~ 119 (374)
++.+|.+++.+|++++|+.+|++++.+.+.... +...++.+...++.
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988664432 44455555555555
No 140
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.98 E-value=2.2e-09 Score=90.10 Aligned_cols=85 Identities=13% Similarity=0.049 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMS-KAYWRKATACM 81 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~-~a~~~lg~~~~ 81 (374)
..+.+.|.+++..|+|++|+..|+++|.++|.++.+|+.+|.+|..+|++++|+.+|.+++.++|++. .+...++.+..
T Consensus 64 ~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~ 143 (162)
T 3rkv_A 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTE 143 (162)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999998 66767777766
Q ss_pred HhcCHH
Q 017264 82 KLEEYE 87 (374)
Q Consensus 82 ~lg~~~ 87 (374)
.++++.
T Consensus 144 ~~~~~~ 149 (162)
T 3rkv_A 144 RRAEKK 149 (162)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 655543
No 141
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.98 E-value=4e-09 Score=84.06 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..+.+++.++|.+..+++.++.++..
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcC
Q 017264 83 LEE 85 (374)
Q Consensus 83 lg~ 85 (374)
+|+
T Consensus 131 ~~~ 133 (133)
T 2lni_A 131 QYN 133 (133)
T ss_dssp HTC
T ss_pred hcC
Confidence 774
No 142
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.98 E-value=4.7e-10 Score=106.84 Aligned_cols=102 Identities=11% Similarity=0.001 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC-MK 82 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~-~~ 82 (374)
.+.+.|.+++..|+|++|+.+|+++|.++|++..+|+++|.+|..+|+|++|+.+|++++.++|++..++..++.+. ..
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999884 55
Q ss_pred hcCHHHHHHHHHHHHhcCCCChh
Q 017264 83 LEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
.+.++.+...|.+++...|.+..
T Consensus 312 ~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 312 KALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhCCCCCCCC
Confidence 67788889999999999987763
No 143
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.98 E-value=7.3e-10 Score=110.61 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA-- 79 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~-- 79 (374)
+..+...|..++..|+|++|+..|.+|++++|.++.+++++|.+|..+|++++|+..|+++++++|++..++..++.+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 346788999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhcCHHHHHHHHH-----------HHHhcCCCC
Q 017264 80 CMKLEEYETAKVALE-----------KGASLAPGD 103 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~-----------~a~~l~p~~ 103 (374)
+..+|+|++|+..++ +++.++|+.
T Consensus 120 ~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 120 IVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 899999999999999 777776653
No 144
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.97 E-value=4e-09 Score=94.87 Aligned_cols=97 Identities=21% Similarity=0.192 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~--------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l--------~ 66 (374)
..+...|..++..|+|++|+.+|.+++.. +|....++.++|.+|..+|++++|+..+.+++.+ .
T Consensus 86 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 165 (283)
T 3edt_B 86 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDD 165 (283)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45778999999999999999999999998 4667889999999999999999999999999999 6
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
|....+++.+|.++..+|++++|+.+|++++.+
T Consensus 166 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 166 PNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999986
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.96 E-value=2.2e-08 Score=90.96 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKA 77 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p~~~~a~~~lg 77 (374)
+..++..|..++..+++++|+.+|.+++. +.++.+++.+|.+|.. .+++++|+..|.+++.++ ++.+++.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 45678899999999999999999999998 7788999999999999 999999999999999986 789999999
Q ss_pred HHHHH----hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 78 TACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 78 ~~~~~----lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
.+|.. .+++++|+.+|++++.++ +......++.+...
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 99999 999999999999999874 66666666665543
No 146
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.96 E-value=3e-09 Score=81.98 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=80.4
Q ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--ChhHHHH
Q 017264 32 SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG--DSRFTNL 109 (374)
Q Consensus 32 ~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~--~~~~~~~ 109 (374)
+|+++.+++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|+++++++|. +..+...
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 57888899999999999999999999999999999999999999999999999999999999999999999 8888877
Q ss_pred HHHHHHHH
Q 017264 110 IKECEERI 117 (374)
Q Consensus 110 ~~~~~~~l 117 (374)
++.+...+
T Consensus 82 l~~~~~~~ 89 (112)
T 2kck_A 82 KADALRYI 89 (112)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHH
Confidence 77776655
No 147
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.96 E-value=3.9e-09 Score=100.44 Aligned_cols=118 Identities=10% Similarity=0.157 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----AELFADRAQASIKLQNFTEAVADANRAIELE------PSMSK 71 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~----~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~------p~~~~ 71 (374)
+..++..|..++..|+|++|+.+|++++...|.+ ..++..+|.+|..+|++++|+..+.+++.+. +....
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4567899999999999999999999999999998 4688999999999999999999999999873 44578
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh------hHHHHHHHHHHHHHh
Q 017264 72 AYWRKATACMKLEEYETAKVALEKGASLAPGDS------RFTNLIKECEERIAE 119 (374)
Q Consensus 72 a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~------~~~~~~~~~~~~l~~ 119 (374)
+++.+|.++..+|++++|+.+|++++.+.+... .+...++.+...++.
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998876432 255555666555555
No 148
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.95 E-value=4e-09 Score=83.79 Aligned_cols=78 Identities=12% Similarity=-0.037 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
..+...|..++..|+|++|+..|.+++..+|+++.+++++|.||..+|++++|+..+.+++.+.|+++........+.
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999987654433333
No 149
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.94 E-value=3.4e-09 Score=86.81 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------ 69 (374)
+..+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+.+++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 4567889999999999999999999999985432 2588999999999999999999999999886542
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p 101 (374)
..+++.+|.++..+|++++|+.+|++++.+..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999987743
No 150
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.94 E-value=1.2e-08 Score=95.08 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=93.5
Q ss_pred HHHHHHHHHH-------hccCH-------HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 017264 4 DLEKKAKEAF-------IDDYF-------ELAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (374)
Q Consensus 4 ~l~~~g~~~~-------~~~~y-------~~Al~~y~~aL~-~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~ 68 (374)
.+...|..+. ..|++ ++|+..|.+|+. ++|.+..++..+|.++..+|++++|+..|++++.+.|.
T Consensus 52 ~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 131 (308)
T 2ond_A 52 IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI 131 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc
Confidence 4556666665 35775 999999999999 79999999999999999999999999999999999999
Q ss_pred CHH-HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 69 MSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 69 ~~~-a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
+.. +|+.+|.++...|++++|+..|++++++.|....+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 171 (308)
T 2ond_A 132 DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY 171 (308)
T ss_dssp CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHH
T ss_pred CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Confidence 887 999999999999999999999999999999876543
No 151
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.92 E-value=8e-09 Score=78.95 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=66.1
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSK-AYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 39 ~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~-a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
.+.+|.++...|++++|+..|++++.++|.+.. +++.+|.+|+.+|++++|+.+|+++++++|++....
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999999876
No 152
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.91 E-value=4.1e-09 Score=98.48 Aligned_cols=100 Identities=23% Similarity=0.253 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------~ 70 (374)
..+.+.|..+.. |+|++|+.+|.+||.+.+.. ..++.++|.+|.++|+|++|+..|++++.+.+.+ .
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCY 195 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHH
Confidence 456778888888 99999999999999886543 5788889999999999999999999999886543 3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
.+++.+|.++..+|++++|+.+|++++ ++|...
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 478888999999999999999999999 888654
No 153
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.91 E-value=3.8e-09 Score=101.24 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEPSM------ 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~-------~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------ 69 (374)
..+...|..++..|+|+.|+.+|.+|+.+.+. ...++.++|.+|..+|++++|+..+.+|+.+.+..
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 223 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLM 223 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHH
Confidence 45667777777777777777777777776332 24567777777777777777777777777765432
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----C-CCChhHHHHHHHHHHH
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASL-----A-PGDSRFTNLIKECEER 116 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l-----~-p~~~~~~~~~~~~~~~ 116 (374)
..+++++|.+|..+|++++|+.+|++++.+ + |....+...++.+...
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 246777777777777777777777777773 3 4444444555554443
No 154
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.91 E-value=3e-09 Score=98.45 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh---C----CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---S----PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~---~----p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~------~ 69 (374)
..+...|..++..|+|++|+.+|.+++.. . +....+++++|.+|.++|+|++|+..+.+++.+.+. .
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~ 235 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 35788999999999999999999999963 1 222468899999999999999999999999998643 3
Q ss_pred HHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcC
Q 017264 70 SKAYWRKATACMKLE-EYETAKVALEKGASLA 100 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg-~~~eA~~~~~~a~~l~ 100 (374)
+.+++++|.++..+| .+++|+.+|++++.+.
T Consensus 236 ~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 789999999999999 5799999999998653
No 155
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.91 E-value=5.4e-09 Score=88.42 Aligned_cols=85 Identities=18% Similarity=0.159 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHhcCHHHHHHHHHHHHhc----
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSK-----AYWRKATACMKLEEYETAKVALEKGASL---- 99 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~-------~~~-----a~~~lg~~~~~lg~~~eA~~~~~~a~~l---- 99 (374)
+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|.+++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 467889999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCChhHH----HHHHHHHHHHHhh
Q 017264 100 ---APGDSRFT----NLIKECEERIAEE 120 (374)
Q Consensus 100 ---~p~~~~~~----~~~~~~~~~l~~~ 120 (374)
+|++...+ ...+.+...+++.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~ 118 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRG 118 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCH
Confidence 99988877 7777776665554
No 156
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.91 E-value=3.8e-09 Score=96.68 Aligned_cols=117 Identities=21% Similarity=0.257 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIKLQNFTEAVADANRAIELE-------- 66 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~--------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~-------- 66 (374)
..+...|..++..|+|++|+.+|.+++.. .+....++..+|.+|..+|++++|+..+.+++.+.
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45678999999999999999999999988 35567899999999999999999999999999884
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCChhHHHHHHHHHHHHHh
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL--------APGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l--------~p~~~~~~~~~~~~~~~l~~ 119 (374)
+....+++.+|.++..+|++++|+.+|++++.+ .|....+...++.+...+++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 210 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK 210 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC
Confidence 556788999999999999999999999999988 44444455556665554443
No 157
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.90 E-value=8.6e-09 Score=99.44 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+.+.|..++..|+|++|+.+|+++|.++|.++.+++++|.+|..+|++++|+.+|++|++++|++..++..++.++..
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~ 353 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQK 353 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCHHHHHHH
Q 017264 83 LEEYETAKVA 92 (374)
Q Consensus 83 lg~~~eA~~~ 92 (374)
++++.++...
T Consensus 354 ~~~~~~a~k~ 363 (370)
T 1ihg_A 354 IKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 158
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.89 E-value=9.4e-09 Score=79.55 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATA 79 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~--~~~a~~~lg~~ 79 (374)
+..++..|..++..|+|++|+..|.++++++|+++.+++.+|.+|..+|++++|+..|++++.+.|. +......+..+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999999999999764 34444445555
Q ss_pred HHHhc
Q 017264 80 CMKLE 84 (374)
Q Consensus 80 ~~~lg 84 (374)
+...+
T Consensus 87 l~~~~ 91 (100)
T 3ma5_A 87 KLKAE 91 (100)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 44433
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.88 E-value=9.3e-09 Score=95.11 Aligned_cols=98 Identities=20% Similarity=0.242 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAI---EISPNSA----ELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL---~~~p~~~----~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~------~ 69 (374)
..+...|..++..|+|++|+.+|.+|+ ...+.+. .+++++|.+|..+|+|++|+..+++++.+.+. .
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~ 235 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALI 235 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 356778888888888888888888888 4455532 57888888888888888888888888877532 2
Q ss_pred HHHHHHHHHHHHHhcCHHHH-HHHHHHHHhcC
Q 017264 70 SKAYWRKATACMKLEEYETA-KVALEKGASLA 100 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA-~~~~~~a~~l~ 100 (374)
+.+++++|.+|..+|++++| ..+|++++.+.
T Consensus 236 ~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 236 GQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 67888888888888888888 67788877653
No 160
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=6.2e-09 Score=95.24 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIEL--------E 66 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~--------p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l--------~ 66 (374)
..+...|..++..|+|++|+.+|.+++... +....++..+|.+|..+|++++|+..+.+++.+ .
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 191 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDD 191 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 456789999999999999999999999984 555788999999999999999999999999998 6
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
|....+++.+|.+|..+|++++|+.+|++++.+
T Consensus 192 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 192 PNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 677889999999999999999999999999975
No 161
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.87 E-value=1.2e-08 Score=83.41 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------CCH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEP------SMS 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p------~~~ 70 (374)
..+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+.+++.+.+ ...
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 457789999999999999999999999985443 56889999999999999999999999998743 235
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p 101 (374)
.+++.+|.+++.+|++++|+.+|++++++..
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999987654
No 162
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.87 E-value=2.6e-08 Score=92.06 Aligned_cols=113 Identities=11% Similarity=0.018 Sum_probs=90.0
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHH---HhCCCC----HH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAI---ELEPSM----SK 71 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al---~l~p~~----~~ 71 (374)
+...|..+...|+|++|+.+|.+++...+.. ..++.++|.+|..+|+|++|+..|.+|+ ...++. ..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~ 197 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVK 197 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHH
Confidence 3457788888999999999999999875443 5689999999999999999999999999 445553 26
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHHHH
Q 017264 72 AYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERI 117 (374)
Q Consensus 72 a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~------~~~~~~~~~~~~~l 117 (374)
+++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...+
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999875321 23444455554443
No 163
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.86 E-value=6.8e-09 Score=89.33 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CC----CC
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIEL---EP----SM 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l---~p----~~ 69 (374)
..+...|..++..|+|++|+.+|.+++.. .+....++.++|.+|..+|++++|+..+.+++.+ .+ ..
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 106 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAA 106 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHH
Confidence 45778999999999999999999999994 3444678999999999999999999999999988 33 23
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
..+++.+|.++..+|++++|+.+|++++.+.
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999998764
No 164
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.86 E-value=3.9e-08 Score=76.90 Aligned_cols=82 Identities=23% Similarity=0.332 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
..+...|..++..|+|++|+..|.+++...|.+..++..+|.+|..+|++++|+..+.+++.++|.+..+++.+|.++..
T Consensus 44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hc
Q 017264 83 LE 84 (374)
Q Consensus 83 lg 84 (374)
+|
T Consensus 124 ~g 125 (125)
T 1na0_A 124 QG 125 (125)
T ss_dssp HC
T ss_pred cc
Confidence 65
No 165
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.85 E-value=4e-08 Score=100.12 Aligned_cols=116 Identities=7% Similarity=-0.015 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhccC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCH
Q 017264 3 TDLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMS 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~----------y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~--~~~~Al~~~~~al~l~p~~~ 70 (374)
..+..++..+...++ |++|+..|+++|..+|.+..+|..|+.++.+++ ++++|+..+.++++++|.+.
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~ 143 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF 143 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc
Confidence 456778888888888 999999999999999999999999999999999 77999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 71 KAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 71 ~a~~~lg~~~~~lg-~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
.+|..++.++..+| .+++|++++.++++.+|.|..+......+...+.
T Consensus 144 ~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~ 192 (567)
T 1dce_A 144 HCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLH 192 (567)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhc
Confidence 99999999999999 9999999999999999999999888888866653
No 166
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=9.7e-08 Score=86.68 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHH
Q 017264 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 3 ~~l~~~g~~~~~----~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p~~~~a~~ 74 (374)
..+...|..++. .+++++|+.+|.++++.+ ++.+++.+|.+|.. .+++++|+..|++++.++ ++.+++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 114 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCA 114 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHH
Confidence 456778888888 999999999999998875 78888999999998 899999999999998874 788899
Q ss_pred HHHHHHHH----hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 75 ~lg~~~~~----lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
.+|.+|.. .+++++|+.+|+++++++ +......++.+.
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~ 156 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLY 156 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHH
Confidence 99999998 999999999999998876 344444554443
No 167
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.84 E-value=5.8e-09 Score=96.49 Aligned_cols=113 Identities=10% Similarity=0.004 Sum_probs=91.1
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHH
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKA 72 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~-------p~~~~a 72 (374)
...|..++..++|++|+.+|.+++...+.. ..++.++|.+|..+|+|++|+..|.+++.+. +....+
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 357888888999999999999999964332 3478999999999999999999999999532 234568
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHHHHH
Q 017264 73 YWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIA 118 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~------~~~~~~~~~~~~~l~ 118 (374)
++++|.+|+.+|+|++|+.+|++++.+.+.. ..+...++.+...++
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999876443 345555666655544
No 168
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.84 E-value=4.5e-08 Score=92.00 Aligned_cols=116 Identities=9% Similarity=-0.057 Sum_probs=102.7
Q ss_pred HHHHHHHHHHhccCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYF-ELAYDLYSQAIEISPNSAELFADRAQASIKLQ--NFTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y-~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~--~~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
.++......++.+.| ++|+.+++++|.++|++..++..|+.++..++ ++++++..+..++.++|.+..+|..++.++
T Consensus 34 ~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL 113 (306)
T 3dra_A 34 QIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLII 113 (306)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHH
Confidence 345566666777777 68999999999999999999999999999999 999999999999999999999999999999
Q ss_pred ----HHh---cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 81 ----MKL---EEYETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 81 ----~~l---g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
..+ +++.+++.++.++++.+|.+..+....+.+...++.
T Consensus 114 ~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~ 159 (306)
T 3dra_A 114 GQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDL 159 (306)
T ss_dssp HHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 777 789999999999999999999888888877666543
No 169
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.83 E-value=1.4e-08 Score=97.19 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hC-CCCH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIE-----LE-PSMS 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~-----l~-p~~~ 70 (374)
..+...|..+...|+|++|+.+|.+++.+.+.. ..++.++|.+|..+|++++|+..+.+++. .+ |...
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 264 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLP 264 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHH
Confidence 457789999999999999999999999985433 35899999999999999999999999999 45 7788
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p 101 (374)
.+++.+|.+++.+|++++|+.+|++++.+.+
T Consensus 265 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 265 QAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998753
No 170
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.81 E-value=7.1e-08 Score=74.14 Aligned_cols=74 Identities=16% Similarity=0.031 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh
Q 017264 32 SPNSAELFADRAQASIKLQN---FTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 32 ~p~~~~~~~~ra~~~~~l~~---~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
+|.++.++..+|.+++..++ ..+|...+.+|+.++|+++.+++.+|..++..|+|++|+.+|++++..+|.++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 68899999999999987665 799999999999999999999999999999999999999999999999998543
No 171
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.81 E-value=6.9e-09 Score=96.90 Aligned_cols=101 Identities=11% Similarity=0.039 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------~ 70 (374)
..+.+.|..+...|+|++|+.+|.+|+.+.+.. ..++.++|.+|.. |++++|+..|++|+.+.+.. .
T Consensus 77 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 77 KAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 456788999999999999999999999984322 4688899999988 99999999999999987643 5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
.+++++|.+|..+|+|++|+.+|++++.+.+.+.
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999876543
No 172
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.81 E-value=4.3e-08 Score=95.85 Aligned_cols=103 Identities=22% Similarity=0.117 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-------------------cCHHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKL-------------------QNFTEAVADANRAI 63 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l-------------------~~~~~Al~~~~~al 63 (374)
..+...|..+...|++++|+..|.++++.+|+++.++..+|.||... +.++.|+..+.+++
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 327 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKAD 327 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999888543 34678888899999
Q ss_pred HhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh
Q 017264 64 ELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 64 ~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
.++|.+..+++.+|.++..+|+|++|+.+|++++.+++.+..
T Consensus 328 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 328 EANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp HHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred hcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 999998889999999999999999999999999998887654
No 173
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.80 E-value=6.7e-08 Score=90.81 Aligned_cols=116 Identities=8% Similarity=0.056 Sum_probs=105.4
Q ss_pred HHHHHHHHH----Hhc---cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHH--HHHHHHHHHHHhCCCCHHHHH
Q 017264 4 DLEKKAKEA----FID---DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFT--EAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 4 ~l~~~g~~~----~~~---~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~--~Al~~~~~al~l~p~~~~a~~ 74 (374)
.+..++..+ ... +++.+++..++++|..+|.+..++..|+.++.+++.++ +++..+.+++.++|.+..+|.
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 345566666 444 78999999999999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHHhcC------HHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 75 RKATACMKLEE------YETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 75 ~lg~~~~~lg~------~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
.++.++..+++ +++++.++.+++.++|+|..+...+..+...++.
T Consensus 185 ~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 185 HRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999998 9999999999999999999999888888766554
No 174
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.80 E-value=2e-08 Score=100.44 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCC
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPSM 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~~ 69 (374)
..+...+..+..+|+|++|+.+|.++|.+ .+++ +..+.++|.+|..+|+|++|+..+++++.+ .+++
T Consensus 310 ~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 310 KDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34566777888999999999999999987 3444 578999999999999999999999999975 4444
Q ss_pred ---HHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----cCCCChhHH---HHHHHHHHHHHh
Q 017264 70 ---SKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFT---NLIKECEERIAE 119 (374)
Q Consensus 70 ---~~a~~~lg~~~~~lg~~~eA~~~~~~a~~-----l~p~~~~~~---~~~~~~~~~l~~ 119 (374)
+..+.++|.+|..+|+|++|...|++++. +.|+++... ..+..++..++.
T Consensus 390 p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 390 AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999986 467877544 445555544443
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.80 E-value=3.8e-08 Score=94.22 Aligned_cols=101 Identities=15% Similarity=0.020 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP------NSAELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMS 70 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p------~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~-----l~p~~~ 70 (374)
+..+...|..++..|+|++|+.+|.+++.+.+ ....++.++|.+|..+|++++|+..+.+++. .+|...
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 261 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP 261 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH
Confidence 34567899999999999999999999999732 1246889999999999999999999999999 677778
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
.+++.+|.+++.+|++++|+.+|++++.+.+.
T Consensus 262 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 262 KVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998654
No 176
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.79 E-value=1.9e-08 Score=84.86 Aligned_cols=70 Identities=20% Similarity=0.205 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHhccCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-----------CHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYF----------ELAYDLYSQAIEISPNSAELFADRAQASIKLQ-----------NFTEAVADAN 60 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y----------~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~-----------~~~~Al~~~~ 60 (374)
++.+++.|.++...+++ ++|+..|++||+++|++..+|+++|.+|..+| ++++|+.+|+
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 45778899999988775 59999999999999999999999999999885 8999999999
Q ss_pred HHHHhCCCCHH
Q 017264 61 RAIELEPSMSK 71 (374)
Q Consensus 61 ~al~l~p~~~~ 71 (374)
+|+.++|++..
T Consensus 116 kAl~l~P~~~~ 126 (158)
T 1zu2_A 116 QAVDEQPDNTH 126 (158)
T ss_dssp HHHHHCTTCHH
T ss_pred HHHHhCCCCHH
Confidence 99999999853
No 177
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.79 E-value=2.9e-08 Score=91.87 Aligned_cols=102 Identities=18% Similarity=0.012 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CC-CHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAVADANRAIELE--PS-MSKAYWRKAT 78 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~--~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~--p~-~~~a~~~lg~ 78 (374)
..+..|..+++.++|++|+.+|+.++...... ..+++++|.++..+|++++|+..|++++... |. ...+++++|.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~gl 216 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAM 216 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHH
Confidence 35677888888888888888888776642111 3578889999999999999999999888543 44 5678899999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCChhH
Q 017264 79 ACMKLEEYETAKVALEKGASLAPGDSRF 106 (374)
Q Consensus 79 ~~~~lg~~~eA~~~~~~a~~l~p~~~~~ 106 (374)
++..+|+.++|...|++++..+|+ ..+
T Consensus 217 aL~~lGr~deA~~~l~~a~a~~P~-~~~ 243 (282)
T 4f3v_A 217 ARRSQGNESAAVALLEWLQTTHPE-PKV 243 (282)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-HHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCc-HHH
Confidence 999999999999999999999987 543
No 178
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.79 E-value=2.9e-08 Score=91.89 Aligned_cols=90 Identities=10% Similarity=-0.018 Sum_probs=79.2
Q ss_pred HHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhcCH
Q 017264 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEY 86 (374)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~--~~a~~~lg~~~~~lg~~ 86 (374)
+..+...++++.|+..|.+++..+|++..+++++|.+|..+|++++|+..|.++++++|++ ..++.++|.++..+|+.
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred HHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 3344455555556677777888999999999999999999999999999999999999998 89999999999999999
Q ss_pred HHHHHHHHHHHh
Q 017264 87 ETAKVALEKGAS 98 (374)
Q Consensus 87 ~eA~~~~~~a~~ 98 (374)
++|...|++++.
T Consensus 272 ~~a~~~~r~al~ 283 (287)
T 3qou_A 272 DALASXYRRQLY 283 (287)
T ss_dssp CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999999998864
No 179
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=6.3e-08 Score=74.97 Aligned_cols=86 Identities=17% Similarity=0.183 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 35 ~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
.+..++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|++++.++|.+..+...++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999999999999999999999999998888888777
Q ss_pred HHHHhh
Q 017264 115 ERIAEE 120 (374)
Q Consensus 115 ~~l~~~ 120 (374)
..++..
T Consensus 83 ~~~~~~ 88 (118)
T 1elw_A 83 EFLNRF 88 (118)
T ss_dssp HHTTCH
T ss_pred HHHhhH
Confidence 655443
No 180
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.78 E-value=2e-08 Score=96.23 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPS------MSKA 72 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~------~~~a 72 (374)
+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+++++.+.+. ...+
T Consensus 266 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 345 (411)
T 4a1s_A 266 NSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARA 345 (411)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHH
Confidence 3445555555555555555555555543322 344555555555555555555555555544321 1334
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 73 YWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
++.+|.+|..+|++++|+.+|++++++.
T Consensus 346 ~~~la~~~~~~g~~~~A~~~~~~al~~~ 373 (411)
T 4a1s_A 346 CWSLGNAHSAIGGHERALKYAEQHLQLA 373 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5555555555555555555555555444
No 181
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.78 E-value=2.3e-08 Score=95.05 Aligned_cols=118 Identities=13% Similarity=0.143 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------~ 70 (374)
..+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+.+++.+.+.. .
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 307 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEG 307 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 356788899999999999999999999886655 6788889999999999999999999999886543 6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHHHHHhh
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAPGD------SRFTNLIKECEERIAEE 120 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~------~~~~~~~~~~~~~l~~~ 120 (374)
.+++.+|.+|..+|++++|+.+|++++++.+.. ......++.+...++..
T Consensus 308 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 308 RACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHh
Confidence 688899999999999999999999988874332 23444555555555543
No 182
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.78 E-value=1.9e-08 Score=85.75 Aligned_cols=82 Identities=10% Similarity=-0.023 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHhcCHHHHHHHHH
Q 017264 17 YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM--SKAYWRKATACMKLEEYETAKVALE 94 (374)
Q Consensus 17 ~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~--~~a~~~lg~~~~~lg~~~eA~~~~~ 94 (374)
....|+..|.+++..+|+++.+++.+|.+|..+|++++|+..|.+++.++|.. ..+++.+|.++..+|++++|+.+|+
T Consensus 89 ~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~ 168 (176)
T 2r5s_A 89 AESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYR 168 (176)
T ss_dssp TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 33456788888889999999999999999999999999999999999999976 6699999999999999999999999
Q ss_pred HHHh
Q 017264 95 KGAS 98 (374)
Q Consensus 95 ~a~~ 98 (374)
+++.
T Consensus 169 ~al~ 172 (176)
T 2r5s_A 169 RQLY 172 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8863
No 183
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.78 E-value=4.7e-08 Score=99.61 Aligned_cols=113 Identities=9% Similarity=-0.039 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHhcc--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATA 79 (374)
Q Consensus 3 ~~l~~~g~~~~~~~--~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~-~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 79 (374)
..+..++-.+...+ +|++|+..|+++|+.+|.+..+|..|+.++.+++ .++++++++.++|+++|.+..+|+.+|.+
T Consensus 108 ~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 108 GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 35678888899999 7799999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHh--------------cCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 80 CMKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 80 ~~~l--------------g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
+..+ +.+++|++++.+++.++|++..+...++.+..
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~ 237 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHS
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHh
Confidence 9986 67899999999999999999998888877743
No 184
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.77 E-value=4.9e-08 Score=86.13 Aligned_cols=109 Identities=15% Similarity=0.037 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc----CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ----NFTEAVADANRAIELEPSMSKAYWRKA 77 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~----~~~~Al~~~~~al~l~p~~~~a~~~lg 77 (374)
+..++..|..++..+++++|+.+|.++++. .++.+++++|.+|.. + ++.+|+.+|++++. +.++.+++++|
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg 92 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLA 92 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHH
Confidence 356788899999999999999999999875 578889999999887 6 89999999999865 46888899999
Q ss_pred HHHHH----hcCHHHHHHHHHHHHhcCCC--ChhHHHHHHHHHH
Q 017264 78 TACMK----LEEYETAKVALEKGASLAPG--DSRFTNLIKECEE 115 (374)
Q Consensus 78 ~~~~~----lg~~~eA~~~~~~a~~l~p~--~~~~~~~~~~~~~ 115 (374)
.+|.. .+++.+|+.+|+++.+..+. +......+..+..
T Consensus 93 ~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~ 136 (212)
T 3rjv_A 93 RVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYA 136 (212)
T ss_dssp HHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 99887 88999999999999888773 3555555555543
No 185
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.76 E-value=3.1e-08 Score=94.85 Aligned_cols=118 Identities=14% Similarity=0.030 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC------C
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPN-------SAELFADRAQASIKLQNFTEAVADANRAIELEP------S 68 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~-------~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p------~ 68 (374)
+..+...|..++..|+++.|+.+|.+|+...+. .+.++.++|.+|..+|++++|+..+.+|+.+.+ .
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~ 220 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRF 220 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 345678888999999999999999999887432 245778899999999999999999999998743 2
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----cCCCChhHHHHHHHHHHHHHh
Q 017264 69 MSKAYWRKATACMKLEEYETAKVALEKGAS-----LAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 69 ~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~-----l~p~~~~~~~~~~~~~~~l~~ 119 (374)
...+++++|.+|..+|++++|+.+|++++. .+|....+...++.+...+++
T Consensus 221 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~ 276 (378)
T 3q15_A 221 IAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQ 276 (378)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCC
Confidence 356788899999999999999999999988 566655566666666655444
No 186
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=5.8e-08 Score=78.79 Aligned_cols=90 Identities=19% Similarity=0.249 Sum_probs=82.0
Q ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 31 ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM---SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 31 ~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~---~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
..+.+...++.+|.+++..|++.+|+..|++++.++|++ ..+++.+|.+|+.+|+|++|+.+|+++++++|++..+.
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 457789999999999999999999999999999999987 89999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhh
Q 017264 108 NLIKECEERIAEE 120 (374)
Q Consensus 108 ~~~~~~~~~l~~~ 120 (374)
..++.+...++..
T Consensus 103 ~~~a~~~~~~~~~ 115 (148)
T 2dba_A 103 YRRSQALEKLGRL 115 (148)
T ss_dssp HHHHHHHHHHTCH
T ss_pred HHHHHHHHHcCCH
Confidence 8888777665443
No 187
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.75 E-value=5.7e-08 Score=85.70 Aligned_cols=108 Identities=14% Similarity=-0.011 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhcc----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC--CCHHH
Q 017264 3 TDLEKKAKEAFIDD----YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEP--SMSKA 72 (374)
Q Consensus 3 ~~l~~~g~~~~~~~----~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p--~~~~a 72 (374)
..++..|..++. + ++++|+.+|.++++ +.++.+++++|.+|.. .+++.+|+..|++++.+++ .++.+
T Consensus 51 ~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a 127 (212)
T 3rjv_A 51 DALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDA 127 (212)
T ss_dssp HHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHH
Confidence 456778888887 6 89999999999966 5678899999999987 7899999999999998887 45889
Q ss_pred HHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 73 YWRKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 73 ~~~lg~~~~~----lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
++.+|.+|.. .+++++|+.+|+++..+ +.+......+..+.
T Consensus 128 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y 172 (212)
T 3rjv_A 128 QMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMF 172 (212)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHH
Confidence 9999999998 88899999999999888 55565666665554
No 188
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.74 E-value=5e-08 Score=96.04 Aligned_cols=109 Identities=11% Similarity=0.145 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC--
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS-- 68 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~-- 68 (374)
.....+......|+|++|+.+|.++|.+ .|++ +..+.++|.+|..+|+|++|+..+++++.+ .++
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3444555556678999999999999996 4555 567899999999999999999999999975 344
Q ss_pred -CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCChhHHHHHHH
Q 017264 69 -MSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIKE 112 (374)
Q Consensus 69 -~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l-----~p~~~~~~~~~~~ 112 (374)
.+..+.++|.+|..+|+|++|+..|++++.+ .|+++........
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 4567899999999999999999999999874 6888876654443
No 189
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.74 E-value=7.6e-08 Score=75.70 Aligned_cols=82 Identities=10% Similarity=-0.038 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS--MSKAYWRKATAC 80 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~--~~~a~~~lg~~~ 80 (374)
..++..|..++..|+|++|+..|.+++..+|.+..+++.+|.+|..+|++++|+..|++++.+.|. +..++..+...+
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999874 444445555554
Q ss_pred HHhc
Q 017264 81 MKLE 84 (374)
Q Consensus 81 ~~lg 84 (374)
..++
T Consensus 100 ~~l~ 103 (115)
T 2kat_A 100 RRLA 103 (115)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 4444
No 190
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.73 E-value=1.5e-07 Score=74.91 Aligned_cols=80 Identities=14% Similarity=0.043 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS---AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 79 (374)
..++..|..++..|+|++|+..|.+++..+|++ +.+++.+|.+|..+|++++|+..+++++...|++..+...+..+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l 119 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERL 119 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 467889999999999999999999999999999 89999999999999999999999999999999998776655554
Q ss_pred HHH
Q 017264 80 CMK 82 (374)
Q Consensus 80 ~~~ 82 (374)
..-
T Consensus 120 ~~l 122 (129)
T 2xev_A 120 QSI 122 (129)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 191
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.73 E-value=7e-08 Score=89.08 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 33 PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 33 p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
|.++..+..+|.+|+..|+|++|+..|.+++.++|++..+++++|.+|+.+|+|++|+..|+++++++|++..+...++.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999988888877
Q ss_pred HHHHHHh
Q 017264 113 CEERIAE 119 (374)
Q Consensus 113 ~~~~l~~ 119 (374)
+...+++
T Consensus 81 ~~~~~g~ 87 (281)
T 2c2l_A 81 CQLEMES 87 (281)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 7665443
No 192
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.72 E-value=2.6e-07 Score=87.53 Aligned_cols=110 Identities=9% Similarity=-0.031 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhcc--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDD--YFELAYDLYSQAIEISPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 4 ~l~~~g~~~~~~~--~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~-~~~Al~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
.+..++..+...+ +|++++..++++|..+|.|..++..|+.++..++. ++++++++.++|.++|.+..+|..++.++
T Consensus 110 aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll 189 (331)
T 3dss_A 110 TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLL 189 (331)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 4566777777777 48899999999999999999999999999988888 58999999999999999999999999988
Q ss_pred HHh--------------cCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 81 MKL--------------EEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 81 ~~l--------------g~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
..+ +.+++++.++.+++..+|+|..+...+.-+
T Consensus 190 ~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 190 PQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 887 568899999999999999998877655433
No 193
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.69 E-value=1.7e-07 Score=73.32 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEIS-------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~-------p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~ 74 (374)
++..+..|..++..++|..|+..|..|++.. .....++..+|.||+++|+++.|+..+++++.++|++..++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3455666666666666666666666666652 123455555566666666666666655666555555555544
Q ss_pred HHH
Q 017264 75 RKA 77 (374)
Q Consensus 75 ~lg 77 (374)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 444
No 194
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.69 E-value=5.8e-08 Score=83.36 Aligned_cols=117 Identities=9% Similarity=0.107 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI---SPNS----AELFADRAQASIKLQNFTEAVADANRAIELEPS------M 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~---~p~~----~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~------~ 69 (374)
..+...|..++..|+|++|+.+|.+++.. .+++ ..++.++|.+|..+|++++|+..+.+++.+.+. .
T Consensus 67 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 146 (203)
T 3gw4_A 67 RALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAI 146 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHH
Confidence 45778999999999999999999999998 4422 567899999999999999999999999977432 2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
..++..+|.++..+|++++|+.+|++++.+...... ..+...+...+...
T Consensus 147 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 147 ACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED-SEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHhcccch
Confidence 345789999999999999999999999987543221 23444444444443
No 195
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.68 E-value=2.6e-08 Score=91.45 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC------H
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELEPSM------S 70 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~------~ 70 (374)
..+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+.+++.+.+.. .
T Consensus 184 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 263 (338)
T 3ro2_A 184 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 263 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 356788999999999999999999999885432 3488999999999999999999999999887654 7
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
.+++.+|.++..+|++++|+.+|++++.+.+.
T Consensus 264 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 264 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999887653
No 196
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.68 E-value=2.1e-07 Score=75.17 Aligned_cols=109 Identities=10% Similarity=0.042 Sum_probs=94.5
Q ss_pred HHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHhcC
Q 017264 11 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTE---AVADANRAIELE-P-SMSKAYWRKATACMKLEE 85 (374)
Q Consensus 11 ~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~---Al~~~~~al~l~-p-~~~~a~~~lg~~~~~lg~ 85 (374)
..........+...|.+++..++.+....+++|.|+.+..+... ++..++..+..+ | ...+++|.+|+.++++|+
T Consensus 10 ~~~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~ 89 (126)
T 1nzn_A 10 ELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKE 89 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhh
Confidence 33444556778888999988888899999999999999877666 999999888877 5 577899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 017264 86 YETAKVALEKGASLAPGDSRFTNLIKECEERIAE 119 (374)
Q Consensus 86 ~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~ 119 (374)
|.+|+.+++.+++.+|+|..+......++.++..
T Consensus 90 Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 90 YEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888888877754
No 197
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.68 E-value=4.4e-07 Score=86.50 Aligned_cols=112 Identities=7% Similarity=0.014 Sum_probs=100.9
Q ss_pred HHHHHhccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-c-
Q 017264 9 AKEAFIDDY-FELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKL-E- 84 (374)
Q Consensus 9 g~~~~~~~~-y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~-~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l-g- 84 (374)
-...+..+. .++|+.+++++|.++|.+..++..|+.++..++ .+++++..+..++..+|.+..+|..++.++..+ +
T Consensus 60 ~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 60 FRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQ 139 (349)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCC
Confidence 334444444 478999999999999999999999999999999 599999999999999999999999999999998 8
Q ss_pred CHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 85 EYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 85 ~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
++++++.++.++++++|.|..+......+...++..
T Consensus 140 ~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~ 175 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTL 175 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 999999999999999999999888888887777764
No 198
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.67 E-value=5.9e-07 Score=85.14 Aligned_cols=114 Identities=5% Similarity=-0.034 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhccC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC--HHHHHHHHHHHHHhCCCCHH
Q 017264 4 DLEKKAKEAFIDDY----------FELAYDLYSQAIEISPNSAELFADRAQASIKLQN--FTEAVADANRAIELEPSMSK 71 (374)
Q Consensus 4 ~l~~~g~~~~~~~~----------y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~--~~~Al~~~~~al~l~p~~~~ 71 (374)
.+..++..+...+. +.+++..++.+|..+|.+..++..|+.++..++. +++++..+.+++.++|.+..
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~ 145 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFH 145 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHH
Confidence 34556666655544 7899999999999999999999999999999994 99999999999999999999
Q ss_pred HHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 72 AYWRKATACMKLEE-YETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 72 a~~~lg~~~~~lg~-~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
+|..++.++..+|. +++++.++.++++.+|.|..+......+...+
T Consensus 146 AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 146 CWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999 69999999999999999999988888886655
No 199
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.65 E-value=2.1e-07 Score=91.59 Aligned_cols=109 Identities=17% Similarity=0.101 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC-
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS- 68 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~- 68 (374)
+.+......+..+|+|++|+.+|.++|.. .+++ ...+.++|.+|..+|+|++|+..+++++.+ .++
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 34566677788999999999999999986 3444 578899999999999999999999999965 344
Q ss_pred --CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCChhHHHHHH
Q 017264 69 --MSKAYWRKATACMKLEEYETAKVALEKGASL-----APGDSRFTNLIK 111 (374)
Q Consensus 69 --~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l-----~p~~~~~~~~~~ 111 (374)
.+..++++|.+|..+|+|++|+..|++++.+ .|+++.....+.
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~ 417 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLIL 417 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 4567899999999999999999999999864 788886555433
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.65 E-value=4.1e-07 Score=71.01 Aligned_cols=86 Identities=15% Similarity=0.060 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHH
Q 017264 35 SAELFADRAQASIKLQNFTEAVADANRAIELE-------PSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFT 107 (374)
Q Consensus 35 ~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~-------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~ 107 (374)
++.-++.+|..++..++|..|+..++.|+.+. .....++..+|.+++.+|+++.|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 45678899999999999999999999999863 34678999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhh
Q 017264 108 NLIKECEERIAEE 120 (374)
Q Consensus 108 ~~~~~~~~~l~~~ 120 (374)
..+...+..+...
T Consensus 84 ~n~~~~~~~~~~~ 96 (104)
T 2v5f_A 84 GNLKYFEYIMAKE 96 (104)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhc
Confidence 8887666655543
No 201
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.64 E-value=8.8e-08 Score=75.59 Aligned_cols=84 Identities=15% Similarity=0.168 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------hhHH
Q 017264 35 SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGD-------SRFT 107 (374)
Q Consensus 35 ~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~-------~~~~ 107 (374)
.+..++.+|.++...|++++|+..+.+++.++|.+..+++.+|.+++.+|++++|+.+|++++.+.|.+ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 357789999999999999999999999999999999999999999999999999999999999998876 5555
Q ss_pred HHHHHHHHHHH
Q 017264 108 NLIKECEERIA 118 (374)
Q Consensus 108 ~~~~~~~~~l~ 118 (374)
..++.+...++
T Consensus 83 ~~la~~~~~~~ 93 (131)
T 1elr_A 83 ARIGNSYFKEE 93 (131)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 55565554443
No 202
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.60 E-value=3.3e-07 Score=87.41 Aligned_cols=108 Identities=7% Similarity=-0.028 Sum_probs=58.8
Q ss_pred HHHHHHHHhc-c-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHH--------HHHHHHHHHHHhCCCCHHHHHH
Q 017264 6 EKKAKEAFID-D-YFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFT--------EAVADANRAIELEPSMSKAYWR 75 (374)
Q Consensus 6 ~~~g~~~~~~-~-~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~--------~Al~~~~~al~l~p~~~~a~~~ 75 (374)
..++..+... + ++++++.+++++|..+|.|..++..|+.++.+++.++ ++++.+.+++.++|.+..+|..
T Consensus 127 ~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~ 206 (349)
T 3q7a_A 127 HHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGW 206 (349)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3344444443 3 4555555555555555555555555555555555554 5555555555555555555555
Q ss_pred HHHHHHHhcC-------HHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 76 KATACMKLEE-------YETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 76 lg~~~~~lg~-------~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
++.++..+++ +++++.++.+++.++|+|..+...+..+
T Consensus 207 R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~L 251 (349)
T 3q7a_A 207 RWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGF 251 (349)
T ss_dssp HHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5555555554 4555555555555555555555554444
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.57 E-value=9.3e-08 Score=88.47 Aligned_cols=114 Identities=11% Similarity=0.024 Sum_probs=95.3
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-C-HHHHHHHHHHHHHh
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-M-SKAYWRKATACMKL 83 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~-~-~~a~~~lg~~~~~l 83 (374)
...|..+...|+|++|.++|..++...|.+. +++.+|.++++.++|.+|+..|..++...+. . ..+++.+|.++..+
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~L 184 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANL 184 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHC
Confidence 4678889999999999999999999999888 9999999999999999999999977765322 1 45899999999999
Q ss_pred cCHHHHHHHHHHHHhcC--CC-ChhHHHHHHHHHHHHHhh
Q 017264 84 EEYETAKVALEKGASLA--PG-DSRFTNLIKECEERIAEE 120 (374)
Q Consensus 84 g~~~eA~~~~~~a~~l~--p~-~~~~~~~~~~~~~~l~~~ 120 (374)
|++++|+.+|+++.... |. .......++.|..+++..
T Consensus 185 G~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~ 224 (282)
T 4f3v_A 185 ALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE 224 (282)
T ss_dssp TCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH
Confidence 99999999999998544 44 344666677776665554
No 204
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.57 E-value=3.7e-07 Score=91.44 Aligned_cols=112 Identities=10% Similarity=-0.021 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-H
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA-ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATAC-M 81 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~-~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~-~ 81 (374)
.+...|..+...|++++|+..|.++|...|.++ .+|..++.++.++|++++|+..|.+|++..|.....++..+.+. .
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~ 402 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 402 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 456778888899999999999999999999885 58999999998999999999999999998888777777776653 4
Q ss_pred HhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 82 KLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 82 ~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
..|++++|..+|+++++..|++..+...+..+..
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 5899999999999999999988877666665543
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.54 E-value=1.2e-06 Score=71.99 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=80.0
Q ss_pred HHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-
Q 017264 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRKATACMK- 82 (374)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~- 82 (374)
.|..++..+.+++|+.+|.++++. .++.+++++|.+|.. .+++.+|+.+|++|+.. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G 106 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAG 106 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCC
Confidence 677788888889999999999887 678999999999998 89999999999999987 678999999999999
Q ss_pred ---hcCHHHHHHHHHHHHhcC
Q 017264 83 ---LEEYETAKVALEKGASLA 100 (374)
Q Consensus 83 ---lg~~~eA~~~~~~a~~l~ 100 (374)
.+++++|+.+|+++.++.
T Consensus 107 ~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 107 KGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHCC
Confidence 899999999999998874
No 206
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.53 E-value=1.7e-06 Score=82.60 Aligned_cols=101 Identities=20% Similarity=0.138 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--------------------------------
Q 017264 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASI-------------------------------- 47 (374)
Q Consensus 3 ~~l~~~g~~~~~~~---~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~-------------------------------- 47 (374)
-.++-+|..++..+ ++.+|+.+|.+|++++|+++.++..++.||.
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~ 276 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcC
Confidence 35677788777654 4689999999999999999888887666652
Q ss_pred ------------HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 48 ------------KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 48 ------------~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
..|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|++++|..+
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 247778888888888888764 56777788888888888888888888888888765
No 207
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.50 E-value=1.2e-06 Score=87.85 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=93.5
Q ss_pred HHHHHHHHHHh-------ccCHH-------HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 017264 4 DLEKKAKEAFI-------DDYFE-------LAYDLYSQAIE-ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (374)
Q Consensus 4 ~l~~~g~~~~~-------~~~y~-------~Al~~y~~aL~-~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~ 68 (374)
.+...|..+.. .|+++ +|+..|.+|+. ..|.+..++..+|.++.++|++++|+..|++++.+.|.
T Consensus 274 ~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 353 (530)
T 2ooe_A 274 IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI 353 (530)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc
Confidence 45566777765 68887 99999999998 79999999999999999999999999999999999998
Q ss_pred CH-HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHH
Q 017264 69 MS-KAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (374)
Q Consensus 69 ~~-~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~ 108 (374)
++ .+|+.+|.++.+.|++++|+..|+++++..|....+..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~ 394 (530)
T 2ooe_A 354 DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 394 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHH
Confidence 85 69999999999999999999999999999887654433
No 208
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.43 E-value=1.1e-06 Score=83.31 Aligned_cols=99 Identities=9% Similarity=0.045 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCC
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFADRAQASIKLQNFTEAVADANRAIELE--------PSM 69 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~--------p~~ 69 (374)
.+...|..++..|+|++|+.+|.+++...+.. ..++..+|.+|..+|++++|+..+++++.+. |..
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 34566677777777777777777777664322 2335667777777777777777777777654 223
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
..++..+|.+++..|++++|..+|++++.+.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 455666777777777777777777777776654
No 209
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.40 E-value=1.8e-06 Score=81.72 Aligned_cols=97 Identities=20% Similarity=0.226 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-----CH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEIS--------PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-----MS 70 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~--------p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~-----~~ 70 (374)
.+...|..++..|+|++|+.+|.+++... |....++.++|.+|..+|++++|+..+.+++.+.+. ..
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 174 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL 174 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHH
Confidence 35678999999999999999999999974 334567888999999999999999999999999875 34
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
.+++.+|.++...|++++|..+|++++.+.
T Consensus 175 ~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 175 QCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 678899999999999999999999998774
No 210
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.37 E-value=2.5e-06 Score=84.46 Aligned_cols=104 Identities=12% Similarity=-0.009 Sum_probs=76.6
Q ss_pred HHHHHHHHHHhcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 017264 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYWRK 76 (374)
Q Consensus 4 ~l~~~g~~~~~~~---~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p~~~~a~~~l 76 (374)
.+...|..++..| ++++|+.+|.++++. .++.+++++|.+|.. .+++++|+..|++|+..+ ++.+++++
T Consensus 330 a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~L 405 (490)
T 2xm6_A 330 AQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQL 405 (490)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHH
Confidence 4566677776644 778888888888776 567788888888877 778888888888887754 57788888
Q ss_pred HHHHHH----hcCHHHHHHHHHHHHhcCCC---ChhHHHHHH
Q 017264 77 ATACMK----LEEYETAKVALEKGASLAPG---DSRFTNLIK 111 (374)
Q Consensus 77 g~~~~~----lg~~~eA~~~~~~a~~l~p~---~~~~~~~~~ 111 (374)
|.+|+. .+++++|+.+|++++..+|+ +.....++.
T Consensus 406 g~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~a~~~l~ 447 (490)
T 2xm6_A 406 GEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEK 447 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHHHHHHHH
Confidence 888887 78888888888888887743 554444443
No 211
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.31 E-value=9.8e-07 Score=88.18 Aligned_cols=99 Identities=11% Similarity=0.014 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~ 68 (374)
+..+.+.|..+...|+|++|+.+|.++|.. .+++ +..+.++|.+|..+|+|++|+..+.+|+.+ +|+
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 456789999999999999999999999987 3444 578999999999999999999999999975 566
Q ss_pred C---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 69 M---SKAYWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 69 ~---~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
+ .+..-.++.++..++.|.+|...|.++.+..
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4456688999999999999999998875433
No 212
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.31 E-value=3.6e-06 Score=77.59 Aligned_cols=86 Identities=12% Similarity=0.093 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-hcCHHH
Q 017264 18 FELAYDLYSQAIEISPN--SAELFADRAQASIKL-----QNFTEAVADANRAIELEPSM-SKAYWRKATACMK-LEEYET 88 (374)
Q Consensus 18 y~~Al~~y~~aL~~~p~--~~~~~~~ra~~~~~l-----~~~~~Al~~~~~al~l~p~~-~~a~~~lg~~~~~-lg~~~e 88 (374)
...|...+.+||+++|+ +..+|..+|..|.++ |+.++|.++|++|++++|+. ..+++.+|..++. .|++++
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~ 258 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAG 258 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHH
Confidence 47899999999999999 667999999999996 99999999999999999975 9999999999988 599999
Q ss_pred HHHHHHHHHhcCCCC
Q 017264 89 AKVALEKGASLAPGD 103 (374)
Q Consensus 89 A~~~~~~a~~l~p~~ 103 (374)
|..+|++++...|..
T Consensus 259 a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 259 FDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999988874
No 213
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.31 E-value=1.5e-05 Score=78.79 Aligned_cols=106 Identities=10% Similarity=-0.021 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHh----ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHH
Q 017264 3 TDLEKKAKEAFI----DDYFELAYDLYSQAIEISPNSAELFADRAQASIK----LQNFTEAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 3 ~~l~~~g~~~~~----~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~----l~~~~~Al~~~~~al~l~p~~~~a~~ 74 (374)
+.++..|..++. .+++++|+.+|.++++. .++.+++.+|.+|.. .+++++|+..|++++.. +++.+++
T Consensus 40 ~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~ 115 (490)
T 2xm6_A 40 KAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQ 115 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHH
Confidence 456677777777 78888888888888775 567788888888888 78888888888888765 4777888
Q ss_pred HHHHHHHH----hcCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 017264 75 RKATACMK----LEEYETAKVALEKGASLAPGDSRFTNLIKECE 114 (374)
Q Consensus 75 ~lg~~~~~----lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~ 114 (374)
++|.+|.. .+++++|+.+|+++.... +......++.+.
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a~~~Lg~~y 157 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAAEQG--RDSGQQSMGDAY 157 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH
Confidence 88888887 778888888888876653 455555554443
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.27 E-value=3.7e-06 Score=64.36 Aligned_cols=68 Identities=19% Similarity=0.146 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHhccC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 017264 2 ATDLEKKAKEAFIDDY---FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~---y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~ 69 (374)
++.+...|..++..++ .++|..++.++|.++|+++.+++.+|..+++.|+|.+|+..+++++..+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 3567788999976666 7999999999999999999999999999999999999999999999999874
No 215
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.27 E-value=9.1e-06 Score=65.79 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCHHHHHHHH
Q 017264 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVAL 93 (374)
Q Consensus 18 y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~---~~~Al~~~~~al~l~p-~~~~a~~~lg~~~~~lg~~~eA~~~~ 93 (374)
.....+.|.+-+ ...-++...+++|.|+.+..+ ..+++..++..+..+| ...+++|.+|++++++|+|.+|+.+.
T Consensus 23 L~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~ 101 (134)
T 3o48_A 23 LEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYV 101 (134)
T ss_dssp HHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344445554433 333357899999999999754 4579999999999888 46889999999999999999999999
Q ss_pred HHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 94 EKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 94 ~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+.+++..|+|..+......++.++.+.
T Consensus 102 d~lL~~eP~N~QA~~Lk~~Ie~ki~kd 128 (134)
T 3o48_A 102 DTLFEHERNNKQVGALKSMVEDKIQKE 128 (134)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999998888887653
No 216
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.27 E-value=7.4e-06 Score=80.74 Aligned_cols=107 Identities=12% Similarity=0.001 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhcc---CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 017264 4 DLEKKAKEAFIDD---YFELAYDLYSQAIEISPNSAELFADRAQASIKL----QNFTEAVADANRAIELEPSMSKAYWRK 76 (374)
Q Consensus 4 ~l~~~g~~~~~~~---~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l----~~~~~Al~~~~~al~l~p~~~~a~~~l 76 (374)
.++..|..+...| ++.+|+..|.+++...+..+..++++|.+|... +++.+|+..|++++ |+++.+++++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 4677888899999 999999999999999999999889999999766 79999999999998 8999999999
Q ss_pred HHH-H--HHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 77 ATA-C--MKLEEYETAKVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 77 g~~-~--~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
|.+ + ...+++++|+.+|+++.+.. +......++.+..
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH
Confidence 999 4 57899999999999998655 6777777776654
No 217
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.24 E-value=3.1e-05 Score=63.48 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=78.7
Q ss_pred CCCHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHH
Q 017264 33 PNSAELFADRAQASIKLQN---FTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTN 108 (374)
Q Consensus 33 p~~~~~~~~ra~~~~~l~~---~~~Al~~~~~al~l~p-~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~ 108 (374)
.-+....+++|.|+.+..+ ..+++..++..+...| ...+++|.+|+.++++|+|.+|+.+++.+++.+|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 4568999999999999865 4579999999999888 56789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 017264 109 LIKECEERIAEE 120 (374)
Q Consensus 109 ~~~~~~~~l~~~ 120 (374)
....++.++...
T Consensus 116 Lk~~Ie~~i~kd 127 (144)
T 1y8m_A 116 LKSMVEDKIQKE 127 (144)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999888888664
No 218
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.23 E-value=1.2e-05 Score=65.83 Aligned_cols=93 Identities=14% Similarity=0.018 Sum_probs=79.5
Q ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----hcCHHHHH
Q 017264 15 DDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK----LEEYETAK 90 (374)
Q Consensus 15 ~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~ 90 (374)
.+|+++|+.+|.++++..... +. +|.+|...+.+.+|+.+|++|+.. .++.+++++|.+|.. .+++.+|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMF--GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT--HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHh--hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 468999999999999987443 33 999999999999999999999987 689999999999999 99999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 91 VALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 91 ~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
.+|+++.+. .+......+..+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~ 104 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQY 104 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHH
Confidence 999999887 45666666666544
No 219
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.18 E-value=7.2e-06 Score=68.44 Aligned_cols=77 Identities=10% Similarity=0.028 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhcc---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDD---YFELAYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (374)
Q Consensus 3 ~~l~~~g~~~~~~~---~y~~Al~~y~~aL~~~-p-~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg 77 (374)
+..|+.|..+.+.+ +++++|.++...++.+ | .+.++++++|.+|+++++|.+|+++++++++++|++..+..-+.
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 56789999999988 7889999999999998 7 56899999999999999999999999999999999988766554
Q ss_pred HH
Q 017264 78 TA 79 (374)
Q Consensus 78 ~~ 79 (374)
.+
T Consensus 113 ~i 114 (152)
T 1pc2_A 113 LI 114 (152)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 220
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.16 E-value=1.4e-05 Score=78.75 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=59.3
Q ss_pred HHHHHHHHhc----cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 017264 6 EKKAKEAFID----DYFELAYDLYSQAIEISPNSAELFADRAQAS---IKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (374)
Q Consensus 6 ~~~g~~~~~~----~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~---~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~ 78 (374)
+..|..+... +++++|+.+|.+++ |.++.+++++|.+| ...+++.+|+.+|++++..+ ++.+++++|.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~ 291 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGK 291 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHH
Confidence 4555555444 56666666666665 56666666666663 34566666666666666443 5666666666
Q ss_pred HHHHhc-----CHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 79 ACMKLE-----EYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 79 ~~~~lg-----~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
+|. .| ++.+|+.+|+++. +.+......++.+
T Consensus 292 ~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~ 327 (452)
T 3e4b_A 292 LYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQI 327 (452)
T ss_dssp HHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHH
T ss_pred HHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHH
Confidence 665 44 6666666666665 5555555555444
No 221
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.04 E-value=2.8e-05 Score=65.43 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=83.7
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CC---
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNS---------AELFADRAQASIKLQNFTEAVADANRAIELEP---SM--- 69 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~---------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---~~--- 69 (374)
++.....++..+.|+.|+-+++.++....++ ..+++.+|.+++..++|.+|+..|.+||++.. ..
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6788999999999999999999987774333 34888999999999999999999999986531 11
Q ss_pred -------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 017264 70 -------------------SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKEC 113 (374)
Q Consensus 70 -------------------~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~ 113 (374)
.+..|++|.||..++++.+|+..++... .....+.+-..++++
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANL 164 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHH
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHH
Confidence 2688999999999999999999988532 222234444444444
No 222
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.02 E-value=4.3e-05 Score=71.47 Aligned_cols=99 Identities=11% Similarity=0.019 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----CHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP--NSAELFADRAQASIKLQNFTEAVADANRAIELEPS----MSKAYWRKA 77 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p--~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~----~~~a~~~lg 77 (374)
.+...|..++..|++++|+..|.+.|..+| .+.+++..++.+|.++|+.+.|...++++.+.+|+ .-.....++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 346788999999999999999999999987 78999999999999999999999999999999983 223445555
Q ss_pred HH--HHHhc--CHHHHHHHHHHHHhcCCC
Q 017264 78 TA--CMKLE--EYETAKVALEKGASLAPG 102 (374)
Q Consensus 78 ~~--~~~lg--~~~eA~~~~~~a~~l~p~ 102 (374)
.+ .+..| ++.+|...|+.+....|+
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 44 56566 999999999999888886
No 223
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.01 E-value=2.7e-05 Score=60.29 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=66.8
Q ss_pred CccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC-----C----------CeeeeccccccccccCceEEEE
Q 017264 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRYEV 239 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~----------~~y~~~~~L~~~I~p~~s~~~v 239 (374)
+++|+++++.+.|.+-++|+.++++.|.+.++.|.|+..... + ..|.-.+.|...|+++..+.+.
T Consensus 6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A~~ 85 (100)
T 3gla_A 6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAG 85 (100)
T ss_dssp CEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEEEE
T ss_pred cEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEEEE
Confidence 579999999999999999999999999999999999864321 1 1356678899999999999999
Q ss_pred cCcEEEEEEeecC
Q 017264 240 LSTKVEIRLAKAE 252 (374)
Q Consensus 240 ~~~kiei~L~K~~ 252 (374)
....++|+|.|..
T Consensus 86 ~~GvL~I~~pK~~ 98 (100)
T 3gla_A 86 RNGVLEIRIPKRP 98 (100)
T ss_dssp ETTEEEEEEEBC-
T ss_pred eCCEEEEEEecCC
Confidence 9999999999975
No 224
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.99 E-value=3.6e-05 Score=84.30 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------------
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---------------- 67 (374)
.+...|..++..|+|++|+.+|.+| ..|..+|.||.++|+|++|++.+++|.....
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~L 1268 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRL 1268 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHH
Confidence 5678999999999999999999996 4789999999999999999999988844332
Q ss_pred ---------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 68 ---------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 68 ---------~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
.+++.+..++..|..+|.|++|+..|++++.+++.+..+...+..+..+
T Consensus 1269 A~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1269 AQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 1344556777788899999999999999999998887776666655543
No 225
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=3.2e-05 Score=74.36 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELE------PSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
..++.++|.+|..+|+|.+|+..+..++... +....+++.+|.+|..+|+|.+|..+|++++...
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 3456677778888888888888887777652 2345677788888888888888888888877654
No 226
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.98 E-value=1.6e-05 Score=77.82 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------------
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---------------- 67 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---------------- 67 (374)
.+...|..++..|.|++|+.+|+++ ..|..+|.|+.++|+|++|++.+.+|. ++
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEF 193 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcH
Confidence 4567788888888888888888875 357888888888888888888888872 22
Q ss_pred -----------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Q 017264 68 -----------SMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEER 116 (374)
Q Consensus 68 -----------~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~ 116 (374)
.+++-...+..+|..+|++++|+..|++++.+++.+..+...++.+..+
T Consensus 194 ~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 194 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 1222233344678889999999999999999999998877777766653
No 227
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.96 E-value=7.9e-06 Score=66.09 Aligned_cols=82 Identities=16% Similarity=0.327 Sum_probs=70.1
Q ss_pred CccccccCCeEEEEEEeCCCC--CCceEEEEeeeEEEEEEEcCCCCeeeecccccccc-ccCc--eEEEEcCcEEEEEEe
Q 017264 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKI-IPAK--CRYEVLSTKVEIRLA 249 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I-~p~~--s~~~v~~~kiei~L~ 249 (374)
|+.=.|++++|+|.|.++.+. ..++.+.+.++.|.++.+ .|.|.+.|-|+| +.+. ++|......+.|+|.
T Consensus 5 ~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-----PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLp 79 (134)
T 2k8q_A 5 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 79 (134)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-----SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-----CeEEEecCCCeeecCCCcceeEeccCCEEEEEEe
Confidence 667789999999999999998 889999999999888865 799999999999 4444 456666679999999
Q ss_pred ecCC-CCCCcccc
Q 017264 250 KAEP-IQWSSLEF 261 (374)
Q Consensus 250 K~~~-~~W~~L~~ 261 (374)
|..+ +.|+.|.-
T Consensus 80 K~~~Ge~F~dLD~ 92 (134)
T 2k8q_A 80 KLNKNEYFEDLDL 92 (134)
T ss_dssp ESSTTCCCSSTTC
T ss_pred CCCCCCCCCCccc
Confidence 9986 68999974
No 228
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=97.92 E-value=6.6e-05 Score=58.40 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=68.0
Q ss_pred CccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCCCC----------eeeeccccccccccCceEEEEcCcEE
Q 017264 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPGEE----------AYHFQPRLFGKIIPAKCRYEVLSTKV 244 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~~~----------~y~~~~~L~~~I~p~~s~~~v~~~ki 244 (374)
.++|+++++.+.|.+.++|+.++++.|.+.++.|.|+....... .|.-.+.|...|+++..+.+.....+
T Consensus 8 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~GvL 87 (102)
T 4fei_A 8 AADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGGVL 87 (102)
T ss_dssp CEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETTEE
T ss_pred cEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECCEE
Confidence 57999999999999999999999999999999999986432111 36667789999999999999999999
Q ss_pred EEEEeecCC
Q 017264 245 EIRLAKAEP 253 (374)
Q Consensus 245 ei~L~K~~~ 253 (374)
+|+|.|.++
T Consensus 88 ~I~lpK~~~ 96 (102)
T 4fei_A 88 TVRFEKLRP 96 (102)
T ss_dssp EEEEEBSSC
T ss_pred EEEEEccCc
Confidence 999999764
No 229
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.92 E-value=4.1e-05 Score=71.62 Aligned_cols=99 Identities=8% Similarity=-0.018 Sum_probs=82.6
Q ss_pred HHHHHhcc--CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----------CCCCHHHHH
Q 017264 9 AKEAFIDD--YFELAYDLYSQAIEISPN--SAELFADRAQASIKLQNFTEAVADANRAIEL----------EPSMSKAYW 74 (374)
Q Consensus 9 g~~~~~~~--~y~~Al~~y~~aL~~~p~--~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l----------~p~~~~a~~ 74 (374)
|...+..| ++.+|+..|++++...|. ....+++ |++++|++++|..+++.++.+ +|+++.++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~La 259 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLA 259 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHH
Confidence 43355445 999999999999888886 3445555 899999999999999987776 588999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
++..+.+.+|+ +|.++++++.+++|+++-+.....+
T Consensus 260 N~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 260 NQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999998 8999999999999999976665544
No 230
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=97.78 E-value=0.0001 Score=59.38 Aligned_cols=79 Identities=13% Similarity=0.048 Sum_probs=68.2
Q ss_pred CccccccCCeEEEEEEeCCCCCCceEEEEee-eEEEEEEEcCCC---C--------eeeeccccccccccCce-EEEEcC
Q 017264 175 RHEFYQKPEEVVVTVFAKGIPAKNVTVDFGE-QILSVSIDVPGE---E--------AYHFQPRLFGKIIPAKC-RYEVLS 241 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~-~~l~v~~~~~~~---~--------~y~~~~~L~~~I~p~~s-~~~v~~ 241 (374)
.++|+++++.+.|.+.++|+.++++.|.+.+ +.|.|+...... . .|.-.+.|...|+++.. +.+...
T Consensus 26 ~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~~ 105 (123)
T 3aab_A 26 PVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYEN 105 (123)
T ss_dssp CEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEEET
T ss_pred cEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEcC
Confidence 5899999999999999999999999999999 999999764321 1 45666789999999998 888889
Q ss_pred cEEEEEEeecCC
Q 017264 242 TKVEIRLAKAEP 253 (374)
Q Consensus 242 ~kiei~L~K~~~ 253 (374)
.-+.|+|.|...
T Consensus 106 GvL~I~lPK~~~ 117 (123)
T 3aab_A 106 GVLTIRIPIAGT 117 (123)
T ss_dssp TEEEEEEEGGGE
T ss_pred CEEEEEEEcCCC
Confidence 999999999754
No 231
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.00011 Score=57.47 Aligned_cols=82 Identities=17% Similarity=0.351 Sum_probs=70.3
Q ss_pred CccccccCCeEEEEEEeCCCC--CCceEEEEeeeEEEEEEEcCCCCeeeeccccccccccCc---eEEEEcCcEEEEEEe
Q 017264 175 RHEFYQKPEEVVVTVFAKGIP--AKNVTVDFGEQILSVSIDVPGEEAYHFQPRLFGKIIPAK---CRYEVLSTKVEIRLA 249 (374)
Q Consensus 175 r~~W~Qt~~~V~i~i~~k~~~--~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~p~~---s~~~v~~~kiei~L~ 249 (374)
++.=.|++++|+|.|.++.+. ..++.+.+.++.+.+... +|.|.+.|-++|+.++ ++|.+....+.|+|.
T Consensus 19 ~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-----PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lp 93 (115)
T 3eud_A 19 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-----PYYLRLRFPHELIDDERSTAQYDSKDECINVKVA 93 (115)
T ss_dssp CEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-----TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEE
T ss_pred cEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-----CeEEEEecCcceecCCCcceEEeCCCcEEEEEEc
Confidence 678889999999999999877 679999999999998875 7999999999996544 478887889999999
Q ss_pred ecCC-CCCCcccc
Q 017264 250 KAEP-IQWSSLEF 261 (374)
Q Consensus 250 K~~~-~~W~~L~~ 261 (374)
|..+ +..+.|.-
T Consensus 94 K~~~GE~F~dLDm 106 (115)
T 3eud_A 94 KLNKNEYFEDLDL 106 (115)
T ss_dssp ESSTTCCCCCTTC
T ss_pred CCcCCCcCCCccc
Confidence 9986 67888763
No 232
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=9.5e-05 Score=71.02 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----C
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI------SPNSAELFADRAQASIKLQNFTEAVADANRAIELEP---S----M 69 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---~----~ 69 (374)
..+...|..++..|+|.+|+.++.+++.. .+....++..++.+|..+|+|.+|+..+.+++.+.+ . .
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 215 (434)
T 4b4t_Q 136 SLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTV 215 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHH
Confidence 34578899999999999999999999887 233367999999999999999999999999998753 2 2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
...+..+|.++...++|.+|..+|..+++.
T Consensus 216 ~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 216 AELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 456778899999999999999999998764
No 233
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.68 E-value=0.00019 Score=55.62 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=66.0
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC---CC-----CeeeeccccccccccCceEEEE-cCcEEEE
Q 017264 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (374)
Q Consensus 176 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei 246 (374)
.|++++++.+.|.+-++|+.++++.|.+..+.|.|+.... ++ .+|.-.+.|...|+++..+.++ ....+.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 5899999999999999999999999999999999987432 11 1255677899999999999999 6889999
Q ss_pred EEeecCC
Q 017264 247 RLAKAEP 253 (374)
Q Consensus 247 ~L~K~~~ 253 (374)
+|.|...
T Consensus 84 ~lPK~~~ 90 (101)
T 2wj5_A 84 QATPASA 90 (101)
T ss_dssp EECBCCC
T ss_pred EEECCCc
Confidence 9999653
No 234
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.67 E-value=0.00019 Score=78.69 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=64.8
Q ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 33 PNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 33 p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
.+.+.+|+++|.++...|++.+|+..|.+| +++.+|++.|.++.++|+|++|+.+|..+....++ +.+...++.
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e-~~Idt~Laf 1175 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIF 1175 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-ccccHHHHH
Confidence 356889999999999999999999999776 88899999999999999999999999999988744 223334555
Q ss_pred HHHHH
Q 017264 113 CEERI 117 (374)
Q Consensus 113 ~~~~l 117 (374)
+..++
T Consensus 1176 aYAKl 1180 (1630)
T 1xi4_A 1176 ALAKT 1180 (1630)
T ss_pred HHHhh
Confidence 54444
No 235
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.59 E-value=0.00027 Score=59.02 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=67.1
Q ss_pred cCccccccCCeEEEEEEeCCCCCCceEEEEe-eeEEEEEEEcCC-----C----------CeeeeccccccccccCceEE
Q 017264 174 YRHEFYQKPEEVVVTVFAKGIPAKNVTVDFG-EQILSVSIDVPG-----E----------EAYHFQPRLFGKIIPAKCRY 237 (374)
Q Consensus 174 ~r~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~-~~~l~v~~~~~~-----~----------~~y~~~~~L~~~I~p~~s~~ 237 (374)
.+++|+++++.+.|.+.++|+.+++|.|.+. .+.|.|+..... + ..|.-.+.|-..|+++..+.
T Consensus 44 p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 123 (151)
T 1gme_A 44 ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123 (151)
T ss_dssp GCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEE
Confidence 3689999999999999999999999999995 679999874321 1 13556778999999999999
Q ss_pred EEcCcEEEEEEeecCC
Q 017264 238 EVLSTKVEIRLAKAEP 253 (374)
Q Consensus 238 ~v~~~kiei~L~K~~~ 253 (374)
+.....++|+|.|...
T Consensus 124 ~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 124 GLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEETTEEEEEEECCCC
T ss_pred EEECCEEEEEEEccCc
Confidence 9999999999999753
No 236
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.58 E-value=0.00029 Score=59.48 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=67.2
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC-----C-----------CeeeeccccccccccCceEEEE
Q 017264 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG-----E-----------EAYHFQPRLFGKIIPAKCRYEV 239 (374)
Q Consensus 176 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~-----~-----------~~y~~~~~L~~~I~p~~s~~~v 239 (374)
++++++++.+.|.+.++|+.+++|.|.+.++.|.|+..... + ..|.-.+.|-..|+++..+.+.
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 79999999999999999999999999999999999875432 1 1455667899999999988889
Q ss_pred cCcEEEEEEeecCC
Q 017264 240 LSTKVEIRLAKAEP 253 (374)
Q Consensus 240 ~~~kiei~L~K~~~ 253 (374)
....++|+|-|.+.
T Consensus 139 ~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 139 ENGVLSVILPKAES 152 (161)
T ss_dssp ETTEEEEEEEBCGG
T ss_pred ECCEEEEEEEcCCC
Confidence 89999999999753
No 237
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.52 E-value=0.00015 Score=71.12 Aligned_cols=81 Identities=10% Similarity=0.003 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~ 68 (374)
+..+.+.|..+...|+|++|+.+|.++|.. .+++ +..++++|.+|..+|++++|+..+.+|+.+ +|+
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~ 408 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGRE 408 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 456788999999999999999999999987 3444 578999999999999999999999999975 566
Q ss_pred CHH---HHHHHHHHHHH
Q 017264 69 MSK---AYWRKATACMK 82 (374)
Q Consensus 69 ~~~---a~~~lg~~~~~ 82 (374)
++. .+.+++.+...
T Consensus 409 Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 409 HSLIEDLILLLEECDAN 425 (429)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 654 33445555433
No 238
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.46 E-value=0.00053 Score=55.16 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhccCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYFEL---AYDLYSQAIEIS-P-NSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKA 77 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~---Al~~y~~aL~~~-p-~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg 77 (374)
+..|+.|..+...++-.. +|.++...++.+ | ..-+.++.+|.+++++|+|.+|+++++.+|+..|++..+.-.+.
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 456888888988888766 999999998886 4 45689999999999999999999999999999999988765544
Q ss_pred HH
Q 017264 78 TA 79 (374)
Q Consensus 78 ~~ 79 (374)
.+
T Consensus 116 ~i 117 (126)
T 1nzn_A 116 LI 117 (126)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 239
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.43 E-value=0.0002 Score=70.25 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI-----SPNS---AELFADRAQASIKLQNFTEAVADANRAIEL-----EPS 68 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~-----~p~~---~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----~p~ 68 (374)
+..+.+.|..+...|+|++|+.+|.++|.. .+++ +..+.++|.+|..+|+|++|+..+++|+.+ +|+
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 456789999999999999999999999987 3444 578999999999999999999999999975 567
Q ss_pred CHHH
Q 017264 69 MSKA 72 (374)
Q Consensus 69 ~~~a 72 (374)
++..
T Consensus 420 Hp~~ 423 (433)
T 3qww_A 420 HPYI 423 (433)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 6643
No 240
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.40 E-value=0.0018 Score=59.58 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=65.4
Q ss_pred CCCCHHHHHHHHHHHHH---c--------cCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHh-----cCHHHHHHHH
Q 017264 32 SPNSAELFADRAQASIK---L--------QNFTEAVADANRAIELEPS--MSKAYWRKATACMKL-----EEYETAKVAL 93 (374)
Q Consensus 32 ~p~~~~~~~~ra~~~~~---l--------~~~~~Al~~~~~al~l~p~--~~~a~~~lg~~~~~l-----g~~~eA~~~~ 93 (374)
+|.++++++-.|..... + +....|...+++|++++|+ ++.+|..+|..|+.+ |+.+.|..+|
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~f 227 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAF 227 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHH
Confidence 55667788877777644 1 3456789999999999999 677999999999996 9999999999
Q ss_pred HHHHhcCCCC-hhHHHHHHH
Q 017264 94 EKGASLAPGD-SRFTNLIKE 112 (374)
Q Consensus 94 ~~a~~l~p~~-~~~~~~~~~ 112 (374)
+++++++|+. ......++.
T Consensus 228 erAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 228 EHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHhCCCCCchHHHHHHH
Confidence 9999999975 655554444
No 241
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.38 E-value=0.00061 Score=53.24 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=65.3
Q ss_pred cccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC---CC-----CeeeeccccccccccCceEEEE-cCcEEEEE
Q 017264 177 EFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIR 247 (374)
Q Consensus 177 ~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei~ 247 (374)
+++++++.+.|.+-++|+.++++.|.+..+.|.|+.... ++ ..|.-.+.|...|+++..+..+ ....+.|+
T Consensus 6 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~ 85 (106)
T 3l1e_A 6 EVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFS 85 (106)
T ss_dssp EEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEE
T ss_pred EEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEE
Confidence 688999999999999999999999999999999987421 11 1355667899999999999999 68899999
Q ss_pred EeecCC
Q 017264 248 LAKAEP 253 (374)
Q Consensus 248 L~K~~~ 253 (374)
|.|..+
T Consensus 86 ~PK~~~ 91 (106)
T 3l1e_A 86 GPKIPS 91 (106)
T ss_dssp EEBCCC
T ss_pred EEccCc
Confidence 999764
No 242
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.32 E-value=0.00064 Score=64.87 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=59.9
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYW 74 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~ 74 (374)
+...|..++..|++++|+..+++|+.++|+ ..+|..+|.++.-.|++++|+..|.+|++++|.....++
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 444566777789999999999999999975 778899999999999999999999999999998864333
No 243
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.31 E-value=0.0017 Score=48.45 Aligned_cols=73 Identities=7% Similarity=0.101 Sum_probs=62.0
Q ss_pred cccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC--------CCeeeeccccccccccCceEEEEc-CcEEEEEEe
Q 017264 179 YQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG--------EEAYHFQPRLFGKIIPAKCRYEVL-STKVEIRLA 249 (374)
Q Consensus 179 ~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~--------~~~y~~~~~L~~~I~p~~s~~~v~-~~kiei~L~ 249 (374)
+++++.+.|.+-++|+.+++|.|.+..+.|.|+..... ...|.-.+.|...|+++..+.++. ...+.|+|-
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 47899999999999999999999999999999875321 124666788999999999999998 789999998
Q ss_pred ec
Q 017264 250 KA 251 (374)
Q Consensus 250 K~ 251 (374)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 244
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.23 E-value=0.0046 Score=59.55 Aligned_cols=95 Identities=16% Similarity=0.045 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHccCHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS----------------------AELFADRAQASIKLQNFTEAVADANR 61 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~----------------------~~~~~~ra~~~~~l~~~~~Al~~~~~ 61 (374)
.+...|......++...|+..|.+||.+.... ..++..++.++..+|++.+|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45566777777899999999999999984221 13444567778889999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 62 AIELEPSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 62 al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
++..+|.+-.+|..+-.+|+..|+..+|+..|+.+.+
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998754
No 245
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.22 E-value=0.0025 Score=51.50 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhccCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y---~~Al~~y~~aL~~~p~-~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~ 78 (374)
+..|+.|-.+...++- ..+|.++...++.+|. .-+.++.+|.+++++|+|.+|+++++.+++..|++..+.-.+..
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 4567788888877654 5799999999999884 47899999999999999999999999999999999887655444
Q ss_pred H
Q 017264 79 A 79 (374)
Q Consensus 79 ~ 79 (374)
+
T Consensus 121 I 121 (134)
T 3o48_A 121 V 121 (134)
T ss_dssp H
T ss_pred H
Confidence 4
No 246
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.21 E-value=0.0039 Score=51.00 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHhccCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 017264 3 TDLEKKAKEAFIDDYF---ELAYDLYSQAIEISPN-SAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKAT 78 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y---~~Al~~y~~aL~~~p~-~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~ 78 (374)
+..|+.|-.+....+- ..+|.++...++..|. .-+.++.+|.+|+++|+|.+|+++++.+|+..|++..+.-.+..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 4567888888887765 5799999999999884 46889999999999999999999999999999999877554443
Q ss_pred H
Q 017264 79 A 79 (374)
Q Consensus 79 ~ 79 (374)
+
T Consensus 120 I 120 (144)
T 1y8m_A 120 V 120 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 247
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.15 E-value=0.0011 Score=50.19 Aligned_cols=74 Identities=11% Similarity=0.143 Sum_probs=58.3
Q ss_pred ccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcC---CC-----CeeeeccccccccccCceEEEE-cCcEEEEEEee
Q 017264 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVP---GE-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEIRLAK 250 (374)
Q Consensus 180 Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei~L~K 250 (374)
++++.+.|.+-++|+.++++.|.+..+.|.|+.... ++ .+|.-.+.|...|+++..+.++ ....+.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 467889999999999999999999999999987431 11 1355677899999999999999 68899999998
Q ss_pred cCC
Q 017264 251 AEP 253 (374)
Q Consensus 251 ~~~ 253 (374)
...
T Consensus 83 ~~~ 85 (90)
T 2y1y_A 83 KQV 85 (90)
T ss_dssp C--
T ss_pred CCC
Confidence 653
No 248
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.10 E-value=0.0017 Score=54.53 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHhCC---CC----------------------HHHHHHHHHHHHHccCHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISP---NS----------------------AELFADRAQASIKLQNFTEAV 56 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p---~~----------------------~~~~~~ra~~~~~l~~~~~Al 56 (374)
++.+...|+.+|..++|..|+..|.+||.+.. .+ .++.+.+|.||.+++++.+|+
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 34678899999999999999999999987621 11 278899999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 57 ADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 57 ~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
..++.. -.....++..+-+|..|
T Consensus 143 ~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 143 AILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHhcC-CchhcCHHHHHHHHHHh
Confidence 976332 12235677777777665
No 249
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.01 E-value=0.0012 Score=64.71 Aligned_cols=96 Identities=14% Similarity=0.049 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCC---------------------------CCHHHHHHHHHHHHHccCHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISP---------------------------NSAELFADRAQASIKLQNFTEAV 56 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p---------------------------~~~~~~~~ra~~~~~l~~~~~Al 56 (374)
.+...|..+++.|+|++|++.|.++. ++ .++.-+..+..+|.++|++++|+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai 227 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELI 227 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHH
Confidence 35678999999999999999999982 22 11222233447889999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHH--HHhcCHHHHHHHHHHHHhcCC
Q 017264 57 ADANRAIELEPSMSKAYWRKATAC--MKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 57 ~~~~~al~l~p~~~~a~~~lg~~~--~~lg~~~eA~~~~~~a~~l~p 101 (374)
..++.++.+++.+...+..+|++| |+.++..+++..|...+.+.+
T Consensus 228 ~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 228 TMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 999999999999999999999988 567888888888876655554
No 250
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.91 E-value=0.002 Score=55.02 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=62.4
Q ss_pred ccccccCCeEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC---C-----CeeeeccccccccccCceEEEE-cCcEEEE
Q 017264 176 HEFYQKPEEVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG---E-----EAYHFQPRLFGKIIPAKCRYEV-LSTKVEI 246 (374)
Q Consensus 176 ~~W~Qt~~~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~---~-----~~y~~~~~L~~~I~p~~s~~~v-~~~kiei 246 (374)
.+++++++.+.|.+-++|+.+++|.|++.++.|.|+..... + .+|.-.+.|-..|+++..+.++ ....++|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 48999999999999999999999999999999999874321 1 1255567899999999999999 5889999
Q ss_pred EEeecCC
Q 017264 247 RLAKAEP 253 (374)
Q Consensus 247 ~L~K~~~ 253 (374)
+|-|.+.
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999753
No 251
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.86 E-value=0.024 Score=46.83 Aligned_cols=101 Identities=17% Similarity=-0.010 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhccCH------HHHHHHHHHHHHhCCCC--------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 017264 4 DLEKKAKEAFIDDYF------ELAYDLYSQAIEISPNS--------AELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y------~~Al~~y~~aL~~~p~~--------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~ 69 (374)
.++.-...+-+.|+. +.-++.|.+|+..-|-. ..++.+.|. +..+++.++|.+.|..++.++..+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~hKkF 93 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARANCKKF 93 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHHCTTB
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHhHHH
Confidence 445556666666887 88889999999987654 345555553 356799999999999999998899
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR 105 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~ 105 (374)
+.+|+..|.--.+.|+...|...+.+++.+.|...+
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 999999999999999999999999999999997664
No 252
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.79 E-value=0.0093 Score=61.69 Aligned_cols=98 Identities=5% Similarity=-0.003 Sum_probs=82.1
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHccC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEI-SPNSAELFADRAQASIKLQN-FTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~-~p~~~~~~~~ra~~~~~l~~-~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
+...++.....++.+.|..+|.+|++. .+....+|...|....+.++ ++.|...|+++++..|..+..|..++..+..
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 344556666788999999999999987 44456777777777666654 8999999999999999999999899998899
Q ss_pred hcCHHHHHHHHHHHHhcCCC
Q 017264 83 LEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~ 102 (374)
.|+.+.|...|++++...|+
T Consensus 517 ~~~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 517 VNEESQVKSLFESSIDKISD 536 (679)
T ss_dssp HTCHHHHHHHHHHHTTTSSS
T ss_pred CCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999998874
No 253
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.65 E-value=0.01 Score=61.45 Aligned_cols=106 Identities=7% Similarity=0.022 Sum_probs=89.8
Q ss_pred HHHHHHHhc-cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHH
Q 017264 7 KKAKEAFID-DYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPS---MSKAYWRKATACMK 82 (374)
Q Consensus 7 ~~g~~~~~~-~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~---~~~a~~~lg~~~~~ 82 (374)
..|...+.. ++++.|..+|..+|+..|+++.++...+......|+.+.|...|++|+...|. ....|..+...-..
T Consensus 474 ~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~ 553 (679)
T 4e6h_A 474 ENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESK 553 (679)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 334444444 45999999999999999999999988999888999999999999999999883 55677777777788
Q ss_pred hcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 83 LEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
.|+.+.+...+.++.+..|++..+.....+
T Consensus 554 ~G~~~~~~~v~~R~~~~~P~~~~~~~f~~r 583 (679)
T 4e6h_A 554 VGSLNSVRTLEKRFFEKFPEVNKLEEFTNK 583 (679)
T ss_dssp TCCSHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 999999999999999999999877666554
No 254
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.49 E-value=0.01 Score=55.33 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=67.9
Q ss_pred CccccccCC----eEEEEEEeCCCCCCceEEEEeeeEEEEEEEcCC----C---CeeeeccccccccccCceEEEEc-Cc
Q 017264 175 RHEFYQKPE----EVVVTVFAKGIPAKNVTVDFGEQILSVSIDVPG----E---EAYHFQPRLFGKIIPAKCRYEVL-ST 242 (374)
Q Consensus 175 r~~W~Qt~~----~V~i~i~~k~~~~~~v~v~~~~~~l~v~~~~~~----~---~~y~~~~~L~~~I~p~~s~~~v~-~~ 242 (374)
..|.|++++ .+.|++-++|+.+++|.|.+..+.|.|+..... + ..|.-.+.|...|+++..+.++. ..
T Consensus 100 ~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nG 179 (314)
T 2bol_A 100 LKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDD 179 (314)
T ss_dssp GGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSS
T ss_pred ccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCC
Confidence 568889999 999999999999999999999999999875321 1 24677788999999999999999 88
Q ss_pred EEEEEEeecCC
Q 017264 243 KVEIRLAKAEP 253 (374)
Q Consensus 243 kiei~L~K~~~ 253 (374)
.+.|+|.|.++
T Consensus 180 VL~I~lPK~~~ 190 (314)
T 2bol_A 180 VLVIEAPVNEP 190 (314)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEeccCc
Confidence 99999999865
No 255
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.016 Score=60.42 Aligned_cols=80 Identities=18% Similarity=0.247 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHh--------CCCC----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 017264 18 FELAYDLYSQAIEI--------SPNS----------AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (374)
Q Consensus 18 y~~Al~~y~~aL~~--------~p~~----------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 79 (374)
--+|+.+..++|+. .+.+ ..++..-+..++..|+|+-|+..+.+|+.+.|.....|++|+.+
T Consensus 301 Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~v 380 (754)
T 4gns_B 301 ELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARC 380 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHH
Confidence 34577777777642 1222 23455557777788999999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 017264 80 CMKLEEYETAKVALEKGA 97 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~~a~ 97 (374)
|..+|+|+.|+-.+..+-
T Consensus 381 Yi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 381 HIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHTTCHHHHHHHHHHSC
T ss_pred HHHhccHHHHHHHHhcCC
Confidence 999999999998888763
No 256
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.94 E-value=0.12 Score=51.24 Aligned_cols=100 Identities=11% Similarity=-0.101 Sum_probs=65.4
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH---------------------------------------
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQA--------------------------------------- 45 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~--------------------------------------- 45 (374)
++..+..+...|+.+.|...|.+|+.. |.+..+++..+..
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~ 294 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLN 294 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHH
Confidence 455666677778888888888888888 7774433332221
Q ss_pred -HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCChhH
Q 017264 46 -SIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE-EYETAKVALEKGASLAPGDSRF 106 (374)
Q Consensus 46 -~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg-~~~eA~~~~~~a~~l~p~~~~~ 106 (374)
+.+.+..+.|...|.+| ...+.....|...|.+.+..+ +++.|...|+.+++..|+++.+
T Consensus 295 ~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~ 356 (493)
T 2uy1_A 295 YVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLL 356 (493)
T ss_dssp HHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHH
Confidence 22345667777777777 333334566666677666666 4788888888888777776654
No 257
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.67 E-value=0.16 Score=45.97 Aligned_cols=63 Identities=24% Similarity=0.233 Sum_probs=58.8
Q ss_pred HHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q 017264 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (374)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~ 71 (374)
...+++.++.++|+..+...|+.+|.++..+..+...++-.|++++|+..+..+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 457889999999999999999999999999999999999999999999999999999997644
No 258
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.88 E-value=0.38 Score=47.53 Aligned_cols=90 Identities=9% Similarity=-0.021 Sum_probs=74.1
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQ-NFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~-~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg 84 (374)
...+..+...++.+.|...|.+| ...+.....|...|......+ +++.|...|+.++...|+.+..+..++......|
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~ 368 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIG 368 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC
Confidence 34455555678899999999999 433345677777777777776 5999999999999999999998888888889999
Q ss_pred CHHHHHHHHHHH
Q 017264 85 EYETAKVALEKG 96 (374)
Q Consensus 85 ~~~eA~~~~~~a 96 (374)
+.+.|...|+++
T Consensus 369 ~~~~aR~l~er~ 380 (493)
T 2uy1_A 369 DEENARALFKRL 380 (493)
T ss_dssp CHHHHHHHHHHS
T ss_pred CHHHHHHHHHHH
Confidence 999999999987
No 259
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.78 E-value=0.28 Score=47.12 Aligned_cols=93 Identities=13% Similarity=0.005 Sum_probs=74.6
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---C----CHHHH
Q 017264 7 KKAKEAFIDDYFELAYDLYSQAIEISPN------SAELFADRAQASIKLQNFTEAVADANRAIELEP---S----MSKAY 73 (374)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~aL~~~p~------~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---~----~~~a~ 73 (374)
..|..++..|+|.+|+.++++.++.... ..+.+......|..++++..+...+..|..... . .+...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6899999999999999999998886222 146777888999999999999999988876541 2 23445
Q ss_pred HHHHHHHH-HhcCHHHHHHHHHHHHhc
Q 017264 74 WRKATACM-KLEEYETAKVALEKGASL 99 (374)
Q Consensus 74 ~~lg~~~~-~lg~~~eA~~~~~~a~~l 99 (374)
..-|.++. ..++|..|..+|-.+++.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 55688888 899999999999888743
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.70 E-value=0.091 Score=54.71 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=50.6
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVAD 58 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~ 58 (374)
|..++..+...|+|+-|+.+..+|+...|.....|+.+|.||..+|+|+.|+-.
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHH
Confidence 556889999999999999999999999999999999999999999999999854
No 261
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.58 E-value=0.71 Score=38.86 Aligned_cols=92 Identities=10% Similarity=-0.003 Sum_probs=70.6
Q ss_pred HHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----------------CCCCH
Q 017264 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL-----------------EPSMS 70 (374)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-----------------~p~~~ 70 (374)
.+-.++-.|.|..|+-++.. -+.....+..+.||.++++|..|+..++..+.- +|.+-
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 45567778888888877643 466788888899999999999999999988832 23444
Q ss_pred HHHH-HHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 71 KAYW-RKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 71 ~a~~-~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
+.++ .+|.++-..|+.++|+..|.......+--+
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~ 148 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFS 148 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccc
Confidence 4444 479999999999999999998887776433
No 262
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.48 E-value=0.27 Score=48.73 Aligned_cols=80 Identities=10% Similarity=0.001 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 38 LFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 38 ~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
.+..+|....-...+..|..+|.+|+.+.|+++..|..+|++....|+.-+|+.+|.+++-.....+.....+..+-.+.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence 34455666666677889999999999999999999999999999999999999999999877666676777776665544
No 263
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.31 E-value=0.77 Score=45.43 Aligned_cols=101 Identities=13% Similarity=0.064 Sum_probs=79.0
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEPS-MSKAYWRKATACMK 82 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~-p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~-~~~a~~~lg~~~~~ 82 (374)
+...-..+.+.|++++|+.+|.+..... .-+...|..+-.+|.+.|++++|...++.....+-. +...|..+-.+|.+
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~ 187 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhh
Confidence 3345567889999999999999877752 234777888888999999999999999998876532 45567778889999
Q ss_pred hcCHHHHHHHHHHHHh--cCCCChh
Q 017264 83 LEEYETAKVALEKGAS--LAPGDSR 105 (374)
Q Consensus 83 lg~~~eA~~~~~~a~~--l~p~~~~ 105 (374)
.|+.++|...|++..+ ..|+...
T Consensus 188 ~g~~d~A~~ll~~Mr~~g~~ps~~T 212 (501)
T 4g26_A 188 TKNADKVYKTLQRLRDLVRQVSKST 212 (501)
T ss_dssp TTCHHHHHHHHHHHHHHTSSBCHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcCHHH
Confidence 9999999999998765 3455443
No 264
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.73 E-value=0.33 Score=47.10 Aligned_cols=97 Identities=5% Similarity=-0.052 Sum_probs=77.1
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC--CC----HHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN---SAELFADRAQASIKLQNFTEAVADANRAIELEP--SM----SKAYWR 75 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~---~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p--~~----~~a~~~ 75 (374)
+...|..++..|+++.|++.|.++...... -..++.....+++..+++..+...+.++-.+.. .+ ......
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 467899999999999999999998887433 367888888888899999999999999876532 22 234445
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017264 76 KATACMKLEEYETAKVALEKGASLAP 101 (374)
Q Consensus 76 lg~~~~~lg~~~eA~~~~~~a~~l~p 101 (374)
.|.++...++|.+|...|-.++....
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhChHHHHHHHHHHHhccCC
Confidence 68888899999999998888765443
No 265
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.43 E-value=0.31 Score=44.11 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=59.3
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHH
Q 017264 45 ASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (374)
Q Consensus 45 ~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~ 109 (374)
.+++.+++.+|++.+...++.+|.+......+.+.|+-.|+++.|...++.+.+++|+.......
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999987765434
No 266
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.15 E-value=0.42 Score=47.36 Aligned_cols=78 Identities=15% Similarity=0.090 Sum_probs=67.9
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMK 82 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~ 82 (374)
+...|+..--...+..|..+|.+|+.+.|.+...|..+|.++...|+.-+|+-+|-+++....-++.+.-++...+-.
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 567788888888899999999999999999999999999999999999999999999997766677777777666653
No 267
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.67 E-value=0.45 Score=45.47 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=54.5
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~ 64 (374)
+...+..+...|++.+|+..+..++..+|.+-.++..+..+|++.|+..+|+..|+++-.
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 445677888999999999999999999999999999999999999999999999987654
No 268
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=92.04 E-value=1 Score=37.09 Aligned_cols=73 Identities=16% Similarity=0.012 Sum_probs=60.1
Q ss_pred HHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Q 017264 11 EAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLE 84 (374)
Q Consensus 11 ~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg 84 (374)
.+...+|.+.|.+.|+.++......+.++...|..-.+.|+...|...+.+|+.+.|.... .+..|+.-.+.|
T Consensus 69 ~~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~-~le~a~~nl~~~ 141 (161)
T 4h7y_A 69 ELKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE-MLEIALRNLNLQ 141 (161)
T ss_dssp HHHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH-HHHHHHHHHHTT
T ss_pred HHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH-HHHHHHHhhhcC
Confidence 3356689999999999999998888999999999999999999999999999999998654 344444444444
No 269
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=91.36 E-value=0.6 Score=43.30 Aligned_cols=71 Identities=10% Similarity=-0.027 Sum_probs=57.3
Q ss_pred cCCeEEEEEEe-CCCCCCceEEEEeeeEEEEEEEcCCC-----------CeeeeccccccccccCceEEEEcCcEEEEEE
Q 017264 181 KPEEVVVTVFA-KGIPAKNVTVDFGEQILSVSIDVPGE-----------EAYHFQPRLFGKIIPAKCRYEVLSTKVEIRL 248 (374)
Q Consensus 181 t~~~V~i~i~~-k~~~~~~v~v~~~~~~l~v~~~~~~~-----------~~y~~~~~L~~~I~p~~s~~~v~~~kiei~L 248 (374)
+++.+.|.+.+ +|+.+++|.|++..+.|+|+...... ..|.=.+.|-..|+++..+.+.....+.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 55678888888 99999999999999999998753211 1244567899999999999999888999998
Q ss_pred eec
Q 017264 249 AKA 251 (374)
Q Consensus 249 ~K~ 251 (374)
-|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 774
No 270
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.01 E-value=3.5 Score=40.01 Aligned_cols=94 Identities=11% Similarity=0.086 Sum_probs=73.4
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHccCHHHHHHHHHHHHH---hCCCC----HHH
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISP--NS----AELFADRAQASIKLQNFTEAVADANRAIE---LEPSM----SKA 72 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p--~~----~~~~~~ra~~~~~l~~~~~Al~~~~~al~---l~p~~----~~a 72 (374)
...+..++..|+|.+|...+.......- .+ .+++......|+..+++..|...+.++.. -.+.. ...
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~ 220 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEY 220 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHH
Confidence 5678999999999999999988765421 11 46777788889999999999999988742 22333 345
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 73 YWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
+...|..+...++|.+|..+|..++..
T Consensus 221 ~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 221 YNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 566788999999999999999988754
No 271
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=90.55 E-value=3.4 Score=40.68 Aligned_cols=92 Identities=10% Similarity=0.091 Sum_probs=72.2
Q ss_pred ccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcCHHHHHHH
Q 017264 15 DDYFELAYDLYSQAIEIS-PNSAELFADRAQASIKLQNFTEAVADANRAIELEP-SMSKAYWRKATACMKLEEYETAKVA 92 (374)
Q Consensus 15 ~~~y~~Al~~y~~aL~~~-p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p-~~~~a~~~lg~~~~~lg~~~eA~~~ 92 (374)
.++.+.|.++|.+..... .-+...|..+..+|.+.|++++|+..++.....+- -+...|-.+-.+|.+.|+.++|...
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHH
Confidence 345788999999877652 23477889999999999999999999999887642 2456677788889999999999999
Q ss_pred HHHHHhc--CCCChhH
Q 017264 93 LEKGASL--APGDSRF 106 (374)
Q Consensus 93 ~~~a~~l--~p~~~~~ 106 (374)
|....+. .|+...+
T Consensus 163 ~~~M~~~G~~Pd~~ty 178 (501)
T 4g26_A 163 DAHMVESEVVPEEPEL 178 (501)
T ss_dssp HHHHHHTTCCCCHHHH
T ss_pred HHHHHhcCCCCCHHHH
Confidence 9987754 4554443
No 272
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.03 E-value=2.5 Score=43.35 Aligned_cols=83 Identities=19% Similarity=0.086 Sum_probs=52.5
Q ss_pred HHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH--------HhCCCCHHHHHHH----
Q 017264 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI--------ELEPSMSKAYWRK---- 76 (374)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al--------~l~p~~~~a~~~l---- 76 (374)
...++..|+++.|++.+. .-.+...+..+|..+.+.++++.|+..|.++- .....+.+.+.++
T Consensus 659 f~~~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a 733 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDA 733 (814)
T ss_dssp HHHHHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHH
Confidence 344555666666666642 34567889999999999999999999887641 1112333333333
Q ss_pred ---------HHHHHHhcCHHHHHHHHHHH
Q 017264 77 ---------ATACMKLEEYETAKVALEKG 96 (374)
Q Consensus 77 ---------g~~~~~lg~~~eA~~~~~~a 96 (374)
..+++.+|++++|++.|..+
T Consensus 734 ~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 734 ETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 23455577777777777653
No 273
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.01 E-value=1.5 Score=48.03 Aligned_cols=92 Identities=10% Similarity=-0.031 Sum_probs=73.1
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHh-----------------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEI-----------------------SPNSAELFADRAQASIKLQNFTEAVADANRA 62 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~-----------------------~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~a 62 (374)
+-+|..++..|++++|..+|.+|-.- ....+.+|......+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 67899999999999999999876321 0112456777788888899999999999999
Q ss_pred HHhCCC-CH----HHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017264 63 IELEPS-MS----KAYWRKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 63 l~l~p~-~~----~a~~~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
++..+. .. ..|.++..++..+|+|++|..++...-
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p 965 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS 965 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC
Confidence 987653 32 267889999999999999988886543
No 274
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=88.44 E-value=5 Score=33.77 Aligned_cols=86 Identities=16% Similarity=0.064 Sum_probs=63.6
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKL 83 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~l 83 (374)
.+...-...++=.+|+.++-+-.- +-|..++....++..++-.|.|.+|+-.+ ..-+...+.+..+.||..+
T Consensus 4 ~~~~kI~Ks~kY~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~kl 75 (242)
T 3kae_A 4 KLIGKICKSIRYRDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKKK 75 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHH---HC----CTHHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcccccHHHHHHHH---HccCChHHHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHHH
Confidence 344445566778889888754332 23555577777888999999999887633 4456778899999999999
Q ss_pred cCHHHHHHHHHHHH
Q 017264 84 EEYETAKVALEKGA 97 (374)
Q Consensus 84 g~~~eA~~~~~~a~ 97 (374)
++|..|+.+++..+
T Consensus 76 KdYkkA~~~le~il 89 (242)
T 3kae_A 76 KDYKKAIKSLESIL 89 (242)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999988
No 275
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.02 E-value=3.4 Score=34.84 Aligned_cols=87 Identities=9% Similarity=-0.013 Sum_probs=60.2
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCCHHHHH---
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELE--------PSMSKAYW--- 74 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~--------p~~~~a~~--- 74 (374)
..+-..+.+.|+++.|++..... ++...|..+|...+..|++.-|...|.++=..+ -++.+.+-
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla 83 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQ 83 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHH
Confidence 45667788999999999987654 567889999999999999888888776432111 12222222
Q ss_pred ----------HHHHHHHHhcCHHHHHHHHHHHH
Q 017264 75 ----------RKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 75 ----------~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
....+++.+|++++++..|.+.-
T Consensus 84 ~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 84 NIAQTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 23556677888888888877643
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.11 E-value=9.5 Score=38.91 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHH--------hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIE--------ISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWR 75 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~--------~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~ 75 (374)
.+...|..+.+.++++.|+..|.++=. ....+...+..++......|++..|...|.+ ++ + +-.
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~---~g--~---~~~ 754 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWI---AG--D---IQG 754 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHH---HT--C---HHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHH---cC--C---HHH
Confidence 457899999999999999999988511 1223334444455555555555555443322 11 1 122
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 017264 76 KATACMKLEEYETAKVALEKGASLAPGD 103 (374)
Q Consensus 76 lg~~~~~lg~~~eA~~~~~~a~~l~p~~ 103 (374)
.-.+|..++++++|+...++ +.|..
T Consensus 755 a~~~~~~~~~~~~A~~lA~~---~~~~~ 779 (814)
T 3mkq_A 755 AKDLLIKSQRFSEAAFLGST---YGLGD 779 (814)
T ss_dssp HHHHHHHTTCHHHHHHHHHH---TTCCH
T ss_pred HHHHHHHcCChHHHHHHHHH---hCCCh
Confidence 34568899999999886664 55554
No 277
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=84.22 E-value=16 Score=39.30 Aligned_cols=95 Identities=15% Similarity=0.042 Sum_probs=74.1
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEI----SPNSAELFADRAQASIKLQNFTEAVADANRAIELE--PSMSKAYWRKAT 78 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~----~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~--p~~~~a~~~lg~ 78 (374)
+...-+.+.+.|+.++|..+|.+.-+. ..-+...|..+-..|.+.|++++|+..|+.....+ | +.-.|-.+-.
T Consensus 130 ynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~ 208 (1134)
T 3spa_A 130 LLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHH
Confidence 455667899999999999999764422 23447889999999999999999999999998765 4 4445666666
Q ss_pred HHHHhcC-HHHHHHHHHHHHhcC
Q 017264 79 ACMKLEE-YETAKVALEKGASLA 100 (374)
Q Consensus 79 ~~~~lg~-~~eA~~~~~~a~~l~ 100 (374)
++.+.|+ .++|...|+......
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcHHHHHHHHHHHHHcC
Confidence 8888888 478888998876543
No 278
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=83.72 E-value=4.3 Score=29.58 Aligned_cols=29 Identities=28% Similarity=0.206 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
..+..+|..+-+.|+|++|+.+|.++|+.
T Consensus 20 i~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 20 RKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34556666666666666666666666553
No 279
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=83.58 E-value=9.1 Score=32.17 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH--HH------H
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKA--YW------R 75 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a--~~------~ 75 (374)
.+...|..++..|+++-|...|.++ .+ +..+...|.-.|+.+.-....+.|...+..+... ++ .
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~-----~D---~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~ 107 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQ-----HS---FDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKE 107 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHT-----TC---HHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHh-----CC---HHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHH
Confidence 4788999999999999999999884 33 2333344555566555444444444433322211 11 2
Q ss_pred HHHHHHHhcCHHHHHHHHHH
Q 017264 76 KATACMKLEEYETAKVALEK 95 (374)
Q Consensus 76 lg~~~~~lg~~~eA~~~~~~ 95 (374)
+..+|...|++.+|....+.
T Consensus 108 ~i~lL~~~~r~~eA~~~A~t 127 (177)
T 3mkq_B 108 RSSIFAEGGSLPLAYAVAKA 127 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHCCChHHHHHHHHH
Confidence 35668889999999876654
No 280
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=83.39 E-value=4.6 Score=29.37 Aligned_cols=28 Identities=29% Similarity=0.223 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
.+..+|..+=+.|+|++|+.+|.++|+.
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4555666666666666666666665553
No 281
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=83.25 E-value=7.7 Score=31.46 Aligned_cols=53 Identities=13% Similarity=0.041 Sum_probs=26.8
Q ss_pred HhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 017264 13 FIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (374)
Q Consensus 13 ~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l 65 (374)
..+|.-++--+.+...+.-.+-++.+++.+|.+|.++|+..+|-+.+.+|++.
T Consensus 102 v~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 34444444444444444444444555555555555555555555555555543
No 282
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=81.22 E-value=18 Score=34.36 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=54.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCChhHHHHHH
Q 017264 41 DRAQASIKLQNFTEAVADANRAIELEP------SMSKAYWRKATACMKLEEYETAKVALEKGASLA---PGDSRFTNLIK 111 (374)
Q Consensus 41 ~ra~~~~~l~~~~~Al~~~~~al~l~p------~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~---p~~~~~~~~~~ 111 (374)
++|..|+..|+|.+|+..+.+++.--. ...+.+..-..+|+.++++..+...|.++.... +.++.+...+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 688899999999999998888886422 235677778889999999999999999887553 23454444444
Q ss_pred HHH
Q 017264 112 ECE 114 (374)
Q Consensus 112 ~~~ 114 (374)
.|.
T Consensus 184 ~~~ 186 (394)
T 3txn_A 184 LQS 186 (394)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 283
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.58 E-value=4.5 Score=40.01 Aligned_cols=67 Identities=15% Similarity=0.077 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEPS-------MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~-------~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
+.++..+-..|+..+.|+.|.....++. .|. ....+|.+|.++...++|.+|..+|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 4455666778888899999999988885 332 256778889999999999999999999999888654
No 284
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=78.96 E-value=3.6 Score=42.13 Aligned_cols=51 Identities=27% Similarity=0.176 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCH
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEY 86 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~ 86 (374)
......+|...+..|+|.-|.+.++.++..+|++.++...++.+|.++|.-
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 455666777777778888888888888888888888877788888777754
No 285
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=78.37 E-value=40 Score=30.96 Aligned_cols=98 Identities=16% Similarity=0.131 Sum_probs=60.3
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCCC----CH----HH--HHHHHHHHH-----Hc--cC-----HHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISPN----SA----EL--FADRAQASI-----KL--QN-----FTEAVADANRA 62 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~----~~----~~--~~~ra~~~~-----~l--~~-----~~~Al~~~~~a 62 (374)
....|..++..|.|.+|+..|..+|..-|- +. ++ +...+.-|. ++ +. .++-.+.++.|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 468899999999999999999999988542 21 11 222222221 11 11 12222333333
Q ss_pred HHh-----CCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 63 IEL-----EPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 63 l~l-----~p~~~~a~~~lg~-~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
.-. .|.+.-.-++.|. ..++.++|..|....++.+++.|.
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 322 2333333344455 458899999999999999999886
No 286
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=77.43 E-value=26 Score=32.55 Aligned_cols=27 Identities=19% Similarity=0.097 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017264 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (374)
Q Consensus 68 ~~~~a~~~lg~~~~~lg~~~eA~~~~~ 94 (374)
.+++.|..+|..|+..++|.+|...|-
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 578889999999999999999988873
No 287
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=76.99 E-value=3.4 Score=30.38 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
..+..+|..+-..|+|++|+.+|..+|+.
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566666777777777777777766654
No 288
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.15 E-value=9.9 Score=26.95 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=23.5
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHH
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL 38 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~ 38 (374)
...|..+...|++++|+.+|..||...|.-..+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 456777777777777777777777777765443
No 289
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=72.75 E-value=4.9 Score=29.94 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=11.8
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIE 30 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~ 30 (374)
++.+|..+-..|+|++|+.+|..+|+
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34444444444444444444444433
No 290
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=72.62 E-value=5 Score=29.19 Aligned_cols=27 Identities=26% Similarity=0.392 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIE 30 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~ 30 (374)
.+..+|...-..|+|++|+.+|..+++
T Consensus 15 ~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 15 ELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344455555555555555555555544
No 291
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=72.54 E-value=23 Score=26.90 Aligned_cols=64 Identities=19% Similarity=0.127 Sum_probs=27.5
Q ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 48 ~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
..+.+++|...++-. ...+..-.+-+.+...+.+.|+|++|....+... .+++..|.+-|.-++
T Consensus 19 G~H~HqEA~tIAdwL-~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rl 82 (116)
T 2p58_C 19 GNHYHEEANCIAEWL-HLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRL 82 (116)
T ss_dssp TTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHH-HhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhc
Confidence 344455554443322 2222322333444445555555555554433211 344444544444443
No 292
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=72.20 E-value=41 Score=30.83 Aligned_cols=27 Identities=4% Similarity=-0.239 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 017264 68 SMSKAYWRKATACMKLEEYETAKVALE 94 (374)
Q Consensus 68 ~~~~a~~~lg~~~~~lg~~~eA~~~~~ 94 (374)
+++..|..+|..|+..+++.+|...|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 478889999999999999999998775
No 293
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=71.68 E-value=7.5 Score=28.64 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 3 TDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 3 ~~l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
+.++..|..+|+.++|-+|+.+|.++...
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 34455566666666666666666665544
No 294
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=71.64 E-value=4.7 Score=31.46 Aligned_cols=13 Identities=38% Similarity=0.432 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHH
Q 017264 18 FELAYDLYSQAIE 30 (374)
Q Consensus 18 y~~Al~~y~~aL~ 30 (374)
+..|+.++.+|+.
T Consensus 15 l~kAi~lv~~Ave 27 (117)
T 2cpt_A 15 LQKAIDLASKAAQ 27 (117)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4566666666654
No 295
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=69.87 E-value=30 Score=31.86 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=59.4
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhCC----CC----HHH--HHHHHHHHH-----Hc--cCH--HHHHHHHHHHHH-
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEISP----NS----AEL--FADRAQASI-----KL--QNF--TEAVADANRAIE- 64 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~~p----~~----~~~--~~~ra~~~~-----~l--~~~--~~Al~~~~~al~- 64 (374)
....|..++..|.|.+|+..|..+|..-+ ++ .++ +...+.-|. ++ +.. ++..+.++.|.-
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 46789999999999999999999998743 11 111 222222221 11 100 111122222221
Q ss_pred ----hCCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCCCh
Q 017264 65 ----LEPSMSKAYWRKAT-ACMKLEEYETAKVALEKGASLAPGDS 104 (374)
Q Consensus 65 ----l~p~~~~a~~~lg~-~~~~lg~~~eA~~~~~~a~~l~p~~~ 104 (374)
|.|.+.-.-+|.|. ..++.++|..|....++.+++.|...
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 12323333344455 45889999999999999999999644
No 296
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=66.72 E-value=18 Score=35.14 Aligned_cols=87 Identities=5% Similarity=-0.088 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHHhCCCC----------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC----------CCH
Q 017264 17 YFELAYDLYSQAIEISPNS----------------AELFADRAQASIKLQNFTEAVADANRAIELEP----------SMS 70 (374)
Q Consensus 17 ~y~~Al~~y~~aL~~~p~~----------------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p----------~~~ 70 (374)
..+.|...+.++....-++ ..+...+-.+|+++++..-|...+...-.... ...
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 3566777777877772221 11233455778899998888877744333221 135
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCC
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKGASL-APGD 103 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a~~l-~p~~ 103 (374)
..+|.+|..++..++|.+|..+|..|++. .|.+
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 67889999999999999999999999998 7765
No 297
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.36 E-value=8.3 Score=28.62 Aligned_cols=26 Identities=23% Similarity=0.232 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017264 71 KAYWRKATACMKLEEYETAKVALEKG 96 (374)
Q Consensus 71 ~a~~~lg~~~~~lg~~~eA~~~~~~a 96 (374)
..+-|++..+...|+|++|+.|.+++
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 34445666666666666665555544
No 298
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=66.35 E-value=13 Score=35.63 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEP---SMSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p---~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
..++..+|..|++.|++++|+..|.++..... .-.+.++..-.++...+++..+...+.++..+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 45788999999999999999999999887643 24678888889999999999999999998765
No 299
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=65.95 E-value=18 Score=25.65 Aligned_cols=39 Identities=8% Similarity=0.183 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 017264 74 WRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKE 112 (374)
Q Consensus 74 ~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~ 112 (374)
..+|..+...|++++|..+|-+|+...|.-..+...+.+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~ 59 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 357777888888888888888888887776665554443
No 300
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=65.34 E-value=34 Score=28.10 Aligned_cols=57 Identities=9% Similarity=-0.027 Sum_probs=36.8
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHhcCHHHHHHHHHHHHh
Q 017264 42 RAQASIKLQNFTEAVADANRAIELEPSM------SKAYWR-KATAC--MKLEEYETAKVALEKGAS 98 (374)
Q Consensus 42 ra~~~~~l~~~~~Al~~~~~al~l~p~~------~~a~~~-lg~~~--~~lg~~~eA~~~~~~a~~ 98 (374)
.+..++..|+|-+|-+.++.+....+.. ..++++ +|.++ ++.|+..-|...|.+++.
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3445555677777777777777665443 334455 54444 456888888888888765
No 301
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.21 E-value=33 Score=36.53 Aligned_cols=94 Identities=13% Similarity=0.023 Sum_probs=68.4
Q ss_pred HHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH-hCC-------------------
Q 017264 8 KAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIE-LEP------------------- 67 (374)
Q Consensus 8 ~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~-l~p------------------- 67 (374)
....+...+.|+-|.+ .+...|.++..-+-+|.+|+..|++++|..+|.+|-. +..
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4456667777765443 4566788888888899999999999999999987652 110
Q ss_pred -C--CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCChh
Q 017264 68 -S--MSKAYWRKATACMKLEEYETAKVALEKGASL-APGDSR 105 (374)
Q Consensus 68 -~--~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l-~p~~~~ 105 (374)
. ....|+....++...+-|+-++...+.|++. .++++.
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred ccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 1 1235666777888899999999999999964 455554
No 302
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.03 E-value=46 Score=36.18 Aligned_cols=90 Identities=11% Similarity=0.001 Sum_probs=66.2
Q ss_pred HHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----------------------
Q 017264 9 AKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIEL----------------------- 65 (374)
Q Consensus 9 g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l----------------------- 65 (374)
...++..+.|+.|.+ .+...+.++...+-+|.||+..|++++|..+|.+|..-
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~ 894 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHH 894 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTS
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccc
Confidence 344666666665544 34556778888888999999999999999999876311
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 66 EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 66 ~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
....+..|+....++...+.++.++.....|++..+.
T Consensus 895 ~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~ 931 (1139)
T 4fhn_B 895 QNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 931 (1139)
T ss_dssp CCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCS
T ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccC
Confidence 1123455666777888899999999999999887643
No 303
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=61.45 E-value=25 Score=26.63 Aligned_cols=16 Identities=25% Similarity=0.337 Sum_probs=7.6
Q ss_pred HHHHHHHccCHHHHHH
Q 017264 42 RAQASIKLQNFTEAVA 57 (374)
Q Consensus 42 ra~~~~~l~~~~~Al~ 57 (374)
|...+...|+|++|+.
T Consensus 45 R~sSLmNrG~Yq~Al~ 60 (115)
T 2uwj_G 45 RISSLANQGRYQEALA 60 (115)
T ss_dssp HHHHHHHTTCHHHHHG
T ss_pred HHHHHHcchhHHHHHH
Confidence 3444444555555444
No 304
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=58.35 E-value=14 Score=27.68 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=20.7
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCC
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPN 34 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~ 34 (374)
...|..++..|+++.|+.+|..||...|.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45677777777777777777777777665
No 305
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=58.14 E-value=31 Score=23.04 Aligned_cols=49 Identities=20% Similarity=0.172 Sum_probs=26.2
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017264 41 DRAQASIKLQNFTEAVADANRAIELEPSM-SKAYWRKATACMKLEEYETAK 90 (374)
Q Consensus 41 ~ra~~~~~l~~~~~Al~~~~~al~l~p~~-~~a~~~lg~~~~~lg~~~eA~ 90 (374)
.+|.+-...+.+++|...++- +...+.. -.+-+.+...+.+.|+|++|+
T Consensus 11 e~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 11 ELALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 344444456778888776644 4455543 445667778889999998886
No 306
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.44 E-value=16 Score=36.12 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=48.5
Q ss_pred HHHHHHHhccCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Q 017264 7 KKAKEAFIDDYFELAYDLYSQAIEISPNS-------AELFADRAQASIKLQNFTEAVADANRAIELEPS 68 (374)
Q Consensus 7 ~~g~~~~~~~~y~~Al~~y~~aL~~~p~~-------~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~ 68 (374)
..-..|...+.|+.|..+.+++. .|.+ ..++++.|.++.-.++|.+|.+++..|++..|.
T Consensus 236 llLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 236 LILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp HHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred HHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 34456778889999999999874 3432 567888899999999999999999999988764
No 307
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=56.27 E-value=45 Score=24.50 Aligned_cols=49 Identities=18% Similarity=0.360 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChh----HHHHHHHHHHHHH
Q 017264 69 MSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSR----FTNLIKECEERIA 118 (374)
Q Consensus 69 ~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~----~~~~~~~~~~~l~ 118 (374)
.+...+..|.-+|..++|.+|+..|+++..+.. |+. ....+..|.++|.
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te-n~~i~ki~~fyl~ec~kkla 104 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSD-NEEIKKIASFYLEECRKKLA 104 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc-CHHHHHHHHHHHHHHHHHhc
Confidence 345566677888899999999999998875543 332 2245677776664
No 308
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=56.08 E-value=27 Score=29.80 Aligned_cols=33 Identities=24% Similarity=0.168 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSA 36 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~ 36 (374)
-.+-.|..++.+++|.+|-+.+.+|++..|...
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 356789999999999999999999999988764
No 309
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=55.74 E-value=11 Score=27.16 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=20.3
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
....|..+...|+|+.|+.+|+.++..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 356777777888888888888777765
No 310
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=55.28 E-value=15 Score=34.39 Aligned_cols=23 Identities=13% Similarity=0.065 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHH
Q 017264 73 YWRKATACMKLEEYETAKVALEK 95 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~ 95 (374)
|..+|-.+|+.++|.+|+.++..
T Consensus 299 YtylgGy~yR~~~~reAl~~WA~ 321 (472)
T 3re2_A 299 YTYLGGYYYRKKKYYEAIASWVD 321 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhcchHHHHHHHHHH
Confidence 44444444444444444444443
No 311
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=59.34 E-value=2.7 Score=43.18 Aligned_cols=52 Identities=19% Similarity=0.145 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHH
Q 017264 37 ELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYET 88 (374)
Q Consensus 37 ~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~e 88 (374)
.....+|..++..|+|.-|.+.++.++..+|++.++...++.+|.++|.-.+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 3344555555556666666666666666666666666666666666665443
No 312
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=54.25 E-value=21 Score=34.19 Aligned_cols=44 Identities=16% Similarity=0.087 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 017264 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (374)
Q Consensus 20 ~Al~~y~~aL~~-----~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al 63 (374)
.++.+|.+|+.. ...+...|..+|.+|++.++|.+|+..+..|-
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 356677776665 33445667777777888888888777665544
No 313
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=53.71 E-value=77 Score=31.93 Aligned_cols=50 Identities=10% Similarity=-0.119 Sum_probs=25.6
Q ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017264 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 48 ~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
+.+++..|...+.+.-..........|=+|.++..+|+.++|...|+.+.
T Consensus 297 r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 297 GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44555555555543332222334455555555555666666666555554
No 314
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=53.46 E-value=44 Score=33.71 Aligned_cols=113 Identities=11% Similarity=-0.082 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHH--HHHHHHH--HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAEL--FADRAQA--SIKLQNFTEAVADANRAIELEPSMSKAYWRKATA 79 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~--~~~ra~~--~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~ 79 (374)
.+...+...+..++.+.|..+|...-....-+... ...+..+ +...+...++...+..+.....+....-++.+.
T Consensus 216 ~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~- 294 (618)
T 1qsa_A 216 QMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRM- 294 (618)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHH-
Confidence 45566677777889999999998876554333321 2222222 222343567777777766554444333344444
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Q 017264 80 CMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERI 117 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l 117 (374)
....|++..|...|.....-.........|++++...+
T Consensus 295 Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~ 332 (618)
T 1qsa_A 295 ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLER 332 (618)
T ss_dssp HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHc
Confidence 45679999999999876543334566788988875543
No 315
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.38 E-value=27 Score=37.21 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=40.8
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017264 42 RAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 42 ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
++..+...+.++-|. ..+...|.++-.-|.+|.+|...|++++|..+|+++-
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 445556677776433 3556677888888999999999999999999999875
No 316
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=52.37 E-value=60 Score=23.34 Aligned_cols=22 Identities=23% Similarity=0.096 Sum_probs=10.5
Q ss_pred HHHHHHHhcCHHHHHHHHHHHH
Q 017264 76 KATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 76 lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
.|+-+-..|+|.+|+.+|..++
T Consensus 25 ~Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 25 NAVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHH
Confidence 3344445555555555544443
No 317
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=52.13 E-value=1.2e+02 Score=26.31 Aligned_cols=64 Identities=17% Similarity=0.100 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHHH
Q 017264 53 TEAVADANRAIEL--EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDS-RFTNLIKECEER 116 (374)
Q Consensus 53 ~~Al~~~~~al~l--~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~-~~~~~~~~~~~~ 116 (374)
.++...|..+... +-..+..|..+|..+...|+|.+|...|+.+++..-.-. .+.......+.+
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHR 197 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 4566666666654 346788888999999999999999999999998764422 233344444444
No 318
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=51.05 E-value=57 Score=23.39 Aligned_cols=26 Identities=19% Similarity=0.031 Sum_probs=11.0
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHH
Q 017264 90 KVALEKGASLAPGDSRFTNLIKECEE 115 (374)
Q Consensus 90 ~~~~~~a~~l~p~~~~~~~~~~~~~~ 115 (374)
++.|..+++..|+...-.....++..
T Consensus 38 ie~l~~~lk~e~d~~~k~~ir~K~~e 63 (83)
T 2v6y_A 38 IEVLSQIIVLYPESVARTAYEQMINE 63 (83)
T ss_dssp HHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 33344444455554432333334433
No 319
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=49.26 E-value=27 Score=25.85 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAI 63 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al 63 (374)
+-.+..||..+.+.|+|++||....+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4566778888888899999988777666
No 320
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=48.41 E-value=67 Score=23.23 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=11.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
..|+-+-..|+|++|+.+|..++
T Consensus 21 ~~Ave~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 21 KRAVELDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 33444445555555555555444
No 321
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=46.12 E-value=67 Score=22.91 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 73 YWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 73 ~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
...+|.=|.-+|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45677777778888888877776654
No 322
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=45.75 E-value=33 Score=32.76 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 017264 20 LAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIE 64 (374)
Q Consensus 20 ~Al~~y~~aL~~-----~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~ 64 (374)
.++.+|.+||.. ...+...|.++|.++++.++|.+|++.+..|-.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 356677777664 334456677777777777888888777766553
No 323
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=45.58 E-value=47 Score=33.74 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
.+..+.+|...+..|+|.-|.+.+..++..+|+|..++..++.+..+|...
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 345778899999999999999999999999999999999999999998876
No 324
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=43.93 E-value=96 Score=25.37 Aligned_cols=60 Identities=5% Similarity=-0.040 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC------HHHHHH-HHH--HHHHccCHHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS------AELFAD-RAQ--ASIKLQNFTEAVADANRAI 63 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~------~~~~~~-ra~--~~~~l~~~~~Al~~~~~al 63 (374)
..+..|..+|..|+|=+|-+.+..+-...+.. ...+++ +|. .+.+.|+...|...+.+|+
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 45778999999999999999998887776544 223333 332 3344466666665554443
No 325
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=42.65 E-value=74 Score=29.86 Aligned_cols=47 Identities=19% Similarity=0.151 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q 017264 19 ELAYDLYSQAIEI-----SPNSAELFADRAQASIKLQNFTEAVADANRAIEL 65 (374)
Q Consensus 19 ~~Al~~y~~aL~~-----~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l 65 (374)
..++.+|.+||.. ...+...|..+|.+|++.+++.+|++.+..|-..
T Consensus 274 ~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 274 PPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 4489999999886 4455778899999999999999999988777654
No 326
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=42.31 E-value=36 Score=25.33 Aligned_cols=35 Identities=9% Similarity=0.164 Sum_probs=21.0
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHH
Q 017264 75 RKATACMKLEEYETAKVALEKGASLAPGDSRFTNL 109 (374)
Q Consensus 75 ~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~ 109 (374)
.+|..+...|+++.|+..|-+|+...|.-..+...
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i 59 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQV 59 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 45666666666666666666666666654443333
No 327
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=41.11 E-value=96 Score=22.66 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=6.0
Q ss_pred HHhcCHHHHHHHHHH
Q 017264 81 MKLEEYETAKVALEK 95 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~ 95 (374)
-..|+|.+|+.+|..
T Consensus 26 D~~g~y~eAl~~Y~~ 40 (93)
T 1wfd_A 26 DAESRYQQALVCYQE 40 (93)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHH
Confidence 334444444443333
No 328
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.89 E-value=70 Score=24.70 Aligned_cols=16 Identities=13% Similarity=0.312 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHhCC
Q 017264 52 FTEAVADANRAIELEP 67 (374)
Q Consensus 52 ~~~Al~~~~~al~l~p 67 (374)
|..|..+..+||.++-
T Consensus 19 h~~AF~~Is~AL~~DE 34 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDE 34 (116)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh
Confidence 5666666666666653
No 329
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=39.44 E-value=1e+02 Score=21.95 Aligned_cols=19 Identities=26% Similarity=0.233 Sum_probs=8.5
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 017264 79 ACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 79 ~~~~lg~~~eA~~~~~~a~ 97 (374)
-.-..|+|++|+.+|..++
T Consensus 22 ~~D~~g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGL 40 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 3344444444444444433
No 330
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=38.25 E-value=1.4e+02 Score=24.24 Aligned_cols=34 Identities=12% Similarity=0.019 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017264 67 PSMSKAYWRKATACMKLEEYETAKVALEKGASLA 100 (374)
Q Consensus 67 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~ 100 (374)
+-.+..++.+|.+|..+|+..+|.+.+.+|-+..
T Consensus 122 ~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 122 EVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 3458999999999999999999999998876543
No 331
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=37.80 E-value=89 Score=30.46 Aligned_cols=64 Identities=20% Similarity=0.206 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC-----------CHHHHHHH
Q 017264 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS-----------MSKAYWRK 76 (374)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------~~~~~Al~~~~~al~l~p~-----------~~~a~~~l 76 (374)
.++++.||.+|+.| .-|+.-+.+++.|+.+-|. -..++..+
T Consensus 109 aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~all 188 (517)
T 3qnk_A 109 GEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFILEDLKKATEMLPASYGSREKGRATKGAAYALK 188 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHH
Confidence 57888888888775 1134457788888876542 24578889
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhc
Q 017264 77 ATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 77 g~~~~~lg~~~eA~~~~~~a~~l 99 (374)
|.+|...++|++|..+++.++..
T Consensus 189 arv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 189 SRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
No 332
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=37.77 E-value=68 Score=27.16 Aligned_cols=35 Identities=14% Similarity=-0.049 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Q 017264 36 AELFADRAQASIKLQNFTEAVADANRAIELEPSMS 70 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~ 70 (374)
..+++.+|..+...++|.+|..++..|++..|...
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 56788899999999999999999999999988654
No 333
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=37.71 E-value=21 Score=28.72 Aligned_cols=23 Identities=22% Similarity=0.381 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHhhh
Q 017264 315 ALNKFFQEIYADADEDTRRAMKK 337 (374)
Q Consensus 315 ~~~~~f~~iY~~~d~d~kram~K 337 (374)
.|..+|...|..+|+++|+.|++
T Consensus 85 ~l~~~f~~~~~~~d~~~r~k~~r 107 (144)
T 1sz9_A 85 NLFNLYKRTYLLVDNTTRTKLIN 107 (144)
T ss_dssp THHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 46667777777777777777765
No 334
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=37.54 E-value=2e+02 Score=24.86 Aligned_cols=52 Identities=10% Similarity=-0.056 Sum_probs=30.2
Q ss_pred HhccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q 017264 13 FIDDYFELAYDLYSQAIEI--------SPNSAELFADRAQASIK-LQNFTEAVADANRAIE 64 (374)
Q Consensus 13 ~~~~~y~~Al~~y~~aL~~--------~p~~~~~~~~ra~~~~~-l~~~~~Al~~~~~al~ 64 (374)
+..|+-+.|...|..|+.+ +|-...+..+.+..|+. +++.++|...+.+|+.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4455556667777766654 22233445555555544 5677777777777754
No 335
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=37.34 E-value=1.3e+02 Score=22.73 Aligned_cols=83 Identities=12% Similarity=0.034 Sum_probs=53.1
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEE 85 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~ 85 (374)
...|...--....++|...-+- |...+..-.+-.-|...+...|+|++|+...+... .++.---+|.|-.++|-
T Consensus 11 AE~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl 84 (116)
T 2p58_C 11 AEIALIGTGNHYHEEANCIAEW-LHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGL 84 (116)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhccc
Confidence 3444444455567777766544 55555544455557778888999999988553332 44444456777788888
Q ss_pred HHHHHHHHH
Q 017264 86 YETAKVALE 94 (374)
Q Consensus 86 ~~eA~~~~~ 94 (374)
-..+...+.
T Consensus 85 ~s~le~rL~ 93 (116)
T 2p58_C 85 GSALESRLN 93 (116)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777763
No 336
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=37.10 E-value=93 Score=22.86 Aligned_cols=54 Identities=11% Similarity=-0.058 Sum_probs=24.9
Q ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHH--HhcCHHHHHHHHHHHHh
Q 017264 43 AQASIKLQNFTEAVADANRAIELEPSM----SKAYWRKATACM--KLEEYETAKVALEKGAS 98 (374)
Q Consensus 43 a~~~~~l~~~~~Al~~~~~al~l~p~~----~~a~~~lg~~~~--~lg~~~eA~~~~~~a~~ 98 (374)
|..++..|+|-+|-+.++.+....+.. ...+.+++.+++ ..|+. |...|.+++.
T Consensus 8 ~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 8 VLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 334444455555555555555554321 223333443332 34444 5555555543
No 337
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=36.89 E-value=1.4e+02 Score=22.66 Aligned_cols=74 Identities=18% Similarity=0.101 Sum_probs=48.3
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHH
Q 017264 39 FADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIA 118 (374)
Q Consensus 39 ~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~ 118 (374)
+..+|.+-...+.+++|...++-. ...+..-.+-+.+...+.+.|+|++|....+.. + .+++..|.+-|.-+++
T Consensus 9 LAE~AL~gTG~H~HqEA~tIAdwL-~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~----c-~pdlepw~ALce~rlG 82 (115)
T 2uwj_G 9 LAELALAGSGQHCHEEALCIAEWL-ERLGQDEAARLIRISSLANQGRYQEALAFAHGN----P-WPALEPWFALCEWHLG 82 (115)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTC----C-CGGGHHHHHHHHHHTT
T ss_pred HHHHHHHHccchHHHHHHHHHHHH-HhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCC----C-CchHHHHHHHHHHhcc
Confidence 334444555567888887766544 444454456667778889999999988655432 2 5667777777766543
No 338
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=36.68 E-value=1e+02 Score=29.70 Aligned_cols=64 Identities=27% Similarity=0.107 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC-------------------
Q 017264 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS------------------- 68 (374)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------~~~~~Al~~~~~al~l~p~------------------- 68 (374)
.++++.||.+|+.| .-|+.-+.+++.|+.+-|.
T Consensus 112 gEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~ 191 (478)
T 3hdx_A 112 AQVRALRAFAYFYMVRIWGDVPLVTYSYDNGTFPSMPRTDAQTVLSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQG 191 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCCCTTCCCCCCCBCHHHHHHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCcccccCCCCCCHHHHHHHHHHHHHHHHHhCcccccCCcccccccccccccc
Confidence 57888888888775 1134457788888876442
Q ss_pred ----CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 69 ----MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 69 ----~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
-..++..+|.+|...|+|++|..++++++..
T Consensus 192 ~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 192 KLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 1347778999999999999999999998753
No 339
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=36.15 E-value=36 Score=24.93 Aligned_cols=38 Identities=8% Similarity=-0.039 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 017264 18 FELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAI 63 (374)
Q Consensus 18 y~~Al~~y~~aL~~~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al 63 (374)
++.|.+.++-| ..|+.-|.-|++.|++..|+..+.-+.
T Consensus 29 ~~~a~~~l~mA--------~~Y~~Da~~fl~kGD~v~Ala~isYa~ 66 (87)
T 2pmr_A 29 SDDEEAVVERA--------LNYRDDSVYYLEKGDHITSFGCITYAH 66 (87)
T ss_dssp CHHHHHHHHHH--------HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH--------HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45666666663 456777777888888888877766554
No 340
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=36.04 E-value=36 Score=24.84 Aligned_cols=24 Identities=8% Similarity=0.080 Sum_probs=11.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHH
Q 017264 39 FADRAQASIKLQNFTEAVADANRA 62 (374)
Q Consensus 39 ~~~ra~~~~~l~~~~~Al~~~~~a 62 (374)
|+.-|.-|++.|++..|+..+.-+
T Consensus 38 Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 38 YISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 444444555555555555544433
No 341
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=35.64 E-value=1.7e+02 Score=23.54 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 53 TEAVADANRAIEL--EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 53 ~~Al~~~~~al~l--~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
.++...|..+... +-..+..|...|..+...|++.+|...|+.+++....
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 3466777666644 4567888889999999999999999999999987643
No 342
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=33.24 E-value=54 Score=25.29 Aligned_cols=10 Identities=30% Similarity=0.335 Sum_probs=4.3
Q ss_pred HHHHHHHHHH
Q 017264 54 EAVADANRAI 63 (374)
Q Consensus 54 ~Al~~~~~al 63 (374)
.|+..+.+|+
T Consensus 17 kAi~lv~~Av 26 (117)
T 2cpt_A 17 KAIDLASKAA 26 (117)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 343
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=32.66 E-value=1.3e+02 Score=28.84 Aligned_cols=63 Identities=11% Similarity=-0.022 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHccC--HHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 36 AELFADRAQASIKLQN--FTEAVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 36 ~~~~~~ra~~~~~l~~--~~~Al~~~~~al~l~-----p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
+.++.++|.+-.-... ...++..|.+|+... ..+.-.|..+|-.+++.++|.+|+.++..+-.
T Consensus 262 PmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~ 331 (489)
T 4gq4_A 262 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 331 (489)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh
Confidence 5555555555432211 123556666666542 34455677789999999999999999988754
No 344
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=32.38 E-value=1.3e+02 Score=28.87 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhC-----CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 55 AVADANRAIELE-----PSMSKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 55 Al~~~~~al~l~-----p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
++..|.+|+... ..+.-.|..+|-.||+.++|.+|+.++..+-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 566666666542 33455678889999999999999999987644
No 345
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=32.12 E-value=88 Score=30.21 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHHHHHhCCC--------CHHHHHHHHHH
Q 017264 36 AELFADRAQASIKL----------------------------QNFTEAVADANRAIELEPS--------MSKAYWRKATA 79 (374)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------~~~~~Al~~~~~al~l~p~--------~~~a~~~lg~~ 79 (374)
.++++.||.+|+.| .-|+.-+.+++.|+.+-|. -..++..+|.+
T Consensus 110 aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarv 189 (481)
T 3jq1_A 110 GECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKI 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Confidence 57888888888775 1144567788888876552 24578889999
Q ss_pred HHHhcCHHHHHHHHHHHHh
Q 017264 80 CMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 80 ~~~lg~~~eA~~~~~~a~~ 98 (374)
|...++|++|..+++.++.
T Consensus 190 yL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 190 YVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHTTCHHHHHHHHGGGGS
T ss_pred HHHHhHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 346
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=31.63 E-value=2.9e+02 Score=29.92 Aligned_cols=67 Identities=6% Similarity=-0.141 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--CCCCh
Q 017264 37 ELFADRAQASIKLQNFTEAVADANRAIE-----LEPSMSKAYWRKATACMKLEEYETAKVALEKGASL--APGDS 104 (374)
Q Consensus 37 ~~~~~ra~~~~~l~~~~~Al~~~~~al~-----l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l--~p~~~ 104 (374)
..|..+-.+|.+.|+.++|...|..... ..| +...|-.+-..|+..|+.++|...|....+. .|+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHH
Confidence 3577788899999999999999976543 334 4567788888999999999999999987653 46544
No 347
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=29.84 E-value=1.4e+02 Score=29.13 Aligned_cols=79 Identities=18% Similarity=0.074 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhCCC---C-------HHHHHHHHHHHHHc----------------------------cCHHHHHHHHHH
Q 017264 20 LAYDLYSQAIEISPN---S-------AELFADRAQASIKL----------------------------QNFTEAVADANR 61 (374)
Q Consensus 20 ~Al~~y~~aL~~~p~---~-------~~~~~~ra~~~~~l----------------------------~~~~~Al~~~~~ 61 (374)
.+|...+.+|+.-+. . .++++.||.+|+.| .-++.-+.+++.
T Consensus 97 ~~I~~~N~~l~~i~~~~~~~~~~~~~aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~ 176 (528)
T 3i4g_A 97 KRIGYCNRFLVGIQNSSESEKKTRMIAEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTA 176 (528)
T ss_dssp HHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHH
Confidence 455555555554221 1 57888888888775 012335677888
Q ss_pred HHHhCCC-------------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 62 AIELEPS-------------MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 62 al~l~p~-------------~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
|+.+-|. -..|+..+|.+|...++|++|..+++.++.
T Consensus 177 A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 177 AAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 8876551 135788899999999999999999999875
No 348
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=29.07 E-value=2.3e+02 Score=23.04 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHccCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEISPNS--AELFADRAQASIKLQNFTEAV-ADANRAIELEPSMSKAYWRKATAC 80 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~--~~~~~~ra~~~~~l~~~~~Al-~~~~~al~l~p~~~~a~~~lg~~~ 80 (374)
..+..|+.+|-..+|...|..+.. .+|.. ....+.+|..|.+..++.+-. ......+.+. .+. .+.+-=++
T Consensus 10 ~a~i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlk-Sde--~yL~YWIy 83 (161)
T 2ynq_A 10 EAYIQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLK-TDE--QYMLYWIY 83 (161)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTT-SCH--HHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCcc-CCH--HHHHHHHH
Confidence 457789999999999999998865 33332 567788999999987766333 2221122121 122 22233356
Q ss_pred HHhcCHHHHHHHHHH
Q 017264 81 MKLEEYETAKVALEK 95 (374)
Q Consensus 81 ~~lg~~~eA~~~~~~ 95 (374)
...|++++|+.....
T Consensus 84 iGRg~~~eAlDiA~~ 98 (161)
T 2ynq_A 84 IGRSQSEEALELART 98 (161)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HcCCchHHHHHHHHh
Confidence 667888888876654
No 349
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.51 E-value=3.8e+02 Score=25.31 Aligned_cols=61 Identities=13% Similarity=-0.035 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCC-----CHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017264 37 ELFADRAQASIKLQNFTEAVADANRAIEL-EPS-----MSKAYWRKATACMKLEEYETAKVALEKGA 97 (374)
Q Consensus 37 ~~~~~ra~~~~~l~~~~~Al~~~~~al~l-~p~-----~~~a~~~lg~~~~~lg~~~eA~~~~~~a~ 97 (374)
.+...+|..|...|++.+|...+.....- ... -.+.++.-..+|+..++|..|...+.++.
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 44566788888999999999888766532 111 24577778889999999999999998864
No 350
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.34 E-value=2.5e+02 Score=26.13 Aligned_cols=88 Identities=6% Similarity=-0.087 Sum_probs=57.5
Q ss_pred HHHhccCHHHHHHHHHHHHHhC-------C--------CC--HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------C
Q 017264 11 EAFIDDYFELAYDLYSQAIEIS-------P--------NS--AELFADRAQASIKLQNFTEAVADANRAIEL-------E 66 (374)
Q Consensus 11 ~~~~~~~y~~Al~~y~~aL~~~-------p--------~~--~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-------~ 66 (374)
......+..+|++++.+....- . .. ..+....+..|...++..+|...++++-.. +
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 3446678999999988764321 0 11 334455677888899999999988877643 1
Q ss_pred CC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 67 PS-MSKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 67 p~-~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
|. +...|...+..|...++|..+...+-.++.
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 11 234444566667778888887776666554
No 351
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=28.13 E-value=2.8e+02 Score=24.88 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=60.8
Q ss_pred HHHHHHHHhccCHHHHHHHH-------HHHHHhCC----CCHHHHHHHHHHH---HHcc---------------CHHHHH
Q 017264 6 EKKAKEAFIDDYFELAYDLY-------SQAIEISP----NSAELFADRAQAS---IKLQ---------------NFTEAV 56 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y-------~~aL~~~p----~~~~~~~~ra~~~---~~l~---------------~~~~Al 56 (374)
+.-....+..|+.++.+.++ ++.|+... -+..+|.-.|.++ ..+- -|+.|+
T Consensus 26 y~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede~~V~eFFDaAL 105 (346)
T 3qtm_A 26 YEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEESYIDAAI 105 (346)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHHHHHHHH
T ss_pred HHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCchhhhHHHHHHHHH
Confidence 44556677788877766554 45555432 1234444445554 2221 245566
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHhh
Q 017264 57 ADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPGDSRFTNLIKECEERIAEE 120 (374)
Q Consensus 57 ~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~~~~~~~~~~~~~~~l~~~ 120 (374)
+-++..+...|++....+.++.++++.-+.--+...=..-....|....+...+.++..-++..
T Consensus 106 ERielGLe~~p~s~~L~la~SKILlqrI~~~~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~~L 169 (346)
T 3qtm_A 106 ERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLRPL 169 (346)
T ss_dssp HHHHHGGGSSSCCHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHHHH
Confidence 6666666667888887777777777654433332222222222333334555555555544433
No 352
>3clj_A Protein NRD1; CTD-interacting domain, nucleus, phosphoprotein, RNA polymer binding protein, RNA binding protein; 2.10A {Saccharomyces cerevisiae}
Probab=27.00 E-value=34 Score=27.98 Aligned_cols=23 Identities=9% Similarity=0.421 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHhhh
Q 017264 315 ALNKFFQEIYADADEDTRRAMKK 337 (374)
Q Consensus 315 ~~~~~f~~iY~~~d~d~kram~K 337 (374)
-+-.||..+|..+++|+|+.|.|
T Consensus 100 ~i~~l~~~~~~~~~~~~k~Ki~k 122 (157)
T 3clj_A 100 VIQELLSDAIAKSNQDHKEKIRM 122 (157)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 46778888899999999988876
No 353
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=26.68 E-value=1.5e+02 Score=28.25 Aligned_cols=31 Identities=10% Similarity=-0.189 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 69 MSKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 69 ~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
-..++..+|.+|..+++|++|..+++.++..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3557888899999999999999999988753
No 354
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=26.66 E-value=3.9e+02 Score=29.61 Aligned_cols=41 Identities=10% Similarity=-0.013 Sum_probs=25.0
Q ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCHHHH
Q 017264 48 KLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 89 (374)
Q Consensus 48 ~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA 89 (374)
.+++|..|++.+.++++-.+ ..+.+-.++.++..+|.-.-+
T Consensus 1296 ~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l~w~h~~ 1336 (1354)
T 3lxu_X 1296 AHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGALGHEHIR 1336 (1354)
T ss_dssp HHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHcCCHHHH
Confidence 45677777777777776664 334555566666666654433
No 355
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=25.86 E-value=79 Score=25.36 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQAIEI 31 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~aL~~ 31 (374)
|..++..|..+...|+++.|.-+|-+++.+
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 456777788888888888887777775444
No 356
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=25.80 E-value=2.9e+02 Score=26.49 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHc------------------------cCHHHHHHHHHHHHHhC
Q 017264 20 LAYDLYSQAIEISPNS---------AELFADRAQASIKL------------------------QNFTEAVADANRAIELE 66 (374)
Q Consensus 20 ~Al~~y~~aL~~~p~~---------~~~~~~ra~~~~~l------------------------~~~~~Al~~~~~al~l~ 66 (374)
.+|...+.+|+.-+.. .++++.||.+|+.| .=|+.-+.+++.|+.+-
T Consensus 104 ~~I~~aN~~i~~i~~~~~~~~~~~~gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~~A~~~L 183 (527)
T 3ckc_A 104 YDITQYNFFLDQTEGMTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADM 183 (527)
T ss_dssp HHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 4566666666654321 57888899998776 11345677888887654
Q ss_pred CC----------CHHHHHHHHHHHHHh------cCHHHHHHHHHHHHh
Q 017264 67 PS----------MSKAYWRKATACMKL------EEYETAKVALEKGAS 98 (374)
Q Consensus 67 p~----------~~~a~~~lg~~~~~l------g~~~eA~~~~~~a~~ 98 (374)
|. -..|+..+|.+|+.. ++|++|..+++.++.
T Consensus 184 p~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 184 YEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp CCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 42 245677788888765 899999999999885
No 357
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=25.19 E-value=1.4e+02 Score=28.75 Aligned_cols=59 Identities=12% Similarity=-0.030 Sum_probs=39.0
Q ss_pred HHHHhccCHHHHHHHHHHHHHhCC--C--------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCC
Q 017264 10 KEAFIDDYFELAYDLYSQAIEISP--N--------SAELFADRAQASIKLQNFTEAVADANRAIEL-EPS 68 (374)
Q Consensus 10 ~~~~~~~~y~~Al~~y~~aL~~~p--~--------~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l-~p~ 68 (374)
..||+.++..-+-..+...-.... . -..+++++|..+.-.++|.+|..++..|++. .|.
T Consensus 184 kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 184 NIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 566777777666666643222211 1 1467777888888888888888888888877 554
No 358
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.85 E-value=1.4e+02 Score=28.51 Aligned_cols=14 Identities=29% Similarity=0.204 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHc
Q 017264 36 AELFADRAQASIKL 49 (374)
Q Consensus 36 ~~~~~~ra~~~~~l 49 (374)
.++++.||.+|+.|
T Consensus 111 gEa~flRA~~yf~L 124 (454)
T 3myv_A 111 GETMAVIALCQFDL 124 (454)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46777788887765
No 359
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=24.68 E-value=1e+02 Score=26.95 Aligned_cols=14 Identities=29% Similarity=0.121 Sum_probs=5.8
Q ss_pred ccCHHHHHHHHHHH
Q 017264 49 LQNFTEAVADANRA 62 (374)
Q Consensus 49 l~~~~~Al~~~~~a 62 (374)
+++.++|...+.+|
T Consensus 186 l~~~~~A~~lAk~a 199 (234)
T 2br9_A 186 LNSPDRACRLAKAA 199 (234)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 34444444444333
No 360
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.69 E-value=1.9e+02 Score=21.15 Aligned_cols=57 Identities=7% Similarity=-0.064 Sum_probs=35.8
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHhCCCCH----HHHHHHHHH--HHHccCHHHHHHHHHHHHH
Q 017264 6 EKKAKEAFIDDYFELAYDLYSQAIEISPNSA----ELFADRAQA--SIKLQNFTEAVADANRAIE 64 (374)
Q Consensus 6 ~~~g~~~~~~~~y~~Al~~y~~aL~~~p~~~----~~~~~ra~~--~~~l~~~~~Al~~~~~al~ 64 (374)
+..|..+|..|+|=+|-+.+..+-...+... ..++.+|.+ +.+.|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 5678899999999999999988877775421 122333322 2334554 5555555554
No 361
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=23.57 E-value=1e+02 Score=23.85 Aligned_cols=50 Identities=14% Similarity=0.375 Sum_probs=36.7
Q ss_pred ccCCeEEEEEEeCCCCCCceEEEEeee-EEEEEEEcCCCC-eeeecc-ccccc
Q 017264 180 QKPEEVVVTVFAKGIPAKNVTVDFGEQ-ILSVSIDVPGEE-AYHFQP-RLFGK 229 (374)
Q Consensus 180 Qt~~~V~i~i~~k~~~~~~v~v~~~~~-~l~v~~~~~~~~-~y~~~~-~L~~~ 229 (374)
|.++.|.++|.++|.....+.++|.+. .++|.+...+|+ -|.+.- ..|-.
T Consensus 15 ~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ 67 (120)
T 3isy_A 15 QEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ 67 (120)
T ss_dssp ECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC
T ss_pred cCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh
Confidence 567789999999999899999999874 568888764443 354443 56655
No 362
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.48 E-value=1.7e+02 Score=27.88 Aligned_cols=29 Identities=17% Similarity=0.046 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGAS 98 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~ 98 (374)
..++..+|.+|..+|+|++|..+++.++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 56788899999999999999999998875
No 363
>3may_A RV0203, possible exported protein; helical protein, heme-binding protein; 2.50A {Mycobacterium tuberculosis}
Probab=23.40 E-value=52 Score=24.71 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCCHHHHHHhhhhhhhcCCe
Q 017264 314 AALNKFFQEIYADADEDTRRAMKKSFVESNGT 345 (374)
Q Consensus 314 ~~~~~~f~~iY~~~d~d~kram~Ks~~eS~gt 345 (374)
..+|.||-.|+.....+..|+=+|+|.+.|=.
T Consensus 30 P~vN~~~T~~~~q~p~~q~~a~v~~Yf~aNPq 61 (101)
T 3may_A 30 PETNQVMTAVLQQQVGPGSVASLKAHFEANPK 61 (101)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHccCChHHHHHHHHHHHHhCcH
Confidence 35899999999998888999999999988744
No 364
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=23.26 E-value=1.8e+02 Score=28.04 Aligned_cols=30 Identities=20% Similarity=0.168 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
..++..+|.+|..+++|++|..++++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 457777888888888888888888888764
No 365
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.08 E-value=1.5e+02 Score=28.29 Aligned_cols=14 Identities=29% Similarity=0.278 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHc
Q 017264 36 AELFADRAQASIKL 49 (374)
Q Consensus 36 ~~~~~~ra~~~~~l 49 (374)
.++++.||.+|+.|
T Consensus 117 gEA~flRA~~yf~L 130 (461)
T 3kez_A 117 GQALAIRGMALFDL 130 (461)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46777788887765
No 366
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=22.90 E-value=3.5e+02 Score=22.90 Aligned_cols=80 Identities=10% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 017264 4 DLEKKAKEAFIDDYFELAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACM 81 (374)
Q Consensus 4 ~l~~~g~~~~~~~~y~~Al~~y~~aL~~--~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~a~~~lg~~~~ 81 (374)
.+.-.-..++..++...+...|...... .-..+.+|...|..+...|++.+|...|..+++.......-+.+.-..+.
T Consensus 81 klWl~Ya~~~~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~rL~~~~~~F~ 160 (202)
T 3esl_A 81 KIWIWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNRLLRSLSNYE 160 (202)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHH
Q ss_pred Hh
Q 017264 82 KL 83 (374)
Q Consensus 82 ~l 83 (374)
..
T Consensus 161 ~R 162 (202)
T 3esl_A 161 DR 162 (202)
T ss_dssp HH
T ss_pred HH
No 367
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=22.85 E-value=18 Score=32.26 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCHHHHHHHHHHHHH
Q 017264 5 LEKKAKEAFIDDYFELAYDLYSQAIE 30 (374)
Q Consensus 5 l~~~g~~~~~~~~y~~Al~~y~~aL~ 30 (374)
+..+|..+=..|+|++|+.+|..+|+
T Consensus 26 lv~~AVe~D~~g~y~eAl~lY~eaIe 51 (257)
T 2ymb_A 26 VLKRAVELDSESRYPQALVCYQEGID 51 (257)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34444444455555555555554444
No 368
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=22.78 E-value=1.2e+02 Score=29.23 Aligned_cols=63 Identities=17% Similarity=0.015 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHc----------------------------cCHH-HHHHHHHHHHHh-CC--------CCHHHHHHHH
Q 017264 36 AELFADRAQASIKL----------------------------QNFT-EAVADANRAIEL-EP--------SMSKAYWRKA 77 (374)
Q Consensus 36 ~~~~~~ra~~~~~l----------------------------~~~~-~Al~~~~~al~l-~p--------~~~~a~~~lg 77 (374)
.++++.||.+|+.| .-|+ .-+.+++.|+.+ -| +-..++..+|
T Consensus 116 aEa~flRA~~Yf~L~~~~G~VPl~~~~~~~~~~~~~~r~~~~evy~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~alla 195 (482)
T 3otn_A 116 AEVKFMRALYYFYLVRIFGDVPKITTVQSELGELQVSRAPVKEIYDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLA 195 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCGGGCSCSSCCCBCHHHHHHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcceeCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHH
Confidence 57888888888775 1144 466788888876 33 2255788899
Q ss_pred HHHHHhc---------CHHHHHHHHHHHHh
Q 017264 78 TACMKLE---------EYETAKVALEKGAS 98 (374)
Q Consensus 78 ~~~~~lg---------~~~eA~~~~~~a~~ 98 (374)
.+|...+ +|++|..+++.++.
T Consensus 196 rvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 196 DVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 9998888 89999999998875
No 369
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.63 E-value=1.9e+02 Score=27.99 Aligned_cols=14 Identities=21% Similarity=0.199 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHc
Q 017264 36 AELFADRAQASIKL 49 (374)
Q Consensus 36 ~~~~~~ra~~~~~l 49 (374)
.++++.||.+|+.|
T Consensus 119 gEA~flRA~~Yf~L 132 (495)
T 3lew_A 119 GQALALRGFLYLHL 132 (495)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56777788887765
No 370
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=22.39 E-value=3.2e+02 Score=22.26 Aligned_cols=50 Identities=14% Similarity=0.126 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017264 53 TEAVADANRAIEL--EPSMSKAYWRKATACMKLEEYETAKVALEKGASLAPG 102 (374)
Q Consensus 53 ~~Al~~~~~al~l--~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l~p~ 102 (374)
.++...|..+... +-..+..|...|..+...|++.+|...|..+++....
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 4466677776654 4567888899999999999999999999999987643
No 371
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=22.36 E-value=1e+02 Score=23.24 Aligned_cols=27 Identities=26% Similarity=0.080 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQA 28 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~a 28 (374)
|+.+...|..+.+.|+|++|-+++.+|
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA 46 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEA 46 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455666777788888888888888765
No 372
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.21 E-value=1.8e+02 Score=27.75 Aligned_cols=30 Identities=17% Similarity=0.007 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017264 70 SKAYWRKATACMKLEEYETAKVALEKGASL 99 (374)
Q Consensus 70 ~~a~~~lg~~~~~lg~~~eA~~~~~~a~~l 99 (374)
..++..+|.+|...++|++|..+++.++..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 457788899999999999999999988764
No 373
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=22.02 E-value=3.1e+02 Score=22.01 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=39.4
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q 017264 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (374)
Q Consensus 21 Al~~y~~aL~~--~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~ 71 (374)
+.+.|...... .-..+.+|...|..+...|++.+|...|..+++......+
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~ 136 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPRE 136 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHH
Confidence 55556554443 4455888999999999999999999999999998765443
No 374
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=21.96 E-value=3.2e+02 Score=22.20 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=39.3
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Q 017264 21 AYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSK 71 (374)
Q Consensus 21 Al~~y~~aL~~--~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~~~ 71 (374)
+.+.|...... .-..+.+|...|..+...|++.+|...|..++........
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~ 131 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLE 131 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH
Confidence 55555554443 4455888999999999999999999999999998755443
No 375
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=21.84 E-value=1.1e+02 Score=23.05 Aligned_cols=27 Identities=22% Similarity=0.150 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQA 28 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~a 28 (374)
|+.+...|..+.+.|+|++|-+++.+|
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA 44 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQS 44 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455667777888888888888888765
No 376
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=21.22 E-value=3.9e+02 Score=22.92 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q 017264 20 LAYDLYSQAIEI--SPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSM 69 (374)
Q Consensus 20 ~Al~~y~~aL~~--~p~~~~~~~~ra~~~~~l~~~~~Al~~~~~al~l~p~~ 69 (374)
.+...|...... .-..+.+|...|..+...|+|.+|...|..+++....-
T Consensus 132 ~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 183 (223)
T 4aez_C 132 EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKP 183 (223)
T ss_dssp CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBS
T ss_pred CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 455555554443 44558889999999999999999999999999987654
No 377
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=21.02 E-value=1.3e+02 Score=26.72 Aligned_cols=13 Identities=15% Similarity=0.059 Sum_probs=5.8
Q ss_pred hcCHHHHHHHHHH
Q 017264 83 LEEYETAKVALEK 95 (374)
Q Consensus 83 lg~~~eA~~~~~~ 95 (374)
+++.++|....++
T Consensus 191 ln~~~~Ac~lAk~ 203 (260)
T 1o9d_A 191 LNSPDRACNLAKQ 203 (260)
T ss_dssp SCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 4555444443333
No 378
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=20.84 E-value=2.1e+02 Score=29.03 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=21.1
Q ss_pred HHHHHHHH--HHhcCHHHHHHHHHHHHhcCCCC
Q 017264 73 YWRKATAC--MKLEEYETAKVALEKGASLAPGD 103 (374)
Q Consensus 73 ~~~lg~~~--~~lg~~~eA~~~~~~a~~l~p~~ 103 (374)
++.+...+ ++.|+|..|+..+++ +.+-|-+
T Consensus 539 Ll~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 539 LLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 34444444 899999999999997 4466654
No 379
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=20.73 E-value=33 Score=24.71 Aligned_cols=21 Identities=33% Similarity=0.379 Sum_probs=18.3
Q ss_pred CHHHHHHhhhhhhhcCCeeee
Q 017264 328 DEDTRRAMKKSFVESNGTVLS 348 (374)
Q Consensus 328 d~d~kram~Ks~~eS~gt~ls 348 (374)
|+|-||||-=|..||+|...|
T Consensus 12 DeDLkrAieLSL~Es~~~~~~ 32 (81)
T 1q0v_A 12 EELIRKAIELSLKESRNSASS 32 (81)
T ss_dssp HHHHHHHHHHHHHCCCCCSCC
T ss_pred hHHHHHHHHHhHHHHcCCCCC
Confidence 678999999999999988543
No 380
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=20.48 E-value=1.2e+02 Score=23.09 Aligned_cols=27 Identities=15% Similarity=0.019 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhccCHHHHHHHHHHH
Q 017264 2 ATDLEKKAKEAFIDDYFELAYDLYSQA 28 (374)
Q Consensus 2 a~~l~~~g~~~~~~~~y~~Al~~y~~a 28 (374)
|+.+...|..+.+.|+|++|-+++.+|
T Consensus 22 Ars~~~eAl~~Ak~gdfe~A~~~l~eA 48 (109)
T 3k1s_A 22 ARSFAMEALQFAKQGKMAEADEAMVKA 48 (109)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 455667777888888888888888775
Done!