Query 017266
Match_columns 374
No_of_seqs 228 out of 1772
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 07:03:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017266.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017266hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02207 UDP-glycosyltransfera 100.0 2.5E-59 5.4E-64 451.4 34.3 338 23-372 114-466 (468)
2 PLN02562 UDP-glycosyltransfera 100.0 3.3E-59 7.1E-64 451.9 33.5 353 4-370 86-448 (448)
3 PLN02555 limonoid glucosyltran 100.0 3.9E-59 8.4E-64 452.0 33.7 360 4-371 98-469 (480)
4 PLN02410 UDP-glucoronosyl/UDP- 100.0 7.5E-59 1.6E-63 448.3 33.9 354 3-371 85-450 (451)
5 PLN02152 indole-3-acetate beta 100.0 9.1E-59 2E-63 446.6 32.6 350 3-369 87-454 (455)
6 PLN02173 UDP-glucosyl transfer 100.0 3.3E-58 7.1E-63 442.1 31.9 346 3-370 85-447 (449)
7 PLN02992 coniferyl-alcohol glu 100.0 1.2E-57 2.7E-62 440.5 32.0 348 4-371 89-469 (481)
8 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.7E-57 3.8E-62 441.7 32.0 359 5-373 100-473 (477)
9 PLN03015 UDP-glucosyl transfer 100.0 1.3E-57 2.8E-62 438.0 30.7 349 3-370 91-467 (470)
10 PLN00164 glucosyltransferase; 100.0 2E-57 4.4E-62 442.5 32.1 354 4-373 95-475 (480)
11 PLN02554 UDP-glycosyltransfera 100.0 2.7E-57 5.8E-62 443.1 32.8 359 5-371 90-478 (481)
12 PLN03004 UDP-glycosyltransfera 100.0 1.4E-57 3.1E-62 437.9 29.4 344 4-360 95-450 (451)
13 PLN02167 UDP-glycosyltransfera 100.0 5.1E-57 1.1E-61 440.5 30.8 358 4-371 95-472 (475)
14 PLN02210 UDP-glucosyl transfer 100.0 1.8E-56 4E-61 433.2 32.6 347 5-370 91-454 (456)
15 PLN02670 transferase, transfer 100.0 6.8E-55 1.5E-59 421.0 30.1 350 4-372 97-466 (472)
16 PLN02448 UDP-glycosyltransfera 100.0 1.3E-54 2.7E-59 422.7 31.6 350 4-371 93-457 (459)
17 PLN02764 glycosyltransferase f 100.0 1.6E-54 3.4E-59 415.4 31.2 333 5-372 96-446 (453)
18 PLN02534 UDP-glycosyltransfera 100.0 1.8E-54 4E-59 420.0 31.8 352 5-372 105-487 (491)
19 PLN02208 glycosyltransferase f 100.0 1.5E-54 3.2E-59 417.4 29.5 317 24-372 107-440 (442)
20 PLN03007 UDP-glucosyltransfera 100.0 9.5E-54 2.1E-58 418.6 31.5 338 24-372 122-481 (482)
21 PLN00414 glycosyltransferase f 100.0 4.2E-52 9.2E-57 400.8 29.4 318 24-372 107-441 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.2E-46 2.6E-51 369.2 27.1 317 23-372 135-467 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 3.5E-49 7.5E-54 391.7 -3.7 316 24-372 119-444 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 3.1E-38 6.8E-43 313.1 19.6 308 24-351 114-439 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 6.5E-34 1.4E-38 274.0 28.3 197 127-350 179-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 3.3E-31 7.2E-36 255.9 21.3 275 23-350 103-387 (401)
27 COG1819 Glycosyl transferases, 100.0 1.7E-29 3.8E-34 241.8 19.0 190 146-371 211-400 (406)
28 PRK12446 undecaprenyldiphospho 99.8 2.5E-17 5.4E-22 155.8 20.7 145 183-343 182-335 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.7 1.9E-16 4E-21 148.3 19.5 121 186-331 192-317 (318)
30 COG0707 MurG UDP-N-acetylgluco 99.7 6.1E-16 1.3E-20 145.1 17.7 165 185-369 182-354 (357)
31 TIGR00661 MJ1255 conserved hyp 99.7 3.9E-15 8.5E-20 139.5 19.9 127 186-338 188-318 (321)
32 PF04101 Glyco_tran_28_C: Glyc 99.6 2.1E-16 4.5E-21 133.9 -2.4 139 188-337 1-147 (167)
33 PRK00726 murG undecaprenyldiph 99.5 4.2E-12 9.1E-17 120.8 19.6 166 185-368 182-354 (357)
34 cd03785 GT1_MurG MurG is an N- 99.4 8.7E-12 1.9E-16 118.1 19.6 195 128-345 135-335 (350)
35 PRK13608 diacylglycerol glucos 99.4 6.7E-11 1.5E-15 113.9 20.8 138 185-340 201-344 (391)
36 TIGR00215 lpxB lipid-A-disacch 99.4 1.3E-11 2.8E-16 118.4 14.8 172 183-366 188-383 (385)
37 PLN02605 monogalactosyldiacylg 99.3 1.6E-10 3.5E-15 111.0 21.2 141 184-340 204-354 (382)
38 PRK13609 diacylglycerol glucos 99.3 3.9E-10 8.5E-15 108.2 20.6 141 185-343 201-347 (380)
39 TIGR03492 conserved hypothetic 99.2 1.5E-09 3.3E-14 104.4 18.6 189 127-342 160-372 (396)
40 PRK00025 lpxB lipid-A-disaccha 99.1 8.4E-09 1.8E-13 98.9 18.0 107 254-368 255-374 (380)
41 TIGR03590 PseG pseudaminic aci 99.0 8.5E-09 1.8E-13 94.6 16.1 103 187-300 171-278 (279)
42 TIGR01133 murG undecaprenyldip 98.9 8.7E-09 1.9E-13 97.5 12.5 85 253-343 243-330 (348)
43 COG4671 Predicted glycosyl tra 98.9 1.4E-07 3E-12 85.8 15.9 181 127-335 167-366 (400)
44 cd03814 GT1_like_2 This family 98.8 4.9E-06 1.1E-10 78.3 24.6 139 188-347 198-345 (364)
45 PRK14089 ipid-A-disaccharide s 98.7 5.7E-07 1.2E-11 84.5 17.2 155 187-366 168-344 (347)
46 PRK05749 3-deoxy-D-manno-octul 98.5 5.1E-05 1.1E-09 74.0 23.7 88 246-343 304-397 (425)
47 KOG3349 Predicted glycosyltran 98.4 1E-06 2.2E-11 70.3 8.0 115 188-310 5-131 (170)
48 TIGR00236 wecB UDP-N-acetylglu 98.4 4.7E-06 1E-10 79.5 14.2 155 187-366 198-362 (365)
49 cd05844 GT1_like_7 Glycosyltra 98.3 6.8E-05 1.5E-09 71.1 19.8 86 243-340 244-342 (367)
50 PLN02871 UDP-sulfoquinovose:DA 98.3 0.00044 9.6E-09 68.3 25.3 131 188-340 264-406 (465)
51 PRK01021 lpxB lipid-A-disaccha 98.3 6.7E-05 1.4E-09 74.4 19.1 201 144-362 377-599 (608)
52 cd03801 GT1_YqgM_like This fam 98.2 0.0011 2.4E-08 61.6 25.0 88 243-342 255-349 (374)
53 PF02684 LpxB: Lipid-A-disacch 98.2 0.00014 3.1E-09 68.9 18.0 199 145-362 150-368 (373)
54 cd03800 GT1_Sucrose_synthase T 98.2 0.00077 1.7E-08 64.5 23.2 85 243-339 282-373 (398)
55 cd03798 GT1_wlbH_like This fam 98.1 0.002 4.3E-08 60.2 24.8 83 243-337 258-347 (377)
56 cd03818 GT1_ExpC_like This fam 98.1 0.0011 2.3E-08 64.1 22.5 88 243-340 280-372 (396)
57 cd03817 GT1_UGDG_like This fam 98.1 0.0011 2.4E-08 62.2 21.5 83 243-338 258-347 (374)
58 cd03804 GT1_wbaZ_like This fam 98.0 0.00013 2.9E-09 68.9 15.0 135 189-343 197-336 (351)
59 cd03794 GT1_wbuB_like This fam 98.0 0.00058 1.2E-08 64.4 19.3 140 187-342 220-373 (394)
60 cd03820 GT1_amsD_like This fam 98.0 0.0029 6.3E-08 58.5 23.0 93 243-347 234-332 (348)
61 cd03808 GT1_cap1E_like This fa 98.0 0.0046 1E-07 57.4 23.5 137 187-340 188-335 (359)
62 cd03825 GT1_wcfI_like This fam 97.9 0.0041 9E-08 58.6 22.3 84 243-338 243-334 (365)
63 COG5017 Uncharacterized conser 97.8 0.00024 5.2E-09 56.0 10.2 110 189-314 2-124 (161)
64 PF13844 Glyco_transf_41: Glyc 97.8 0.00039 8.4E-09 67.4 13.6 141 186-340 284-436 (468)
65 cd03821 GT1_Bme6_like This fam 97.8 0.0092 2E-07 55.8 22.9 86 243-342 261-353 (375)
66 cd03823 GT1_ExpE7_like This fa 97.8 0.00083 1.8E-08 62.8 15.6 139 187-343 191-338 (359)
67 TIGR02472 sucr_P_syn_N sucrose 97.8 0.0064 1.4E-07 59.6 22.0 84 243-338 316-410 (439)
68 COG3980 spsG Spore coat polysa 97.8 0.00029 6.3E-09 62.7 10.6 144 188-347 160-306 (318)
69 cd03786 GT1_UDP-GlcNAc_2-Epime 97.8 0.00019 4.1E-09 68.2 10.5 139 186-341 198-344 (363)
70 cd03811 GT1_WabH_like This fam 97.7 0.016 3.4E-07 53.6 22.6 89 243-343 245-341 (353)
71 TIGR02918 accessory Sec system 97.7 0.0064 1.4E-07 60.5 20.5 98 243-346 375-482 (500)
72 cd04946 GT1_AmsK_like This fam 97.7 0.00099 2.1E-08 64.6 14.6 111 243-365 288-405 (407)
73 PRK15484 lipopolysaccharide 1, 97.7 0.0036 7.8E-08 60.1 17.7 85 243-338 256-348 (380)
74 PF00534 Glycos_transf_1: Glyc 97.6 0.00039 8.4E-09 58.5 9.1 91 243-345 72-169 (172)
75 cd04962 GT1_like_5 This family 97.6 0.0045 9.8E-08 58.7 17.4 86 243-340 252-342 (371)
76 COG1519 KdtA 3-deoxy-D-manno-o 97.6 0.032 6.9E-07 53.0 22.2 202 126-345 176-397 (419)
77 cd03795 GT1_like_4 This family 97.6 0.00066 1.4E-08 63.8 11.2 137 188-339 192-337 (357)
78 PRK15427 colanic acid biosynth 97.6 0.0032 6.9E-08 61.1 16.1 84 243-338 278-375 (406)
79 cd03813 GT1_like_3 This family 97.5 0.031 6.6E-07 55.4 22.9 89 243-342 353-450 (475)
80 TIGR02468 sucrsPsyn_pln sucros 97.4 0.021 4.7E-07 60.7 20.9 91 243-343 547-646 (1050)
81 cd03822 GT1_ecORF704_like This 97.4 0.0062 1.4E-07 57.1 15.9 85 243-340 246-340 (366)
82 cd03807 GT1_WbnK_like This fam 97.3 0.0086 1.9E-07 55.8 15.4 80 243-336 250-334 (365)
83 cd03799 GT1_amsK_like This is 97.3 0.0062 1.3E-07 57.2 13.9 83 243-337 235-330 (355)
84 TIGR03449 mycothiol_MshA UDP-N 97.3 0.0081 1.8E-07 58.0 15.0 89 243-343 282-377 (405)
85 PRK10307 putative glycosyl tra 97.3 0.011 2.3E-07 57.4 15.8 85 244-338 284-377 (412)
86 PF04007 DUF354: Protein of un 97.3 0.029 6.4E-07 52.6 17.6 126 185-332 178-308 (335)
87 cd03806 GT1_ALG11_like This fa 97.3 0.048 1E-06 53.1 19.9 80 243-336 304-394 (419)
88 PRK09922 UDP-D-galactose:(gluc 97.2 0.0055 1.2E-07 58.3 12.9 133 188-336 181-326 (359)
89 COG0763 LpxB Lipid A disacchar 97.2 0.0087 1.9E-07 56.1 13.6 200 149-369 157-379 (381)
90 PLN02949 transferase, transfer 97.2 0.028 6.1E-07 55.4 17.9 79 243-334 334-422 (463)
91 TIGR03088 stp2 sugar transfera 97.1 0.018 3.8E-07 54.9 15.1 83 244-338 255-342 (374)
92 cd04951 GT1_WbdM_like This fam 97.1 0.019 4E-07 54.0 14.7 88 243-344 244-337 (360)
93 cd04949 GT1_gtfA_like This fam 97.1 0.0061 1.3E-07 58.0 11.4 85 243-336 260-347 (372)
94 TIGR03087 stp1 sugar transfera 97.0 0.027 6E-07 54.3 15.6 84 243-340 279-368 (397)
95 cd03809 GT1_mtfB_like This fam 97.0 0.017 3.7E-07 54.1 13.4 90 243-346 252-348 (365)
96 cd03816 GT1_ALG1_like This fam 97.0 0.011 2.4E-07 57.4 12.3 76 245-334 295-381 (415)
97 PF02350 Epimerase_2: UDP-N-ac 96.9 0.0016 3.4E-08 61.7 5.4 141 184-343 178-327 (346)
98 cd04950 GT1_like_1 Glycosyltra 96.8 0.055 1.2E-06 51.8 15.9 180 125-335 151-341 (373)
99 TIGR02149 glgA_Coryne glycogen 96.8 0.048 1.1E-06 52.1 15.6 140 188-340 202-358 (388)
100 cd03805 GT1_ALG2_like This fam 96.8 0.013 2.8E-07 56.1 11.3 84 243-339 279-369 (392)
101 PF13692 Glyco_trans_1_4: Glyc 96.8 0.0035 7.6E-08 50.3 6.3 80 243-334 52-135 (135)
102 PRK15179 Vi polysaccharide bio 96.8 0.043 9.3E-07 56.6 15.4 93 243-345 573-674 (694)
103 cd03819 GT1_WavL_like This fam 96.8 0.022 4.8E-07 53.5 12.6 136 187-336 185-333 (355)
104 PRK09814 beta-1,6-galactofuran 96.7 0.0089 1.9E-07 56.3 9.4 108 243-367 206-331 (333)
105 cd03812 GT1_CapH_like This fam 96.7 0.026 5.6E-07 53.1 12.3 90 243-345 248-342 (358)
106 cd03796 GT1_PIG-A_like This fa 96.6 0.066 1.4E-06 51.6 15.0 79 243-335 249-334 (398)
107 KOG4626 O-linked N-acetylgluco 96.4 0.046 9.9E-07 54.1 11.9 120 187-313 759-889 (966)
108 COG3914 Spy Predicted O-linked 96.4 0.042 9.1E-07 53.9 11.3 120 184-311 427-560 (620)
109 PLN00142 sucrose synthase 96.4 1.5 3.3E-05 46.0 23.1 88 243-342 641-744 (815)
110 cd03802 GT1_AviGT4_like This f 96.3 0.058 1.3E-06 50.1 11.9 129 189-335 173-309 (335)
111 cd04955 GT1_like_6 This family 96.2 0.084 1.8E-06 49.6 12.8 81 243-339 247-335 (363)
112 cd03792 GT1_Trehalose_phosphor 96.1 0.23 4.9E-06 47.4 15.1 85 243-341 251-344 (372)
113 PLN02501 digalactosyldiacylgly 96.0 0.84 1.8E-05 46.8 18.6 77 246-337 603-684 (794)
114 PRK15490 Vi polysaccharide bio 95.9 0.2 4.4E-06 50.0 13.9 65 243-314 454-523 (578)
115 PRK10017 colanic acid biosynth 95.8 0.15 3.3E-06 49.6 12.5 177 177-369 225-422 (426)
116 PF06722 DUF1205: Protein of u 95.8 0.019 4E-07 43.5 4.6 53 173-225 27-84 (97)
117 TIGR03568 NeuC_NnaA UDP-N-acet 95.4 0.13 2.9E-06 49.0 10.4 132 187-337 202-341 (365)
118 TIGR02470 sucr_synth sucrose s 95.3 4.6 9.9E-05 42.4 26.1 88 243-340 618-719 (784)
119 PHA01633 putative glycosyl tra 95.0 0.84 1.8E-05 42.9 14.1 85 243-334 200-307 (335)
120 PRK14098 glycogen synthase; Pr 94.8 0.45 9.8E-06 47.3 12.5 132 188-332 308-449 (489)
121 cd03791 GT1_Glycogen_synthase_ 94.7 0.29 6.3E-06 48.4 10.9 132 188-333 297-441 (476)
122 PHA01630 putative group 1 glyc 94.1 2.6 5.6E-05 39.7 15.2 91 251-348 197-311 (331)
123 TIGR02095 glgA glycogen/starch 93.8 0.93 2E-05 44.8 12.3 135 188-333 292-436 (473)
124 PLN02275 transferase, transfer 93.8 0.55 1.2E-05 44.8 10.4 75 244-332 286-371 (371)
125 PF13524 Glyco_trans_1_2: Glyc 93.7 0.75 1.6E-05 34.0 8.9 68 269-349 9-78 (92)
126 TIGR03713 acc_sec_asp1 accesso 93.5 0.83 1.8E-05 45.7 11.1 76 244-336 409-490 (519)
127 PRK00654 glgA glycogen synthas 93.4 1.1 2.3E-05 44.4 11.9 84 242-333 335-427 (466)
128 PF06258 Mito_fiss_Elm1: Mitoc 93.4 1.6 3.4E-05 40.6 12.3 162 127-313 97-282 (311)
129 COG4370 Uncharacterized protei 92.5 0.4 8.6E-06 43.6 6.5 94 244-345 294-390 (412)
130 PRK10125 putative glycosyl tra 92.4 3 6.4E-05 40.5 13.2 101 202-328 256-365 (405)
131 COG0381 WecB UDP-N-acetylgluco 91.8 1 2.2E-05 42.6 8.6 91 244-348 262-355 (383)
132 PLN02846 digalactosyldiacylgly 91.3 3.3 7.2E-05 40.8 12.1 73 248-335 288-364 (462)
133 TIGR02919 accessory Sec system 91.1 2.8 6E-05 41.0 11.3 92 244-347 328-425 (438)
134 TIGR02400 trehalose_OtsA alpha 89.6 2.9 6.3E-05 41.2 10.2 101 250-370 342-455 (456)
135 TIGR02193 heptsyl_trn_I lipopo 89.4 3.3 7.1E-05 38.5 10.0 141 179-332 172-319 (319)
136 cd01635 Glycosyltransferase_GT 87.4 2.1 4.6E-05 36.6 7.0 48 243-292 160-215 (229)
137 PLN02316 synthase/transferase 87.4 13 0.00028 40.3 13.7 114 243-366 899-1028(1036)
138 PLN03063 alpha,alpha-trehalose 85.2 12 0.00027 39.6 12.3 99 256-370 371-476 (797)
139 cd03788 GT1_TPS Trehalose-6-Ph 84.1 4.3 9.4E-05 40.0 8.0 101 249-369 346-459 (460)
140 PRK14099 glycogen synthase; Pr 83.7 19 0.00042 35.7 12.4 90 243-340 349-453 (485)
141 PLN02939 transferase, transfer 83.6 25 0.00054 37.8 13.4 91 243-340 836-941 (977)
142 COG3660 Predicted nucleoside-d 81.7 9.8 0.00021 34.2 8.2 143 128-288 110-271 (329)
143 PF07429 Glyco_transf_56: 4-al 79.4 34 0.00073 32.2 11.2 82 244-333 245-332 (360)
144 PRK02797 4-alpha-L-fucosyltran 78.5 42 0.00092 31.1 11.5 81 244-332 206-292 (322)
145 COG0438 RfaG Glycosyltransfera 77.6 34 0.00073 30.7 11.3 87 244-342 257-350 (381)
146 cd03789 GT1_LPS_heptosyltransf 76.5 6.5 0.00014 35.7 6.0 95 186-288 121-223 (279)
147 COG0052 RpsB Ribosomal protein 73.3 5.6 0.00012 35.3 4.3 35 23-57 155-191 (252)
148 TIGR02398 gluc_glyc_Psyn gluco 72.9 54 0.0012 32.6 11.6 105 247-371 365-482 (487)
149 PF04464 Glyphos_transf: CDP-G 72.4 4.1 8.9E-05 38.8 3.7 99 243-350 251-353 (369)
150 PF05159 Capsule_synth: Capsul 70.2 14 0.0003 33.4 6.5 41 246-289 185-225 (269)
151 PF03033 Glyco_transf_28: Glyc 69.9 3.4 7.3E-05 33.0 2.2 35 23-57 99-133 (139)
152 PF06506 PrpR_N: Propionate ca 69.1 6.8 0.00015 33.1 3.9 33 259-292 31-63 (176)
153 KOG2941 Beta-1,4-mannosyltrans 68.1 1.1E+02 0.0023 29.0 11.4 129 184-333 252-404 (444)
154 cd03793 GT1_Glycogen_synthase_ 68.1 21 0.00046 36.1 7.6 79 254-335 468-553 (590)
155 PRK14501 putative bifunctional 66.5 22 0.00048 37.3 7.9 108 248-371 346-462 (726)
156 COG0859 RfaF ADP-heptose:LPS h 66.0 18 0.0004 33.9 6.6 95 186-288 175-276 (334)
157 COG4394 Uncharacterized protei 65.4 56 0.0012 29.9 8.9 87 198-287 185-281 (370)
158 PF01075 Glyco_transf_9: Glyco 62.8 14 0.0003 32.8 4.9 98 185-288 104-208 (247)
159 KOG0853 Glycosyltransferase [C 62.4 4.3 9.3E-05 40.0 1.6 62 274-343 381-442 (495)
160 TIGR02201 heptsyl_trn_III lipo 61.4 29 0.00062 32.6 7.0 98 185-288 180-285 (344)
161 PF00731 AIRC: AIR carboxylase 61.3 78 0.0017 26.0 8.5 140 188-350 2-148 (150)
162 PRK10964 ADP-heptose:LPS hepto 59.8 27 0.00058 32.5 6.4 134 187-333 179-321 (322)
163 PRK04885 ppnK inorganic polyph 59.2 16 0.00036 33.1 4.7 53 260-334 35-93 (265)
164 TIGR02195 heptsyl_trn_II lipop 58.3 31 0.00068 32.1 6.7 96 185-288 173-276 (334)
165 PF12000 Glyco_trans_4_3: Gkyc 57.9 27 0.00059 29.3 5.5 44 8-53 52-96 (171)
166 PRK10916 ADP-heptose:LPS hepto 54.1 37 0.00079 32.0 6.4 96 185-288 179-286 (348)
167 PF06506 PrpR_N: Propionate ca 53.9 16 0.00035 30.7 3.6 45 6-57 111-155 (176)
168 PRK02155 ppnK NAD(+)/NADH kina 53.7 26 0.00056 32.3 5.1 55 259-335 62-120 (291)
169 PRK14077 pnk inorganic polypho 53.0 24 0.00052 32.4 4.7 57 257-335 61-121 (287)
170 PRK12311 rpsB 30S ribosomal pr 52.7 19 0.0004 33.7 3.9 35 23-57 151-187 (326)
171 COG0801 FolK 7,8-dihydro-6-hyd 52.3 31 0.00067 28.6 4.8 36 188-223 3-38 (160)
172 cd01425 RPS2 Ribosomal protein 50.8 19 0.00042 30.9 3.6 34 23-56 126-161 (193)
173 cd06559 Endonuclease_V Endonuc 50.7 15 0.00033 32.0 2.9 39 9-52 83-128 (208)
174 PF04493 Endonuclease_5: Endon 50.7 21 0.00045 31.1 3.7 41 7-52 77-124 (206)
175 PRK10422 lipopolysaccharide co 50.5 60 0.0013 30.6 7.3 97 186-288 183-287 (352)
176 PRK01231 ppnK inorganic polyph 49.2 80 0.0017 29.1 7.6 54 260-335 62-119 (295)
177 PLN02470 acetolactate synthase 49.0 76 0.0016 32.4 8.2 92 192-289 2-109 (585)
178 PF10093 DUF2331: Uncharacteri 46.9 2.7E+02 0.0058 26.7 10.9 88 197-288 190-288 (374)
179 PRK02649 ppnK inorganic polyph 46.6 33 0.00071 31.8 4.6 55 259-335 67-125 (305)
180 PRK01911 ppnK inorganic polyph 46.1 36 0.00078 31.4 4.8 57 257-335 61-121 (292)
181 PF06925 MGDG_synth: Monogalac 45.9 24 0.00052 29.4 3.3 32 23-54 88-125 (169)
182 PRK03359 putative electron tra 45.3 35 0.00075 30.8 4.4 30 25-54 113-148 (256)
183 cd07025 Peptidase_S66 LD-Carbo 45.1 37 0.0008 31.1 4.7 76 197-291 44-121 (282)
184 TIGR00347 bioD dethiobiotin sy 44.2 57 0.0012 26.8 5.4 44 8-56 88-140 (166)
185 PRK12342 hypothetical protein; 43.9 34 0.00075 30.8 4.2 30 25-54 110-145 (254)
186 PRK12446 undecaprenyldiphospho 43.8 76 0.0016 30.0 6.8 95 188-288 4-120 (352)
187 PRK04539 ppnK inorganic polyph 43.8 39 0.00084 31.2 4.6 57 257-335 65-125 (296)
188 cd01018 ZntC Metal binding pro 43.5 72 0.0016 28.8 6.3 46 6-55 203-250 (266)
189 CHL00067 rps2 ribosomal protei 43.4 27 0.00059 30.9 3.4 35 23-57 160-196 (230)
190 PRK05299 rpsB 30S ribosomal pr 42.4 29 0.00063 31.3 3.5 35 23-57 156-192 (258)
191 PRK03378 ppnK inorganic polyph 42.2 39 0.00085 31.1 4.4 56 257-335 60-120 (292)
192 PRK02231 ppnK inorganic polyph 41.5 35 0.00077 31.1 3.9 57 255-333 37-97 (272)
193 PRK03372 ppnK inorganic polyph 40.6 43 0.00092 31.1 4.3 55 259-335 71-129 (306)
194 PLN03064 alpha,alpha-trehalose 40.3 3.2E+02 0.0069 29.8 11.2 100 252-370 448-560 (934)
195 TIGR01011 rpsB_bact ribosomal 40.2 35 0.00076 30.1 3.6 35 23-57 154-190 (225)
196 cd01840 SGNH_hydrolase_yrhL_li 39.8 75 0.0016 25.6 5.4 38 185-223 50-87 (150)
197 TIGR01470 cysG_Nterm siroheme 37.8 2.7E+02 0.0058 24.1 9.0 144 188-351 12-165 (205)
198 PF05225 HTH_psq: helix-turn-h 37.5 61 0.0013 20.4 3.4 25 320-344 1-26 (45)
199 cd07062 Peptidase_S66_mccF_lik 37.5 57 0.0012 30.3 4.8 75 198-291 49-125 (308)
200 PRK14092 2-amino-4-hydroxy-6-h 36.7 81 0.0018 26.3 5.0 31 184-214 5-35 (163)
201 PRK03501 ppnK inorganic polyph 36.5 61 0.0013 29.4 4.6 54 261-335 40-98 (264)
202 PRK10353 3-methyl-adenine DNA 36.4 1.2E+02 0.0027 25.9 6.1 79 287-365 22-119 (187)
203 PRK01185 ppnK inorganic polyph 36.2 56 0.0012 29.8 4.3 54 260-335 52-106 (271)
204 COG1698 Uncharacterized protei 35.2 1.5E+02 0.0033 21.9 5.5 33 324-356 18-50 (93)
205 TIGR00725 conserved hypothetic 34.3 90 0.002 25.8 5.0 99 174-290 21-123 (159)
206 KOG1615 Phosphoserine phosphat 34.0 62 0.0013 27.8 3.9 41 4-48 88-129 (227)
207 COG0299 PurN Folate-dependent 34.0 1E+02 0.0023 26.5 5.3 47 8-54 13-59 (200)
208 PF07355 GRDB: Glycine/sarcosi 33.8 89 0.0019 29.4 5.3 41 7-51 67-117 (349)
209 PRK14075 pnk inorganic polypho 33.7 67 0.0015 28.9 4.4 54 260-335 41-95 (256)
210 PLN02935 Bifunctional NADH kin 32.7 70 0.0015 31.8 4.6 54 259-335 261-319 (508)
211 TIGR02329 propionate_PrpR prop 32.6 89 0.0019 31.5 5.5 42 6-54 131-172 (526)
212 cd07039 TPP_PYR_POX Pyrimidine 32.3 1E+02 0.0022 25.5 5.1 27 263-289 64-96 (164)
213 TIGR01012 Sa_S2_E_A ribosomal 31.7 47 0.001 28.6 2.9 35 23-57 107-143 (196)
214 PF05693 Glycogen_syn: Glycoge 31.5 49 0.0011 33.6 3.4 90 253-347 462-565 (633)
215 PF02350 Epimerase_2: UDP-N-ac 31.1 68 0.0015 30.3 4.2 39 7-52 57-98 (346)
216 KOG2199 Signal transducing ada 31.0 75 0.0016 30.3 4.2 60 306-374 75-141 (462)
217 PRK05579 bifunctional phosphop 31.0 4.1E+02 0.0089 25.7 9.6 136 188-333 9-182 (399)
218 COG0503 Apt Adenine/guanine ph 30.7 1.1E+02 0.0024 25.9 5.0 27 25-51 54-82 (179)
219 COG1817 Uncharacterized protei 30.5 2E+02 0.0043 26.8 6.8 46 6-55 13-58 (346)
220 PF08030 NAD_binding_6: Ferric 30.4 39 0.00084 27.4 2.2 38 188-225 4-46 (156)
221 COG2159 Predicted metal-depend 30.0 1.9E+02 0.0041 26.6 6.9 90 175-279 117-211 (293)
222 COG3195 Uncharacterized protei 29.9 2.5E+02 0.0054 23.4 6.6 92 252-348 63-163 (176)
223 PRK04020 rps2P 30S ribosomal p 29.9 55 0.0012 28.4 3.0 34 24-57 114-149 (204)
224 KOG0202 Ca2+ transporting ATPa 29.7 5.1E+02 0.011 27.8 10.2 168 188-372 573-750 (972)
225 KOG0081 GTPase Rab27, small G 29.6 1.7E+02 0.0036 24.3 5.5 47 8-54 108-164 (219)
226 PLN02929 NADH kinase 29.6 75 0.0016 29.4 4.0 67 259-335 63-138 (301)
227 PRK06718 precorrin-2 dehydroge 29.5 2.8E+02 0.0061 23.8 7.5 141 188-351 13-165 (202)
228 cd03786 GT1_UDP-GlcNAc_2-Epime 29.4 96 0.0021 29.0 5.0 28 24-51 88-118 (363)
229 PF04909 Amidohydro_2: Amidohy 29.4 1.4E+02 0.003 26.3 5.9 58 257-315 159-232 (273)
230 PRK14076 pnk inorganic polypho 29.3 73 0.0016 32.5 4.3 54 260-335 348-405 (569)
231 PF03685 UPF0147: Uncharacteri 29.2 1.6E+02 0.0034 21.6 4.8 35 323-357 10-44 (85)
232 PTZ00254 40S ribosomal protein 29.0 59 0.0013 29.1 3.1 35 23-57 117-153 (249)
233 PRK03708 ppnK inorganic polyph 28.5 78 0.0017 28.9 4.0 29 260-290 57-88 (277)
234 cd01141 TroA_d Periplasmic bin 28.4 85 0.0018 26.2 4.0 29 24-52 69-99 (186)
235 cd01017 AdcA Metal binding pro 28.4 1.5E+02 0.0032 27.0 5.9 46 5-54 205-252 (282)
236 PF08452 DNAP_B_exo_N: DNA pol 28.2 46 0.00099 17.3 1.3 18 174-191 3-20 (22)
237 COG4231 Indolepyruvate ferredo 27.8 39 0.00084 34.3 2.0 76 267-345 457-559 (640)
238 cd03412 CbiK_N Anaerobic cobal 27.4 1E+02 0.0023 24.3 4.1 37 187-223 2-40 (127)
239 COG2179 Predicted hydrolase of 26.4 1.6E+02 0.0034 24.8 4.9 42 5-50 47-89 (175)
240 cd01980 Chlide_reductase_Y Chl 26.0 1.1E+02 0.0024 29.7 4.8 26 23-51 349-374 (416)
241 PF03796 DnaB_C: DnaB-like hel 26.0 1.3E+02 0.0028 26.9 5.0 48 5-54 113-179 (259)
242 PF01297 TroA: Periplasmic sol 25.8 89 0.0019 27.9 3.9 46 5-54 184-231 (256)
243 PLN02948 phosphoribosylaminoim 25.7 7.3E+02 0.016 25.4 11.3 90 263-356 466-564 (577)
244 PRK08410 2-hydroxyacid dehydro 25.5 3.5E+02 0.0075 25.1 7.8 102 186-330 146-248 (311)
245 PF09419 PGP_phosphatase: Mito 25.4 2.3E+02 0.005 23.7 5.9 47 3-53 58-114 (168)
246 COG1515 Nfi Deoxyinosine 3'end 25.3 55 0.0012 28.4 2.2 30 23-52 94-130 (212)
247 cd01981 Pchlide_reductase_B Pc 25.2 1.1E+02 0.0024 29.8 4.7 26 24-52 370-395 (430)
248 PF10083 DUF2321: Uncharacteri 25.2 2.5E+02 0.0054 23.1 5.8 70 288-368 78-148 (158)
249 TIGR03609 S_layer_CsaB polysac 25.0 3E+02 0.0065 25.0 7.4 98 187-290 173-277 (298)
250 PF00318 Ribosomal_S2: Ribosom 25.0 82 0.0018 27.4 3.3 35 23-57 142-178 (211)
251 PHA02542 41 41 helicase; Provi 24.9 1.3E+02 0.0029 29.8 5.1 47 6-53 284-352 (473)
252 TIGR00730 conserved hypothetic 24.8 2.7E+02 0.0058 23.5 6.3 101 175-289 23-133 (178)
253 PRK07313 phosphopantothenoylcy 24.6 4.3E+02 0.0094 22.3 9.0 50 282-332 113-178 (182)
254 PRK04330 hypothetical protein; 24.5 2.2E+02 0.0049 21.0 4.9 26 325-350 15-44 (88)
255 PF07302 AroM: AroM protein; 24.4 1.6E+02 0.0035 25.9 5.0 41 7-51 165-208 (221)
256 PRK09545 znuA high-affinity zi 24.0 1.8E+02 0.0038 27.0 5.6 45 6-54 238-284 (311)
257 PRK11617 endonuclease V; Provi 24.0 37 0.00081 29.9 1.0 40 7-51 85-131 (224)
258 TIGR03568 NeuC_NnaA UDP-N-acet 24.0 1.2E+02 0.0025 28.9 4.5 29 24-52 93-124 (365)
259 TIGR02836 spore_IV_A stage IV 23.9 2.2E+02 0.0047 28.0 6.1 75 255-332 138-233 (492)
260 PF06180 CbiK: Cobalt chelatas 23.8 1.2E+02 0.0025 27.6 4.2 38 188-225 3-43 (262)
261 PRK09219 xanthine phosphoribos 23.5 1.6E+02 0.0034 25.2 4.7 29 24-52 50-80 (189)
262 PRK10481 hypothetical protein; 23.3 1.5E+02 0.0032 26.2 4.6 40 8-51 170-212 (224)
263 PF07905 PucR: Purine cataboli 23.1 3.6E+02 0.0079 20.9 7.0 41 176-220 36-77 (123)
264 PRK00784 cobyric acid synthase 22.6 1.4E+02 0.003 29.7 4.9 32 23-54 124-166 (488)
265 TIGR02015 BchY chlorophyllide 22.6 1.2E+02 0.0026 29.6 4.3 36 9-51 344-379 (422)
266 PLN02775 Probable dihydrodipic 22.6 1.5E+02 0.0033 27.2 4.7 45 7-55 66-114 (286)
267 cd01965 Nitrogenase_MoFe_beta_ 22.4 1.1E+02 0.0023 29.9 4.0 37 8-51 359-395 (428)
268 PF01397 Terpene_synth: Terpen 22.4 2.5E+02 0.0055 23.8 5.7 43 332-374 19-61 (183)
269 PRK06932 glycerate dehydrogena 22.2 4.5E+02 0.0097 24.4 7.9 100 186-329 148-248 (314)
270 PF00072 Response_reg: Respons 21.9 2E+02 0.0043 21.1 4.7 44 9-56 32-82 (112)
271 PF12363 DUF3647: Phage protei 21.8 3.4E+02 0.0074 20.9 5.9 51 297-350 49-100 (113)
272 PF02826 2-Hacid_dh_C: D-isome 21.6 2.6E+02 0.0057 23.3 5.8 106 186-330 37-143 (178)
273 PRK00090 bioD dithiobiotin syn 21.6 2E+02 0.0042 24.9 5.2 33 23-55 102-143 (222)
274 PLN02331 phosphoribosylglycina 21.5 2E+02 0.0044 24.9 5.1 46 7-52 11-56 (207)
275 TIGR01917 gly_red_sel_B glycin 21.3 3.2E+02 0.007 26.6 6.6 45 10-58 326-377 (431)
276 cd01147 HemV-2 Metal binding p 21.2 1.4E+02 0.0031 26.3 4.3 31 24-54 74-107 (262)
277 cd07038 TPP_PYR_PDC_IPDC_like 21.1 1.3E+02 0.0029 24.7 3.8 27 263-289 60-92 (162)
278 PRK08155 acetolactate synthase 21.0 1.4E+02 0.0031 30.2 4.7 28 262-289 76-109 (564)
279 TIGR01744 XPRTase xanthine pho 20.9 2E+02 0.0043 24.6 4.8 29 24-52 50-80 (191)
280 CHL00076 chlB photochlorophyll 20.9 1.4E+02 0.003 30.0 4.5 26 24-52 374-399 (513)
281 cd01019 ZnuA Zinc binding prot 20.9 2.2E+02 0.0049 25.9 5.6 46 5-54 213-260 (286)
282 PF10820 DUF2543: Protein of u 20.8 3.1E+02 0.0067 19.2 5.4 44 324-373 36-79 (81)
283 PF07894 DUF1669: Protein of u 20.7 1.4E+02 0.0031 27.3 4.0 45 6-52 132-181 (284)
284 TIGR01918 various_sel_PB selen 20.3 3.3E+02 0.0071 26.5 6.5 46 9-58 325-377 (431)
285 COG2345 Predicted transcriptio 20.3 3.3E+02 0.0072 23.9 6.1 37 337-373 109-145 (218)
286 PLN02859 glutamine-tRNA ligase 20.3 1.9E+02 0.0041 30.7 5.2 44 299-351 108-158 (788)
287 PF01497 Peripla_BP_2: Peripla 20.2 1.6E+02 0.0035 25.4 4.4 32 25-56 61-94 (238)
288 PHA02754 hypothetical protein; 20.1 1.6E+02 0.0034 19.7 3.0 24 328-351 7-30 (67)
289 PRK06276 acetolactate synthase 20.0 2.8E+02 0.006 28.3 6.5 28 262-289 63-96 (586)
No 1
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=2.5e-59 Score=451.45 Aligned_cols=338 Identities=26% Similarity=0.486 Sum_probs=270.6
Q ss_pred CcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCC--CCcccccccccC-CCCcccc
Q 017266 23 EQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNA--TSDELILLSEDT-LPWKKNE 99 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~ 99 (374)
++++|||+|.+++|+.++|+++|||.+.|++++++....+.+++..... + ...+ ..+ ....+||+ +.++..+
T Consensus 114 ~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~---~-~~~~~~~~~-~~~~vPgl~~~l~~~d 188 (468)
T PLN02207 114 VKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSK---D-TSVFVRNSE-EMLSIPGFVNPVPANV 188 (468)
T ss_pred CCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcccc---c-cccCcCCCC-CeEECCCCCCCCChHH
Confidence 3459999999999999999999999999999999888877776543211 0 0011 111 22357998 5788888
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchh------ccCCCEEeecccCCCCCCCCccCCCCCCC
Q 017266 100 YIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPAC------DLVPNILTIGPLLGSDHSEHSAINFWPED 173 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~------~~~~~~~~vGpl~~~~~~~~~~~~~~~~~ 173 (374)
++ .+...... ...+.+....+.+++++|+||+++||+++. +..|+++.|||++.... .+........+
T Consensus 189 lp-~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~~~~~~~~ 262 (468)
T PLN02207 189 LP-SALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHPEQDLARR 262 (468)
T ss_pred Cc-chhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCCccccchh
Confidence 88 43332221 222334445677899999999999998732 45678999999986321 11000000123
Q ss_pred ccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP 253 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (374)
++|.+||+++++++||||||||...++.+++++++.+|+.++++|||+++.... ...+.+|+++.+++++|+.+++|+|
T Consensus 263 ~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~f~er~~~~g~i~~W~P 341 (468)
T PLN02207 263 DELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV-TNDDLLPEGFLDRVSGRGMICGWSP 341 (468)
T ss_pred hHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc-cccccCCHHHHhhcCCCeEEEEeCC
Confidence 579999999998899999999999999999999999999999999999985311 0123478899999999999999999
Q ss_pred hHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC----CCCCcCHHHHHHHHH
Q 017266 254 QEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD----ENGIITRQEIYNRVK 329 (374)
Q Consensus 254 q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~----~~~~~~~~~l~~~i~ 329 (374)
|.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.+..+ .++.++.++|+++|+
T Consensus 342 Q~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~ 421 (468)
T PLN02207 342 QVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIR 421 (468)
T ss_pred HHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988878999988421 123479999999999
Q ss_pred HHhc--ChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 330 ALLN--DDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 330 ~~l~--~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
++|+ +++||+||+++++++++++.+||||++++++||+++...
T Consensus 422 ~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 422 CVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9997 578999999999999999999999999999999998764
No 2
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.3e-59 Score=451.89 Aligned_cols=353 Identities=33% Similarity=0.634 Sum_probs=280.6
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.++++++++++... .+++|||+|.+++|+.++|+++|||.+.|++++++.+..+.+.+.+...+..+..+.+...
T Consensus 86 ~~~~~l~~ll~~l~~~---~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (448)
T PLN02562 86 TMPPQLERLLHKLDED---GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQL 162 (448)
T ss_pred hchHHHHHHHHHhcCC---CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccc
Confidence 5788899998887532 3469999999999999999999999999999999887777766554333322211111111
Q ss_pred ccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhc---------cCCCEEeec
Q 017266 84 ELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACD---------LVPNILTIG 154 (374)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~---------~~~~~~~vG 154 (374)
..+..+|+++.++..+++ .+..........++.+.+..+...+++.+++||+.+||+.... ..++++.||
T Consensus 163 ~~~~~~Pg~~~l~~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iG 241 (448)
T PLN02562 163 EKICVLPEQPLLSTEDLP-WLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIG 241 (448)
T ss_pred cccccCCCCCCCChhhCc-chhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEec
Confidence 122357889888888888 4332221122334445555666778999999999999985332 357899999
Q ss_pred ccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccC
Q 017266 155 PLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAA-VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAK 233 (374)
Q Consensus 155 pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~ 233 (374)
|++............++.+.+|.+||++++++++|||||||+. .++.+++++++.+|++++++|||+++.+ ....
T Consensus 242 pl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~----~~~~ 317 (448)
T PLN02562 242 PLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV----WREG 317 (448)
T ss_pred CcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC----chhh
Confidence 9987421110011223345678899999998899999999985 6799999999999999999999999754 1235
Q ss_pred CCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 234 LPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.
T Consensus 318 l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~- 396 (448)
T PLN02562 318 LPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS- 396 (448)
T ss_pred CCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-
Confidence 7888888889999999999999999999999999999999999999999999999999999999999987679998884
Q ss_pred CCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 314 DENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+ ++.++|.++|+++|+|++||+||+++++.++++ ++||||++++++||++++
T Consensus 397 -~---~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 397 -G---FGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred -C---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 3 799999999999999999999999999999887 678999999999999863
No 3
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=3.9e-59 Score=451.98 Aligned_cols=360 Identities=33% Similarity=0.581 Sum_probs=286.9
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.++++++|+++..++ ++++|||+|.+++|+.++|+++|||.++|++++++....+++++ .+..+.......+
T Consensus 98 ~~~~~l~~~l~~~~~~~--~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~----~~~~~~~~~~~~~ 171 (480)
T PLN02555 98 VGKREIPNLVKRYAEQG--RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY----HGLVPFPTETEPE 171 (480)
T ss_pred hhhHHHHHHHHHHhccC--CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh----hcCCCcccccCCC
Confidence 56788889998875334 45699999999999999999999999999999999888877653 2221100001011
Q ss_pred ccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC---CCEEeecccCCCC
Q 017266 84 ELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV---PNILTIGPLLGSD 160 (374)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~---~~~~~vGpl~~~~ 160 (374)
....+||+|.++..+++ .++.....+...++.+.+..+.+.+++.+|+||+.+||+.+.... .+++.|||++...
T Consensus 172 -~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v~~iGPl~~~~ 249 (480)
T PLN02555 172 -IDVQLPCMPLLKYDEIP-SFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGPLFKMA 249 (480)
T ss_pred -ceeecCCCCCcCHhhCc-ccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCEEEeCcccCcc
Confidence 11247999989889988 444322223344555566666777899999999999998866433 2399999997532
Q ss_pred CCC-Cc-cCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC--ccccCCCc
Q 017266 161 HSE-HS-AINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN--RSHAKLPD 236 (374)
Q Consensus 161 ~~~-~~-~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~--~~~~~~~~ 236 (374)
... .. .+..+..+.+|.+||+++++++||||||||+..++.+++.+++.+|+..+++|||+++..... .....+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~ 329 (480)
T PLN02555 250 KTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPE 329 (480)
T ss_pred ccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCCh
Confidence 111 10 122244567899999999988999999999999999999999999999999999999743100 01234788
Q ss_pred hhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC--
Q 017266 237 GFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD-- 314 (374)
Q Consensus 237 ~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~-- 314 (374)
++.++.++|+.+++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+...
T Consensus 330 ~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~ 409 (480)
T PLN02555 330 EFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEA 409 (480)
T ss_pred hhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcc
Confidence 888888899999999999999999999999999999999999999999999999999999999999988999999531
Q ss_pred CCCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
+.+.+++++|.++|+++|+++ ++|+||+++++++++++.+||||++++++||+++.+
T Consensus 410 ~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 410 ENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred ccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 123489999999999999764 499999999999999999999999999999999875
No 4
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.5e-59 Score=448.28 Aligned_cols=354 Identities=28% Similarity=0.477 Sum_probs=280.5
Q ss_pred ccchHHHHHHHHHhHh-cCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccc-cCCCCCC
Q 017266 3 AVMPGCLKNFIEQVKE-SNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGI-LDSTGNA 80 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~-~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~ 80 (374)
+.+.++++++|+++.. .. ++++|||+|.+++|+.++|+++|||.+.|++++++....+.+.+.+...+. .+.....
T Consensus 85 ~~~~~~~~~~L~~l~~~~~--~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (451)
T PLN02410 85 KECQVSFKDCLGQLVLQQG--NEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPK 162 (451)
T ss_pred HHhHHHHHHHHHHHHhccC--CCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccc
Confidence 3567788888888753 23 568999999999999999999999999999999998877666444433221 1101000
Q ss_pred CCcccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----CCEEeecc
Q 017266 81 TSDELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----PNILTIGP 155 (374)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----~~~~~vGp 155 (374)
. .....+|++++++..+++ .+.... .......+.. ...+.+++.+++||+++||+.+.+.. +++++|||
T Consensus 163 ~--~~~~~iPg~~~~~~~dlp-~~~~~~--~~~~~~~~~~-~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGp 236 (451)
T PLN02410 163 G--QQNELVPEFHPLRCKDFP-VSHWAS--LESIMELYRN-TVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGP 236 (451)
T ss_pred c--CccccCCCCCCCChHHCc-chhcCC--cHHHHHHHHH-HhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecc
Confidence 0 112247888888877777 332211 1122222222 22356899999999999998865433 58999999
Q ss_pred cCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC--ccccC
Q 017266 156 LLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN--RSHAK 233 (374)
Q Consensus 156 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~--~~~~~ 233 (374)
++..... + .+.+..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.+... .....
T Consensus 237 l~~~~~~-~--~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~ 313 (451)
T PLN02410 237 LHLVASA-P--TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIES 313 (451)
T ss_pred cccccCC-C--ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhc
Confidence 9863211 1 12223345689999999989999999999999999999999999999999999999853111 11124
Q ss_pred CCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 234 LPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
+|++|.+|+++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 314 lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~- 392 (451)
T PLN02410 314 LPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE- 392 (451)
T ss_pred CChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-
Confidence 7999999999999999999999999999999999999999999999999999999999999999999998789999997
Q ss_pred CCCCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 314 DENGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
.. +++++|+++|+++|.++ +||++|+++++.+++++.+||||++++++||++++.
T Consensus 393 ~~---~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 393 GD---LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred Cc---ccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 33 89999999999999775 599999999999999999999999999999999864
No 5
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=9.1e-59 Score=446.61 Aligned_cols=350 Identities=28% Similarity=0.509 Sum_probs=278.9
Q ss_pred ccchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCC
Q 017266 3 AVMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATS 82 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 82 (374)
+.+.++|+++++++...+ ++++|||+|.+++|+.++|+++|||.+.|++++++....+++++. +. +
T Consensus 87 ~~~~~~l~~~l~~l~~~~--~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~----~~-~------- 152 (455)
T PLN02152 87 RNGDKALSDFIEANLNGD--SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYST----GN-N------- 152 (455)
T ss_pred HhccHHHHHHHHHhhccC--CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhc----cC-C-------
Confidence 356788999998875433 457999999999999999999999999999999998887766431 10 0
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhcc--CccEEEEcCCccCCcchhccC--CCEEeecccCC
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLK--ISNWILCNSFYELDSPACDLV--PNILTIGPLLG 158 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ns~~~le~~~~~~~--~~~~~vGpl~~ 158 (374)
....+||++.++..+++ .++............+.+..+.+. .++.+|+||+++||+...... .+++.|||+++
T Consensus 153 --~~~~iPglp~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~v~~VGPL~~ 229 (455)
T PLN02152 153 --SVFEFPNLPSLEIRDLP-SFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNIEMVAVGPLLP 229 (455)
T ss_pred --CeeecCCCCCCchHHCc-hhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhcCCEEEEcccCc
Confidence 11247888888888888 544322222222333334444333 357999999999998877655 36999999975
Q ss_pred CCC-CCCc-cC--CCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC------
Q 017266 159 SDH-SEHS-AI--NFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN------ 228 (374)
Q Consensus 159 ~~~-~~~~-~~--~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~------ 228 (374)
... +... .. ..++.+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~ 309 (455)
T PLN02152 230 AEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEG 309 (455)
T ss_pred cccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccc
Confidence 311 0100 00 1123345799999999988999999999999999999999999999999999999853110
Q ss_pred cc--ccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhc
Q 017266 229 RS--HAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK 306 (374)
Q Consensus 229 ~~--~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 306 (374)
.. ...+++++.++.++|+++.+|+||.+||+|+++|+|||||||||++|++++|||||++|+++||+.||+++++.||
T Consensus 310 ~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~ 389 (455)
T PLN02152 310 EEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWK 389 (455)
T ss_pred ccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhC
Confidence 00 0124678888889999999999999999999999999999999999999999999999999999999999998788
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 307 VGSQFFPDENGIITRQEIYNRVKALLNDDG--IKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 307 ~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~--~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
+|+.+..+.++.++.++|+++|+++|+|++ ||+||+++++++++++++||||++++++||+++
T Consensus 390 ~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 390 TGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred ceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 998886544345799999999999997655 999999999999999999999999999999986
No 6
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.3e-58 Score=442.08 Aligned_cols=346 Identities=35% Similarity=0.648 Sum_probs=275.8
Q ss_pred ccchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCC
Q 017266 3 AVMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATS 82 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 82 (374)
+.+.++|+++|+++.... ++.+|||+|.+++|+.++|+++|||.+.|++++++....+++ +.+ ..+
T Consensus 85 ~~~~~~~~~~l~~~~~~~--~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~-~~~---------- 150 (449)
T PLN02173 85 TFGSKTVADIIRKHQSTD--NPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYI-NNG---------- 150 (449)
T ss_pred HhhhHHHHHHHHHhhccC--CCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHh-ccC----------
Confidence 357889999998875333 445999999999999999999999999999998887655443 111 100
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC---CCEEeecccCCC
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV---PNILTIGPLLGS 159 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~---~~~~~vGpl~~~ 159 (374)
.....+|++|.++..+++ .+.............+.+..+.+.+++.+++||+++||+.+.... ++++.|||+++.
T Consensus 151 -~~~~~~pg~p~l~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~ 228 (449)
T PLN02173 151 -SLTLPIKDLPLLELQDLP-TFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPS 228 (449)
T ss_pred -CccCCCCCCCCCChhhCC-hhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCch
Confidence 011236888888888888 433322222233444555566677899999999999998865543 479999999742
Q ss_pred C---CCC-Ccc---CCCC--CCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCcc
Q 017266 160 D---HSE-HSA---INFW--PEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRS 230 (374)
Q Consensus 160 ~---~~~-~~~---~~~~--~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~ 230 (374)
. ... .+. ...| ..+++|.+||+.+++++||||||||...++.+++.+++.+| .+.+|+|+++.+ .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~----~ 302 (449)
T PLN02173 229 MYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS----E 302 (449)
T ss_pred hhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc----c
Confidence 1 000 000 1222 23456999999999999999999999999999999999999 678899999854 2
Q ss_pred ccCCCchhhhhc-CCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhccee
Q 017266 231 HAKLPDGFVERV-SDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGS 309 (374)
Q Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~ 309 (374)
...+|+++.+++ ++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+
T Consensus 303 ~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv 382 (449)
T PLN02173 303 ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGV 382 (449)
T ss_pred hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceE
Confidence 235788888887 5788999999999999999999999999999999999999999999999999999999998889999
Q ss_pred EeecCC-CCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 310 QFFPDE-NGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 310 ~l~~~~-~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
.+..++ ++.++.++|+++|+++|.++ ++|+||+++++++++++.+||||++++++||+++.
T Consensus 383 ~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 383 RVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred EEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 997543 24579999999999999764 49999999999999999999999999999999875
No 7
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.2e-57 Score=440.49 Aligned_cols=348 Identities=27% Similarity=0.476 Sum_probs=275.8
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.++++++++++. .+++|||+|.+++|+.++|+++|||.+.|++++++....+.++|.+... ... ......
T Consensus 89 ~~~~~~~~~l~~~~-----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~~-~~~~~~ 160 (481)
T PLN02992 89 EAVPTLRSKIAEMH-----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD--IKE-EHTVQR 160 (481)
T ss_pred HhHHHHHHHHHhcC-----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccc--ccc-ccccCC
Confidence 35678888887752 4589999999999999999999999999999999887766665543211 110 000111
Q ss_pred ccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----------CCEEe
Q 017266 84 ELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----------PNILT 152 (374)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----------~~~~~ 152 (374)
. ...+||++.++..+++ ..+..+.. .....+......+.+++.+|+||+.+||....... ++++.
T Consensus 161 ~-~~~iPg~~~l~~~dlp-~~~~~~~~--~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~ 236 (481)
T PLN02992 161 K-PLAMPGCEPVRFEDTL-DAYLVPDE--PVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYP 236 (481)
T ss_pred C-CcccCCCCccCHHHhh-HhhcCCCc--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEE
Confidence 1 2347888888888877 32222211 23334445555667899999999999998766532 47999
Q ss_pred ecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC----
Q 017266 153 IGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN---- 228 (374)
Q Consensus 153 vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~---- 228 (374)
|||++... ... ..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||++++....
T Consensus 237 VGPl~~~~-~~~------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~ 309 (481)
T PLN02992 237 IGPLCRPI-QSS------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACS 309 (481)
T ss_pred ecCccCCc-CCC------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCccccccc
Confidence 99997631 111 2456799999999888999999999999999999999999999999999999743110
Q ss_pred -----------c-cccCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhh
Q 017266 229 -----------R-SHAKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQY 295 (374)
Q Consensus 229 -----------~-~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 295 (374)
. ....+|++|.+|+.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 310 ~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~ 389 (481)
T PLN02992 310 AYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQN 389 (481)
T ss_pred ccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhH
Confidence 0 02247889999998877766 9999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhc--cCCChHHHHHHHHHHHH
Q 017266 296 QNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLG--EGGSSFRNFESFISQLK 370 (374)
Q Consensus 296 ~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~--~~g~~~~~~~~~v~~~~ 370 (374)
.||+++++.+|+|+.++.. ++.++.++|.++|+++|.++ ++|++|+++++.+++++. +||||++++++||+++.
T Consensus 390 ~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~ 468 (481)
T PLN02992 390 MNAALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQ 468 (481)
T ss_pred HHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 9999996447999999752 13489999999999999764 599999999999999994 69999999999999886
Q ss_pred H
Q 017266 371 A 371 (374)
Q Consensus 371 ~ 371 (374)
.
T Consensus 469 ~ 469 (481)
T PLN02992 469 R 469 (481)
T ss_pred H
Confidence 5
No 8
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.7e-57 Score=441.70 Aligned_cols=359 Identities=25% Similarity=0.438 Sum_probs=276.4
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDE 84 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 84 (374)
+.+.++++++++ . .+++|||+|.+++|+.++|+++|||.+.|++++++.+..+++++......... ....+
T Consensus 100 ~~~~~~~~l~~~---~--~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~----~~~~~ 170 (477)
T PLN02863 100 LYAPLLSWFRSH---P--SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINP----DDQNE 170 (477)
T ss_pred hHHHHHHHHHhC---C--CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccc----ccccc
Confidence 455566655553 2 45799999999999999999999999999999999988887754211100000 00111
Q ss_pred c--ccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC------CCEEeeccc
Q 017266 85 L--ILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV------PNILTIGPL 156 (374)
Q Consensus 85 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~------~~~~~vGpl 156 (374)
. ...+||++.++..+++ .+...............+.......++.+++||+.+||+...+.. ++++.|||+
T Consensus 171 ~~~~~~iPg~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL 249 (477)
T PLN02863 171 ILSFSKIPNCPKYPWWQIS-SLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPI 249 (477)
T ss_pred ccccCCCCCCCCcChHhCc-hhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCC
Confidence 1 1246888888888887 333211111223333444444456778999999999998866432 579999999
Q ss_pred CCCCCCCC---c-cCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-ccc
Q 017266 157 LGSDHSEH---S-AINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN-RSH 231 (374)
Q Consensus 157 ~~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~-~~~ 231 (374)
+....... . ..+.+..+++|.+||+.+++++||||||||...++.+++.+++.+|++++++|||+++..... ...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~ 329 (477)
T PLN02863 250 LPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDY 329 (477)
T ss_pred cccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccch
Confidence 75321100 0 011111346799999999989999999999998999999999999999999999999853211 112
Q ss_pred cCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeE
Q 017266 232 AKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQ 310 (374)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~ 310 (374)
..+|+++.+++.+++.++ +|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.
T Consensus 330 ~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~ 409 (477)
T PLN02863 330 SNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVR 409 (477)
T ss_pred hhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEE
Confidence 357888888876655554 9999999999999999999999999999999999999999999999999998876899999
Q ss_pred eecCCCCCcCHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcC
Q 017266 311 FFPDENGIITRQEIYNRVKALL-NDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIG 373 (374)
Q Consensus 311 l~~~~~~~~~~~~l~~~i~~~l-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 373 (374)
+.....+.++.+++.++|+++| ++++||+||+++++.+++++.+||||.+++++||+++++.|
T Consensus 410 ~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 410 VCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred eccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 9653334578999999999999 67789999999999999999999999999999999999887
No 9
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-57 Score=437.96 Aligned_cols=349 Identities=26% Similarity=0.483 Sum_probs=277.1
Q ss_pred ccchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCC-eEEEeccchhhhHHhhhhhhhhhccccCCCCCCC
Q 017266 3 AVMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIA-RAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNAT 81 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 81 (374)
+.+.++++++|+++. .+++|||+|.+++|+.++|+++||| .+.|++++++....++++|... +..... ...
T Consensus 91 ~~~~~~~~~~l~~l~-----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~--~~~~~~-~~~ 162 (470)
T PLN03015 91 RAMKPAVRDAVKSMK-----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLD--TVVEGE-YVD 162 (470)
T ss_pred HhchHHHHHHHHhcC-----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhh--cccccc-cCC
Confidence 357888999988764 3489999999999999999999999 6888888888776777665432 111110 001
Q ss_pred CcccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----------CCE
Q 017266 82 SDELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----------PNI 150 (374)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----------~~~ 150 (374)
..+ ...+||++.++..+++ .+...+.. .....+....+.+.+++.+|+||+.+||+...+.. +++
T Consensus 163 ~~~-~~~vPg~p~l~~~dlp-~~~~~~~~--~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v 238 (470)
T PLN03015 163 IKE-PLKIPGCKPVGPKELM-ETMLDRSD--QQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPV 238 (470)
T ss_pred CCC-eeeCCCCCCCChHHCC-HhhcCCCc--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCce
Confidence 112 2347999999988888 33322211 11233335555677899999999999998755432 469
Q ss_pred EeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC---
Q 017266 151 LTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFM--- 227 (374)
Q Consensus 151 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~--- 227 (374)
+.|||++.. .... ..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++.+..
T Consensus 239 ~~VGPl~~~-~~~~------~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 311 (470)
T PLN03015 239 YPIGPIVRT-NVHV------EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLG 311 (470)
T ss_pred EEecCCCCC-cccc------cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccc
Confidence 999999852 1110 123479999999999999999999999999999999999999999999999974310
Q ss_pred -----Cc-cccCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHH
Q 017266 228 -----NR-SHAKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNY 300 (374)
Q Consensus 228 -----~~-~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 300 (374)
.. ..+.+|+++.+|+.+++.++ +|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||++
T Consensus 312 ~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~ 391 (470)
T PLN03015 312 ASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATL 391 (470)
T ss_pred cccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHH
Confidence 00 12258899999998888765 999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhcceeEeec-CCCCCcCHHHHHHHHHHHhcC-----hHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 301 ICDAWKVGSQFFP-DENGIITRQEIYNRVKALLND-----DGIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 301 v~~~~g~G~~l~~-~~~~~~~~~~l~~~i~~~l~~-----~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+++.||+|+.+.. .+++.+++++|+++|+++|.+ .++|+||++++++.++++++||||++++++|++++.
T Consensus 392 ~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 392 LTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 9777999999962 222358999999999999952 359999999999999999999999999999998864
No 10
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2e-57 Score=442.55 Aligned_cols=354 Identities=25% Similarity=0.432 Sum_probs=279.6
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.++++++|+++. ++++|||+|.+++|+.++|+++|||.+.|++++++.+..+.++|..... .. .......
T Consensus 95 ~~~~~l~~~L~~l~-----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~-~~~~~~~ 166 (480)
T PLN00164 95 LHAPHVRAAIAGLS-----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEE--VA-VEFEEME 166 (480)
T ss_pred hhhHHHHHHHHhcC-----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhccc--cc-CcccccC
Confidence 46777888887762 4579999999999999999999999999999999998888876543211 10 0011101
Q ss_pred ccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----------CCEEe
Q 017266 84 ELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----------PNILT 152 (374)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----------~~~~~ 152 (374)
. ...+||++.++..+++ .+...+.. .....+....+.+.+++.+++||+.+||+...... ++++.
T Consensus 167 ~-~~~iPGlp~l~~~dlp-~~~~~~~~--~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~ 242 (480)
T PLN00164 167 G-AVDVPGLPPVPASSLP-APVMDKKS--PNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYP 242 (480)
T ss_pred c-ceecCCCCCCChHHCC-chhcCCCc--HHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEE
Confidence 1 1236899888888888 43332221 11223333445567899999999999998755322 57999
Q ss_pred ecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC----
Q 017266 153 IGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN---- 228 (374)
Q Consensus 153 vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~---- 228 (374)
|||++.... .+ ..+..+.+|.+||+++++++||||||||...++.+++.+++.+|+.++++|||+++.....
T Consensus 243 vGPl~~~~~-~~---~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~ 318 (480)
T PLN00164 243 IGPVISLAF-TP---PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRH 318 (480)
T ss_pred eCCCccccc-cC---CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCccccccc
Confidence 999985211 11 1123567899999999999999999999988999999999999999999999999854210
Q ss_pred ----ccccCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHh
Q 017266 229 ----RSHAKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICD 303 (374)
Q Consensus 229 ----~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 303 (374)
.....+|+++.+++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++
T Consensus 319 ~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~ 398 (480)
T PLN00164 319 PTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVA 398 (480)
T ss_pred ccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHH
Confidence 011237889988888888877 999999999999999999999999999999999999999999999999998876
Q ss_pred HhcceeEeecCC--CCCcCHHHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcC
Q 017266 304 AWKVGSQFFPDE--NGIITRQEIYNRVKALLNDD-----GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIG 373 (374)
Q Consensus 304 ~~g~G~~l~~~~--~~~~~~~~l~~~i~~~l~~~-----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 373 (374)
.||+|+.+..++ ++.+++++|.++|+++|.++ .+|++|+++++.+++++.+||||++++++||++++...
T Consensus 399 ~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 399 DMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred HhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 689999986431 23579999999999999753 38999999999999999999999999999999998754
No 11
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.7e-57 Score=443.09 Aligned_cols=359 Identities=27% Similarity=0.459 Sum_probs=277.8
Q ss_pred chHHHHHHHHHhHhc-C--CCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCC
Q 017266 5 MPGCLKNFIEQVKES-N--DCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNAT 81 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~-~--~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 81 (374)
+.+.+++.++++... . +.++.+|||+|.+++|+.++|+++|||.+.|++++++.+..+.++|.....+-.+..+...
T Consensus 90 ~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (481)
T PLN02554 90 QKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELED 169 (481)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCC
Confidence 456677777766321 0 0133589999999999999999999999999999999988888766543211111000111
Q ss_pred CcccccccccCC-CCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhc-------cCCCEEee
Q 017266 82 SDELILLSEDTL-PWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACD-------LVPNILTI 153 (374)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-------~~~~~~~v 153 (374)
... ...+|+++ +++..+++ .+.... .....+......+.+++.+++||+.+||..... ..++++.|
T Consensus 170 ~~~-~v~iPgl~~pl~~~dlp-~~~~~~----~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~v 243 (481)
T PLN02554 170 SEV-ELDVPSLTRPYPVKCLP-SVLLSK----EWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPV 243 (481)
T ss_pred CCc-eeECCCCCCCCCHHHCC-CcccCH----HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEe
Confidence 111 22478884 67777877 333321 223444555666778999999999999986443 34789999
Q ss_pred cccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-----
Q 017266 154 GPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN----- 228 (374)
Q Consensus 154 Gpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~----- 228 (374)
||++....... ....+.+.+|.+||+++++++||||||||+..++.+++++++.+|+.++++|||+++.....
T Consensus 244 Gpl~~~~~~~~--~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~ 321 (481)
T PLN02554 244 GPVLHLENSGD--DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEP 321 (481)
T ss_pred CCCcccccccc--ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccc
Confidence 99943121111 00013456899999999888999999999988999999999999999999999999853100
Q ss_pred -----ccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHh
Q 017266 229 -----RSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICD 303 (374)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 303 (374)
.....+|+++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++
T Consensus 322 ~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~ 401 (481)
T PLN02554 322 PGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVE 401 (481)
T ss_pred cccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHH
Confidence 011235889988899999999999999999999999999999999999999999999999999999999966444
Q ss_pred HhcceeEeecC--------CCCCcCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 304 AWKVGSQFFPD--------ENGIITRQEIYNRVKALLN-DDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 304 ~~g~G~~l~~~--------~~~~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
.+|+|+.+... +++.+++++|+++|+++|+ |++||+||+++++++++++.+||||+.++++||+++++
T Consensus 402 ~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 402 ELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Confidence 47999999631 1234899999999999996 78899999999999999999999999999999999885
No 12
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.4e-57 Score=437.89 Aligned_cols=344 Identities=29% Similarity=0.493 Sum_probs=271.3
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.++++++|+++. .+ ++++|||+|.+++|+.++|+++|||.+.|++++++.+..+.++|..... .+.. .. .+
T Consensus 95 ~~~~~~~~~l~~l~-~~--~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~~~-~~-~~ 167 (451)
T PLN03004 95 FSNPSVHRTLFSLS-RN--FNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDET--TPGK-NL-KD 167 (451)
T ss_pred hhhHHHHHHHHhcC-CC--CCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccc--cccc-cc-cc
Confidence 46778888888873 22 4579999999999999999999999999999999988888776542111 0000 00 11
Q ss_pred ccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC------CCEEeecccC
Q 017266 84 ELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV------PNILTIGPLL 157 (374)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~------~~~~~vGpl~ 157 (374)
.....+||++.++..+++ .+...+. ......+......+.+++.+|+||+.+||+...+.. ++++.|||++
T Consensus 168 ~~~v~iPg~p~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~ 244 (451)
T PLN03004 168 IPTVHIPGVPPMKGSDMP-KAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLI 244 (451)
T ss_pred CCeecCCCCCCCChHHCc-hhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeec
Confidence 112357899988888888 4433222 123344445555667889999999999998755422 5799999997
Q ss_pred CCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-c---ccc-
Q 017266 158 GSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN-R---SHA- 232 (374)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~-~---~~~- 232 (374)
....... ... ..+.+|.+|||++++++||||||||...++.+++++++.+|+.++++|||+++..... . ...
T Consensus 245 ~~~~~~~--~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~ 321 (451)
T PLN03004 245 VNGRIED--RND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKS 321 (451)
T ss_pred cCccccc--ccc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhh
Confidence 5211110 111 1245699999999999999999999999999999999999999999999999953110 0 112
Q ss_pred CCCchhhhhcCCCcEE-EeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEe
Q 017266 233 KLPDGFVERVSDRGKF-VEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQF 311 (374)
Q Consensus 233 ~~~~~~~~~~~~~~~~-~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l 311 (374)
.+|++|.+|+.+++.+ .+|+||.+||+|+++|+|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+
T Consensus 322 ~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 322 LLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred hCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 2788999998776655 599999999999999999999999999999999999999999999999999998768999999
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHH
Q 017266 312 FPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFR 360 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 360 (374)
+..+.+.++.++|+++|+++|+|++||++|+++++..+.++++||||++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 7543345899999999999999999999999999999999999999864
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.1e-57 Score=440.46 Aligned_cols=358 Identities=27% Similarity=0.452 Sum_probs=276.8
Q ss_pred cchHHHHHHHHHhHhcC---CCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCC
Q 017266 4 VMPGCLKNFIEQVKESN---DCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNA 80 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~---~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 80 (374)
.+.+++++.++++..+. +..+++|||+|.+++|+.++|+++|||.+.|++++++.+..++++|.... .... ...
T Consensus 95 ~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~--~~~~-~~~ 171 (475)
T PLN02167 95 KMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHR--KTAS-EFD 171 (475)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhcc--cccc-ccc
Confidence 45667778887764211 00246999999999999999999999999999999998888777654221 1110 000
Q ss_pred C-CcccccccccCC-CCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhcc-------CCCEE
Q 017266 81 T-SDELILLSEDTL-PWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDL-------VPNIL 151 (374)
Q Consensus 81 ~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-------~~~~~ 151 (374)
. .......+||++ .++..+++ .+...+.. .+.+....+.+.+++.+|+||+.+||+.+.+. .|+++
T Consensus 172 ~~~~~~~~~iPgl~~~l~~~dlp-~~~~~~~~----~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~ 246 (475)
T PLN02167 172 LSSGEEELPIPGFVNSVPTKVLP-PGLFMKES----YEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVY 246 (475)
T ss_pred cCCCCCeeECCCCCCCCChhhCc-hhhhCcch----HHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeE
Confidence 0 001112468884 57777776 32222211 22334445556789999999999999876543 26899
Q ss_pred eecccCCCCCCCCccCCCC-CCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC--C
Q 017266 152 TIGPLLGSDHSEHSAINFW-PEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFM--N 228 (374)
Q Consensus 152 ~vGpl~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~--~ 228 (374)
.|||+++...... ...+ ..+.+|.+||+.+++++||||||||...++.+++.+++.+|+.++++|||+++.+.. .
T Consensus 247 ~vGpl~~~~~~~~--~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~ 324 (475)
T PLN02167 247 PVGPILSLKDRTS--PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYA 324 (475)
T ss_pred EeccccccccccC--CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCccccc
Confidence 9999986321100 0111 123579999999998999999999998889999999999999999999999985411 0
Q ss_pred ccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcce
Q 017266 229 RSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVG 308 (374)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 308 (374)
.....+|+++.+++.+++++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|
T Consensus 325 ~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g 404 (475)
T PLN02167 325 SPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLA 404 (475)
T ss_pred chhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCee
Confidence 11234788998899999999999999999999999999999999999999999999999999999999998755558999
Q ss_pred eEeecC----CCCCcCHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 309 SQFFPD----ENGIITRQEIYNRVKALLNDD-GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 309 ~~l~~~----~~~~~~~~~l~~~i~~~l~~~-~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
+.+... .++.+++++|+++|+++|.++ +||+||+++++.+++++.+||||++++++||++++.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 405 VELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred EEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 998642 123479999999999999765 799999999999999999999999999999999874
No 14
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.8e-56 Score=433.19 Aligned_cols=347 Identities=30% Similarity=0.540 Sum_probs=268.2
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDE 84 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 84 (374)
+.+.+++++++ .++||||+|.+++|+.++|+++|||.+.|++.+++.+..+.+++.. .+..+.. ....
T Consensus 91 ~~~~l~~~l~~-------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~~~~~~---~~~~ 158 (456)
T PLN02210 91 GAKNLSKIIEE-------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TNSFPDL---EDLN 158 (456)
T ss_pred hhHHHHHHHhc-------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cCCCCcc---cccC
Confidence 44555555544 3499999999999999999999999999999999887776654321 1111110 0001
Q ss_pred cccccccCCCCccccccccCCCCCchhHHHHHHHH-HHHHhccCccEEEEcCCccCCcchhccC---CCEEeecccCCC-
Q 017266 85 LILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATS-AVAQSLKISNWILCNSFYELDSPACDLV---PNILTIGPLLGS- 159 (374)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ns~~~le~~~~~~~---~~~~~vGpl~~~- 159 (374)
....+|+++.++..+++ .++.... ...+.... +..+....++.+++||+.+||....+.. +++++|||++..
T Consensus 159 ~~~~~Pgl~~~~~~dl~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~ 235 (456)
T PLN02210 159 QTVELPALPLLEVRDLP-SFMLPSG--GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPF 235 (456)
T ss_pred CeeeCCCCCCCChhhCC-hhhhcCC--chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchh
Confidence 11246888878888877 3332211 11122222 2333456789999999999998866553 589999999752
Q ss_pred ---CCCCC--c--cCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCcccc
Q 017266 160 ---DHSEH--S--AINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHA 232 (374)
Q Consensus 160 ---~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~ 232 (374)
..... . ....|..+.+|.+||+.+++++||||||||....+.+++++++.+|+.++++|||+++... ..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~----~~ 311 (456)
T PLN02210 236 LLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKE----KA 311 (456)
T ss_pred hcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCc----cc
Confidence 11100 0 0123455678999999999889999999999888999999999999999999999998541 11
Q ss_pred CCCchhhhhc-CCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEe
Q 017266 233 KLPDGFVERV-SDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQF 311 (374)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l 311 (374)
..+..+.++. ++++.+++|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.+|+|+.+
T Consensus 312 ~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l 391 (456)
T PLN02210 312 QNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRM 391 (456)
T ss_pred cchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEE
Confidence 2234455555 478888899999999999999999999999999999999999999999999999999999867999999
Q ss_pred ecCC-CCCcCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 312 FPDE-NGIITRQEIYNRVKALLNDDG---IKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 312 ~~~~-~~~~~~~~l~~~i~~~l~~~~---~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
...+ ++.++.++|+++|+++|.+++ +|+||+++++.+++++++||||++++++||++++
T Consensus 392 ~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 392 RNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred eccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 7532 345899999999999998764 9999999999999999999999999999999875
No 15
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.8e-55 Score=421.05 Aligned_cols=350 Identities=29% Similarity=0.460 Sum_probs=263.4
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.+.++++++++ +++|||+|.+++|+.++|+++|||.+.|++++++....+.+.+.....+... ...
T Consensus 97 ~~~~~~~~~l~~~-------~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~-----~~~ 164 (472)
T PLN02670 97 LLEPPLTTFLETS-------KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLR-----STA 164 (472)
T ss_pred HhHHHHHHHHHhC-------CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCC-----Ccc
Confidence 3556666666553 3899999999999999999999999999999998877765443222222211 111
Q ss_pred ccccccccC----C--CCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----CCEEe
Q 017266 84 ELILLSEDT----L--PWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----PNILT 152 (374)
Q Consensus 84 ~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----~~~~~ 152 (374)
+....+|++ + .++..+++ .+.............+.+....+.+++.+|+||+.+||+.+.+.. ++++.
T Consensus 165 ~~~~~~p~~~P~~~~~~~~~~dlp-~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~ 243 (472)
T PLN02670 165 EDFTVVPPWVPFESNIVFRYHEVT-KYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIP 243 (472)
T ss_pred ccccCCCCcCCCCccccccHHHhh-HHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEE
Confidence 111113333 2 13445555 333211111111222334444566899999999999998866543 57999
Q ss_pred ecccCCC-CCCCCccCCCC-CCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC--C
Q 017266 153 IGPLLGS-DHSEHSAINFW-PEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFM--N 228 (374)
Q Consensus 153 vGpl~~~-~~~~~~~~~~~-~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~--~ 228 (374)
|||+... .....+ .... ...++|.+|||++++++||||||||...++.+++.+++.+|+.++++|||+++.... .
T Consensus 244 VGPl~~~~~~~~~~-~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 322 (472)
T PLN02670 244 IGFLPPVIEDDEED-DTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQ 322 (472)
T ss_pred EecCCccccccccc-cccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 9999752 111110 0000 112569999999988899999999999999999999999999999999999985311 1
Q ss_pred ccccCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcc
Q 017266 229 RSHAKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKV 307 (374)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 307 (374)
.....+|++|.+++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++ +|+
T Consensus 323 ~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~ 401 (472)
T PLN02670 323 NALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKL 401 (472)
T ss_pred chhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCe
Confidence 112358899999998888886 999999999999999999999999999999999999999999999999999988 699
Q ss_pred eeEeecCC-CCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 308 GSQFFPDE-NGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 308 G~~l~~~~-~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
|+.+...+ ++.++.++|+++|+++|.++ +||+||+++++.+++ .+...+.++++++++++.
T Consensus 402 Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 402 GLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLREN 466 (472)
T ss_pred eEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHHh
Confidence 99997532 34589999999999999876 699999999999998 567788999999998764
No 16
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.3e-54 Score=422.71 Aligned_cols=350 Identities=27% Similarity=0.483 Sum_probs=269.7
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCC-C
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNAT-S 82 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~ 82 (374)
.+.+.++++++++. .++||||+|.+++|+..+|+++|||.+.|+++++.....+.+.+.+...+..+.. ... .
T Consensus 93 ~~~~~~~~~l~~~~-----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~ 166 (459)
T PLN02448 93 KMEAPFEQLLDRLE-----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVE-LSESG 166 (459)
T ss_pred HhHHHHHHHHHhcC-----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCc-ccccc
Confidence 45667777777763 3489999999999999999999999999999999877776665433221111100 000 1
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhcc-----CCCEEeecccC
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDL-----VPNILTIGPLL 157 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-----~~~~~~vGpl~ 157 (374)
+.....+|+++.++..+++ .+..... ....+.+......+.+++.+++||+.+||+.+.+. .++++.|||+.
T Consensus 167 ~~~~~~iPg~~~l~~~dlp-~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~ 243 (459)
T PLN02448 167 EERVDYIPGLSSTRLSDLP-PIFHGNS--RRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSI 243 (459)
T ss_pred CCccccCCCCCCCChHHCc-hhhcCCc--hHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcc
Confidence 1112246888877777777 3332221 12233444555556678999999999999874432 35899999997
Q ss_pred CCCCCCCccCC--CCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCC
Q 017266 158 GSDHSEHSAIN--FWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLP 235 (374)
Q Consensus 158 ~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~ 235 (374)
........... ....+.++.+|++.++++++|||||||....+.+++++++.+|+..+++|||+++.. .
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~---------~ 314 (459)
T PLN02448 244 PYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE---------A 314 (459)
T ss_pred cccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc---------h
Confidence 53111000000 111234799999999888999999999988889999999999999999999988643 1
Q ss_pred chhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC-
Q 017266 236 DGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD- 314 (374)
Q Consensus 236 ~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~- 314 (374)
..+.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+...
T Consensus 315 ~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 315 SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc
Confidence 2344444678889999999999999999999999999999999999999999999999999999999878999998632
Q ss_pred -CCCCcCHHHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 315 -ENGIITRQEIYNRVKALLNDD-----GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 315 -~~~~~~~~~l~~~i~~~l~~~-----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
+++.+++++|+++|+++|+++ +||+||+++++++++++.+||||.+++++||+++++
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 123479999999999999763 599999999999999999999999999999999874
No 17
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-54 Score=415.41 Aligned_cols=333 Identities=26% Similarity=0.452 Sum_probs=259.3
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDE 84 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 84 (374)
+.++|+++|+++ ++||||+|. ++|+.++|+++|||.+.|++++++....+.+ + .+.++
T Consensus 96 ~~~~~~~~l~~~-------~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~~--------- 153 (453)
T PLN02764 96 TRDQVEVVVRAV-------EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGELG--------- 153 (453)
T ss_pred hHHHHHHHHHhC-------CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccCC---------
Confidence 456677777663 379999995 8899999999999999999999987766642 1 11110
Q ss_pred cccccccCCC----CccccccccCCC-CC-chhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----CCEEee
Q 017266 85 LILLSEDTLP----WKKNEYIWSFPS-QP-DVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----PNILTI 153 (374)
Q Consensus 85 ~~~~~~~~~~----~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----~~~~~v 153 (374)
...||+|. ++..+++. +.. .+ ...+..........+.+.+++.+++||+.+||+.+.+.. ++++.|
T Consensus 154 --~~~pglp~~~v~l~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~V 230 (453)
T PLN02764 154 --VPPPGYPSSKVLLRKQDAYT-MKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLT 230 (453)
T ss_pred --CCCCCCCCCcccCcHhhCcc-hhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEe
Confidence 11266662 44455552 211 01 111112222233335567889999999999998866543 579999
Q ss_pred cccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-cccc
Q 017266 154 GPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN-RSHA 232 (374)
Q Consensus 154 Gpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~-~~~~ 232 (374)
||++... ... ...+.+|.+|||++++++||||||||...++.+++.+++.+|+..+.+|+|+++..... ....
T Consensus 231 GPL~~~~-~~~-----~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~ 304 (453)
T PLN02764 231 GPVFPEP-DKT-----RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQE 304 (453)
T ss_pred ccCccCc-ccc-----ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhh
Confidence 9997632 110 01356799999999999999999999988999999999999999999999999853211 1234
Q ss_pred CCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEe
Q 017266 233 KLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQF 311 (374)
Q Consensus 233 ~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l 311 (374)
.+|++|.+++.+++.++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+
T Consensus 305 ~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~ 384 (453)
T PLN02764 305 ALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEV 384 (453)
T ss_pred hCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEe
Confidence 58999999998888877 99999999999999999999999999999999999999999999999999997668999988
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcChH-----HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 312 FPDENGIITRQEIYNRVKALLNDDG-----IKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~~~~-----~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
..++.+.++.++|+++|+++|++++ +|++|+++++.+++ +|||.+++++||+++.+.
T Consensus 385 ~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 385 AREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDL 446 (453)
T ss_pred ccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHh
Confidence 5432234899999999999997642 99999999998866 899999999999999874
No 18
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-54 Score=419.96 Aligned_cols=352 Identities=28% Similarity=0.481 Sum_probs=262.4
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDE 84 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 84 (374)
+.+.++++|++. + .+++|||+|.+++|+.++|+++|||.+.|++++++....++++.... +..+ .....
T Consensus 105 l~~~l~~lL~~~---~--~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~--~~~~---~~~~~- 173 (491)
T PLN02534 105 LQQPLERFLEQA---K--PPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHN--AHLS---VSSDS- 173 (491)
T ss_pred hHHHHHHHHHhc---C--CCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhc--cccc---CCCCC-
Confidence 445666666543 2 46899999999999999999999999999999998776554321111 1111 11111
Q ss_pred cccccccCCC---CccccccccCCCCCchhHHHHHHHHHHHHh-ccCccEEEEcCCccCCcchhcc-----CCCEEeecc
Q 017266 85 LILLSEDTLP---WKKNEYIWSFPSQPDVQKLYFEATSAVAQS-LKISNWILCNSFYELDSPACDL-----VPNILTIGP 155 (374)
Q Consensus 85 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ns~~~le~~~~~~-----~~~~~~vGp 155 (374)
....+|+++. ++..+++ .+.......+.+ ...... ..+++.+++||+.+||+.+.+. .++++.|||
T Consensus 174 ~~~~iPg~p~~~~l~~~dlp-~~~~~~~~~~~~----~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGP 248 (491)
T PLN02534 174 EPFVVPGMPQSIEITRAQLP-GAFVSLPDLDDV----RNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGP 248 (491)
T ss_pred ceeecCCCCccccccHHHCC-hhhcCcccHHHH----HHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECc
Confidence 1224678774 6666666 322111112222 222222 2367899999999999875542 268999999
Q ss_pred cCCCCCCCCcc---CCCCC-CCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC-Ccc
Q 017266 156 LLGSDHSEHSA---INFWP-EDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFM-NRS 230 (374)
Q Consensus 156 l~~~~~~~~~~---~~~~~-~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~-~~~ 230 (374)
++.......+. +..+. .+.+|.+|||.+++++||||||||......+++.+++.+|+.++++|||+++.+.. ...
T Consensus 249 L~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~ 328 (491)
T PLN02534 249 VSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSEL 328 (491)
T ss_pred ccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccch
Confidence 97521111000 11111 23569999999999999999999999999999999999999999999999985311 011
Q ss_pred c-cCCCchhhhhcCCCcE-EEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcce
Q 017266 231 H-AKLPDGFVERVSDRGK-FVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVG 308 (374)
Q Consensus 231 ~-~~~~~~~~~~~~~~~~-~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 308 (374)
. ..+|++|.+++.+++. +.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|
T Consensus 329 ~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vG 408 (491)
T PLN02534 329 EEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIG 408 (491)
T ss_pred hhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcce
Confidence 1 1357888877655445 4599999999999999999999999999999999999999999999999999999889999
Q ss_pred eEeecC-------CC--C-CcCHHHHHHHHHHHhc--C---hHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 309 SQFFPD-------EN--G-IITRQEIYNRVKALLN--D---DGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 309 ~~l~~~-------~~--~-~~~~~~l~~~i~~~l~--~---~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
+.+... ++ + .+++++|+++|+++|. + +++|+||+++++.+++++.+||||++++++||+++++.
T Consensus 409 v~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 409 VRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred EEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 988521 11 2 4899999999999996 2 35999999999999999999999999999999999764
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.5e-54 Score=417.42 Aligned_cols=317 Identities=23% Similarity=0.460 Sum_probs=249.3
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCC----Ccccc
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLP----WKKNE 99 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (374)
++||||+| +++|+.++|+++|||.+.|++++++... +.+++. +..+ ..+|++|. ++..+
T Consensus 107 ~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~~-----------~~~pglp~~~~~~~~~~ 169 (442)
T PLN02208 107 RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKLG-----------VPPPGYPSSKVLFREND 169 (442)
T ss_pred CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----cccC-----------CCCCCCCCcccccCHHH
Confidence 48999999 5789999999999999999999998654 444321 1100 01366664 34455
Q ss_pred ccccCCCCCchhHHHHHHHHH-HHHhccCccEEEEcCCccCCcchhc-----cCCCEEeecccCCCCCCCCccCCCCCCC
Q 017266 100 YIWSFPSQPDVQKLYFEATSA-VAQSLKISNWILCNSFYELDSPACD-----LVPNILTIGPLLGSDHSEHSAINFWPED 173 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ns~~~le~~~~~-----~~~~~~~vGpl~~~~~~~~~~~~~~~~~ 173 (374)
++ .+... ...+..+.. ..+...+++.+++||+.+||+.+.+ +.++++.|||+++.. +.+ .+.+
T Consensus 170 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~-~~~-----~~~~ 238 (442)
T PLN02208 170 AH-ALATL----SIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP-DTS-----KPLE 238 (442)
T ss_pred cC-ccccc----chHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc-CCC-----CCCH
Confidence 55 22111 122222222 2235568999999999999987654 347999999998732 110 1356
Q ss_pred ccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCC-CccccCCCchhhhhcCCCcEEE-ee
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFM-NRSHAKLPDGFVERVSDRGKFV-EW 251 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (374)
.+|.+|||.+++++||||||||...++.+++.+++.+++..+.+++|+++.+.. ......+|++|.+++.+++.++ +|
T Consensus 239 ~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W 318 (442)
T PLN02208 239 EQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGW 318 (442)
T ss_pred HHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeecc
Confidence 789999999998899999999999899999999999998889999999985411 1112358889988887666655 99
Q ss_pred cChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 252 APQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 252 ~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+...+++.+++++|+++|+++
T Consensus 319 ~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~ 398 (442)
T PLN02208 319 VQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSV 398 (442)
T ss_pred CCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998876799999976544568999999999999
Q ss_pred hcChH-----HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 332 LNDDG-----IKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 332 l~~~~-----~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
|++++ +|++|+++++.+.+ +|||.+++++||+++++.
T Consensus 399 m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 399 MDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQEY 440 (442)
T ss_pred hcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHh
Confidence 97653 99999999999754 789999999999999764
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=9.5e-54 Score=418.58 Aligned_cols=338 Identities=30% Similarity=0.493 Sum_probs=255.6
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCC---Cccccc
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLP---WKKNEY 100 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 100 (374)
++||||+|.+++|+.++|+++|||.+.|++++++....++.+........ ...... ...+|++|. ++..++
T Consensus 122 ~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~pg~p~~~~~~~~~~ 195 (482)
T PLN03007 122 RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKK-----VASSSE-PFVIPDLPGDIVITEEQI 195 (482)
T ss_pred CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccc-----cCCCCc-eeeCCCCCCccccCHHhc
Confidence 58999999999999999999999999999999887665543221111000 011011 112566652 222333
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----CCEEeecccCCCCCCCC----ccCCCCC
Q 017266 101 IWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----PNILTIGPLLGSDHSEH----SAINFWP 171 (374)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----~~~~~vGpl~~~~~~~~----~~~~~~~ 171 (374)
+ .. .....+..+.....+.+.+++.+++||+++||++..+.. .++++|||+........ .....+.
T Consensus 196 ~-~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~ 270 (482)
T PLN03007 196 N-DA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANI 270 (482)
T ss_pred C-CC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCcccc
Confidence 3 11 111223333344445667899999999999998866544 46999999865321100 0011112
Q ss_pred CCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-ccccCCCchhhhhcCCC-cEEE
Q 017266 172 EDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN-RSHAKLPDGFVERVSDR-GKFV 249 (374)
Q Consensus 172 ~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~ 249 (374)
.+.+|.+||+.+++++||||||||....+.+++.+++.+|+.++++|||+++..... .....+|+++.++..++ +++.
T Consensus 271 ~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~ 350 (482)
T PLN03007 271 DEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIR 350 (482)
T ss_pred chhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEe
Confidence 356799999999889999999999988889999999999999999999999864211 11234788888877544 4555
Q ss_pred eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC-----CCCCcCHHHH
Q 017266 250 EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD-----ENGIITRQEI 324 (374)
Q Consensus 250 ~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~-----~~~~~~~~~l 324 (374)
+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+++|+.+... +.+.++.++|
T Consensus 351 ~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l 430 (482)
T PLN03007 351 GWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKV 430 (482)
T ss_pred cCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHH
Confidence 99999999999999999999999999999999999999999999999999988766777776321 1234899999
Q ss_pred HHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 325 YNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 325 ~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
+++|+++|.++ +||+||+++++.+++++++||||++++++||+++.+.
T Consensus 431 ~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 431 EKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 99999999887 7999999999999999999999999999999998764
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=4.2e-52 Score=400.83 Aligned_cols=318 Identities=27% Similarity=0.461 Sum_probs=246.4
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCC----Ccccc
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLP----WKKNE 99 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 99 (374)
++||||+|. ++|+.++|+++|||.+.|++++++....+.+ +.. . .. . ..|++|. ++..+
T Consensus 107 ~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~---~-~~---~--------~~pg~p~~~~~~~~~~ 169 (446)
T PLN00414 107 KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRA---E-LG---F--------PPPDYPLSKVALRGHD 169 (446)
T ss_pred CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHh---h-cC---C--------CCCCCCCCcCcCchhh
Confidence 479999995 8899999999999999999999988776655 210 0 00 0 1244443 21121
Q ss_pred ccc-cCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccC-----CCEEeecccCCCCCCCCccCCCCCCC
Q 017266 100 YIW-SFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLV-----PNILTIGPLLGSDHSEHSAINFWPED 173 (374)
Q Consensus 100 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~-----~~~~~vGpl~~~~~~~~~~~~~~~~~ 173 (374)
... .+.. . ....+....+.+.+++.+++||+.+||+.+.+.. ++++.|||+..... ..+ + ...+
T Consensus 170 ~~~~~~~~-~-----~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~-~~~-~--~~~~ 239 (446)
T PLN00414 170 ANVCSLFA-N-----SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQ-NKS-G--KPLE 239 (446)
T ss_pred cccchhhc-c-----cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcc-ccc-C--cccH
Confidence 110 1111 1 1122334445567899999999999998866533 46999999975321 110 0 1124
Q ss_pred ccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-ccccCCCchhhhhcCCCcEEE-ee
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN-RSHAKLPDGFVERVSDRGKFV-EW 251 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 251 (374)
.+|.+|||.+++++||||||||...++.+++.+++.+|+.++.+|+|+++..... .....+|++|.+++.+++.++ +|
T Consensus 240 ~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w 319 (446)
T PLN00414 240 DRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGW 319 (446)
T ss_pred HHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEecc
Confidence 5699999999999999999999999999999999999999999999999864211 112358999999999999887 89
Q ss_pred cChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 252 APQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 252 ~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+...+++.++.++|+++++++
T Consensus 320 ~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~ 399 (446)
T PLN00414 320 VEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSV 399 (446)
T ss_pred CCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999766899999975433458999999999999
Q ss_pred hcChH-----HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 332 LNDDG-----IKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 332 l~~~~-----~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
|.+++ +|++|+++++.+.+ +||+| ..+++||+++++.
T Consensus 400 m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 400 MDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALENE 441 (446)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHHh
Confidence 97642 99999999999744 57734 3489999998764
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=369.25 Aligned_cols=317 Identities=15% Similarity=0.201 Sum_probs=232.5
Q ss_pred CcccEEEeCCchhHHHHHHHHh-CCCeEEEeccchhhhHHhh-h-hh---hhhhc---cccCCCCCCCCcccccccccCC
Q 017266 23 EQISCVITDVTVGWALEIAEQM-GIARAAVVTFAPAYLPLVL-H-IP---KLVDA---GILDSTGNATSDELILLSEDTL 93 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~l-giP~v~~~~~~~~~~~~~~-~-~p---~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 93 (374)
.+||+||+|.+..|+..+|+++ ++|.|.+++.......... . .| +..+. +..+.|++..|..+....-
T Consensus 135 ~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~--- 211 (507)
T PHA03392 135 NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTEL--- 211 (507)
T ss_pred CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHH---
Confidence 4599999999989999999999 9999888775543211110 0 11 11110 1112222222222111000
Q ss_pred CCccccccccCCCCCchhHHHHHHHHH----HHHhccCccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCC
Q 017266 94 PWKKNEYIWSFPSQPDVQKLYFEATSA----VAQSLKISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINF 169 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~ 169 (374)
.....+.... +...+...+.+.. ..+..++.+++|+|+++.||++ +|++|++++|||++....+..
T Consensus 212 ---~~~~~~~~~~-~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-rp~~p~v~~vGgi~~~~~~~~----- 281 (507)
T PHA03392 212 ---RLYNEFSLLA-DEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-RPVPPSVQYLGGLHLHKKPPQ----- 281 (507)
T ss_pred ---HHHHHHHHhh-HHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-CCCCCCeeeecccccCCCCCC-----
Confidence 0000001111 1222222222211 2334458899999999999998 899999999999987421221
Q ss_pred CCCCccchhhhhcCCCCceEEEeecccc---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCc
Q 017266 170 WPEDSTCLSWLDKQAIGSVIYVAFGSAA---VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRG 246 (374)
Q Consensus 170 ~~~~~~~~~~l~~~~~~~vv~vs~GS~~---~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (374)
++++++.+|++.+++ ++|||||||.. .++.+.++.+++++++.+++|||+++... .+.+ .++|+
T Consensus 282 -~l~~~l~~fl~~~~~-g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-------~~~~----~p~Nv 348 (507)
T PHA03392 282 -PLDDYLEEFLNNSTN-GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-------EAIN----LPANV 348 (507)
T ss_pred -CCCHHHHHHHhcCCC-cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-------Cccc----CCCce
Confidence 478899999998754 59999999984 46789999999999999999999998541 1112 26788
Q ss_pred EEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHH
Q 017266 247 KFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYN 326 (374)
Q Consensus 247 ~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~ 326 (374)
++.+|+||.++|+|+++++||||||+||++||+++|||||++|+++||+.||+++++. |+|+.++..+ ++.++|.+
T Consensus 349 ~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~~---~t~~~l~~ 424 (507)
T PHA03392 349 LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTVT---VSAAQLVL 424 (507)
T ss_pred EEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccCC---cCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999995 9999999877 99999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 327 RVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 327 ~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
+|+++++|++|++||+++++.+++. .-+..+.....++++.+.
T Consensus 425 ai~~vl~~~~y~~~a~~ls~~~~~~---p~~~~~~av~~iE~v~r~ 467 (507)
T PHA03392 425 AIVDVIENPKYRKNLKELRHLIRHQ---PMTPLHKAIWYTEHVIRN 467 (507)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999984 333555666777776654
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=3.5e-49 Score=391.71 Aligned_cols=316 Identities=26% Similarity=0.387 Sum_probs=198.7
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHh---------hhhhhhhhccccCCCCCCCCcccccccccCCC
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLV---------LHIPKLVDAGILDSTGNATSDELILLSEDTLP 94 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~---------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (374)
+||++|+|.+.+|+..+|+.+|+|.+.+.++........ .++|.... +..+.|++..|..+.........
T Consensus 119 ~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s-~~~~~msf~~Ri~N~l~~~~~~~ 197 (500)
T PF00201_consen 119 KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFS-DFSDRMSFWQRIKNFLFYLYFRF 197 (500)
T ss_dssp HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCC-CSGTTSSSST--TTSHHHHHHHH
T ss_pred ccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhccccc-cCCCccchhhhhhhhhhhhhhcc
Confidence 399999999999999999999999988655433221110 01111111 11122222222211100000000
Q ss_pred CccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCc
Q 017266 95 WKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDS 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~ 174 (374)
+ ...+. ..................+.+.+++++++|+++.+++| +|.+|++++||+++.. ++. +++.
T Consensus 198 ~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-rp~~p~v~~vGgl~~~-~~~-------~l~~ 264 (500)
T PF00201_consen 198 I-FRYFF---SPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-RPLLPNVVEVGGLHIK-PAK-------PLPE 264 (500)
T ss_dssp H-HHHGG---GS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE-----HHHHCTSTTGCGC-S------------TCHH
T ss_pred c-cccch---hhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-cchhhcccccCccccc-ccc-------cccc
Confidence 0 00000 00000000000000111233446788999999999998 8999999999999874 333 3788
Q ss_pred cchhhhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC
Q 017266 175 TCLSWLDKQAIGSVIYVAFGSAA-VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP 253 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (374)
++.+|++...++++|||||||.. .++.+..++++++|++.+++|||+++.. .+..+ ++|+++++|+|
T Consensus 265 ~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~--------~~~~l----~~n~~~~~W~P 332 (500)
T PF00201_consen 265 ELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE--------PPENL----PKNVLIVKWLP 332 (500)
T ss_dssp HHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS--------HGCHH----HTTEEEESS--
T ss_pred ccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc--------ccccc----cceEEEecccc
Confidence 89999998556679999999985 4566668899999999999999999853 11222 57789999999
Q ss_pred hHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 254 QEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 254 q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
|.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++. |+|+.++..+ +|.++|.++|+++|+
T Consensus 333 Q~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~~~---~~~~~l~~ai~~vl~ 408 (500)
T PF00201_consen 333 QNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLDKND---LTEEELRAAIREVLE 408 (500)
T ss_dssp HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEGGGC----SHHHHHHHHHHHHH
T ss_pred chhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEEecC---CcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999995 9999999887 999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 334 DDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 334 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
|++|++||+++++++++. .-+..+.+...++++.+.
T Consensus 409 ~~~y~~~a~~ls~~~~~~---p~~p~~~~~~~ie~v~~~ 444 (500)
T PF00201_consen 409 NPSYKENAKRLSSLFRDR---PISPLERAVWWIEYVARH 444 (500)
T ss_dssp SHHHHHHHHHHHHTTT-----------------------
T ss_pred hhHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHHHHhc
Confidence 999999999999999985 233445555566655543
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.1e-38 Score=313.13 Aligned_cols=308 Identities=29% Similarity=0.440 Sum_probs=211.6
Q ss_pred cccEEEeCCchhHHHHHHHHhC-CCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCCCccccccc
Q 017266 24 QISCVITDVTVGWALEIAEQMG-IARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLPWKKNEYIW 102 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (374)
+||++|+|.+..|...+|...+ +|..++.+.++.......+.+.. .++............+......+....++.
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~----~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~ 189 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLS----YVPSPFSLSSGDDMSFPERVPNLIKKDLPS 189 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCccc----ccCcccCccccccCcHHHHHHHHHHHHHHH
Confidence 3999999999888888887775 89888888877655444432221 111100000000000001111111111110
Q ss_pred cC---CCCCchhHHHHHHHH-------HHHHhccCccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCC
Q 017266 103 SF---PSQPDVQKLYFEATS-------AVAQSLKISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPE 172 (374)
Q Consensus 103 ~~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~ 172 (374)
.. ............... .......+++..++|+.+.++...++..+++++|||++...... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~--------~ 261 (496)
T KOG1192|consen 190 FLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQ--------K 261 (496)
T ss_pred HHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCccc--------c
Confidence 00 000000001111110 11133457789999999999985577899999999999852111 1
Q ss_pred CccchhhhhcCCCC--ceEEEeecccc---cCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCc
Q 017266 173 DSTCLSWLDKQAIG--SVIYVAFGSAA---VLSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRG 246 (374)
Q Consensus 173 ~~~~~~~l~~~~~~--~vv~vs~GS~~---~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (374)
...+.+|++..+.. ++|||||||+. .++.++..+++.+|++. +++|+|+++... ...+++++.++-++|+
T Consensus 262 ~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~----~~~~~~~~~~~~~~nV 337 (496)
T KOG1192|consen 262 SPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDD----SIYFPEGLPNRGRGNV 337 (496)
T ss_pred ccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCc----chhhhhcCCCCCcCce
Confidence 11466888877665 89999999997 79999999999999999 888999999651 1113334322223567
Q ss_pred EEEeecChHHh-hCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHH
Q 017266 247 KFVEWAPQEKV-LGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIY 325 (374)
Q Consensus 247 ~~~~~~pq~~l-L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~ 325 (374)
...+|+||.++ |.|+++++|||||||||++|++++|||||++|+++||+.||+++++. |.|..+...+ ++...+.
T Consensus 338 ~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~~~---~~~~~~~ 413 (496)
T KOG1192|consen 338 VLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRH-GGGGVLDKRD---LVSEELL 413 (496)
T ss_pred EEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhC-CCEEEEehhh---cCcHHHH
Confidence 77899999998 69999999999999999999999999999999999999999999997 5555555544 5665599
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHh
Q 017266 326 NRVKALLNDDGIKANALKMKEMARKS 351 (374)
Q Consensus 326 ~~i~~~l~~~~~~~~a~~l~~~~~~~ 351 (374)
+++.+++++++|+++|+++++.+++.
T Consensus 414 ~~~~~il~~~~y~~~~~~l~~~~~~~ 439 (496)
T KOG1192|consen 414 EAIKEILENEEYKEAAKRLSEILRDQ 439 (496)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999874
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=6.5e-34 Score=273.96 Aligned_cols=197 Identities=20% Similarity=0.306 Sum_probs=164.8
Q ss_pred CccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHH
Q 017266 127 ISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEE 206 (374)
Q Consensus 127 ~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~ 206 (374)
..+..+..+.+.|+++..++++++++|||+...... ...|.....++++||||+||........+.+
T Consensus 179 ~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~-------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~ 245 (392)
T TIGR01426 179 RRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKE-------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRT 245 (392)
T ss_pred CcCcEEEeCChHhCCCccccCCCeEEECCCCCCccc-------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHH
Confidence 445578888888987755788999999998763111 1246666667789999999986656668889
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccc
Q 017266 207 LALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFL 286 (374)
Q Consensus 207 ~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l 286 (374)
+++++.+.+.+++|..+.... ...+ ...++|+.+.+|+||.++|.++++ +|||||+||++|++++|+|+|
T Consensus 246 ~~~al~~~~~~~i~~~g~~~~-------~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v 315 (392)
T TIGR01426 246 CVEAFRDLDWHVVLSVGRGVD-------PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMV 315 (392)
T ss_pred HHHHHhcCCCeEEEEECCCCC-------hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEE
Confidence 999999999999999875411 0111 123677889999999999999998 999999999999999999999
Q ss_pred cccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 017266 287 CWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 287 ~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 350 (374)
++|...||..||+++++ +|+|+.+...+ ++.++|.++|+++++|++|+++++++++.++.
T Consensus 316 ~~p~~~dq~~~a~~l~~-~g~g~~l~~~~---~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 316 AVPQGADQPMTARRIAE-LGLGRHLPPEE---VTAEKLREAVLAVLSDPRYAERLRKMRAEIRE 375 (392)
T ss_pred ecCCcccHHHHHHHHHH-CCCEEEecccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999 59999998766 89999999999999999999999999999987
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.98 E-value=3.3e-31 Score=255.95 Aligned_cols=275 Identities=19% Similarity=0.137 Sum_probs=186.1
Q ss_pred CcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCCCccccccc
Q 017266 23 EQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLPWKKNEYIW 102 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (374)
.++|+||+|.+.+++..+|+++|||++.+++++........+ .. ... ....+
T Consensus 103 ~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~--~~------------------------~~~--~~~~~ 154 (401)
T cd03784 103 WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPP--PL------------------------GRA--NLRLY 154 (401)
T ss_pred cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCC--cc------------------------chH--HHHHH
Confidence 349999999988999999999999999998765432110000 00 000 00000
Q ss_pred cCCCCCchhHHHHHHHHHHHHhc---------cCccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCC
Q 017266 103 SFPSQPDVQKLYFEATSAVAQSL---------KISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPED 173 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~ 173 (374)
......................+ ...+..+....+.+.++..+++++..++|.......... ..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~ 228 (401)
T cd03784 155 ALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNG------PPP 228 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeCCCCCCCCCCC------CCC
Confidence 00000000000000000011101 112344455555555444677788888863322111111 245
Q ss_pred ccchhhhhcCCCCceEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA 252 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (374)
.++..|++. ++++|||++||... ........+++++...+.++||+.+.... . . ...++|+++.+|+
T Consensus 229 ~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~----~--~----~~~~~~v~~~~~~ 296 (401)
T cd03784 229 PELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGL----G--A----EDLPDNVRVVDFV 296 (401)
T ss_pred HHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccc----c--c----cCCCCceEEeCCC
Confidence 667788875 34599999999865 44567788999999889999999986511 0 0 1236788999999
Q ss_pred ChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 253 PQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
||.++|.++++ ||||||+||++|++++|||+|++|+..||+.||+++++ +|+|+.+...+ ++.++|.++|++++
T Consensus 297 p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~~~---~~~~~l~~al~~~l 370 (401)
T cd03784 297 PHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRE---LTAERLAAALRRLL 370 (401)
T ss_pred CHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCccc---CCHHHHHHHHHHHh
Confidence 99999999999 99999999999999999999999999999999999999 59999998776 89999999999999
Q ss_pred cChHHHHHHHHHHHHHHH
Q 017266 333 NDDGIKANALKMKEMARK 350 (374)
Q Consensus 333 ~~~~~~~~a~~l~~~~~~ 350 (374)
+++ +++++++.++.+++
T Consensus 371 ~~~-~~~~~~~~~~~~~~ 387 (401)
T cd03784 371 DPP-SRRRAAALLRRIRE 387 (401)
T ss_pred CHH-HHHHHHHHHHHHHh
Confidence 854 66667777777655
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-29 Score=241.76 Aligned_cols=190 Identities=22% Similarity=0.299 Sum_probs=156.1
Q ss_pred cCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCC
Q 017266 146 LVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPD 225 (374)
Q Consensus 146 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~ 225 (374)
++....++||+... ...+...| ...++++||+|+||.... .+.++.+++++..++.+||...+..
T Consensus 211 ~p~~~~~~~~~~~~------------~~~~~~~~--~~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~ 275 (406)
T COG1819 211 LPFIGPYIGPLLGE------------AANELPYW--IPADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA 275 (406)
T ss_pred CCCCcCcccccccc------------ccccCcch--hcCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc
Confidence 34455567777653 22223344 334556999999999766 8889999999999999999998752
Q ss_pred CCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHh
Q 017266 226 FMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAW 305 (374)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 305 (374)
. ..... .++|+.+.+|+||..+|.++++ ||||||+||++||+++|||+|++|...||+.||+++++ +
T Consensus 276 -~-~~~~~--------~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~ 342 (406)
T COG1819 276 -R-DTLVN--------VPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-L 342 (406)
T ss_pred -c-ccccc--------CCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-c
Confidence 0 01222 2567799999999999999999 99999999999999999999999999999999999999 5
Q ss_pred cceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 306 KVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 306 g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
|+|+.+..++ ++.+.++++|+++|+|++|+++++++++.++.. +| .+.+.++++++..
T Consensus 343 G~G~~l~~~~---l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~ 400 (406)
T COG1819 343 GAGIALPFEE---LTEERLRAAVNEVLADDSYRRAAERLAEEFKEE---DG--PAKAADLLEEFAR 400 (406)
T ss_pred CCceecCccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHh
Confidence 9999999887 999999999999999999999999999999985 44 5666777766543
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.78 E-value=2.5e-17 Score=155.77 Aligned_cols=145 Identities=19% Similarity=0.219 Sum_probs=109.3
Q ss_pred CCCCceEEEeecccccCC-HHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec-ChH-HhhC
Q 017266 183 QAIGSVIYVAFGSAAVLS-QQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA-PQE-KVLG 259 (374)
Q Consensus 183 ~~~~~vv~vs~GS~~~~~-~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq~-~lL~ 259 (374)
.+++++|+|..||..... .+.+.+++..+.. +.+++|+++... +.+.. .+ ..+..+.+|+ ++. ++++
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~~~~~-~~-~~~~~~~~f~~~~m~~~~~ 251 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------LDDSL-QN-KEGYRQFEYVHGELPDILA 251 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------HHHHH-hh-cCCcEEecchhhhHHHHHH
Confidence 345679999999995433 3445555555533 488999998651 11111 01 1234556787 434 5999
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccccch-----hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF-----VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+++. |+|..+..++ ++.+.|.+++.++++|
T Consensus 252 ~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~~---~~~~~l~~~l~~ll~~ 325 (352)
T PRK12446 252 ITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEED---VTVNSLIKHVEELSHN 325 (352)
T ss_pred hCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchhc---CCHHHHHHHHHHHHcC
Confidence 9999 99999999999999999999999984 4899999999995 9999998776 8999999999999988
Q ss_pred hH-HHHHHHH
Q 017266 335 DG-IKANALK 343 (374)
Q Consensus 335 ~~-~~~~a~~ 343 (374)
++ |++++++
T Consensus 326 ~~~~~~~~~~ 335 (352)
T PRK12446 326 NEKYKTALKK 335 (352)
T ss_pred HHHHHHHHHH
Confidence 64 6655544
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.74 E-value=1.9e-16 Score=148.26 Aligned_cols=121 Identities=18% Similarity=0.281 Sum_probs=95.7
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec--ChHHhhCCCC
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLH-QPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA--PQEKVLGHPS 262 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pq~~lL~~~~ 262 (374)
++.|+|++|..... .+++++++.+ +++++. +.. ... ...+|+.+.++. ...++|..++
T Consensus 192 ~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~----~~~--------~~~~ni~~~~~~~~~~~~~m~~ad 252 (318)
T PF13528_consen 192 EPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPN----AAD--------PRPGNIHVRPFSTPDFAELMAAAD 252 (318)
T ss_pred CCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCC----ccc--------ccCCCEEEeecChHHHHHHHHhCC
Confidence 34799999987432 5666776665 566655 543 000 115677888875 3456999998
Q ss_pred CCcEEeccCchhHHHHhhcCcccccccc--hhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 263 VACFLSHCGWNSSIEGLSMGVPFLCWPY--FVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 263 ~~~~I~HgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+ +|||||.||++|++++|+|+|++|. +.||..||+.+++ +|+|+.+...+ ++++.|++.|+++
T Consensus 253 ~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~---~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 253 L--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQED---LTPERLAEFLERL 317 (318)
T ss_pred E--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEccccc---CCHHHHHHHHhcC
Confidence 8 9999999999999999999999999 7899999999999 59999998776 9999999998764
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=6.1e-16 Score=145.07 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=119.9
Q ss_pred CCceEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcC-CC-cEEEeecChHH-hhCC
Q 017266 185 IGSVIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVS-DR-GKFVEWAPQEK-VLGH 260 (374)
Q Consensus 185 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~pq~~-lL~~ 260 (374)
++++|+|..||+.. .-.+.+.++...+.+ ...|++.++.+ . .+....... .+ ..+.+|..+.. +++.
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~-------~-~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN-------D-LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc-------h-HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 56699999999943 344556666666655 67888998866 1 112222221 22 56779988775 9999
Q ss_pred CCCCcEEeccCchhHHHHhhcCcccccccch----hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 261 PSVACFLSHCGWNSSIEGLSMGVPFLCWPYF----VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
+++ +||++|++|+.|++++|+|+|.+|+. .||..||+.++++ |+|..++..+ +|.+++.+.|.+++++++
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~~---lt~~~l~~~i~~l~~~~~ 326 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQSE---LTPEKLAELILRLLSNPE 326 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEecccc---CCHHHHHHHHHHHhcCHH
Confidence 999 99999999999999999999999973 4899999999996 9999999988 999999999999998844
Q ss_pred HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 337 IKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
+.+++++..++. -..++.+.+.+.+..+
T Consensus 327 ---~l~~m~~~a~~~--~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 327 ---KLKAMAENAKKL--GKPDAAERIADLLLAL 354 (357)
T ss_pred ---HHHHHHHHHHhc--CCCCHHHHHHHHHHHH
Confidence 333333333332 1224455555555443
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.68 E-value=3.9e-15 Score=139.48 Aligned_cols=127 Identities=16% Similarity=0.191 Sum_probs=92.2
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC--hHHhhCCCCC
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP--QEKVLGHPSV 263 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--q~~lL~~~~~ 263 (374)
++.|+|.+||... ..+++++.+.+. +.+++... ...... .++|+.+.+|.| ..++|..+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~------~~~~~~----~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSY------EVAKNS----YNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCC------CCCccc----cCCCEEEEECChHHHHHHHHhCCE
Confidence 3478888888532 345667766553 23333222 011111 256778889987 3457888888
Q ss_pred CcEEeccCchhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 264 ACFLSHCGWNSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 264 ~~~I~HgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
+|||||++|++|++++|+|++++|..+ ||..||+.+++. |+|+.++..+ + ++.+++.++++|+.|.
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~~---~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYKE---L---RLLEAILDIRNMKRYK 318 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChhh---H---HHHHHHHhcccccccc
Confidence 999999999999999999999999854 899999999995 9999998765 4 6666777777777654
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.55 E-value=2.1e-16 Score=133.90 Aligned_cols=139 Identities=17% Similarity=0.187 Sum_probs=97.5
Q ss_pred eEEEeecccccC-CHHHHHHHHHHHhc--CCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC-hHHhhCCCCC
Q 017266 188 VIYVAFGSAAVL-SQQQLEELALGLES--LHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP-QEKVLGHPSV 263 (374)
Q Consensus 188 vv~vs~GS~~~~-~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q~~lL~~~~~ 263 (374)
+|+|++||.... -.+.+..+...+.. ...+|++++|... .......+ .....++.+.+|.+ ...++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~----~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNN----YEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCE----CHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCc----HHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 489999987431 11122233333332 2578889988651 11111111 11125778899999 6669999999
Q ss_pred CcEEeccCchhHHHHhhcCcccccccchh----hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 264 ACFLSHCGWNSSIEGLSMGVPFLCWPYFV----DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 264 ~~~I~HgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
+|||||.+|++|++++|+|+|++|... ||..||..+++. |+|+.+...+ .+.++|.++|.+++.++..
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~~---~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDESE---LNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECCC----SCCCHHHHHHCHCCCHH-
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCccc---CCHHHHHHHHHHHHcCcHH
Confidence 999999999999999999999999987 999999999995 9999998876 7788999999999988864
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.47 E-value=4.2e-12 Score=120.78 Aligned_cols=166 Identities=13% Similarity=0.097 Sum_probs=110.8
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhcCCC--CEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC-hHHhhCCC
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLESLHQ--PFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP-QEKVLGHP 261 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~--~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q~~lL~~~ 261 (374)
+..+|++..|+.... .....+.+++.+... .++|.++... .+.+.+.. + ..-++.+.+|+. ..+++..+
T Consensus 182 ~~~~i~~~gg~~~~~--~~~~~l~~a~~~~~~~~~~~~~~G~g~----~~~~~~~~-~-~~~~v~~~g~~~~~~~~~~~~ 253 (357)
T PRK00726 182 GKPTLLVVGGSQGAR--VLNEAVPEALALLPEALQVIHQTGKGD----LEEVRAAY-A-AGINAEVVPFIDDMAAAYAAA 253 (357)
T ss_pred CCeEEEEECCcHhHH--HHHHHHHHHHHHhhhCcEEEEEcCCCc----HHHHHHHh-h-cCCcEEEeehHhhHHHHHHhC
Confidence 344677766664221 111222244443322 4566777551 11111111 1 122367778884 45699999
Q ss_pred CCCcEEeccCchhHHHHhhcCcccccccc----hhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 262 SVACFLSHCGWNSSIEGLSMGVPFLCWPY----FVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 262 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+.+. |.|+.+..++ ++.+.+.++|.++++|+++
T Consensus 254 d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~~---~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 254 DL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQSD---LTPEKLAEKLLELLSDPER 327 (357)
T ss_pred CE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEccc---CCHHHHHHHHHHHHcCHHH
Confidence 99 9999999999999999999999996 46899999999995 9999998766 7899999999999999888
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHH
Q 017266 338 KANALKMKEMARKSLGEGGSSFRNFESFISQ 368 (374)
Q Consensus 338 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~ 368 (374)
+++..+-+.... +.++..+.+..+.+.
T Consensus 328 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 354 (357)
T PRK00726 328 LEAMAEAARALG----KPDAAERLADLIEEL 354 (357)
T ss_pred HHHHHHHHHhcC----CcCHHHHHHHHHHHH
Confidence 776666554432 244444444444443
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.44 E-value=8.7e-12 Score=118.10 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=121.2
Q ss_pred ccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCC-HHHHHH
Q 017266 128 SNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLS-QQQLEE 206 (374)
Q Consensus 128 ~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~-~~~~~~ 206 (374)
++.+++.+....+. . ...++..+|.....+...+ .+. .+.+...+++.+|++..|+..... .+.+.+
T Consensus 135 ~~~vi~~s~~~~~~--~-~~~~~~~i~n~v~~~~~~~-------~~~--~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~ 202 (350)
T cd03785 135 ADRVALSFPETAKY--F-PKDKAVVTGNPVREEILAL-------DRE--RARLGLRPGKPTLLVFGGSQGARAINEAVPE 202 (350)
T ss_pred hCEEEEcchhhhhc--C-CCCcEEEECCCCchHHhhh-------hhh--HHhcCCCCCCeEEEEECCcHhHHHHHHHHHH
Confidence 56666665544332 1 1346777776543211000 110 122222334446666666653211 122333
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec-ChHHhhCCCCCCcEEeccCchhHHHHhhcCccc
Q 017266 207 LALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA-PQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPF 285 (374)
Q Consensus 207 ~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~ 285 (374)
.+..+.+.+..+++.++.. ..+.+.+... ...+|+.+.+|. +...+|+.+++ +|+|+|.++++||+++|+|+
T Consensus 203 a~~~l~~~~~~~~~i~G~g----~~~~l~~~~~-~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pv 275 (350)
T cd03785 203 ALAELLRKRLQVIHQTGKG----DLEEVKKAYE-ELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPA 275 (350)
T ss_pred HHHHhhccCeEEEEEcCCc----cHHHHHHHHh-ccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCE
Confidence 4444543345566677654 1111111111 113678888887 44569999999 99999999999999999999
Q ss_pred ccccc----hhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 286 LCWPY----FVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 286 l~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
|+.|. ..+|..|++.+.+. |.|+.+...+ .+.+++.++|+++++|++.+++..+-+
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~ 335 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKA-GAAVLIPQEE---LTPERLAAALLELLSDPERLKAMAEAA 335 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhC-CCEEEEecCC---CCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99986 46788999999985 9999998754 689999999999998887655444433
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.37 E-value=6.7e-11 Score=113.91 Aligned_cols=138 Identities=14% Similarity=0.205 Sum_probs=97.7
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecChH-HhhC
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLES--LHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQE-KVLG 259 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~-~lL~ 259 (374)
++++|+++.|+... ...+..+++++.+ .+.+++++.+.+. .+-+.+.+.. .+++.+.+|+++. ++++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 44588888888752 1334455555432 2456767766440 1111121111 3567788998766 4999
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccc-cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCW-PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
.+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+.+. |+|+.. -+.+++.++|.++++|++.+
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~-------~~~~~l~~~i~~ll~~~~~~ 342 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIA-------DTPEEAIKIVASLTNGNEQL 342 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEe-------CCHHHHHHHHHHHhcCHHHH
Confidence 9999 99999889999999999999998 7666777899999995 999875 26788999999999887644
Q ss_pred HH
Q 017266 339 AN 340 (374)
Q Consensus 339 ~~ 340 (374)
++
T Consensus 343 ~~ 344 (391)
T PRK13608 343 TN 344 (391)
T ss_pred HH
Confidence 33
No 36
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.36 E-value=1.3e-11 Score=118.37 Aligned_cols=172 Identities=11% Similarity=0.048 Sum_probs=116.0
Q ss_pred CCCCceEEEeecccccCCHHHHHHHHHHHhc---C--CCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecChH
Q 017266 183 QAIGSVIYVAFGSAAVLSQQQLEELALGLES---L--HQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQE 255 (374)
Q Consensus 183 ~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~---~--~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~ 255 (374)
.+++++|.+..||...-.......+++++.. . +.++++........ ..+ +.+.+.. ..++.+..+ ...
T Consensus 188 ~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~---~~~-~~~~~~~~~~~~v~~~~~-~~~ 262 (385)
T TIGR00215 188 DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRR---LQF-EQIKAEYGPDLQLHLIDG-DAR 262 (385)
T ss_pred CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhH---HHH-HHHHHHhCCCCcEEEECc-hHH
Confidence 3455688888899843223344445544332 2 33455544322000 000 1111111 122232322 344
Q ss_pred HhhCCCCCCcEEeccCchhHHHHhhcCcccccc----cchh---h------hhhhHHHHHhHhcceeEeecCCCCCcCHH
Q 017266 256 KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW----PYFV---D------QYQNRNYICDAWKVGSQFFPDENGIITRQ 322 (374)
Q Consensus 256 ~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~----P~~~---D------Q~~na~~v~~~~g~G~~l~~~~~~~~~~~ 322 (374)
.+++.+++ +|+.+|..|+ |++++|+|+|++ |+.. + |..|+..++++ ++...+..++ +|++
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~~---~~~~ 335 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQEE---CTPH 335 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCCC---CCHH
Confidence 58999999 9999999887 999999999999 8742 2 77799999996 9888888777 9999
Q ss_pred HHHHHHHHHhcCh----HHHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 323 EIYNRVKALLNDD----GIKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 323 ~l~~~i~~~l~~~----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
.|.+.+.++++|+ +++++.++--..+++.++++|.+.+....++
T Consensus 336 ~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 336 PLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 9999999999999 8888888888888888888888776655544
No 37
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.34 E-value=1.6e-10 Score=111.02 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=94.9
Q ss_pred CCCceEEEeecccccCC-HHHHHHHHHHHh-----cCCCCEEEEEcCCCCCccccCCCchhhhh-cCCCcEEEeecChHH
Q 017266 184 AIGSVIYVAFGSAAVLS-QQQLEELALGLE-----SLHQPFLWVVRPDFMNRSHAKLPDGFVER-VSDRGKFVEWAPQEK 256 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~-~~~~~~~~~~l~-----~~~~~viw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~~ 256 (374)
+++++|++..|+..... ...++.+...+. ..+.++++.+|.+. .+-+.+.+. ...++.+.+|+++..
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~ 277 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNME 277 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHH
Confidence 44557777777653222 222333332221 23356677787541 111111111 134577889998664
Q ss_pred -hhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhh-hhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 257 -VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQY-QNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 257 -lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
+++.+++ +|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+. |.|+.+ -+.+++.++|.+++.|
T Consensus 278 ~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~-------~~~~~la~~i~~ll~~ 347 (382)
T PLN02605 278 EWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS-------ESPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec-------CCHHHHHHHHHHHHcC
Confidence 9999999 999999999999999999999998766665 699989885 999765 2788999999999987
Q ss_pred -hHHHHH
Q 017266 335 -DGIKAN 340 (374)
Q Consensus 335 -~~~~~~ 340 (374)
++.+++
T Consensus 348 ~~~~~~~ 354 (382)
T PLN02605 348 KSDELEA 354 (382)
T ss_pred CHHHHHH
Confidence 554433
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.29 E-value=3.9e-10 Score=108.20 Aligned_cols=141 Identities=19% Similarity=0.253 Sum_probs=100.0
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhh---hhcCCCcEEEeecChH-HhhC
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFV---ERVSDRGKFVEWAPQE-KVLG 259 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pq~-~lL~ 259 (374)
++++|++..|+.... ..+..+++++.+. +.+++++.+.+. .+.+.+. +..++++.+.+|+++. ++++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 445788877887432 2345667777543 567777766430 0111111 1123578888999875 6999
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccc-cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCW-PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
.+++ +|+.+|..++.||+++|+|+|+. |..+.|..|+..+.+. |+|+.. -+.+++.++|.++++|++.+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~-------~~~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVI-------RDDEEVFAKTEALLQDDMKL 342 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEE-------CCHHHHHHHHHHHHCCHHHH
Confidence 9998 99999988999999999999985 6667778899888874 888754 26789999999999998765
Q ss_pred HHHHH
Q 017266 339 ANALK 343 (374)
Q Consensus 339 ~~a~~ 343 (374)
++..+
T Consensus 343 ~~m~~ 347 (380)
T PRK13609 343 LQMKE 347 (380)
T ss_pred HHHHH
Confidence 55443
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.19 E-value=1.5e-09 Score=104.39 Aligned_cols=189 Identities=13% Similarity=0.078 Sum_probs=111.4
Q ss_pred CccEEEEcCCccCCcchhccCCCEEeec-ccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHH
Q 017266 127 ISNWILCNSFYELDSPACDLVPNILTIG-PLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLE 205 (374)
Q Consensus 127 ~~~~~l~ns~~~le~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~ 205 (374)
.++.+++.+...-+.- ....-++.+|| |+... -... ... . + .++.++|.+-.||...-....+.
T Consensus 160 ~a~~v~~~~~~t~~~l-~~~g~k~~~vGnPv~d~-l~~~--------~~~--~-l--~~~~~~lllLpGSR~ae~~~~lp 224 (396)
T TIGR03492 160 RCLAVFVRDRLTARDL-RRQGVRASYLGNPMMDG-LEPP--------ERK--P-L--LTGRFRIALLPGSRPPEAYRNLK 224 (396)
T ss_pred hhCEEeCCCHHHHHHH-HHCCCeEEEeCcCHHhc-Cccc--------ccc--c-c--CCCCCEEEEECCCCHHHHHccHH
Confidence 5677776664433221 22224899999 55542 1110 000 1 1 22345899999998332222333
Q ss_pred HHHHHHhc----CCCCEEEEEcCCCCCccccCCCchhhh-hc--------------CCCcEEEeecCh-HHhhCCCCCCc
Q 017266 206 ELALGLES----LHQPFLWVVRPDFMNRSHAKLPDGFVE-RV--------------SDRGKFVEWAPQ-EKVLGHPSVAC 265 (374)
Q Consensus 206 ~~~~~l~~----~~~~viw~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~pq-~~lL~~~~~~~ 265 (374)
.+++++.. .+..|++.+...... ..+...+.+ .. .++..+..+..+ ..+++.+++
T Consensus 225 ~~l~al~~L~~~~~~~~v~~~~~~~~~---~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl-- 299 (396)
T TIGR03492 225 LLLRALEALPDSQPFVFLAAIVPSLSL---EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL-- 299 (396)
T ss_pred HHHHHHHHHhhCCCeEEEEEeCCCCCH---HHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--
Confidence 44444433 356788887433100 000000000 00 122445555443 469999999
Q ss_pred EEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhH---hcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDA---WKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
+|+.+|..| .|+++.|+|+|.+|...+|. |+...++. .|.++.+.. .+.+.|.+++.++++|++.+++..
T Consensus 300 vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~-----~~~~~l~~~l~~ll~d~~~~~~~~ 372 (396)
T TIGR03492 300 GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS-----KNPEQAAQVVRQLLADPELLERCR 372 (396)
T ss_pred EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC-----CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 999999766 99999999999999877776 98766541 166666654 355899999999999987665544
No 40
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.07 E-value=8.4e-09 Score=98.95 Aligned_cols=107 Identities=14% Similarity=0.158 Sum_probs=69.9
Q ss_pred hHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccch--------hhhhhh-----HHHHHhHhcceeEeecCCCCCcC
Q 017266 254 QEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF--------VDQYQN-----RNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 254 q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~--------~DQ~~n-----a~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
-..+++.+++ +|+.+|.+++ |++++|+|+|..|-. .+|..| ++.+++. +++..+...+ .+
T Consensus 255 ~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~---~~ 327 (380)
T PRK00025 255 KREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQEE---AT 327 (380)
T ss_pred HHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcCCC---CC
Confidence 3458999999 9999998877 999999999988431 133333 2333332 3344444444 78
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHH
Q 017266 321 RQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQ 368 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~ 368 (374)
.+++.+++.++++|++.+++..+-.+.+++.. ..|.+.+.++.+.+.
T Consensus 328 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 328 PEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLEL 374 (380)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 99999999999999987765555554444443 345444444444433
No 41
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.04 E-value=8.5e-09 Score=94.55 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=75.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecChH-HhhCCC
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLES--LHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQE-KVLGHP 261 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~-~lL~~~ 261 (374)
+.|+|++|...... ....++++|.+ .+.++.+++|+.. ...+.+.+.. ..|+.+..++++. .++..+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSN------PNLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCC------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 47899998653322 34455666654 3457788888651 1112222211 3578888999987 599999
Q ss_pred CCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHH
Q 017266 262 SVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNY 300 (374)
Q Consensus 262 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 300 (374)
++ +||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 99 999999 9999999999999999999999999975
No 42
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.94 E-value=8.7e-09 Score=97.45 Aligned_cols=85 Identities=21% Similarity=0.280 Sum_probs=71.7
Q ss_pred ChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccch---hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHH
Q 017266 253 PQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF---VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
+-..+|+.+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+. |.|+.+...+ .+.+++.++|+
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~~---~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQKE---LLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEeccc---CCHHHHHHHHH
Confidence 45668999999 99999988999999999999999863 4788899999884 9999987765 68999999999
Q ss_pred HHhcChHHHHHHHH
Q 017266 330 ALLNDDGIKANALK 343 (374)
Q Consensus 330 ~~l~~~~~~~~a~~ 343 (374)
++++|++++++..+
T Consensus 317 ~ll~~~~~~~~~~~ 330 (348)
T TIGR01133 317 KLLLDPANLEAMAE 330 (348)
T ss_pred HHHcCHHHHHHHHH
Confidence 99999876654443
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.85 E-value=1.4e-07 Score=85.75 Aligned_cols=181 Identities=18% Similarity=0.224 Sum_probs=123.8
Q ss_pred CccEEEEcCCccCCcchhc------cCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCC
Q 017266 127 ISNWILCNSFYELDSPACD------LVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLS 200 (374)
Q Consensus 127 ~~~~~l~ns~~~le~~~~~------~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~ 200 (374)
.-|.+++-..|.|-.+... ...++.++|.+.. +-+.. +.+. ... +++-.|+||-|-... .
T Consensus 167 ~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~-~~~~~------~~p~-----~~~-pE~~~Ilvs~GGG~d-G 232 (400)
T COG4671 167 FYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQR-SLPHL------PLPP-----HEA-PEGFDILVSVGGGAD-G 232 (400)
T ss_pred hheEEEEecCccccChhhcCCccHhhhhheeEeEEeec-cCcCC------CCCC-----cCC-CccceEEEecCCChh-h
Confidence 4578888888887544222 2248999999822 11110 0111 111 233368888877532 3
Q ss_pred HHHHHHHHHHHhc-CCC--CEEEEEcCCCCCccccCCCchhh----hhcC--CCcEEEeecChH-HhhCCCCCCcEEecc
Q 017266 201 QQQLEELALGLES-LHQ--PFLWVVRPDFMNRSHAKLPDGFV----ERVS--DRGKFVEWAPQE-KVLGHPSVACFLSHC 270 (374)
Q Consensus 201 ~~~~~~~~~~l~~-~~~--~viw~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~pq~-~lL~~~~~~~~I~Hg 270 (374)
.+.+...+.+-.. .+. ..+.++|+. .|+... ...+ +++.+.+|..+. .++..++. +|+-|
T Consensus 233 ~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~ 302 (400)
T COG4671 233 AELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMG 302 (400)
T ss_pred HHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecc
Confidence 4555555555433 233 355556644 343332 2234 677888997765 48888888 99999
Q ss_pred CchhHHHHhhcCcccccccch---hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 271 GWNSSIEGLSMGVPFLCWPYF---VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 271 G~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
|.||++|-+.+|+|.+++|.. .||-.-|.++++ +|+.-.+..++ ++++.++++|...+.-+
T Consensus 303 GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~---lt~~~La~al~~~l~~P 366 (400)
T COG4671 303 GYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPEN---LTPQNLADALKAALARP 366 (400)
T ss_pred cchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCccc---CChHHHHHHHHhcccCC
Confidence 999999999999999999984 499999999999 79988888877 99999999999888744
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.77 E-value=4.9e-06 Score=78.28 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=88.3
Q ss_pred eEEEeeccccc-CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hhCCCC
Q 017266 188 VIYVAFGSAAV-LSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VLGHPS 262 (374)
Q Consensus 188 vv~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~~~~ 262 (374)
.+++..|+... -..+.+.+++..+... +..++ .+|... .. ..+. ...+++.+.+|+++.+ +++.++
T Consensus 198 ~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~-i~G~~~---~~----~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d 268 (364)
T cd03814 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLV-IVGDGP---AR----ARLE-ARYPNVHFLGFLDGEELAAAYASAD 268 (364)
T ss_pred eEEEEEeccccccCHHHHHHHHHHhhhcCCceEE-EEeCCc---hH----HHHh-ccCCcEEEEeccCHHHHHHHHHhCC
Confidence 56677777632 2334444444444332 34444 444331 00 1111 2256788889988665 788999
Q ss_pred CCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 263 VACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 263 ~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
+ +|.++. .++++||+++|+|+|+.+..+ +...+.+. +.|..+.. -+.+++.++|.+++.|++.+
T Consensus 269 ~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~-----~~~~~l~~~i~~l~~~~~~~ 336 (364)
T cd03814 269 V--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEP-----GDAEAFAAALAALLADPELR 336 (364)
T ss_pred E--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCC-----CCHHHHHHHHHHHHcCHHHH
Confidence 8 886654 378999999999999887543 44555653 78887765 36788999999999998755
Q ss_pred HHHHHHHHH
Q 017266 339 ANALKMKEM 347 (374)
Q Consensus 339 ~~a~~l~~~ 347 (374)
++..+-+..
T Consensus 337 ~~~~~~~~~ 345 (364)
T cd03814 337 RRMAARARA 345 (364)
T ss_pred HHHHHHHHH
Confidence 544444333
No 45
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.75 E-value=5.7e-07 Score=84.49 Aligned_cols=155 Identities=17% Similarity=0.136 Sum_probs=91.9
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCC--CCEEEEEcCCCCCccccCCCchhhhhcCC--CcEEEeecChHHhhCCCC
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLH--QPFLWVVRPDFMNRSHAKLPDGFVERVSD--RGKFVEWAPQEKVLGHPS 262 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~--~~viw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~pq~~lL~~~~ 262 (374)
++|.+-.||..+--...+..++++..+.. ....+..... .. +.+.+...+ ...+.+ ...+++..++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~-------~~-~~i~~~~~~~~~~~~~~--~~~~~m~~aD 237 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF-------KG-KDLKEIYGDISEFEISY--DTHKALLEAE 237 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC-------cH-HHHHHHHhcCCCcEEec--cHHHHHHhhh
Confidence 58999999984322344443444433322 1222333222 01 122221211 222232 3346899999
Q ss_pred CCcEEeccCchhHHHHhhcCcccccccc--hhhhhhhHHHHH---hHhcceeEee-------------cCCCCCcCHHHH
Q 017266 263 VACFLSHCGWNSSIEGLSMGVPFLCWPY--FVDQYQNRNYIC---DAWKVGSQFF-------------PDENGIITRQEI 324 (374)
Q Consensus 263 ~~~~I~HgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~---~~~g~G~~l~-------------~~~~~~~~~~~l 324 (374)
+ .|+.+|..|+ |+..+|+|||+ ++ ..-|+.||++++ . .|+...+- .++ .|++.|
T Consensus 238 l--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~---~t~~~l 309 (347)
T PRK14089 238 F--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEF---VTVENL 309 (347)
T ss_pred H--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhccc---CCHHHH
Confidence 9 9999999988 99999999988 55 457888999988 4 36555552 233 899999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 325 YNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 325 ~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
.+++.+ ..+++.++....+++..++ |++.+. .+.+
T Consensus 310 a~~i~~-----~~~~~~~~~~~~l~~~l~~-~a~~~~-A~~i 344 (347)
T PRK14089 310 LKAYKE-----MDREKFFKKSKELREYLKH-GSAKNV-AKIL 344 (347)
T ss_pred HHHHHH-----HHHHHHHHHHHHHHHHhcC-CHHHHH-HHHH
Confidence 998877 2455555555555555543 444333 4443
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.50 E-value=5.1e-05 Score=74.02 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=60.9
Q ss_pred cEEEeecChH-HhhCCCCCCcEEec-----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCc
Q 017266 246 GKFVEWAPQE-KVLGHPSVACFLSH-----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGII 319 (374)
Q Consensus 246 ~~~~~~~pq~-~lL~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 319 (374)
+.+.+...+. .+++.+++ ++.. +|..+++||+++|+|+|+-|...++......+.+. |+++.. -
T Consensus 304 v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~-------~ 373 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV-------E 373 (425)
T ss_pred EEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE-------C
Confidence 3444443333 47888887 4432 34446999999999999999877777777666553 655442 3
Q ss_pred CHHHHHHHHHHHhcChHHHHHHHH
Q 017266 320 TRQEIYNRVKALLNDDGIKANALK 343 (374)
Q Consensus 320 ~~~~l~~~i~~~l~~~~~~~~a~~ 343 (374)
+.+++.++|.++++|++.+++..+
T Consensus 374 d~~~La~~l~~ll~~~~~~~~m~~ 397 (425)
T PRK05749 374 DAEDLAKAVTYLLTDPDARQAYGE 397 (425)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 678999999999998875544333
No 47
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.44 E-value=1e-06 Score=70.31 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=76.2
Q ss_pred eEEEeeccccc--C-CHHHHHHHHHHHhcCCC-CEEEEEcCCCCCccccCCCchhhhhcCCCcE-E--EeecCh-HHhhC
Q 017266 188 VIYVAFGSAAV--L-SQQQLEELALGLESLHQ-PFLWVVRPDFMNRSHAKLPDGFVERVSDRGK-F--VEWAPQ-EKVLG 259 (374)
Q Consensus 188 vv~vs~GS~~~--~-~~~~~~~~~~~l~~~~~-~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~pq-~~lL~ 259 (374)
.+||+-||..- + +.-.-++..+.|.+.|. +.+..+|.+. ...+..........+. + .+|-|. .+..+
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~-----~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~ 79 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ-----PFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIR 79 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc-----cCCCCHHHhhcccCCeEEEEEecCccHHHHHh
Confidence 79999999741 1 11223345666777775 6778888661 1122222111112222 2 256675 45777
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccccc----hhhhhhhHHHHHhHhcceeE
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCWPY----FVDQYQNRNYICDAWKVGSQ 310 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~g~G~~ 310 (374)
.+++ +|+|+|+||++|.+..|+|.|+++- ..+|..-|..+++. |-=+.
T Consensus 80 ~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~ 131 (170)
T KOG3349|consen 80 SADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYY 131 (170)
T ss_pred hccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEE
Confidence 7888 9999999999999999999999993 56899999999884 64433
No 48
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.43 E-value=4.7e-06 Score=79.52 Aligned_cols=155 Identities=16% Similarity=0.197 Sum_probs=90.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCccccCCCchhhhh--cCCCcEEEeecChH---H
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESL-----HQPFLWVVRPDFMNRSHAKLPDGFVER--VSDRGKFVEWAPQE---K 256 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~-----~~~viw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~---~ 256 (374)
.+++++++-.... .+.+..+++++.+. +.++++...++. .....+.+. ..+++.+.+.++.. .
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP------VVREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------HHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 3666654432221 13466666666543 455666544320 000111111 13567777665544 4
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
+++++++ +|+-.|. .+.||+++|+|+|.++..++++. +.+. |.++.+. -+.++|.+++.++++|++
T Consensus 271 ~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~------~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 271 LAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVG------TDKENITKAAKRLLTDPD 336 (365)
T ss_pred HHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeC------CCHHHHHHHHHHHHhChH
Confidence 6788887 9997764 47999999999999876555442 2333 7776652 378899999999999887
Q ss_pred HHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 337 IKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
.+++..+-... .++++++.+-++.+.
T Consensus 337 ~~~~~~~~~~~----~g~~~a~~ri~~~l~ 362 (365)
T TIGR00236 337 EYKKMSNASNP----YGDGEASERIVEELL 362 (365)
T ss_pred HHHHhhhcCCC----CcCchHHHHHHHHHH
Confidence 76665443322 233555544444333
No 49
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.34 E-value=6.8e-05 Score=71.13 Aligned_cols=86 Identities=17% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc----------CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhccee
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC----------GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGS 309 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg----------G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~ 309 (374)
.+++.+.+++|+.+ +++.+++ +|... -.++++||+++|+|+|+-+.. .++..+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-CeeE
Confidence 56778888988654 6888888 66422 247899999999999986653 355666663 7888
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 310 QFFPDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 310 ~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
.+.. -+.+++.++|.++++|++.+++
T Consensus 317 ~~~~-----~d~~~l~~~i~~l~~~~~~~~~ 342 (367)
T cd05844 317 LVPE-----GDVAALAAALGRLLADPDLRAR 342 (367)
T ss_pred EECC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 7765 3678999999999998874433
No 50
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.31 E-value=0.00044 Score=68.28 Aligned_cols=131 Identities=16% Similarity=0.190 Sum_probs=82.5
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhc-CCCcEEEeecChHH---hhCCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERV-SDRGKFVEWAPQEK---VLGHPS 262 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pq~~---lL~~~~ 262 (374)
.+++..|+... .+.+..+++++++. +.+++ .+|.+. ..+.+.+.. ..++.+.+++++.+ +++.++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~-ivG~G~-------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLA-FVGDGP-------YREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEE-EEeCCh-------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 45556677632 33455667777665 45554 444331 111222111 34677889997554 888899
Q ss_pred CCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHh---HhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 263 VACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICD---AWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 263 ~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~---~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
+ ||.-.. -++++||+++|+|+|+....+ ....+.+ . +.|+.+... +.+++.++|.++++|+
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~~-----d~~~la~~i~~ll~~~ 401 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTPG-----DVDDCVEKLETLLADP 401 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCCC-----CHHHHHHHHHHHHhCH
Confidence 8 875443 356899999999999765422 2233333 3 678888653 6789999999999988
Q ss_pred HHHHH
Q 017266 336 GIKAN 340 (374)
Q Consensus 336 ~~~~~ 340 (374)
+.+++
T Consensus 402 ~~~~~ 406 (465)
T PLN02871 402 ELRER 406 (465)
T ss_pred HHHHH
Confidence 74443
No 51
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.31 E-value=6.7e-05 Score=74.43 Aligned_cols=201 Identities=15% Similarity=0.114 Sum_probs=108.3
Q ss_pred hccCCCEEeec-ccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHh--cC--CCCE
Q 017266 144 CDLVPNILTIG-PLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLE--SL--HQPF 218 (374)
Q Consensus 144 ~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~--~~--~~~v 218 (374)
....-++.+|| |+...-+..+ ..++..+-+.-.+++++|-+--||...--...+..++++.+ .. +.++
T Consensus 377 ~~~gv~v~yVGHPL~d~i~~~~-------~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~f 449 (608)
T PRK01021 377 KDSPLRTVYLGHPLVETISSFS-------PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQL 449 (608)
T ss_pred HhcCCCeEEECCcHHhhcccCC-------CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEE
Confidence 34566899999 7765311111 12222222333345569999999984433334444555554 22 3455
Q ss_pred EEEEcCCCCCccccCCCchhhhhcCC----CcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccc-hhh
Q 017266 219 LWVVRPDFMNRSHAKLPDGFVERVSD----RGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPY-FVD 293 (374)
Q Consensus 219 iw~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~D 293 (374)
+....+. ...+.+.+...+ ++.++.--...++++.+++ .+.-+|. .++|+..+|+||+++=- ..=
T Consensus 450 vvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~L 519 (608)
T PRK01021 450 LVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPF 519 (608)
T ss_pred EEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHH
Confidence 4433222 001111111111 1122210012468888888 8887774 68899999999988521 111
Q ss_pred hhhhHHHHHhH----hc-----ceeEeec--CC-CCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHH
Q 017266 294 QYQNRNYICDA----WK-----VGSQFFP--DE-NGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRN 361 (374)
Q Consensus 294 Q~~na~~v~~~----~g-----~G~~l~~--~~-~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 361 (374)
-..-++++.+. .+ +|..+-+ -. .+..|+++|.+++ ++|.|++++++.++--+.+++.+++|-.+-++
T Consensus 520 ty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~Lg~~~~~~~~ 598 (608)
T PRK01021 520 DTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAMNESASTMKE 598 (608)
T ss_pred HHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 22234554440 01 1222111 10 1238999999997 88889888877777777777777766665443
Q ss_pred H
Q 017266 362 F 362 (374)
Q Consensus 362 ~ 362 (374)
.
T Consensus 599 ~ 599 (608)
T PRK01021 599 C 599 (608)
T ss_pred H
Confidence 3
No 52
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.22 E-value=0.0011 Score=61.63 Aligned_cols=88 Identities=18% Similarity=0.247 Sum_probs=64.4
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe----ccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS----HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++++.+ ++..+++ +|. -|.-++++||+++|+|+|+.+. ......+.+. +.|+.+..
T Consensus 255 ~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~-- 325 (374)
T cd03801 255 GDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPP-- 325 (374)
T ss_pred CcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCC--
Confidence 56788889996443 7888888 663 2445789999999999998765 3345555543 67877755
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
.+.+++.++|.++++|++.++...
T Consensus 326 ---~~~~~l~~~i~~~~~~~~~~~~~~ 349 (374)
T cd03801 326 ---GDPEALAEAILRLLDDPELRRRLG 349 (374)
T ss_pred ---CCHHHHHHHHHHHHcChHHHHHHH
Confidence 358999999999999887544433
No 53
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.19 E-value=0.00014 Score=68.88 Aligned_cols=199 Identities=18% Similarity=0.194 Sum_probs=111.3
Q ss_pred ccCCCEEeec-ccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHH---HhcC--CCCE
Q 017266 145 DLVPNILTIG-PLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALG---LESL--HQPF 218 (374)
Q Consensus 145 ~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~---l~~~--~~~v 218 (374)
...-++.||| |+...-.... .+....+.+ -.+++++|.+--||...--...+..++++ +.+. +.++
T Consensus 150 ~~g~~~~~VGHPl~d~~~~~~-------~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~f 221 (373)
T PF02684_consen 150 KHGVPVTYVGHPLLDEVKPEP-------DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQF 221 (373)
T ss_pred ccCCCeEEECCcchhhhccCC-------CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 4446899999 7765322111 122222222 23455699999999843222233333333 3332 4455
Q ss_pred EEEEcCCCCCccccCCCchhhhhcCCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccc-hhhhhh
Q 017266 219 LWVVRPDFMNRSHAKLPDGFVERVSDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPY-FVDQYQ 296 (374)
Q Consensus 219 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~ 296 (374)
++..-+.. ....-.........+..+. ..-.-.+++..+++ .+.-.| ..++|+..+|+|||++=- ..=.+.
T Consensus 222 vvp~a~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~ 294 (373)
T PF02684_consen 222 VVPVAPEV----HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYF 294 (373)
T ss_pred EEecCCHH----HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 54443220 0000001111112222332 22245568888888 666666 468999999999987632 222333
Q ss_pred hHHHHHhHhcc-e-------eEe----ecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHH
Q 017266 297 NRNYICDAWKV-G-------SQF----FPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNF 362 (374)
Q Consensus 297 na~~v~~~~g~-G-------~~l----~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 362 (374)
-|+++.+. .. | ..+ -.++ .|.+.+.+++.++++|++.++..+...+.+++..+.+.++..+.
T Consensus 295 iak~lvk~-~~isL~Niia~~~v~PEliQ~~---~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (373)
T PF02684_consen 295 IAKRLVKV-KYISLPNIIAGREVVPELIQED---ATPENIAAELLELLENPEKRKKQKELFREIRQLLGPGASSRAAQ 368 (373)
T ss_pred HHHHhhcC-CEeechhhhcCCCcchhhhccc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhhhccCCHHHH
Confidence 45555442 21 1 111 1123 89999999999999999888888888888888877787776543
No 54
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.18 E-value=0.00077 Score=64.54 Aligned_cols=85 Identities=19% Similarity=0.302 Sum_probs=63.3
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+|+|+.+ ++..+++ +++.. | -.+++||+++|+|+|+-+.. .....+.+. +.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~~-~~g~~~~~-- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVDG-VTGLLVDP-- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccCC-CCeEEeCC--
Confidence 46778889999765 5888888 77442 2 36899999999999976543 344556663 68888765
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~ 339 (374)
-+.+++.++|.++++|++.++
T Consensus 353 ---~~~~~l~~~i~~l~~~~~~~~ 373 (398)
T cd03800 353 ---RDPEALAAALRRLLTDPALRR 373 (398)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHH
Confidence 368999999999998876443
No 55
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.14 E-value=0.002 Score=60.18 Aligned_cols=83 Identities=20% Similarity=0.202 Sum_probs=61.1
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++++. .++..+++ +|.. |.-++++||+++|+|+|+-+.. .....+.+. +.|..+..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~-~~g~~~~~-- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG-ENGLLVPP-- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-cceeEECC--
Confidence 4677888999865 47788888 5522 4457899999999999986543 234445553 66777655
Q ss_pred CCCcCHHHHHHHHHHHhcChHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
-+.+++.++|.++++++..
T Consensus 329 ---~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 329 ---GDPEALAEAILRLLADPWL 347 (377)
T ss_pred ---CCHHHHHHHHHHHhcCcHH
Confidence 3788999999999998874
No 56
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.10 E-value=0.0011 Score=64.07 Aligned_cols=88 Identities=20% Similarity=0.205 Sum_probs=61.7
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEec-cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSH-CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.+++|+.+ +++.+++-++.+. .|. ++++||+++|+|+|+... ......+... ..|+.+..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCC----
Confidence 35788889998765 6788888222232 222 479999999999997643 3444555542 56777765
Q ss_pred CcCHHHHHHHHHHHhcChHHHHH
Q 017266 318 IITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
-+.+++.++|.++++|++.+++
T Consensus 351 -~d~~~la~~i~~ll~~~~~~~~ 372 (396)
T cd03818 351 -FDPDALAAAVIELLDDPARRAR 372 (396)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHH
Confidence 3689999999999998864443
No 57
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.07 E-value=0.0011 Score=62.23 Aligned_cols=83 Identities=19% Similarity=0.328 Sum_probs=61.3
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc----CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC----GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|+.+ ++..+++ +|... .-++++||+++|+|+|+.+. ...+..+.+. +.|..+...+
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~~~ 330 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPPGD 330 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCCCC
Confidence 46788889998765 6888888 66433 34789999999999998654 3344555553 6788886643
Q ss_pred CCCcCHHHHHHHHHHHhcChHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
. ++.+++.+++++++.+
T Consensus 331 -----~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 331 -----E-ALAEALLRLLQDPELR 347 (374)
T ss_pred -----H-HHHHHHHHHHhChHHH
Confidence 2 8999999999988733
No 58
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.05 E-value=0.00013 Score=68.90 Aligned_cols=135 Identities=11% Similarity=0.141 Sum_probs=86.1
Q ss_pred EEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---HhhCCCCCCc
Q 017266 189 IYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE---KVLGHPSVAC 265 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~~~ 265 (374)
.++..|+... .+....+++++.+.+.+++++-+.. ..+.+.+...+++.+.+++|+. .+++.+++-+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 3445676632 2345667777777777765543322 1122222346888999999985 4788899832
Q ss_pred EEeccCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh-HHHHHHHH
Q 017266 266 FLSHCGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD-GIKANALK 343 (374)
Q Consensus 266 ~I~HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~-~~~~~a~~ 343 (374)
+-++-|. .+++||+++|+|+|+....+ ....+.+. +.|+.+..+ +.+++.++|.++++|+ ..++++++
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~~-----~~~~la~~i~~l~~~~~~~~~~~~~ 336 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEEQ-----TVESLAAAVERFEKNEDFDPQAIRA 336 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCCC-----CHHHHHHHHHHHHhCcccCHHHHHH
Confidence 2234343 46789999999999876433 33334453 678887653 6888999999999887 44444433
No 59
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.05 E-value=0.00058 Score=64.39 Aligned_cols=140 Identities=19% Similarity=0.118 Sum_probs=82.3
Q ss_pred ceEEEeeccccc-CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hhCCC
Q 017266 187 SVIYVAFGSAAV-LSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VLGHP 261 (374)
Q Consensus 187 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~~~ 261 (374)
..+++..|+... -..+.+.+.+..+.+. +.+++ .++... ....+.+........++.+.+++++.+ ++..+
T Consensus 220 ~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~-i~G~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 295 (394)
T cd03794 220 KFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFL-IVGDGP---EKEELKELAKALGLDNVTFLGRVPKEELPELLAAA 295 (394)
T ss_pred cEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEE-EeCCcc---cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhh
Confidence 367777787643 2334444444444433 44443 444331 000010100111246778889988654 77888
Q ss_pred CCCcEEeccC---------chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 262 SVACFLSHCG---------WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 262 ~~~~~I~HgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
++ +|.... -++++||+++|+|+|+.+..+.+.. +.+ .+.|..+... +.+++.++|.+++
T Consensus 296 di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~~~~~-----~~~~l~~~i~~~~ 363 (394)
T cd03794 296 DV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLVVPPG-----DPEALAAAILELL 363 (394)
T ss_pred Ce--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceEeCCC-----CHHHHHHHHHHHH
Confidence 88 664322 2347999999999999887554333 333 2567776553 6889999999999
Q ss_pred cChHHHHHHH
Q 017266 333 NDDGIKANAL 342 (374)
Q Consensus 333 ~~~~~~~~a~ 342 (374)
+|++.+++..
T Consensus 364 ~~~~~~~~~~ 373 (394)
T cd03794 364 DDPEERAEMG 373 (394)
T ss_pred hChHHHHHHH
Confidence 8887544433
No 60
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.01 E-value=0.0029 Score=58.50 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=63.8
Q ss_pred CCCcEEEeecCh-HHhhCCCCCCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCC
Q 017266 243 SDRGKFVEWAPQ-EKVLGHPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDEN 316 (374)
Q Consensus 243 ~~~~~~~~~~pq-~~lL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~ 316 (374)
..++.+.++... ..++..+++ +|.-.. -++++||+++|+|+|+.+..+.+ ..+.+. + .|+.++.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~~--- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIED-GVNGLLVPN--- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhcc-CcceEEeCC---
Confidence 345666666443 358888888 765542 46899999999999987544332 223343 4 7877765
Q ss_pred CCcCHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 017266 317 GIITRQEIYNRVKALLNDDGIKANALKMKEM 347 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~ 347 (374)
-+.+++.++|.++++|++.+++..+-+..
T Consensus 304 --~~~~~~~~~i~~ll~~~~~~~~~~~~~~~ 332 (348)
T cd03820 304 --GDVEALAEALLRLMEDEELRKRMGANARE 332 (348)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 36789999999999999866555544433
No 61
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.96 E-value=0.0046 Score=57.42 Aligned_cols=137 Identities=17% Similarity=0.218 Sum_probs=81.3
Q ss_pred ceEEEeeccccc-CCHHHHHHHHHHHhc--CCCCEEEEEcCCCCCccccCCCchh-hhh--cCCCcEEEeecChH-HhhC
Q 017266 187 SVIYVAFGSAAV-LSQQQLEELALGLES--LHQPFLWVVRPDFMNRSHAKLPDGF-VER--VSDRGKFVEWAPQE-KVLG 259 (374)
Q Consensus 187 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~viw~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~pq~-~lL~ 259 (374)
..+++..|+... -..+.+-+.+..+.+ .+.+++ .++.... ....... ... ...++.+.++..+. .++.
T Consensus 188 ~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~-i~G~~~~----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 262 (359)
T cd03808 188 DPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLL-LVGDGDE----ENPAAILEIEKLGLEGRVEFLGFRDDVPELLA 262 (359)
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEE-EEcCCCc----chhhHHHHHHhcCCcceEEEeeccccHHHHHH
Confidence 367777787632 233444444444543 234443 4443311 0000000 111 13566777765444 4888
Q ss_pred CCCCCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 260 HPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 260 ~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
.+++ +|.... -++++||+++|+|+|+-+.. .....+.+. +.|+.+..+ +.+++.++|.+++.|+
T Consensus 263 ~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~-~~g~~~~~~-----~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 263 AADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDG-VNGFLVPPG-----DAEALADAIERLIEDP 330 (359)
T ss_pred hccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcC-cceEEECCC-----CHHHHHHHHHHHHhCH
Confidence 8888 775443 47899999999999986543 234445543 678777553 6889999999999888
Q ss_pred HHHHH
Q 017266 336 GIKAN 340 (374)
Q Consensus 336 ~~~~~ 340 (374)
+.+++
T Consensus 331 ~~~~~ 335 (359)
T cd03808 331 ELRAR 335 (359)
T ss_pred HHHHH
Confidence 74443
No 62
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.91 E-value=0.0041 Score=58.58 Aligned_cols=84 Identities=17% Similarity=0.179 Sum_probs=59.8
Q ss_pred CCCcEEEeecC-hH---HhhCCCCCCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 243 SDRGKFVEWAP-QE---KVLGHPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 243 ~~~~~~~~~~p-q~---~lL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
..++.+.+|++ +. .+++.+++ +|.... .++++||+++|+|+|+.... .....+.+. +.|+.+..
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~-~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHG-VTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCC-CceEEeCC-
Confidence 45667788988 43 37888888 777543 47999999999999976542 222333442 46776654
Q ss_pred CCCCcCHHHHHHHHHHHhcChHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
.+.+++.+++.++++|++.+
T Consensus 315 ----~~~~~~~~~l~~l~~~~~~~ 334 (365)
T cd03825 315 ----GDPEDLAEGIEWLLADPDER 334 (365)
T ss_pred ----CCHHHHHHHHHHHHhCHHHH
Confidence 36889999999999888633
No 63
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.85 E-value=0.00024 Score=55.96 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=70.8
Q ss_pred EEEeecccccCCHHHHH--HHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee--cC-hHHhhCCCCC
Q 017266 189 IYVAFGSAAVLSQQQLE--ELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW--AP-QEKVLGHPSV 263 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~--~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-q~~lL~~~~~ 263 (374)
++|+-||....-...+. ++.+-.+....++|..+|... ..| + .+ ..+.+| .+ -+.+...+++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~kp--v----ag-l~v~~F~~~~kiQsli~darI 68 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IKP--V----AG-LRVYGFDKEEKIQSLIHDARI 68 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------ccc--c----cc-cEEEeechHHHHHHHhhcceE
Confidence 78899998321111111 122222333568899998751 122 0 11 144444 33 3347777777
Q ss_pred CcEEeccCchhHHHHhhcCcccccccch--------hhhhhhHHHHHhHhcceeEeecC
Q 017266 264 ACFLSHCGWNSSIEGLSMGVPFLCWPYF--------VDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 264 ~~~I~HgG~~s~~eal~~GvP~l~~P~~--------~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
+|+|||.||++.++..++|.|++|-. .+|..-|..+++ ++.=+.....
T Consensus 69 --VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~spt 124 (161)
T COG5017 69 --VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACSPT 124 (161)
T ss_pred --EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEcCC
Confidence 99999999999999999999999952 367778888887 4766665543
No 64
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.82 E-value=0.00039 Score=67.42 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=80.7
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhh-----c-CCCcEEEeecChHH---
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVER-----V-SDRGKFVEWAPQEK--- 256 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~pq~~--- 256 (374)
..++|.+|.+....+++.+....+-|++.+...+|..+.+... ...+.++ + ++++.+.++.|+.+
T Consensus 284 d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~------~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~ 357 (468)
T PF13844_consen 284 DAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG------EARLRRRFAAHGVDPDRIIFSPVAPREEHLR 357 (468)
T ss_dssp SSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH------HHHHHHHHHHTTS-GGGEEEEE---HHHHHH
T ss_pred CceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH------HHHHHHHHHHcCCChhhEEEcCCCCHHHHHH
Confidence 3499999999999999999999999999999999998754110 1122211 1 46677778777655
Q ss_pred hhCCCCCCcEE---eccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 257 VLGHPSVACFL---SHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 257 lL~~~~~~~~I---~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
.+..+++ ++ ..+|.+|++||+++|||+|.+|-..-.-..+..+-+.+|+.-.+-. +.++-.+.--++-+
T Consensus 358 ~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~------s~~eYv~~Av~La~ 429 (468)
T PF13844_consen 358 RYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD------SEEEYVEIAVRLAT 429 (468)
T ss_dssp HGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S------SHHHHHHHHHHHHH
T ss_pred HhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC------CHHHHHHHHHHHhC
Confidence 3455666 55 3568899999999999999999544333334333333587655533 55664444446777
Q ss_pred ChHHHHH
Q 017266 334 DDGIKAN 340 (374)
Q Consensus 334 ~~~~~~~ 340 (374)
|.+++++
T Consensus 430 D~~~l~~ 436 (468)
T PF13844_consen 430 DPERLRA 436 (468)
T ss_dssp -HHHHHH
T ss_pred CHHHHHH
Confidence 7775544
No 65
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.81 E-value=0.0092 Score=55.83 Aligned_cols=86 Identities=15% Similarity=0.054 Sum_probs=59.4
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+|+++.+ ++..+++ +|.-. | -++++||+++|+|+|+-+..+ ....+.. +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCC--
Confidence 46778889999544 6888888 55432 2 468999999999999875432 2333332 66766543
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
+.+++.++|.+++++++.+++..
T Consensus 331 ----~~~~~~~~i~~l~~~~~~~~~~~ 353 (375)
T cd03821 331 ----DVDALAAALRRALELPQRLKAMG 353 (375)
T ss_pred ----ChHHHHHHHHHHHhCHHHHHHHH
Confidence 34899999999999876444433
No 66
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.81 E-value=0.00083 Score=62.83 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=83.4
Q ss_pred ceEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hhCCCC
Q 017266 187 SVIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VLGHPS 262 (374)
Q Consensus 187 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~~~~ 262 (374)
..+++..|+... -..+.+-+.+..+.+.+.++++ +|.... ...........+++.+.+++++.+ +++.++
T Consensus 191 ~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i-~G~~~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 264 (359)
T cd03823 191 RLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVI-VGNGLE-----LEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264 (359)
T ss_pred ceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEE-EcCchh-----hhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 356667787632 2233333333333333455544 443310 000000001246778889997654 688888
Q ss_pred CCcEEec----cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 263 VACFLSH----CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 263 ~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
+ +|.. .|. .+++||+++|+|+|+.+.. .....+.+. +.|..+... +.+++.+++.++++|++.
T Consensus 265 ~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~~~ 332 (359)
T cd03823 265 V--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPPG-----DAEDLAAALERLIDDPDL 332 (359)
T ss_pred E--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECCC-----CHHHHHHHHHHHHhChHH
Confidence 8 6632 333 5799999999999986543 345555553 578887653 589999999999998875
Q ss_pred HHHHHH
Q 017266 338 KANALK 343 (374)
Q Consensus 338 ~~~a~~ 343 (374)
++...+
T Consensus 333 ~~~~~~ 338 (359)
T cd03823 333 LERLRA 338 (359)
T ss_pred HHHHHH
Confidence 544443
No 67
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.79 E-value=0.0064 Score=59.57 Aligned_cols=84 Identities=12% Similarity=0.129 Sum_probs=59.7
Q ss_pred CCCcEEEeecChHH---hhCCC----CCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEe
Q 017266 243 SDRGKFVEWAPQEK---VLGHP----SVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQF 311 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l 311 (374)
.+++.+.+++++.+ +++.+ ++ ||... | -.+++||+++|+|+|+-.. ......+.+. ..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~----gg~~eiv~~~-~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDD----GGPRDIIANC-RNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCC----CCcHHHhcCC-CcEEEe
Confidence 56777778877655 45544 55 87654 3 3589999999999997654 2344445542 578887
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 312 FPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
... +.+++.++|.++++|++.+
T Consensus 389 ~~~-----d~~~la~~i~~ll~~~~~~ 410 (439)
T TIGR02472 389 DVL-----DLEAIASALEDALSDSSQW 410 (439)
T ss_pred CCC-----CHHHHHHHHHHHHhCHHHH
Confidence 653 6889999999999988643
No 68
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.76 E-value=0.00029 Score=62.68 Aligned_cols=144 Identities=14% Similarity=0.111 Sum_probs=103.9
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecChH-HhhCCCCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQE-KVLGHPSVA 264 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~-~lL~~~~~~ 264 (374)
-|+|++|-.- +.....+++..|.+.++.+-.+++.. ..-+++++.+. .+|+.+......+ .++..+++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 5889888642 33456677788877776665666633 22334444333 4566666555533 58999998
Q ss_pred cEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHH
Q 017266 265 CFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKM 344 (374)
Q Consensus 265 ~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 344 (374)
.|+-+| .|++|++..|+|.+++|+...|.--|+..+. +|+-..+... ++...+...+.+++.|...|.+....
T Consensus 231 -aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~----l~~~~~~~~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 231 -AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYH----LKDLAKDYEILQIQKDYARRKNLSFG 303 (318)
T ss_pred -heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCC----CchHHHHHHHHHhhhCHHHhhhhhhc
Confidence 999888 5899999999999999999999999999988 5876666544 57777777888899888877776555
Q ss_pred HHH
Q 017266 345 KEM 347 (374)
Q Consensus 345 ~~~ 347 (374)
++.
T Consensus 304 ~~~ 306 (318)
T COG3980 304 SKL 306 (318)
T ss_pred cce
Confidence 444
No 69
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.76 E-value=0.00019 Score=68.25 Aligned_cols=139 Identities=16% Similarity=0.110 Sum_probs=84.6
Q ss_pred CceEEEeecccccC-CHHHHHHHHHHHhcCCC-CEEEEEcCCCCCccccCCCchhhhhc---CCCcEEEeecChH---Hh
Q 017266 186 GSVIYVAFGSAAVL-SQQQLEELALGLESLHQ-PFLWVVRPDFMNRSHAKLPDGFVERV---SDRGKFVEWAPQE---KV 257 (374)
Q Consensus 186 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~-~viw~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~pq~---~l 257 (374)
++++++++|..... ..+.+..+++++.+... ++..+...... ....+.+ ...+. .+++.+.+..+.. .+
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~-~~~~~~~~~~~v~~~~~~~~~~~~~l 274 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIRE-AGLEFLGHHPNVLLISPLGYLYFLLL 274 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHH-HHHhhccCCCCEEEECCcCHHHHHHH
Confidence 44777888876433 45667778888766432 24444322200 0011111 11111 3566676654433 46
Q ss_pred hCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 258 LGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
+..+++ ||+..| +.+.|++++|+|+|.++.. |. +..+.+. |+++.+. -+.+++.++|.++++++..
T Consensus 275 ~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~------~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 275 LKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG------TDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred HHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC------CCHHHHHHHHHHHhcCchh
Confidence 788898 999999 7778999999999998743 22 3344453 7665552 1478899999999988765
Q ss_pred HHHH
Q 017266 338 KANA 341 (374)
Q Consensus 338 ~~~a 341 (374)
+++.
T Consensus 341 ~~~~ 344 (363)
T cd03786 341 YSLM 344 (363)
T ss_pred hhcC
Confidence 5443
No 70
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.72 E-value=0.016 Score=53.59 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=59.5
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.++.+.. .++..+++ +|.- |.-++++||+++|+|+|+-... .....+.+. +.|+.....
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~--- 314 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPVG--- 314 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECCC---
Confidence 4567777887654 48888888 6632 2346899999999999985433 445566663 788887653
Q ss_pred CcCHHHH---HHHHHHHhcChHHHHHHHH
Q 017266 318 IITRQEI---YNRVKALLNDDGIKANALK 343 (374)
Q Consensus 318 ~~~~~~l---~~~i~~~l~~~~~~~~a~~ 343 (374)
+.+.+ .+++.++..+++.++++.+
T Consensus 315 --~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 315 --DEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred --CHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 45666 5666666676664444333
No 71
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.70 E-value=0.0064 Score=60.49 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=63.9
Q ss_pred CCCcEEEeecChHHhhCCCCCCcEEec---cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC--CC
Q 017266 243 SDRGKFVEWAPQEKVLGHPSVACFLSH---CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD--EN 316 (374)
Q Consensus 243 ~~~~~~~~~~pq~~lL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~--~~ 316 (374)
.+++.+.++.+...++..+++ ||.- =|. .+++||+++|+|+|+.... ..+...+... ..|..+... .+
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCcccc
Confidence 456777788887789999998 6652 333 6899999999999986432 1234445552 578888632 10
Q ss_pred CCcC-HHHHHHHHHHHhcChH---HHHHHHHHHH
Q 017266 317 GIIT-RQEIYNRVKALLNDDG---IKANALKMKE 346 (374)
Q Consensus 317 ~~~~-~~~l~~~i~~~l~~~~---~~~~a~~l~~ 346 (374)
+.-+ .++++++|.++++++. +.++|.+.++
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~ 482 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAE 482 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 0012 7789999999995443 4455554443
No 72
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.70 E-value=0.00099 Score=64.62 Aligned_cols=111 Identities=17% Similarity=0.234 Sum_probs=71.2
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+|+++.+ ++..++..+||...- -++++||+++|+|+|+-.. ......+.+. +.|+.+...
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~~~-~~G~l~~~~- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVDNG-GNGLLLSKD- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhcCC-CcEEEeCCC-
Confidence 35677889999764 455444444776543 3689999999999997543 3345555552 488888654
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESF 365 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 365 (374)
-+.+++.++|.++++|++.+++ +++..++.+.+.-+......+|
T Consensus 362 ---~~~~~la~~I~~ll~~~~~~~~---m~~~ar~~~~~~f~~~~~~~~~ 405 (407)
T cd04946 362 ---PTPNELVSSLSKFIDNEEEYQT---MREKAREKWEENFNASKNYREF 405 (407)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHH---HHHHHHHHHHHHcCHHHhHHHh
Confidence 3789999999999998764433 3333333333344544444444
No 73
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.66 E-value=0.0036 Score=60.12 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=61.6
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc----Cc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC----GW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg----G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
..++.+.+++|+.+ +++.+++ +|... |. .+++||+++|+|+|+.... .+...+.+. ..|..+...
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~~ 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLAEP 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEeCC
Confidence 56778889988654 6888998 77533 32 5788999999999987642 344445553 578755433
Q ss_pred CCCCcCHHHHHHHHHHHhcChHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
.+.+++.++|.++++|++.+
T Consensus 329 ----~d~~~la~~I~~ll~d~~~~ 348 (380)
T PRK15484 329 ----MTSDSIISDINRTLADPELT 348 (380)
T ss_pred ----CCHHHHHHHHHHHHcCHHHH
Confidence 47899999999999998743
No 74
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.61 E-value=0.00039 Score=58.49 Aligned_cols=91 Identities=23% Similarity=0.299 Sum_probs=65.4
Q ss_pred CCCcEEEeecC--hH-HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAP--QE-KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~p--q~-~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.++.+ +. .++..+++ +|+. +..++++||+++|+|+|+. +...+...+.+. +.|+.+..
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~-- 142 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP-- 142 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCC--
Confidence 56788889988 33 38888888 7766 5567999999999999964 344555556663 66888866
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
-+.+++.++|.+++++++++++..+-+
T Consensus 143 ---~~~~~l~~~i~~~l~~~~~~~~l~~~~ 169 (172)
T PF00534_consen 143 ---NDIEELADAIEKLLNDPELRQKLGKNA 169 (172)
T ss_dssp ---TSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 378999999999999886555544433
No 75
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.60 E-value=0.0045 Score=58.69 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=61.3
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.++.++. .++..+++ +|.- |.-.+++||+++|+|+|+... ...+..+.+. ..|..++..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~~-~~G~~~~~~--- 321 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKHG-ETGFLVDVG--- 321 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcCC-CceEEcCCC---
Confidence 4567777877654 48888888 6633 234699999999999998543 3445555552 578776543
Q ss_pred CcCHHHHHHHHHHHhcChHHHHH
Q 017266 318 IITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+.+++.+++.++++|++.+++
T Consensus 322 --~~~~l~~~i~~l~~~~~~~~~ 342 (371)
T cd04962 322 --DVEAMAEYALSLLEDDELWQE 342 (371)
T ss_pred --CHHHHHHHHHHHHhCHHHHHH
Confidence 688999999999988764433
No 76
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.60 E-value=0.032 Score=52.96 Aligned_cols=202 Identities=14% Similarity=0.086 Sum_probs=117.0
Q ss_pred cCccEEEEcCCccCCcchhcc-CCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCC-CceEEEeecccccCCHHH
Q 017266 126 KISNWILCNSFYELDSPACDL-VPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAI-GSVIYVAFGSAAVLSQQQ 203 (374)
Q Consensus 126 ~~~~~~l~ns~~~le~~~~~~-~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~vv~vs~GS~~~~~~~~ 203 (374)
++.++++..|...-+.- +.+ .+++...|-+=..-.+.+ ..+.....|-..-+. + -+.|..+|. .-..+.
T Consensus 176 ~~i~li~aQse~D~~Rf-~~LGa~~v~v~GNlKfd~~~~~------~~~~~~~~~r~~l~~~r-~v~iaaSTH-~GEeei 246 (419)
T COG1519 176 KNIDLILAQSEEDAQRF-RSLGAKPVVVTGNLKFDIEPPP------QLAAELAALRRQLGGHR-PVWVAASTH-EGEEEI 246 (419)
T ss_pred HhcceeeecCHHHHHHH-HhcCCcceEEecceeecCCCCh------hhHHHHHHHHHhcCCCC-ceEEEecCC-CchHHH
Confidence 47788888887665532 332 245777786644322211 122222233222222 3 355555553 334555
Q ss_pred HHHHHHHHhcC--CCCEEEEEcCCCCCcc------ccCCCchhhhh-----cCCCcEEEeecC-hHHhhCCCCC----Cc
Q 017266 204 LEELALGLESL--HQPFLWVVRPDFMNRS------HAKLPDGFVER-----VSDRGKFVEWAP-QEKVLGHPSV----AC 265 (374)
Q Consensus 204 ~~~~~~~l~~~--~~~viw~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~~~~p-q~~lL~~~~~----~~ 265 (374)
..+...+|.+. +...||+-+.+..-.. ...+.-....+ ...++.+.+-+- ...+++-+++ |=
T Consensus 247 ~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGS 326 (419)
T COG1519 247 ILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGS 326 (419)
T ss_pred HHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCc
Confidence 55566666543 3556777554310000 00000000000 123566666554 3345666665 33
Q ss_pred EEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
|+-+||.| .+|++++|+|+|.=|+..-|..-++++.+. |+|+.++ +.+.+.+++..++.|++.+++..+-.
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~~~r~~~~~~~ 397 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE-------DADLLAKAVELLLADEDKREAYGRAG 397 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45699987 899999999999999999999999999996 9999985 35678888988888876555543333
No 77
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.58 E-value=0.00066 Score=63.84 Aligned_cols=137 Identities=18% Similarity=0.179 Sum_probs=82.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC-CCEEEEEcCCCCCccccCCCchh-hhhcCCCcEEEeecChHH---hhCCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH-QPFLWVVRPDFMNRSHAKLPDGF-VERVSDRGKFVEWAPQEK---VLGHPS 262 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~viw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pq~~---lL~~~~ 262 (374)
.+++..|+... ......+++++.+.. ..+++. +... ....+.... .....+|+.+.+|+|+.+ +++.++
T Consensus 192 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~-G~g~---~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad 265 (357)
T cd03795 192 PFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIV-GEGP---LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACD 265 (357)
T ss_pred cEEEEeccccc--ccCHHHHHHHHHhccCcEEEEE-eCCh---hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCC
Confidence 56667777632 233555667766655 444443 3220 000000000 012256888999999753 788888
Q ss_pred CCcEEec---cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 263 VACFLSH---CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 263 ~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
+.++-++ -|. .+++||+++|+|+|+....+....... .. +.|..+.. -+.+++.++|.++++|++.+
T Consensus 266 ~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-----~d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 266 VFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-----GDPAALAEAIRRLLEDPELR 336 (357)
T ss_pred EEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-----CCHHHHHHHHHHHHHCHHHH
Confidence 8333332 343 479999999999998765444332211 23 67877754 36899999999999988643
Q ss_pred H
Q 017266 339 A 339 (374)
Q Consensus 339 ~ 339 (374)
+
T Consensus 337 ~ 337 (357)
T cd03795 337 E 337 (357)
T ss_pred H
Confidence 3
No 78
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.58 E-value=0.0032 Score=61.05 Aligned_cols=84 Identities=19% Similarity=0.239 Sum_probs=62.0
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEec---------cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhccee
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSH---------CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGS 309 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~H---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~ 309 (374)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+-... .....+.+. ..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcCC-CceE
Confidence 56788889999764 7888888 6643 244 6789999999999986543 233445542 5788
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhc-ChHHH
Q 017266 310 QFFPDENGIITRQEIYNRVKALLN-DDGIK 338 (374)
Q Consensus 310 ~l~~~~~~~~~~~~l~~~i~~~l~-~~~~~ 338 (374)
.+... +.+++.++|.++++ |++.+
T Consensus 351 lv~~~-----d~~~la~ai~~l~~~d~~~~ 375 (406)
T PRK15427 351 LVPEN-----DAQALAQRLAAFSQLDTDEL 375 (406)
T ss_pred EeCCC-----CHHHHHHHHHHHHhCCHHHH
Confidence 77653 68899999999998 87643
No 79
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.55 E-value=0.031 Score=55.42 Aligned_cols=89 Identities=18% Similarity=0.210 Sum_probs=61.4
Q ss_pred CCCcEEEeecChHHhhCCCCCCcEEecc----CchhHHHHhhcCcccccccchhhhhhhHHHHHhH----hc-ceeEeec
Q 017266 243 SDRGKFVEWAPQEKVLGHPSVACFLSHC----GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDA----WK-VGSQFFP 313 (374)
Q Consensus 243 ~~~~~~~~~~pq~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~----~g-~G~~l~~ 313 (374)
.+++.+.+...-.++++.+++ +|.-. --++++||+++|+|+|+-.. ......+.+. +| .|..+..
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC
Confidence 467777775555678888888 66442 23689999999999998533 3333334331 12 6777765
Q ss_pred CCCCCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 314 DENGIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
-+.+++.++|.++++|++.+++..
T Consensus 427 -----~d~~~la~ai~~ll~~~~~~~~~~ 450 (475)
T cd03813 427 -----ADPEALARAILRLLKDPELRRAMG 450 (475)
T ss_pred -----CCHHHHHHHHHHHhcCHHHHHHHH
Confidence 378999999999999987554433
No 80
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.44 E-value=0.021 Score=60.65 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=61.6
Q ss_pred CCCcEEEeecChHH---hhCCCC--CCcEEecc---Cc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 243 SDRGKFVEWAPQEK---VLGHPS--VACFLSHC---GW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~--~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
.+++.+.+++++.+ ++..++ ..+||.-. |+ .+++||+++|+|+|+-...+ ....+... ..|+.++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECC
Confidence 46777778887765 555552 12377642 33 68999999999999875432 22333332 56888865
Q ss_pred CCCCCcCHHHHHHHHHHHhcChHHHHHHHH
Q 017266 314 DENGIITRQEIYNRVKALLNDDGIKANALK 343 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 343 (374)
-+.+.|+++|.++++|++.+++..+
T Consensus 622 -----~D~eaLA~AL~~LL~Dpelr~~m~~ 646 (1050)
T TIGR02468 622 -----HDQQAIADALLKLVADKQLWAECRQ 646 (1050)
T ss_pred -----CCHHHHHHHHHHHhhCHHHHHHHHH
Confidence 3688999999999999875444433
No 81
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.44 E-value=0.0062 Score=57.13 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=59.9
Q ss_pred CCCcEEE-eecChH---HhhCCCCCCcEEe--c----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 243 SDRGKFV-EWAPQE---KVLGHPSVACFLS--H----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 243 ~~~~~~~-~~~pq~---~lL~~~~~~~~I~--H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
.+++.+. .|+|+. .++..+++ +|. + +..++++||+++|+|+|+-+..+ ...+... +.|..+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 4677777 458764 47888888 653 2 23468999999999999877544 2334443 6777776
Q ss_pred cCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 313 PDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
.. +.+++.+++.++++|++.+++
T Consensus 318 ~~-----d~~~~~~~l~~l~~~~~~~~~ 340 (366)
T cd03822 318 PG-----DPAALAEAIRRLLADPELAQA 340 (366)
T ss_pred CC-----CHHHHHHHHHHHHcChHHHHH
Confidence 53 688999999999998764433
No 82
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.33 E-value=0.0086 Score=55.81 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=55.5
Q ss_pred CCCcEEEeecCh-HHhhCCCCCCcEEeccCc----hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQ-EKVLGHPSVACFLSHCGW----NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq-~~lL~~~~~~~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.+...+ ..+++.+++ +|..... ++++||+++|+|+|+... ..+...+.+ .|..+..
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~---- 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPP---- 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCC----
Confidence 345566554443 358888988 7765443 799999999999998543 334444433 4555544
Q ss_pred CcCHHHHHHHHHHHhcChH
Q 017266 318 IITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~ 336 (374)
-+.+++.++|.+++++++
T Consensus 317 -~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 317 -GDPEALAEAIEALLADPA 334 (365)
T ss_pred -CCHHHHHHHHHHHHhChH
Confidence 368899999999998875
No 83
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.29 E-value=0.0062 Score=57.15 Aligned_cols=83 Identities=19% Similarity=0.258 Sum_probs=60.0
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe--c--------cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhccee
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS--H--------CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGS 309 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~--H--------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~ 309 (374)
++++.+.+++|+.+ +++.+++ +|. . |.-++++||+++|+|+|+.+..+ ....+.+. ..|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceE
Confidence 46778889997553 7788888 555 2 23478999999999999876432 22334442 4787
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 310 QFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 310 ~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
.+... +.+++.++|.++++++..
T Consensus 308 ~~~~~-----~~~~l~~~i~~~~~~~~~ 330 (355)
T cd03799 308 LVPPG-----DPEALADAIERLLDDPEL 330 (355)
T ss_pred EeCCC-----CHHHHHHHHHHHHhCHHH
Confidence 77543 789999999999988864
No 84
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.29 E-value=0.0081 Score=57.97 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=63.3
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEe---ccCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLS---HCGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|.. .+++.+++ +|. +-|. .+++||+++|+|+|+.... .....+.+. +.|+.+..
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVADG-ETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhccC-CceEECCC--
Confidence 4678888998865 37889998 663 2233 5899999999999986542 333445553 67877765
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANALK 343 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 343 (374)
-+.+++.++|.+++++++.+++..+
T Consensus 353 ---~d~~~la~~i~~~l~~~~~~~~~~~ 377 (405)
T TIGR03449 353 ---HDPADWADALARLLDDPRTRIRMGA 377 (405)
T ss_pred ---CCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3688999999999998765444333
No 85
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.29 E-value=0.011 Score=57.39 Aligned_cols=85 Identities=12% Similarity=0.165 Sum_probs=59.5
Q ss_pred CCcEEEeecChHH---hhCCCCCCcEEeccCc------hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 244 DRGKFVEWAPQEK---VLGHPSVACFLSHCGW------NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 244 ~~~~~~~~~pq~~---lL~~~~~~~~I~HgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
+++.+.+|+|+.+ +++.+++.++.++.+. +.+.|++++|+|+|+....+.. ... +.+ +.|+.+...
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~-~i~--~~G~~~~~~ 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQ-LVE--GIGVCVEPE 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHH-HHh--CCcEEeCCC
Confidence 4688889998654 7889998555555432 2468999999999987643211 112 222 578877653
Q ss_pred CCCCcCHHHHHHHHHHHhcChHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
+.++++++|.++++|++.+
T Consensus 359 -----d~~~la~~i~~l~~~~~~~ 377 (412)
T PRK10307 359 -----SVEALVAAIAALARQALLR 377 (412)
T ss_pred -----CHHHHHHHHHHHHhCHHHH
Confidence 6889999999999887643
No 86
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.26 E-value=0.029 Score=52.56 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=72.9
Q ss_pred CCceEEEeeccc-c---cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEE-eecChHHhhC
Q 017266 185 IGSVIYVAFGSA-A---VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFV-EWAPQEKVLG 259 (374)
Q Consensus 185 ~~~vv~vs~GS~-~---~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pq~~lL~ 259 (374)
+.+.|++-+-+. + ......+.++++.|++.+..++...+.. ..++-+ ++. ++.+. +-+.-.++|.
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~-------~~~~~~-~~~--~~~i~~~~vd~~~Ll~ 247 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE-------DQRELF-EKY--GVIIPPEPVDGLDLLY 247 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc-------chhhHH-hcc--CccccCCCCCHHHHHH
Confidence 345777777664 1 1234557788999988877655444322 111111 111 12333 4456668999
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
++++ +|+-|| ....||...|+|.|.+ +.++-...-+.+.+. |. .... -+.+++.+.+++.+
T Consensus 248 ~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~~-----~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 248 YADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYHS-----TDPDEIVEYVRKNL 308 (335)
T ss_pred hcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEec-----CCHHHHHHHHHHhh
Confidence 9999 999777 7788999999999974 112211222345553 54 3332 35666666554433
No 87
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.25 E-value=0.048 Score=53.11 Aligned_cols=80 Identities=23% Similarity=0.200 Sum_probs=54.7
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe-----ccCchhHHHHhhcCcccccccchhhhhhhHHHHH---hHhcceeEe
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS-----HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYIC---DAWKVGSQF 311 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~---~~~g~G~~l 311 (374)
.+++.+.+++|+.+ +|+.+++ +|+ |-| .+++||+++|+|+|+.-..+. ....+. .. ..|+..
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEe
Confidence 57888889988664 7888888 554 223 488999999999997543221 111122 22 467664
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 312 FPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
-+.++++++|.+++++++
T Consensus 377 -------~d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 377 -------STAEEYAEAIEKILSLSE 394 (419)
T ss_pred -------CCHHHHHHHHHHHHhCCH
Confidence 268899999999998654
No 88
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.24 E-value=0.0055 Score=58.28 Aligned_cols=133 Identities=17% Similarity=0.257 Sum_probs=78.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCE-EEEEcCCCCCccccCCCchhhh--hcCCCcEEEeecCh--H---HhhC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPF-LWVVRPDFMNRSHAKLPDGFVE--RVSDRGKFVEWAPQ--E---KVLG 259 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~v-iw~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq--~---~lL~ 259 (374)
.+++..|.......+.+..+++++......+ ++.+|.... .+.+ ....+ ..++++.+.+|.++ . +.++
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~---~~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~ 256 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSD---FEKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQKIK 256 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCcc---HHHH-HHHHHHcCCCCeEEEecccCCcHHHHHHHHh
Confidence 4556677654322344556666665543222 334543310 0111 11111 12567888888753 2 2455
Q ss_pred CCCCCcEEec----cCchhHHHHhhcCccccccc-chhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 260 HPSVACFLSH----CGWNSSIEGLSMGVPFLCWP-YFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 260 ~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
.+++ +|.. |--++++||+++|+|+|+.- ..+ ....+.+. ..|..+.. -+.+++.++|.++++|
T Consensus 257 ~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~-----~d~~~la~~i~~l~~~ 324 (359)
T PRK09922 257 NVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTP-----GNIDEFVGKLNKVISG 324 (359)
T ss_pred cCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECC-----CCHHHHHHHHHHHHhC
Confidence 6677 6643 22479999999999999864 322 22344442 56887755 3789999999999988
Q ss_pred hH
Q 017266 335 DG 336 (374)
Q Consensus 335 ~~ 336 (374)
++
T Consensus 325 ~~ 326 (359)
T PRK09922 325 EV 326 (359)
T ss_pred cc
Confidence 86
No 89
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.23 E-value=0.0087 Score=56.06 Aligned_cols=200 Identities=13% Similarity=0.088 Sum_probs=102.3
Q ss_pred CEEeec-ccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCC---HHHHHHHHHHHhc--CCCCEEEEE
Q 017266 149 NILTIG-PLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLS---QQQLEELALGLES--LHQPFLWVV 222 (374)
Q Consensus 149 ~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~---~~~~~~~~~~l~~--~~~~viw~~ 222 (374)
...||| |+...-+-. +......+-+....++.++.+-.||..+-- ...+.+.++.|+. .+.+|+.-+
T Consensus 157 ~~~yVGHpl~d~i~~~-------~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~ 229 (381)
T COG0763 157 PCTYVGHPLADEIPLL-------PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPL 229 (381)
T ss_pred CeEEeCChhhhhcccc-------ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 488999 665432111 122223333444455569999999984321 2233334444432 346666554
Q ss_pred cCCCCCccccCCCchhhhhcCCCc-EEEeec-C-h-HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccch-hhhhhh
Q 017266 223 RPDFMNRSHAKLPDGFVERVSDRG-KFVEWA-P-Q-EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF-VDQYQN 297 (374)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-p-q-~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~-~DQ~~n 297 (374)
-+.. ........ ...+. ...-++ + + .+++..+++ .+.-+|. -++|+..+|+|||+.=-. .=-+.-
T Consensus 230 ~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~i 299 (381)
T COG0763 230 VNAK----YRRIIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFI 299 (381)
T ss_pred CcHH----HHHHHHHH---hhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHH
Confidence 4330 00000111 11111 011111 2 2 236777777 6666664 578999999999874211 111222
Q ss_pred HHHHHhHhcc--------eeEe----ecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHH
Q 017266 298 RNYICDAWKV--------GSQF----FPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESF 365 (374)
Q Consensus 298 a~~v~~~~g~--------G~~l----~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 365 (374)
|++..+- .. |..+ -.++ .+++.|.+++.+++.|+.-++..++--..++..+++++++..+...+
T Consensus 300 ak~lvk~-~yisLpNIi~~~~ivPEliq~~---~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~v 375 (381)
T COG0763 300 AKRLVKL-PYVSLPNILAGREIVPELIQED---CTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAV 375 (381)
T ss_pred HHHhccC-CcccchHHhcCCccchHHHhhh---cCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3333331 21 1111 1123 89999999999999998544444444445555555566666666655
Q ss_pred HHHH
Q 017266 366 ISQL 369 (374)
Q Consensus 366 v~~~ 369 (374)
++.+
T Consensus 376 l~~~ 379 (381)
T COG0763 376 LELL 379 (381)
T ss_pred HHHh
Confidence 5543
No 90
>PLN02949 transferase, transferring glycosyl groups
Probab=97.22 E-value=0.028 Score=55.37 Aligned_cols=79 Identities=15% Similarity=0.076 Sum_probs=51.1
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe---ccCc-hhHHHHhhcCcccccccchh---hhhhhHHHHHhHhcceeEee
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS---HCGW-NSSIEGLSMGVPFLCWPYFV---DQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~~g~G~~l~ 312 (374)
.+++.+.+++|+.+ +|+.+++ +|. +=|. .+++||+++|+|+|+....+ |.-.+. ... ..|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~---~~g-~tG~l~- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE---DGQ-QTGFLA- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC---CCC-cccccC-
Confidence 57788889988654 7888887 663 2233 37999999999999875432 111100 000 123332
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC
Q 017266 313 PDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
-+.++++++|.+++++
T Consensus 407 ------~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 ------TTVEEYADAILEVLRM 422 (463)
T ss_pred ------CCHHHHHHHHHHHHhC
Confidence 1678999999999984
No 91
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.11 E-value=0.018 Score=54.90 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=58.2
Q ss_pred CCcEEEeecCh-HHhhCCCCCCcEE--ec--cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 244 DRGKFVEWAPQ-EKVLGHPSVACFL--SH--CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 244 ~~~~~~~~~pq-~~lL~~~~~~~~I--~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
+++.+.++..+ ..++..+++ +| ++ |--++++||+++|+|+|+-... .+...+.+. ..|..+...
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~~~---- 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVPPG---- 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeCCC----
Confidence 45555555443 358899998 66 33 3347999999999999986542 344555552 568777653
Q ss_pred cCHHHHHHHHHHHhcChHHH
Q 017266 319 ITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~~~~ 338 (374)
+.+++.++|.+++++++.+
T Consensus 324 -d~~~la~~i~~l~~~~~~~ 342 (374)
T TIGR03088 324 -DAVALARALQPYVSDPAAR 342 (374)
T ss_pred -CHHHHHHHHHHHHhCHHHH
Confidence 6789999999999887643
No 92
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.07 E-value=0.019 Score=53.99 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=59.0
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEeccC----chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.++..+. .+++.+++ +|.-.. .++++||+++|+|+|+. |...+...+.+ .|..+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~~---- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVPI---- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeCC----
Confidence 4567777776543 58888988 665432 47899999999999974 33444444443 3444443
Q ss_pred CcCHHHHHHHHHHHhc-ChHHHHHHHHH
Q 017266 318 IITRQEIYNRVKALLN-DDGIKANALKM 344 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~-~~~~~~~a~~l 344 (374)
-+.+++.++|.++++ ++.+++...+.
T Consensus 311 -~~~~~~~~~i~~ll~~~~~~~~~~~~~ 337 (360)
T cd04951 311 -SDPEALANKIDEILKMSGEERDIIGAR 337 (360)
T ss_pred -CCHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 378899999999984 55555544443
No 93
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.06 E-value=0.0061 Score=58.02 Aligned_cols=85 Identities=19% Similarity=0.152 Sum_probs=60.6
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEecc--CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCc
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSHC--GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGII 319 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~Hg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 319 (374)
.+++.+.++.++. .++..+++-++.++. ...+++||+++|+|+|+..... .+...+.+. ..|..+.. -
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~-----~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK-----G 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC-----C
Confidence 4566777776655 488999985555543 3468999999999999864321 133445553 67888765 3
Q ss_pred CHHHHHHHHHHHhcChH
Q 017266 320 TRQEIYNRVKALLNDDG 336 (374)
Q Consensus 320 ~~~~l~~~i~~~l~~~~ 336 (374)
+.+++.++|.++++|++
T Consensus 331 d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 331 DIEALAEAIIELLNDPK 347 (372)
T ss_pred cHHHHHHHHHHHHcCHH
Confidence 78999999999999875
No 94
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.01 E-value=0.027 Score=54.26 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=59.9
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEE--ec--cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFL--SH--CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDEN 316 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I--~H--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 316 (374)
..++.+.+++++. .+++++++ +| ++ .|. +.++||+++|+|+|+.+...+.. .+.. |.|+.+. .
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~--~- 347 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA--A- 347 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC--C-
Confidence 3567888998865 48889998 66 33 354 46999999999999987533221 1222 6677664 2
Q ss_pred CCcCHHHHHHHHHHHhcChHHHHH
Q 017266 317 GIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+.+++.++|.++++|++.+++
T Consensus 348 ---~~~~la~ai~~ll~~~~~~~~ 368 (397)
T TIGR03087 348 ---DPADFAAAILALLANPAEREE 368 (397)
T ss_pred ---CHHHHHHHHHHHHcCHHHHHH
Confidence 689999999999998864433
No 95
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.96 E-value=0.017 Score=54.13 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=60.9
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|+.+ +++.+++ +|.- +..++++||+++|+|+|+-...+ ....+ . ..|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~-- 320 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP-- 320 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC--
Confidence 57778889998764 7888887 4432 23468999999999999855421 11122 2 23445443
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKANALKMKE 346 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~ 346 (374)
-+.+++.++|.+++.|++.+.+..+-+.
T Consensus 321 ---~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 321 ---LDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---CCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3688999999999999886665554443
No 96
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.95 E-value=0.011 Score=57.45 Aligned_cols=76 Identities=16% Similarity=0.268 Sum_probs=54.4
Q ss_pred CcEEE-eecChHH---hhCCCCCCcEEe----ccC---chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 245 RGKFV-EWAPQEK---VLGHPSVACFLS----HCG---WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 245 ~~~~~-~~~pq~~---lL~~~~~~~~I~----HgG---~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
++.+. +|+|..+ +|+.+++ ++. .-| -+.++||+++|+|+|+... ......+.+. +.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-
Confidence 44444 6887554 6888998 663 112 3579999999999998543 3444556663 6888872
Q ss_pred CCCCCcCHHHHHHHHHHHhcC
Q 017266 314 DENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~ 334 (374)
+.+++.++|.++++|
T Consensus 367 ------d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 ------DSEELAEQLIDLLSN 381 (415)
T ss_pred ------CHHHHHHHHHHHHhc
Confidence 578999999999998
No 97
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.87 E-value=0.0016 Score=61.66 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=79.1
Q ss_pred CCCceEEEeecccccCC-H---HHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---
Q 017266 184 AIGSVIYVAFGSAAVLS-Q---QQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE--- 255 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~-~---~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~--- 255 (374)
.+++.++|++=...... . ..+.+++++|.+. +.++||.+.+... ....+ .....+. +++++.+-++..
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~--~~~~i-~~~l~~~-~~v~~~~~l~~~~~l 253 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR--GSDII-IEKLKKY-DNVRLIEPLGYEEYL 253 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH--HHHHH-HHHHTT--TTEEEE----HHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch--HHHHH-HHHhccc-CCEEEECCCCHHHHH
Confidence 45568999885544444 3 4555666677665 7789999874310 00001 1111222 477887665544
Q ss_pred HhhCCCCCCcEEeccCchhHH-HHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 256 KVLGHPSVACFLSHCGWNSSI-EGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 256 ~lL~~~~~~~~I~HgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
.+|+++++ +|+-.| ++. ||.+.|+|.|.+=..++.+. -+. .|..+.+. .+.++|.+++++++.+
T Consensus 254 ~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe---~r~--~~~nvlv~------~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 254 SLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE---GRE--RGSNVLVG------TDPEAIIQAIEKALSD 318 (346)
T ss_dssp HHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH---HHH--TTSEEEET------SSHHHHHHHHHHHHH-
T ss_pred HHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH---HHh--hcceEEeC------CCHHHHHHHHHHHHhC
Confidence 58889998 999999 666 99999999999922222222 122 25555532 5899999999999987
Q ss_pred hHHHHHHHH
Q 017266 335 DGIKANALK 343 (374)
Q Consensus 335 ~~~~~~a~~ 343 (374)
....++.+.
T Consensus 319 ~~~~~~~~~ 327 (346)
T PF02350_consen 319 KDFYRKLKN 327 (346)
T ss_dssp HHHHHHHHC
T ss_pred hHHHHhhcc
Confidence 544444443
No 98
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.84 E-value=0.055 Score=51.76 Aligned_cols=180 Identities=17% Similarity=0.140 Sum_probs=91.0
Q ss_pred ccCccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeeccccc-CCHHH
Q 017266 125 LKISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAV-LSQQQ 203 (374)
Q Consensus 125 ~~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~ 203 (374)
++++|.++..|....+.- ....+++..+..-...+.-.+ .. ..... .+.+...++ .+++..|+... ...+.
T Consensus 151 ~~~ad~vi~~S~~l~~~~-~~~~~~i~~i~ngvd~~~f~~--~~--~~~~~-~~~~~~~~~--~~i~y~G~l~~~~d~~l 222 (373)
T cd04950 151 LKRADLVFTTSPSLYEAK-RRLNPNVVLVPNGVDYEHFAA--AR--DPPPP-PADLAALPR--PVIGYYGAIAEWLDLEL 222 (373)
T ss_pred HHhCCEEEECCHHHHHHH-hhCCCCEEEcccccCHHHhhc--cc--ccCCC-hhHHhcCCC--CEEEEEeccccccCHHH
Confidence 457898887777554432 334466666553322110000 00 00000 011222222 45556788743 33344
Q ss_pred HHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hhCCCCCCcEE------eccCc-h
Q 017266 204 LEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VLGHPSVACFL------SHCGW-N 273 (374)
Q Consensus 204 ~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~~~~~~~~I------~HgG~-~ 273 (374)
+.+++.. ..+.++++ +|.... ... ...+ ...+|+.+.+++|..+ .++++++.++- +.++. +
T Consensus 223 l~~la~~--~p~~~~vl-iG~~~~---~~~-~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~ 293 (373)
T cd04950 223 LEALAKA--RPDWSFVL-IGPVDV---SID-PSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPL 293 (373)
T ss_pred HHHHHHH--CCCCEEEE-ECCCcC---ccC-hhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcc
Confidence 4443332 23455544 443200 000 0111 1136889999998665 68888883332 22332 4
Q ss_pred hHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 274 SSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 274 s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
-++|++++|+|+|..++. ..+.. +.|..+.. -+.+++.++|.+++.++
T Consensus 294 Kl~EylA~G~PVVat~~~-------~~~~~--~~~~~~~~-----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 294 KLFEYLAAGKPVVATPLP-------EVRRY--EDEVVLIA-----DDPEEFVAAIEKALLED 341 (373)
T ss_pred hHHHHhccCCCEEecCcH-------HHHhh--cCcEEEeC-----CCHHHHHHHHHHHHhcC
Confidence 589999999999987631 22222 22333322 26899999999976544
No 99
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.84 E-value=0.048 Score=52.06 Aligned_cols=140 Identities=14% Similarity=0.173 Sum_probs=78.9
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCccccCCCchhhhh---c---CCCcEEE-eecChH---
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESL--HQPFLWVVRPDFMNRSHAKLPDGFVER---V---SDRGKFV-EWAPQE--- 255 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~viw~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~-~~~pq~--- 255 (374)
.+++..|.... .+.+..+++++.+. +..+++..+.... ..+.+.+.+. . .+++... ++++..
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDT----PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCc----HHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 45556677632 23345555665543 4565555443310 0011111111 1 1234433 667754
Q ss_pred HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCC-CCcCHHHHHHHHHH
Q 017266 256 KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDEN-GIITRQEIYNRVKA 330 (374)
Q Consensus 256 ~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~-~~~~~~~l~~~i~~ 330 (374)
.++.++++ +|.- +.-.+++||+++|+|+|+... ....+.+.+. +.|..+...+. ..-..+++.++|.+
T Consensus 276 ~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 276 ELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDG-ETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCC-CceEEcCCCCCcccchHHHHHHHHHH
Confidence 37888998 7653 223578999999999998654 3345555553 67888876430 00112789999999
Q ss_pred HhcChHHHHH
Q 017266 331 LLNDDGIKAN 340 (374)
Q Consensus 331 ~l~~~~~~~~ 340 (374)
+++|++.+++
T Consensus 349 l~~~~~~~~~ 358 (388)
T TIGR02149 349 LLADPELAKK 358 (388)
T ss_pred HHhCHHHHHH
Confidence 9998864433
No 100
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.81 E-value=0.013 Score=56.13 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=59.7
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|+. .++..+++ ++... | -.+++||+++|+|+|+.-. ......+.+. +.|+.+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhccC-CceEEeC---
Confidence 5688899999876 47888888 66422 2 2578999999999998643 2233445552 5677763
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~ 339 (374)
.+.+++.++|.+++++++.++
T Consensus 349 ---~~~~~~a~~i~~l~~~~~~~~ 369 (392)
T cd03805 349 ---PTPEEFAEAMLKLANDPDLAD 369 (392)
T ss_pred ---CCHHHHHHHHHHHHhChHHHH
Confidence 257889999999999886433
No 101
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.80 E-value=0.0035 Score=50.29 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=49.1
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEec--cC-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSH--CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~H--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
..++.+.+|++.. ++++.+++.+..+. .| -+++.|++++|+|+|+.+.. ....++.. +.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~-~----- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLV-A----- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE--T-----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEE-C-----
Confidence 4588888988644 38899999665543 23 38999999999999997661 11222333 777776 2
Q ss_pred cCHHHHHHHHHHHhcC
Q 017266 319 ITRQEIYNRVKALLND 334 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~ 334 (374)
-+.+++.++|.++++|
T Consensus 120 ~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 NDPEELAEAIERLLND 135 (135)
T ss_dssp T-HHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHhcC
Confidence 3899999999999865
No 102
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.79 E-value=0.043 Score=56.60 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=64.0
Q ss_pred CCCcEEEeecChHH-hhCCCCCCcEEe---ccCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQEK-VLGHPSVACFLS---HCGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~~-lL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.+|.++.. +|..+++ ||. +-|. ++++||+++|+|+|+... ......+.+. ..|+.+...+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~----gG~~EiV~dg-~~GlLv~~~d-- 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLA----GGAGEAVQEG-VTGLTLPADT-- 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECC----CChHHHccCC-CCEEEeCCCC--
Confidence 47788888877654 8888888 664 4554 789999999999998654 2344555552 5798887654
Q ss_pred CcCHHHHHHHHHHHh----cChHHHHHHHHHH
Q 017266 318 IITRQEIYNRVKALL----NDDGIKANALKMK 345 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l----~~~~~~~~a~~l~ 345 (374)
.+.+++.+++.+++ .++.+++++++..
T Consensus 644 -~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 644 -VTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred -CChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 55566666665554 4566777665554
No 103
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.78 E-value=0.022 Score=53.45 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=76.8
Q ss_pred ceEEEeeccccc-CCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCccccCCCchhh---h--hcCCCcEEEeecChH-Hh
Q 017266 187 SVIYVAFGSAAV-LSQQQLEELALGLESL--HQPFLWVVRPDFMNRSHAKLPDGFV---E--RVSDRGKFVEWAPQE-KV 257 (374)
Q Consensus 187 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~viw~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~pq~-~l 257 (374)
..+++..|.... -..+.+-+.+..+.+. +.++ +.+|.... .......+. . ...+++.+.+|.+.. .+
T Consensus 185 ~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l-~ivG~~~~---~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (355)
T cd03819 185 KPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHL-LIVGDAQG---RRFYYAELLELIKRLGLQDRVTFVGHCSDMPAA 260 (355)
T ss_pred ceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEE-EEEECCcc---cchHHHHHHHHHHHcCCcceEEEcCCcccHHHH
Confidence 356667777632 2344455555555543 3343 34443310 001111111 1 124567888885544 48
Q ss_pred hCCCCCCcEEec--cC-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc-
Q 017266 258 LGHPSVACFLSH--CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN- 333 (374)
Q Consensus 258 L~~~~~~~~I~H--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~- 333 (374)
++.+++.++-++ -| -++++||+++|+|+|+.... .....+.+. +.|+.+.. -+.+++.++|.+++.
T Consensus 261 l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~-----~~~~~l~~~i~~~~~~ 330 (355)
T cd03819 261 YALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPG-ETGLLVPP-----GDAEALAQALDQILSL 330 (355)
T ss_pred HHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCC-CceEEeCC-----CCHHHHHHHHHHHHhh
Confidence 888998333231 23 36999999999999976432 334445552 57888765 378899999965553
Q ss_pred ChH
Q 017266 334 DDG 336 (374)
Q Consensus 334 ~~~ 336 (374)
+++
T Consensus 331 ~~~ 333 (355)
T cd03819 331 LPE 333 (355)
T ss_pred CHH
Confidence 554
No 104
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.74 E-value=0.0089 Score=56.30 Aligned_cols=108 Identities=15% Similarity=0.280 Sum_probs=75.6
Q ss_pred CCCcEEEeecChHHh---hCCCCCCcEEecc-------Cc------hhHHHHhhcCcccccccchhhhhhhHHHHHhHhc
Q 017266 243 SDRGKFVEWAPQEKV---LGHPSVACFLSHC-------GW------NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK 306 (374)
Q Consensus 243 ~~~~~~~~~~pq~~l---L~~~~~~~~I~Hg-------G~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 306 (374)
.+|+.+.+|+|+.++ |+. +.+++...- .+ +-+.+.+++|+|+|+.+ +...+..|.+. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-C
Confidence 467889999998764 444 443333221 11 22677899999999864 45566777775 8
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHhhccCCChHHHHHHHHH
Q 017266 307 VGSQFFPDENGIITRQEIYNRVKALLNDD--GIKANALKMKEMARKSLGEGGSSFRNFESFIS 367 (374)
Q Consensus 307 ~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~ 367 (374)
+|+.++ +.+++.+++.++..+. +|++|++++++.+++ |.--.+++.+.+.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 999985 3467888888754322 389999999999988 6666777776665
No 105
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.69 E-value=0.026 Score=53.08 Aligned_cols=90 Identities=17% Similarity=0.091 Sum_probs=61.4
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++.+.++..+. .++..+++ +|.- |--++++||+++|+|+|+-...+ ....+.+ +.|.....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~---- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLD---- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCC----
Confidence 4677777775443 58888888 6643 33578999999999999765433 2333333 45545433
Q ss_pred CcCHHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 318 IITRQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
-+.++++++|.++++|++.+++....+
T Consensus 316 -~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 316 -ESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred -CCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 257999999999999998665554433
No 106
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.65 E-value=0.066 Score=51.65 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=54.0
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc---Cc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC---GW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+|+|+.+ +++.+++ +|.-. |. .+++||+++|+|+|+-+..+ ....+.+ |.+... .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~-~-- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLA-E-- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--Cceeec-C--
Confidence 46678889988654 7888888 66422 33 49999999999999876542 2233333 434332 2
Q ss_pred CCCcCHHHHHHHHHHHhcCh
Q 017266 316 NGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~ 335 (374)
-+.+++.+++.+++++.
T Consensus 318 ---~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 ---PDVESIVRKLEEAISIL 334 (398)
T ss_pred ---CCHHHHHHHHHHHHhCh
Confidence 26788999999998754
No 107
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.43 E-value=0.046 Score=54.05 Aligned_cols=120 Identities=20% Similarity=0.257 Sum_probs=80.9
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhh------cCCCcEEEeecChHH----
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVER------VSDRGKFVEWAPQEK---- 256 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~pq~~---- 256 (374)
-+||.+|--...++++.++..++-|.+.+..++|..+.+...+ .++... -++++.+.+-+.-.+
T Consensus 759 ~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge------~rf~ty~~~~Gl~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 759 AVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE------QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred eEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch------HHHHHHHHHhCCCccceeeccccchHHHHHh
Confidence 4889888888889999999999999999999999998763111 122111 156666655443222
Q ss_pred -hhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 257 -VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 257 -lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
.|..-.+.-+.+. |..|.++.+++|||||.+|...--..-|...--++|+|..+-+
T Consensus 833 ~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak 889 (966)
T KOG4626|consen 833 GQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK 889 (966)
T ss_pred hhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh
Confidence 2333333335664 6789999999999999999865444444333333699886644
No 108
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.042 Score=53.92 Aligned_cols=120 Identities=21% Similarity=0.271 Sum_probs=83.9
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhh---h--c-CCCcEEEeecChHH-
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVE---R--V-SDRGKFVEWAPQEK- 256 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~~~~pq~~- 256 (374)
+++-+||++|+......++.+..-..-|+..+-.++|..+.+.. +.....+.+ + + +++.++.+-.|...
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~----~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD----AEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc----HHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 34459999999999999999999999999999999999887521 111112211 1 1 35556666665443
Q ss_pred --hhCCCCCCcEEe---ccCchhHHHHhhcCcccccccchhhhhh--hHHHHHhHhcceeEe
Q 017266 257 --VLGHPSVACFLS---HCGWNSSIEGLSMGVPFLCWPYFVDQYQ--NRNYICDAWKVGSQF 311 (374)
Q Consensus 257 --lL~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~v~~~~g~G~~l 311 (374)
=++-+++ |+- -||..|..|++..|||+|.++ ++|+. |+..++...|+--.+
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 4455666 764 689999999999999999986 78876 555555544543333
No 109
>PLN00142 sucrose synthase
Probab=96.35 E-value=1.5 Score=45.95 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=53.6
Q ss_pred CCCcEEEe----ecChHHhhC----CCCCCcEEec---cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeE
Q 017266 243 SDRGKFVE----WAPQEKVLG----HPSVACFLSH---CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQ 310 (374)
Q Consensus 243 ~~~~~~~~----~~pq~~lL~----~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~ 310 (374)
.+++.+.+ ..+..+++. .+++ ||.- =|. .+++||+++|+|+|+-.. ......|.+. ..|..
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdv----GG~~EIV~dG-~tG~L 713 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQ----GGPAEIIVDG-VSGFH 713 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEE
Confidence 35555544 233344443 2345 7753 344 489999999999998543 3344555553 57888
Q ss_pred eecCCCCCcCHHHHHHHHHHH----hcChHHHHHHH
Q 017266 311 FFPDENGIITRQEIYNRVKAL----LNDDGIKANAL 342 (374)
Q Consensus 311 l~~~~~~~~~~~~l~~~i~~~----l~~~~~~~~a~ 342 (374)
++.. +.+++.++|.++ +.|++.+++..
T Consensus 714 V~P~-----D~eaLA~aI~~lLekLl~Dp~lr~~mg 744 (815)
T PLN00142 714 IDPY-----HGDEAANKIADFFEKCKEDPSYWNKIS 744 (815)
T ss_pred eCCC-----CHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 8764 577777777654 56776554433
No 110
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.29 E-value=0.058 Score=50.13 Aligned_cols=129 Identities=12% Similarity=0.056 Sum_probs=75.8
Q ss_pred EEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhh--cCCCcEEEeecChHH---hhCCCCC
Q 017266 189 IYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVER--VSDRGKFVEWAPQEK---VLGHPSV 263 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~~---lL~~~~~ 263 (374)
+.+..|... ..+....+++++.+.+.++++. |.... .........+. ..+++.+.+++++.+ +++.+++
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~-G~~~~---~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLA-GPVSD---PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEE-eCCCC---HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 444557662 2233456777777777776654 43310 00000111111 257788889998754 6788888
Q ss_pred CcEEec--cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 264 ACFLSH--CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 264 ~~~I~H--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
-++-+. -|. .+++||+++|+|+|+.... .+...+.+. ..|+.+. ..+++.++|.+++..+
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~~-~~g~l~~-------~~~~l~~~l~~l~~~~ 309 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVEDG-VTGFLVD-------SVEELAAAVARADRLD 309 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeCC-CcEEEeC-------CHHHHHHHHHHHhccH
Confidence 333232 343 5899999999999976542 233344431 3677663 2788999999886543
No 111
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.23 E-value=0.084 Score=49.60 Aligned_cols=81 Identities=20% Similarity=0.185 Sum_probs=52.5
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEeccCc-----hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHCGW-----NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~HgG~-----~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
.+++.+.+++++.+ ++..+++ ++.+.-. ++++||+++|+|+|+....+ +...+. ..|..+...
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~---~~g~~~~~~ 317 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLG---DKAIYFKVG 317 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeec---CCeeEecCc
Confidence 57788889998764 6667777 6554433 57999999999999865432 111111 123333322
Q ss_pred CCCCcCHHHHHHHHHHHhcChHHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~~~~ 339 (374)
+ .+.++|.++++|++.++
T Consensus 318 -----~--~l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 318 -----D--DLASLLEELEADPEEVS 335 (363)
T ss_pred -----h--HHHHHHHHHHhCHHHHH
Confidence 1 29999999998875433
No 112
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.11 E-value=0.23 Score=47.36 Aligned_cols=85 Identities=20% Similarity=0.144 Sum_probs=56.0
Q ss_pred CCCcEEEeec--ChH---HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 243 SDRGKFVEWA--PQE---KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 243 ~~~~~~~~~~--pq~---~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
.+++.+..+. ++. .+++.+++ |+... | -.+++||+++|+|+|+.... .....+.+. ..|+.+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~-~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDG-ETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccC-CceEEeC-
Confidence 4567777765 433 47788888 77543 2 35899999999999986542 223334442 5676553
Q ss_pred CCCCCcCHHHHHHHHHHHhcChHHHHHH
Q 017266 314 DENGIITRQEIYNRVKALLNDDGIKANA 341 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l~~~~~~~~a 341 (374)
+.+.+.++|.+++++++.++..
T Consensus 323 ------~~~~~a~~i~~ll~~~~~~~~~ 344 (372)
T cd03792 323 ------TVEEAAVRILYLLRDPELRRKM 344 (372)
T ss_pred ------CcHHHHHHHHHHHcCHHHHHHH
Confidence 3456777999999888755443
No 113
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.00 E-value=0.84 Score=46.77 Aligned_cols=77 Identities=17% Similarity=0.206 Sum_probs=52.0
Q ss_pred cEEEeecChH-HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcC
Q 017266 246 GKFVEWAPQE-KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 246 ~~~~~~~pq~-~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
+.+.++.++. .+++.+++ ||.-+ | -++++||+++|+|+|+....+... +... +.|. +. -+
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nGl-l~------~D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNCL-TY------KT 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCeE-ec------CC
Confidence 4555666655 48888888 77632 3 368999999999999876543221 2221 2333 22 26
Q ss_pred HHHHHHHHHHHhcChHH
Q 017266 321 RQEIYNRVKALLNDDGI 337 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~~~ 337 (374)
.+++.++|.+++.++..
T Consensus 668 ~EafAeAI~~LLsd~~~ 684 (794)
T PLN02501 668 SEDFVAKVKEALANEPQ 684 (794)
T ss_pred HHHHHHHHHHHHhCchh
Confidence 88999999999988763
No 114
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.93 E-value=0.2 Score=49.96 Aligned_cols=65 Identities=23% Similarity=0.183 Sum_probs=47.2
Q ss_pred CCCcEEEeecChH-HhhCCCCCCcEEec---cC-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 243 SDRGKFVEWAPQE-KVLGHPSVACFLSH---CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 243 ~~~~~~~~~~pq~-~lL~~~~~~~~I~H---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
.+++.+.+|..+. .+|+.+++ ||.. -| -++++||+++|+|+|+... ..+...+.+. ..|+.++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEECCC
Confidence 4778888886544 47888998 8753 34 4799999999999997654 3455666663 678888764
No 115
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.83 E-value=0.15 Score=49.60 Aligned_cols=177 Identities=14% Similarity=0.171 Sum_probs=100.1
Q ss_pred hhhhhcCCCCceEEEeecccccC------C-H---HHHHHHHHHHhcCCCCEEEEEcCCCCCc-cccCC--CchhhhhcC
Q 017266 177 LSWLDKQAIGSVIYVAFGSAAVL------S-Q---QQLEELALGLESLHQPFLWVVRPDFMNR-SHAKL--PDGFVERVS 243 (374)
Q Consensus 177 ~~~l~~~~~~~vv~vs~GS~~~~------~-~---~~~~~~~~~l~~~~~~viw~~~~~~~~~-~~~~~--~~~~~~~~~ 243 (374)
..|+....++++|-|+....... . . +.+.++++.|.+.++++++..-...... ...+. ...+.+.++
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 34554434445787776544211 2 2 2344556666667888886643210000 00000 112223332
Q ss_pred --CCcEEE--eecChH--HhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeE-eecCCC
Q 017266 244 --DRGKFV--EWAPQE--KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQ-FFPDEN 316 (374)
Q Consensus 244 --~~~~~~--~~~pq~--~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~ 316 (374)
.+.++. ++-+.. .+++++++ +|..= .-++.=|+.+|||.+.+++ |+....- +.+ +|..-. ++..+
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K~~~~-~~~-lg~~~~~~~~~~- 376 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHKSAGI-MQQ-LGLPEMAIDIRH- 376 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHHHHHH-HHH-cCCccEEechhh-
Confidence 233443 233433 58888887 88643 2356668899999999998 4333332 344 677654 55555
Q ss_pred CCcCHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 317 GIITRQEIYNRVKALLNDDG-IKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~~~~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
++.++|.+.+.++++|.+ +++..++.-+.+|. .+.+...++++.+
T Consensus 377 --l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~ 422 (426)
T PRK10017 377 --LLDGSLQAMVADTLGQLPALNARLAEAVSRERQ------TGMQMVQSVLERI 422 (426)
T ss_pred --CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHh
Confidence 889999999999998865 67666666666555 2445555666544
No 116
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.75 E-value=0.019 Score=43.49 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=44.2
Q ss_pred CccchhhhhcCCCCceEEEeecccccC---CH--HHHHHHHHHHhcCCCCEEEEEcCC
Q 017266 173 DSTCLSWLDKQAIGSVIYVAFGSAAVL---SQ--QQLEELALGLESLHQPFLWVVRPD 225 (374)
Q Consensus 173 ~~~~~~~l~~~~~~~vv~vs~GS~~~~---~~--~~~~~~~~~l~~~~~~viw~~~~~ 225 (374)
...+..|+...+.++.|+||+||.... .. ..+..++++++.++..+|..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 345679999999999999999998432 33 478899999999999999999865
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.44 E-value=0.13 Score=49.05 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=78.7
Q ss_pred ceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecC---hHHhh
Q 017266 187 SVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAP---QEKVL 258 (374)
Q Consensus 187 ~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p---q~~lL 258 (374)
+.|+|++=.. .....+.+.++++++.+.+.++++.+..... ......+.+.+.. .+++.+.+-++ ...++
T Consensus 202 ~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p--~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 202 PYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA--GSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC--CchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 4777877543 2334678999999998877666666543200 0000011111111 35677776544 44588
Q ss_pred CCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
.++++ +||-++.+- .||.+.|+|.|.+= +.+ ...+. |..+.+- . .+.++|.+++.+++ ++++
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~~-g~nvl~v-g----~~~~~I~~a~~~~~-~~~~ 341 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRLR-ADSVIDV-D----PDKEEIVKAIEKLL-DPAF 341 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc----hhhhh-cCeEEEe-C----CCHHHHHHHHHHHh-ChHH
Confidence 99999 999885544 99999999999762 211 11222 4433322 2 47899999999955 4443
No 118
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=95.30 E-value=4.6 Score=42.40 Aligned_cols=88 Identities=11% Similarity=0.166 Sum_probs=55.4
Q ss_pred CCCcEEEeec-Ch---HHhhCC-CC-CCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 243 SDRGKFVEWA-PQ---EKVLGH-PS-VACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 243 ~~~~~~~~~~-pq---~~lL~~-~~-~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
.+++.+.++. +. ..++.+ ++ .++||.-. | -.+++||+++|+|+|+--. -..+..|.+. ..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~----GG~~EiV~dg-~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRF----GGPLEIIQDG-VSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEEeC
Confidence 4667766653 32 234432 22 12377532 2 2589999999999997543 3455556653 6788887
Q ss_pred cCCCCCcCHHHHHHHHHHHh----cChHHHHH
Q 017266 313 PDENGIITRQEIYNRVKALL----NDDGIKAN 340 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l----~~~~~~~~ 340 (374)
.. +.++++++|.+++ .|++.+++
T Consensus 693 p~-----D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 693 PY-----HGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred CC-----CHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 63 6788888888775 57765444
No 119
>PHA01633 putative glycosyl transferase group 1
Probab=95.03 E-value=0.84 Score=42.92 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=55.2
Q ss_pred CCCcEEE---eecChH---HhhCCCCCCcEEecc---Cc-hhHHHHhhcCcccccccc------hhhh------hhhHHH
Q 017266 243 SDRGKFV---EWAPQE---KVLGHPSVACFLSHC---GW-NSSIEGLSMGVPFLCWPY------FVDQ------YQNRNY 300 (374)
Q Consensus 243 ~~~~~~~---~~~pq~---~lL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~~ 300 (374)
++++.+. +++++. .+++.+++ ||.-. |+ ++++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 5677777 444543 47888888 88642 43 578999999999998632 2332 333333
Q ss_pred HHh-HhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 301 ICD-AWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 301 v~~-~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
.++ .-|.|..++. .+.++++++|.+++..
T Consensus 278 ~~~~~~g~g~~~~~-----~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIHK-----FQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeecC-----CCHHHHHHHHHHHHhc
Confidence 332 1256666654 6899999999998543
No 120
>PRK14098 glycogen synthase; Provisional
Probab=94.83 E-value=0.45 Score=47.32 Aligned_cols=132 Identities=11% Similarity=0.032 Sum_probs=72.7
Q ss_pred eEEEeecccccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---HhhCCCCC
Q 017266 188 VIYVAFGSAAVL-SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE---KVLGHPSV 263 (374)
Q Consensus 188 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~ 263 (374)
.+++..|..... ..+.+.+.+..+.+.+.+++. +|.... .....+ ..+.++.++++.+...++.. .+++.+++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~-~~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi 384 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDK-EYEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM 384 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCH-HHHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCCE
Confidence 455566666322 233333333344334555544 443300 000011 12223346778888877764 48888998
Q ss_pred CcEEeccC---c-hhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 264 ACFLSHCG---W-NSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 264 ~~~I~HgG---~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
|+...= . .+.+||+++|+|.|+....+ |...+ ...+. +.|+.+.. -+.+++.++|.+++
T Consensus 385 --~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~-----~d~~~la~ai~~~l 449 (489)
T PRK14098 385 --LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHD-----YTPEALVAKLGEAL 449 (489)
T ss_pred --EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCC-----CCHHHHHHHHHHHH
Confidence 775432 1 47889999999888765422 22111 01122 67877765 36889999998865
No 121
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.73 E-value=0.29 Score=48.37 Aligned_cols=132 Identities=11% Similarity=0.040 Sum_probs=70.9
Q ss_pred eEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchh---hhhcCCCcEEEeecChH---HhhCC
Q 017266 188 VIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGF---VERVSDRGKFVEWAPQE---KVLGH 260 (374)
Q Consensus 188 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pq~---~lL~~ 260 (374)
.+++..|.... -..+.+.+.+..+.+.+.+++++ +... ....+.+ ..+..+++.+....++. .+++.
T Consensus 297 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 370 (476)
T cd03791 297 PLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGD-----PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAG 370 (476)
T ss_pred CEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCC-----HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHh
Confidence 45666677642 22333444444444445555444 3220 0011111 12224566655333433 37788
Q ss_pred CCCCcEEecc---Cc-hhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 261 PSVACFLSHC---GW-NSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 261 ~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
+++ ++.-. |. .+.+||+++|+|+|+....+ |.-.+...-.+. |.|+.+... +.+++.++|.++++
T Consensus 371 aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~~-----~~~~l~~~i~~~l~ 441 (476)
T cd03791 371 ADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEGY-----NADALLAALRRALA 441 (476)
T ss_pred CCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCCC-----CHHHHHHHHHHHHH
Confidence 888 76431 22 47899999999999765432 221111111122 588888763 68899999999875
No 122
>PHA01630 putative group 1 glycosyl transferase
Probab=94.09 E-value=2.6 Score=39.67 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=50.4
Q ss_pred ecChHH---hhCCCCCCcEEe--c-cC-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC--------
Q 017266 251 WAPQEK---VLGHPSVACFLS--H-CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE-------- 315 (374)
Q Consensus 251 ~~pq~~---lL~~~~~~~~I~--H-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-------- 315 (374)
++|+.+ +++.+++ |+. + -| -.+++||+++|+|+|+.-..+ ....+.+. ..|..++...
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~-~ng~lv~~~~~~~~~~~~ 269 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSN-LDVYWIKSGRKPKLWYTN 269 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCC-CceEEeeecccccccccC
Confidence 355444 6888888 653 3 22 468999999999999875432 11122221 1232222110
Q ss_pred ---CC---CcCHHHHHHHHHHHhcC---hHHHHHHHHHHHHH
Q 017266 316 ---NG---IITRQEIYNRVKALLND---DGIKANALKMKEMA 348 (374)
Q Consensus 316 ---~~---~~~~~~l~~~i~~~l~~---~~~~~~a~~l~~~~ 348 (374)
.| ..+.+++.+++.+++.| +.++++..+-+...
T Consensus 270 ~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~ 311 (331)
T PHA01630 270 PIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILY 311 (331)
T ss_pred CcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 00 02567777788888876 34555544444433
No 123
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=93.83 E-value=0.93 Score=44.83 Aligned_cols=135 Identities=8% Similarity=-0.002 Sum_probs=72.0
Q ss_pred eEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---HhhCCCCC
Q 017266 188 VIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE---KVLGHPSV 263 (374)
Q Consensus 188 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~ 263 (374)
.+++..|.... -..+.+.+.+..+.+.+.++++. |... + .....-..+..+.+.++.+....+.. .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-~-~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-P-ELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-H-HHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 45556677643 22333434444444445565544 4320 0 00000011122235566665444543 47888888
Q ss_pred CcEEecc---Cc-hhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 264 ACFLSHC---GW-NSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 264 ~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
++.-. |. .+.+||+++|+|.|+-...+ |.-.+...-... +.|+.+.. -+.+++.++|.+++.
T Consensus 369 --~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~-----~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 --ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEE-----YDPGALLAALSRALR 436 (473)
T ss_pred --EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCC-----CCHHHHHHHHHHHHH
Confidence 77432 33 47899999999999765422 222111000111 67888765 368899999999886
No 124
>PLN02275 transferase, transferring glycosyl groups
Probab=93.80 E-value=0.55 Score=44.82 Aligned_cols=75 Identities=21% Similarity=0.303 Sum_probs=52.1
Q ss_pred CCcEEE-eecChHH---hhCCCCCCcEEe----c--cC-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 244 DRGKFV-EWAPQEK---VLGHPSVACFLS----H--CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 244 ~~~~~~-~~~pq~~---lL~~~~~~~~I~----H--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
+|+.+. .|+|+.+ +|+.+++ ||. . -| -++++||+++|+|+|+... ..+.+.+.+. +.|+.+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccCC-CCeEEEC
Confidence 345555 4788765 5899999 763 1 12 2579999999999998643 2355666663 6898873
Q ss_pred cCCCCCcCHHHHHHHHHHHh
Q 017266 313 PDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l 332 (374)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 3678888888764
No 125
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.75 E-value=0.75 Score=34.02 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=42.7
Q ss_pred ccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHHHHhcChHHHH-HHHHHHH
Q 017266 269 HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVKALLNDDGIKA-NALKMKE 346 (374)
Q Consensus 269 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~-~a~~l~~ 346 (374)
+|-..-+.|++++|+|+|.-+. ......+.+ | -++.. -+.+++.++|.++++|++.++ -+++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-------~~~~el~~~i~~ll~~~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-------NDPEELAEKIEYLLENPEERRRIAKNARE 75 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-------CCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4445689999999999997754 222222222 3 22222 168999999999999987443 3333334
Q ss_pred HHH
Q 017266 347 MAR 349 (374)
Q Consensus 347 ~~~ 349 (374)
.++
T Consensus 76 ~v~ 78 (92)
T PF13524_consen 76 RVL 78 (92)
T ss_pred HHH
Confidence 443
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.45 E-value=0.83 Score=45.75 Aligned_cols=76 Identities=17% Similarity=0.289 Sum_probs=55.8
Q ss_pred CCcEEEeecC--hH-HhhCCCCCCcEEecc---CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 244 DRGKFVEWAP--QE-KVLGHPSVACFLSHC---GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 244 ~~~~~~~~~p--q~-~lL~~~~~~~~I~Hg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.++.+.++.. +. .++..+.+ +|.=+ |.++.+||+.+|+|+| .......|.. ..-|..+ .
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li---~-- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII---D-- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe---C--
Confidence 4666778777 33 37888887 87655 6779999999999999 2233444454 2566666 1
Q ss_pred CcCHHHHHHHHHHHhcChH
Q 017266 318 IITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~ 336 (374)
+..+|.++|..+|.+..
T Consensus 474 --d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 474 --DISELLKALDYYLDNLK 490 (519)
T ss_pred --CHHHHHHHHHHHHhCHH
Confidence 67889999999999986
No 127
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.43 E-value=1.1 Score=44.40 Aligned_cols=84 Identities=11% Similarity=0.060 Sum_probs=51.7
Q ss_pred cCCCcEE-EeecChH--HhhCCCCCCcEEec---cCc-hhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEee
Q 017266 242 VSDRGKF-VEWAPQE--KVLGHPSVACFLSH---CGW-NSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 242 ~~~~~~~-~~~~pq~--~lL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~ 312 (374)
.+.++.+ ..|-.+. .+++.+++ ||.- -|. .+.+||+++|+|.|+....+ |.-.+...-.+. +.|+.+.
T Consensus 335 ~~~~v~~~~g~~~~~~~~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~ 411 (466)
T PRK00654 335 YPGKVGVQIGYDEALAHRIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD 411 (466)
T ss_pred CCCcEEEEEeCCHHHHHHHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC
Confidence 3455444 3553222 47888998 7753 233 48899999999999864321 211111000122 6788886
Q ss_pred cCCCCCcCHHHHHHHHHHHhc
Q 017266 313 PDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~ 333 (374)
.. +.+++.++|.++++
T Consensus 412 ~~-----d~~~la~~i~~~l~ 427 (466)
T PRK00654 412 DF-----NAEDLLRALRRALE 427 (466)
T ss_pred CC-----CHHHHHHHHHHHHH
Confidence 53 68899999999875
No 128
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.42 E-value=1.6 Score=40.64 Aligned_cols=162 Identities=14% Similarity=0.068 Sum_probs=83.6
Q ss_pred CccEEEEcCCccCCcchhccCCCEE-eecccCCCCCCCCccCCCCCCCccchhhh---hcCCCCceEEEe-eccc--ccC
Q 017266 127 ISNWILCNSFYELDSPACDLVPNIL-TIGPLLGSDHSEHSAINFWPEDSTCLSWL---DKQAIGSVIYVA-FGSA--AVL 199 (374)
Q Consensus 127 ~~~~~l~ns~~~le~~~~~~~~~~~-~vGpl~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vv~vs-~GS~--~~~ 199 (374)
.-|+++++.+..+. --+|++ ..|+++.-.+ .. +...-..|. ...+. +.+.|- .|.. ..+
T Consensus 97 ~FDlvi~p~HD~~~-----~~~Nvl~t~ga~~~i~~-~~-------l~~a~~~~~~~~~~l~~-p~~avLIGG~s~~~~~ 162 (311)
T PF06258_consen 97 PFDLVIVPEHDRLP-----RGPNVLPTLGAPNRITP-ER-------LAEAAAAWAPRLAALPR-PRVAVLIGGDSKHYRW 162 (311)
T ss_pred ccCEEEECcccCcC-----CCCceEecccCCCcCCH-HH-------HHHHHHhhhhhhccCCC-CeEEEEECcCCCCccc
Confidence 56788888776542 235765 5788876311 10 111112232 22222 344444 4443 456
Q ss_pred CHHHHHHHHH----HHhcCCCCEEEEEcCCCCCccccCCCchhh----hhcC--CCcEEE---eecChHHhhCCCCCCcE
Q 017266 200 SQQQLEELAL----GLESLHQPFLWVVRPDFMNRSHAKLPDGFV----ERVS--DRGKFV---EWAPQEKVLGHPSVACF 266 (374)
Q Consensus 200 ~~~~~~~~~~----~l~~~~~~viw~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~---~~~pq~~lL~~~~~~~~ 266 (374)
+.+....++. .++..+..+....+.. -|..+. +... ..+.+. +.=|...+|+.++. .+
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~~~vttSRR--------Tp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~ 233 (311)
T PF06258_consen 163 DEEDAERLLDQLAALAAAYGGSLLVTTSRR--------TPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IV 233 (311)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEEcCCC--------CcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EE
Confidence 6664444433 3344554554444432 222221 1121 222122 22366778888887 35
Q ss_pred EeccCchhHHHHhhcCcccccccchhhhhh----hHHHHHhHhcceeEeec
Q 017266 267 LSHCGWNSSIEGLSMGVPFLCWPYFVDQYQ----NRNYICDAWKVGSQFFP 313 (374)
Q Consensus 267 I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~----na~~v~~~~g~G~~l~~ 313 (374)
||=--.+.+.||+..|+|+.++|... +.. -.+.+.+. |.-..+..
T Consensus 234 VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~-g~~r~~~~ 282 (311)
T PF06258_consen 234 VTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEER-GAVRPFTG 282 (311)
T ss_pred EcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHC-CCEEECCC
Confidence 55555688999999999999999875 221 12344553 66555543
No 129
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.49 E-value=0.4 Score=43.62 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=63.2
Q ss_pred CCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhh--hHHHHHhHhcceeEeecCCCCCcC
Q 017266 244 DRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQ--NRNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 244 ~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
+|..+. .|-...++|.++++ .|--+|. .+-.++-.|||+|.+|-.+-|+. .|++=.+-+|+.+.+-..+
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~----- 365 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE----- 365 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc-----
Confidence 343433 56566678877777 5555542 34457889999999999998876 5666666678888776543
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 321 RQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
+..-..+.++++.|+.+.+.++.-.
T Consensus 366 aq~a~~~~q~ll~dp~r~~air~nG 390 (412)
T COG4370 366 AQAAAQAVQELLGDPQRLTAIRHNG 390 (412)
T ss_pred hhhHHHHHHHHhcChHHHHHHHhcc
Confidence 2233344456999999888776433
No 130
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.42 E-value=3 Score=40.45 Aligned_cols=101 Identities=12% Similarity=0.039 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhcCCCCE-EEEEcCCCCCccccCCCchhhhhcCCCcEEEeec-Ch---HHhhCCCCCCcEEeccC----c
Q 017266 202 QQLEELALGLESLHQPF-LWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA-PQ---EKVLGHPSVACFLSHCG----W 272 (374)
Q Consensus 202 ~~~~~~~~~l~~~~~~v-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq---~~lL~~~~~~~~I~HgG----~ 272 (374)
.....+++++...+..+ ++.+|... ... ..++...++. ++ ..+++.+++ ||.-.= -
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~-----~~~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFS-----PFT--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCC-----ccc--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 34566788887765433 45566430 001 1233444554 22 346777887 776432 3
Q ss_pred hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHH
Q 017266 273 NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRV 328 (374)
Q Consensus 273 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 328 (374)
++++||+++|+|+|+....+ ..+ +.+. +.|+.+... +.++|++++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~~-----d~~~La~~~ 365 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSEE-----EVLQLAQLS 365 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECCC-----CHHHHHhcc
Confidence 68999999999999887654 222 3333 578888764 566777643
No 131
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.76 E-value=1 Score=42.59 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=67.6
Q ss_pred CCcEEE---eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcC
Q 017266 244 DRGKFV---EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 244 ~~~~~~---~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
.++++. +|.+...++.++-+ ++|-.|. -.-||-..|+|.+++=...+++. . .++ |.-+.+. .+
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~-v~a-gt~~lvg------~~ 327 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---G-VEA-GTNILVG------TD 327 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---c-eec-CceEEeC------cc
Confidence 346665 46777889999988 9999883 46789999999999988888887 2 232 4444432 46
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 017266 321 RQEIYNRVKALLNDDGIKANALKMKEMA 348 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~~~~~~a~~l~~~~ 348 (374)
.+.+.+++.+++++++..++.+...--.
T Consensus 328 ~~~i~~~~~~ll~~~~~~~~m~~~~npY 355 (383)
T COG0381 328 EENILDAATELLEDEEFYERMSNAKNPY 355 (383)
T ss_pred HHHHHHHHHHHhhChHHHHHHhcccCCC
Confidence 7999999999999988777655554443
No 132
>PLN02846 digalactosyldiacylglycerol synthase
Probab=91.32 E-value=3.3 Score=40.77 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=50.2
Q ss_pred EEeecChHHhhCCCCCCcEEecc----CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHH
Q 017266 248 FVEWAPQEKVLGHPSVACFLSHC----GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQE 323 (374)
Q Consensus 248 ~~~~~pq~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~ 323 (374)
+.++.+..+++...++ ||.-+ =-++++||+++|+|+|+.-..+ | ..+.+. +.|... -+.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~-------~~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTY-------DDGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEec-------CCHHH
Confidence 3455566678888888 88764 3478999999999999875332 2 333332 445444 15778
Q ss_pred HHHHHHHHhcCh
Q 017266 324 IYNRVKALLNDD 335 (374)
Q Consensus 324 l~~~i~~~l~~~ 335 (374)
+.+++.+++.++
T Consensus 353 ~a~ai~~~l~~~ 364 (462)
T PLN02846 353 FVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHccC
Confidence 999999998754
No 133
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=91.10 E-value=2.8 Score=41.04 Aligned_cols=92 Identities=16% Similarity=0.222 Sum_probs=63.1
Q ss_pred CCcEEE-eecC-hH-HhhCCCCCCcEEeccCc--hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 244 DRGKFV-EWAP-QE-KVLGHPSVACFLSHCGW--NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 244 ~~~~~~-~~~p-q~-~lL~~~~~~~~I~HgG~--~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
.|+.+. ++.+ .. +++..|++-+-|+|+.. +++.||+.+|+|++..=.... +...+.. |..+...
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~----g~l~~~~---- 396 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS----ENIFEHN---- 396 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC----CceecCC----
Confidence 555554 6677 44 49999999999999875 799999999999997643322 2222221 4454443
Q ss_pred cCHHHHHHHHHHHhcChH-HHHHHHHHHHH
Q 017266 319 ITRQEIYNRVKALLNDDG-IKANALKMKEM 347 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~~-~~~~a~~l~~~ 347 (374)
+.+++.++|.++|.+++ ++++..+-++.
T Consensus 397 -~~~~m~~~i~~lL~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 397 -EVDQLISKLKDLLNDPNQFRELLEQQREH 425 (438)
T ss_pred -CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 67899999999999986 55554444433
No 134
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=89.63 E-value=2.9 Score=41.20 Aligned_cols=101 Identities=16% Similarity=0.080 Sum_probs=65.2
Q ss_pred eecChHH---hhCCCCCCcEEe---ccCc-hhHHHHhhcCcc----cccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 250 EWAPQEK---VLGHPSVACFLS---HCGW-NSSIEGLSMGVP----FLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 250 ~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
..+++.+ +++.+++ |+. +=|. +++.|++++|+| +|+--..+ .+.. ++.|+.++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~~----l~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQE----LNGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChHH----hCCcEEECC-----
Confidence 4556654 6788888 775 4465 477899999999 55443322 2222 245777765
Q ss_pred cCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 319 ITRQEIYNRVKALLNDD--GIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
-+.++++++|.++++++ +.+++.+++.+.+.+ -+...-.+++++.+.
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 47889999999999754 366666666666544 245555666666653
No 135
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.35 E-value=3.3 Score=38.51 Aligned_cols=141 Identities=9% Similarity=0.067 Sum_probs=77.8
Q ss_pred hhhcCCCCceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee--cC
Q 017266 179 WLDKQAIGSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW--AP 253 (374)
Q Consensus 179 ~l~~~~~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p 253 (374)
++....+++.|.+..|+. ...+.+.+.++++.|.+.+.++++..+.+. +......+.+..+.. .+.+- ++
T Consensus 172 ~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----e~~~~~~i~~~~~~~-~l~g~~sL~ 246 (319)
T TIGR02193 172 FLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----EKQRAERIAEALPGA-VVLPKMSLA 246 (319)
T ss_pred hhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHhhCCCC-eecCCCCHH
Confidence 443333344666666653 457889999999999776788776655431 111111222222222 33332 33
Q ss_pred hH-HhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcce-eEeecCCCCCcCHHHHHHHHHHH
Q 017266 254 QE-KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVG-SQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 254 q~-~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+. .+++++++ +|+.- .|-+.=|.+.|+|.|++ ++ +.+..+..- +|-. ..+....-..++.+++.++++++
T Consensus 247 el~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 247 EVAALLAGADA--VVGVD-TGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred HHHHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhh
Confidence 44 48899998 99864 45666778899999876 22 111111111 1221 11112112338999999999876
Q ss_pred h
Q 017266 332 L 332 (374)
Q Consensus 332 l 332 (374)
|
T Consensus 319 ~ 319 (319)
T TIGR02193 319 L 319 (319)
T ss_pred C
Confidence 4
No 136
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.41 E-value=2.1 Score=36.59 Aligned_cols=48 Identities=21% Similarity=0.172 Sum_probs=35.5
Q ss_pred CCCcEEEeecCh-H--H-hhCCCCCCcEEeccC----chhHHHHhhcCcccccccchh
Q 017266 243 SDRGKFVEWAPQ-E--K-VLGHPSVACFLSHCG----WNSSIEGLSMGVPFLCWPYFV 292 (374)
Q Consensus 243 ~~~~~~~~~~pq-~--~-lL~~~~~~~~I~HgG----~~s~~eal~~GvP~l~~P~~~ 292 (374)
..|+.+.++++. . . ++..+++ +|+-.. .++++||+++|+|+|+-+..+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 467788887622 2 2 4444777 777775 689999999999999987644
No 137
>PLN02316 synthase/transferase
Probab=87.39 E-value=13 Score=40.34 Aligned_cols=114 Identities=8% Similarity=-0.026 Sum_probs=65.1
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchh--hhhhh-------HHHHHhHhc
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFV--DQYQN-------RNYICDAWK 306 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~--DQ~~n-------a~~v~~~~g 306 (374)
++++.+....+.. .+++.+++ |+.-. | -.+.+||+++|+|.|+-...+ |.... ++..... +
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-P 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-C
Confidence 4566665444543 58888888 88542 1 258999999999888754421 22211 1110111 4
Q ss_pred ceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 307 VGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 307 ~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
.|+.+.. -+.+.|..+|.+++.+. .+....++...++.+...-|-.....+++
T Consensus 976 tGflf~~-----~d~~aLa~AL~raL~~~--~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~ 1028 (1036)
T PLN02316 976 NGFSFDG-----ADAAGVDYALNRAISAW--YDGRDWFNSLCKRVMEQDWSWNRPALDYM 1028 (1036)
T ss_pred ceEEeCC-----CCHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 6888765 47889999999998642 33333445555554443333333333433
No 138
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=85.24 E-value=12 Score=39.62 Aligned_cols=99 Identities=16% Similarity=0.085 Sum_probs=60.0
Q ss_pred HhhCCCCCCcEEec---cCch-hHHHHhhcCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHHH
Q 017266 256 KVLGHPSVACFLSH---CGWN-SSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 256 ~lL~~~~~~~~I~H---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
.+++.+++ |+.- -|+| ...|++++|+|-=+++...+--..+.. +| .|+.++. .+.++++++|.+
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~----l~~~allVnP-----~D~~~lA~AI~~ 439 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS----LGAGALLVNP-----WNITEVSSAIKE 439 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh----hcCCeEEECC-----CCHHHHHHHHHH
Confidence 47788888 7754 4776 667999999992222222222222222 23 5788876 478899999999
Q ss_pred Hhc-ChH-HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 331 LLN-DDG-IKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 331 ~l~-~~~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+|+ +++ .+++.+++.+.++.. +...-...+++.+.
T Consensus 440 aL~m~~~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 440 ALNMSDEERETRHRHNFQYVKTH-----SAQKWADDFMSELN 476 (797)
T ss_pred HHhCCHHHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHHH
Confidence 998 443 555555555555442 33344445555543
No 139
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=84.13 E-value=4.3 Score=40.05 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=59.5
Q ss_pred EeecChHH---hhCCCCCCcEEe---ccCc-hhHHHHhhcCcc----cccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 249 VEWAPQEK---VLGHPSVACFLS---HCGW-NSSIEGLSMGVP----FLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 249 ~~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
.+++++.+ +++.+++ ||. +-|+ .+++||+++|+| +|+--..+ -+.. ...|+.++.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~~~----~~~g~lv~p---- 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AAEE----LSGALLVNP---- 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----chhh----cCCCEEECC----
Confidence 35667665 6888888 663 3455 467899999999 44332211 1111 134667665
Q ss_pred CcCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 318 IITRQEIYNRVKALLNDDG--IKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~--~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
-+.++++++|.++++++. .+++.++..+.+++ -+...-...+++++
T Consensus 412 -~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 412 -YDIDEVADAIHRALTMPLEERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred -CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 368899999999998653 33333333333332 24444455555543
No 140
>PRK14099 glycogen synthase; Provisional
Probab=83.73 E-value=19 Score=35.74 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=50.9
Q ss_pred CCCc-EEEeecChHH-hh-CCCCCCcEEec---cCc-hhHHHHhhcCcccccccchh--hhhhhHHHH---HhHhcceeE
Q 017266 243 SDRG-KFVEWAPQEK-VL-GHPSVACFLSH---CGW-NSSIEGLSMGVPFLCWPYFV--DQYQNRNYI---CDAWKVGSQ 310 (374)
Q Consensus 243 ~~~~-~~~~~~pq~~-lL-~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v---~~~~g~G~~ 310 (374)
++++ .+.+|-.+.. ++ +.+++ |+.- =|. .+.+||+++|+|.|+....+ |.-.+.... +.. +.|+.
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l 425 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQ 425 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEE
Confidence 4444 3456633333 34 45777 7752 333 47789999997766654321 322111100 111 46888
Q ss_pred eecCCCCCcCHHHHHHHHHH---HhcChHHHHH
Q 017266 311 FFPDENGIITRQEIYNRVKA---LLNDDGIKAN 340 (374)
Q Consensus 311 l~~~~~~~~~~~~l~~~i~~---~l~~~~~~~~ 340 (374)
+.. -+.+++.++|.+ +++|++.+++
T Consensus 426 ~~~-----~d~~~La~ai~~a~~l~~d~~~~~~ 453 (485)
T PRK14099 426 FSP-----VTADALAAALRKTAALFADPVAWRR 453 (485)
T ss_pred eCC-----CCHHHHHHHHHHHHHHhcCHHHHHH
Confidence 765 368899999987 6667654433
No 141
>PLN02939 transferase, transferring glycosyl groups
Probab=83.58 E-value=25 Score=37.79 Aligned_cols=91 Identities=9% Similarity=0.067 Sum_probs=57.1
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchh--hhhhh--HHHHHhHhcceeEe
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFV--DQYQN--RNYICDAWKVGSQF 311 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~v~~~~g~G~~l 311 (374)
.+++.+..+.+.. .+++.+++ ||.-. | -.+.+||+++|+|.|+....+ |...+ ...+.+.-+.|+.+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3567777777764 48888888 88642 2 257999999999998865533 22211 11111111567777
Q ss_pred ecCCCCCcCHHHHHHHHHHHhc----ChHHHHH
Q 017266 312 FPDENGIITRQEIYNRVKALLN----DDGIKAN 340 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~----~~~~~~~ 340 (374)
.. -+.+.+.++|.+++. |+..+++
T Consensus 914 ~~-----~D~eaLa~AL~rAL~~~~~dpe~~~~ 941 (977)
T PLN02939 914 LT-----PDEQGLNSALERAFNYYKRKPEVWKQ 941 (977)
T ss_pred cC-----CCHHHHHHHHHHHHHHhccCHHHHHH
Confidence 65 367888888888764 5554433
No 142
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=81.71 E-value=9.8 Score=34.21 Aligned_cols=143 Identities=18% Similarity=0.168 Sum_probs=77.8
Q ss_pred ccEEEEcCCccCCcchhccCCCEEe-ecccCCCC-CCCCccCCCCCCCccchhhhhcCCCCceEEEeeccc--ccCCHHH
Q 017266 128 SNWILCNSFYELDSPACDLVPNILT-IGPLLGSD-HSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSA--AVLSQQQ 203 (374)
Q Consensus 128 ~~~~l~ns~~~le~~~~~~~~~~~~-vGpl~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~--~~~~~~~ 203 (374)
-|++++.-+...+-. ..-.+|+++ +|-+|.-. .... ...+.....++..+. .|.++..|+. ....++.
T Consensus 110 fDlvivp~HD~~~~~-s~~~~Nilpi~Gs~h~Vt~~~lA------a~~e~~~~~~p~~rq-~vAVlVGg~nk~f~~~~d~ 181 (329)
T COG3660 110 FDLVIVPYHDWREEL-SDQGPNILPINGSPHNVTSQRLA------ALREAFKHLLPLPRQ-RVAVLVGGNNKAFVFQEDK 181 (329)
T ss_pred ceEEeccchhhhhhh-hccCCceeeccCCCCcccHHHhh------hhHHHHHhhCCCCCc-eEEEEecCCCCCCccCHHH
Confidence 467777766655421 123567776 45555421 0000 111112233322222 2566666766 3444544
Q ss_pred HHH----HHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcC-----CCcEE-----EeecChHHhhCCCCCCcEEec
Q 017266 204 LEE----LALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVS-----DRGKF-----VEWAPQEKVLGHPSVACFLSH 269 (374)
Q Consensus 204 ~~~----~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~pq~~lL~~~~~~~~I~H 269 (374)
... +.+.+++.+.+|+.++... -|+.....+. ..+.+ .++=|..+.|+.++. +|.-
T Consensus 182 a~q~~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady--ii~T 251 (329)
T COG3660 182 AHQFASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY--IIST 251 (329)
T ss_pred HHHHHHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce--EEEe
Confidence 433 5556777899999888754 1222211111 11122 234588899988887 6665
Q ss_pred cC-chhHHHHhhcCcccccc
Q 017266 270 CG-WNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 270 gG-~~s~~eal~~GvP~l~~ 288 (374)
.. .|...||...|+|+-++
T Consensus 252 aDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 252 ADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred cchhhhhHHHhccCCCeEEE
Confidence 55 58889999999998543
No 143
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=79.37 E-value=34 Score=32.23 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=60.6
Q ss_pred CCcEEE-eecChH---HhhCCCCCCcEEec--cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 244 DRGKFV-EWAPQE---KVLGHPSVACFLSH--CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 244 ~~~~~~-~~~pq~---~lL~~~~~~~~I~H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
+++.+. +++|-. .+|+.++++.|.+. =|.|++.-.++.|+|+.+- .+..--+.+.+. |+=+....++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~-~ipVlf~~d~-- 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQ-GIPVLFYGDE-- 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhC-CCeEEecccc--
Confidence 456554 788755 48999999888775 5789999999999999854 333333445553 7777766666
Q ss_pred CcCHHHHHHHHHHHhc
Q 017266 318 IITRQEIYNRVKALLN 333 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~ 333 (374)
++...+.++=+++..
T Consensus 318 -L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 -LDEALVREAQRQLAN 332 (360)
T ss_pred -CCHHHHHHHHHHHhh
Confidence 999999999887764
No 144
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=78.47 E-value=42 Score=31.10 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=56.7
Q ss_pred CCcEEE-eecChH---HhhCCCCCCcEEecc--CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC
Q 017266 244 DRGKFV-EWAPQE---KVLGHPSVACFLSHC--GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG 317 (374)
Q Consensus 244 ~~~~~~-~~~pq~---~lL~~~~~~~~I~Hg--G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 317 (374)
+++.+. +++|-. .+|+.++++.|+++= |.|++.-.++.|+|+++-- +-+.+.. +.+ .|+-+..+.+.
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e-~gv~Vlf~~d~-- 278 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTE-QGLPVLFTGDD-- 278 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHh-CCCeEEecCCc--
Confidence 566655 777754 599999998888864 7899999999999998652 2222222 334 37777666666
Q ss_pred CcCHHHHHHHHHHHh
Q 017266 318 IITRQEIYNRVKALL 332 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l 332 (374)
++...+.++=+++.
T Consensus 279 -L~~~~v~e~~rql~ 292 (322)
T PRK02797 279 -LDEDIVREAQRQLA 292 (322)
T ss_pred -ccHHHHHHHHHHHH
Confidence 88888877655443
No 145
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.63 E-value=34 Score=30.74 Aligned_cols=87 Identities=21% Similarity=0.366 Sum_probs=54.2
Q ss_pred CCcEEEeecC---hHHhhCCCCCCcEEec---cCch-hHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCC
Q 017266 244 DRGKFVEWAP---QEKVLGHPSVACFLSH---CGWN-SSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDEN 316 (374)
Q Consensus 244 ~~~~~~~~~p---q~~lL~~~~~~~~I~H---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 316 (374)
+++.+.++++ ...++..+++ ++.- .|.+ ++.|++++|+|+|.... ......+.+. +.|. +...
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~~~~-~~g~-~~~~-- 326 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVVEDG-ETGL-LVPP-- 326 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHhcCC-CceE-ecCC--
Confidence 5667778888 2236776776 6655 3553 46999999999976543 2222333331 2466 3332
Q ss_pred CCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 317 GIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
-..+++.+++..++++.+.++...
T Consensus 327 --~~~~~~~~~i~~~~~~~~~~~~~~ 350 (381)
T COG0438 327 --GDVEELADALEQLLEDPELREELG 350 (381)
T ss_pred --CCHHHHHHHHHHHhcCHHHHHHHH
Confidence 257899999999998874333333
No 146
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=76.48 E-value=6.5 Score=35.74 Aligned_cols=95 Identities=12% Similarity=0.162 Sum_probs=58.3
Q ss_pred CceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc-CCCcE-EEee--cCh-HHh
Q 017266 186 GSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV-SDRGK-FVEW--APQ-EKV 257 (374)
Q Consensus 186 ~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~pq-~~l 257 (374)
++.|.+..|+. ...+.+.+.++++.|.+.++++++..+++ ....-+.+.+.. ..++. +.+- +.+ ..+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~-----e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~l 195 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA-----ERELAEEIAAALGGPRVVNLAGKTSLRELAAL 195 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh-----hHHHHHHHHHhcCCCccccCcCCCCHHHHHHH
Confidence 34777777775 45778899999999987788887665433 111111122211 11211 2222 222 348
Q ss_pred hCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 258 LGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
++++++ +|+.-. +.+.=|.+.|+|++++
T Consensus 196 i~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 196 LARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 889998 999854 5566667899999876
No 147
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=73.32 E-value=5.6 Score=35.29 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=26.7
Q ss_pred CcccEE-EeCCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
.-||++ |+|+-.- -|..=|.++|||+|++.=+.+.
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 348876 6777654 7777899999999998766554
No 148
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=72.93 E-value=54 Score=32.64 Aligned_cols=105 Identities=13% Similarity=0.075 Sum_probs=66.6
Q ss_pred EEEeecChHH---hhCCCCCCcEEe---ccCchhHH-HHhhcCc----ccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 247 KFVEWAPQEK---VLGHPSVACFLS---HCGWNSSI-EGLSMGV----PFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 247 ~~~~~~pq~~---lL~~~~~~~~I~---HgG~~s~~-eal~~Gv----P~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+.+.+|+.+ +++.+++ ++. .-|+|-+. |.++++. |+|+=-+ --|. +. +.-++.+++
T Consensus 365 ~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSef-----aGaa--~~-l~~AllVNP-- 432 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEF-----AGAA--VE-LKGALLTNP-- 432 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecc-----ccch--hh-cCCCEEECC--
Confidence 3446778665 6677887 543 45888655 9999877 4433221 1121 22 455778876
Q ss_pred CCCcCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDG--IKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~--~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
.+.++++++|.+.|+.+. -+++.+++.+.++.. ....=.+.+++.+..
T Consensus 433 ---~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 433 ---YDPVRMDETIYVALAMPKAEQQARMREMFDAVNYY-----DVQRWADEFLAAVSP 482 (487)
T ss_pred ---CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHhhh
Confidence 578999999999998764 556666666665542 344445667776654
No 149
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=72.41 E-value=4.1 Score=38.75 Aligned_cols=99 Identities=12% Similarity=0.222 Sum_probs=58.2
Q ss_pred CCCcEEE-eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCC--Cc
Q 017266 243 SDRGKFV-EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENG--II 319 (374)
Q Consensus 243 ~~~~~~~-~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~--~~ 319 (374)
.+++... ...+-.++|..+++ .||--. +.+.|.+..++|+|......|.+.+. . |.-.-....-.| .-
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TTTSSSS-EES
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchHhhCCCceeC
Confidence 3555554 44567789999999 999874 57889999999999887655555321 1 322221111001 14
Q ss_pred CHHHHHHHHHHHhcChH-HHHHHHHHHHHHHH
Q 017266 320 TRQEIYNRVKALLNDDG-IKANALKMKEMARK 350 (374)
Q Consensus 320 ~~~~l~~~i~~~l~~~~-~~~~a~~l~~~~~~ 350 (374)
+.++|.++|.++++++. ++++-++..+.+-.
T Consensus 322 ~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~ 353 (369)
T PF04464_consen 322 NFEELIEAIENIIENPDEYKEKREKFRDKFFK 353 (369)
T ss_dssp SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHST
T ss_pred CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCC
Confidence 77899999999887665 55666666666544
No 150
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=70.19 E-value=14 Score=33.40 Aligned_cols=41 Identities=12% Similarity=0.149 Sum_probs=33.0
Q ss_pred cEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCccccccc
Q 017266 246 GKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWP 289 (374)
Q Consensus 246 ~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 289 (374)
+.+.+-++-.+++.+++. +||-.+ +.-+||+.+|+|++++-
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEec
Confidence 344466788889999998 888765 47789999999999864
No 151
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=69.93 E-value=3.4 Score=32.97 Aligned_cols=35 Identities=26% Similarity=0.098 Sum_probs=28.8
Q ss_pred CcccEEEeCCchhHHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVITDVTVGWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
...|+++.+.....+..+||++|||++.....+.+
T Consensus 99 ~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 99 VADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp TECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred ccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 45888888998889999999999999998776654
No 152
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=69.11 E-value=6.8 Score=33.07 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=22.3
Q ss_pred CCCCCCcEEeccCchhHHHHhhcCcccccccchh
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFV 292 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 292 (374)
.+.....+|++||...++.... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4455556999999988888877 99999999843
No 153
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=68.09 E-value=1.1e+02 Score=29.04 Aligned_cols=129 Identities=12% Similarity=0.197 Sum_probs=74.4
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhc---------CCC-CEE-EEEcCCCCCccccCCCchhhhhc----CCCcEE
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLES---------LHQ-PFL-WVVRPDFMNRSHAKLPDGFVERV----SDRGKF 248 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~---------~~~-~vi-w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 248 (374)
++++.++||.-| -.+.+.+..+++|+.. .+. .++ ..+|++ .+.+.+.+.+ -.++.+
T Consensus 252 ~~~pallvsSTs--wTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG-------PlkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 252 PERPALLVSSTS--WTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG-------PLKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred cCCCeEEEecCC--CCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC-------chhHHHHHHHHHhcccceee
Confidence 345567776433 3455667777777752 111 233 334433 2223332222 244555
Q ss_pred E-eecC---hHHhhCCCCCCcEEeccCch-----hHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCc
Q 017266 249 V-EWAP---QEKVLGHPSVACFLSHCGWN-----SSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGII 319 (374)
Q Consensus 249 ~-~~~p---q~~lL~~~~~~~~I~HgG~~-----s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 319 (374)
. .|.. ...+|+.+++|..+|-.-.| -+..-.-+|+|++.+-+-- -..+++.-.-|+.. -
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc-----l~ELVkh~eNGlvF-------~ 390 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC-----LDELVKHGENGLVF-------E 390 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh-----HHHHHhcCCCceEe-------c
Confidence 4 8864 44599999999888866544 4667777888887764421 22233331346555 3
Q ss_pred CHHHHHHHHHHHhc
Q 017266 320 TRQEIYNRVKALLN 333 (374)
Q Consensus 320 ~~~~l~~~i~~~l~ 333 (374)
+.+++++.+..+++
T Consensus 391 Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 391 DSEELAEQLQMLFK 404 (444)
T ss_pred cHHHHHHHHHHHHh
Confidence 67889998888886
No 154
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=68.08 E-value=21 Score=36.11 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=46.7
Q ss_pred hHHhhCCCCCCcEEe---ccCc-hhHHHHhhcCcccccccchh-hhhhhHHHHHhHhcceeEeecCCCCC--cCHHHHHH
Q 017266 254 QEKVLGHPSVACFLS---HCGW-NSSIEGLSMGVPFLCWPYFV-DQYQNRNYICDAWKVGSQFFPDENGI--ITRQEIYN 326 (374)
Q Consensus 254 q~~lL~~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~g~G~~l~~~~~~~--~~~~~l~~ 326 (374)
..+++..+++ ||. +=|+ .+++||+++|+|+|.-...+ ....+ ..+...-..|+.+...++.. -+.++|.+
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 4557777888 555 3454 58999999999999876532 22221 11111001567775322111 24567888
Q ss_pred HHHHHhcCh
Q 017266 327 RVKALLNDD 335 (374)
Q Consensus 327 ~i~~~l~~~ 335 (374)
++.++++.+
T Consensus 545 ~m~~~~~~~ 553 (590)
T cd03793 545 YMYEFCQLS 553 (590)
T ss_pred HHHHHhCCc
Confidence 888888543
No 155
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=66.54 E-value=22 Score=37.34 Aligned_cols=108 Identities=15% Similarity=0.067 Sum_probs=63.2
Q ss_pred EEeecChHH---hhCCCCCCcEEec---cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcC
Q 017266 248 FVEWAPQEK---VLGHPSVACFLSH---CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 248 ~~~~~pq~~---lL~~~~~~~~I~H---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
+.+++++.+ +++.+++ |+.- -|+ ..+.|++++|+|-.+.|...+--.-+. + +.-|+.++. -+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~-l~~~llv~P-----~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---E-LAEALLVNP-----ND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH---H-hCcCeEECC-----CC
Confidence 336677665 7788888 6653 355 477899999776434443332211122 2 233777766 46
Q ss_pred HHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 321 RQEIYNRVKALLNDD--GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
.++++++|.++++++ +.+++.+++.+.++. -+...-.+.+++.+.+
T Consensus 415 ~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 415 IEGIAAAIKRALEMPEEEQRERMQAMQERLRR-----YDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHH
Confidence 889999999999854 344444444444432 2444445555555443
No 156
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=65.99 E-value=18 Score=33.89 Aligned_cols=95 Identities=12% Similarity=0.102 Sum_probs=59.0
Q ss_pred CceEEEeec-cc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee--cChH-Hhh
Q 017266 186 GSVIYVAFG-SA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW--APQE-KVL 258 (374)
Q Consensus 186 ~~vv~vs~G-S~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pq~-~lL 258 (374)
++.|.+..| |. ...+.+.+.++++.+.+.+.+|++..++. ..+.-+.+.........+.+- +.+. .++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~-----e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD-----EEERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH-----HHHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 458888888 44 45788999999999998886655544432 111112222222322224433 3333 377
Q ss_pred CCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++++ ||+-- .|-+.=|.+.|+|.|++
T Consensus 250 ~~a~l--~I~~D-Sg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGND-SGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEccC-ChHHHHHHHcCCCEEEE
Confidence 88888 88753 35566678889999886
No 157
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.39 E-value=56 Score=29.90 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=50.3
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCcc---ccCCCch----hhhhcCCCcEEEeecChHH---hhCCCCCCcEE
Q 017266 198 VLSQQQLEELALGLESLHQPFLWVVRPDFMNRS---HAKLPDG----FVERVSDRGKFVEWAPQEK---VLGHPSVACFL 267 (374)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~pq~~---lL~~~~~~~~I 267 (374)
......+...++.+++.+.+++..+......+. ....+.+ +-.+.+-++...+|+||.+ +|..|++ -+
T Consensus 185 aY~npa~~s~ieq~r~a~~p~llL~~e~~~~~~~~~~~~~~~~a~Gdv~~~~~lrvvklPFvpqddyd~LL~lcD~--n~ 262 (370)
T COG4394 185 AYENPALPSWIEQLRKADKPILLLIPEGKTQANFAKYFDNNNNADGDVFQTAKLRVVKLPFVPQDDYDELLWLCDF--NL 262 (370)
T ss_pred ccCCcchHHHHHHHHhcCCCEEEEcccchHHHHHHHHcCCCcccccchhcccceEEEEecCCcHhHHHHHHHhccc--ce
Confidence 334455666777777777777766654311000 0000000 0000122334559999986 8888887 44
Q ss_pred eccCchhHHHHhhcCccccc
Q 017266 268 SHCGWNSSIEGLSMGVPFLC 287 (374)
Q Consensus 268 ~HgG~~s~~eal~~GvP~l~ 287 (374)
-+ |--|...|..+|+|.+=
T Consensus 263 VR-GEDSFVRAq~agkPflW 281 (370)
T COG4394 263 VR-GEDSFVRAQLAGKPFLW 281 (370)
T ss_pred ee-cchHHHHHHHcCCCcEE
Confidence 44 56799999999999973
No 158
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=62.82 E-value=14 Score=32.78 Aligned_cols=98 Identities=9% Similarity=0.107 Sum_probs=52.2
Q ss_pred CCceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcE-EEee--cCh-HHh
Q 017266 185 IGSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGK-FVEW--APQ-EKV 257 (374)
Q Consensus 185 ~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~pq-~~l 257 (374)
+++.|.+..|+. ...+.+.+.++++.|.+.+++++...+.... ....-+.+.+....++. +.+- +.+ ..+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ---EKEIADQIAAGLQNPVINLAGKTSLRELAAL 180 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH---HHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH---HHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence 344777777775 4568899999999998887676655443300 00000111111122222 2222 233 348
Q ss_pred hCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 258 LGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
++++++ +|+.-. |.+.=|.+.|+|+|++
T Consensus 181 i~~a~~--~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADL--VIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSE--EEEESS-HHHHHHHHTT--EEEE
T ss_pred HhcCCE--EEecCC-hHHHHHHHHhCCEEEE
Confidence 889998 998754 6677788999999988
No 159
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=62.43 E-value=4.3 Score=39.98 Aligned_cols=62 Identities=18% Similarity=0.189 Sum_probs=42.4
Q ss_pred hHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHH
Q 017266 274 SSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALK 343 (374)
Q Consensus 274 s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 343 (374)
++.||+++|+|+++. ++-.-++.|+. .-.|..++.++ -....+++++.++..|++++.++.+
T Consensus 381 v~IEAMa~glPvvAt----~~GGP~EiV~~-~~tG~l~dp~~---e~~~~~a~~~~kl~~~p~l~~~~~~ 442 (495)
T KOG0853|consen 381 VPIEAMACGLPVVAT----NNGGPAEIVVH-GVTGLLIDPGQ---EAVAELADALLKLRRDPELWARMGK 442 (495)
T ss_pred eeHHHHhcCCCEEEe----cCCCceEEEEc-CCcceeeCCch---HHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 789999999999975 22333333443 24576666532 3344799999999999997666543
No 160
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=61.37 E-value=29 Score=32.59 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=60.4
Q ss_pred CCceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCC-CcE-EEee--cChH-H
Q 017266 185 IGSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSD-RGK-FVEW--APQE-K 256 (374)
Q Consensus 185 ~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--~pq~-~ 256 (374)
+++.|.+..|+. ...+.+.+.++++.|.+.+.++++.-++... +...-+.+.+..+. ++. +.+- +.+. .
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 345777777875 3467899999999997778887766443200 00011112111111 111 2232 3344 4
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++++++ ||+. -.|-+.=|.+.|+|.|.+
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8899998 9998 557788889999999976
No 161
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=61.35 E-value=78 Score=25.99 Aligned_cols=140 Identities=16% Similarity=0.216 Sum_probs=67.6
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEE
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFL 267 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I 267 (374)
.|.|-+||.. +....+++...|++.+..+-..+-.. ...|+.+. +++ .-+.+...+.||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~----------~~~---~~~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLL----------EFV---KEYEARGADVII 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHH----------HHH---HHTTTTTESEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHH----------HHH---HHhccCCCEEEE
Confidence 4666677754 46778888888888776543333211 22333321 111 112222233499
Q ss_pred eccCchhHHHHhhc---CcccccccchhhhhhhHH---HHHhH-hcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 268 SHCGWNSSIEGLSM---GVPFLCWPYFVDQYQNRN---YICDA-WKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 268 ~HgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~---~v~~~-~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+=+|...-+-.+.+ -.|+|.+|....+..... .+.+. -|+++..-.-+ +..++.-+.-.|-. +.|++++++
T Consensus 61 a~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~-~~~nAA~~A~~ILa-~~d~~l~~k 138 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN-NGFNAALLAARILA-LKDPELREK 138 (150)
T ss_dssp EEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST-HHHHHHHHHHHHHH-TT-HHHHHH
T ss_pred EECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc-CchHHHHHHHHHHh-cCCHHHHHH
Confidence 88886544333332 679999998766543222 12221 14444332211 01233333333322 357888888
Q ss_pred HHHHHHHHHH
Q 017266 341 ALKMKEMARK 350 (374)
Q Consensus 341 a~~l~~~~~~ 350 (374)
.+...+..++
T Consensus 139 l~~~~~~~~~ 148 (150)
T PF00731_consen 139 LRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 8888887765
No 162
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=59.77 E-value=27 Score=32.47 Aligned_cols=134 Identities=9% Similarity=-0.010 Sum_probs=72.2
Q ss_pred ceEE-Eeeccc--ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee--cChH-HhhCC
Q 017266 187 SVIY-VAFGSA--AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW--APQE-KVLGH 260 (374)
Q Consensus 187 ~vv~-vs~GS~--~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pq~-~lL~~ 260 (374)
+.|. +-.||. ...+.+.+.++++.+.+.+.++++..+... +...-+.+.+. ..++.+.+- +.+. .++++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----e~~~~~~i~~~-~~~~~l~g~~sL~elaali~~ 253 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----EEQRAKRLAEG-FPYVEVLPKLSLEQVARVLAG 253 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHcc-CCcceecCCCCHHHHHHHHHh
Confidence 3554 444444 357889999999999777788765545331 11111112111 112233332 3344 48899
Q ss_pred CCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcc-eeEee--cCCCCCcCHHHHHHHHHHHhc
Q 017266 261 PSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKV-GSQFF--PDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~-G~~l~--~~~~~~~~~~~l~~~i~~~l~ 333 (374)
+++ ||+--. |.+.=|.+.|+|+|++=-..+.... .- +|- ...+. ...-..++.+++.++++++|+
T Consensus 254 a~l--~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~----~p-~~~~~~~~~~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 254 AKA--VVSVDT-GLSHLTAALDRPNITLYGPTDPGLI----GG-YGKNQHACRSPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred CCE--EEecCC-cHHHHHHHhCCCEEEEECCCCcccc----cC-CCCCceeecCCCcccccCCHHHHHHHHHHHhh
Confidence 999 999654 5677788999999886111111111 00 010 01111 111112889999988888763
No 163
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=59.23 E-value=16 Score=33.07 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=35.2
Q ss_pred CCCCCcEEeccCchhHHHHhh------cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 260 HPSVACFLSHCGWNSSIEGLS------MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~------~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
.+++ +|+-||-||++.++. .++|++++... .+|..- + +..+++.+++.++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL~---~---~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFYT---D---WRPFEVDKLVIALAK 92 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceecc---c---CCHHHHHHHHHHHHc
Confidence 3455 999999999999976 47888877420 122221 2 456667777777765
Q ss_pred C
Q 017266 334 D 334 (374)
Q Consensus 334 ~ 334 (374)
+
T Consensus 93 g 93 (265)
T PRK04885 93 D 93 (265)
T ss_pred C
Confidence 4
No 164
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.35 E-value=31 Score=32.14 Aligned_cols=96 Identities=7% Similarity=0.050 Sum_probs=58.4
Q ss_pred CCceEEEeeccc----ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcE-EEee--cChH-H
Q 017266 185 IGSVIYVAFGSA----AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGK-FVEW--APQE-K 256 (374)
Q Consensus 185 ~~~vv~vs~GS~----~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~pq~-~ 256 (374)
+++.|.+..|+. ...+.+.+.++++.+.+.+.+++..-++. +.+.-+.+.+..+.++. +.+- +.+. .
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~-----e~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK-----DHPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh-----hHHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 345788887763 34688999999999877677776553322 11111122222222222 2222 3333 4
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++++++ +|+.-. |-+.=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~DS-Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTNDS-GLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 8889998 998643 5667788999999865
No 165
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=57.86 E-value=27 Score=29.33 Aligned_cols=44 Identities=9% Similarity=0.052 Sum_probs=36.7
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHh-CCCeEEEec
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQM-GIARAAVVT 53 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~l-giP~v~~~~ 53 (374)
.+.+.+.+|++++ -.||+||...-...++-+-+.+ ++|.+.|+=
T Consensus 52 av~~a~~~L~~~G--f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 52 AVARAARQLRAQG--FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHHHHHcC--CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 3456677788887 7789999999888999999999 999999853
No 166
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=54.11 E-value=37 Score=31.96 Aligned_cols=96 Identities=8% Similarity=0.028 Sum_probs=58.1
Q ss_pred CCceEEEeeccc----ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCC----Cc-EEEee--cC
Q 017266 185 IGSVIYVAFGSA----AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSD----RG-KFVEW--AP 253 (374)
Q Consensus 185 ~~~vv~vs~GS~----~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~--~p 253 (374)
+++.|.+..|+. ...+.+.+.++++.|.+.+.+++..-++. +...-+.+.+..+. ++ -+.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~-----e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK-----DHEAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH-----hHHHHHHHHHhcccccccceeeccCCCCHH
Confidence 445788888773 34678999999999876677776553322 11111111111111 11 12232 23
Q ss_pred hH-HhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 254 QE-KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 254 q~-~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+. .+++++++ ||+-- .|-+.=|.+.|+|+|.+
T Consensus 254 el~ali~~a~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 33 38899998 99854 46677788999999865
No 167
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=53.90 E-value=16 Score=30.72 Aligned_cols=45 Identities=11% Similarity=0.217 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchh
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
...++..++++++++ +|+||-+.. ...+|+++|+|.+.+.++..+
T Consensus 111 ~~e~~~~i~~~~~~G----~~viVGg~~---~~~~A~~~gl~~v~i~sg~es 155 (176)
T PF06506_consen 111 EEEIEAAIKQAKAEG----VDVIVGGGV---VCRLARKLGLPGVLIESGEES 155 (176)
T ss_dssp HHHHHHHHHHHHHTT------EEEESHH---HHHHHHHTTSEEEESS--HHH
T ss_pred HHHHHHHHHHHHHcC----CcEEECCHH---HHHHHHHcCCcEEEEEecHHH
Confidence 456788899998888 999999984 468899999999887665433
No 168
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=53.68 E-value=26 Score=32.31 Aligned_cols=55 Identities=13% Similarity=0.195 Sum_probs=36.5
Q ss_pred CCCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
..+++ +|+-||-||+++++.. ++|++++-. - .+|... + ++.+++.++|.+++++
T Consensus 62 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~------------G--~lGFL~---~---~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 62 ARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH------------G--RLGFIT---D---IPLDDMQETLPPMLAG 119 (291)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC------------C--Cccccc---c---CCHHHHHHHHHHHHcC
Confidence 34666 9999999999999763 677776642 0 123222 2 5667777777777754
Q ss_pred h
Q 017266 335 D 335 (374)
Q Consensus 335 ~ 335 (374)
+
T Consensus 120 ~ 120 (291)
T PRK02155 120 N 120 (291)
T ss_pred C
Confidence 3
No 169
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.97 E-value=24 Score=32.41 Aligned_cols=57 Identities=16% Similarity=0.068 Sum_probs=37.0
Q ss_pred hhCCCCCCcEEeccCchhHHHHhh----cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLS----MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
+...+++ +|+-||-||++.+.. .++|++++-.. .+|. -.+ ++.+++.+++.+++
T Consensus 61 ~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGF---Lt~---~~~~~~~~~l~~i~ 118 (287)
T PRK14077 61 LFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGF---LTD---ITVDEAEKFFQAFF 118 (287)
T ss_pred cccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------Cccc---CCc---CCHHHHHHHHHHHH
Confidence 3345666 999999999997765 36787766320 1222 122 56777888888877
Q ss_pred cCh
Q 017266 333 NDD 335 (374)
Q Consensus 333 ~~~ 335 (374)
+++
T Consensus 119 ~g~ 121 (287)
T PRK14077 119 QGE 121 (287)
T ss_pred cCC
Confidence 543
No 170
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=52.65 E-value=19 Score=33.73 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=26.0
Q ss_pred CcccEEE-eCCch-hHHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVI-TDVTV-GWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI-~D~~~-~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
+.||+|| .|+.. ..+..=|.++|||+|++.=+.+.
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~d 187 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCD 187 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCCC
Confidence 3588875 56654 37888899999999998755543
No 171
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=52.34 E-value=31 Score=28.61 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=28.0
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEc
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVR 223 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~ 223 (374)
.+|+++||....+...++..+.+|.+.+.--++..+
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 699999999887788899999999887653344443
No 172
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=50.83 E-value=19 Score=30.86 Aligned_cols=34 Identities=26% Similarity=0.205 Sum_probs=25.6
Q ss_pred CcccEEEe-CCch-hHHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCVIT-DVTV-GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI~-D~~~-~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..||+||+ |+.. ..+..=|.++|||+|++.-+.+
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~ 161 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC 161 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 56888854 5543 3777789999999999876654
No 173
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=50.72 E-value=15 Score=31.97 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=24.7
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh---H----HHHHHHHhCCCeEEEe
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG---W----ALEIAEQMGIARAAVV 52 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~---~----~~~~A~~lgiP~v~~~ 52 (374)
+.+.++++. ..||+|++|..-. = |..+...+++|+|...
T Consensus 83 l~~~~~~l~-----~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVA 128 (208)
T cd06559 83 LLEALEKLK-----TKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVA 128 (208)
T ss_pred HHHHHHhCC-----CCCCEEEEeCCccccCCCcchhheeeeecCCCEEEEE
Confidence 445555554 4599999999743 2 3334455667888754
No 174
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=50.71 E-value=21 Score=31.06 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=26.3
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCch-------hHHHHHHHHhCCCeEEEe
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTV-------GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~-------~~~~~~A~~lgiP~v~~~ 52 (374)
|.+-++++++. .++|+|++|..- ..|..++-.+++|+|...
T Consensus 77 P~~l~~l~~l~-----~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVA 124 (206)
T PF04493_consen 77 PCILEALEKLK-----NKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVA 124 (206)
T ss_dssp HHHHHHHHTSS-----S--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEE
T ss_pred HHHHHHHHHhc-----ccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEe
Confidence 45566666665 458999999872 345567788899999964
No 175
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=50.48 E-value=60 Score=30.56 Aligned_cols=97 Identities=8% Similarity=0.158 Sum_probs=59.3
Q ss_pred CceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcC-CC-cEEEee--cChH-Hh
Q 017266 186 GSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVS-DR-GKFVEW--APQE-KV 257 (374)
Q Consensus 186 ~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~pq~-~l 257 (374)
++.|.+..|+. ...+.+.+.++++.|.+.+.++++..++... ....-..+.+... .+ +-+.+- +.+. .+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence 45777888876 4568899999999998778887766554310 0000011111111 11 122332 3333 48
Q ss_pred hCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 258 LGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
++++++ ||+.-. |-+.=|.+.|+|.|++
T Consensus 260 i~~a~l--~v~nDS-Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 260 IDHAQL--FIGVDS-APAHIAAAVNTPLICL 287 (352)
T ss_pred HHhCCE--EEecCC-HHHHHHHHcCCCEEEE
Confidence 899999 999754 5666678899999875
No 176
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=49.21 E-value=80 Score=29.14 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=37.3
Q ss_pred CCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 260 HPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
.+++ +|+=||-||+++++.. ++|++++... .+|.. .+ ++.+++.++|.++++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl---~~---~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL---TD---IRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc---cc---CCHHHHHHHHHHHHcCC
Confidence 4566 9999999999998753 6687776531 12222 22 56788888888888643
No 177
>PLN02470 acetolactate synthase
Probab=49.04 E-value=76 Score=32.39 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=51.3
Q ss_pred eecccccC--CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec-ChHH-------hhCCC
Q 017266 192 AFGSAAVL--SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA-PQEK-------VLGHP 261 (374)
Q Consensus 192 s~GS~~~~--~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pq~~-------lL~~~ 261 (374)
+|||.... .....+.+++.|++.|.+.++-+.... ...+-+.+.+ ..++.++.-- .+.. -..+.
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~----~~~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~tg 75 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGA----SMEIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKASG 75 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcc----cHHHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHhC
Confidence 46666322 223356788888888888888776551 1111111100 1123332110 1111 11233
Q ss_pred CCCcEEeccCc------hhHHHHhhcCccccccc
Q 017266 262 SVACFLSHCGW------NSSIEGLSMGVPFLCWP 289 (374)
Q Consensus 262 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 289 (374)
+++++++|.|- +.+.+|.+.++|||++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 56679999885 47889999999999985
No 178
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=46.88 E-value=2.7e+02 Score=26.69 Aligned_cols=88 Identities=18% Similarity=0.143 Sum_probs=56.6
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCcccc-CCC-----chhhhhcCCC--cEEEeecChHH---hhCCCCCCc
Q 017266 197 AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHA-KLP-----DGFVERVSDR--GKFVEWAPQEK---VLGHPSVAC 265 (374)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~-~~~-----~~~~~~~~~~--~~~~~~~pq~~---lL~~~~~~~ 265 (374)
...+...+..+++++++.+.++...+..+....... -+. .+- ....++ +.+.+|+||.+ +|-.|++
T Consensus 190 F~Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~-- 266 (374)
T PF10093_consen 190 FCYENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF-- 266 (374)
T ss_pred EeCCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--
Confidence 445666789999999998888877766552111110 000 000 001233 34559999986 8988888
Q ss_pred EEeccCchhHHHHhhcCcccccc
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
=+-+ |-=|..-|..+|+|+|=-
T Consensus 267 NfVR-GEDSfVRAqwAgkPFvWh 288 (374)
T PF10093_consen 267 NFVR-GEDSFVRAQWAGKPFVWH 288 (374)
T ss_pred ceEe-cchHHHHHHHhCCCceEe
Confidence 4545 557999999999999843
No 179
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.57 E-value=33 Score=31.84 Aligned_cols=55 Identities=13% Similarity=0.191 Sum_probs=37.2
Q ss_pred CCCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
..+++ +|+=||=||++.+... ++|++++-. - .+|.. .+ ++.+++.+++.+++++
T Consensus 67 ~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~------------G--~lGFL---t~---~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINT------------G--HLGFL---TE---AYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeC------------C--CCccc---cc---CCHHHHHHHHHHHHcC
Confidence 34566 9999999999998764 778887732 0 12222 22 5667788888888765
Q ss_pred h
Q 017266 335 D 335 (374)
Q Consensus 335 ~ 335 (374)
+
T Consensus 125 ~ 125 (305)
T PRK02649 125 Q 125 (305)
T ss_pred C
Confidence 4
No 180
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.05 E-value=36 Score=31.35 Aligned_cols=57 Identities=21% Similarity=0.327 Sum_probs=38.3
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
+...+++ +|+=||=||++.+... ++|++++-.. .+|.. .+ ++.+++.+++.+++
T Consensus 61 ~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL---t~---~~~~~~~~~l~~i~ 118 (292)
T PRK01911 61 LDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL---AT---VSKEEIEETIDELL 118 (292)
T ss_pred cccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc---cc---cCHHHHHHHHHHHH
Confidence 3345666 9999999999998773 6788776320 12222 22 56778888888887
Q ss_pred cCh
Q 017266 333 NDD 335 (374)
Q Consensus 333 ~~~ 335 (374)
++.
T Consensus 119 ~g~ 121 (292)
T PRK01911 119 NGD 121 (292)
T ss_pred cCC
Confidence 654
No 181
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=45.88 E-value=24 Score=29.37 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=19.9
Q ss_pred CcccEEEeCCchhHHHHH-----HHHh-CCCeEEEecc
Q 017266 23 EQISCVITDVTVGWALEI-----AEQM-GIARAAVVTF 54 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~-----A~~l-giP~v~~~~~ 54 (374)
.+||+||+-..++....+ ...+ ++|++++.|-
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD 125 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTD 125 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcC
Confidence 349999999987533312 2224 5787776554
No 182
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=45.34 E-value=35 Score=30.80 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=23.8
Q ss_pred ccEEEeCCc-----hh-HHHHHHHHhCCCeEEEecc
Q 017266 25 ISCVITDVT-----VG-WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 25 ~D~iI~D~~-----~~-~~~~~A~~lgiP~v~~~~~ 54 (374)
||+|++--- .. -+..+|+.||+|++++.+.
T Consensus 113 ~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 113 FDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 999998543 22 6778999999999998654
No 183
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=45.11 E-value=37 Score=31.08 Aligned_cols=76 Identities=12% Similarity=0.272 Sum_probs=55.4
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHH
Q 017266 197 AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSI 276 (374)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ 276 (374)
+..+.+..+++.+++.....+.||...... +-.++.++++...+-++|+. ||-..-..+++
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~-----------------ga~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGY-----------------GANRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcC-----------------CHHHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 345667889999999999999999988661 11245566666666677777 88888888888
Q ss_pred HHhhc--Ccccccccch
Q 017266 277 EGLSM--GVPFLCWPYF 291 (374)
Q Consensus 277 eal~~--GvP~l~~P~~ 291 (374)
-+++. |++.+.-|+.
T Consensus 105 ~~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 105 LALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHHhcCceEEECccc
Confidence 77754 7777777754
No 184
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=44.16 E-value=57 Score=26.79 Aligned_cols=44 Identities=9% Similarity=0.120 Sum_probs=31.2
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCc--------h-hHHHHHHHHhCCCeEEEeccch
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVT--------V-GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~--------~-~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
.+.+.+++++ ..+|+||+|.. . ....+++..++.|.+.+.....
T Consensus 88 ~i~~~~~~l~-----~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~ 140 (166)
T TIGR00347 88 ELSKHLRTLE-----QKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKL 140 (166)
T ss_pred HHHHHHHHHH-----hcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCC
Confidence 4555565654 34999998884 1 2566799999999988775544
No 185
>PRK12342 hypothetical protein; Provisional
Probab=43.88 E-value=34 Score=30.78 Aligned_cols=30 Identities=13% Similarity=0.146 Sum_probs=24.0
Q ss_pred ccEEEeCCchh------HHHHHHHHhCCCeEEEecc
Q 017266 25 ISCVITDVTVG------WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 25 ~D~iI~D~~~~------~~~~~A~~lgiP~v~~~~~ 54 (374)
||+|++---.. -+..+|+.||+|++++...
T Consensus 110 ~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 110 FDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred CCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 99999855432 4788999999999997654
No 186
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=43.85 E-value=76 Score=30.04 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=51.1
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCc-hhhh-hcCCCcE-----E----------Ee
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPD-GFVE-RVSDRGK-----F----------VE 250 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~-~~~~-~~~~~~~-----~----------~~ 250 (374)
+++.+.||....-+. ..+++.|++.+++++|+....... ..-+|+ ++.- .++.... + ..
T Consensus 4 i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (352)
T PRK12446 4 IVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKG 79 (352)
T ss_pred EEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHH
Confidence 677777776443222 346667777789999997544110 011111 1100 0010000 0 00
Q ss_pred ecChHHhhC--CCCCCcEEeccCchh---HHHHhhcCcccccc
Q 017266 251 WAPQEKVLG--HPSVACFLSHCGWNS---SIEGLSMGVPFLCW 288 (374)
Q Consensus 251 ~~pq~~lL~--~~~~~~~I~HgG~~s---~~eal~~GvP~l~~ 288 (374)
+..-..++. .|++ +|++||.-| ++.|...|+|.++.
T Consensus 80 ~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 80 VMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 111112343 4666 999999986 88999999999763
No 187
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=43.83 E-value=39 Score=31.24 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=38.7
Q ss_pred hhCCCCCCcEEeccCchhHHHHhh----cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLS----MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
+...+++ +|+=||=||++.+.. .++|++++-.. .+|... + ++.+++.+++.+++
T Consensus 65 ~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~---~---~~~~~~~~~l~~i~ 122 (296)
T PRK04539 65 LGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT---Q---IPREYMTDKLLPVL 122 (296)
T ss_pred cCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee---c---cCHHHHHHHHHHHH
Confidence 3345666 999999999999864 37788877320 123332 2 56777888888887
Q ss_pred cCh
Q 017266 333 NDD 335 (374)
Q Consensus 333 ~~~ 335 (374)
+++
T Consensus 123 ~g~ 125 (296)
T PRK04539 123 EGK 125 (296)
T ss_pred cCC
Confidence 653
No 188
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=43.50 E-value=72 Score=28.81 Aligned_cols=46 Identities=26% Similarity=0.363 Sum_probs=37.2
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEeccc
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTFA 55 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~~ 55 (374)
...+.++.+.+++.+ ..||+++.... .+..+|+..|+|.+.+.+.+
T Consensus 203 ~~~l~~l~~~ik~~~----v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 203 PADLKRLIDLAKEKG----VRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHHHHHcC----CCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 457888888888766 99999998765 66689999999998876554
No 189
>CHL00067 rps2 ribosomal protein S2
Probab=43.43 E-value=27 Score=30.94 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=25.7
Q ss_pred CcccEEEe-CCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVIT-DVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI~-D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
+.||+||+ |+-.- .+..=|.++|||+|++.=+.+.
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~~ 196 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILDTNCD 196 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCCC
Confidence 45887754 55543 7778899999999998766554
No 190
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=42.44 E-value=29 Score=31.35 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.8
Q ss_pred CcccEEE-eCCch-hHHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVI-TDVTV-GWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI-~D~~~-~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
..||+|| .|+-. ..+..=|.++|||+|++.=+.+.
T Consensus 156 ~~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~d 192 (258)
T PRK05299 156 GLPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTNCD 192 (258)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCCC
Confidence 4588874 56654 37778899999999998755543
No 191
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.21 E-value=39 Score=31.14 Aligned_cols=56 Identities=5% Similarity=0.095 Sum_probs=37.5
Q ss_pred hhCCCCCCcEEeccCchhHHHHhh----cCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLS----MGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+...+++ +|+=||-||++.++. +++|++++-. | +|..- + ++.+++.++++++
T Consensus 60 ~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~---------------G~lGFl~---~---~~~~~~~~~l~~i 116 (292)
T PRK03378 60 IGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINR---------------GNLGFLT---D---LDPDNALQQLSDV 116 (292)
T ss_pred cCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEEC---------------CCCCccc---c---cCHHHHHHHHHHH
Confidence 3344666 999999999999974 3677776632 1 12221 2 5678888888888
Q ss_pred hcCh
Q 017266 332 LNDD 335 (374)
Q Consensus 332 l~~~ 335 (374)
+++.
T Consensus 117 ~~g~ 120 (292)
T PRK03378 117 LEGH 120 (292)
T ss_pred HcCC
Confidence 7643
No 192
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.46 E-value=35 Score=31.06 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=36.8
Q ss_pred HHhhCCCCCCcEEeccCchhHHHHhh----cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHH
Q 017266 255 EKVLGHPSVACFLSHCGWNSSIEGLS----MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 255 ~~lL~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
..+...+++ +|+=||-||++.+.. .++|++++-.. .+|... + ++.+++.+.+.+
T Consensus 37 ~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G--------------~lGFL~---~---~~~~~~~~~l~~ 94 (272)
T PRK02231 37 EEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRG--------------NLGFLT---D---IDPKNAYEQLEA 94 (272)
T ss_pred HHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------CCcccc---c---CCHHHHHHHHHH
Confidence 444445677 999999999998755 36788776320 133322 1 456667777777
Q ss_pred Hhc
Q 017266 331 LLN 333 (374)
Q Consensus 331 ~l~ 333 (374)
+++
T Consensus 95 ~~~ 97 (272)
T PRK02231 95 CLE 97 (272)
T ss_pred HHh
Confidence 765
No 193
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.56 E-value=43 Score=31.13 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=37.8
Q ss_pred CCCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
..+++ +|+=||-||++.+... ++|++++... .+|... + +..+++.+++.+++++
T Consensus 71 ~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~---~---~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA---E---AEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec---c---CCHHHHHHHHHHHHcC
Confidence 44666 9999999999998764 7888877530 123332 2 4567777888888764
Q ss_pred h
Q 017266 335 D 335 (374)
Q Consensus 335 ~ 335 (374)
+
T Consensus 129 ~ 129 (306)
T PRK03372 129 D 129 (306)
T ss_pred C
Confidence 4
No 194
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.25 E-value=3.2e+02 Score=29.79 Aligned_cols=100 Identities=15% Similarity=0.048 Sum_probs=56.4
Q ss_pred cChHH---hhCCCCCCcEEe---ccCchhH-HHHhhcCcc---cccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcC
Q 017266 252 APQEK---VLGHPSVACFLS---HCGWNSS-IEGLSMGVP---FLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIIT 320 (374)
Q Consensus 252 ~pq~~---lL~~~~~~~~I~---HgG~~s~-~eal~~GvP---~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~ 320 (374)
+|+.+ +++.+++ |+. +-|+|-+ .|+++++.. +++++-+ -.-|.. +| -|+.+++ .+
T Consensus 448 l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEf---aGaa~~----L~~~AllVNP-----~D 513 (934)
T PLN03064 448 LDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEF---AGAAQS----LGAGAILVNP-----WN 513 (934)
T ss_pred CCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCC---CchHHH----hCCceEEECC-----CC
Confidence 55554 6677777 554 4588755 499999551 2222322 222222 33 4677776 57
Q ss_pred HHHHHHHHHHHhc-ChH-HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 321 RQEIYNRVKALLN-DDG-IKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 321 ~~~l~~~i~~~l~-~~~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
.++++++|.+.|+ +++ .+++.+++.+.++. -+...=.+.|++.|.
T Consensus 514 ~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~-----~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 514 ITEVAASIAQALNMPEEEREKRHRHNFMHVTT-----HTAQEWAETFVSELN 560 (934)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhccc-----CCHHHHHHHHHHHHH
Confidence 8999999999886 443 44444445444433 133333445555544
No 195
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=40.17 E-value=35 Score=30.12 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=25.7
Q ss_pred CcccEEE-eCCch-hHHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVI-TDVTV-GWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI-~D~~~-~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
+.||+|| .|+-. ..+..=|.++|||+|++.=+.+.
T Consensus 154 ~~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~~ 190 (225)
T TIGR01011 154 KLPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNCD 190 (225)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCCC
Confidence 4588775 56653 47778899999999998755543
No 196
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=39.85 E-value=75 Score=25.62 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=29.6
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEc
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVR 223 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~ 223 (374)
.+.+|++.+|+......+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4459999999997677888899998884 3577777654
No 197
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=37.76 E-value=2.7e+02 Score=24.05 Aligned_cols=144 Identities=12% Similarity=0.057 Sum_probs=67.9
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc-CCCcEEEeecChHHhhCCCCCCcE
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV-SDRGKFVEWAPQEKVLGHPSVACF 266 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pq~~lL~~~~~~~~ 266 (374)
++.|..|... ..-+..|.+.+..+.++.... .+.+.+-. ..++....--.+...+..+.+ +
T Consensus 12 vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~---------~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l--V 73 (205)
T TIGR01470 12 VLVVGGGDVA-------LRKARLLLKAGAQLRVIAEEL---------ESELTLLAEQGGITWLARCFDADILEGAFL--V 73 (205)
T ss_pred EEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCC---------CHHHHHHHHcCCEEEEeCCCCHHHhCCcEE--E
Confidence 6666665543 334566667787776554321 11111111 124444321123445666776 7
Q ss_pred EeccCchhHHH-----HhhcCccc--ccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh--HH
Q 017266 267 LSHCGWNSSIE-----GLSMGVPF--LCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD--GI 337 (374)
Q Consensus 267 I~HgG~~s~~e-----al~~GvP~--l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~ 337 (374)
|..-|...+.+ |-..|+|+ +--|-..|=. .-..+.+. ++-+.+........-+..+++.|.+++... .+
T Consensus 74 i~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~-~pa~~~~g-~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~ 151 (205)
T TIGR01470 74 IAATDDEELNRRVAHAARARGVPVNVVDDPELCSFI-FPSIVDRS-PVVVAISSGGAAPVLARLLRERIETLLPPSLGDL 151 (205)
T ss_pred EECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEE-EeeEEEcC-CEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHH
Confidence 77777654433 34567777 3333322211 11112221 233333322211234456777777777422 25
Q ss_pred HHHHHHHHHHHHHh
Q 017266 338 KANALKMKEMARKS 351 (374)
Q Consensus 338 ~~~a~~l~~~~~~~ 351 (374)
.+.+.++.+.+++.
T Consensus 152 ~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 152 ATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHhh
Confidence 55556666665543
No 198
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=37.52 E-value=61 Score=20.44 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHhcC-hHHHHHHHHH
Q 017266 320 TRQEIYNRVKALLND-DGIKANALKM 344 (374)
Q Consensus 320 ~~~~l~~~i~~~l~~-~~~~~~a~~l 344 (374)
++++|.+||..+.++ -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 468899999999876 5677777654
No 199
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=37.50 E-value=57 Score=30.26 Aligned_cols=75 Identities=12% Similarity=0.140 Sum_probs=54.3
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHH
Q 017266 198 VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIE 277 (374)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~e 277 (374)
..+.+..+++.+++.....+.||.+.... +-.++.++++...+-.||++ ||-..-..+++-
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~ 109 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD-----------------DSNELLPYLDYELIKKNPKI--FIGYSDITALHL 109 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc-----------------CHhhhhhhcCHHHHhhCCCE--EEeccHHHHHHH
Confidence 44567788999999999999999988651 12255666666666677776 888888877877
Q ss_pred Hhh--cCcccccccch
Q 017266 278 GLS--MGVPFLCWPYF 291 (374)
Q Consensus 278 al~--~GvP~l~~P~~ 291 (374)
+++ .|.+.+.-|+.
T Consensus 110 al~~~~g~~t~hGp~~ 125 (308)
T cd07062 110 AIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHhcCCeEEECccc
Confidence 774 37766666654
No 200
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=36.73 E-value=81 Score=26.28 Aligned_cols=31 Identities=16% Similarity=0.243 Sum_probs=22.9
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhcC
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLESL 214 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 214 (374)
+....+|+++||......+.++..++.|.+.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3344799999999765667777777777664
No 201
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.48 E-value=61 Score=29.38 Aligned_cols=54 Identities=7% Similarity=0.135 Sum_probs=35.4
Q ss_pred CCCCcEEeccCchhHHHHhhc-----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 261 PSVACFLSHCGWNSSIEGLSM-----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~-----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
+++ +|+=||-||++.++.. .+|++++-..+ .+|.. .+ ++.+++.+++.++++++
T Consensus 40 ~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL---~~---~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 40 ANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY---CD---FHIDDLDKMIQAITKEE 98 (264)
T ss_pred ccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc---cc---CCHHHHHHHHHHHHcCC
Confidence 455 9999999999999874 45665553200 12222 22 56788888888887644
No 202
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=36.41 E-value=1.2e+02 Score=25.86 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=43.1
Q ss_pred cccchhhhhhhHHHHHhHhcceeEeec----CC-----CCCcCHHHHH----HHHHHHhcChHHHHHHHHHHHHHHHh--
Q 017266 287 CWPYFVDQYQNRNYICDAWKVGSQFFP----DE-----NGIITRQEIY----NRVKALLNDDGIKANALKMKEMARKS-- 351 (374)
Q Consensus 287 ~~P~~~DQ~~na~~v~~~~g~G~~l~~----~~-----~~~~~~~~l~----~~i~~~l~~~~~~~~a~~l~~~~~~~-- 351 (374)
+.|...||..--..+-+...+|+.... .+ -..+..+.++ +.|.++|.|+.+-+|-.++...+.+|
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~~IIRnr~KI~Avi~NA~~ 101 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARA 101 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCchhHHhHHHHHHHHHHHHH
Confidence 345578888766554443466664421 00 0115555554 66778898888655555555554443
Q ss_pred ----hccCCChHHHHHHH
Q 017266 352 ----LGEGGSSFRNFESF 365 (374)
Q Consensus 352 ----~~~~g~~~~~~~~~ 365 (374)
-+|+||=...+-.+
T Consensus 102 ~l~i~~e~gSf~~ylW~f 119 (187)
T PRK10353 102 YLQMEQNGEPFADFVWSF 119 (187)
T ss_pred HHHHHHhcCCHHHHHhhc
Confidence 23466555555444
No 203
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.21 E-value=56 Score=29.78 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=36.5
Q ss_pred CCCCCcEEeccCchhHHHHhhc-CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 260 HPSVACFLSHCGWNSSIEGLSM-GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~-GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
.+++ +|+=||-||++.+... ..|++++-. - .+|.. .+ ++.+++.+++.++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~------------G--~lGFL---~~---~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINM------------G--GLGFL---TE---IEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEEC------------C--CCccC---cc---cCHHHHHHHHHHHHcCC
Confidence 4566 9999999999998873 456665521 0 12222 22 57788888888888653
No 204
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.22 E-value=1.5e+02 Score=21.86 Aligned_cols=33 Identities=18% Similarity=0.385 Sum_probs=19.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 017266 324 IYNRVKALLNDDGIKANALKMKEMARKSLGEGG 356 (374)
Q Consensus 324 l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g 356 (374)
....++++++|...-+|.++.++.....+...|
T Consensus 18 ~~~lL~~Ii~DttVPRNIRraA~~a~e~L~~e~ 50 (93)
T COG1698 18 VMQLLDEIIQDTTVPRNIRRAAEEAKEALNNEG 50 (93)
T ss_pred HHHHHHHHHccccccHHHHHHHHHHHHHHhCCC
Confidence 334455677787766666666666555554433
No 205
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=34.29 E-value=90 Score=25.81 Aligned_cols=99 Identities=11% Similarity=0.053 Sum_probs=53.2
Q ss_pred ccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee-c
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW-A 252 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 252 (374)
.++-+||.+.. ...|+.|.. ..+....++..+.+-.++=+++.... ..+- ..+......+ .
T Consensus 21 ~~lg~~La~~g---~~lv~Gg~~-----GlM~a~a~ga~~~gg~viGVlp~~l~-------~~~~---~~~~~i~~~~~~ 82 (159)
T TIGR00725 21 YRLGKELAKKG---HILINGGRT-----GVMEAVSKGAREAGGLVVGILPDEDF-------AGNP---YLTIKVKTGMNF 82 (159)
T ss_pred HHHHHHHHHCC---CEEEcCCch-----hHHHHHHHHHHHCCCeEEEECChhhc-------cCCC---CceEEEECCCcc
Confidence 34556776553 455564432 34566666666666666656543310 1110 0111122344 4
Q ss_pred ChHHhhCCCCCCcEEeccCchhHH---HHhhcCcccccccc
Q 017266 253 PQEKVLGHPSVACFLSHCGWNSSI---EGLSMGVPFLCWPY 290 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~HgG~~s~~---eal~~GvP~l~~P~ 290 (374)
+.+.++...+-..++--||.||+. |++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 555554433334466678888765 46789999999885
No 206
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=34.04 E-value=62 Score=27.84 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=32.0
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCC-chhHHHHHHHHhCCCe
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDV-TVGWALEIAEQMGIAR 48 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~-~~~~~~~~A~~lgiP~ 48 (374)
.+.|.++++.+.|++.+ .++.+... |-..+..+|..||||.
T Consensus 88 ~lT~Gi~eLv~~L~~~~----~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARG----TQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred ccCCCHHHHHHHHHHcC----CeEEEEcCChHHHHHHHHHHhCCcH
Confidence 35677889999999877 67766555 4457778999999996
No 207
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=34.00 E-value=1e+02 Score=26.45 Aligned_cols=47 Identities=28% Similarity=0.334 Sum_probs=34.9
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEecc
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~ 54 (374)
.|+.+++..+.....-...+||+|--.-.+..-|++.|||+..+..-
T Consensus 13 Nlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~k 59 (200)
T COG0299 13 NLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVLDRK 59 (200)
T ss_pred cHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEeccc
Confidence 46778887763221134889999998778999999999999886543
No 208
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=33.82 E-value=89 Score=29.43 Aligned_cols=41 Identities=24% Similarity=0.352 Sum_probs=26.8
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchh-------HHH---HHHHHhCCCeEEE
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVG-------WAL---EIAEQMGIARAAV 51 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~-------~~~---~~A~~lgiP~v~~ 51 (374)
...+.+++-+++.+ ||++|+-+.+- |+. .+.++++||.++-
T Consensus 67 ea~~~i~~mv~~~~----pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 67 EALKKILEMVKKLK----PDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHHHHHhcC----CCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 34444444455444 99999998742 332 3568999999874
No 209
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.70 E-value=67 Score=28.93 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=35.4
Q ss_pred CCCCCcEEeccCchhHHHHhh-cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 260 HPSVACFLSHCGWNSSIEGLS-MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~-~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
++++ +|+=||-||++.++. .++|++++-.. .+|... + ++.+++.+++.++++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~---~---~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLS---S---YTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCcccc---c---cCHHHHHHHHHHHHcCC
Confidence 3466 999999999999876 46777665310 122222 2 56677788888777543
No 210
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=32.71 E-value=70 Score=31.80 Aligned_cols=54 Identities=13% Similarity=0.172 Sum_probs=37.8
Q ss_pred CCCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
..+++ +|+=||-||++.+... ++|++++- +| +|.. .+ ++.+++.++|.++++
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN---------------~G~LGFL---t~---i~~~e~~~~Le~il~ 317 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFS---------------MGSLGFM---TP---FHSEQYRDCLDAILK 317 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe---------------CCCccee---cc---cCHHHHHHHHHHHHc
Confidence 34566 9999999999998764 46776652 12 3433 22 677888888888886
Q ss_pred Ch
Q 017266 334 DD 335 (374)
Q Consensus 334 ~~ 335 (374)
++
T Consensus 318 G~ 319 (508)
T PLN02935 318 GP 319 (508)
T ss_pred CC
Confidence 54
No 211
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=32.59 E-value=89 Score=31.50 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=35.2
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEecc
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~ 54 (374)
....+..++++++.+ +++||.|.. +..+|+++|++.|.+.+.
T Consensus 131 ~~e~~~~~~~l~~~G----~~~viG~~~---~~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 131 EEDARSCVNDLRARG----IGAVVGAGL---ITDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHHHHHHHHHHCC----CCEEECChH---HHHHHHHcCCceEEEecH
Confidence 456788889999888 999999983 468899999999988664
No 212
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=32.27 E-value=1e+02 Score=25.50 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=22.1
Q ss_pred CCcEEeccCch------hHHHHhhcCccccccc
Q 017266 263 VACFLSHCGWN------SSIEGLSMGVPFLCWP 289 (374)
Q Consensus 263 ~~~~I~HgG~~------s~~eal~~GvP~l~~P 289 (374)
.+++++|+|-| .+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 44488888854 7889999999999996
No 213
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=31.73 E-value=47 Score=28.62 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=25.9
Q ss_pred CcccEE-EeCCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
..||+| |+|+..- -+..=|.++|||+|++.=+.+.
T Consensus 107 ~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn~d 143 (196)
T TIGR01012 107 REPEVVVVTDPRADHQALKEASEVGIPIVALCDTDNP 143 (196)
T ss_pred CCCCEEEEECCccccHHHHHHHHcCCCEEEEeeCCCC
Confidence 447776 5577653 7778899999999998766543
No 214
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=31.46 E-value=49 Score=33.64 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=46.9
Q ss_pred ChHHhhCCCCCCcEEecc-Cc-hhHHHHhhcCcccccccchh-hhhhhHH--HHHhHhcceeEeecCCCCCcCHHHHHHH
Q 017266 253 PQEKVLGHPSVACFLSHC-GW-NSSIEGLSMGVPFLCWPYFV-DQYQNRN--YICDAWKVGSQFFPDENGIITRQEIYNR 327 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~Hg-G~-~s~~eal~~GvP~l~~P~~~-DQ~~na~--~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 327 (374)
+..+++.-++++.|-+-= =| -|-+||+++|||.|.-=+.+ -++.+-. .-.. .|+-++-+.+ -+.++..+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR~~----~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDRRD----KNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-SSS----S-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeCCC----CCHHHHHHH
Confidence 455666667776665521 12 37899999999999876632 2222111 1123 3665554444 466666666
Q ss_pred HHHHhcC-----h----HHHHHHHHHHHH
Q 017266 328 VKALLND-----D----GIKANALKMKEM 347 (374)
Q Consensus 328 i~~~l~~-----~----~~~~~a~~l~~~ 347 (374)
|.+.|.+ . ..|.+|+++|+.
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 6655521 1 177777777765
No 215
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=31.15 E-value=68 Score=30.31 Aligned_cols=39 Identities=23% Similarity=0.072 Sum_probs=24.7
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEe--CCch-hHHHHHHHHhCCCeEEEe
Q 017266 7 GCLKNFIEQVKESNDCEQISCVIT--DVTV-GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~--D~~~-~~~~~~A~~lgiP~v~~~ 52 (374)
..+.+++.+.+ ||+||+ |-+. .+++.+|..++||++-+-
T Consensus 57 ~~~~~~~~~~~-------Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hie 98 (346)
T PF02350_consen 57 IELADVLEREK-------PDAVLVLGDRNEALAAALAAFYLNIPVAHIE 98 (346)
T ss_dssp HHHHHHHHHHT--------SEEEEETTSHHHHHHHHHHHHTT-EEEEES
T ss_pred HHHHHHHHhcC-------CCEEEEEcCCchHHHHHHHHHHhCCCEEEec
Confidence 34555555543 898876 4454 477888999999976654
No 216
>KOG2199 consensus Signal transducing adaptor protein STAM/STAM2 [Signal transduction mechanisms]
Probab=30.97 E-value=75 Score=30.34 Aligned_cols=60 Identities=17% Similarity=0.335 Sum_probs=44.9
Q ss_pred cceeEeecCCCCCcCHHHHHHHHHHHhcChH-------HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcCC
Q 017266 306 KVGSQFFPDENGIITRQEIYNRVKALLNDDG-------IKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIGC 374 (374)
Q Consensus 306 g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~-------~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~ 374 (374)
.+|.+++.+ ++..++...++.++++.. +|.-+++|++.+++ ..+-..|..+.+.|++-|+
T Consensus 75 NCg~~~r~E----VsSr~F~~el~al~~~~~h~kV~~k~~~lv~eWsee~K~-----Dp~lsLi~~l~~klk~~g~ 141 (462)
T KOG2199|consen 75 NCGKRFRLE----VSSRDFTTELRALIESKAHPKVCEKMRDLVKEWSEEFKK-----DPSLSLISALYKKLKEEGI 141 (462)
T ss_pred hcchHHHHH----HhhhhHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHhcc-----CcchhHHHHHHHHHHHcCC
Confidence 567676665 788888888999987532 66666777777765 4667889999999988764
No 217
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=30.96 E-value=4.1e+02 Score=25.70 Aligned_cols=136 Identities=14% Similarity=0.122 Sum_probs=70.6
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCC-CchhhhhcCCCcEEEe-e-------cChHHhh
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKL-PDGFVERVSDRGKFVE-W-------APQEKVL 258 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-------~pq~~lL 258 (374)
+++...||.... ....+++.|.+.+..|-.+.... ...-+ |..+ +...++-.+.+ | ..+..+.
T Consensus 9 IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~----A~~fi~~~~l-~~l~~~~V~~~~~~~~~~~~~~hi~l~ 80 (399)
T PRK05579 9 IVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEA----AKKFVTPLTF-QALSGNPVSTDLWDPAAEAAMGHIELA 80 (399)
T ss_pred EEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHh----HHHHHhHHHH-HHhhCCceEccccccccCCCcchhhcc
Confidence 666666776332 34456677777777765555432 00001 1111 12222211221 2 2334444
Q ss_pred CCCCCCcEEeccCchhHHH-------------HhhcCcccccccchh----h---hhhhHHHHHhHhcceeEeec-----
Q 017266 259 GHPSVACFLSHCGWNSSIE-------------GLSMGVPFLCWPYFV----D---QYQNRNYICDAWKVGSQFFP----- 313 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~----D---Q~~na~~v~~~~g~G~~l~~----- 313 (374)
..+++ .+|.-|-+||+.. ++++++|+++.|-+. . ...|...+.+ +|+-+.-..
T Consensus 81 ~~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ii~P~~g~la 158 (399)
T PRK05579 81 KWADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRS-RGVEIIGPASGRLA 158 (399)
T ss_pred cccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHH-CCCEEECCCCcccc
Confidence 44453 4677777776553 255689999999432 2 3457777776 475543221
Q ss_pred ----CCCCCcCHHHHHHHHHHHhc
Q 017266 314 ----DENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 314 ----~~~~~~~~~~l~~~i~~~l~ 333 (374)
......+.++|...+.+.+.
T Consensus 159 ~~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 159 CGDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHhh
Confidence 11123567888888877763
No 218
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=30.68 E-value=1.1e+02 Score=25.88 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=22.3
Q ss_pred ccEEEeCCc--hhHHHHHHHHhCCCeEEE
Q 017266 25 ISCVITDVT--VGWALEIAEQMGIARAAV 51 (374)
Q Consensus 25 ~D~iI~D~~--~~~~~~~A~~lgiP~v~~ 51 (374)
+|.|++=-. .+.|..+|.+||+|+|..
T Consensus 54 id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 54 IDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred CCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 899987554 458889999999999985
No 219
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.54 E-value=2e+02 Score=26.82 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccc
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFA 55 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~ 55 (374)
..-|+.++.++++.| ++++|+-.-..-...+-+.+|+|+.++.-..
T Consensus 13 vhfFk~lI~elekkG----~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g 58 (346)
T COG1817 13 VHFFKNLIWELEKKG----HEVLITCRDFGVVTELLDLYGFPYKSIGKHG 58 (346)
T ss_pred hhHHHHHHHHHHhCC----eEEEEEEeecCcHHHHHHHhCCCeEeecccC
Confidence 356888999999877 9999998877778889999999998876665
No 220
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=30.40 E-value=39 Score=27.37 Aligned_cols=38 Identities=29% Similarity=0.355 Sum_probs=27.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHh-----cCCCCEEEEEcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLE-----SLHQPFLWVVRPD 225 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~-----~~~~~viw~~~~~ 225 (374)
+++|+.|+.....-..+..++.... .....++|+++..
T Consensus 4 vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 4 VVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 8999999987666677777777665 2335899999865
No 221
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=29.98 E-value=1.9e+02 Score=26.59 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=51.1
Q ss_pred cchhhhhcCCCCceEEEeecc---cccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee
Q 017266 175 TCLSWLDKQAIGSVIYVAFGS---AAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW 251 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS---~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (374)
++..+..+.. ++=+-+.. ........+..+.++.++.|..|++-+|... .+.... .....++
T Consensus 117 E~er~v~~~g---f~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~-------~~~~~~-----~~~~~p~ 181 (293)
T COG2159 117 ELERRVRELG---FVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGP-------GGAGLE-----KGHSDPL 181 (293)
T ss_pred HHHHHHHhcC---ceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCC-------CCcccc-----cCCCCch
Confidence 4555555433 33333322 2344556678899999999999999777541 111100 0000111
Q ss_pred cChHHhhCCCCCCcEEeccC--chhHHHHh
Q 017266 252 APQEKVLGHPSVACFLSHCG--WNSSIEGL 279 (374)
Q Consensus 252 ~pq~~lL~~~~~~~~I~HgG--~~s~~eal 279 (374)
.=..-+...|+++.++.|+| ..-..|++
T Consensus 182 ~~~~va~~fP~l~IVl~H~G~~~p~~~~a~ 211 (293)
T COG2159 182 YLDDVARKFPELKIVLGHMGEDYPWELEAI 211 (293)
T ss_pred HHHHHHHHCCCCcEEEEecCCCCchhHHHH
Confidence 11222557899999999999 66666663
No 222
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.92 E-value=2.5e+02 Score=23.42 Aligned_cols=92 Identities=18% Similarity=0.179 Sum_probs=58.3
Q ss_pred cChHH-hhCCCCCCcEEeccC---chhHHHHhhcCcccccccchh--hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHH
Q 017266 252 APQEK-VLGHPSVACFLSHCG---WNSSIEGLSMGVPFLCWPYFV--DQYQNRNYICDAWKVGSQFFPDENGIITRQEIY 325 (374)
Q Consensus 252 ~pq~~-lL~~~~~~~~I~HgG---~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~ 325 (374)
-+|.. |-.||++.+-+--.| ..|+.|-..+|.=-+- |.-. =+..|+.+.++ .|.=.++--+. .+.++|.
T Consensus 63 ~~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~~r-FgfPfI~aVkg---~~k~~Il 137 (176)
T COG3195 63 EERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLS-PEEFARFTELNAAYVER-FGFPFIIAVKG---NTKDTIL 137 (176)
T ss_pred HHHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCC-HHHHHHHHHHHHHHHHh-cCCceEEeecC---CCHHHHH
Confidence 35666 446888843333233 3567777777765542 2111 24569999998 59888877655 6899999
Q ss_pred HHHHHHhcChH---HHHHHHHHHHHH
Q 017266 326 NRVKALLNDDG---IKANALKMKEMA 348 (374)
Q Consensus 326 ~~i~~~l~~~~---~~~~a~~l~~~~ 348 (374)
++..+-++|++ ++..+.++.++.
T Consensus 138 ~a~~~Rl~n~~e~E~~tAl~eI~rIA 163 (176)
T COG3195 138 AAFERRLDNDREQEFATALAEIERIA 163 (176)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99888887776 555555554443
No 223
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=29.85 E-value=55 Score=28.39 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=25.4
Q ss_pred cccEE-EeCCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 24 QISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 24 ~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
.||+| |+|+..- -+..=|.++|||+|++.=+.+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn~d 149 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTDNL 149 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCCCC
Confidence 47776 5577553 7777899999999998766543
No 224
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=29.70 E-value=5.1e+02 Score=27.78 Aligned_cols=168 Identities=11% Similarity=0.043 Sum_probs=86.7
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCcc----ccCCCchhhhhcCCCcE---EEeecChHHhhCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRS----HAKLPDGFVERVSDRGK---FVEWAPQEKVLGH 260 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~pq~~lL~~ 260 (374)
++|+.+=-+...|......-++.+.+.|.+|+..+|.....+. .-.+...-. .+..... -.+-++..++-..
T Consensus 573 LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e-d~~~~~~TG~efD~ls~~~~~~~ 651 (972)
T KOG0202|consen 573 LTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE-DVSSMALTGSEFDDLSDEELDDA 651 (972)
T ss_pred eEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc-cccccccchhhhhcCCHHHHHHH
Confidence 6777665555666677777788888888888888886521100 000000000 0000101 0111221111111
Q ss_pred CCCCcEEeccCc---hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 261 PSVACFLSHCGW---NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 261 ~~~~~~I~HgG~---~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
++...++.++-- .-+.|++..-.-++. +.+|--..|-.+.++ .+|+.+.... .+-=++|-+-+|.|+.+
T Consensus 652 ~~~~~vFaR~~P~HK~kIVeaLq~~geivA--MTGDGVNDApALK~A-dIGIAMG~~G-----TdVaKeAsDMVL~DDnF 723 (972)
T KOG0202|consen 652 VRRVLVFARAEPQHKLKIVEALQSRGEVVA--MTGDGVNDAPALKKA-DIGIAMGISG-----TDVAKEASDMVLADDNF 723 (972)
T ss_pred hhcceEEEecCchhHHHHHHHHHhcCCEEE--ecCCCccchhhhhhc-ccceeecCCc-----cHhhHhhhhcEEecCcH
Confidence 111224444432 246677666555444 367777777677765 7888776421 11223344456777765
Q ss_pred HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHc
Q 017266 338 KANALKMKEMARKSLGEGGSSFRNFESFISQLKAI 372 (374)
Q Consensus 338 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 372 (374)
..= -+|++||-+-+.++..||.++...
T Consensus 724 stI--------vaAVEEGr~IynNik~Fir~~lSs 750 (972)
T KOG0202|consen 724 STI--------VAAVEEGRAIYNNIKNFIRYLLSS 750 (972)
T ss_pred HHH--------HHHHHHhHHHHHHHHHHHHHHHhh
Confidence 432 234566667788888888887654
No 225
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.59 E-value=1.7e+02 Score=24.35 Aligned_cols=47 Identities=17% Similarity=0.316 Sum_probs=32.2
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCch----------hHHHHHHHHhCCCeEEEecc
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTV----------GWALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~----------~~~~~~A~~lgiP~v~~~~~ 54 (374)
.+++.+..|+.-.=|..||+|++---+ --+..+|+++|+|++-.+..
T Consensus 108 nvrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~ 164 (219)
T KOG0081|consen 108 NVRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSAC 164 (219)
T ss_pred HHHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccc
Confidence 356667777544334669999985432 25778999999998875433
No 226
>PLN02929 NADH kinase
Probab=29.57 E-value=75 Score=29.41 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=42.9
Q ss_pred CCCCCCcEEeccCchhHHHHhh---cCcccccccchh------hhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHH
Q 017266 259 GHPSVACFLSHCGWNSSIEGLS---MGVPFLCWPYFV------DQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~---~GvP~l~~P~~~------DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
..+++ +|+-||-||++.+.. .++|++++-... .+++|.-. +.. -.|.... ++.+++.+++.
T Consensus 63 ~~~Dl--vi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r-~lGfL~~------~~~~~~~~~L~ 132 (301)
T PLN02929 63 RDVDL--VVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARR-STGHLCA------ATAEDFEQVLD 132 (301)
T ss_pred CCCCE--EEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-ccc-Ccccccc------CCHHHHHHHHH
Confidence 34566 999999999999854 468888875421 12333311 110 2444432 56788999999
Q ss_pred HHhcCh
Q 017266 330 ALLNDD 335 (374)
Q Consensus 330 ~~l~~~ 335 (374)
+++++.
T Consensus 133 ~il~g~ 138 (301)
T PLN02929 133 DVLFGR 138 (301)
T ss_pred HHHcCC
Confidence 998754
No 227
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=29.52 E-value=2.8e+02 Score=23.84 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=66.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcC-CCcEEEeecChHHhhCCCCCCcE
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVS-DRGKFVEWAPQEKVLGHPSVACF 266 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pq~~lL~~~~~~~~ 266 (374)
++.|..|..+ ...++.|.+.+..+.++. +. ..+.+.+... ..+.......+...+..+++ +
T Consensus 13 vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~--------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl--V 74 (202)
T PRK06718 13 VVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE--------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL--V 74 (202)
T ss_pred EEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC--------CCHHHHHHHhCCCEEEEecCCChhhcCCceE--E
Confidence 6666666543 345666666777765553 22 1122211111 22333333334445667777 8
Q ss_pred EeccCchhHHHHhh----cCcccccccchhhhhhhHH-----HHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC--h
Q 017266 267 LSHCGWNSSIEGLS----MGVPFLCWPYFVDQYQNRN-----YICDAWKVGSQFFPDENGIITRQEIYNRVKALLND--D 335 (374)
Q Consensus 267 I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~-----~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~--~ 335 (374)
|+--+--.+.+.++ .++++-+ .|.+..+. .+.+. ++-+.+........-+..|++.|.+++.. .
T Consensus 75 iaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~~ie~~~~~~~~ 149 (202)
T PRK06718 75 IAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRDELEALYDESYE 149 (202)
T ss_pred EEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHHHHHHHcchhHH
Confidence 88766655555544 3443322 34333221 12221 23333332221123345577777766622 1
Q ss_pred HHHHHHHHHHHHHHHh
Q 017266 336 GIKANALKMKEMARKS 351 (374)
Q Consensus 336 ~~~~~a~~l~~~~~~~ 351 (374)
.+-+.+.++.+.++..
T Consensus 150 ~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 150 SYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 2566666666666653
No 228
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=29.42 E-value=96 Score=28.96 Aligned_cols=28 Identities=25% Similarity=0.039 Sum_probs=20.9
Q ss_pred cccEEEeCCch---hHHHHHHHHhCCCeEEE
Q 017266 24 QISCVITDVTV---GWALEIAEQMGIARAAV 51 (374)
Q Consensus 24 ~~D~iI~D~~~---~~~~~~A~~lgiP~v~~ 51 (374)
+||+|++-... .++..+|..+|||++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~ 118 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHV 118 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 39999987432 35667888999998864
No 229
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=29.42 E-value=1.4e+02 Score=26.35 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=31.8
Q ss_pred hhCCCCCCcEEeccCch--hHHHHhhc--Ccccccc------------cchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 257 VLGHPSVACFLSHCGWN--SSIEGLSM--GVPFLCW------------PYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~--s~~eal~~--GvP~l~~------------P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
+.++|+++.++.|+|.. ...+++.. ..|-+.+ +....+..-.+.+.. .|.-..+-..+
T Consensus 159 ~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~-~g~drilfGSD 232 (273)
T PF04909_consen 159 LERFPDLRIILAHLGGPFPWWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDE-FGPDRILFGSD 232 (273)
T ss_dssp HHHSTTSEEEESGGGTTHHHHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHH-HTGGGEEEE--
T ss_pred HHHhcCCeEEEecCcccchhHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHH-hCCceEEecCC
Confidence 45789999999999999 34333222 2232222 222333333444455 47777776554
No 230
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.32 E-value=73 Score=32.46 Aligned_cols=54 Identities=19% Similarity=0.414 Sum_probs=36.8
Q ss_pred CCCCCcEEeccCchhHHHHhhc----CcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 260 HPSVACFLSHCGWNSSIEGLSM----GVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
.+++ +|+-||=||++.+... ++|++++-+. .+|.. .+ ++.+++.+++.++++++
T Consensus 348 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL---~~---~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 348 EISH--IISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFL---TE---FSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcC---cc---cCHHHHHHHHHHHHcCC
Confidence 3455 9999999999998763 7788776420 12222 22 56788888888887653
No 231
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=29.21 E-value=1.6e+02 Score=21.62 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCC
Q 017266 323 EIYNRVKALLNDDGIKANALKMKEMARKSLGEGGS 357 (374)
Q Consensus 323 ~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~ 357 (374)
+....+.++++|.+.-+|.++.+....+.+...+-
T Consensus 10 ~~~~~L~~I~~D~sVPRNIRr~a~ea~~~L~~e~~ 44 (85)
T PF03685_consen 10 QAIQMLERIINDTSVPRNIRRAAEEAKEILNNEEE 44 (85)
T ss_dssp HHHHHHHHHHT-TTS-HHHHHHHHHHHHHCT-TTS
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHhCCCc
Confidence 34455667777877666666666665555544554
No 232
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=28.98 E-value=59 Score=29.14 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=25.7
Q ss_pred CcccEE-EeCCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
..||+| |+|+..- -+..=|.++|||+|+++=+.+.
T Consensus 117 ~~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTds~ 153 (249)
T PTZ00254 117 MEPRLLIVTDPRTDHQAIREASYVNIPVIALCDTDSP 153 (249)
T ss_pred CCCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCCCC
Confidence 346665 5677654 7777899999999998766543
No 233
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.50 E-value=78 Score=28.90 Aligned_cols=29 Identities=10% Similarity=0.078 Sum_probs=22.4
Q ss_pred CCCCCcEEeccCchhHHHHhh---cCcccccccc
Q 017266 260 HPSVACFLSHCGWNSSIEGLS---MGVPFLCWPY 290 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~---~GvP~l~~P~ 290 (374)
.+++ +|+-||-||+++++. .++|++++|.
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 3455 999999999999874 3568877764
No 234
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=28.42 E-value=85 Score=26.24 Aligned_cols=29 Identities=28% Similarity=0.135 Sum_probs=20.5
Q ss_pred cccEEEeCCchh-H-HHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDVTVG-W-ALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~~~~-~-~~~~A~~lgiP~v~~~ 52 (374)
+||+||...... . ....-+.+|||++.+.
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 499999865433 2 4455678999998874
No 235
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=28.39 E-value=1.5e+02 Score=26.97 Aligned_cols=46 Identities=20% Similarity=0.298 Sum_probs=36.1
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEecc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~ 54 (374)
-...+.++++.+++.+ ..||+++.... .+..+|+..|+|.+.+.+.
T Consensus 205 s~~~l~~l~~~ik~~~----v~~if~e~~~~~~~~~~la~~~g~~v~~ld~l 252 (282)
T cd01017 205 SPKQLAELVEFVKKSD----VKYIFFEENASSKIAETLAKETGAKLLVLNPL 252 (282)
T ss_pred CHHHHHHHHHHHHHcC----CCEEEEeCCCChHHHHHHHHHcCCcEEEeccc
Confidence 3457788888888766 89999999875 5667999999998776543
No 236
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=28.20 E-value=46 Score=17.33 Aligned_cols=18 Identities=17% Similarity=0.802 Sum_probs=13.8
Q ss_pred ccchhhhhcCCCCceEEE
Q 017266 174 STCLSWLDKQAIGSVIYV 191 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~v 191 (374)
..|..|.+.+.+...+|.
T Consensus 3 ikCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 3 IKCINWFESRGEERFLYL 20 (22)
T ss_pred cEEeehhhhCCceeEEEE
Confidence 457899998888767775
No 237
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]
Probab=27.83 E-value=39 Score=34.31 Aligned_cols=76 Identities=18% Similarity=0.067 Sum_probs=52.2
Q ss_pred EeccCchhHHHHhhcCcccccccc-------hhhhhhh---------------HHHHHhHhcceeEeecCCCCCcCHHHH
Q 017266 267 LSHCGWNSSIEGLSMGVPFLCWPY-------FVDQYQN---------------RNYICDAWKVGSQFFPDENGIITRQEI 324 (374)
Q Consensus 267 I~HgG~~s~~eal~~GvP~l~~P~-------~~DQ~~n---------------a~~v~~~~g~G~~l~~~~~~~~~~~~l 324 (374)
.-|.|..++..|++.+.+++++=+ ++.|+.= ...+++..|+...-..+ ..+.+++
T Consensus 457 F~HsGi~~l~nAV~n~~~~~~vvLdN~~tAMTGgQp~pg~~~~~~g~~~~~i~iee~~r~~Gv~~v~~vd---p~~~~~~ 533 (640)
T COG4231 457 FFHSGILALINAVYNKANILVVVLDNRTTAMTGGQPHPGTGVAAEGTKSTAIVIEEVVRAMGVEDVETVD---PYDVKEL 533 (640)
T ss_pred ccccCcHHHHHHHhcCCCeEEEEEeccchhccCCCCCCCcccccCCCccceeEhhHhhhhcCceeeeccC---CcchHHH
Confidence 358999999999999999988654 5667654 23455533333322222 3788889
Q ss_pred HHHHHHHhcChH-----HHHHHHHHH
Q 017266 325 YNRVKALLNDDG-----IKANALKMK 345 (374)
Q Consensus 325 ~~~i~~~l~~~~-----~~~~a~~l~ 345 (374)
.+++++.++-+. +++.+...+
T Consensus 534 ~~~~keale~~gpsViiak~~Cal~~ 559 (640)
T COG4231 534 SEAIKEALEVPGPSVIIAKRECALEK 559 (640)
T ss_pred HHHHHHHhcCCCceEEEEcCcchhhh
Confidence 999999987554 777776665
No 238
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=27.37 E-value=1e+02 Score=24.28 Aligned_cols=37 Identities=11% Similarity=0.372 Sum_probs=26.7
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhc--CCCCEEEEEc
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLES--LHQPFLWVVR 223 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~--~~~~viw~~~ 223 (374)
.+++++|||......+.+..+.+.+++ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 389999999866555677888888854 3456667764
No 239
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=26.42 E-value=1.6e+02 Score=24.77 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=29.1
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh-HHHHHHHHhCCCeEE
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG-WALEIAEQMGIARAA 50 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~-~~~~~A~~lgiP~v~ 50 (374)
..|.+++.+++++..+ .-++|+.-..- =...+++.||||++.
T Consensus 47 ~tpe~~~W~~e~k~~g----i~v~vvSNn~e~RV~~~~~~l~v~fi~ 89 (175)
T COG2179 47 ATPELRAWLAELKEAG----IKVVVVSNNKESRVARAAEKLGVPFIY 89 (175)
T ss_pred CCHHHHHHHHHHHhcC----CEEEEEeCCCHHHHHhhhhhcCCceee
Confidence 4577788888887766 66777666443 444567888888776
No 240
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=26.04 E-value=1.1e+02 Score=29.73 Aligned_cols=26 Identities=15% Similarity=0.046 Sum_probs=21.4
Q ss_pred CcccEEEeCCchhHHHHHHHHhCCCeEEE
Q 017266 23 EQISCVITDVTVGWALEIAEQMGIARAAV 51 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~lgiP~v~~ 51 (374)
.+||++|.. ..+..+|+++|||.+.+
T Consensus 349 ~~pDl~Ig~---s~~~~~a~~~giP~~r~ 374 (416)
T cd01980 349 YRPDLAIGT---TPLVQYAKEKGIPALYY 374 (416)
T ss_pred cCCCEEEeC---ChhhHHHHHhCCCEEEe
Confidence 349999987 45777999999999875
No 241
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=25.99 E-value=1.3e+02 Score=26.90 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=34.9
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh-------------------HHHHHHHHhCCCeEEEecc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG-------------------WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~-------------------~~~~~A~~lgiP~v~~~~~ 54 (374)
....+++.+++++... .+.++||+|.+.. -...+|.+++||+++.+-.
T Consensus 113 ~~~~i~~~i~~~~~~~--~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~sQl 179 (259)
T PF03796_consen 113 TIDDIESKIRRLKREG--KKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIALSQL 179 (259)
T ss_dssp BHHHHHHHHHHHHHHS--TTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEEEEB
T ss_pred CHHHHHHHHHHHHhhc--cCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEcccc
Confidence 3456777888887664 4589999998732 1345789999999997543
No 242
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=25.76 E-value=89 Score=27.88 Aligned_cols=46 Identities=22% Similarity=0.428 Sum_probs=33.3
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEecc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~ 54 (374)
-...+.++.+.+++.+ ..+|+++.... .+..+|+.+|+|.+.+.+.
T Consensus 184 s~~~l~~l~~~ik~~~----v~~i~~e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 184 SPKDLAELIKLIKENK----VKCIFTEPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp -HHHHHHHHHHHHHTT-----SEEEEETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred CHHHHHHHHHHhhhcC----CcEEEecCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 4557788888888766 99999998765 5677999999999776544
No 243
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=25.72 E-value=7.3e+02 Score=25.36 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=49.4
Q ss_pred CCcEEeccCchhHHHHhhc---Ccccccccchhhh--hhhH-HHHHhHh--cceeEee-cCCCCCcCHHHHHHHHHHHhc
Q 017266 263 VACFLSHCGWNSSIEGLSM---GVPFLCWPYFVDQ--YQNR-NYICDAW--KVGSQFF-PDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 263 ~~~~I~HgG~~s~~eal~~---GvP~l~~P~~~DQ--~~na-~~v~~~~--g~G~~l~-~~~~~~~~~~~l~~~i~~~l~ 333 (374)
.++||.=+|.-.-+-.+.+ -+|+|++|....- -.++ -.+.+ + |+.+..- .+. ..++.-++..|-. +.
T Consensus 466 ~~v~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~-~p~g~pv~~v~i~~--~~~aa~~a~~i~~-~~ 541 (577)
T PLN02948 466 LQVIIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQ-MPRGVPVATVAIGN--ATNAGLLAVRMLG-AS 541 (577)
T ss_pred CCEEEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhc-CCCCCeEEEEecCC--hHHHHHHHHHHHh-cC
Confidence 3459998887544444433 4699999985321 1222 22333 4 4322221 111 1455555544422 35
Q ss_pred ChHHHHHHHHHHHHHHHhhccCC
Q 017266 334 DDGIKANALKMKEMARKSLGEGG 356 (374)
Q Consensus 334 ~~~~~~~a~~l~~~~~~~~~~~g 356 (374)
|++++++.+..++.+++.+.+..
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~ 564 (577)
T PLN02948 542 DPDLLDKMEAYQEDMRDMVLEKA 564 (577)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhh
Confidence 77888888888888887654433
No 244
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=25.47 E-value=3.5e+02 Score=25.09 Aligned_cols=102 Identities=10% Similarity=0.105 Sum_probs=60.2
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCc
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVAC 265 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~ 265 (374)
+.+-.|.+|++. +++++-+...|.+|+.. ... .... . ....+.+..++|+.+++
T Consensus 146 ktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~-d~~-------~~~~-------~--~~~~~~~l~ell~~sDv-- 199 (311)
T PRK08410 146 KKWGIIGLGTIG-------KRVAKIAQAFGAKVVYY-STS-------GKNK-------N--EEYERVSLEELLKTSDI-- 199 (311)
T ss_pred CEEEEECCCHHH-------HHHHHHHhhcCCEEEEE-CCC-------cccc-------c--cCceeecHHHHhhcCCE--
Confidence 448888888874 23444444457776543 321 0000 0 01235577889999998
Q ss_pred EEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHHH
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
++-|+-.+.- .....|++.++. ++ -++.++..+.+.++.+.|.++++.
T Consensus 200 v~lh~Plt~~----------------T~~li~~~~~~~-Mk~~a~lIN~aRG~vVDe~AL~~AL~~ 248 (311)
T PRK08410 200 ISIHAPLNEK----------------TKNLIAYKELKL-LKDGAILINVGRGGIVNEKDLAKALDE 248 (311)
T ss_pred EEEeCCCCch----------------hhcccCHHHHHh-CCCCeEEEECCCccccCHHHHHHHHHc
Confidence 8887643211 234567777777 45 445566666566788888877763
No 245
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.37 E-value=2.3e+02 Score=23.71 Aligned_cols=47 Identities=13% Similarity=0.155 Sum_probs=34.2
Q ss_pred ccchHHHHHHHHHhHhcCCCCccc--EEEeCCc--------hhHHHHHHHHhCCCeEEEec
Q 017266 3 AVMPGCLKNFIEQVKESNDCEQIS--CVITDVT--------VGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~~~~~~~~D--~iI~D~~--------~~~~~~~A~~lgiP~v~~~~ 53 (374)
..+.+.+.+.++++++.. +. ++|+.-- .--+..+++.||||++....
T Consensus 58 ~~i~~~~~~~~~~l~~~~----~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h~~ 114 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQF----GKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRHRA 114 (168)
T ss_pred CcCCHHHHHHHHHHHHHC----CCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEeCC
Confidence 457789999999998766 54 4444432 33677899999999887654
No 246
>COG1515 Nfi Deoxyinosine 3'endonuclease (endonuclease V) [DNA replication, recombination, and repair]
Probab=25.26 E-value=55 Score=28.45 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=20.2
Q ss_pred CcccEEEeCCch-------hHHHHHHHHhCCCeEEEe
Q 017266 23 EQISCVITDVTV-------GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 23 ~~~D~iI~D~~~-------~~~~~~A~~lgiP~v~~~ 52 (374)
.+||+|++|..- .++..++=.+++|+|.+.
T Consensus 94 ~~~d~ilVDG~GiaHPR~~GlAsH~Gv~l~~PtIGVA 130 (212)
T COG1515 94 VKPDLLLVDGHGIAHPRRLGLASHIGVLLDVPTIGVA 130 (212)
T ss_pred CCCCEEEEcCcceecCcccChhheeeeeeCCCceeEe
Confidence 679999999862 244445555667777753
No 247
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=25.25 E-value=1.1e+02 Score=29.76 Aligned_cols=26 Identities=12% Similarity=0.173 Sum_probs=20.9
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~ 52 (374)
+||++|.+. ....+|+++|+|.+.++
T Consensus 370 ~pdliig~~---~~~~~a~~~gip~~~~~ 395 (430)
T cd01981 370 EPELIFGTQ---MERHIGKRLDIPCAVIS 395 (430)
T ss_pred CCCEEEecc---hhhHHHHHcCCCEEEEe
Confidence 399999988 35557899999998864
No 248
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.23 E-value=2.5e+02 Score=23.13 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=44.4
Q ss_pred ccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 288 WPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND-DGIKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 288 ~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
.|....+..+|+.+++. .-+ +.. -..+.|.+.+.+++.| +.-+-.+.+++..+.++ |-.....+.+++
T Consensus 78 yPWt~~~L~aa~el~ee-~ee--Ls~-----deke~~~~sl~dL~~d~PkT~vA~~rfKk~~~K~---g~~v~~~~~dIl 146 (158)
T PF10083_consen 78 YPWTENALEAANELIEE-DEE--LSP-----DEKEQFKESLPDLTKDTPKTKVAATRFKKILSKA---GSIVGDAIRDIL 146 (158)
T ss_pred CchHHHHHHHHHHHHHH-hhc--CCH-----HHHHHHHhhhHHHhhcCCccHHHHHHHHHHHHHH---hHHHHHHHHHHH
Confidence 57777888888877763 111 111 2346689999998854 55777777888887775 333445555544
Q ss_pred HH
Q 017266 367 SQ 368 (374)
Q Consensus 367 ~~ 368 (374)
-+
T Consensus 147 Vd 148 (158)
T PF10083_consen 147 VD 148 (158)
T ss_pred HH
Confidence 33
No 249
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=25.03 E-value=3e+02 Score=25.00 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=48.7
Q ss_pred ceEEEeecccccCCHHHHHHH---HHHHh-cCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEe-ecChH--HhhC
Q 017266 187 SVIYVAFGSAAVLSQQQLEEL---ALGLE-SLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVE-WAPQE--KVLG 259 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~---~~~l~-~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pq~--~lL~ 259 (374)
+.|.|+..+......+..+.+ ++.+. +.+.++++..-.... + ....+.+.+..+++..+.. .-|+. .+++
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~--D-~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~ 249 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQ--D-LPLARALRDQLLGPAEVLSPLDPEELLGLFA 249 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcch--h-HHHHHHHHHhcCCCcEEEecCCHHHHHHHHh
Confidence 467777755333344334444 33443 347777766432100 0 0011122222233223332 22222 4778
Q ss_pred CCCCCcEEeccCchhHHHHhhcCcccccccc
Q 017266 260 HPSVACFLSHCGWNSSIEGLSMGVPFLCWPY 290 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 290 (374)
++++ +|+-==+ +..-|+.+|+|.+.+.+
T Consensus 250 ~~~~--vI~~RlH-~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 250 SARL--VIGMRLH-ALILAAAAGVPFVALSY 277 (298)
T ss_pred hCCE--EEEechH-HHHHHHHcCCCEEEeec
Confidence 8887 8874333 35557889999998853
No 250
>PF00318 Ribosomal_S2: Ribosomal protein S2; InterPro: IPR001865 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal S2 proteins have been shown to belong to a family that includes 40S ribosomal subunit 40kDa proteins, putative laminin-binding proteins, NAB-1 protein and 29.3kDa protein from Haloarcula marismortui [, ]. The laminin-receptor proteins are thus predicted to be the eukaryotic homologue of the eubacterial S2 risosomal proteins [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2QNH_c 3MR8_B 3PYS_B 3MS0_B 3PYN_B 1VOZ_B 2OW8_c 3PYQ_B 3D5C_B 3PYU_B ....
Probab=24.96 E-value=82 Score=27.44 Aligned_cols=35 Identities=23% Similarity=0.164 Sum_probs=24.2
Q ss_pred CcccEEEe-CCch-hHHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVIT-DVTV-GWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI~-D~~~-~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
..||+||+ |+-. ..+..=|..+|||+|++.-+.+.
T Consensus 142 ~~P~~vii~~~~~~~~~i~Ea~~l~IP~i~i~Dtn~~ 178 (211)
T PF00318_consen 142 KLPDLVIILDPNKNKNAIREANKLNIPTIAIVDTNCN 178 (211)
T ss_dssp SSBSEEEESSTTTTHHHHHHHHHTTS-EEEEESTTS-
T ss_pred ccCcEEEEecccccchhHHHHHhcCceEEEeecCCCC
Confidence 45888754 5544 47778899999999998766544
No 251
>PHA02542 41 41 helicase; Provisional
Probab=24.93 E-value=1.3e+02 Score=29.80 Aligned_cols=47 Identities=11% Similarity=0.121 Sum_probs=32.4
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchhH----------------------HHHHHHHhCCCeEEEec
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVGW----------------------ALEIAEQMGIARAAVVT 53 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~----------------------~~~~A~~lgiP~v~~~~ 53 (374)
...++..+++++...+ .++|+||.|++... ...+|++++||+++++-
T Consensus 284 ~~~ir~~~rrlk~~~g-~~~dlVvIDYLqL~~~~~~~~~~~nr~~ei~~Isr~LK~lAkel~vpVi~lsQ 352 (473)
T PHA02542 284 AGHFRALLNELKLKKN-FKPDVIIVDYLGICASSRLRVSSENSYTYVKAIAEELRGLAVEHDVVVWTAAQ 352 (473)
T ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEechhhccCCcccCCCCChHHHHHHHHHHHHHHHHHhCCeEEEEEe
Confidence 3467777777764321 34899999997542 13579999999999753
No 252
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=24.78 E-value=2.7e+02 Score=23.52 Aligned_cols=101 Identities=11% Similarity=-0.015 Sum_probs=52.8
Q ss_pred cchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC-
Q 017266 175 TCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP- 253 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 253 (374)
++-++|.++. ..+|+.|. ....+..+.++..+.+-.++=+...... ..+.+.. ..+...+++...
T Consensus 23 ~lG~~la~~g---~~lV~GGg----~~GlM~a~a~ga~~~gG~viGi~p~~l~---~~~~~~~----~~~~~i~~~~~~~ 88 (178)
T TIGR00730 23 ELGAYLAGQG---WGLVYGGG----RVGLMGAIADAAMENGGTAVGVNPSGLF---SGEVVHQ----NLTELIEVNGMHE 88 (178)
T ss_pred HHHHHHHHCC---CEEEECCC----hHhHHHHHHHHHHhcCCeEEEecchhhh---hhhccCC----CCCceEEECCHHH
Confidence 3445665543 55666664 2345677777777766666555432210 0000000 012223444443
Q ss_pred hHHhhCCCCCCcEEeccCchhHHHHhh---------cCccccccc
Q 017266 254 QEKVLGHPSVACFLSHCGWNSSIEGLS---------MGVPFLCWP 289 (374)
Q Consensus 254 q~~lL~~~~~~~~I~HgG~~s~~eal~---------~GvP~l~~P 289 (374)
...+|-..+-..++--||.||+-|... +.+|++++=
T Consensus 89 Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 89 RKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 334444333334666788999888743 488888864
No 253
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=24.57 E-value=4.3e+02 Score=22.31 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=29.3
Q ss_pred Ccccccccch----hhh---hhhHHHHHhHhcceeEeecC---------CCCCcCHHHHHHHHHHHh
Q 017266 282 GVPFLCWPYF----VDQ---YQNRNYICDAWKVGSQFFPD---------ENGIITRQEIYNRVKALL 332 (374)
Q Consensus 282 GvP~l~~P~~----~DQ---~~na~~v~~~~g~G~~l~~~---------~~~~~~~~~l~~~i~~~l 332 (374)
++|+++.|-. ... ..|..++.+ +|+=+.-... ....-+.++|.+.+.+.+
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~-~G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKE-DGVQEIEPKEGLLACGDEGYGALADIETILETIENTL 178 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHH-CCCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHh
Confidence 8999999952 232 456777776 4654433221 122346677777766655
No 254
>PRK04330 hypothetical protein; Provisional
Probab=24.54 E-value=2.2e+02 Score=20.96 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=14.0
Q ss_pred HHHHHHHhcChH----HHHHHHHHHHHHHH
Q 017266 325 YNRVKALLNDDG----IKANALKMKEMARK 350 (374)
Q Consensus 325 ~~~i~~~l~~~~----~~~~a~~l~~~~~~ 350 (374)
...+.++.+|.+ +|+.|.+..+.+++
T Consensus 15 ~~~L~~I~~D~sVPRNIRraa~ea~~~L~~ 44 (88)
T PRK04330 15 IQMLEEIINDTSVPRNIRRAATEAKEILLN 44 (88)
T ss_pred HHHHHHHhcCCCCChHHHHHHHHHHHHHhC
Confidence 334456667776 45555555555444
No 255
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=24.35 E-value=1.6e+02 Score=25.90 Aligned_cols=41 Identities=10% Similarity=0.008 Sum_probs=30.4
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHH--H-HHHHHhCCCeEEE
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWA--L-EIAEQMGIARAAV 51 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~--~-~~A~~lgiP~v~~ 51 (374)
..+.+.-++|++.+ .|+|+.|.+.+.. . .+++.+|+|++.-
T Consensus 165 ~~l~~Aa~~L~~~g----adlIvLDCmGYt~~~r~~~~~~~g~PVlLs 208 (221)
T PF07302_consen 165 EELAAAARELAEQG----ADLIVLDCMGYTQEMRDIVQRALGKPVLLS 208 (221)
T ss_pred HHHHHHHHHHHhcC----CCEEEEECCCCCHHHHHHHHHHhCCCEEeH
Confidence 45556666777666 9999999987622 2 4788899998873
No 256
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=24.05 E-value=1.8e+02 Score=27.05 Aligned_cols=45 Identities=13% Similarity=0.210 Sum_probs=35.5
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEecc
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~ 54 (374)
...+.++++.+++.+ ..||+++.... .+..+|++.|++.+.+.+.
T Consensus 238 ~~~l~~l~~~ik~~~----v~~If~e~~~~~~~~~~la~e~g~~v~~ldpl 284 (311)
T PRK09545 238 AQRLHEIRTQLVEQK----ATCVFAEPQFRPAVIESVAKGTSVRMGTLDPL 284 (311)
T ss_pred HHHHHHHHHHHHHcC----CCEEEecCCCChHHHHHHHHhcCCeEEEeccc
Confidence 456778888888766 99999999875 6678999999998775433
No 257
>PRK11617 endonuclease V; Provisional
Probab=24.04 E-value=37 Score=29.88 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=24.3
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCch---hHHHHHHHHh----CCCeEEE
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTV---GWALEIAEQM----GIARAAV 51 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~---~~~~~~A~~l----giP~v~~ 51 (374)
|.+.++++++. .+||+|++|..- +=...+|-++ ++|+|..
T Consensus 85 P~~l~al~~l~-----~~PdlllvDG~G~~HPR~~GlA~HlGv~~~~PtIGV 131 (224)
T PRK11617 85 PALLAAWEQLS-----QKPDLVFVDGHGIAHPRRLGVASHFGLLVDVPTIGV 131 (224)
T ss_pred HHHHHHHHhcC-----cCCCEEEEcCceeECCCCcceeeEEEeecCCCEEEE
Confidence 45556666665 459999999974 2333444444 4565553
No 258
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=23.96 E-value=1.2e+02 Score=28.92 Aligned_cols=29 Identities=17% Similarity=-0.097 Sum_probs=22.2
Q ss_pred cccEEEeCC--ch-hHHHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDV--TV-GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~--~~-~~~~~~A~~lgiP~v~~~ 52 (374)
+||+||+-. +. .++..+|..+|||++-+-
T Consensus 93 ~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hve 124 (365)
T TIGR03568 93 KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIH 124 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEE
Confidence 399998866 33 377888999999999543
No 259
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=23.95 E-value=2.2e+02 Score=27.99 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=49.2
Q ss_pred HHhhC-CCCCCcEEeccCc--------------hhHHHHhhcCcccccccchhh-----hhhhHHHHHhHhcce-eEeec
Q 017266 255 EKVLG-HPSVACFLSHCGW--------------NSSIEGLSMGVPFLCWPYFVD-----QYQNRNYICDAWKVG-SQFFP 313 (374)
Q Consensus 255 ~~lL~-~~~~~~~I~HgG~--------------~s~~eal~~GvP~l~~P~~~D-----Q~~na~~v~~~~g~G-~~l~~ 313 (374)
..++. |++++++||-.|. ..+.|.-..|+|.+++=-..| ...-+..+.++.++- +.++-
T Consensus 138 ~kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c 217 (492)
T TIGR02836 138 RKVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDV 217 (492)
T ss_pred HHHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEH
Confidence 34666 9999999995552 245566778999988743333 222233444444654 34455
Q ss_pred CCCCCcCHHHHHHHHHHHh
Q 017266 314 DENGIITRQEIYNRVKALL 332 (374)
Q Consensus 314 ~~~~~~~~~~l~~~i~~~l 332 (374)
.+ ++.+++.+.++++|
T Consensus 218 ~~---l~~~DI~~il~~vL 233 (492)
T TIGR02836 218 ES---MRESDILSVLEEVL 233 (492)
T ss_pred HH---cCHHHHHHHHHHHH
Confidence 55 89999999999988
No 260
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=23.84 E-value=1.2e+02 Score=27.55 Aligned_cols=38 Identities=8% Similarity=0.212 Sum_probs=23.9
Q ss_pred eEEEeecccccC-CHHHHHHHHHHHhc--CCCCEEEEEcCC
Q 017266 188 VIYVAFGSAAVL-SQQQLEELALGLES--LHQPFLWVVRPD 225 (374)
Q Consensus 188 vv~vs~GS~~~~-~~~~~~~~~~~l~~--~~~~viw~~~~~ 225 (374)
+++|||||...- ....+..+.+.+++ .++.|-|++.+.
T Consensus 3 IllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 3 ILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 799999998543 44467777777765 578889998754
No 261
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=23.46 E-value=1.6e+02 Score=25.19 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=22.8
Q ss_pred cccEEEeCCc--hhHHHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDVT--VGWALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~~--~~~~~~~A~~lgiP~v~~~ 52 (374)
++|+|+.=.. .+.|..+|..+|+|++..-
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vR 80 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAK 80 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 4899986433 4588899999999998864
No 262
>PRK10481 hypothetical protein; Provisional
Probab=23.31 E-value=1.5e+02 Score=26.16 Aligned_cols=40 Identities=5% Similarity=-0.021 Sum_probs=29.8
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhH---HHHHHHHhCCCeEEE
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGW---ALEIAEQMGIARAAV 51 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~---~~~~A~~lgiP~v~~ 51 (374)
.+.+..+++...+ .|+|+.|...+. ...+.+.+|+|+|.-
T Consensus 170 ~l~~aa~~L~~~g----aD~Ivl~C~G~~~~~~~~le~~lg~PVI~~ 212 (224)
T PRK10481 170 ELIDAGKELLDQG----ADVIVLDCLGYHQRHRDLLQKALDVPVLLS 212 (224)
T ss_pred HHHHHHHHhhcCC----CCEEEEeCCCcCHHHHHHHHHHHCcCEEcH
Confidence 4566666776655 999999998653 335788999999873
No 263
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=23.11 E-value=3.6e+02 Score=20.91 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=27.9
Q ss_pred chhhhhcCCCCceEEEeecccccC-CHHHHHHHHHHHhcCCCCEEE
Q 017266 176 CLSWLDKQAIGSVIYVAFGSAAVL-SQQQLEELALGLESLHQPFLW 220 (374)
Q Consensus 176 ~~~~l~~~~~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~viw 220 (374)
..+|+...+ ++++.|-.... +.+.+..+++.|.+.+..-+.
T Consensus 36 ~~~~l~~gE----lvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~ 77 (123)
T PF07905_consen 36 PSDWLRGGE----LVLTTGYALRDDDEEELREFIRELAEKGAAGLG 77 (123)
T ss_pred HHHhCCCCe----EEEECCcccCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 457876543 66676766444 566788899999888765443
No 264
>PRK00784 cobyric acid synthase; Provisional
Probab=22.62 E-value=1.4e+02 Score=29.74 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=25.1
Q ss_pred CcccEEEeCCc-----hh------HHHHHHHHhCCCeEEEecc
Q 017266 23 EQISCVITDVT-----VG------WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 23 ~~~D~iI~D~~-----~~------~~~~~A~~lgiP~v~~~~~ 54 (374)
.+.|++|+|.. .+ ...++|+.+|.|+|.+...
T Consensus 124 ~~~D~vIVEGaGg~~~~~L~~~~~~~~dlak~l~~PVILV~~~ 166 (488)
T PRK00784 124 AEYDVVVVEGAGSPAEINLRDRDIANMGFAEAADAPVILVADI 166 (488)
T ss_pred hcCCEEEEECCCCccccCcccCCchhHHHHHHcCCCEEEEEeC
Confidence 34899999965 22 2678999999999998764
No 265
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=22.60 E-value=1.2e+02 Score=29.61 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=25.5
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEE
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAV 51 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~ 51 (374)
+.+.++.+++ .+||++|... -+..+|+++|||++.+
T Consensus 344 l~~~~~~l~~----~~pDllig~s---~~~~~A~k~gIP~vr~ 379 (422)
T TIGR02015 344 LEDDMEAVLE----FEPDLAIGTT---PLVQFAKEHGIPALYF 379 (422)
T ss_pred HHHHHHHHhh----CCCCEEEcCC---cchHHHHHcCCCEEEe
Confidence 3334445543 3599999884 3566899999999985
No 266
>PLN02775 Probable dihydrodipicolinate reductase
Probab=22.57 E-value=1.5e+02 Score=27.16 Aligned_cols=45 Identities=16% Similarity=0.065 Sum_probs=32.8
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchh-HHH---HHHHHhCCCeEEEeccc
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVG-WAL---EIAEQMGIARAAVVTFA 55 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~-~~~---~~A~~lgiP~v~~~~~~ 55 (374)
..+++.|...++.. +|.|++|+..+ +.. ..+-..|+|.|.-+|..
T Consensus 66 ~dl~~~l~~~~~~~----~~~VvIDFT~P~a~~~~~~~~~~~g~~~VvGTTG~ 114 (286)
T PLN02775 66 SEREAVLSSVKAEY----PNLIVVDYTLPDAVNDNAELYCKNGLPFVMGTTGG 114 (286)
T ss_pred ccHHHHHHHhhccC----CCEEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 45677777765544 99999999877 333 35788899999966553
No 267
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=22.44 E-value=1.1e+02 Score=29.87 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=27.5
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEE
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAV 51 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~ 51 (374)
.+.++.+.+++.+ ||+||.+.. ...+|+++|+|++.+
T Consensus 359 d~~el~~~i~~~~----pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 359 DLWDLESLAKEEP----VDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred CHHHHHHHhhccC----CCEEEECch---hHHHHHhcCCCEEEe
Confidence 4555666555434 999999984 478899999999864
No 268
>PF01397 Terpene_synth: Terpene synthase, N-terminal domain; InterPro: IPR001906 Sequences containing this domain belong to the terpene synthase family. It has been suggested that this gene family be designated tps (for terpene synthase). Sequence comparisons reveal similarities between the monoterpene (C10) synthases, sesquiterpene (C15) synthases and the diterpene (C20) synthases. It has been split into six subgroups on the basis of phylogeny, called Tpsa-Tpsf []. Tpsa includes vetispiridiene synthase Q39979 from SWISSPROT, 5-epi- aristolochene synthase, Q40577 from SWISSPROT and (+)-delta-cadinene synthase P93665 from SWISSPROT . Tpsb includes (-)-limonene synthase, Q40322 from SWISSPROT. Tpsc includes copalyl diphosphate synthase (kaurene synthase A), O04408 from SWISSPROT. Tpsd includes taxadiene synthase, Q41594 from SWISSPROT, pinene synthase, O24475 from SWISSPROT and myrcene synthase, O24474 from SWISSPROT. Tpse includes ent-kaurene synthase B Q39548 from SWISSPROT. Tpsf includes linalool synthase Q9ZPN5 from SWISSPROT. In the fungus Phaeosphaeria sp. (strain L487) the synthesis of ent-kaurene from geranylgeranyl dophosphate is promoted by a single bifunctional protein [].; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 2ONH_A 2ONG_B 3P5R_A 3P5P_A 3N0F_A 3N0G_B 3PYB_A 3PYA_A 3G4F_A 3G4D_B ....
Probab=22.40 E-value=2.5e+02 Score=23.82 Aligned_cols=43 Identities=23% Similarity=0.223 Sum_probs=31.4
Q ss_pred hcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcCC
Q 017266 332 LNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIGC 374 (374)
Q Consensus 332 l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~ 374 (374)
..++.+.+++.++++.++..........-.--++|+.|...||
T Consensus 19 ~~~~~~~~~~~~Lk~~v~~~l~~~~~d~~~~L~lID~lqRLGi 61 (183)
T PF01397_consen 19 SEDEKCKERAEELKEEVRNMLPASYPDPLEKLELIDTLQRLGI 61 (183)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHcCC
Confidence 3467788899999998888876655434455578888888775
No 269
>PRK06932 glycerate dehydrogenase; Provisional
Probab=22.23 E-value=4.5e+02 Score=24.42 Aligned_cols=100 Identities=13% Similarity=0.176 Sum_probs=60.9
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCc
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVAC 265 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~ 265 (374)
+.+-.|.+|++. +++++.++..|.+|+. +... . ... ....+.+..++|+.+++
T Consensus 148 ktvgIiG~G~IG-------~~va~~l~~fg~~V~~-~~~~-------~-~~~---------~~~~~~~l~ell~~sDi-- 200 (314)
T PRK06932 148 STLGVFGKGCLG-------TEVGRLAQALGMKVLY-AEHK-------G-ASV---------CREGYTPFEEVLKQADI-- 200 (314)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEE-ECCC-------c-ccc---------cccccCCHHHHHHhCCE--
Confidence 347788888875 3445555556777654 2211 0 000 01235567789999998
Q ss_pred EEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhc-ceeEeecCCCCCcCHHHHHHHHH
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWK-VGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
++.|+-.+.- .....|++.++. ++ -++.++..+.+.++.+.|.++++
T Consensus 201 v~l~~Plt~~----------------T~~li~~~~l~~-mk~ga~lIN~aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 201 VTLHCPLTET----------------TQNLINAETLAL-MKPTAFLINTGRGPLVDEQALLDALE 248 (314)
T ss_pred EEEcCCCChH----------------HhcccCHHHHHh-CCCCeEEEECCCccccCHHHHHHHHH
Confidence 8888765422 234567777777 35 44566666556677887877776
No 270
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=21.88 E-value=2e+02 Score=21.08 Aligned_cols=44 Identities=23% Similarity=0.215 Sum_probs=26.5
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
..++++.+.+.. ||+||.|...+ -+..+++.+ ++|++.++...-
T Consensus 32 ~~~~~~~~~~~~----~d~iiid~~~~~~~~~~~~~~i~~~~~~~~ii~~t~~~~ 82 (112)
T PF00072_consen 32 GEEALELLKKHP----PDLIIIDLELPDGDGLELLEQIRQINPSIPIIVVTDEDD 82 (112)
T ss_dssp HHHHHHHHHHST----ESEEEEESSSSSSBHHHHHHHHHHHTTTSEEEEEESSTS
T ss_pred HHHHHHHhcccC----ceEEEEEeeeccccccccccccccccccccEEEecCCCC
Confidence 344555555433 99999997643 344443332 688888775543
No 271
>PF12363 DUF3647: Phage protein ; InterPro: IPR024410 Proteins in this entry are frequently annotated as phage proteins, however there is little accompanying literature to back this up or to describe the nature of these phage proteins.
Probab=21.78 E-value=3.4e+02 Score=20.92 Aligned_cols=51 Identities=14% Similarity=0.182 Sum_probs=32.9
Q ss_pred hHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH-HHHHHHHHHHHHHH
Q 017266 297 NRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG-IKANALKMKEMARK 350 (374)
Q Consensus 297 na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~a~~l~~~~~~ 350 (374)
|...+++.+-++..-...+ .|.++|.+.|.++.+++. +.+=...+-+.+.+
T Consensus 49 d~~al~d~i~~a~~~~~~~---~s~~eIe~~ie~~~e~~~~~~~l~~~vl~el~~ 100 (113)
T PF12363_consen 49 DPVALADIIYAATAHEKKR---PSREEIEDYIEDIIEDEDDIEELFDEVLKELKK 100 (113)
T ss_pred CHHHHHHHHHHHhcccCCC---CCHHHHHHHHHHHHhcchhHHHHHHHHHHHHHh
Confidence 3334455566666655555 799999999999877664 55555555555544
No 272
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=21.63 E-value=2.6e+02 Score=23.28 Aligned_cols=106 Identities=11% Similarity=0.176 Sum_probs=63.6
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCc
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVAC 265 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~ 265 (374)
+.+-.+.+|.+. +++++.++..|.+|+..-+... .. ... .. ....+.+..++++.+++
T Consensus 37 ~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~----~~---~~~----~~--~~~~~~~l~ell~~aDi-- 94 (178)
T PF02826_consen 37 KTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPK----PE---EGA----DE--FGVEYVSLDELLAQADI-- 94 (178)
T ss_dssp SEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCH----HH---HHH----HH--TTEEESSHHHHHHH-SE--
T ss_pred CEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCC----hh---hhc----cc--ccceeeehhhhcchhhh--
Confidence 337777777764 4566666667888776655330 00 001 01 11256678889999998
Q ss_pred EEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcc-eeEeecCCCCCcCHHHHHHHHHH
Q 017266 266 FLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKV-GSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 266 ~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
++.|+-.+. ...+..|++.+.. ++- ++.++..+.+.++.+.|.+++++
T Consensus 95 v~~~~plt~----------------~T~~li~~~~l~~-mk~ga~lvN~aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 95 VSLHLPLTP----------------ETRGLINAEFLAK-MKPGAVLVNVARGELVDEDALLDALES 143 (178)
T ss_dssp EEE-SSSST----------------TTTTSBSHHHHHT-STTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred hhhhhcccc----------------ccceeeeeeeeec-cccceEEEeccchhhhhhhHHHHHHhh
Confidence 888875432 1356678888888 464 46677666667888888887763
No 273
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=21.60 E-value=2e+02 Score=24.90 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=24.3
Q ss_pred CcccEEEeCCchh---------HHHHHHHHhCCCeEEEeccc
Q 017266 23 EQISCVITDVTVG---------WALEIAEQMGIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~---------~~~~~A~~lgiP~v~~~~~~ 55 (374)
.++|+||+|.... ...++|..++.|.+......
T Consensus 102 ~~~D~viIEg~gg~~~~~~~~~~~adl~~~l~~pvilV~~~~ 143 (222)
T PRK00090 102 QQYDLVLVEGAGGLLVPLTEDLTLADLAKQLQLPVILVVGVK 143 (222)
T ss_pred hhCCEEEEECCCceeccCCCCCcHHHHHHHhCCCEEEEECCC
Confidence 3499999886411 45678999999998876543
No 274
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=21.51 E-value=2e+02 Score=24.94 Aligned_cols=46 Identities=13% Similarity=0.095 Sum_probs=32.1
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEe
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVV 52 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~ 52 (374)
..|+.+++.+++..-.-..-+||+|--.-.+...|+++|||+..+.
T Consensus 11 sn~~al~~~~~~~~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 11 SNFRAIHDACLDGRVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred hhHHHHHHHHHcCCCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 3577888877543311246678888655567889999999998753
No 275
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=21.26 E-value=3.2e+02 Score=26.60 Aligned_cols=45 Identities=22% Similarity=0.398 Sum_probs=32.4
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh----HHHHHHH---HhCCCeEEEeccchhh
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG----WALEIAE---QMGIARAAVVTFAPAY 58 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~----~~~~~A~---~lgiP~v~~~~~~~~~ 58 (374)
+++.++|++++ .|.+|.-..|. |+..+++ +-|||+|...+.....
T Consensus 326 ~eIa~~Lk~dg----VDAvILtstCgtCtrcga~m~keiE~~GIPvV~i~~~~pI~ 377 (431)
T TIGR01917 326 KEFSKELLAAG----VDAVILTSTUGTCTRCGATMVKEIERAGIPVVHICTVTPIA 377 (431)
T ss_pred HHHHHHHHHcC----CCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeechhHH
Confidence 45677888877 99998885543 6666654 4599999987766543
No 276
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.19 E-value=1.4e+02 Score=26.33 Aligned_cols=31 Identities=16% Similarity=0.022 Sum_probs=20.4
Q ss_pred cccEEEeCCchhH---HHHHHHHhCCCeEEEecc
Q 017266 24 QISCVITDVTVGW---ALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 24 ~~D~iI~D~~~~~---~~~~A~~lgiP~v~~~~~ 54 (374)
+||+||....... ...+.+.+|+|++.+...
T Consensus 74 ~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 74 KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 3999998765432 223445589999887643
No 277
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=21.14 E-value=1.3e+02 Score=24.75 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=21.2
Q ss_pred CCcEEeccCc------hhHHHHhhcCccccccc
Q 017266 263 VACFLSHCGW------NSSIEGLSMGVPFLCWP 289 (374)
Q Consensus 263 ~~~~I~HgG~------~s~~eal~~GvP~l~~P 289 (374)
.+++++|.|- +.+.||...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 4457777774 47789999999999995
No 278
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=21.00 E-value=1.4e+02 Score=30.19 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=22.2
Q ss_pred CCCcEEeccCc------hhHHHHhhcCccccccc
Q 017266 262 SVACFLSHCGW------NSSIEGLSMGVPFLCWP 289 (374)
Q Consensus 262 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 289 (374)
..+++++|.|- +++.||-..++|+|++-
T Consensus 76 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 76 KPAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34458888774 47899999999999984
No 279
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=20.95 E-value=2e+02 Score=24.62 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=22.0
Q ss_pred cccEEEeCCc--hhHHHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDVT--VGWALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~~--~~~~~~~A~~lgiP~v~~~ 52 (374)
.+|+|+.=-. .+.+..+|..+|+|++..-
T Consensus 50 ~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vR 80 (191)
T TIGR01744 50 GITKIVTIEASGIAPAIMTGLKLGVPVVFAR 80 (191)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 4899984322 3588889999999999864
No 280
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=20.94 E-value=1.4e+02 Score=30.02 Aligned_cols=26 Identities=12% Similarity=0.199 Sum_probs=21.2
Q ss_pred cccEEEeCCchhHHHHHHHHhCCCeEEEe
Q 017266 24 QISCVITDVTVGWALEIAEQMGIARAAVV 52 (374)
Q Consensus 24 ~~D~iI~D~~~~~~~~~A~~lgiP~v~~~ 52 (374)
+||+||.+. +...+|+++|||++.++
T Consensus 374 ~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 374 EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 399999988 56667899999997754
No 281
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.90 E-value=2.2e+02 Score=25.93 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=36.0
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEecc
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~ 54 (374)
-...+.++++.+++.+ .++|+++.... .+..+|+..|++.+.+.+.
T Consensus 213 s~~~l~~l~~~ik~~~----v~~If~e~~~~~~~~~~ia~~~g~~v~~l~~l 260 (286)
T cd01019 213 GAKRLAKIRKEIKEKG----ATCVFAEPQFHPKIAETLAEGTGAKVGELDPL 260 (286)
T ss_pred CHHHHHHHHHHHHHcC----CcEEEecCCCChHHHHHHHHhcCceEEEeccc
Confidence 3456778888888766 99999999765 7778999999987765443
No 282
>PF10820 DUF2543: Protein of unknown function (DUF2543); InterPro: IPR020251 This entry contains proteins with no known function.
Probab=20.78 E-value=3.1e+02 Score=19.20 Aligned_cols=44 Identities=23% Similarity=0.348 Sum_probs=30.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcC
Q 017266 324 IYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIG 373 (374)
Q Consensus 324 l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 373 (374)
+.-.|.++|+|+++.+.|++ ++.+. .|-...-|+++-.+|.+-|
T Consensus 36 FQlLitRLmnneeIsEeaQ~--EMA~e----Agi~~~rID~IA~fLNqWG 79 (81)
T PF10820_consen 36 FQLLITRLMNNEEISEEAQQ--EMASE----AGIDEQRIDDIANFLNQWG 79 (81)
T ss_pred HHHHHHHHhccHhhhHHHHH--HHHHH----cCCcHHHHHHHHHHHHHhc
Confidence 44567789999998887764 22223 5777777888877776654
No 283
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=20.68 E-value=1.4e+02 Score=27.26 Aligned_cols=45 Identities=16% Similarity=0.288 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchh-----HHHHHHHHhCCCeEEEe
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVG-----WALEIAEQMGIARAAVV 52 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~-----~~~~~A~~lgiP~v~~~ 52 (374)
.|+++++++++-++. ++.=+||.|.|.- =...+|.+.+||+..+.
T Consensus 132 ~p~IKE~vR~~I~~A--~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLL 181 (284)
T PF07894_consen 132 QPHIKEVVRRMIQQA--QKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILL 181 (284)
T ss_pred CCCHHHHHHHHHHHh--cceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEe
Confidence 457888888886655 7799999999952 23456779999987764
No 284
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=20.35 E-value=3.3e+02 Score=26.55 Aligned_cols=46 Identities=24% Similarity=0.419 Sum_probs=32.6
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh----HHHHHHH---HhCCCeEEEeccchhh
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG----WALEIAE---QMGIARAAVVTFAPAY 58 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~----~~~~~A~---~lgiP~v~~~~~~~~~ 58 (374)
-.++.++|++++ +|.+|.-..|. |+..+++ +-|||+|...+..+..
T Consensus 325 g~eIa~~Lk~dg----VDAVILTstCgtC~r~~a~m~keiE~~GiPvv~~~~~~pis 377 (431)
T TIGR01918 325 AKEFVVELKQGG----VDAVILTSTUGTCTRCGATMVKEIERAGIPVVHMCTVIPIA 377 (431)
T ss_pred HHHHHHHHHHcC----CCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeecccHh
Confidence 346677788877 99998885543 5666654 4599999987765543
No 285
>COG2345 Predicted transcriptional regulator [Transcription]
Probab=20.33 E-value=3.3e+02 Score=23.89 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHcC
Q 017266 337 IKANALKMKEMARKSLGEGGSSFRNFESFISQLKAIG 373 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 373 (374)
.++++.++.+..+.++....+..+.++.+++.+...|
T Consensus 109 l~~r~~~~~~~~~~~~~~~~~~ee~~e~Lv~l~~~~g 145 (218)
T COG2345 109 LEKRAQAIGAQYRPAMGGDADLEEKVERLVELLSDLG 145 (218)
T ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhCC
Confidence 6888889999999887765677888888888887765
No 286
>PLN02859 glutamine-tRNA ligase
Probab=20.29 E-value=1.9e+02 Score=30.67 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=31.3
Q ss_pred HHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHh
Q 017266 299 NYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD-------GIKANALKMKEMARKS 351 (374)
Q Consensus 299 ~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~-------~~~~~a~~l~~~~~~~ 351 (374)
..-++ -|+|+.+ |++++.++|.++++.. .|+.|...+-..+|+.
T Consensus 108 ~Fek~-CGVGV~V--------T~EqI~~~V~~~i~~~k~~il~~RY~~n~g~ll~~~r~~ 158 (788)
T PLN02859 108 KFEEA-CGVGVVV--------SPEDIEAAVNEVFEENKEKILEQRYRTNVGDLLGQVRKR 158 (788)
T ss_pred HHHHh-CCCCEEE--------CHHHHHHHHHHHHHhhHHHHHHhcccccHHHHHHHHHhh
Confidence 33344 3888875 8889999999888643 2777777777777764
No 287
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=20.24 E-value=1.6e+02 Score=25.38 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=24.4
Q ss_pred ccEEEeCCch--hHHHHHHHHhCCCeEEEeccch
Q 017266 25 ISCVITDVTV--GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 25 ~D~iI~D~~~--~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
||+||..... .....-....++|++.+.....
T Consensus 61 PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~~ 94 (238)
T PF01497_consen 61 PDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSSP 94 (238)
T ss_dssp -SEEEEETTSSCHHHHHHHHHTTSEEEEESSTTC
T ss_pred CCEEEEeccccchHHHHHHhcccceEEEeecccc
Confidence 9999988877 4566667788999999876653
No 288
>PHA02754 hypothetical protein; Provisional
Probab=20.05 E-value=1.6e+02 Score=19.74 Aligned_cols=24 Identities=8% Similarity=0.267 Sum_probs=17.7
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHh
Q 017266 328 VKALLNDDGIKANALKMKEMARKS 351 (374)
Q Consensus 328 i~~~l~~~~~~~~a~~l~~~~~~~ 351 (374)
|.+++.+.++++..++++..+..+
T Consensus 7 i~k~i~eK~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 7 IPKAIMEKDFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhC
Confidence 344555778999999998887663
No 289
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=20.05 E-value=2.8e+02 Score=28.35 Aligned_cols=28 Identities=11% Similarity=0.170 Sum_probs=22.5
Q ss_pred CCCcEEeccCc------hhHHHHhhcCccccccc
Q 017266 262 SVACFLSHCGW------NSSIEGLSMGVPFLCWP 289 (374)
Q Consensus 262 ~~~~~I~HgG~------~s~~eal~~GvP~l~~P 289 (374)
+.+++++|.|- +++.+|.+.++|+|++-
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888874 58889999999999984
Done!