Query 017265
Match_columns 374
No_of_seqs 280 out of 1873
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:39:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 6.1E-51 2.1E-55 390.2 26.1 255 80-370 47-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.2E-50 4.2E-55 389.0 18.5 254 81-370 53-383 (383)
3 2apr_A Rhizopuspepsin; hydrola 100.0 3.8E-49 1.3E-53 371.9 21.9 256 79-370 5-324 (325)
4 1tzs_A Cathepsin E; hydrolase, 100.0 9.4E-49 3.2E-53 373.1 23.0 257 82-373 16-345 (351)
5 3vla_A EDGP; extracellular, in 100.0 9.2E-49 3.1E-53 379.8 23.1 268 85-369 16-398 (413)
6 4aa9_A Chymosin; hydrolase, as 100.0 1E-48 3.5E-53 368.5 20.0 254 81-370 3-320 (320)
7 3c9x_A Trichoderma reesei aspa 100.0 2.3E-48 8E-53 367.2 22.4 254 84-369 10-329 (329)
8 3cms_A Chymosin B; hydrolase, 100.0 9.8E-49 3.4E-53 368.9 19.1 254 81-370 6-323 (323)
9 1dpj_A Proteinase A; proteinas 100.0 2.4E-48 8.1E-53 367.2 21.2 253 82-370 6-329 (329)
10 1am5_A Pepsin, acid proteinase 100.0 2.2E-48 7.5E-53 366.7 20.7 251 83-370 6-324 (324)
11 1j71_A Candidapepsin, aspartic 100.0 2.7E-48 9.3E-53 367.5 20.6 252 81-373 4-327 (334)
12 1oew_A Endothiapepsin; hydrola 100.0 3.3E-48 1.1E-52 366.1 20.0 253 84-369 10-329 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 4.7E-48 1.6E-52 369.8 20.4 259 82-373 11-358 (361)
14 3aup_A SBG7S, BG, basic 7S glo 100.0 1.9E-47 6.6E-52 370.5 24.9 275 85-374 17-397 (403)
15 2qzx_A Candidapepsin-5; aspart 100.0 3.6E-48 1.2E-52 367.9 18.9 254 81-373 4-334 (342)
16 1htr_B Gastricsin; aspartyl pr 100.0 8.7E-48 3E-52 363.4 21.0 251 84-370 7-329 (329)
17 2bju_A Plasmepsin II; aspartic 100.0 7.4E-48 2.5E-52 375.8 20.6 253 82-370 131-450 (453)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.2E-47 4E-52 364.0 21.0 254 80-373 3-332 (339)
19 1qdm_A Prophytepsin; aspartic 100.0 6.5E-47 2.2E-51 372.6 26.7 260 81-370 44-478 (478)
20 3k1w_A Renin; protease, altern 100.0 1E-47 3.5E-52 364.7 18.3 254 81-370 10-340 (341)
21 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-47 4.7E-52 364.0 18.7 254 81-373 4-334 (342)
22 1miq_A Plasmepsin; aspartic pr 100.0 7.3E-47 2.5E-51 362.6 21.1 254 81-370 54-374 (375)
23 3qvc_A Histo-aspartic protease 100.0 6.7E-47 2.3E-51 369.4 20.8 254 80-370 128-449 (451)
24 1yg9_A Aspartic protease BLA G 100.0 8.7E-47 3E-51 356.5 20.3 253 81-370 9-329 (330)
25 1ibq_A Aspergillopepsin; aspar 100.0 3.2E-46 1.1E-50 351.9 23.0 251 84-370 9-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 3.2E-46 1.1E-50 351.5 19.6 250 85-370 11-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 2.4E-46 8.1E-51 352.6 15.3 251 84-370 10-323 (323)
28 3lpj_A Beta-secretase 1; alzhe 100.0 1E-44 3.5E-49 356.6 24.8 258 86-373 71-423 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 5.6E-44 1.9E-48 344.2 24.4 259 85-373 9-358 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 2.2E-43 7.4E-48 342.2 24.4 257 87-373 26-377 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 3.5E-43 1.2E-47 339.9 25.4 257 86-373 18-370 (395)
32 1t6e_X Xylanase inhibitor; two 100.0 3.8E-43 1.3E-47 338.0 23.0 265 85-373 10-380 (381)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.4E-43 1.2E-47 333.4 19.1 245 82-373 5-336 (340)
34 1b5f_A Protein (cardosin A); h 100.0 1.5E-31 5.2E-36 240.7 12.1 170 81-276 5-237 (239)
35 1lya_B Cathepsin D; lysosomal 99.9 1.1E-26 3.7E-31 209.4 14.5 166 197-370 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.9E-24 9.9E-29 164.7 8.1 89 82-191 6-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 1.4E-18 4.7E-23 130.7 7.9 75 293-370 6-87 (87)
38 2i1a_A DNA damage-inducible pr 92.1 0.12 4.2E-06 41.5 4.0 94 249-367 37-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 91.5 0.14 4.7E-06 41.4 3.6 99 248-369 34-135 (148)
40 2hs1_A HIV-1 protease; ultra-h 88.4 0.58 2E-05 34.8 4.5 29 92-122 10-38 (99)
41 1fmb_A EIAV protease; hydrolas 88.2 0.49 1.7E-05 35.6 4.0 28 90-119 8-35 (104)
42 3ec0_A Protease; HIV-2, inhibi 86.0 0.95 3.2E-05 33.6 4.4 28 92-121 10-37 (99)
43 2i1a_A DNA damage-inducible pr 85.3 0.84 2.9E-05 36.4 4.3 31 87-119 23-53 (148)
44 3liy_A Protease; hydrolase, hy 83.6 1.1 3.7E-05 34.0 3.8 32 92-123 12-46 (116)
45 2hah_A Protease, retropepsin; 81.6 1.3 4.6E-05 33.8 3.8 28 90-120 14-41 (116)
46 3s8i_A Protein DDI1 homolog 1; 78.8 1.7 6E-05 34.8 3.8 31 88-120 22-52 (148)
47 3sqf_A Protease; folded monome 78.1 2.1 7.3E-05 32.5 3.8 31 91-123 10-40 (114)
48 3slz_A GAG-Pro-POL polyprotein 70.2 5.4 0.00018 31.2 4.5 29 89-119 21-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 65.5 5.4 0.00019 33.6 3.8 27 91-119 9-35 (203)
50 2rsp_A RSV protease; hydrolase 64.8 6.7 0.00023 30.2 4.0 24 97-122 27-50 (124)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.0 20 0.00069 30.1 3.8 27 91-119 113-139 (203)
52 3c9x_A Trichoderma reesei aspa 40.1 29 0.00098 31.3 4.7 39 83-121 187-231 (329)
53 1bxo_A Protein (penicillopepsi 37.4 29 0.00098 31.2 4.2 40 82-121 182-225 (323)
54 1ibq_A Aspergillopepsin; aspar 34.7 40 0.0014 30.2 4.7 40 82-121 181-226 (325)
55 1oew_A Endothiapepsin; hydrola 34.7 33 0.0011 30.8 4.2 40 82-121 185-230 (329)
56 2apr_A Rhizopuspepsin; hydrola 33.7 36 0.0012 30.5 4.2 39 82-120 186-229 (325)
57 1b5f_A Protein (cardosin A); h 32.3 46 0.0016 28.3 4.5 32 89-120 188-227 (239)
58 1izd_A Aspartic proteinase; su 31.3 39 0.0013 30.3 4.0 35 87-121 187-226 (323)
59 1lya_B Cathepsin D; lysosomal 26.2 59 0.002 27.5 4.1 33 89-121 99-138 (241)
60 3aup_A SBG7S, BG, basic 7S glo 22.3 57 0.0019 30.2 3.4 15 106-120 262-276 (403)
61 1mpp_A Pepsin; hydrolase(acid 21.2 1E+02 0.0034 27.9 4.8 33 90-122 210-250 (361)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.1e-51 Score=390.24 Aligned_cols=255 Identities=25% Similarity=0.443 Sum_probs=209.2
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (374)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (374)
..++.++.|.+|+++|.||||||++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 47 ~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~------------ 112 (370)
T 3psg_A 47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS------------ 112 (370)
T ss_dssp CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE------------
T ss_pred eecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC------------
Confidence 456667899999999999999999999999999999999999984445 678999999999999987
Q ss_pred CCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------h
Q 017265 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------L 231 (374)
Q Consensus 160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~ 231 (374)
+.|.+.|++|+. +|.+++|+|+|++. .++++.|||++...+. + ...+|||||||++.++ +
T Consensus 113 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 180 (370)
T 3psg_A 113 ------QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV 180 (370)
T ss_dssp ------EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCH
Confidence 999999999995 59999999999986 8999999999988763 4 5678999999998765 3
Q ss_pred hHHhhhh-----------------------cCCc----------------------e-----e-----cCCCCCcEEEec
Q 017265 232 ISQMRTT-----------------------IAGN----------------------Q-----R-----LGVSTPDIVIDS 256 (374)
Q Consensus 232 ~~ql~~~-----------------------~~~~----------------------k-----~-----~~~~~~~~iiDS 256 (374)
+.+|..+ ||+. + . .......+||||
T Consensus 181 ~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiDT 260 (370)
T 3psg_A 181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDT 260 (370)
T ss_dssp HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECT
T ss_pred HHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCCCceEEEcC
Confidence 3343321 2221 0 0 112456899999
Q ss_pred cccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-E
Q 017265 257 GTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-F 335 (374)
Q Consensus 257 Gtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i 335 (374)
||+++++|++++++|.+++.+. ....+.+.+ +|+... .+|+|+|+|+|++++||+++|+++ . +..|+. |
T Consensus 261 GTs~~~lP~~~~~~i~~~i~a~----~~~~g~~~v-~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~-~~~C~~~~ 330 (370)
T 3psg_A 261 GTSLLTGPTSAIANIQSDIGAS----ENSDGEMVI-SCSSID---SLPDIVFTIDGVQYPLSPSAYILQ-D-DDSCTSGF 330 (370)
T ss_dssp TCCSEEEEHHHHHHHHHHTTCE----ECTTCCEEC-CGGGGG---GCCCEEEEETTEEEEECHHHHEEE-C-SSCEEESE
T ss_pred CCCcEECCHHHHHHHHHHhCCc----ccCCCcEEE-ECCCcc---cCCcEEEEECCEEEEECHHHhccc-C-CCEEEEEE
Confidence 9999999999999998777543 222344444 598765 789999999999999999999998 3 346998 8
Q ss_pred EcCC-----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 336 KGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 336 ~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
+..+ +..||||++|||++|+|||++++|||||+++
T Consensus 331 ~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 331 EGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 7632 2369999999999999999999999999974
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=389.03 Aligned_cols=254 Identities=21% Similarity=0.363 Sum_probs=207.7
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCccccCCCCccccCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~--~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 158 (374)
.++.++.+.+|+++|.||||||+|.|+|||||+++||+|..|.. ..|. .++.|||++|+||+..+
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~~----------- 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG----------- 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEEE-----------
T ss_pred EeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEECC-----------
Confidence 44556789999999999999999999999999999999999962 3684 67899999999999987
Q ss_pred CCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcchh-----
Q 017265 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL----- 231 (374)
Q Consensus 159 ~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s~----- 231 (374)
|.|.+.|++|+.. |.+++|+|+|++. .++ +.|||++...+. | ...+|||||||++.++.
T Consensus 120 -------~~~~i~Yg~Gs~~-G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -------TELTLRYSTGTVS-GFLSQDIITVGGI-----TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -------EEEEEECSSCEEE-EEEEEEEEEETTE-----EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCccEE-EEEEeeEEEEcCc-----eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCc
Confidence 9999999999855 9999999999986 888 999999987653 3 56889999999987752
Q ss_pred -hHHhhhh---------------------------cCCc---------------------------eec-----CCCCCc
Q 017265 232 -ISQMRTT---------------------------IAGN---------------------------QRL-----GVSTPD 251 (374)
Q Consensus 232 -~~ql~~~---------------------------~~~~---------------------------k~~-----~~~~~~ 251 (374)
+.+|..+ ||+. +.. ......
T Consensus 186 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~ 265 (383)
T 2x0b_A 186 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCL 265 (383)
T ss_dssp HHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCBSTTCEE
T ss_pred HHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEEcCCCcE
Confidence 2333221 1111 000 123467
Q ss_pred EEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC--C
Q 017265 252 IVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--D 329 (374)
Q Consensus 252 ~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~ 329 (374)
+||||||+++++|.+++++|.+++.+.. ..+.+.+ +|+... .+|+|+|+|+|++|+|++++|+++... +
T Consensus 266 aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v-~C~~~~---~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~ 336 (383)
T 2x0b_A 266 ALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVV-KCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSK 336 (383)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEE-EGGGTT---TCCCEEEEETTEEEEECHHHHBCCCCCCTT
T ss_pred EEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEE-eccccc---cCceEEEEECCEEEEECHHHhEeeccCCCC
Confidence 9999999999999999999988876432 3444545 599765 789999999999999999999987653 4
Q ss_pred eEEEE-EEcCC-----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 330 IVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 330 ~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
..|+. |+..+ .+.||||++|||++|+|||++++|||||+++
T Consensus 337 ~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 337 KLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp SEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 58997 87642 4689999999999999999999999999874
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.8e-49 Score=371.94 Aligned_cols=256 Identities=25% Similarity=0.379 Sum_probs=210.9
Q ss_pred CcccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCC
Q 017265 79 ASQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (374)
Q Consensus 79 ~~~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 158 (374)
.+.......+.+|+++|.||||+|++.|+|||||+++||+|..|. .| .+.++.|||++|+||+...
T Consensus 5 ~v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~c-~~~~~~y~~~~SsT~~~~~----------- 70 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--NC-GSGQTKYDPNQSSTYQADG----------- 70 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--SC-CTTSCCBCGGGCTTCEEEE-----------
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--hH-hcCCCCCCcccCCCeeeCC-----------
Confidence 344555778999999999999999999999999999999999998 77 6788999999999999865
Q ss_pred CCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc-CccccceeecCCCcch-------
Q 017265 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS------- 230 (374)
Q Consensus 159 ~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s------- 230 (374)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.| ....+||||||++..+
T Consensus 71 -------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~ 138 (325)
T 2apr_A 71 -------RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKT 138 (325)
T ss_dssp -------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCC
T ss_pred -------CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCC
Confidence 999999999997779999999999986 89999999999876655 4559999999998764
Q ss_pred hhHHhhhh------------------------cCCc---e---------e----------------c---CCCCCcEEEe
Q 017265 231 LISQMRTT------------------------IAGN---Q---------R----------------L---GVSTPDIVID 255 (374)
Q Consensus 231 ~~~ql~~~------------------------~~~~---k---------~----------------~---~~~~~~~iiD 255 (374)
++.+|..+ ||+. + . . ......+|||
T Consensus 139 ~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiD 218 (325)
T 2apr_A 139 PMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILD 218 (325)
T ss_dssp HHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEEC
T ss_pred HHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEe
Confidence 44454332 1111 0 0 0 0124579999
Q ss_pred ccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-
Q 017265 256 SGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV- 334 (374)
Q Consensus 256 SGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~- 334 (374)
|||++++||+++|+++++++.+.+... +.+.+ +|+.. .+|+|+|+|+|.+++||+++|+++.. +..|++
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~-~C~~~----~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~~ 288 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDNGD----GTYTI-SCDTS----AFKPLVFSINGASFQVSPDSLVFEEF-QGQCIAG 288 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEE-CSCGG----GCCCEEEEETTEEEEECGGGGEEEEE-TTEEEES
T ss_pred cCCccEECCHHHHHHHHHHHhcccCCC----CeEEE-ECCCC----CCCcEEEEECCEEEEECHHHEEEcCC-CCeEEEE
Confidence 999999999999999999988765432 23334 59842 48999999999899999999998754 568998
Q ss_pred EEcCCCCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 335 FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 335 i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
|+....+.||||++|||++|+|||++++|||||+++
T Consensus 289 i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 289 FGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 776545789999999999999999999999999864
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.4e-49 Score=373.09 Aligned_cols=257 Identities=25% Similarity=0.442 Sum_probs=206.7
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C 161 (374)
++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 16 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 79 (351)
T 1tzs_A 16 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQPG-------------- 79 (351)
T ss_dssp TTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBCCS--------------
T ss_pred eceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEECC--------------
Confidence 3445678999999999999999999999999999999999975567 467899999999999987
Q ss_pred CCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------hhH
Q 017265 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LIS 233 (374)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ 233 (374)
|.|.+.|++|+. +|.+++|+|+|++. .++++.|||++...+. | ....+||||||++.++ ++.
T Consensus 80 ----~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 149 (351)
T 1tzs_A 80 ----QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFD 149 (351)
T ss_dssp ----CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHH
T ss_pred ----CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHH
Confidence 899999999985 59999999999986 8999999999987663 3 5678999999998765 334
Q ss_pred Hhhhh-------------------------cCCc-------------------------------ee-cCCCCCcEEEec
Q 017265 234 QMRTT-------------------------IAGN-------------------------------QR-LGVSTPDIVIDS 256 (374)
Q Consensus 234 ql~~~-------------------------~~~~-------------------------------k~-~~~~~~~~iiDS 256 (374)
+|..+ ||+. +. .......+||||
T Consensus 150 ~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDS 229 (351)
T 1tzs_A 150 NMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDT 229 (351)
T ss_dssp HHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEECT
T ss_pred HHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEcCCCceEEecc
Confidence 44321 1111 00 112346799999
Q ss_pred cccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC--CeEEEE
Q 017265 257 GTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV 334 (374)
Q Consensus 257 Gtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~ 334 (374)
||+++++|++++++|.+++.+.. .. +.+.+ +|+... .+|+|+|+|+|++++||+++|+++... ...|+.
T Consensus 230 GTs~~~lP~~~~~~l~~~~~~~~----~~-g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~ 300 (351)
T 1tzs_A 230 GTSLITGPSDKIKQLQNAIGAAP----VD-GEYAV-ECANLN---VMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSS 300 (351)
T ss_dssp TCSSEEECHHHHHHHHHHHTCEE----CS-SSEEE-CGGGGG---GSCCEEEEETTEEEEECTTTSEECC-----CCEEE
T ss_pred CCcceeCCHHHHHHHHHHhCCcc----cC-CeEEE-eCCCCc---cCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEE
Confidence 99999999999999988875432 21 33434 599754 689999999999999999999987642 358997
Q ss_pred -EEcCC-----CCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 335 -FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 335 -i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
|+..+ .+.||||++|||++|+|||++++|||||+++|..
T Consensus 301 ~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 301 GFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp SEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred EEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 87642 4689999999999999999999999999999964
No 5
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.2e-49 Score=379.81 Aligned_cols=268 Identities=22% Similarity=0.377 Sum_probs=215.5
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC-----
Q 017265 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK----- 159 (374)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~----- 159 (374)
+..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.+.|.++.|......
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---------------~~Sst~~~v~C~s~~C~~~~~~~~~~c 80 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---------------YVSSTYRPVRCRTSQCSLSGSIACGDC 80 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---------------CCCTTCEECBTTSHHHHHTTCCEEECC
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---------------CCCCCcCccCCCcccccccccCCCccc
Confidence 34688999999999999999999999999999998754 3799999999999999866533
Q ss_pred ------CCCCCcceeeEee-CCCceeeeeEEEEEEEecCCCCC----cccCCceEEeeeeeCC--CCcCccccceeecCC
Q 017265 160 ------SCSGVNCQYSVSY-GDGSFSNGNLATETVTLGSTTGQ----AVALPGITFGCGTNNG--GLFNSKTTGIVGLGG 226 (374)
Q Consensus 160 ------~C~~~~~~~~~~Y-~~gs~~~G~~~~D~v~i~~~~~~----~~~~~~~~fg~~~~~~--~~~~~~~~GilGLg~ 226 (374)
.|..+.|.|.+.| ++|+.+.|.+++|+|+|+..++. .+.++++.|||++... +. ....|||||||+
T Consensus 81 ~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~dGIlGLg~ 159 (413)
T 3vla_A 81 FNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGVVGMAGLGR 159 (413)
T ss_dssp SSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTCCEEEECSS
T ss_pred ccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-ccccccccccCC
Confidence 3555579999999 58887789999999999854332 3578899999999863 33 367899999999
Q ss_pred CcchhhHHhhhh----------------------cCC---------------c-------e--------------e----
Q 017265 227 GDISLISQMRTT----------------------IAG---------------N-------Q--------------R---- 244 (374)
Q Consensus 227 ~~~s~~~ql~~~----------------------~~~---------------~-------k--------------~---- 244 (374)
+.+|++.||..+ ||+ . + .
T Consensus 160 ~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V 239 (413)
T 3vla_A 160 TRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFI 239 (413)
T ss_dssp SSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEE
T ss_pred CCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEE
Confidence 999999997642 111 0 0 0
Q ss_pred ------------cC---------CCCCcEEEeccccccccCHhHHHHHHHHHHhhcc---cCccCCCCCCcccccccCCC
Q 017265 245 ------------LG---------VSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIE---AQPVADPTGSLELCYSFNSL 300 (374)
Q Consensus 245 ------------~~---------~~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~C~~~~~~ 300 (374)
.. .+.+++||||||++++||+++|++|+++|.+++. ..+. .+...++.|+.....
T Consensus 240 ~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~~~~~~~~C~~~~~~ 318 (413)
T 3vla_A 240 GVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-ASVAPFGACFSTDNI 318 (413)
T ss_dssp CCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-CCCTTCSCEEECTTC
T ss_pred EEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-CCCCCCcceeccCCc
Confidence 00 0236799999999999999999999999998764 2222 223345679987432
Q ss_pred ------CCcceEEEEEeC--cEEEEcCceeEEEeCCCeEEEEEEcCC---CCcceechhhhcceEEEEECCCCEEEEecC
Q 017265 301 ------SQVPEVTIHFRG--ADVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 369 (374)
Q Consensus 301 ------~~~P~i~f~f~g--~~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 369 (374)
..+|+|+|+|+| ++|+|++++|+++.+++..|++|.... ...||||+.|||++|+|||++++|||||++
T Consensus 319 ~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 319 LSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp CEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence 268999999998 899999999999876678999976543 258999999999999999999999999964
No 6
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1e-48 Score=368.46 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=205.5
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (374)
.++.++.+.+|+++|.||||+|+++|+|||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 67 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRNLG------------- 67 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-------------
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEcCC-------------
Confidence 34556789999999999999999999999999999999999984446 567999999999999987
Q ss_pred CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------hh
Q 017265 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LI 232 (374)
Q Consensus 161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~ 232 (374)
|.|.+.|++|+. +|.+++|+|+|++. .++++.|||++...+. + ....+||||||++..+ ++
T Consensus 68 -----~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 68 -----KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred -----cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHH
Confidence 999999999995 59999999999986 8999999999988763 4 5678999999997654 44
Q ss_pred HHhhhh----------------------cCCc---------------------------ee-----cCCCCCcEEEeccc
Q 017265 233 SQMRTT----------------------IAGN---------------------------QR-----LGVSTPDIVIDSGT 258 (374)
Q Consensus 233 ~ql~~~----------------------~~~~---------------------------k~-----~~~~~~~~iiDSGt 258 (374)
.+|.++ +|+. +. .......+||||||
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGt 216 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILDTGT 216 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEECTTC
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEECCC
Confidence 444332 1211 00 11235689999999
Q ss_pred cccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EEc
Q 017265 259 TLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKG 337 (374)
Q Consensus 259 t~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~ 337 (374)
+++++|++++++|++++... ....+.+.+ +|+... .+|+|+|+|+|++++||+++|+.+. +..|+. |+.
T Consensus 217 t~~~lP~~~~~~i~~~~~~~----~~~~g~~~~-~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~--~~~C~~~i~~ 286 (320)
T 4aa9_A 217 SVLFGPSSDILKIQMAIGAT----ENRYGEFDV-NCGNLR---SMPTVVFEINGRDYPLSPSAYTSKD--QGFCTSGFQG 286 (320)
T ss_dssp SSEEEEHHHHHHHHHHTTCE----ECTTSCEEE-CGGGGG---GCCCEEEEETTEEEEECHHHHEEEE--TTEEEESEEE
T ss_pred CcEECCHHHHHHHHHHhCCc----ccCCCcEEE-eCCCCC---cCceEEEEECCEEEEECHHHhccCC--CCeEEEEEEc
Confidence 99999999999998877543 222344434 599764 7899999999999999999999873 358997 877
Q ss_pred CC-CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 338 IT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 338 ~~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
.. ++.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 287 DNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 54 4679999999999999999999999999975
No 7
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.3e-48 Score=367.17 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=205.8
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCC
Q 017265 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (374)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~ 163 (374)
..+.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.++.++.|||++|+||+.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~~~~~~y~~~~SsT~~~~~~--------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--KSSATGHAIYTPSKSSTSKKVSG--------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCGGGCTTCEECTT---------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--ccccCCCCcCCcccCcCceEcCC---------------
Confidence 4567889999999999999999999999999999999998 77767889999999999998642
Q ss_pred CcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcch---------hh
Q 017265 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (374)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~ 232 (374)
|.|.+.|++|+.++|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++..+ ++
T Consensus 73 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 145 (329)
T 3c9x_A 73 --ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWF 145 (329)
T ss_dssp --CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHH
Confidence 899999999997779999999999986 89999999999876544 3578999999997665 33
Q ss_pred HHhhhhc-------------------CCc-----------------------e-----e----cCCCCCcEEEecccccc
Q 017265 233 SQMRTTI-------------------AGN-----------------------Q-----R----LGVSTPDIVIDSGTTLT 261 (374)
Q Consensus 233 ~ql~~~~-------------------~~~-----------------------k-----~----~~~~~~~~iiDSGtt~~ 261 (374)
++|..++ |+. + . .......+||||||+++
T Consensus 146 ~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 146 SNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLL 225 (329)
T ss_dssp HHHHTTSSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSE
T ss_pred HHHHHhcCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcE
Confidence 4443321 111 0 0 11234579999999999
Q ss_pred ccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC--CeEEEE-EEcC
Q 017265 262 FLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGI 338 (374)
Q Consensus 262 ~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~ 338 (374)
+||++++++|++++.++... ...+.+.+ +|+. .+|+|+|+|+|++++||+++|+++..+ ...|++ |+..
T Consensus 226 ~lp~~~~~~i~~~i~~a~~~--~~~~~~~~-~C~~-----~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQYD--NQQEGVVF-DCDE-----DLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp EECHHHHHHHHTTCTTCEEE--TTTTEEEE-ETTC-----CCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred eCCHHHHHHHHHhCCCcEEc--CCCCEEEE-ECCC-----CCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 99999999997776433211 11233334 5982 689999999999999999999987632 469998 8876
Q ss_pred C-CCcceechhhhcceEEEEECCCCEEEEecC
Q 017265 339 T-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 369 (374)
Q Consensus 339 ~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 369 (374)
. .+.||||++|||++|+|||++++|||||+.
T Consensus 298 ~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 298 SGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp TTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 4 568999999999999999999999999974
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.8e-49 Score=368.88 Aligned_cols=254 Identities=22% Similarity=0.360 Sum_probs=206.7
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (374)
.++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|....|. .++.|||++|+||+..+
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~------------- 70 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK--NHQRFDPRKSSTFQNLG------------- 70 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE-------------
T ss_pred eeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCccccc--CCCCCCCccCCCeEECC-------------
Confidence 344566889999999999999999999999999999999999534784 67899999999999987
Q ss_pred CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCC-Cc-CccccceeecCCCcch------hh
Q 017265 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LI 232 (374)
Q Consensus 161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------~~ 232 (374)
|.|.+.|++|+. +|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++..+ ++
T Consensus 71 -----~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 139 (323)
T 3cms_A 71 -----KPLSIHYGTGSM-QGILGYDTVTVSNI-----VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVF 139 (323)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHH
T ss_pred -----cEEEEEeCCCCe-EEEEEEEEEEECCe-----EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHH
Confidence 899999999985 59999999999986 899999999998765 33 4578999999998765 33
Q ss_pred HHhhhh----------------------cCCc---------------------------ee-----cCCCCCcEEEeccc
Q 017265 233 SQMRTT----------------------IAGN---------------------------QR-----LGVSTPDIVIDSGT 258 (374)
Q Consensus 233 ~ql~~~----------------------~~~~---------------------------k~-----~~~~~~~~iiDSGt 258 (374)
.+|..+ +|+. +. .......+||||||
T Consensus 140 ~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGT 219 (323)
T 3cms_A 140 DNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGT 219 (323)
T ss_dssp HHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEESTTCEEEEECTTC
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecCCCcEEEEecCC
Confidence 444322 1211 00 11235689999999
Q ss_pred cccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EEc
Q 017265 259 TLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKG 337 (374)
Q Consensus 259 t~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~ 337 (374)
+++++|++++++|++++... ....+.+.+ +|+... .+|+|+|+|+|++++||+++|+++ ++..|+. |+.
T Consensus 220 t~~~lP~~~~~~l~~~~~~~----~~~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~~i~~ 289 (323)
T 3cms_A 220 SKLVGPSSDILNIQQAIGAT----QNQYGEFDI-DCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTSGFQS 289 (323)
T ss_dssp CSEEECHHHHHHHHHHHTCE----EETTTEEEE-CTTCTT---TSCCEEEEETTEEEEECHHHHEEE--ETTEEEESEEE
T ss_pred ccEeCCHHHHHHHHHHhCCe----ecCCCcEEE-ECCCCc---cCceEEEEECCEEEEECHHHhccC--CCCEEEEEEEe
Confidence 99999999999998887543 222233333 598654 789999999999999999999998 3468997 887
Q ss_pred CC-CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 338 IT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 338 ~~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 290 ENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp C---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 64 5789999999999999999999999999874
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.4e-48 Score=367.25 Aligned_cols=253 Identities=25% Similarity=0.443 Sum_probs=205.0
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C 161 (374)
++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 6 ~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 69 (329)
T 1dpj_A 6 PLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKANG-------------- 69 (329)
T ss_dssp ECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred eeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEECC--------------
Confidence 3445678999999999999999999999999999999999983236 457899999999999876
Q ss_pred CCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCC-Cc-CccccceeecCCCcchhh------H
Q 017265 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDISLI------S 233 (374)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s~~------~ 233 (374)
|.|.+.|++|+. +|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++..++. .
T Consensus 70 ----~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 139 (329)
T 1dpj_A 70 ----TEFAIQYGTGSL-EGYISQDTLSIGDL-----TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFY 139 (329)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHH
T ss_pred ----cEEEEEECCceE-EEEEEEEEEEECCe-----EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHH
Confidence 999999999965 59999999999986 899999999998765 34 467899999999876532 2
Q ss_pred Hhhhh--------------------------cCCc----------------------e---------ecCCCCCcEEEec
Q 017265 234 QMRTT--------------------------IAGN----------------------Q---------RLGVSTPDIVIDS 256 (374)
Q Consensus 234 ql~~~--------------------------~~~~----------------------k---------~~~~~~~~~iiDS 256 (374)
+|..+ ||+. + ........+||||
T Consensus 140 ~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDS 219 (329)
T 1dpj_A 140 NAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDT 219 (329)
T ss_dssp HHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEECSSCEEEECT
T ss_pred HHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecCCCccEEeeC
Confidence 22211 1111 0 0112457899999
Q ss_pred cccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-E
Q 017265 257 GTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-F 335 (374)
Q Consensus 257 Gtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i 335 (374)
||+++++|++++++|++++.+. ....+.+.+ +|+... .+|+|+|+|+|++++|++++|+++.. ..|+. |
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~----~~~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~~~~ 289 (329)
T 1dpj_A 220 GTSLITLPSGLAEMINAEIGAK----KGWTGQYTL-DCNTRD---NLPDLIFNFNGYNFTIGPYDYTLEVS--GSCISAI 289 (329)
T ss_dssp TCSCEEECHHHHHHHHHHHTCE----ECTTSSEEE-CGGGGG---GCCCEEEEETTEEEEECTTTSEEEET--TEEEECE
T ss_pred CCCcEECCHHHHHHHHHHhCCc----cCCCCeEEE-ECCCCC---cCCcEEEEECCEEEEECHHHhEecCC--CEEEEEE
Confidence 9999999999999998887543 222334434 498654 78999999999999999999999865 58996 8
Q ss_pred EcC----C-CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 336 KGI----T-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 336 ~~~----~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
+.. . .+.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 290 TPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 764 1 4689999999999999999999999999874
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-48 Score=366.73 Aligned_cols=251 Identities=24% Similarity=0.431 Sum_probs=206.2
Q ss_pred ccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCC
Q 017265 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (374)
Q Consensus 83 ~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~ 162 (374)
+.++.+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 6 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~--------------- 68 (324)
T 1am5_A 6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQAC--SNHNKFKPRQSSTYVETG--------------- 68 (324)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHH--HTSCCBCGGGCTTCEEEE---------------
T ss_pred eecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--cCCCcCCCccCCCeEeCC---------------
Confidence 345678999999999999999999999999999999999974457 457899999999999987
Q ss_pred CCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------hhHH
Q 017265 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQ 234 (374)
Q Consensus 163 ~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~q 234 (374)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. + ....+||||||++..+ ++.+
T Consensus 69 ---~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 139 (324)
T 1am5_A 69 ---KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDN 139 (324)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHh
Confidence 999999999988 59999999999987 8999999999987663 4 5678999999998765 3344
Q ss_pred hhhh-----------------------cCCc-------------------------------eecCCCCCcEEEeccccc
Q 017265 235 MRTT-----------------------IAGN-------------------------------QRLGVSTPDIVIDSGTTL 260 (374)
Q Consensus 235 l~~~-----------------------~~~~-------------------------------k~~~~~~~~~iiDSGtt~ 260 (374)
|.++ +|+. +........+||||||++
T Consensus 140 l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 219 (324)
T 1am5_A 140 MGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAACEGCQAIVDTGTSK 219 (324)
T ss_dssp HHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCCCCEEEEECTTCSS
T ss_pred HHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeeccCceEEEecCCcc
Confidence 4322 1111 000112267999999999
Q ss_pred cccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EEcCC
Q 017265 261 TFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT 339 (374)
Q Consensus 261 ~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~ 339 (374)
+++|++++++|++++.+. ...+.+.+ +|+... .+|+|+|+|+|++++||+++|+++. +..|+. |+..+
T Consensus 220 ~~lp~~~~~~l~~~~~~~-----~~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~~~~~~~ 288 (324)
T 1am5_A 220 IVAPVSALANIMKDIGAS-----ENQGEMMG-NCASVQ---SLPDITFTINGVKQPLPPSAYIEGD--QAFCTSGLGSSG 288 (324)
T ss_dssp EEECTTTHHHHHHHHTCE-----ECCCCEEC-CTTSSS---SSCCEEEEETTEEEEECHHHHEEES--SSCEEECEEECC
T ss_pred EECCHHHHHHHHHHhCCc-----ccCCcEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccC--CCeEEEEEEECc
Confidence 999999999999888654 12333434 598754 7899999999999999999999986 458996 87642
Q ss_pred -----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 340 -----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 340 -----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
.+.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 4579999999999999999999999999874
No 11
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-48 Score=367.54 Aligned_cols=252 Identities=23% Similarity=0.422 Sum_probs=205.3
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecC--CCCC-------CCCCCCCCCCCCCCCCCCccccCCCCc
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~--~c~~-------~~C~~~~~~~y~p~~SsT~~~~~c~~~ 151 (374)
..++...+.+|+++|.||||+|++.|+|||||+++||+|. .|.. ..| ..++.|||++|+||+..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (334)
T 1j71_A 4 PTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQNLN---- 77 (334)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCcccCC----
Confidence 4456667889999999999999999999999999999876 6751 146 467899999999999987
Q ss_pred cccCCCCCCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcc--
Q 017265 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (374)
Q Consensus 152 ~C~~~~~~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (374)
|.|.+.|++|+.++|.+++|+|+|++. .++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (334)
T 1j71_A 78 --------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTS-----VDQGIMGIGFTADEA 133 (334)
T ss_dssp --------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGSS
T ss_pred --------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecC-----CCccEEEEcCCcccC
Confidence 999999999998779999999999986 89999999999753 5789999999865
Q ss_pred ------hhhHHhhhh-----------------------cCCc---e----e--------------------c---CCCCC
Q 017265 230 ------SLISQMRTT-----------------------IAGN---Q----R--------------------L---GVSTP 250 (374)
Q Consensus 230 ------s~~~ql~~~-----------------------~~~~---k----~--------------------~---~~~~~ 250 (374)
+++.||..+ ||+. + . . .....
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~ 213 (334)
T 1j71_A 134 GYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVSTNA 213 (334)
T ss_dssp TTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEEEE
T ss_pred ccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccCCc
Confidence 456666432 1111 0 0 0 01124
Q ss_pred cEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEE-eCcEEEEcCceeEEEeCCC
Q 017265 251 DIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKVSED 329 (374)
Q Consensus 251 ~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f-~g~~~~l~~~~~~~~~~~~ 329 (374)
.+||||||++++||++++++|++++.+... .....+.+.+|+ .+|+|+|+| +|++++||+++|+++..++
T Consensus 214 ~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~------~~p~i~f~f~~g~~~~i~~~~y~~~~~~~ 284 (334)
T 1j71_A 214 DVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD------LSGDAVFNFDQGVKITVPLSELILKDSDS 284 (334)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC------CCSEEEEEESTTCEEEEEGGGGEEECSSS
T ss_pred cEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC------CCCceEEEEcCCcEEEECHHHheeecCCC
Confidence 689999999999999999999999876542 111233315698 589999999 5799999999999987554
Q ss_pred eEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 330 IVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 330 ~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
..|++ |... +.||||+.|||++|+|||++++|||||+++|++
T Consensus 285 ~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 285 SICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp SCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred CeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 46998 7765 579999999999999999999999999999975
No 12
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.3e-48 Score=366.13 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=203.1
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCC
Q 017265 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (374)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~ 163 (374)
....+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.+ .++.|||++|+||+.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~-~~~~y~~~~SsT~~~~~~--------------- 71 (329)
T 1oew_A 10 IDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--ASEV-XQTIYTPSKSTTAKLLSG--------------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--GGGC--CCCBCGGGCTTCEEEEE---------------
T ss_pred cCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--cccc-ccCccCCccCccceecCC---------------
Confidence 3457889999999999999999999999999999999998 7765 788999999999998642
Q ss_pred CcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcch---------hh
Q 017265 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (374)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~ 232 (374)
|.|.+.|++|+.++|.+++|+|+|++. .++++.|||++...+.+ ....+||||||++.++ ++
T Consensus 72 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 144 (329)
T 1oew_A 72 --ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFF 144 (329)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHH
Confidence 899999999997779999999999986 89999999999876544 3578999999998665 33
Q ss_pred HHhhhhc-------------------CCc-----------------------e-----ecC----CCCCcEEEecccccc
Q 017265 233 SQMRTTI-------------------AGN-----------------------Q-----RLG----VSTPDIVIDSGTTLT 261 (374)
Q Consensus 233 ~ql~~~~-------------------~~~-----------------------k-----~~~----~~~~~~iiDSGtt~~ 261 (374)
++|..++ |+. + ... .....+||||||+++
T Consensus 145 ~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 224 (329)
T 1oew_A 145 DNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLL 224 (329)
T ss_dssp HHHTTTSSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSE
T ss_pred HHHHHhccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCE
Confidence 4444322 111 0 000 123579999999999
Q ss_pred ccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CCeEEEE-EEcC
Q 017265 262 FLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGI 338 (374)
Q Consensus 262 ~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i~~~ 338 (374)
++|++++++|++++.++... ...+.+.+ +|+. .+|+|+|+|+|++++||+++|+++.. +...|++ |+..
T Consensus 225 ~lP~~~~~~l~~~i~~a~~~--~~~g~~~~-~C~~-----~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 296 (329)
T 1oew_A 225 YLPATVVSAYWAQVSGAKSS--SSVGGYVF-PCSA-----TLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSS 296 (329)
T ss_dssp EECHHHHHHHHTTSTTCEEE--TTTTEEEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEES
T ss_pred ECCHHHHHHHHHhCCCcEEc--CCCCEEEE-ECCC-----CCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeC
Confidence 99999999997776433211 11223334 5982 68999999999999999999998763 2468998 8876
Q ss_pred C-CCcceechhhhcceEEEEEC-CCCEEEEecC
Q 017265 339 T-NSVPIYGNIMQTNFLVGYDI-EQQTVSFKPT 369 (374)
Q Consensus 339 ~-~~~~ilG~~fl~~~y~vfD~-~~~riGfa~~ 369 (374)
. .+.||||++|||++|+|||+ +++|||||+.
T Consensus 297 ~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 297 AGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp TTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 4 56899999999999999999 9999999974
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.7e-48 Score=369.78 Aligned_cols=259 Identities=21% Similarity=0.332 Sum_probs=210.4
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (374)
++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|. ...|. .++.|||++|+||+...
T Consensus 11 ~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------- 75 (361)
T 1mpp_A 11 GLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKETD------------- 75 (361)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEEEE-------------
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEecC-------------
Confidence 334567899999999999999999999999999999999997 55784 57899999999999987
Q ss_pred CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCC------Cc-CccccceeecCCCcchhh-
Q 017265 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG------LF-NSKTTGIVGLGGGDISLI- 232 (374)
Q Consensus 161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GilGLg~~~~s~~- 232 (374)
|.|.+.|++|++ .|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++..
T Consensus 76 -----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 144 (361)
T 1mpp_A 76 -----YNLNITYGTGGA-NGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAME 144 (361)
T ss_dssp -----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHH
T ss_pred -----CeEEEEECCceE-EEEEEEEEEEECCE-----EEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccc
Confidence 899999999995 59999999999986 899999999998755 34 567899999999866543
Q ss_pred -----------HHhhhh----------------------cCCc-----------------e----e----------c---
Q 017265 233 -----------SQMRTT----------------------IAGN-----------------Q----R----------L--- 245 (374)
Q Consensus 233 -----------~ql~~~----------------------~~~~-----------------k----~----------~--- 245 (374)
.+|.++ ||+. . . .
T Consensus 145 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~ 224 (361)
T 1mpp_A 145 AEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSD 224 (361)
T ss_dssp HHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEE
T ss_pred ccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCee
Confidence 344322 1111 0 0 0
Q ss_pred --CCCCCcEE-EeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCc-ceEEEEE--e-----CcE
Q 017265 246 --GVSTPDIV-IDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQV-PEVTIHF--R-----GAD 314 (374)
Q Consensus 246 --~~~~~~~i-iDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-P~i~f~f--~-----g~~ 314 (374)
......+| |||||++++||++++++|++++..... ...+.+ ..+|+... .+ |+|+|+| + |++
T Consensus 225 ~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~g~~-~~~C~~~~---~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 225 AVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQQGY-TVPCSKYQ---DSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp EEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EETTEE-EEEHHHHT---TCCCEEEEEEECTTCSSCEEE
T ss_pred eccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCCCcE-EEECCCcc---cCCCcEEEEEEcCCcCCCCeE
Confidence 01235689 999999999999999999988865421 112333 34599654 67 9999999 7 799
Q ss_pred EEEcCceeEEEeC-CCeEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 315 VKLSRSNFFVKVS-EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 315 ~~l~~~~~~~~~~-~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
++||+++|+++.. ++..|+. |++...+.||||++|||++|+|||++++|||||+++|+.
T Consensus 298 ~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 298 VSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp EEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred EEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 9999999999875 3568996 887545789999999999999999999999999999974
No 14
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.9e-47 Score=370.51 Aligned_cols=275 Identities=20% Similarity=0.343 Sum_probs=211.2
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC-----
Q 017265 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK----- 159 (374)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~----- 159 (374)
++.+.+|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.+.|.++.|......
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---------------~~Sst~~~~~C~s~~C~~~~~~~c~~c 81 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---------------YSSKTYQAPFCHSTQCSRANTHQCLSC 81 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---------------CCCSSCBCCCTTBHHHHHTTCCCEEEC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---------------CCCCCCCccCCCCccccCccccCcccc
Confidence 45788999999999999999999999999999998653 3789999999999999765432
Q ss_pred ------CCCCCcceeeEeeC-CCceeeeeEEEEEEEecCCCCCc------ccCCceEEeeeeeCCCC-c-Cccccceeec
Q 017265 160 ------SCSGVNCQYSVSYG-DGSFSNGNLATETVTLGSTTGQA------VALPGITFGCGTNNGGL-F-NSKTTGIVGL 224 (374)
Q Consensus 160 ------~C~~~~~~~~~~Y~-~gs~~~G~~~~D~v~i~~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GilGL 224 (374)
.|....|.|.+.|+ ||+.+.|.+++|+|+|++.++.. +.++++.|||++..... + ....+|||||
T Consensus 82 ~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGL 161 (403)
T 3aup_A 82 PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGL 161 (403)
T ss_dssp SSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEEC
T ss_pred CCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEEC
Confidence 35445799999998 78877899999999998843322 58899999999986433 3 4678999999
Q ss_pred CCCcchhhHHhhhh----------------------cC----------C-----c--------e----------------
Q 017265 225 GGGDISLISQMRTT----------------------IA----------G-----N--------Q---------------- 243 (374)
Q Consensus 225 g~~~~s~~~ql~~~----------------------~~----------~-----~--------k---------------- 243 (374)
|++.++++.||+.. || + . .
T Consensus 162 g~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g 241 (403)
T 3aup_A 162 GHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQ 241 (403)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETT
T ss_pred CCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEEEEEECC
Confidence 99999998886431 11 1 1 0
Q ss_pred -ec-C-C---------CCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEe
Q 017265 244 -RL-G-V---------STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFR 311 (374)
Q Consensus 244 -~~-~-~---------~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~ 311 (374)
.. . . +.+.+||||||++++||+++|++|+++|.++++..........+..|+.......+|+|+|+|+
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~f~f~ 321 (403)
T 3aup_A 242 HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMD 321 (403)
T ss_dssp EEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEEEEES
T ss_pred EEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEEEEEc
Confidence 01 1 0 1235999999999999999999999999877643111011111223554322226899999999
Q ss_pred Cc---EEEEcCceeEEEeCCCeEEEEEEcCC---CCcceechhhhcceEEEEECCCCEEEE-------ecCCCCCC
Q 017265 312 GA---DVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSF-------KPTDCTKQ 374 (374)
Q Consensus 312 g~---~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGf-------a~~~C~~~ 374 (374)
|. +|+|++++|+++..++..|++|+..+ .+.||||+.|||++|+|||++++|||| ++++|+++
T Consensus 322 g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~ 397 (403)
T 3aup_A 322 KPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADL 397 (403)
T ss_dssp STTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGGS
T ss_pred CCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCcccc
Confidence 85 99999999999876567999987764 258999999999999999999999999 78888763
No 15
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.6e-48 Score=367.89 Aligned_cols=254 Identities=21% Similarity=0.406 Sum_probs=204.6
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecC--CCCC-------CCCCCCCCCCCCCCCCCCccccCCCCc
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~--~c~~-------~~C~~~~~~~y~p~~SsT~~~~~c~~~ 151 (374)
..++...+.+|+++|.||||+|++.|+|||||+++||+|. .|.. ..| ..++.|||++|+||+..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 4 AVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCcccCC----
Confidence 4455667889999999999999999999999999999866 6751 246 467899999999999987
Q ss_pred cccCCCCCCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcc--
Q 017265 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (374)
Q Consensus 152 ~C~~~~~~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (374)
|.|.+.|++|+.++|.+++|+|+|++. .++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 78 --------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTS-----ARKGILGIGFQSGEA 133 (342)
T ss_dssp --------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEEC-----SSSCEEECSCGGGCS
T ss_pred --------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecC-----CCcCEEEEccccccC
Confidence 999999999998779999999999986 89999999999763 5789999999765
Q ss_pred ------hhhHHhhhh-----------------------cCCc---e-------------------e-----c---CCCCC
Q 017265 230 ------SLISQMRTT-----------------------IAGN---Q-------------------R-----L---GVSTP 250 (374)
Q Consensus 230 ------s~~~ql~~~-----------------------~~~~---k-------------------~-----~---~~~~~ 250 (374)
+++.||..+ ||+. | . . .....
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~ 213 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDANT 213 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEE
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCCCc
Confidence 456666432 1111 0 0 0 01124
Q ss_pred cEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEE-eCcEEEEcCceeEEEeC--
Q 017265 251 DIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKVS-- 327 (374)
Q Consensus 251 ~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f-~g~~~~l~~~~~~~~~~-- 327 (374)
.+||||||++++||++++++|++++.+.........+.+.+ +|+ .+|+|+|+| +|++++||+++|+++..
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~-~C~------~~p~i~f~f~~g~~~~i~~~~~~~~~~~~ 286 (342)
T 2qzx_A 214 NVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVA-DCK------TSGTIDFQFGNNLKISVPVSEFLFQTYYT 286 (342)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEE-CTT------CCCEEEEEETTTEEEEEEGGGGEECCBCT
T ss_pred CEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEE-ECC------CCCcEEEEECCCcEEEEcHHHhccccccc
Confidence 68999999999999999999999987664322111123334 597 579999999 57999999999999742
Q ss_pred ---CCeEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 328 ---EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 328 ---~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
++..|++ |... +.||||++|||++|+|||++++|||||+++|++
T Consensus 287 ~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 287 SGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp TSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 2357998 7765 479999999999999999999999999999975
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=8.7e-48 Score=363.37 Aligned_cols=251 Identities=28% Similarity=0.479 Sum_probs=205.7
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCC
Q 017265 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (374)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~ 163 (374)
+.+.+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 7 l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~---------------- 68 (329)
T 1htr_B 7 MAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQAC--TSHSRFNPSESSTYSTNG---------------- 68 (329)
T ss_dssp GGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE----------------
T ss_pred eEEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCccc--CCCCcCCCccCCCeEECC----------------
Confidence 33788999999999999999999999999999999999973347 457899999999999987
Q ss_pred CcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------hhHHh
Q 017265 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM 235 (374)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql 235 (374)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+. | ....+||||||++..+ ++.+|
T Consensus 69 --~~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 69 --QTFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp --EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred --cEEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 999999999987 59999999999986 8999999999987663 4 5678999999998765 34444
Q ss_pred hhh------------------------cCCc-------------------------------eec--CCCCCcEEEeccc
Q 017265 236 RTT------------------------IAGN-------------------------------QRL--GVSTPDIVIDSGT 258 (374)
Q Consensus 236 ~~~------------------------~~~~-------------------------------k~~--~~~~~~~iiDSGt 258 (374)
.++ +|+. +.. ......+||||||
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGT 220 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGT 220 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTC
T ss_pred HhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCC
Confidence 322 1111 000 1234579999999
Q ss_pred cccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EEc
Q 017265 259 TLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKG 337 (374)
Q Consensus 259 t~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~ 337 (374)
+++++|++++++|++++.+.. ...+.+.+ +|+... .+|+|+|+|+|++++||+++|+++.. + .|+. |+.
T Consensus 221 t~~~lp~~~~~~l~~~~~~~~----~~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~~~~ 290 (329)
T 1htr_B 221 SLLTVPQQYMSALLQATGAQE----DEYGQFLV-NCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVGVEP 290 (329)
T ss_dssp CSEEEEGGGHHHHHHHHTCEE----CTTSCEEE-CGGGGG---GSCCEEEEETTEEEEECHHHHEEECS-S-CEEESEEE
T ss_pred ccEECCHHHHHHHHHHhCCee----cCCCeEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccCC-C-EEEEEEEE
Confidence 999999999999988886542 12333434 599754 78999999999999999999999876 3 8997 876
Q ss_pred CC-----CC-cceechhhhcceEEEEECCCCEEEEecCC
Q 017265 338 IT-----NS-VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 338 ~~-----~~-~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
.+ ++ .||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 291 TYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 42 34 79999999999999999999999999874
No 17
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.4e-48 Score=375.76 Aligned_cols=253 Identities=20% Similarity=0.372 Sum_probs=205.1
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C 161 (374)
++.++.+.+|+++|.||||||++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 131 ~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~~~-------------- 194 (453)
T 2bju_A 131 ELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEKDG-------------- 194 (453)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEEEE--------------
T ss_pred eeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeECC--------------
Confidence 3445688999999999999999999999999999999999975567 567899999999999987
Q ss_pred CCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCC--CC-c-CccccceeecCCCcchh------
Q 017265 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNG--GL-F-NSKTTGIVGLGGGDISL------ 231 (374)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GilGLg~~~~s~------ 231 (374)
|.|.+.|++|+. +|.+++|+|+|++. +++ +.|||++... +. + ....+||||||++..+.
T Consensus 195 ----~~~~i~YgdGs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~ 263 (453)
T 2bju_A 195 ----TKVEMNYVSGTV-SGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPI 263 (453)
T ss_dssp ----EEEEEECSSSEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCH
T ss_pred ----cEEEEEcCCCCe-EEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcH
Confidence 999999999995 59999999999986 888 9999999876 53 3 46789999999987653
Q ss_pred hHHhhhh-----------------------cCCc---e---------e----------c-CC-----CCCcEEEeccccc
Q 017265 232 ISQMRTT-----------------------IAGN---Q---------R----------L-GV-----STPDIVIDSGTTL 260 (374)
Q Consensus 232 ~~ql~~~-----------------------~~~~---k---------~----------~-~~-----~~~~~iiDSGtt~ 260 (374)
+.+|..+ +|+. + . . .. ....+||||||++
T Consensus 264 ~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl 343 (453)
T 2bju_A 264 VVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSA 343 (453)
T ss_dssp HHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEEEEETTEEEEEEEEEECTTCCS
T ss_pred HHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEEEEECcEEeccccEEEcCCCCe
Confidence 3444332 1111 0 0 0 00 1356899999999
Q ss_pred cccCHhHHHHHHHHHHhhcccCccCCC-CCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CCeEEEE-EE
Q 017265 261 TFLPQGYNSNLLSVMSSMIEAQPVADP-TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FK 336 (374)
Q Consensus 261 ~~lp~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i~ 336 (374)
+++|++++++|++++.+. ....+ .+ ..+|+. . .+|+|+|+|+|++++||+++|+++.. +...|+. |+
T Consensus 344 ~~lP~~~~~~l~~~i~~~----~~~~g~~~-~v~C~~-~---~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~ 414 (453)
T 2bju_A 344 ITVPTDFLNKMLQNLDVI----KVPFLPFY-VTLCNN-S---KLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNII 414 (453)
T ss_dssp EEECHHHHHHHTTTSSCE----ECTTSSCE-EEETTC-T---TCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEE
T ss_pred EecCHHHHHHHHHHhCCc----ccCCCceE-EEecCC-C---CCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEE
Confidence 999999999997666432 22233 33 446986 2 78999999999999999999999875 3468997 88
Q ss_pred cCC--CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 337 GIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 337 ~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 415 ~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 415 GLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp ECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 765 3589999999999999999999999999875
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.2e-47 Score=364.00 Aligned_cols=254 Identities=22% Similarity=0.394 Sum_probs=206.2
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCCCCccccCCCCcccc
Q 017265 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQ-----CEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCA 154 (374)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~-----~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~ 154 (374)
...++...+.+|+++|.||||+|++.|+|||||+++||+ |..|. .|. .++.|||++|+||+..+
T Consensus 3 i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C~--~~~~y~~~~SsT~~~~~------- 71 (339)
T 3fv3_A 3 ISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DCK--SSGTFTPSSSSSYKNLG------- 71 (339)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CTT--TTCCBCGGGCTTCEEEE-------
T ss_pred eeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CCC--CCCcCCCccCcceeeCC-------
Confidence 455677788999999999999999999999999999998 44444 784 67899999999999987
Q ss_pred CCCCCCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcch----
Q 017265 155 SLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDIS---- 230 (374)
Q Consensus 155 ~~~~~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s---- 230 (374)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+||||||++..+
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~ 130 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV-----DQGILGIGYTSNEAVYD 130 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBC
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC-----CceeEEecCcccccccc
Confidence 999999999987779999999999987 899999999998653 6899999998754
Q ss_pred ------------hhHHhhhh-----------------------cCCc---e-------------------e-----c---
Q 017265 231 ------------LISQMRTT-----------------------IAGN---Q-------------------R-----L--- 245 (374)
Q Consensus 231 ------------~~~ql~~~-----------------------~~~~---k-------------------~-----~--- 245 (374)
++.||..+ ||+. + . .
T Consensus 131 ~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~ 210 (339)
T 3fv3_A 131 TSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSS 210 (339)
T ss_dssp TTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCE
T ss_pred ccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEe
Confidence 56666542 1111 0 0 0
Q ss_pred CCCCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEe-CcEEEEcCceeEE
Q 017265 246 GVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFV 324 (374)
Q Consensus 246 ~~~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~-g~~~~l~~~~~~~ 324 (374)
......+||||||++++||++++++|++++.+.........+.+.+ +|+.. .+|+|+|+|+ |++++||+++|++
T Consensus 211 ~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~~~----~~p~i~f~f~~g~~~~v~~~~~~~ 285 (339)
T 3fv3_A 211 FSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFI-DCNTD----TSGTTVFNFGNGAKITVPNTEYVY 285 (339)
T ss_dssp EEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEE-CTTCC----CCSEEEEEETTSCEEEEEGGGGEE
T ss_pred ecCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEE-ecCCC----CCCcEEEEECCCCEEEECHHHhee
Confidence 0112469999999999999999999999988654311111233434 59852 5899999995 7999999999999
Q ss_pred EeCCCeEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 325 KVSEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 325 ~~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
+..+ ..|+. |++ .+.||||++|||++|+|||++++|||||+++|++
T Consensus 286 ~~~~-~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 286 QNGD-GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp ECSS-SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred eCCC-CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 8644 47976 887 3689999999999999999999999999999985
No 19
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.5e-47 Score=372.65 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=204.4
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (374)
.++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|. ...|. .++.|||++|+||+..+
T Consensus 44 ~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------ 109 (478)
T 1qdm_A 44 VALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG------------ 109 (478)
T ss_dssp GGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC------------
T ss_pred EEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC------------
Confidence 3444557899999999999999999999999999999999995 34684 56899999999999886
Q ss_pred CCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcchh------
Q 017265 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL------ 231 (374)
Q Consensus 160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s~------ 231 (374)
+.|.+.|++|+. +|.+++|+|+|++. .++++.|||++...+. | ...++||||||++.++.
T Consensus 110 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~ 177 (478)
T 1qdm_A 110 ------KPAAIQYGTGSI-AGYFSEDSVTVGDL-----VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPV 177 (478)
T ss_dssp ------CEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEcCCCCe-EEEEEEEEEEECCe-----EECCEEEEEEEecCCcccccccccceecccccccccCCCCcH
Confidence 899999999985 59999999999986 8999999999987653 4 56789999999987763
Q ss_pred hHHhhhh-------------------------cCCc---------------------------ee----c--CCCCCcEE
Q 017265 232 ISQMRTT-------------------------IAGN---------------------------QR----L--GVSTPDIV 253 (374)
Q Consensus 232 ~~ql~~~-------------------------~~~~---------------------------k~----~--~~~~~~~i 253 (374)
+.+|..+ ||+. .. . ......+|
T Consensus 178 ~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~ai 257 (478)
T 1qdm_A 178 WYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAI 257 (478)
T ss_dssp HHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEE
T ss_pred HHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEE
Confidence 2222211 1211 00 0 12346799
Q ss_pred EeccccccccCHhHHHHHHHHHHhhc----------------------------------cc---C--------------
Q 017265 254 IDSGTTLTFLPQGYNSNLLSVMSSMI----------------------------------EA---Q-------------- 282 (374)
Q Consensus 254 iDSGtt~~~lp~~~~~~i~~~~~~~~----------------------------------~~---~-------------- 282 (374)
|||||+++++|++++++|.++|.+.. +. .
T Consensus 258 iDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~ 337 (478)
T 1qdm_A 258 ADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVD 337 (478)
T ss_dssp ECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-----------------
T ss_pred EcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccc
Confidence 99999999999999999998885421 00 0
Q ss_pred -------------------------------------------------ccCCCCCCcccccccCCCCCcceEEEEEeCc
Q 017265 283 -------------------------------------------------PVADPTGSLELCYSFNSLSQVPEVTIHFRGA 313 (374)
Q Consensus 283 -------------------------------------------------~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~ 313 (374)
....+.+.+ +|.... .+|+|+|+|+|+
T Consensus 338 ~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v-~C~~~~---~lP~i~f~~gg~ 413 (478)
T 1qdm_A 338 DEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAV-DCGSLG---SMPDIEFTIGGK 413 (478)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEE-CGGGGT---TCCCEEEEETTE
T ss_pred ccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEe-eccccc---ccccEEEEECCE
Confidence 000122333 376543 789999999999
Q ss_pred EEEEcCceeEEEeCC--CeEEEE-EEcCC-----CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 314 DVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 314 ~~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
+|+|+|++|+++..+ ...|++ |+..+ ++.||||+.|||++|+|||++++|||||++.
T Consensus 414 ~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 414 KFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999999998754 358998 87532 4679999999999999999999999999863
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1e-47 Score=364.74 Aligned_cols=254 Identities=21% Similarity=0.374 Sum_probs=207.5
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCCCccccCCCCccccCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP--PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~--~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 158 (374)
.++.++.+.+|+++|.||||+|+++|+|||||+++||+|..|. ...| ..++.|||++|+|++...
T Consensus 10 ~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------- 76 (341)
T 3k1w_A 10 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------- 76 (341)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred ccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC-----------
Confidence 4555678999999999999999999999999999999999997 2357 467899999999999876
Q ss_pred CCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------
Q 017265 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------ 230 (374)
Q Consensus 159 ~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------ 230 (374)
|.|.+.|++|+. .|.+++|+|+|++. .+ ++.|||++...+. + ....+||||||++..+
T Consensus 77 -------~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 77 -------TELTLRYSTGTV-SGFLSQDIITVGGI-----TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp -------EEEEEEETTEEE-EEEEEEEEEEETTE-----EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------CEEEEEECCcEE-EEEEEEEEEEECCc-----ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCC
Confidence 999999999995 59999999999987 88 9999999987763 4 5678999999998765
Q ss_pred hhHHhhhh---------------------------cCCc-------------------------------e-ecCCCCCc
Q 017265 231 LISQMRTT---------------------------IAGN-------------------------------Q-RLGVSTPD 251 (374)
Q Consensus 231 ~~~ql~~~---------------------------~~~~-------------------------------k-~~~~~~~~ 251 (374)
++.+|..+ ||+. + ........
T Consensus 143 ~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 222 (341)
T 3k1w_A 143 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCL 222 (341)
T ss_dssp HHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEECTTCEE
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeecCCCCE
Confidence 34444322 1111 0 01123457
Q ss_pred EEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CC
Q 017265 252 IVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--ED 329 (374)
Q Consensus 252 ~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~ 329 (374)
+||||||+++++|++++++|++++.+.. ...+ +.+ +|.... .+|+|+|+|+|++++|++++|+++.. ++
T Consensus 223 ~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g-~~~-~C~~~~---~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~ 293 (341)
T 3k1w_A 223 ALVDTGASYISGSTSSIEKLMEALGAKK----RLFD-YVV-KCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSK 293 (341)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHHTCEE----CSSC-EEE-EGGGGG---GCCCEEEEETTEEEEECHHHHBCCSCCCTT
T ss_pred EEEECCCChhcCCHHHHHHHHHHcCCee----cCCC-eEE-eCCCCC---cCCcEEEEECCEEEEECHHHheeEccCCCC
Confidence 9999999999999999999998886542 2223 444 598654 78999999999999999999998754 25
Q ss_pred eEEEE-EEcC-----CCCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 330 IVCSV-FKGI-----TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 330 ~~C~~-i~~~-----~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
..|+. |+.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 294 ~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 294 KLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp SEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 79997 8763 24689999999999999999999999999975
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-47 Score=363.97 Aligned_cols=254 Identities=21% Similarity=0.411 Sum_probs=203.1
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCC--CC-------CCCCCCCCCCCCCCCCCCCccccCCCCc
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEP--CP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~--c~-------~~~C~~~~~~~y~p~~SsT~~~~~c~~~ 151 (374)
..++...+.+|+++|.||||+|++.|+|||||+++||++.. |. ...| ..++.|||++|+|++..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 4 PVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred ceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC----
Confidence 45566778999999999999999999999999999998664 53 1356 467899999999999987
Q ss_pred cccCCCCCCCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcc--
Q 017265 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (374)
Q Consensus 152 ~C~~~~~~~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (374)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 3pvk_A 78 --------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTS-----IDQGILGVGYKTNEA 133 (342)
T ss_dssp --------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGCS
T ss_pred --------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccC-----CCccEEEecCccccc
Confidence 999999999997779999999999986 89999999998764 5789999999874
Q ss_pred -----hhhHHhhhh-----------------------cCCc---e-------------------e---------cCCCCC
Q 017265 230 -----SLISQMRTT-----------------------IAGN---Q-------------------R---------LGVSTP 250 (374)
Q Consensus 230 -----s~~~ql~~~-----------------------~~~~---k-------------------~---------~~~~~~ 250 (374)
+++.||..+ ||+. + . ......
T Consensus 134 ~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~ 213 (342)
T 3pvk_A 134 GGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTDNV 213 (342)
T ss_dssp SCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEEE
T ss_pred cccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCCCc
Confidence 466776543 1111 0 0 001125
Q ss_pred cEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEe-CcEEEEcCceeEEEeC--
Q 017265 251 DIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFVKVS-- 327 (374)
Q Consensus 251 ~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~-g~~~~l~~~~~~~~~~-- 327 (374)
.+||||||++++||++++++|++++.+...........+ ..+|+ ..|+|+|+|+ |.+++||+++|+++..
T Consensus 214 ~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~-~~~C~------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~ 286 (342)
T 3pvk_A 214 DVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFY-EVDCN------LSGDVVFNFSKNAKISVPASEFAASLQGD 286 (342)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEE-EECSC------CCSEEEEEESTTCEEEEEGGGGEEC----
T ss_pred eEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEE-EEecC------CCCceEEEECCCCEEEEcHHHheeecccc
Confidence 799999999999999999999988876543221111123 44598 5699999998 7999999999998732
Q ss_pred CC---eEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 328 ED---IVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 328 ~~---~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
++ ..|+. |.+. +.||||++|||++|+|||++++|||||+++|+.
T Consensus 287 ~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 287 DGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp ------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 22 67998 7774 689999999999999999999999999999974
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.3e-47 Score=362.56 Aligned_cols=254 Identities=20% Similarity=0.382 Sum_probs=206.0
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (374)
.++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 54 ~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 118 (375)
T 1miq_A 54 IELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEKDG------------- 118 (375)
T ss_dssp CCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEEEE-------------
T ss_pred EEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEECC-------------
Confidence 34445678899999999999999999999999999999999975567 467899999999999987
Q ss_pred CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeee----CCCCc-CccccceeecCCCcch-----
Q 017265 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS----- 230 (374)
Q Consensus 161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s----- 230 (374)
|.|.+.|++|+. .|.+++|+|+|++. .+++ .|||++. .. .| ....+||||||++.++
T Consensus 119 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~ 185 (375)
T 1miq_A 119 -----TKVDITYGSGTV-KGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSID 185 (375)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCC
T ss_pred -----cEEEEEeCCCeE-EEEEEEEEEEEcCc-----eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCC
Confidence 999999999995 59999999999986 8889 9999998 54 44 5678999999998765
Q ss_pred -hhHHhhhh-----------------------cCCc---e---------e----------c-C-C----CCCcEEEeccc
Q 017265 231 -LISQMRTT-----------------------IAGN---Q---------R----------L-G-V----STPDIVIDSGT 258 (374)
Q Consensus 231 -~~~ql~~~-----------------------~~~~---k---------~----------~-~-~----~~~~~iiDSGt 258 (374)
++.+|..+ ||+. + . . . . ....+||||||
T Consensus 186 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~i~v~g~~~~~~~aiiDSGT 265 (375)
T 1miq_A 186 PIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGT 265 (375)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEEEEETTEEEEEEEEEECTTB
T ss_pred CHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEEEEECCEEcccceEEecCCC
Confidence 33444332 1111 0 0 0 0 0 23569999999
Q ss_pred cccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CCeEEEE-E
Q 017265 259 TLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-F 335 (374)
Q Consensus 259 t~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i 335 (374)
+++++|++++++|++++.+... ...+.+ ..+|+. . .+|+|+|+|+|++++||+++|+++.. +...|+. |
T Consensus 266 s~~~lP~~~~~~l~~~~~~~~~---~~~g~~-~~~C~~-~---~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~ 337 (375)
T 1miq_A 266 TTITAPSEFLNKFFANLNVIKV---PFLPFY-VTTCDN-K---EMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITM 337 (375)
T ss_dssp SSEEECHHHHHHHHHHHTCEEC---TTSSCE-EEETTC-T---TCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESE
T ss_pred ccEEcCHHHHHHHHHHhCCccc---CCCCeE-EEECCC-C---CCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 9999999999999988865321 112334 345996 2 79999999999999999999999875 3458996 8
Q ss_pred EcCC--CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 336 KGIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 336 ~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
++.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 338 ~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 338 LPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 8765 2689999999999999999999999999874
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=6.7e-47 Score=369.43 Aligned_cols=254 Identities=19% Similarity=0.297 Sum_probs=207.3
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (374)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (374)
..++.++.+.+|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+|++..+
T Consensus 128 ~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~------------ 193 (451)
T 3qvc_A 128 NVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD------------ 193 (451)
T ss_dssp CCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE------------
T ss_pred ccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC------------
Confidence 345556778999999999999999999999999999999999965578 567899999999999887
Q ss_pred CCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeee----CCCCc-CccccceeecCCCcch----
Q 017265 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS---- 230 (374)
Q Consensus 160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s---- 230 (374)
+.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||++. ..+ + ....+||||||++..+
T Consensus 194 ------~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~ 259 (451)
T 3qvc_A 194 ------TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSI 259 (451)
T ss_dssp ------EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCC
T ss_pred ------CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCC
Confidence 99999999999 569999999999986 888 99999998 655 5 5678999999997654
Q ss_pred --hhHHhhhh-----------------------cCCc---e---------ecC----------------CCCCcEEEecc
Q 017265 231 --LISQMRTT-----------------------IAGN---Q---------RLG----------------VSTPDIVIDSG 257 (374)
Q Consensus 231 --~~~ql~~~-----------------------~~~~---k---------~~~----------------~~~~~~iiDSG 257 (374)
++.+|..+ +|+. + ... .....+|||||
T Consensus 260 ~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~I~Vgg~~~~~~~aiiDSG 339 (451)
T 3qvc_A 260 DPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSA 339 (451)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEEEEETTEEEEEEEEEECTT
T ss_pred CCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEEEEECCccCCCceEEEeCC
Confidence 45555433 1211 0 000 02346999999
Q ss_pred ccccccCHhHHHHHHHHHHhhcccCccC-CCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CCeEEEE
Q 017265 258 TTLTFLPQGYNSNLLSVMSSMIEAQPVA-DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV 334 (374)
Q Consensus 258 tt~~~lp~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~ 334 (374)
|+++++|++++++|++++.+. ... .+.+.+ +|. .. .+|+|+|+|+|++++||+++|+++.. ++..|+.
T Consensus 340 Tt~i~lP~~~~~~i~~~i~a~----~~~~~g~y~v-~C~-~~---~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~ 410 (451)
T 3qvc_A 340 TSVITVPTEFFNQFVESASVF----KVPFLSLYVT-TCG-NT---KLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCML 410 (451)
T ss_dssp BSSEEECHHHHHHHHTTTTCE----ECTTSSCEEE-ETT-CT---TCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEE
T ss_pred CccccCCHHHHHHHHHHcCCe----ecCCCCeEEe-eCC-cC---cCCcEEEEECCEEEEEcHHHheeecccCCCCeEEE
Confidence 999999999999997776543 222 233434 598 33 78999999999999999999999865 3468997
Q ss_pred -EEcCC--CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 335 -FKGIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 335 -i~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
|++.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 411 ~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 411 NIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 88765 4689999999999999999999999999975
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.7e-47 Score=356.48 Aligned_cols=253 Identities=14% Similarity=0.225 Sum_probs=206.2
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (374)
.++.++.+.+|+++|.|| +|++.|+|||||+++||+|..|....|....++.|||++| ||+..+
T Consensus 9 ~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~------------- 72 (330)
T 1yg9_A 9 KLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG------------- 72 (330)
T ss_dssp SCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE-------------
T ss_pred eeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC-------------
Confidence 344456789999999999 8999999999999999999999755685456789999999 999876
Q ss_pred CCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc-CccccceeecCCCcch-------hh
Q 017265 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------LI 232 (374)
Q Consensus 161 C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------~~ 232 (374)
+.|.+.|++|+. .|.+++|+|+|++. +++++.|||++.....| ....+||||||++..+ ++
T Consensus 73 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 141 (330)
T 1yg9_A 73 -----NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVL 141 (330)
T ss_dssp -----EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHH
T ss_pred -----CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHH
Confidence 899999999998 69999999999986 89999999999874334 4678999999998776 45
Q ss_pred HHhhhh------------------------cCCc---------------------------ee----cCCCCCcEEEecc
Q 017265 233 SQMRTT------------------------IAGN---------------------------QR----LGVSTPDIVIDSG 257 (374)
Q Consensus 233 ~ql~~~------------------------~~~~---------------------------k~----~~~~~~~~iiDSG 257 (374)
++|.++ ||+. +. .......+|||||
T Consensus 142 ~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSG 221 (330)
T 1yg9_A 142 ENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTS 221 (330)
T ss_dssp HHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTT
T ss_pred HHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecC
Confidence 555322 1111 00 0123568999999
Q ss_pred ccccccCHhHHHHHHHHHHhhcccCccCCC--CC-CcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE
Q 017265 258 TTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TG-SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV 334 (374)
Q Consensus 258 tt~~~lp~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~ 334 (374)
|+++++|++++++|++++.... ...+ .+ .+ +|+... .+|+|+|+|+|++++||+++|+++. +..|+.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~----~~~g~~~~~~~-~C~~~~---~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~~ 291 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVV----EKTTTRRICKL-DCSKIP---SLPDVTFVINGRNFNISSQYYIQQN--GNLCYS 291 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEE----EECSSCEEEEE-CGGGGG---GSCCEEEEETTEEEEECHHHHEEEE--TTEEEE
T ss_pred CccccCCHHHHHHHHHHhCCcc----cCCCceEEEEE-ECCCcc---ccCcEEEEECCEEEEECHHHhcccC--CCcEEE
Confidence 9999999999999998885432 1122 33 34 498654 6899999999999999999999987 458997
Q ss_pred -EEcCC-CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 335 -FKGIT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 335 -i~~~~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
|++.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 292 ~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 292 GFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp SEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 87643 5689999999999999999999999999874
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-46 Score=351.92 Aligned_cols=251 Identities=20% Similarity=0.306 Sum_probs=202.4
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCC
Q 017265 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (374)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~ 163 (374)
....+.+|+++|.|| +|++.|+|||||+++||+|..|. .|.++.++.|||++|+ ++...
T Consensus 9 ~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~---------------- 67 (325)
T 1ibq_A 9 PQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP--SSEQTGHDLYTPSSSA-TKLSG---------------- 67 (325)
T ss_dssp ECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC--HHHHTTSCCCBCCSSC-EECTT----------------
T ss_pred EcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC--ccccCCCCCCCchhcC-CccCC----------------
Confidence 345788999999999 89999999999999999999998 6766788999999999 65444
Q ss_pred CcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcch---------hh
Q 017265 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (374)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~ 232 (374)
|.|.+.|++|+.++|.+++|+|+|++. .++++.|||++...+.+ ....+||||||++.++ ++
T Consensus 68 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~ 140 (325)
T 1ibq_A 68 --YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFF 140 (325)
T ss_dssp --CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHH
Confidence 899999999997779999999999986 89999999999876544 2578999999998765 34
Q ss_pred HHhhhhc-------------------CCc-----------------------e-----e----cCCCCCcEEEecccccc
Q 017265 233 SQMRTTI-------------------AGN-----------------------Q-----R----LGVSTPDIVIDSGTTLT 261 (374)
Q Consensus 233 ~ql~~~~-------------------~~~-----------------------k-----~----~~~~~~~~iiDSGtt~~ 261 (374)
+||..++ |+. + . .......+||||||+++
T Consensus 141 ~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 220 (325)
T 1ibq_A 141 DTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLI 220 (325)
T ss_dssp HHHGGGSSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSE
T ss_pred HHHHHhcCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcE
Confidence 5654432 111 0 0 01234679999999999
Q ss_pred ccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC--CCeEEEE-EEcC
Q 017265 262 FLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGI 338 (374)
Q Consensus 262 ~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i~~~ 338 (374)
++|++++++|++++.++... ...+.+.+ +|+. .+|+|+|+|+|++++||+++|+++.. +...|++ |+..
T Consensus 221 ~lP~~~~~~i~~~i~~a~~~--~~~g~~~~-~C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~ 292 (325)
T 1ibq_A 221 LLDDEIVSAYYEQVSGAQES--YEAGGYVF-SCST-----DLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSN 292 (325)
T ss_dssp EECHHHHHHHHTTSTTCBCC--SSSSSCEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEC
T ss_pred eCCHHHHHHHHHhCCCceEc--CcCCeEEE-EcCC-----CCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcC
Confidence 99999999997776433211 11233444 5982 68999999999999999999998763 2369998 8776
Q ss_pred C-CCcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 339 T-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 339 ~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
. .+.||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 293 SGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 4 5689999999999999999999999999864
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.2e-46 Score=351.54 Aligned_cols=250 Identities=16% Similarity=0.262 Sum_probs=201.8
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCC
Q 017265 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (374)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~~ 164 (374)
...+.+|+++|.|| +|++.|+|||||+++||+|..|. .|.++.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP--SSERSGHDYYTPGSSA-QKIDG----------------- 68 (323)
T ss_dssp CGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTCCCBCCCTTC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC--cccccCCCCCCccccC-CccCC-----------------
Confidence 35788999999999 89999999999999999999998 6666788999999999 66444
Q ss_pred cceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcchh---------hH
Q 017265 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDISL---------IS 233 (374)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s~---------~~ 233 (374)
|.|.+.|++|+.++|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++.++. ++
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 142 (323)
T 1izd_A 69 -ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFD 142 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHH
Confidence 899999999997679999999999986 89999999999876644 35789999999986653 34
Q ss_pred Hhhhhc-------------------CCc---e---------e----------------c---CCCCCcEEEecccccccc
Q 017265 234 QMRTTI-------------------AGN---Q---------R----------------L---GVSTPDIVIDSGTTLTFL 263 (374)
Q Consensus 234 ql~~~~-------------------~~~---k---------~----------------~---~~~~~~~iiDSGtt~~~l 263 (374)
+|..++ |+. + . . ......+||||||+++++
T Consensus 143 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~l 222 (323)
T 1izd_A 143 NVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLL 222 (323)
T ss_dssp HHGGGSSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEE
T ss_pred HHHHhccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCcceeC
Confidence 444332 111 0 0 0 013457999999999999
Q ss_pred CHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCCCeEEEE-EEcCC-CC
Q 017265 264 PQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-NS 341 (374)
Q Consensus 264 p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~-~~ 341 (374)
|++++++|++++.++... ...+.+.+ +|+. .+|+|+|+|+|++++||+++|+++..++..|++ |++.+ .+
T Consensus 223 p~~~~~~i~~~i~ga~~~--~~~g~~~~-~C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~~~~~~ 294 (323)
T 1izd_A 223 DDSIVDAYYEQVNGASYD--SSQGGYVF-PSSA-----SLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIG 294 (323)
T ss_dssp CHHHHHHHHTTSTTCEEE--TTTTEEEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEECTTTS
T ss_pred CHHHHHHHHHhCCCcEEc--CcCCEEEE-ECCC-----CCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEcCCCCC
Confidence 999999997776432211 11233444 4982 689999999999999999999988755678998 88764 56
Q ss_pred cceechhhhcceEEEEECCCCEEEEecCC
Q 017265 342 VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 342 ~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
.||||++|||++|+|||++++|||||+++
T Consensus 295 ~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 295 FSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp SEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 89999999999999999999999999864
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.4e-46 Score=352.56 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=201.4
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCC
Q 017265 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (374)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~ 163 (374)
....+.+|+++|.|| +|++.|+|||||+++||+|..|. .|.++.++.|||++|+ ++...
T Consensus 10 ~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~---------------- 68 (323)
T 1bxo_A 10 PTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP--ASQQSGHSVYNPSATG-KELSG---------------- 68 (323)
T ss_dssp ECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCHHHHC-EEEEE----------------
T ss_pred ecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC--chhccCCCCCCcccCC-cccCC----------------
Confidence 345788999999999 99999999999999999999998 6766788999999999 66544
Q ss_pred CcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCc--CccccceeecCCCcch---------hh
Q 017265 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (374)
Q Consensus 164 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------~~ 232 (374)
|.|.+.|++|+.++|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++..+ ++
T Consensus 69 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 141 (323)
T 1bxo_A 69 --YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFF 141 (323)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHH
Confidence 899999999997779999999999986 89999999999876544 2578999999997655 34
Q ss_pred HHhhhhcC-------------------Cc---e---------ec------------------CCCCCcEEEecccccccc
Q 017265 233 SQMRTTIA-------------------GN---Q---------RL------------------GVSTPDIVIDSGTTLTFL 263 (374)
Q Consensus 233 ~ql~~~~~-------------------~~---k---------~~------------------~~~~~~~iiDSGtt~~~l 263 (374)
++|..++. +. + .. ......+||||||+++++
T Consensus 142 ~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~l 221 (323)
T 1bxo_A 142 DTVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLL 221 (323)
T ss_dssp HHHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEE
T ss_pred HHHHHhcCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeC
Confidence 45543321 11 0 00 011346899999999999
Q ss_pred CHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC-CeEEEE-EEcCC-C
Q 017265 264 PQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE-DIVCSV-FKGIT-N 340 (374)
Q Consensus 264 p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~-~~~C~~-i~~~~-~ 340 (374)
|++++++|++++.++... ...+.+.+ +|+. .+|+|+|+|+|++++||+++|+++..+ ...|++ |+..+ .
T Consensus 222 P~~~~~~l~~~i~~a~~~--~~~g~~~~-~C~~-----~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~~ 293 (323)
T 1bxo_A 222 DDSVVSQYYSQVSGAQQD--SNAGGYVF-DCST-----NLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGI 293 (323)
T ss_dssp CHHHHHHHHTTSTTCEEE--TTTTEEEE-CTTC-----CCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEECTTC
T ss_pred CHHHHHHHHHhCCCceEc--CcCCEEEE-ECCC-----CCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEECCCCC
Confidence 999999997776433211 11233434 4982 689999999999999999999987643 468999 88764 5
Q ss_pred CcceechhhhcceEEEEECCCCEEEEecCC
Q 017265 341 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 370 (374)
Q Consensus 341 ~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 370 (374)
+.||||++|||++|+|||++++|||||+++
T Consensus 294 ~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 294 GFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 689999999999999999999999999864
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1e-44 Score=356.61 Aligned_cols=258 Identities=21% Similarity=0.378 Sum_probs=199.3
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCCc
Q 017265 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (374)
Q Consensus 86 ~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~~~ 165 (374)
..+.+|+++|.||||+|+++|+|||||+++||+|.+| | ..++.|||++|+||+..+
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c--~~~~~y~~~~SsT~~~~~------------------ 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR------------------ 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----c--ccCCcccCCCCCCcccCC------------------
Confidence 3566899999999999999999999999999999987 3 467899999999999987
Q ss_pred ceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCC-ceEEeeeeeCCCCc--CccccceeecCCCcch--------hhHH
Q 017265 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQ 234 (374)
Q Consensus 166 ~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------~~~q 234 (374)
|.|.+.|++|+. .|.+++|+|+|++.. .+. .+.|+++......| ....+||||||++.++ ++.+
T Consensus 127 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 201 (455)
T 3lpj_A 127 KGVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 201 (455)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ccEEEEeCCeEE-EEEEEEEEEEECCCc----ceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHH
Confidence 999999999998 599999999998521 222 35688887766544 3678999999997664 2233
Q ss_pred hhhh--------------------------------cCCc-------------------------------eecCC----
Q 017265 235 MRTT--------------------------------IAGN-------------------------------QRLGV---- 247 (374)
Q Consensus 235 l~~~--------------------------------~~~~-------------------------------k~~~~---- 247 (374)
|..+ ||+. +....
T Consensus 202 L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~ 281 (455)
T 3lpj_A 202 LVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKE 281 (455)
T ss_dssp HHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGG
T ss_pred HHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccc
Confidence 3211 1111 00000
Q ss_pred -CCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCC--CCCcccccccCCC--CCcceEEEEEeCc------EEE
Q 017265 248 -STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TGSLELCYSFNSL--SQVPEVTIHFRGA------DVK 316 (374)
Q Consensus 248 -~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~ 316 (374)
....+||||||++++||++++++|+++|.+.......... .....+|+..... ..+|+|+|+|+|. +|+
T Consensus 282 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~ 361 (455)
T 3lpj_A 282 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRIT 361 (455)
T ss_dssp GGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEE
T ss_pred cCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEE
Confidence 2457999999999999999999999999987542221111 1123469976421 2489999999986 499
Q ss_pred EcCceeEEEeCCC----eEEEE--EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 317 LSRSNFFVKVSED----IVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 317 l~~~~~~~~~~~~----~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
|++++|+++..+. ..|++ +... .+.||||++|||++|+|||++++|||||+++|+.
T Consensus 362 l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 362 ILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp ECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred ECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 9999999987542 58997 3332 5789999999999999999999999999999975
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=344.22 Aligned_cols=259 Identities=24% Similarity=0.377 Sum_probs=197.8
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCC
Q 017265 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (374)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~~ 164 (374)
...+.+|+++|.||||+|++.|+|||||+++||+|.+|. .| ++.|||++|+||+..+
T Consensus 9 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~~----~~~f~~~~SsT~~~~~----------------- 65 (383)
T 2ewy_A 9 GDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--YI----DTYFDTERSSTYRSKG----------------- 65 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--TB----SCCCCGGGCTTCEEEE-----------------
T ss_pred CCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--cc----ccCcccccCccceeCC-----------------
Confidence 345678999999999999999999999999999999887 55 4789999999999987
Q ss_pred cceeeEeeCCCceeeeeEEEEEEEecCCCCCcccC-CceEEeeeeeCCCCc--CccccceeecCCCcch-----------
Q 017265 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVAL-PGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS----------- 230 (374)
Q Consensus 165 ~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~-~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s----------- 230 (374)
|.|.+.|++|+. +|.+++|+|+|++.. .. ..+.|++.....+.| ....+||||||++.++
T Consensus 66 -~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~ 139 (383)
T 2ewy_A 66 -FDVTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFD 139 (383)
T ss_dssp -EEEEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred -ceEEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHH
Confidence 899999999997 499999999998631 11 135688876655444 3568999999998763
Q ss_pred -hhHHhhh--h-----------------------cCCc-------------------------------eecC--C---C
Q 017265 231 -LISQMRT--T-----------------------IAGN-------------------------------QRLG--V---S 248 (374)
Q Consensus 231 -~~~ql~~--~-----------------------~~~~-------------------------------k~~~--~---~ 248 (374)
+.+|..- . ||+. +... . .
T Consensus 140 ~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~ 219 (383)
T 2ewy_A 140 SLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYN 219 (383)
T ss_dssp HHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTT
T ss_pred HHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccC
Confidence 3333110 0 1111 0000 0 1
Q ss_pred CCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCC--CCCcccccccCCC--CCcceEEEEEeCc------EEEEc
Q 017265 249 TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TGSLELCYSFNSL--SQVPEVTIHFRGA------DVKLS 318 (374)
Q Consensus 249 ~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~l~ 318 (374)
...+||||||++++||+++|++|+++|.+.........+ .....+|+..... ..+|+|+|+|+|. +++|+
T Consensus 220 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 299 (383)
T 2ewy_A 220 ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITIL 299 (383)
T ss_dssp SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEC
Confidence 358999999999999999999999999886543211111 0123469865321 2589999999984 79999
Q ss_pred CceeEEEeC---CCeEEEE--EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 319 RSNFFVKVS---EDIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 319 ~~~~~~~~~---~~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
+++|+++.. ++..|++ +.+. .+.||||++|||++|+|||++++|||||+++|+.
T Consensus 300 ~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 300 PQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp HHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred hHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 999999864 3568985 4544 5689999999999999999999999999999963
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.2e-43 Score=342.19 Aligned_cols=257 Identities=21% Similarity=0.393 Sum_probs=198.1
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCCcc
Q 017265 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (374)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~~~~ 166 (374)
.+.+|+++|.||||+|+++|+|||||+++||+|.+|. ..++.|+|++|+||+... |
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~------~~~~~y~~~~SsT~~~~~------------------~ 81 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP------FLHRYYQRQLSSTYRDLR------------------K 81 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT------TCSCCCCGGGCTTCEEEE------------------E
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCC------cccCCcCcccCcccccCC------------------C
Confidence 3568999999999999999999999999999999873 457899999999999987 9
Q ss_pred eeeEeeCCCceeeeeEEEEEEEecCCCCCcccCC-ceEEeeeeeCCCCc--CccccceeecCCCcch--------hhHHh
Q 017265 167 QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQM 235 (374)
Q Consensus 167 ~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------~~~ql 235 (374)
.|.+.|++|+. .|.+++|+|+|++.. .+. .+.|+++....+.+ ....+||||||++.++ ++.+|
T Consensus 82 ~~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 99999999997 599999999998521 333 24478777665544 3578999999997654 23333
Q ss_pred hhh--------------------------------cCCc-------------------------------eecCC-----
Q 017265 236 RTT--------------------------------IAGN-------------------------------QRLGV----- 247 (374)
Q Consensus 236 ~~~--------------------------------~~~~-------------------------------k~~~~----- 247 (374)
..+ ||+. +....
T Consensus 157 ~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~ 236 (402)
T 3vf3_A 157 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEY 236 (402)
T ss_dssp HHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGG
T ss_pred HHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEeccccccc
Confidence 221 1111 00000
Q ss_pred CCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCC--CCcccccccCCC--CCcceEEEEEeCc------EEEE
Q 017265 248 STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPT--GSLELCYSFNSL--SQVPEVTIHFRGA------DVKL 317 (374)
Q Consensus 248 ~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~i~f~f~g~------~~~l 317 (374)
....+||||||++++||++++++|++++.+........... ....+|+..... ..+|+|+|+|+|. +++|
T Consensus 237 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 316 (402)
T 3vf3_A 237 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 316 (402)
T ss_dssp GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEE
Confidence 24579999999999999999999999999875422221211 123469976321 2589999999985 4999
Q ss_pred cCceeEEEeCCC----eEEEE--EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 318 SRSNFFVKVSED----IVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 318 ~~~~~~~~~~~~----~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
++++|+++..+. ..|++ +... .+.||||++|||++|+|||++++|||||+++|++
T Consensus 317 ~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 317 LPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp CHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred CHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 999999987542 58996 4333 5789999999999999999999999999999985
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.5e-43 Score=339.92 Aligned_cols=257 Identities=21% Similarity=0.395 Sum_probs=196.9
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCCCCCc
Q 017265 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (374)
Q Consensus 86 ~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C~~~~ 165 (374)
..+.+|+++|.||||+|++.|+|||||+++||+|..|. .| ++.|||++|+||+...
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~--~~----~~~y~~~~SsT~~~~~------------------ 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP--FL----HRYYQRQLSSTYRDLR------------------ 73 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT--TC----SCCCCGGGCTTCEEEE------------------
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc--cc----cCCcCcccCCCceeCC------------------
Confidence 34678999999999999999999999999999999886 44 5789999999999987
Q ss_pred ceeeEeeCCCceeeeeEEEEEEEecC-CCCCcccCC-ceEEeeeeeCCCCc--CccccceeecCCCcchh--------hH
Q 017265 166 CQYSVSYGDGSFSNGNLATETVTLGS-TTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDISL--------IS 233 (374)
Q Consensus 166 ~~~~~~Y~~gs~~~G~~~~D~v~i~~-~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s~--------~~ 233 (374)
|.|.+.|++|+. +|.+++|+|+|++ . .+. .+.|++.....+.| ....+||||||++.++. +.
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 899999999998 5999999999984 3 332 35678777655444 35789999999977532 22
Q ss_pred Hhhhh--------------------------------cCCc-------------------------------eecC--C-
Q 017265 234 QMRTT--------------------------------IAGN-------------------------------QRLG--V- 247 (374)
Q Consensus 234 ql~~~--------------------------------~~~~-------------------------------k~~~--~- 247 (374)
+|..+ ||+. +... .
T Consensus 148 ~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~ 227 (395)
T 2qp8_A 148 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCK 227 (395)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGG
T ss_pred HHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCcc
Confidence 32111 1111 0000 0
Q ss_pred --CCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCC--CCCcccccccCCC--CCcceEEEEEeCc------EE
Q 017265 248 --STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TGSLELCYSFNSL--SQVPEVTIHFRGA------DV 315 (374)
Q Consensus 248 --~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~--~~~P~i~f~f~g~------~~ 315 (374)
....+||||||++++||+++|++|+++|.+.......... .....+|+..... ..+|+|+|+|+|. +|
T Consensus 228 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 228 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp GGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 1357999999999999999999999999887543211111 1113459875321 2589999999985 69
Q ss_pred EEcCceeEEEeCC----CeEEEE--EEcCCCCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 316 KLSRSNFFVKVSE----DIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 316 ~l~~~~~~~~~~~----~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
+|+|++|+++..+ ...|++ +.+. .+.||||++|||++|+|||++++|||||+++|++
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 9999999998643 358974 6554 5689999999999999999999999999999985
No 32
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.8e-43 Score=337.95 Aligned_cols=265 Identities=21% Similarity=0.458 Sum_probs=196.0
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCC---CCCC
Q 017265 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLN---QKSC 161 (374)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~---~~~C 161 (374)
++.+.+|+++|.|||| |+|||||+++||+|.+|. +|+.+.|.++.|.... ...|
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~------------------~~~~~~C~s~~C~~~~~~~~~sc 66 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ------------------PPAEIPCSSPTCLLANAYPAPGC 66 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC------------------CCCCCBTTSHHHHHHHSSCCTTC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC------------------CCCccCCCCchhccccCCCCCCC
Confidence 4678899999999998 999999999999987542 2445566666664321 1234
Q ss_pred CC---------Ccc-eeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCce----EEeeeeeCCC-CcCccccceeecCC
Q 017265 162 SG---------VNC-QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGI----TFGCGTNNGG-LFNSKTTGIVGLGG 226 (374)
Q Consensus 162 ~~---------~~~-~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~----~fg~~~~~~~-~~~~~~~GilGLg~ 226 (374)
.. ..| .|.+.|++|+.++|.+++|+|+|++.++. +.++++ .|||++.... .+....|||||||+
T Consensus 67 ~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~ 145 (381)
T 1t6e_X 67 PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLAN 145 (381)
T ss_dssp CCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSS
T ss_pred CCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccCCCCCCCceEEEeCC
Confidence 31 135 59999999998779999999999863221 245554 6799987521 12367899999999
Q ss_pred CcchhhHHhhhh--------------------cCCc-----------------e-------------------ecC-C-C
Q 017265 227 GDISLISQMRTT--------------------IAGN-----------------Q-------------------RLG-V-S 248 (374)
Q Consensus 227 ~~~s~~~ql~~~--------------------~~~~-----------------k-------------------~~~-~-~ 248 (374)
+.++++.||..+ ||+. + ... . .
T Consensus 146 ~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 146 SGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred CcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 999999988642 1110 0 000 0 1
Q ss_pred ---CCcEEEeccccccccCHhHHHHHHHHHHhhccc--------CccCCCCCCcccccccCCC------CCcceEEEEEe
Q 017265 249 ---TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEA--------QPVADPTGSLELCYSFNSL------SQVPEVTIHFR 311 (374)
Q Consensus 249 ---~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~--------~~~~~~~~~~~~C~~~~~~------~~~P~i~f~f~ 311 (374)
.+++||||||++++||+++|++|.++|.+++.. .+.......+.+|+..... ..+|+|+|+|+
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~ 305 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLD 305 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEET
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEEC
Confidence 356999999999999999999999999887641 1110122234579976421 26899999998
Q ss_pred C-cEEEEcCceeEEEeCCCeEEEEEEcCCC--------CcceechhhhcceEEEEECCCCEEEEecC----CCCC
Q 017265 312 G-ADVKLSRSNFFVKVSEDIVCSVFKGITN--------SVPIYGNIMQTNFLVGYDIEQQTVSFKPT----DCTK 373 (374)
Q Consensus 312 g-~~~~l~~~~~~~~~~~~~~C~~i~~~~~--------~~~ilG~~fl~~~y~vfD~~~~riGfa~~----~C~~ 373 (374)
| ++|+|++++|+++..++..|++|+.... +.||||+.|||++|+|||++++|||||++ .|++
T Consensus 306 gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~~~~cs~ 380 (381)
T 1t6e_X 306 GGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGG 380 (381)
T ss_dssp TSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC
T ss_pred CCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccCCCCCCC
Confidence 5 9999999999998766779999776532 57999999999999999999999999974 4665
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.4e-43 Score=333.42 Aligned_cols=245 Identities=22% Similarity=0.362 Sum_probs=189.3
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~C 161 (374)
.++.+.+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------~~y~~s~Ss~~~~---------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------KSYVKTSTSSATS---------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------SCCCCCTTCEEEE----------------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------CccCCcCCccccC----------------
Confidence 344445779999999999999999999999999999652 4789988876543
Q ss_pred CCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCCCcCccccceeecCCCcchh----------
Q 017265 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISL---------- 231 (374)
Q Consensus 162 ~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s~---------- 231 (374)
|.|.+.|++|+. +|.+++|+|+|++. +++++.|||++...+ + ...+||||||++..++
T Consensus 57 ----~~~~i~Yg~Gs~-~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~-~-~~~~GilGLg~~~~s~~~~~~~~~~~ 124 (340)
T 1wkr_A 57 ----DKVSVTYGSGSF-SGTEYTDTVTLGSL-----TIPKQSIGVASRDSG-F-DGVDGILGVGPVDLTVGTLSPHTSTS 124 (340)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEES-C-TTCSEEEECSCGGGGTTSEESCTTCC
T ss_pred ----ceEEEEECCcEE-EEEEEEEEEEECCE-----EEcceEEEEEEccCC-C-cCCCcEEECCcccccccccccccccc
Confidence 899999999985 59999999999986 899999999998655 4 4689999999987654
Q ss_pred ----hHHhhhh--------------------------cCCc---------------e----e----------cCC-----
Q 017265 232 ----ISQMRTT--------------------------IAGN---------------Q----R----------LGV----- 247 (374)
Q Consensus 232 ----~~ql~~~--------------------------~~~~---------------k----~----------~~~----- 247 (374)
+.+|..+ ||+. + . ...
T Consensus 125 ~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~~~i~v~~~~~l~ 204 (340)
T 1wkr_A 125 IPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSSTSIL 204 (340)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEETTTEEEE
T ss_pred CCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEEeeEEECCCeEcc
Confidence 3333211 1111 0 0 000
Q ss_pred CCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeC
Q 017265 248 STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS 327 (374)
Q Consensus 248 ~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~ 327 (374)
....+||||||++++||++++++|.+++.+.... ..+.+.+ +|.... .+|+|+|+|+|++++|++++|+++..
T Consensus 205 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~---~~g~~~~-~C~~~~---~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 205 SSTAGIVDTGTTLTLIASDAFAKYKKATGAVADN---NTGLLRL-TTAQYA---NLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp EEEEEEECTTBCSEEECHHHHHHHHHHHTCEECT---TTSSEEE-CHHHHH---TCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC---CCCeEEe-eccccc---cCCcEEEEECCEEEEEcHHHhccccc
Confidence 1136899999999999999999997777543221 1223334 597543 68999999999999999999998753
Q ss_pred -------CCeEEEE-EEcCC-----CCcceechhhhcceEEEEECCCCEEEEecCCCCC
Q 017265 328 -------EDIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 373 (374)
Q Consensus 328 -------~~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~~ 373 (374)
+...|+. |.... +..||||++|||++|+|||++++|||||+++|+.
T Consensus 278 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp GGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred cccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 1246865 76522 2469999999999999999999999999999975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.97 E-value=1.5e-31 Score=240.69 Aligned_cols=170 Identities=26% Similarity=0.413 Sum_probs=136.6
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (374)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (374)
.++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|. ...|. .++.|||++|+||+..+
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------ 70 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG------------ 70 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC------------
Confidence 3445678899999999999999999999999999999999996 23574 56899999999999887
Q ss_pred CCCCCcceeeEeeCCCceeeeeEEEEEEEecCCCCCcccCCceEEeeeeeCCC-Cc-CccccceeecCCCcch--hhHHh
Q 017265 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS--LISQM 235 (374)
Q Consensus 160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s--~~~ql 235 (374)
+.|.+.|++|+. +|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++.++ +..+|
T Consensus 71 ------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l 138 (239)
T 1b5f_A 71 ------TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNM 138 (239)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHH
T ss_pred ------cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHH
Confidence 899999999985 59999999999986 899999999988654 23 4678999999998876 22222
Q ss_pred hhh-------------------------cCCc-------------------------------eec--CCCCCcEEEecc
Q 017265 236 RTT-------------------------IAGN-------------------------------QRL--GVSTPDIVIDSG 257 (374)
Q Consensus 236 ~~~-------------------------~~~~-------------------------------k~~--~~~~~~~iiDSG 257 (374)
.++ ||+. +.. ......+|||||
T Consensus 139 ~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTG 218 (239)
T 1b5f_A 139 LNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSG 218 (239)
T ss_dssp HHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTT
T ss_pred HHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecC
Confidence 211 1111 000 123457999999
Q ss_pred ccccccCHhHHHHHHHHHH
Q 017265 258 TTLTFLPQGYNSNLLSVMS 276 (374)
Q Consensus 258 tt~~~lp~~~~~~i~~~~~ 276 (374)
|+++++|++++++|.++|.
T Consensus 219 Tt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 219 TSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CSSEEECHHHHHHHHHHTT
T ss_pred cchhhCCHHHHHHHHHHhC
Confidence 9999999999999987764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.94 E-value=1.1e-26 Score=209.35 Aligned_cols=166 Identities=22% Similarity=0.423 Sum_probs=127.8
Q ss_pred ccCCceEEeeeeeCCCC-c-CccccceeecCCCcch------hhHHhhhh-------------------------cCCc-
Q 017265 197 VALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQMRTT-------------------------IAGN- 242 (374)
Q Consensus 197 ~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------~~~ql~~~-------------------------~~~~- 242 (374)
+++++|.|||++...+. | ....+||||||++.++ ++.+|.++ +|+.
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 47889999999998763 4 5689999999998765 33444322 1111
Q ss_pred --------------------------eec-----CCCCCcEEEeccccccccCHhHHHHHHHHHHhhcccCccCCCCCCc
Q 017265 243 --------------------------QRL-----GVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSL 291 (374)
Q Consensus 243 --------------------------k~~-----~~~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~ 291 (374)
+.. ......+||||||+++++|++++++|++++.+.. ...+.+.+
T Consensus 83 ~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~~g~~~~ 158 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP----LIQGEYMI 158 (241)
T ss_dssp GGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----EETTEEEE
T ss_pred HHHcCCceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCee----ccCCcEEE
Confidence 000 1234579999999999999999999988885432 11333444
Q ss_pred ccccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC--CeEEEE-EEcCC-----CCcceechhhhcceEEEEECCCCE
Q 017265 292 ELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQT 363 (374)
Q Consensus 292 ~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~r 363 (374)
+|+... .+|+|+|+|+|++++||+++|+++..+ +..|+. |++.+ .+.||||++|||++|+|||++++|
T Consensus 159 -~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~ 234 (241)
T 1lya_B 159 -PCEKVS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNR 234 (241)
T ss_dssp -EGGGGG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTE
T ss_pred -ECCCCc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCCCE
Confidence 598654 789999999999999999999998753 468997 88642 468999999999999999999999
Q ss_pred EEEecCC
Q 017265 364 VSFKPTD 370 (374)
Q Consensus 364 iGfa~~~ 370 (374)
||||+++
T Consensus 235 igfA~~~ 241 (241)
T 1lya_B 235 VGFAEAA 241 (241)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=2.9e-24 Score=164.70 Aligned_cols=89 Identities=31% Similarity=0.502 Sum_probs=79.7
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCCccccCCCCccccCCCCC
Q 017265 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (374)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~~--~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (374)
++.++.+.+|+++|.||||+|++.|+|||||+++||+|..|.. ..|. .++.|||++|+||+...
T Consensus 6 ~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~------------ 71 (97)
T 1lya_A 6 VLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG------------ 71 (97)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE------------
T ss_pred eeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC------------
Confidence 3445788999999999999999999999999999999999962 3574 57899999999999987
Q ss_pred CCCCCcceeeEeeCCCceeeeeEEEEEEEecC
Q 017265 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGS 191 (374)
Q Consensus 160 ~C~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~ 191 (374)
|.|.+.|++|+. .|.+++|+|+|++
T Consensus 72 ------~~~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------TSFDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEEESC
T ss_pred ------CcEEEEECCcEE-EEEEEEEEEEECC
Confidence 999999999995 5999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.76 E-value=1.4e-18 Score=130.70 Aligned_cols=75 Identities=19% Similarity=0.442 Sum_probs=65.2
Q ss_pred cccccCCCCCcceEEEEEeCcEEEEcCceeEEEeCC--CeEEEE-EEcCC----CCcceechhhhcceEEEEECCCCEEE
Q 017265 293 LCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT----NSVPIYGNIMQTNFLVGYDIEQQTVS 365 (374)
Q Consensus 293 ~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~----~~~~ilG~~fl~~~y~vfD~~~~riG 365 (374)
+|.... ++|+|+|+|+|++++|++++|+++... ...|++ |+..+ .+.||||++|||++|+|||++++|||
T Consensus 6 ~C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riG 82 (87)
T 1b5f_B 6 DCNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVG 82 (87)
T ss_dssp CGGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEE
T ss_pred ECCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEE
Confidence 498654 789999999999999999999998653 368998 88642 45799999999999999999999999
Q ss_pred EecCC
Q 017265 366 FKPTD 370 (374)
Q Consensus 366 fa~~~ 370 (374)
||+++
T Consensus 83 fA~~~ 87 (87)
T 1b5f_B 83 FAEAA 87 (87)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.14 E-value=0.12 Score=41.49 Aligned_cols=94 Identities=10% Similarity=0.135 Sum_probs=53.4
Q ss_pred CCcEEEeccccccccCHhHHHHHHHHHHhhcc-cCccC---CCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEE
Q 017265 249 TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIE-AQPVA---DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFV 324 (374)
Q Consensus 249 ~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~-~~~~~---~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~ 324 (374)
...++||||.+.+.++.+..+.+ .-... ..... .+..... +. .......+.+++..+.+ ++.
T Consensus 37 ~~~~LvDTGAs~s~is~~~a~~l----gl~~~~~~~~~~~a~g~g~~~-~~-----~~~~~~~i~ig~~~~~~---~~~- 102 (148)
T 2i1a_A 37 PVKAFVDTGAQTTIMSTRLAKKT----GLSRMIDKRFIGEARGVGTGK-II-----GRIHQAQVKIETQYIPC---SFT- 102 (148)
T ss_dssp EEEEEECTTCSSCEEEHHHHHHH----TGGGGCBCCCC------------C-----EEEEEEEEEETTEEEEE---EEE-
T ss_pred EEEEEEECCCCccccCHHHHHHc----CCCccCCcceEEEEecCCCcc-cc-----cEEEEEEEEECCEEece---eEE-
Confidence 45799999999999998887665 21100 00000 0000000 10 01223355555544321 111
Q ss_pred EeCCCeEEEEEEcCCCCcceechhhhcceEEEEECCCCEEEEe
Q 017265 325 KVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFK 367 (374)
Q Consensus 325 ~~~~~~~C~~i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa 367 (374)
+.+. +-..|||..||+.+-...|+.+++|-|.
T Consensus 103 ----------vl~~-~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 103 ----------VLDT-DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp ----------EECS-SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred ----------EecC-CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 2221 2458999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.49 E-value=0.14 Score=41.38 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=56.5
Q ss_pred CCCcEEEeccccccccCHhHHHHHHHHHHhhcccC--ccCCCCCCcccccccCCCCCcceEEEEEeCcEEEEcCceeEEE
Q 017265 248 STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQ--PVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVK 325 (374)
Q Consensus 248 ~~~~~iiDSGtt~~~lp~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~ 325 (374)
....+++|||.+.+.++.+..+++- +....... ....+..... +. ...+...+++++..+
T Consensus 34 ~~v~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~~~-~~-----g~v~~~~I~Ig~~~~---------- 95 (148)
T 3s8i_A 34 HPLKAFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGTQR-II-----GRVHLAQIQIEGDFL---------- 95 (148)
T ss_dssp EEEEEEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC---CE-EE-----EEEEEEEEEETTEEE----------
T ss_pred EEEEEEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCccE-EE-----EEEEEEEEEECCEEE----------
Confidence 3557999999999999999887760 00000000 0000000000 10 012333444444321
Q ss_pred eCCCeEEEE-EEcCCCCcceechhhhcceEEEEECCCCEEEEecC
Q 017265 326 VSEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 369 (374)
Q Consensus 326 ~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 369 (374)
.|-+ +.+...-..|||..||+.+-.+.|++++++-|...
T Consensus 96 -----~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 96 -----QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp -----EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred -----EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 2333 33332446899999999999999999999988653
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=88.41 E-value=0.58 Score=34.79 Aligned_cols=29 Identities=31% Similarity=0.327 Sum_probs=24.7
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEecCCC
Q 017265 92 LIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (374)
Q Consensus 92 ~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c 122 (374)
++.+.|| +|.+.+++|||.+++-+.....
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 5779999 8999999999999999965433
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=88.19 E-value=0.49 Score=35.58 Aligned_cols=28 Identities=21% Similarity=0.088 Sum_probs=24.4
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeEec
Q 017265 90 NYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (374)
Q Consensus 90 ~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~ 119 (374)
.-++.|.|| +|.+.+++|||.+++-+..
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 346789999 8999999999999999963
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=85.99 E-value=0.95 Score=33.58 Aligned_cols=28 Identities=18% Similarity=0.069 Sum_probs=24.3
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEecCC
Q 017265 92 LIRISIGTPPTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 92 ~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
++.+.|| +|.+.+++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 6779999 899999999999999995443
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.28 E-value=0.84 Score=36.43 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=27.0
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEec
Q 017265 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (374)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~ 119 (374)
....+++++.|+ ++++++++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456799999998 8999999999999998854
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=83.56 E-value=1.1 Score=34.01 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.4
Q ss_pred EEEEEec---CCCceEEEEEEcCCCceeEecCCCC
Q 017265 92 LIRISIG---TPPTERLAVADTGSDLIWTQCEPCP 123 (374)
Q Consensus 92 ~~~i~iG---tP~q~~~l~~DTGS~~~Wv~~~~c~ 123 (374)
.+.|.|| +|+|.+..++|||-+++-+....+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556666 8899999999999999999876554
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=81.62 E-value=1.3 Score=33.81 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=23.6
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeEecC
Q 017265 90 NYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (374)
Q Consensus 90 ~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~ 120 (374)
.=++ |.|| +|.+.+++|||.+++-+...
T Consensus 14 rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 14 PEIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp CEEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CCEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 3345 9999 89999999999999998654
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=78.82 E-value=1.7 Score=34.76 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=27.2
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeEecC
Q 017265 88 NANYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (374)
Q Consensus 88 ~~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~ 120 (374)
...|++++.|. +++++++||||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45689999998 89999999999999998654
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=78.09 E-value=2.1 Score=32.49 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=26.0
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEecCCCC
Q 017265 91 YLIRISIGTPPTERLAVADTGSDLIWTQCEPCP 123 (374)
Q Consensus 91 Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~~~c~ 123 (374)
=.+.+.|| +|.+.+++|||-+++-+...+.+
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGSC
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccCC
Confidence 36779999 89999999999999999765443
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=70.19 E-value=5.4 Score=31.19 Aligned_cols=29 Identities=17% Similarity=0.143 Sum_probs=25.0
Q ss_pred ccEEEEEEecCCCceEEEEEEcCCCceeEec
Q 017265 89 ANYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (374)
Q Consensus 89 ~~Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~ 119 (374)
..-++.+.|+ +|.+.+++|||.+++-+..
T Consensus 21 ~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 21 PEPRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CSSEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCCEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 3567789999 8999999999999999854
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=65.49 E-value=5.4 Score=33.59 Aligned_cols=27 Identities=33% Similarity=0.337 Sum_probs=24.0
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEec
Q 017265 91 YLIRISIGTPPTERLAVADTGSDLIWTQC 119 (374)
Q Consensus 91 Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~ 119 (374)
-.+.|.|| +|.+.+++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 47889999 8999999999999999853
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=64.77 E-value=6.7 Score=30.24 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=20.1
Q ss_pred ecCCCceEEEEEEcCCCceeEecCCC
Q 017265 97 IGTPPTERLAVADTGSDLIWTQCEPC 122 (374)
Q Consensus 97 iGtP~q~~~l~~DTGS~~~Wv~~~~c 122 (374)
|| +|.+.+++|||-+++-+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 7888999999999999976544
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.97 E-value=20 Score=30.08 Aligned_cols=27 Identities=33% Similarity=0.337 Sum_probs=23.8
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEec
Q 017265 91 YLIRISIGTPPTERLAVADTGSDLIWTQC 119 (374)
Q Consensus 91 Y~~~i~iGtP~q~~~l~~DTGS~~~Wv~~ 119 (374)
=.+.+.|| +|.+.+++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 46889999 8999999999999999844
No 52
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=40.14 E-value=29 Score=31.25 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=27.7
Q ss_pred ccccCCccEEEE---EEecC---CCceEEEEEEcCCCceeEecCC
Q 017265 83 DIIPNNANYLIR---ISIGT---PPTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 83 ~~~~~~~~Y~~~---i~iGt---P~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
++......|.+. |.||. +.....++||||++++++|...
T Consensus 187 p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 187 PVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp ECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred EccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 343344567665 56875 2467899999999999998763
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.45 E-value=29 Score=31.16 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=27.0
Q ss_pred cccccCCccEEEE---EEecC-CCceEEEEEEcCCCceeEecCC
Q 017265 82 ADIIPNNANYLIR---ISIGT-PPTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGt-P~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
.++......|.+. |.||. +.....++||||++++++|...
T Consensus 182 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~~ 225 (323)
T 1bxo_A 182 TGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSV 225 (323)
T ss_dssp EECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHHH
T ss_pred EECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHHH
Confidence 3343334556655 56774 3345689999999999998763
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.70 E-value=40 Score=30.21 Aligned_cols=40 Identities=30% Similarity=0.306 Sum_probs=27.5
Q ss_pred cccccCCccEEEE---EEecCC---CceEEEEEEcCCCceeEecCC
Q 017265 82 ADIIPNNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGtP---~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
.++......|.+. |.||.- .....+++|||++++++|...
T Consensus 181 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~ 226 (325)
T 1ibq_A 181 TDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDEI 226 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHHH
T ss_pred EEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHHH
Confidence 3443334566654 678752 356789999999999998753
No 55
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=34.68 E-value=33 Score=30.81 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=27.1
Q ss_pred cccccCCccEEEE---EEecCC---CceEEEEEEcCCCceeEecCC
Q 017265 82 ADIIPNNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGtP---~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
.++......|.+. |.||.- .....++||||++++++|...
T Consensus 185 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~ 230 (329)
T 1oew_A 185 TAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV 230 (329)
T ss_dssp EECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHH
T ss_pred EEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHH
Confidence 3343334556554 678752 245789999999999998763
No 56
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=33.72 E-value=36 Score=30.50 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=26.6
Q ss_pred cccccCCccEEEE---EEecC--CCceEEEEEEcCCCceeEecC
Q 017265 82 ADIIPNNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (374)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGt--P~q~~~l~~DTGS~~~Wv~~~ 120 (374)
.++......|.+. |.||. +.....++||||++++++|..
T Consensus 186 ~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 186 VPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 3333334556554 67775 234578999999999999876
No 57
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=32.34 E-value=46 Score=28.33 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=23.4
Q ss_pred ccEEEE---EEecC-----CCceEEEEEEcCCCceeEecC
Q 017265 89 ANYLIR---ISIGT-----PPTERLAVADTGSDLIWTQCE 120 (374)
Q Consensus 89 ~~Y~~~---i~iGt-----P~q~~~l~~DTGS~~~Wv~~~ 120 (374)
..|.+. |.||. +.....++||||++++++|..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456654 67774 234578999999999999754
No 58
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=31.30 E-value=39 Score=30.26 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=25.0
Q ss_pred CCccEEEE---EEecC--CCceEEEEEEcCCCceeEecCC
Q 017265 87 NNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 87 ~~~~Y~~~---i~iGt--P~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
....|.+. |.||. +.+...+++|||++++++|...
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~~ 226 (323)
T 1izd_A 187 SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSI 226 (323)
T ss_dssp TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHHH
Confidence 34556665 46765 2345789999999999998753
No 59
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=26.16 E-value=59 Score=27.49 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=23.9
Q ss_pred ccEEE---EEEecCC----CceEEEEEEcCCCceeEecCC
Q 017265 89 ANYLI---RISIGTP----PTERLAVADTGSDLIWTQCEP 121 (374)
Q Consensus 89 ~~Y~~---~i~iGtP----~q~~~l~~DTGS~~~Wv~~~~ 121 (374)
..|.+ .|.||.- .....+++|||++++++|...
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 45655 4678742 245689999999999998753
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.29 E-value=57 Score=30.22 Aligned_cols=15 Identities=13% Similarity=0.065 Sum_probs=13.6
Q ss_pred EEEEcCCCceeEecC
Q 017265 106 AVADTGSDLIWTQCE 120 (374)
Q Consensus 106 l~~DTGS~~~Wv~~~ 120 (374)
++||||+++++++..
T Consensus 262 aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 262 TMISTSTPHMVLQQS 276 (403)
T ss_dssp EEECSSCSSEEECHH
T ss_pred EEEECCCccEEeCHH
Confidence 899999999999765
No 61
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=21.25 E-value=1e+02 Score=27.93 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=22.7
Q ss_pred cEEEE---EEecCC----CceEEEE-EEcCCCceeEecCCC
Q 017265 90 NYLIR---ISIGTP----PTERLAV-ADTGSDLIWTQCEPC 122 (374)
Q Consensus 90 ~Y~~~---i~iGtP----~q~~~l~-~DTGS~~~Wv~~~~c 122 (374)
.|.+. |.||.- .....++ ||||++++++|....
T Consensus 210 ~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~ 250 (361)
T 1mpp_A 210 FWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFA 250 (361)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHH
T ss_pred EEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHH
Confidence 45454 678741 1234688 999999999987643
Done!