Query 017266
Match_columns 374
No_of_seqs 228 out of 1772
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 11:40:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017266.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017266hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1E-60 3.4E-65 463.1 27.2 346 5-370 99-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3E-56 1E-60 438.5 30.4 362 3-371 97-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 3.4E-54 1.2E-58 423.0 33.5 354 4-371 92-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 8.4E-55 2.9E-59 424.7 28.9 350 5-371 94-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.5E-52 5.2E-57 409.7 26.2 346 4-370 98-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.6E-35 5.3E-40 286.6 28.9 215 127-372 209-423 (424)
7 1iir_A Glycosyltransferase GTF 100.0 1.4E-33 4.7E-38 272.4 20.4 207 130-371 193-400 (415)
8 1rrv_A Glycosyltransferase GTF 100.0 1.2E-32 4E-37 265.9 22.0 192 130-350 193-385 (416)
9 4amg_A Snogd; transferase, pol 100.0 2.4E-32 8.2E-37 261.8 21.4 158 175-351 226-385 (400)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.3E-30 8E-35 249.3 27.8 208 129-367 203-410 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 7.8E-31 2.7E-35 252.2 23.7 207 129-370 175-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.2E-29 1.1E-33 240.0 28.0 209 129-368 187-396 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.1E-29 7.2E-34 244.9 25.5 294 8-369 132-433 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 4.1E-29 1.4E-33 241.9 26.3 273 23-350 103-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 7.7E-29 2.6E-33 236.4 27.7 259 10-350 97-363 (384)
16 2o6l_A UDP-glucuronosyltransfe 100.0 2.3E-28 8E-33 206.6 15.7 164 171-350 6-170 (170)
17 4fzr_A SSFS6; structural genom 99.9 2.6E-26 8.9E-31 220.0 18.8 160 176-350 217-384 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 7.3E-25 2.5E-29 209.2 23.6 159 176-350 208-372 (391)
19 3oti_A CALG3; calicheamicin, T 99.9 5.1E-25 1.8E-29 211.0 21.7 170 176-369 222-395 (398)
20 3otg_A CALG1; calicheamicin, T 99.9 4.6E-23 1.6E-27 197.9 30.1 161 176-350 231-392 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 9.9E-19 3.4E-23 165.4 19.0 168 184-369 178-354 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 1.5E-15 5.2E-20 132.2 10.2 132 183-331 25-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.5 1.7E-12 5.8E-17 121.9 16.9 146 184-347 181-336 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.3 7.9E-11 2.7E-15 106.5 18.2 115 186-313 157-274 (282)
25 3dzc_A UDP-N-acetylglucosamine 98.7 2.7E-08 9.1E-13 94.7 9.7 138 185-343 229-376 (396)
26 3ot5_A UDP-N-acetylglucosamine 98.7 8.7E-08 3E-12 91.4 13.0 139 184-343 222-370 (403)
27 4hwg_A UDP-N-acetylglucosamine 98.5 2.5E-07 8.7E-12 87.5 8.4 135 186-337 203-345 (385)
28 3okp_A GDP-mannose-dependent a 98.4 1.5E-05 5.1E-10 74.8 19.3 85 243-340 252-350 (394)
29 2f9f_A First mannosyl transfer 98.4 6.4E-07 2.2E-11 75.0 8.0 139 189-346 25-175 (177)
30 3beo_A UDP-N-acetylglucosamine 98.4 1.2E-06 4E-11 82.0 10.6 84 244-341 263-349 (375)
31 3c48_A Predicted glycosyltrans 98.3 9E-05 3.1E-09 70.6 21.7 84 243-338 305-395 (438)
32 1vgv_A UDP-N-acetylglucosamine 98.3 5E-07 1.7E-11 85.0 5.3 135 185-340 204-348 (384)
33 1v4v_A UDP-N-acetylglucosamine 98.2 8.2E-07 2.8E-11 83.3 4.8 136 186-343 198-343 (376)
34 2jjm_A Glycosyl transferase, g 98.2 0.00018 6.2E-09 67.6 20.3 84 244-339 267-355 (394)
35 2gek_A Phosphatidylinositol ma 98.1 0.00024 8.1E-09 66.8 18.4 86 243-340 262-355 (406)
36 3fro_A GLGA glycogen synthase; 98.0 0.00024 8.1E-09 67.4 17.1 133 188-336 252-398 (439)
37 2r60_A Glycosyl transferase, g 97.8 0.0025 8.5E-08 61.8 21.5 85 243-339 334-429 (499)
38 2iw1_A Lipopolysaccharide core 97.7 0.00025 8.7E-09 65.8 12.3 133 188-341 197-344 (374)
39 4gyw_A UDP-N-acetylglucosamine 97.7 0.00043 1.5E-08 70.7 14.7 142 185-340 521-674 (723)
40 2vsy_A XCC0866; transferase, g 97.7 0.0019 6.4E-08 63.8 18.0 90 244-342 434-530 (568)
41 3qhp_A Type 1 capsular polysac 97.5 0.00033 1.1E-08 57.2 8.4 133 188-340 3-146 (166)
42 3q3e_A HMW1C-like glycosyltran 97.5 0.00094 3.2E-08 66.0 12.9 145 187-342 441-596 (631)
43 2bfw_A GLGA glycogen synthase; 97.3 0.0029 9.8E-08 53.1 12.1 83 245-340 96-187 (200)
44 2iuy_A Avigt4, glycosyltransfe 97.3 0.00047 1.6E-08 63.4 7.6 133 189-345 164-315 (342)
45 3s28_A Sucrose synthase 1; gly 97.3 0.02 7E-07 58.9 20.0 86 243-340 639-740 (816)
46 2x6q_A Trehalose-synthase TRET 97.2 0.0035 1.2E-07 59.1 12.9 84 243-340 292-385 (416)
47 3rhz_A GTF3, nucleotide sugar 97.0 0.00071 2.4E-08 62.5 5.9 110 245-370 215-338 (339)
48 3oy2_A Glycosyltransferase B73 96.9 0.014 4.9E-07 54.7 13.8 83 246-342 256-363 (413)
49 2xci_A KDO-transferase, 3-deox 96.8 0.0023 7.9E-08 59.9 7.5 92 245-347 261-362 (374)
50 1rzu_A Glycogen synthase 1; gl 96.3 0.032 1.1E-06 53.6 12.1 138 188-341 292-450 (485)
51 2qzs_A Glycogen synthase; glyc 96.2 0.034 1.2E-06 53.4 11.9 140 188-342 293-452 (485)
52 2x0d_A WSAF; GT4 family, trans 95.2 0.022 7.6E-07 53.9 5.8 85 243-340 294-385 (413)
53 2hy7_A Glucuronosyltransferase 94.9 0.1 3.5E-06 49.1 9.3 76 243-336 264-354 (406)
54 3vue_A GBSS-I, granule-bound s 93.4 0.37 1.3E-05 47.1 10.2 135 189-333 329-476 (536)
55 3tov_A Glycosyl transferase fa 86.9 0.81 2.8E-05 42.0 5.6 95 185-288 184-286 (349)
56 2gt1_A Lipopolysaccharide hept 84.1 0.66 2.3E-05 41.8 3.5 135 186-336 178-324 (326)
57 1uqt_A Alpha, alpha-trehalose- 83.3 6.4 0.00022 37.7 10.2 106 246-371 333-453 (482)
58 3nb0_A Glycogen [starch] synth 79.8 11 0.00039 37.6 10.7 45 244-290 490-550 (725)
59 1psw_A ADP-heptose LPS heptosy 79.5 1.5 5.3E-05 39.6 4.2 96 185-288 179-286 (348)
60 2iz6_A Molybdenum cofactor car 78.8 13 0.00044 30.3 9.1 133 175-332 36-172 (176)
61 3t5t_A Putative glycosyltransf 77.0 10 0.00036 36.3 9.3 108 245-371 353-472 (496)
62 3to5_A CHEY homolog; alpha(5)b 68.4 6.7 0.00023 30.3 4.8 33 24-56 57-98 (134)
63 2lpm_A Two-component response 66.0 4.1 0.00014 31.0 3.0 39 10-52 43-86 (123)
64 3gl9_A Response regulator; bet 61.5 13 0.00043 27.3 5.1 43 10-56 36-87 (122)
65 2q5c_A NTRC family transcripti 58.6 8.7 0.0003 31.8 3.9 44 7-57 129-172 (196)
66 2pju_A Propionate catabolism o 58.3 13 0.00044 31.6 5.0 29 261-292 64-92 (225)
67 3goc_A Endonuclease V; alpha-b 55.0 12 0.00041 31.9 4.2 41 7-52 95-142 (237)
68 3t6k_A Response regulator rece 52.7 21 0.0007 26.7 5.0 42 10-55 38-88 (136)
69 2vqe_B 30S ribosomal protein S 52.3 8.9 0.0003 33.3 3.0 34 23-56 157-192 (256)
70 3f6p_A Transcriptional regulat 51.2 26 0.00088 25.4 5.3 43 10-56 36-84 (120)
71 2q5c_A NTRC family transcripti 51.1 9 0.00031 31.8 2.8 31 261-292 50-80 (196)
72 3ga2_A Endonuclease V; alpha-b 49.2 16 0.00054 31.4 4.0 41 7-52 97-144 (246)
73 3m6m_D Sensory/regulatory prot 48.6 20 0.00068 27.2 4.4 42 10-55 48-100 (143)
74 2pju_A Propionate catabolism o 48.4 18 0.0006 30.7 4.3 41 6-53 140-180 (225)
75 4b4k_A N5-carboxyaminoimidazol 48.1 1.1E+02 0.0037 24.8 11.6 146 186-354 22-176 (181)
76 2w36_A Endonuclease V; hypoxan 48.1 14 0.00049 31.2 3.6 30 23-52 102-138 (225)
77 3tl4_X Glutaminyl-tRNA synthet 44.7 34 0.0011 28.1 5.2 60 300-369 107-177 (187)
78 1o4v_A Phosphoribosylaminoimid 43.0 1.3E+02 0.0045 24.3 10.1 142 187-354 14-165 (183)
79 1dbw_A Transcriptional regulat 41.4 42 0.0014 24.3 5.2 42 10-55 37-85 (126)
80 3c3m_A Response regulator rece 41.3 39 0.0013 25.1 5.0 32 24-55 47-87 (138)
81 1tmy_A CHEY protein, TMY; chem 39.8 44 0.0015 23.8 5.0 43 10-56 37-86 (120)
82 3a10_A Response regulator; pho 38.9 58 0.002 23.0 5.5 41 10-54 35-82 (116)
83 2a9o_A Response regulator; ess 38.8 50 0.0017 23.4 5.1 32 25-56 46-83 (120)
84 3s2u_A UDP-N-acetylglucosamine 38.7 36 0.0012 30.9 5.1 26 260-287 92-120 (365)
85 4e5s_A MCCFLIKE protein (BA_56 38.4 35 0.0012 30.8 4.8 74 198-290 61-136 (331)
86 3b2n_A Uncharacterized protein 37.9 44 0.0015 24.6 4.8 43 10-56 39-88 (133)
87 3nhm_A Response regulator; pro 37.6 62 0.0021 23.5 5.6 41 10-54 37-86 (133)
88 3gt7_A Sensor protein; structu 37.6 42 0.0014 25.6 4.7 42 10-55 41-91 (154)
89 2qxy_A Response regulator; reg 37.3 53 0.0018 24.3 5.3 41 10-55 38-85 (142)
90 3qjg_A Epidermin biosynthesis 36.6 1.1E+02 0.0036 24.7 7.0 111 188-307 8-141 (175)
91 1srr_A SPO0F, sporulation resp 36.2 46 0.0016 23.9 4.6 31 25-55 48-85 (124)
92 2qzj_A Two-component response 35.9 52 0.0018 24.3 4.9 42 10-55 38-85 (136)
93 3eod_A Protein HNR; response r 35.9 51 0.0018 23.9 4.9 43 10-56 41-90 (130)
94 3rg8_A Phosphoribosylaminoimid 35.7 1.6E+02 0.0056 23.2 7.8 138 188-351 4-149 (159)
95 3grc_A Sensor protein, kinase; 35.4 54 0.0018 24.2 5.0 41 10-54 40-89 (140)
96 2a33_A Hypothetical protein; s 34.9 80 0.0028 26.4 6.2 44 247-290 94-147 (215)
97 2l82_A Designed protein OR32; 34.9 77 0.0026 23.1 5.2 34 188-225 3-36 (162)
98 4e7p_A Response regulator; DNA 34.8 55 0.0019 24.6 5.0 44 9-56 55-105 (150)
99 2r25_B Osmosensing histidine p 34.6 68 0.0023 23.5 5.4 32 24-55 52-91 (133)
100 3jte_A Response regulator rece 34.3 56 0.0019 24.2 4.9 33 23-55 48-87 (143)
101 1xmp_A PURE, phosphoribosylami 34.3 1.8E+02 0.0061 23.3 11.9 146 187-355 12-166 (170)
102 3cg0_A Response regulator rece 34.1 57 0.0019 24.0 4.9 43 10-56 44-93 (140)
103 3crn_A Response regulator rece 34.0 63 0.0022 23.6 5.1 42 10-55 37-85 (132)
104 3qxc_A Dethiobiotin synthetase 33.9 47 0.0016 28.3 4.7 46 7-57 119-173 (242)
105 3hv2_A Response regulator/HD d 33.7 49 0.0017 25.0 4.6 43 9-55 47-96 (153)
106 1xhf_A DYE resistance, aerobic 33.7 68 0.0023 22.9 5.2 33 24-56 47-85 (123)
107 2pl1_A Transcriptional regulat 33.5 76 0.0026 22.5 5.4 33 24-56 44-83 (121)
108 3kht_A Response regulator; PSI 33.2 76 0.0026 23.5 5.5 42 10-55 41-91 (144)
109 1zgz_A Torcad operon transcrip 33.0 61 0.0021 23.1 4.8 32 24-55 46-83 (122)
110 2rjn_A Response regulator rece 32.6 53 0.0018 24.8 4.6 42 10-55 41-89 (154)
111 1pq4_A Periplasmic binding pro 32.5 86 0.003 27.4 6.4 48 5-56 222-271 (291)
112 3rqi_A Response regulator prot 32.2 42 0.0014 26.6 4.0 33 23-55 50-89 (184)
113 3cu5_A Two component transcrip 32.1 51 0.0017 24.6 4.3 41 10-54 39-86 (141)
114 3cfy_A Putative LUXO repressor 32.0 64 0.0022 23.9 4.9 42 10-55 38-86 (137)
115 1mb3_A Cell division response 32.0 53 0.0018 23.5 4.3 30 25-54 46-84 (124)
116 1u11_A PURE (N5-carboxyaminoim 31.9 2E+02 0.007 23.2 10.9 146 187-356 22-177 (182)
117 2qr3_A Two-component system re 31.9 71 0.0024 23.4 5.2 42 10-55 37-90 (140)
118 1p3y_1 MRSD protein; flavoprot 31.7 1.2E+02 0.0042 24.7 6.8 136 188-333 11-185 (194)
119 3p9x_A Phosphoribosylglycinami 31.4 65 0.0022 26.9 5.1 48 7-54 14-61 (211)
120 3h1g_A Chemotaxis protein CHEY 31.3 85 0.0029 22.7 5.4 32 24-55 51-91 (129)
121 3dfz_A SIRC, precorrin-2 dehyd 30.9 72 0.0024 26.8 5.3 153 178-351 25-186 (223)
122 1p6q_A CHEY2; chemotaxis, sign 30.8 57 0.002 23.6 4.3 41 10-54 41-90 (129)
123 1ydh_A AT5G11950; structural g 30.5 31 0.0011 29.0 2.9 43 247-290 90-143 (216)
124 3i42_A Response regulator rece 30.5 52 0.0018 23.8 4.0 42 10-55 37-87 (127)
125 1zh2_A KDP operon transcriptio 30.4 67 0.0023 22.7 4.6 32 25-56 46-83 (121)
126 1jbe_A Chemotaxis protein CHEY 30.1 72 0.0024 22.9 4.8 33 23-55 48-89 (128)
127 1eiw_A Hypothetical protein MT 29.9 60 0.0021 24.0 4.1 65 258-333 36-109 (111)
128 3q9s_A DNA-binding response re 29.4 80 0.0027 26.5 5.5 42 10-55 71-118 (249)
129 3cz5_A Two-component response 29.0 96 0.0033 23.2 5.5 43 9-55 40-89 (153)
130 2lnd_A De novo designed protei 28.9 1.1E+02 0.0038 20.9 4.9 48 281-333 50-100 (112)
131 1qkk_A DCTD, C4-dicarboxylate 28.9 1.5E+02 0.0051 22.1 6.7 59 281-345 74-132 (155)
132 2j48_A Two-component sensor ki 28.8 93 0.0032 21.6 5.2 42 10-55 35-85 (119)
133 3eul_A Possible nitrate/nitrit 28.7 69 0.0024 24.1 4.6 43 9-55 50-99 (152)
134 3hzh_A Chemotaxis response reg 28.7 73 0.0025 24.2 4.8 44 10-55 71-121 (157)
135 4h1h_A LMO1638 protein; MCCF-l 28.5 52 0.0018 29.5 4.3 73 199-290 62-136 (327)
136 3lte_A Response regulator; str 28.2 91 0.0031 22.5 5.1 41 10-54 40-88 (132)
137 1v4v_A UDP-N-acetylglucosamine 28.2 81 0.0028 28.1 5.7 28 24-51 91-121 (376)
138 2rdm_A Response regulator rece 28.0 89 0.003 22.5 5.0 32 24-55 50-89 (132)
139 3c97_A Signal transduction his 28.0 96 0.0033 22.8 5.3 31 10-44 44-76 (140)
140 3ip0_A 2-amino-4-hydroxy-6-hyd 27.9 76 0.0026 25.1 4.6 28 188-215 2-29 (158)
141 1yio_A Response regulatory pro 27.7 57 0.002 26.2 4.2 33 23-55 47-86 (208)
142 1zl0_A Hypothetical protein PA 27.7 65 0.0022 28.7 4.7 75 198-291 63-139 (311)
143 3l7i_A Teichoic acid biosynthe 27.6 64 0.0022 32.4 5.2 109 250-369 605-718 (729)
144 3sr3_A Microcin immunity prote 27.3 53 0.0018 29.6 4.1 74 199-291 63-138 (336)
145 1i3c_A Response regulator RCP1 27.1 93 0.0032 23.3 5.1 32 24-55 61-101 (149)
146 1kgs_A DRRD, DNA binding respo 27.1 82 0.0028 25.6 5.1 32 24-55 46-84 (225)
147 2b4a_A BH3024; flavodoxin-like 27.0 69 0.0024 23.5 4.3 28 25-52 61-95 (138)
148 3mm4_A Histidine kinase homolo 26.6 75 0.0026 25.7 4.7 32 24-55 119-161 (206)
149 1meo_A Phosophoribosylglycinam 26.5 90 0.0031 25.9 5.1 46 8-53 13-58 (209)
150 2h31_A Multifunctional protein 26.4 1.7E+02 0.0058 27.2 7.4 139 186-351 265-412 (425)
151 1vi6_A 30S ribosomal protein S 26.4 36 0.0012 28.4 2.6 34 23-56 114-149 (208)
152 2qsb_A UPF0147 protein TA0600; 26.3 1.6E+02 0.0054 20.7 5.4 30 327-356 18-47 (89)
153 1f9y_A HPPK, protein (6-hydrox 26.0 87 0.003 24.8 4.6 28 188-215 2-29 (158)
154 2qx0_A 7,8-dihydro-6-hydroxyme 25.9 1.1E+02 0.0039 24.1 5.3 28 188-215 3-30 (159)
155 1rcu_A Conserved hypothetical 25.7 1.8E+02 0.0063 23.7 6.8 96 174-290 48-150 (195)
156 1ys7_A Transcriptional regulat 25.7 89 0.0031 25.5 5.1 41 10-54 41-88 (233)
157 3bch_A 40S ribosomal protein S 25.6 38 0.0013 29.2 2.6 34 23-56 150-185 (253)
158 3gi1_A LBP, laminin-binding pr 25.4 79 0.0027 27.6 4.8 44 5-52 213-258 (286)
159 2qvg_A Two component response 25.4 96 0.0033 22.8 4.9 33 23-55 58-99 (143)
160 3f6c_A Positive transcription 25.3 55 0.0019 23.8 3.4 32 24-55 46-84 (134)
161 2qv0_A Protein MRKE; structura 25.3 1.1E+02 0.0037 22.5 5.1 31 10-44 45-77 (143)
162 3irs_A Uncharacterized protein 25.2 98 0.0033 26.9 5.4 133 199-347 135-280 (291)
163 3n53_A Response regulator rece 24.9 76 0.0026 23.3 4.1 41 10-54 36-85 (140)
164 3lqk_A Dipicolinate synthase s 24.8 2.3E+02 0.008 23.2 7.3 71 264-335 89-187 (201)
165 1k66_A Phytochrome response re 24.7 1.1E+02 0.0036 22.6 5.0 32 24-55 62-102 (149)
166 3cnb_A DNA-binding response re 24.6 1.1E+02 0.0037 22.3 5.0 42 10-55 44-94 (143)
167 1mvo_A PHOP response regulator 24.6 98 0.0034 22.4 4.7 30 25-54 48-84 (136)
168 3r0j_A Possible two component 24.6 84 0.0029 26.3 4.8 42 10-55 57-105 (250)
169 2zay_A Response regulator rece 24.5 1E+02 0.0035 22.8 4.9 43 10-56 42-93 (147)
170 1t35_A Hypothetical protein YV 24.4 1.1E+02 0.0037 25.0 5.1 102 175-290 24-135 (191)
171 1a04_A Nitrate/nitrite respons 24.3 83 0.0028 25.4 4.6 42 10-55 41-89 (215)
172 4ds3_A Phosphoribosylglycinami 24.2 86 0.0029 26.1 4.5 47 7-53 19-65 (209)
173 2ywr_A Phosphoribosylglycinami 24.2 1.1E+02 0.0038 25.4 5.3 45 7-53 13-59 (216)
174 3kto_A Response regulator rece 24.2 53 0.0018 24.2 3.1 34 23-56 49-91 (136)
175 2qsj_A DNA-binding response re 24.1 69 0.0024 24.1 3.8 42 10-54 39-87 (154)
176 3r8n_B 30S ribosomal protein S 23.7 33 0.0011 28.9 1.8 33 24-56 149-183 (218)
177 3hdg_A Uncharacterized protein 23.7 62 0.0021 23.7 3.4 41 10-54 41-88 (137)
178 3pdi_B Nitrogenase MOFE cofact 23.6 78 0.0027 29.9 4.6 24 25-51 376-399 (458)
179 2oqr_A Sensory transduction pr 23.5 86 0.0029 25.6 4.6 32 25-56 49-86 (230)
180 3j20_B 30S ribosomal protein S 23.5 42 0.0014 27.9 2.4 34 23-56 110-145 (202)
181 2etv_A Iron(III) ABC transport 23.3 74 0.0025 28.5 4.3 29 25-53 97-126 (346)
182 3sbx_A Putative uncharacterize 23.3 1.5E+02 0.0051 24.2 5.7 42 247-289 93-145 (189)
183 1k68_A Phytochrome response re 23.1 1.2E+02 0.0042 21.8 5.1 33 24-56 55-96 (140)
184 3h5i_A Response regulator/sens 23.1 1.2E+02 0.0041 22.2 5.0 42 10-54 39-87 (140)
185 3heb_A Response regulator rece 23.0 1.3E+02 0.0046 22.3 5.3 34 23-56 58-100 (152)
186 3tqr_A Phosphoribosylglycinami 22.8 1.1E+02 0.0038 25.5 5.0 46 7-53 17-62 (215)
187 2ywx_A Phosphoribosylaminoimid 22.7 2.8E+02 0.0096 21.8 9.9 135 189-351 2-144 (157)
188 2zkq_b 40S ribosomal protein S 22.7 45 0.0015 29.4 2.6 35 23-57 117-153 (295)
189 2wqk_A 5'-nucleotidase SURE; S 22.6 73 0.0025 27.3 3.9 31 23-53 84-127 (251)
190 1g63_A Epidermin modifying enz 22.3 3E+02 0.01 22.0 9.9 110 188-308 5-139 (181)
191 3bbn_B Ribosomal protein S2; s 22.2 29 0.00099 29.5 1.2 33 24-56 157-191 (231)
192 3c3w_A Two component transcrip 22.1 63 0.0022 26.5 3.4 41 10-54 37-84 (225)
193 2i2c_A Probable inorganic poly 22.1 31 0.001 30.0 1.4 28 261-290 36-69 (272)
194 1cbk_A Protein (7,8-dihydro-6- 22.0 1.1E+02 0.0038 24.2 4.5 28 188-215 3-30 (160)
195 3qbc_A 2-amino-4-hydroxy-6-hyd 22.0 1.1E+02 0.0037 24.3 4.4 28 188-215 6-33 (161)
196 4dad_A Putative pilus assembly 21.9 85 0.0029 23.3 3.9 32 24-55 67-105 (146)
197 3fet_A Electron transfer flavo 21.8 1.7E+02 0.0059 23.1 5.8 43 7-54 57-102 (166)
198 3av3_A Phosphoribosylglycinami 21.8 1.1E+02 0.0039 25.3 4.8 47 7-53 15-61 (212)
199 2q37_A OHCU decarboxylase; 2-O 21.8 2.1E+02 0.007 23.2 6.2 53 294-350 117-172 (181)
200 3cg4_A Response regulator rece 21.7 1E+02 0.0035 22.6 4.3 40 10-53 41-89 (142)
201 3n0r_A Response regulator; sig 21.6 1.1E+02 0.0037 26.6 4.9 41 10-54 195-242 (286)
202 1q1v_A DEK protein; winged-hel 21.6 1.9E+02 0.0064 19.3 5.0 53 318-370 11-66 (70)
203 1jkx_A GART;, phosphoribosylgl 21.3 1.3E+02 0.0046 24.9 5.2 47 7-53 12-58 (212)
204 2gwr_A DNA-binding response re 21.3 74 0.0025 26.3 3.7 31 24-54 49-85 (238)
205 4hn9_A Iron complex transport 21.1 96 0.0033 27.5 4.6 29 25-53 117-145 (335)
206 2qzg_A Conserved uncharacteriz 21.1 1.7E+02 0.0058 20.8 4.8 30 327-356 22-51 (94)
207 3t8y_A CHEB, chemotaxis respon 21.0 1.3E+02 0.0043 23.0 4.9 43 9-55 60-108 (164)
208 3tla_A MCCF; serine protease, 20.9 78 0.0027 29.0 3.9 74 198-290 92-167 (371)
209 3fgn_A Dethiobiotin synthetase 20.9 1.3E+02 0.0043 25.8 5.1 34 23-56 125-168 (251)
210 2nrr_A Uvrabc system protein C 20.8 2.6E+02 0.0089 22.0 6.4 42 8-51 65-111 (159)
211 1vgv_A UDP-N-acetylglucosamine 20.4 83 0.0028 28.0 4.1 28 25-52 87-117 (384)
212 1u0t_A Inorganic polyphosphate 20.3 40 0.0014 29.9 1.8 32 257-290 72-107 (307)
213 3afo_A NADH kinase POS5; alpha 20.3 48 0.0016 30.6 2.4 36 253-290 107-147 (388)
214 3hh8_A Metal ABC transporter s 20.3 1.1E+02 0.0039 26.7 4.8 41 5-49 217-259 (294)
215 3o7i_A OHCU decarboxylase; lya 20.2 2.4E+02 0.0082 22.9 6.3 53 294-350 126-181 (189)
216 1yt5_A Inorganic polyphosphate 20.1 36 0.0012 29.3 1.4 28 260-289 41-71 (258)
217 2o8i_A AGR_C_4230P, hypothetic 20.1 2.5E+02 0.0086 22.2 6.3 53 294-350 101-156 (165)
218 3ors_A N5-carboxyaminoimidazol 20.0 3.3E+02 0.011 21.6 8.5 142 188-352 5-155 (163)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1e-60 Score=463.07 Aligned_cols=346 Identities=27% Similarity=0.438 Sum_probs=289.7
Q ss_pred chHHHHHHHHHhHhc-CCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhc-cccCCCCCCCC
Q 017266 5 MPGCLKNFIEQVKES-NDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDA-GILDSTGNATS 82 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~-~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~ 82 (374)
+.+.+++.++++.++ + +++||||+|.+++|+.++|++||||++.|++++++.+..+++.+.+... +... ...
T Consensus 99 ~~~~~~~~l~~~~~~~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~----~~~ 172 (454)
T 3hbf_A 99 MQENFKHVIDEAVAETG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE----VHD 172 (454)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHH----HTT
T ss_pred HHHHHHHHHHHHHhhcC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCc----ccc
Confidence 445677777775332 3 5799999999999999999999999999999999998888877665432 1100 011
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcch----hccCCCEEeecccCC
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPA----CDLVPNILTIGPLLG 158 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~~~~vGpl~~ 158 (374)
+..+.++||+++++.++++. ++.. .......+...+..+.+.+++++|+||+++||+++ ++..+++++|||++.
T Consensus 173 ~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~~ 250 (454)
T 3hbf_A 173 VKSIDVLPGFPELKASDLPE-GVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNL 250 (454)
T ss_dssp SSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHHH
T ss_pred ccccccCCCCCCcChhhCch-hhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCccc
Confidence 22344589999999999994 3332 22334556666777778899999999999999863 456689999999986
Q ss_pred CCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchh
Q 017266 159 SDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGF 238 (374)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~ 238 (374)
..... .++.+.+|.+||+.++++++|||+|||....+.+++.+++.+|++.+++|||+++.. ....+|+++
T Consensus 251 ~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~~lp~~~ 321 (454)
T 3hbf_A 251 TTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKEKLPKGF 321 (454)
T ss_dssp HSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHHHSCTTH
T ss_pred ccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chhcCCHhH
Confidence 32111 012466799999999888999999999988889999999999999999999999875 234578888
Q ss_pred hhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 239 VERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 239 ~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.+....
T Consensus 322 ~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~--- 398 (454)
T 3hbf_A 322 LERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGV--- 398 (454)
T ss_dssp HHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGS---
T ss_pred HhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCC---
Confidence 88889999999999999999999999999999999999999999999999999999999999998669999998765
Q ss_pred cCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 319 ITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+++++|.++|+++|+++ +||+||+++++.+++++++||||.+++++||+++.
T Consensus 399 ~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 399 LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999999999999987 69999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3e-56 Score=438.54 Aligned_cols=362 Identities=29% Similarity=0.629 Sum_probs=280.7
Q ss_pred ccchHHHHHHHHHhHhc--CCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCC-
Q 017266 3 AVMPGCLKNFIEQVKES--NDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGN- 79 (374)
Q Consensus 3 ~~~~~~l~~ll~~l~~~--~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~- 79 (374)
+.+.+.+++++++++++ + .+|||||+|.+++|+..+|+++|||++.+++++++....+.+++.+...+..+....
T Consensus 97 ~~~~~~l~~ll~~l~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 174 (482)
T 2pq6_A 97 KNFLKPYCELLTRLNHSTNV--PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDES 174 (482)
T ss_dssp TSSHHHHHHHHHHHHTCSSS--CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCSSGG
T ss_pred HHhhHHHHHHHHHHhhhccC--CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCcccc
Confidence 46788999999998743 2 469999999999999999999999999999999887666655555444344331100
Q ss_pred -CCC---cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcch----hccCCCEE
Q 017266 80 -ATS---DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPA----CDLVPNIL 151 (374)
Q Consensus 80 -~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~~~ 151 (374)
... ......+|+++.++..+++ .+.......+...+.+....+...+++++|+||+++||++. ++..++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~~~v~ 253 (482)
T 2pq6_A 175 YLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIY 253 (482)
T ss_dssp GGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTCTTEE
T ss_pred ccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhCCcEE
Confidence 000 1122245677666666665 33332222233444444556667789999999999999863 44458999
Q ss_pred eecccCCC-CCCC------CccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcC
Q 017266 152 TIGPLLGS-DHSE------HSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRP 224 (374)
Q Consensus 152 ~vGpl~~~-~~~~------~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~ 224 (374)
+|||++.. +... ......|+.+.+|.+||+.++++++|||||||....+.+.+.+++.+|++.+++|||+++.
T Consensus 254 ~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 333 (482)
T 2pq6_A 254 PIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRP 333 (482)
T ss_dssp ECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 99999862 1110 0001234456679999999888889999999998778888999999999999999999985
Q ss_pred CCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhH
Q 017266 225 DFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDA 304 (374)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 304 (374)
....+....+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.
T Consensus 334 ~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~ 413 (482)
T 2pq6_A 334 DLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE 413 (482)
T ss_dssp GGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT
T ss_pred CccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH
Confidence 42111112377888778889999999999999999999999999999999999999999999999999999999999733
Q ss_pred hcceeEeecCCCCCcCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 305 WKVGSQFFPDENGIITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 305 ~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
+|+|+.+. .+ ++.++|.++|+++|+|+ +||+||+++++.+++++.+||||.+++++||+++..
T Consensus 414 ~G~g~~l~-~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 414 WEIGMEID-TN---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp SCCEEECC-SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred hCEEEEEC-CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 69999997 44 89999999999999998 599999999999999999999999999999998754
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.4e-54 Score=423.04 Aligned_cols=354 Identities=30% Similarity=0.533 Sum_probs=274.6
Q ss_pred cchHHHHHHHHHhHhcCCCCcc-cEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCC
Q 017266 4 VMPGCLKNFIEQVKESNDCEQI-SCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATS 82 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~-D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 82 (374)
.+.+.++++++++.+ . .++ ||||+|.+++|+..+|+++|||++.+++++++....+.++|.....+..+ +...
T Consensus 92 ~~~~~l~~ll~~~~~-~--~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 165 (480)
T 2vch_A 92 RSNPELRKVFDSFVE-G--GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE---FREL 165 (480)
T ss_dssp TTHHHHHHHHHHHHH-T--TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC---GGGC
T ss_pred hhhHHHHHHHHHhcc-C--CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc---cccc
Confidence 456788888888742 2 458 99999999999999999999999999999988777776666443221110 0000
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhc-------cCCCEEeecc
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACD-------LVPNILTIGP 155 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-------~~~~~~~vGp 155 (374)
.. ....|+++++...+++..+. ... ......+......+.+++.+++||+.+||++... ..+++++|||
T Consensus 166 ~~-~~~~Pg~~p~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGp 241 (480)
T 2vch_A 166 TE-PLMLPGCVPVAGKDFLDPAQ-DRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGP 241 (480)
T ss_dssp SS-CBCCTTCCCBCGGGSCGGGS-CTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCC
T ss_pred CC-cccCCCCCCCChHHCchhhh-cCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEec
Confidence 11 12457777776666663322 211 1233333444556667889999999999975321 1379999999
Q ss_pred cCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC-------
Q 017266 156 LLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMN------- 228 (374)
Q Consensus 156 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~------- 228 (374)
++...... ..++.+.++.+||+.++++++|||||||....+.+++.+++++|++++++|||+++.....
T Consensus 242 l~~~~~~~----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~ 317 (480)
T 2vch_A 242 LVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFD 317 (480)
T ss_dssp CCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTC
T ss_pred cccccccc----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccc
Confidence 98742110 0113567899999998888899999999988888999999999999999999999865210
Q ss_pred ----cc-ccCCCchhhhhcCCCcEEEe-ecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHH
Q 017266 229 ----RS-HAKLPDGFVERVSDRGKFVE-WAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYIC 302 (374)
Q Consensus 229 ----~~-~~~~~~~~~~~~~~~~~~~~-~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 302 (374)
.. ...+|+++.+++.++++++. |+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||++++
T Consensus 318 ~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~ 397 (480)
T 2vch_A 318 SHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS 397 (480)
T ss_dssp C--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred cccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHH
Confidence 11 13578888888888888885 9999999999999999999999999999999999999999999999999974
Q ss_pred hHhcceeEeecCCCCCcCHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 303 DAWKVGSQFFPDENGIITRQEIYNRVKALLN---DDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 303 ~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
+.+|+|+.+...+++.++.++|+++|+++|+ +++||+||+++++.+++++.+||+|.+++++||+++.+
T Consensus 398 ~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 398 EDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 3379999997653345999999999999998 66799999999999999999999999999999998865
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=8.4e-55 Score=424.73 Aligned_cols=350 Identities=26% Similarity=0.489 Sum_probs=273.3
Q ss_pred chHHHHHHHHHhHhc-CCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhc-cccCCCCCCCC
Q 017266 5 MPGCLKNFIEQVKES-NDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDA-GILDSTGNATS 82 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~-~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~ 82 (374)
+.+.++++++++.++ + .+|||||+|.+++|+..+|+++|||++.+++++++....+.+.+.+... +..+. ....
T Consensus 94 ~~~~~~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 169 (456)
T 2c1x_A 94 APESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI--QGRE 169 (456)
T ss_dssp HHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCC--TTCT
T ss_pred hHHHHHHHHHHHHhccC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCccc--cccc
Confidence 345677777765432 3 5699999999999999999999999999999988776655444433221 21110 0111
Q ss_pred cccccccccCCCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcch----hccCCCEEeecccCC
Q 017266 83 DELILLSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPA----CDLVPNILTIGPLLG 158 (374)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~~~~~~vGpl~~ 158 (374)
......+|+++.++..+++. +.........+.+...+..+.+.+++++|+||+++||++. ++..+++++|||++.
T Consensus 170 ~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~~ 248 (456)
T 2c1x_A 170 DELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNL 248 (456)
T ss_dssp TCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHHH
T ss_pred ccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCccc
Confidence 12233568888777777773 2222222222333333444556789999999999999863 445689999999986
Q ss_pred CCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchh
Q 017266 159 SDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGF 238 (374)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~ 238 (374)
...... ++.+.++.+|++.++++++|||+|||....+.+.+.+++++|++.+++|||+++.. ....+|+++
T Consensus 249 ~~~~~~-----~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~~~~l~~~~ 319 (456)
T 2c1x_A 249 ITPPPV-----VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----ARVHLPEGF 319 (456)
T ss_dssp HC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GGGGSCTTH
T ss_pred Cccccc-----ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----chhhCCHHH
Confidence 321110 12345689999998888899999999987788999999999999999999999865 233577777
Q ss_pred hhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 239 VERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 239 ~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.+...+
T Consensus 320 ~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~--- 396 (456)
T 2c1x_A 320 LEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV--- 396 (456)
T ss_dssp HHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS---
T ss_pred HhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCC---
Confidence 77778999999999999999999999999999999999999999999999999999999999999669999997655
Q ss_pred cCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 319 ITRQEIYNRVKALLNDD---GIKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
++.++|.++|+++|+|+ +||+||+++++.+++++++||||.+++++||+++.+
T Consensus 397 ~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 397 FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99999999999999987 799999999999999999999999999999998854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.5e-52 Score=409.73 Aligned_cols=346 Identities=27% Similarity=0.494 Sum_probs=270.5
Q ss_pred cchHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCc
Q 017266 4 VMPGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSD 83 (374)
Q Consensus 4 ~~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 83 (374)
.+.+.++++++++ .+ .+|||||+|.+++|+..+|+++|||++.+++++++....+.++|.+...+. +....
T Consensus 98 ~~~~~~~~ll~~~--~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 168 (463)
T 2acv_A 98 SLIPHVKATIKTI--LS--NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV-----FDDSD 168 (463)
T ss_dssp HTHHHHHHHHHHH--CC--TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC-----CCCSS
T ss_pred hhhHHHHHHHHhc--cC--CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC-----CCCcc
Confidence 4567888888886 22 469999999999999999999999999999999887777666554421110 11111
Q ss_pred c--cccccccC-CCCccccccccCCCCCchhHHHHHHHHHHHHhccCccEEEEcCCccCCcchhcc-------CCCEEee
Q 017266 84 E--LILLSEDT-LPWKKNEYIWSFPSQPDVQKLYFEATSAVAQSLKISNWILCNSFYELDSPACDL-------VPNILTI 153 (374)
Q Consensus 84 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-------~~~~~~v 153 (374)
. ....+|++ +++...+++..+. .+ . ...+.+......+++++.+++||+++||++...+ .+++++|
T Consensus 169 ~~~~~~~~pg~~~~~~~~~l~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~v 244 (463)
T 2acv_A 169 RDHQLLNIPGISNQVPSNVLPDACF-NK--D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAV 244 (463)
T ss_dssp GGGCEECCTTCSSCEEGGGSCHHHH-CT--T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEEC
T ss_pred ccCceeECCCCCCCCChHHCchhhc-CC--c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEe
Confidence 1 02345777 7766666653221 11 1 1333334445556788999999999999864322 5799999
Q ss_pred cccCCCCC-CCCccCCCCCCCccchhhhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccc
Q 017266 154 GPLLGSDH-SEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAA-VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSH 231 (374)
Q Consensus 154 Gpl~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~ 231 (374)
||++.... .... .. |+.+.++.+||+.++++++|||+|||.. ..+.+++.+++++|++.+++|||+++.+ .
T Consensus 245 Gpl~~~~~~~~~~-~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-----~ 317 (463)
T 2acv_A 245 GPLLDLKGQPNPK-LD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-----K 317 (463)
T ss_dssp CCCCCSSCCCBTT-BC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-----G
T ss_pred CCCcccccccccc-cc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-----c
Confidence 99987421 1000 00 1245678999999888899999999998 7888899999999999999999999853 1
Q ss_pred cCCCchhhhhc--CCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHH-HhHhcce
Q 017266 232 AKLPDGFVERV--SDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYI-CDAWKVG 308 (374)
Q Consensus 232 ~~~~~~~~~~~--~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v-~~~~g~G 308 (374)
..+|+++.++. ++++++++|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.||+++ ++ +|+|
T Consensus 318 ~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~-~g~g 396 (463)
T 2acv_A 318 KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE-WGVG 396 (463)
T ss_dssp GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-SCCE
T ss_pred ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH-cCeE
Confidence 23677777676 78999999999999999999999999999999999999999999999999999999996 66 7999
Q ss_pred eEe-ecCCCC--CcCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 309 SQF-FPDENG--IITRQEIYNRVKALLN-DDGIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 309 ~~l-~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+.+ ...+++ .++.++|.++|+++|+ +++||+||+++++.+++++++||+|.+++++||++++
T Consensus 397 ~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 397 LGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp EESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred EEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 999 321112 3899999999999997 4789999999999999999999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-35 Score=286.60 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=174.9
Q ss_pred CccEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHH
Q 017266 127 ISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEE 206 (374)
Q Consensus 127 ~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~ 206 (374)
.++.+|+|+.++|+++..++++++++|||+... .. +..+|++..+++++|||++||......+.+.+
T Consensus 209 ~~~~~l~~~~~~l~~~~~~~~~~~~~vGp~~~~-~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~ 275 (424)
T 2iya_A 209 APNRCIVALPRTFQIKGDTVGDNYTFVGPTYGD-RS------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRT 275 (424)
T ss_dssp CCSSEEESSCTTTSTTGGGCCTTEEECCCCCCC-CG------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHH
T ss_pred CCCcEEEEcchhhCCCccCCCCCEEEeCCCCCC-cc------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHH
Confidence 568899999999998756788899999998642 10 12367665566779999999997667788999
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccc
Q 017266 207 LALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFL 286 (374)
Q Consensus 207 ~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l 286 (374)
+++++++.+.+++|.++..... +.+ ...++|+.+.+|+||.++|+|+++ ||||||+||++|++++|||+|
T Consensus 276 ~~~al~~~~~~~~~~~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i 345 (424)
T 2iya_A 276 CLSAVDGLDWHVVLSVGRFVDP-------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMV 345 (424)
T ss_dssp HHHHHTTCSSEEEEECCTTSCG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHHHhcCCcEEEEEECCcCCh-------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEE
Confidence 9999988889999998864110 111 123678899999999999999998 999999999999999999999
Q ss_pred cccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q 017266 287 CWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFI 366 (374)
Q Consensus 287 ~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v 366 (374)
++|...||..||+++++ +|+|+.+..++ ++.++|.++|+++|+|++|+++++++++.+++ .+++.+..+.+.
T Consensus 346 ~~p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 417 (424)
T 2iya_A 346 AVPQIAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVLAVASDPGVAERLAAVRQEIRE----AGGARAAADILE 417 (424)
T ss_dssp ECCCSHHHHHHHHHHHH-TTSEEECCGGG---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHH
T ss_pred EecCccchHHHHHHHHH-CCCEEEcCcCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHHH
Confidence 99999999999999998 59999998765 89999999999999999999999999999887 344444444444
Q ss_pred HHHHHc
Q 017266 367 SQLKAI 372 (374)
Q Consensus 367 ~~~~~~ 372 (374)
+.+.+.
T Consensus 418 ~~~~~~ 423 (424)
T 2iya_A 418 GILAEA 423 (424)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 444443
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.4e-33 Score=272.36 Aligned_cols=207 Identities=12% Similarity=0.087 Sum_probs=166.3
Q ss_pred EEEEcCCccCCc-chhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHH
Q 017266 130 WILCNSFYELDS-PACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELA 208 (374)
Q Consensus 130 ~~l~ns~~~le~-~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 208 (374)
.+|+|+++.|++ + .+.. ++++|||+... .. ++.+.++.+|++..+ ++|||++||.. ...+.++.++
T Consensus 193 ~~l~~~~~~l~~~~-~~~~-~~~~vG~~~~~-~~-------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 193 HPWVAADPVLAPLQ-PTDL-DAVQTGAWILP-DE-------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp SCEECSCTTTSCCC-CCSS-CCEECCCCCCC-CC-------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred CEEEeeChhhcCCC-cccC-CeEeeCCCccC-cc-------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 789999999997 5 3323 89999999863 21 135677899998653 58999999987 6678888999
Q ss_pred HHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 209 LGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 209 ~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++++.+.+++|+++.... .. ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|+|+|++
T Consensus 260 ~al~~~~~~~v~~~g~~~~-----~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADL-----VL-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HHHHHTTCCEEECTTCTTC-----CC-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHCCCeEEEEeCCCcc-----cc-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 9999999999999885511 11 122467788999999999977777 99999999999999999999999
Q ss_pred cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHH
Q 017266 289 PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQ 368 (374)
Q Consensus 289 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~ 368 (374)
|...||..||+++++ +|+|+.+...+ ++.++|.++|+++ +|++|+++++++++.+++ ....+.+.+.+++
T Consensus 328 p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~ 397 (415)
T 1iir_A 328 PQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDA 397 (415)
T ss_dssp CCSTTHHHHHHHHHH-HTSEEECSSSS---CCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH-CCCcccCCcCC---CCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHH
Confidence 999999999999988 59999998765 8999999999999 999999999999998754 2334555556655
Q ss_pred HHH
Q 017266 369 LKA 371 (374)
Q Consensus 369 ~~~ 371 (374)
+..
T Consensus 398 ~~~ 400 (415)
T 1iir_A 398 VSR 400 (415)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-32 Score=265.88 Aligned_cols=192 Identities=14% Similarity=0.044 Sum_probs=161.5
Q ss_pred EEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeeccccc-CCHHHHHHHH
Q 017266 130 WILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAV-LSQQQLEELA 208 (374)
Q Consensus 130 ~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~-~~~~~~~~~~ 208 (374)
.+++|+++.|+++ .+.. ++++|||+... .. ++.+.++.+|++..+ ++|||++||... ...+.+.+++
T Consensus 193 ~~l~~~~~~l~~~-~~~~-~~~~vG~~~~~-~~-------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~ 260 (416)
T 1rrv_A 193 RPLLAADPVLAPL-QPDV-DAVQTGAWLLS-DE-------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAV 260 (416)
T ss_dssp SCEECSCTTTSCC-CSSC-CCEECCCCCCC-CC-------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHH
T ss_pred CeEEccCccccCC-CCCC-CeeeECCCccC-cc-------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHH
Confidence 7999999999976 3323 89999999873 21 135677899998653 589999999853 4567788899
Q ss_pred HHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 209 LGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 209 ~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++++.+.+++|+++... . .. ...++|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++
T Consensus 261 ~al~~~~~~~v~~~g~~~----~-~~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 261 EAIRAQGRRVILSRGWTE----L-VL-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp HHHHHTTCCEEEECTTTT----C-CC-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHCCCeEEEEeCCcc----c-cc-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEc
Confidence 999999999999988651 1 11 123677899999999999988777 99999999999999999999999
Q ss_pred cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 017266 289 PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 289 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 350 (374)
|...||..||+++++ +|+|+.+...+ ++.++|.++|+++ +|++|+++++++++.+++
T Consensus 329 p~~~dQ~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 329 PRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTV-LAPETRARAEAVAGMVLT 385 (416)
T ss_dssp CCSBTHHHHHHHHHH-HTSEEECSSSC---CCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC
T ss_pred cCCCCcHHHHHHHHH-CCCccCCCCCC---CCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh
Confidence 999999999999999 59999998766 8999999999999 999999999999988765
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.4e-32 Score=261.78 Aligned_cols=158 Identities=23% Similarity=0.322 Sum_probs=130.5
Q ss_pred cchhhhhcCCCCceEEEeecccccCC--HHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeec
Q 017266 175 TCLSWLDKQAIGSVIYVAFGSAAVLS--QQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWA 252 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS~~~~~--~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (374)
.+.+|++..+++++|||+|||..... .+.+.++++++.+.+.+++|..+... .. .. ...++|+++.+|+
T Consensus 226 ~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~----~~-~~----~~~~~~v~~~~~~ 296 (400)
T 4amg_A 226 VLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD----LA-LL----GELPANVRVVEWI 296 (400)
T ss_dssp ECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC----CC-CC----CCCCTTEEEECCC
T ss_pred cCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc----cc-cc----ccCCCCEEEEeec
Confidence 34578888888899999999985433 35678899999999999999987651 11 11 1236778999999
Q ss_pred ChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 253 PQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
||.++|+|+++ ||||||+||++|++++|||+|++|+++||+.||+++++ +|+|+.++..+ ++. ++|+++|
T Consensus 297 p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~~~---~~~----~al~~lL 366 (400)
T 4amg_A 297 PLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEAGS---LGA----EQCRRLL 366 (400)
T ss_dssp CHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCTTT---CSH----HHHHHHH
T ss_pred CHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCCCC---chH----HHHHHHH
Confidence 99999999998 99999999999999999999999999999999999999 59999998766 665 4677899
Q ss_pred cChHHHHHHHHHHHHHHHh
Q 017266 333 NDDGIKANALKMKEMARKS 351 (374)
Q Consensus 333 ~~~~~~~~a~~l~~~~~~~ 351 (374)
+|++||+||+++++.+++.
T Consensus 367 ~d~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 367 DDAGLREAALRVRQEMSEM 385 (400)
T ss_dssp HCHHHHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999884
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.98 E-value=2.3e-30 Score=249.33 Aligned_cols=208 Identities=15% Similarity=0.195 Sum_probs=169.8
Q ss_pred cEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHH
Q 017266 129 NWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELA 208 (374)
Q Consensus 129 ~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 208 (374)
+..++.+.+.++++...++.++.++||+.... .+..+|....+++++|||++||......+.+..++
T Consensus 203 ~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~-------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~ 269 (415)
T 3rsc_A 203 QLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDR-------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCA 269 (415)
T ss_dssp SEEEESSCTTTSTTGGGCCTTEEECCCCCCCC-------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHH
T ss_pred CeEEEEcCcccCCCcccCCCceEEeCCCCCCc-------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHH
Confidence 78889999999877556778999999987531 11224554455667999999999766778899999
Q ss_pred HHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 209 LGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 209 ~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++.+.+.+++|.++..... +. .+..++|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++
T Consensus 270 ~al~~~~~~~v~~~g~~~~~-------~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 270 RAFDGQPWHVVMTLGGQVDP-------AA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp HHHTTSSCEEEEECTTTSCG-------GG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEEC
T ss_pred HHHhcCCcEEEEEeCCCCCh-------HH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEe
Confidence 99998889999998854111 11 1123577899999999999999999 99999999999999999999999
Q ss_pred cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHH
Q 017266 289 PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFIS 367 (374)
Q Consensus 289 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~ 367 (374)
|...||..||+++++. |+|+.+..++ ++.++|.++|+++++|++++++++++++.+.+ .+++.+..+.+.+
T Consensus 340 p~~~~q~~~a~~l~~~-g~g~~~~~~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQL-GLGAVLPGEK---ADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp CCSGGGHHHHHHHHHH-TCEEECCGGG---CCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHc-CCEEEcccCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 9999999999999995 9999998766 89999999999999999999999999999887 4444444444333
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.97 E-value=7.8e-31 Score=252.21 Aligned_cols=207 Identities=14% Similarity=0.101 Sum_probs=169.1
Q ss_pred cEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHH
Q 017266 129 NWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELA 208 (374)
Q Consensus 129 ~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 208 (374)
+..+++..+.+.+. .+++++++++|+++.. ... +.+.++.+|++.. +++|||++||... ..+.+..++
T Consensus 175 ~~~l~~~~~~l~p~-~~~~~~~~~~G~~~~~-~~~-------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~ 242 (404)
T 3h4t_A 175 DQPWLAADPVLSPL-RPTDLGTVQTGAWILP-DQR-------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAI 242 (404)
T ss_dssp SSCEECSCTTTSCC-CTTCCSCCBCCCCCCC-CCC-------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHH
T ss_pred CCeEEeeCcceeCC-CCCCCCeEEeCccccC-CCC-------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHH
Confidence 34577888899766 5678899999988763 222 3677888998853 4589999999976 677889999
Q ss_pred HHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 209 LGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 209 ~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++.+.++++||+.+... ... . ..++|+++.+|+||.++|.++++ ||||||+||+.|++++|+|+|++
T Consensus 243 ~al~~~~~~vv~~~g~~~----~~~-~-----~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 243 EAVRAQGRRVVLSSGWAG----LGR-I-----DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp HHHHHTTCCEEEECTTTT----CCC-S-----SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHhCCCEEEEEeCCcc----ccc-c-----cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEc
Confidence 999999999999988641 111 1 12578899999999999998888 99999999999999999999999
Q ss_pred cchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHH
Q 017266 289 PYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQ 368 (374)
Q Consensus 289 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~ 368 (374)
|+.+||+.||+++++. |+|+.+...+ ++.++|.++|+++++ ++|+++++++++.+++ ...+.+.+.|.+
T Consensus 311 p~~~dQ~~na~~~~~~-G~g~~l~~~~---~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~------~~~~~~~~~i~~ 379 (404)
T 3h4t_A 311 PQKADQPYYAGRVADL-GVGVAHDGPT---PTVESLSAALATALT-PGIRARAAAVAGTIRT------DGTTVAAKLLLE 379 (404)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECSSSS---CCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC------CHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHC-CCEeccCcCC---CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh------hHHHHHHHHHHH
Confidence 9999999999999995 9999998766 899999999999998 9999999999988654 234444555554
Q ss_pred HH
Q 017266 369 LK 370 (374)
Q Consensus 369 ~~ 370 (374)
+.
T Consensus 380 ~~ 381 (404)
T 3h4t_A 380 AI 381 (404)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.97 E-value=3.2e-29 Score=239.96 Aligned_cols=209 Identities=15% Similarity=0.211 Sum_probs=168.0
Q ss_pred cEEEEcCCccCCcchhccCCCEEeecccCCCCCCCCccCCCCCCCccchhhhhcCCCCceEEEeecccccCCHHHHHHHH
Q 017266 129 NWILCNSFYELDSPACDLVPNILTIGPLLGSDHSEHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELA 208 (374)
Q Consensus 129 ~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 208 (374)
+..++.+.++++++...+..++.+|||+..... ...+|+...+++++|||++||......+.+..++
T Consensus 187 ~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~-------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~ 253 (402)
T 3ia7_A 187 GLTIVFLPKSFQPFAETFDERFAFVGPTLTGRD-------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACA 253 (402)
T ss_dssp SCEEESSCGGGSTTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHH
T ss_pred CeEEEEcChHhCCccccCCCCeEEeCCCCCCcc-------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHH
Confidence 778888888888764556788999999875311 1124444455667999999999766778899999
Q ss_pred HHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 209 LGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 209 ~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+++.+.+.+++|.++..... +. ....++|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++
T Consensus 254 ~~~~~~~~~~~~~~g~~~~~-------~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 323 (402)
T 3ia7_A 254 QAFADTPWHVVMAIGGFLDP-------AV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLV 323 (402)
T ss_dssp HHHTTSSCEEEEECCTTSCG-------GG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHhcCCcEEEEEeCCcCCh-------hh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEe
Confidence 99998889999988854111 11 1123678899999999999999998 99999999999999999999999
Q ss_pred cc-hhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHH
Q 017266 289 PY-FVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFIS 367 (374)
Q Consensus 289 P~-~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~ 367 (374)
|. ..||..||+++++. |+|+.+..++ ++.++|.++|+++++|++++++++++++.+.+ .+++.+..+.+.+
T Consensus 324 p~~~~~q~~~a~~~~~~-g~g~~~~~~~---~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 324 PHFATEAAPSAERVIEL-GLGSVLRPDQ---LEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEA 395 (402)
T ss_dssp GGGCGGGHHHHHHHHHT-TSEEECCGGG---CSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHc-CCEEEccCCC---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHH
Confidence 99 99999999999995 9999998766 89999999999999999999999999998876 4444444444433
Q ss_pred H
Q 017266 368 Q 368 (374)
Q Consensus 368 ~ 368 (374)
.
T Consensus 396 ~ 396 (402)
T 3ia7_A 396 Y 396 (402)
T ss_dssp H
T ss_pred H
Confidence 3
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=2.1e-29 Score=244.93 Aligned_cols=294 Identities=14% Similarity=0.112 Sum_probs=191.9
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCccccc
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELIL 87 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 87 (374)
.+.++++.+++.+ ||+||+|.+.+++..+|+.+|||++.+...+..........+... +..
T Consensus 132 ~~~~l~~~~~~~~----pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~~--~~~------------- 192 (441)
T 2yjn_A 132 LIEGMVSFCRKWR----PDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGLL--PDQ------------- 192 (441)
T ss_dssp HHHHHHHHHHHHC----CSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHG--GGS-------------
T ss_pred HHHHHHHHHHhcC----CCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhhc--ccc-------------
Confidence 4555555555444 999999998889999999999999998644322111100000000 000
Q ss_pred ccccCCCCccccccccCCCCCchhHHHHHHHHHHH-----HhccCccEEEEcCCccCCcchhccCCCEEeecccCCCCCC
Q 017266 88 LSEDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVA-----QSLKISNWILCNSFYELDSPACDLVPNILTIGPLLGSDHS 162 (374)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~ns~~~le~~~~~~~~~~~~vGpl~~~~~~ 162 (374)
+.. .......+.......... +.....+.++.++.+.++++ .+++. ..+++... .
T Consensus 193 --~~~------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~-~-- 252 (441)
T 2yjn_A 193 --PEE------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKT--VGMRYVDY-N-- 252 (441)
T ss_dssp --CTT------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCE--EECCCCCC-C--
T ss_pred --ccc------------cccchHHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCC-CCCCC--CceeeeCC-C--
Confidence 000 000001111111110000 00112456777777777653 33321 22232211 0
Q ss_pred CCccCCCCCCCccchhhhhcCCCCceEEEeecccccC---CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhh
Q 017266 163 EHSAINFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVL---SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFV 239 (374)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~---~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~ 239 (374)
.+.++.+|++..+++++|||++||.... ..+.+..+++++.+.+++++|+.+... ...+.
T Consensus 253 ---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~~~l~---- 315 (441)
T 2yjn_A 253 ---------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----LEGVA---- 315 (441)
T ss_dssp ---------SSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT----TSSCS----
T ss_pred ---------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----hhhhc----
Confidence 1223568998766677999999998543 345677888999888999999988541 11111
Q ss_pred hhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCc
Q 017266 240 ERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGII 319 (374)
Q Consensus 240 ~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 319 (374)
..++|+.+.+|+||.++|.++++ ||||||+||++|++++|+|+|++|...||..||+++++. |+|+.+...+ +
T Consensus 316 -~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~---~ 388 (441)
T 2yjn_A 316 -NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPE---L 388 (441)
T ss_dssp -SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTT---C
T ss_pred -cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccccc---C
Confidence 23678899999999999988888 999999999999999999999999999999999999995 9999998766 8
Q ss_pred CHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 320 TRQEIYNRVKALLNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 320 ~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
+.++|.++|+++++|++++++++++++.+++ .++. +.+.+.+..+
T Consensus 389 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 433 (441)
T 2yjn_A 389 TPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EPSP-AEVVGICEEL 433 (441)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CCCH-HHHHHHHHHH
Confidence 9999999999999999999999999999877 3333 4444444444
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=4.1e-29 Score=241.86 Aligned_cols=273 Identities=16% Similarity=0.183 Sum_probs=190.9
Q ss_pred CcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCcccccccccCCCCccccccc
Q 017266 23 EQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLSEDTLPWKKNEYIW 102 (374)
Q Consensus 23 ~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (374)
.+||+||+|.+.+++..+|+.+|||++.+++........... + ..+... . ....++...
T Consensus 103 ~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~-~---~~~~~~------~---~~~~~~~~~-------- 161 (430)
T 2iyf_A 103 DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEE-V---AEPMWR------E---PRQTERGRA-------- 161 (430)
T ss_dssp SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHH-T---HHHHHH------H---HHHSHHHHH--------
T ss_pred cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccc-c---ccchhh------h---hccchHHHH--------
Confidence 349999999987899999999999999988765421111000 0 000000 0 000000000
Q ss_pred cCCCCCchhHHHHHHHHH------HHHhccCccEEEEcCCccCCcchhccCCC-EEeecccCCCCCCCCccCCCCCCCcc
Q 017266 103 SFPSQPDVQKLYFEATSA------VAQSLKISNWILCNSFYELDSPACDLVPN-ILTIGPLLGSDHSEHSAINFWPEDST 175 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ns~~~le~~~~~~~~~-~~~vGpl~~~~~~~~~~~~~~~~~~~ 175 (374)
......+.... ..+....++.+++++.+.++++..+++++ +++|||+......
T Consensus 162 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~------------- 221 (430)
T 2iyf_A 162 -------YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAE------------- 221 (430)
T ss_dssp -------HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC------------------
T ss_pred -------HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCCC-------------
Confidence 00000000000 00011146889999999998764466778 9999986542110
Q ss_pred chhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecCh
Q 017266 176 CLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQ 254 (374)
Q Consensus 176 ~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq 254 (374)
..+|.+..+++++||+++||......+.+.++++++.+. +.+++|.++..... +.+ +..++|+.+.+|+||
T Consensus 222 ~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~-------~~l-~~~~~~v~~~~~~~~ 293 (430)
T 2iyf_A 222 EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP-------AEL-GELPDNVEVHDWVPQ 293 (430)
T ss_dssp CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG-------GGG-CSCCTTEEEESSCCH
T ss_pred CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-------HHh-ccCCCCeEEEecCCH
Confidence 124544445567999999999755678888999999885 78898988854111 111 123578899999999
Q ss_pred HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 255 EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 255 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
.++|+++++ ||||||+||++||+++|+|+|++|..+||..|++++++ .|+|+.+..++ ++.++|.++|+++++|
T Consensus 294 ~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 294 LAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLATEE---ATADLLRETALALVDD 367 (430)
T ss_dssp HHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCCC----CCHHHHHHHHHHHHHC
T ss_pred HHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCCCC---CCHHHHHHHHHHHHcC
Confidence 999999998 99999999999999999999999999999999999998 59999998765 8999999999999999
Q ss_pred hHHHHHHHHHHHHHHH
Q 017266 335 DGIKANALKMKEMARK 350 (374)
Q Consensus 335 ~~~~~~a~~l~~~~~~ 350 (374)
+++++++.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 368 PEVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998876
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.97 E-value=7.7e-29 Score=236.40 Aligned_cols=259 Identities=14% Similarity=0.144 Sum_probs=188.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchhhhHHhhhhhhhhhccccCCCCCCCCccccccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPAYLPLVLHIPKLVDAGILDSTGNATSDELILLS 89 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 89 (374)
.++++.+++.+ ||+||+|.+.+++..+|+.+|||++.+...+... .
T Consensus 97 ~~l~~~l~~~~----pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~----------------~-------------- 142 (384)
T 2p6p_A 97 PRMLDFSRAWR----PDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA----------------D-------------- 142 (384)
T ss_dssp HHHHHHHHHHC----CSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC----------------T--------------
T ss_pred HHHHHHHhccC----CcEEEECcchhhHHHHHHhcCCCEEEeccCCccc----------------c--------------
Confidence 34444444444 9999999988899999999999999875322100 0
Q ss_pred ccCCCCccccccccCCCCCchhHHHHHHHHHHH--HhccCccEEEEcCCccCCcchhccC-CCEEeecccCCCCCCCCcc
Q 017266 90 EDTLPWKKNEYIWSFPSQPDVQKLYFEATSAVA--QSLKISNWILCNSFYELDSPACDLV-PNILTIGPLLGSDHSEHSA 166 (374)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ns~~~le~~~~~~~-~~~~~vGpl~~~~~~~~~~ 166 (374)
++ .. . ..... ....... .....++.+++++.+.++++ .+++ .++.+++ . .
T Consensus 143 -~~-------~~-~------~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~---~-~------ 195 (384)
T 2p6p_A 143 -GI-------HP-G------ADAEL-RPELSELGLERLPAPDLFIDICPPSLRPA-NAAPARMMRHVA---T-S------ 195 (384)
T ss_dssp -TT-------HH-H------HHHHT-HHHHHHTTCSSCCCCSEEEECSCGGGSCT-TSCCCEECCCCC---C-C------
T ss_pred -hh-------hH-H------HHHHH-HHHHHHcCCCCCCCCCeEEEECCHHHCCC-CCCCCCceEecC---C-C------
Confidence 00 00 0 00000 0000000 00112678999999999865 3433 2333332 1 0
Q ss_pred CCCCCCCccchhhhhcCCCCceEEEeecccccC-----CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhh
Q 017266 167 INFWPEDSTCLSWLDKQAIGSVIYVAFGSAAVL-----SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVER 241 (374)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~~~vv~vs~GS~~~~-----~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~ 241 (374)
.+.++.+|++..+++++|||++||.... +.+.+..+++++.+.+.+++|+.+.. .. +.+ +.
T Consensus 196 -----~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~~----~~l-~~ 261 (384)
T 2p6p_A 196 -----RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT----VA----EAL-RA 261 (384)
T ss_dssp -----CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH----HH----HHH-HH
T ss_pred -----CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC----CH----Hhh-CC
Confidence 1234568988755667999999998653 45678889999998899999998742 00 111 12
Q ss_pred cCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCH
Q 017266 242 VSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITR 321 (374)
Q Consensus 242 ~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~ 321 (374)
.++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.+...+ ++.
T Consensus 262 ~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~~~---~~~ 334 (384)
T 2p6p_A 262 EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLPGE---DST 334 (384)
T ss_dssp HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTC---CCH
T ss_pred CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCcCC---CCH
Confidence 4778899 99999999988888 99999999999999999999999999999999999999 49999988665 899
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 017266 322 QEIYNRVKALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 322 ~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 350 (374)
++|.++|+++++|++++++++++++.+++
T Consensus 335 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 335 EAIADSCQELQAKDTYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.3e-28 Score=206.56 Aligned_cols=164 Identities=23% Similarity=0.442 Sum_probs=140.2
Q ss_pred CCCccchhhhhcCCCCceEEEeecccc-cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEE
Q 017266 171 PEDSTCLSWLDKQAIGSVIYVAFGSAA-VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFV 249 (374)
Q Consensus 171 ~~~~~~~~~l~~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (374)
+++.++.+|++..+++++|||++||.. ..+.+.+..+++++.+.+.+++|+.+... ++. .++|+.+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~~----~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PDT----LGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CTT----CCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------ccc----CCCcEEEe
Confidence 478889999998777779999999984 55788899999999988999999987541 111 25677999
Q ss_pred eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHH
Q 017266 250 EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 250 ~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
+|+||.+++.|++..+||||||++|++|++++|+|+|++|...||..||+++++ .|+|+.+...+ ++.++|.++|+
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~---~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNT---MSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTT---CCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecccc---CCHHHHHHHHH
Confidence 999999999776666799999999999999999999999999999999999999 49999998766 89999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHH
Q 017266 330 ALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 330 ~~l~~~~~~~~a~~l~~~~~~ 350 (374)
++++|++|+++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998874
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.94 E-value=2.6e-26 Score=219.98 Aligned_cols=160 Identities=16% Similarity=0.233 Sum_probs=124.5
Q ss_pred chhhhhcCCCCceEEEeecccccC--------CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcE
Q 017266 176 CLSWLDKQAIGSVIYVAFGSAAVL--------SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGK 247 (374)
Q Consensus 176 ~~~~l~~~~~~~vv~vs~GS~~~~--------~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (374)
+.+|+...+++++|||++||.... ..+.+..+++++.+.+.+++|+.+... .. .+ ...++|++
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~----~~----~l-~~~~~~v~ 287 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL----AQ----TL-QPLPEGVL 287 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEE
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc----hh----hh-ccCCCcEE
Confidence 457887666677999999998432 335688899999888999999887541 11 11 12367889
Q ss_pred EEeecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHH
Q 017266 248 FVEWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNR 327 (374)
Q Consensus 248 ~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 327 (374)
+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|++++++. |+|+.+...+ ++.+.|.++
T Consensus 288 ~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~---~~~~~l~~a 361 (398)
T 4fzr_A 288 AAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWEQ---AGVESVLAA 361 (398)
T ss_dssp EESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHH
T ss_pred EeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCccc---CCHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999995 9999998766 789999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHH
Q 017266 328 VKALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 328 i~~~l~~~~~~~~a~~l~~~~~~ 350 (374)
|+++++|+++++++++.++.+++
T Consensus 362 i~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 362 CARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHHCTHHHHHHHHHHHHHTT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHc
Confidence 99999999999999999999876
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.93 E-value=7.3e-25 Score=209.24 Aligned_cols=159 Identities=18% Similarity=0.313 Sum_probs=134.0
Q ss_pred chhhhhcCCCCceEEEeeccccc---CCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee
Q 017266 176 CLSWLDKQAIGSVIYVAFGSAAV---LSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW 251 (374)
Q Consensus 176 ~~~~l~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (374)
+..|+...+++++||+++||... ...+.+..++++ .+. +.+++|+.+.. ..+.+ ...++|+++.+|
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~ 277 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE----HRALL-----TDLPDNARIAES 277 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG----GGGGC-----TTCCTTEEECCS
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc----chhhc-----ccCCCCEEEecc
Confidence 44677766667799999999832 337778888888 777 78899988754 11111 123678899999
Q ss_pred cChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec--CCCCCcCHHHHHHHHH
Q 017266 252 APQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP--DENGIITRQEIYNRVK 329 (374)
Q Consensus 252 ~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~--~~~~~~~~~~l~~~i~ 329 (374)
+|+.++|.++++ ||||||.||++||+++|+|+|++|...||..|++++++. |+|+.+.. .+ .+.+.|.++|.
T Consensus 278 ~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~---~~~~~l~~ai~ 351 (391)
T 3tsa_A 278 VPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQAQ---SDHEQFTDSIA 351 (391)
T ss_dssp CCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHHH---TCHHHHHHHHH
T ss_pred CCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCccccc---CCHHHHHHHHH
Confidence 999999988888 999999999999999999999999999999999999995 99999987 55 78999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHH
Q 017266 330 ALLNDDGIKANALKMKEMARK 350 (374)
Q Consensus 330 ~~l~~~~~~~~a~~l~~~~~~ 350 (374)
++++|++++++++++++.+.+
T Consensus 352 ~ll~~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 352 TVLGDTGFAAAAIKLSDEITA 372 (391)
T ss_dssp HHHTCTHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHc
Confidence 999999999999999998876
No 19
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.93 E-value=5.1e-25 Score=211.00 Aligned_cols=170 Identities=14% Similarity=0.188 Sum_probs=137.7
Q ss_pred chhhhhcCCCCceEEEeecccccC--CHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC
Q 017266 176 CLSWLDKQAIGSVIYVAFGSAAVL--SQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP 253 (374)
Q Consensus 176 ~~~~l~~~~~~~vv~vs~GS~~~~--~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (374)
+.+|+...+++++|||++||.... ..+.+..+++++.+.+.+++|+.+... .+.+ +..++|+.+.+|+|
T Consensus 222 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--------~~~l-~~~~~~v~~~~~~~ 292 (398)
T 3oti_A 222 LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--------ISPL-GTLPRNVRAVGWTP 292 (398)
T ss_dssp CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--------CGGG-CSCCTTEEEESSCC
T ss_pred CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--------hhhh-ccCCCcEEEEccCC
Confidence 346666556677999999998432 556788899999988999999988651 1111 12367889999999
Q ss_pred hHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhH--HHHHhHhcceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 254 QEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNR--NYICDAWKVGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 254 q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+.++|+++++ ||||||.||++||+++|+|+|++|...||..|| +++++. |+|+.+...+ ++.+.|. ++
T Consensus 293 ~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~~---~~~~~l~----~l 362 (398)
T 3oti_A 293 LHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSDK---VDADLLR----RL 362 (398)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGGG---CCHHHHH----HH
T ss_pred HHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCCC---CCHHHHH----HH
Confidence 9999999998 999999999999999999999999999999999 999995 9999998765 7887776 88
Q ss_pred hcChHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 332 LNDDGIKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 332 l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
++|++++++++++++.+++ ..+ .+.+.+.+..+
T Consensus 363 l~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~l~~l 395 (398)
T 3oti_A 363 IGDESLRTAAREVREEMVA----LPT-PAETVRRIVER 395 (398)
T ss_dssp HHCHHHHHHHHHHHHHHHT----SCC-HHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHHHh----CCC-HHHHHHHHHHH
Confidence 8999999999999999887 333 34444555444
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.92 E-value=4.6e-23 Score=197.93 Aligned_cols=161 Identities=22% Similarity=0.430 Sum_probs=136.8
Q ss_pred chhh-hhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecCh
Q 017266 176 CLSW-LDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQ 254 (374)
Q Consensus 176 ~~~~-l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq 254 (374)
..+| ....+++++|++++||......+.+..+++++.+.+.+++|+.+.... .+.+ +..++++.+.+|+|+
T Consensus 231 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~l-----~~~~~~v~~~~~~~~ 302 (412)
T 3otg_A 231 LPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD---VSGL-----GEVPANVRLESWVPQ 302 (412)
T ss_dssp CCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC---CTTC-----CCCCTTEEEESCCCH
T ss_pred CCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC---hhhh-----ccCCCcEEEeCCCCH
Confidence 3456 333455669999999997566788999999999889999999886521 1111 123577899999999
Q ss_pred HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 255 EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 255 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
.++|+++++ ||+|||+||++||+++|+|+|++|...||..|++.+++. |+|+.+...+ ++.++|.++|.++++|
T Consensus 303 ~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~~---~~~~~l~~ai~~ll~~ 376 (412)
T 3otg_A 303 AALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDN---ISPDSVSGAAKRLLAE 376 (412)
T ss_dssp HHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGGG---CCHHHHHHHHHHHHHC
T ss_pred HHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCccc---CCHHHHHHHHHHHHhC
Confidence 999999998 999999999999999999999999999999999999995 9999998766 7999999999999999
Q ss_pred hHHHHHHHHHHHHHHH
Q 017266 335 DGIKANALKMKEMARK 350 (374)
Q Consensus 335 ~~~~~~a~~l~~~~~~ 350 (374)
+++++++.+.++.+.+
T Consensus 377 ~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 377 ESYRAGARAVAAEIAA 392 (412)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988877
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.81 E-value=9.9e-19 Score=165.45 Aligned_cols=168 Identities=10% Similarity=0.058 Sum_probs=117.9
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhc----CCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH-Hhh
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLES----LHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE-KVL 258 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~----~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~-~lL 258 (374)
+++++|+|..||..... ..+.+.+++.+ .+..++|+++... .+... ......+.++.+.+|+++. ++|
T Consensus 178 ~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~----~~~~~-~~~~~~~~~~~v~~f~~dm~~~l 250 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH----AEITA-ERYRTVAVEADVAPFISDMAAAY 250 (365)
T ss_dssp TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT----HHHHH-HHHHHTTCCCEEESCCSCHHHHH
T ss_pred CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc----ccccc-ceecccccccccccchhhhhhhh
Confidence 34558999999985432 22334455543 3456788877541 11111 1112335678889999986 599
Q ss_pred CCCCCCcEEeccCchhHHHHhhcCcccccccch----hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 259 GHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF----VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 259 ~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
+.+++ +|||+|.+|+.|++++|+|+|.+|+. .||..||+.+++. |+|+.+...+ ++.+.|.++|.++++|
T Consensus 251 ~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~~---~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 251 AWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQKS---TGAAELAAQLSEVLMH 324 (365)
T ss_dssp HHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTTT---CCHHHHHHHHHHHHHC
T ss_pred ccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecCC---CCHHHHHHHHHHHHCC
Confidence 99999 99999999999999999999999974 5899999999995 9999998877 8999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 335 DGIKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 335 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
++.++++.+-++.+. .. .+.+.+.+.+.++
T Consensus 325 ~~~~~~m~~~a~~~~----~~-~aa~~ia~~i~~l 354 (365)
T 3s2u_A 325 PETLRSMADQARSLA----KP-EATRTVVDACLEV 354 (365)
T ss_dssp THHHHHHHHHHHHTC----CT-THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC----Cc-cHHHHHHHHHHHH
Confidence 875554433333221 12 3455555555544
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.61 E-value=1.5e-15 Score=132.23 Aligned_cols=132 Identities=10% Similarity=0.065 Sum_probs=94.3
Q ss_pred CCCCceEEEeecccccCCHHHHHHH-----HHHHhcCC-CCEEEEEcCCCCCccccCCCchhhhhc--------------
Q 017266 183 QAIGSVIYVAFGSAAVLSQQQLEEL-----ALGLESLH-QPFLWVVRPDFMNRSHAKLPDGFVERV-------------- 242 (374)
Q Consensus 183 ~~~~~vv~vs~GS~~~~~~~~~~~~-----~~~l~~~~-~~viw~~~~~~~~~~~~~~~~~~~~~~-------------- 242 (374)
.+++++|||++||... -.+.+..+ +++|.+.+ .+++|++|.... .....+....
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhccccccccccccc
Confidence 3456699999999832 34444444 48888777 799999997621 0011100000
Q ss_pred ------------CC--CcEEEeecChH-HhhC-CCCCCcEEeccCchhHHHHhhcCcccccccch----hhhhhhHHHHH
Q 017266 243 ------------SD--RGKFVEWAPQE-KVLG-HPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF----VDQYQNRNYIC 302 (374)
Q Consensus 243 ------------~~--~~~~~~~~pq~-~lL~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~ 302 (374)
.. ++.+.+|+++. .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 11 33455888876 6999 9999 99999999999999999999999984 47999999999
Q ss_pred hHhcceeEeecCCCCCcCHHHHHHHHHHH
Q 017266 303 DAWKVGSQFFPDENGIITRQEIYNRVKAL 331 (374)
Q Consensus 303 ~~~g~G~~l~~~~~~~~~~~~l~~~i~~~ 331 (374)
+. |+++.+. .++|.++|+++
T Consensus 177 ~~-G~~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 177 EL-GYVWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp HH-SCCCEEC--------SCTTTHHHHHH
T ss_pred HC-CCEEEcC--------HHHHHHHHHHH
Confidence 95 9998763 34456666665
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.45 E-value=1.7e-12 Score=121.91 Aligned_cols=146 Identities=12% Similarity=0.078 Sum_probs=106.5
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhcC--CCCEEEEEcCCCCCccccCCCchhhh---hcC-CCcEEEeecCh-HH
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLESL--HQPFLWVVRPDFMNRSHAKLPDGFVE---RVS-DRGKFVEWAPQ-EK 256 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~viw~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~pq-~~ 256 (374)
+++++|+++.|+... ......+++++... +.++++.+|... .+.+.+ +.. +++.+.+|+++ ..
T Consensus 181 ~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~ 250 (364)
T 1f0k_A 181 EGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAA 250 (364)
T ss_dssp CSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHH
T ss_pred CCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHH
Confidence 344577777788743 33344455555443 566677777651 122221 112 47889999854 56
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhcCcccccccch---hhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYF---VDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
+++.+++ +|+++|.++++||+++|+|+|+.|.. .||..|++.+.+. |.|+.+...+ ++.+++.++|.++
T Consensus 251 ~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~d---~~~~~la~~i~~l-- 322 (364)
T 1f0k_A 251 AYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQPQ---LSVDAVANTLAGW-- 322 (364)
T ss_dssp HHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGGG---CCHHHHHHHHHTC--
T ss_pred HHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecccc---CCHHHHHHHHHhc--
Confidence 9999999 99999999999999999999999987 7999999999985 9999987765 6799999999988
Q ss_pred ChHHHHHHHHHHHH
Q 017266 334 DDGIKANALKMKEM 347 (374)
Q Consensus 334 ~~~~~~~a~~l~~~ 347 (374)
|++.+++..+-+..
T Consensus 323 ~~~~~~~~~~~~~~ 336 (364)
T 1f0k_A 323 SRETLLTMAERARA 336 (364)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 77766655544433
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.32 E-value=7.9e-11 Score=106.51 Aligned_cols=115 Identities=7% Similarity=0.043 Sum_probs=87.5
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecChHH-hhCCCC
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQEK-VLGHPS 262 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~~-lL~~~~ 262 (374)
.+.|+|++|..... .....++++|.+.. ++.++.+... ...+.+.+.. ..|+.+..|+++.. ++..++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 45799999875322 24556777776544 5777777651 1112222211 24788889998875 999999
Q ss_pred CCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeec
Q 017266 263 VACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFP 313 (374)
Q Consensus 263 ~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~ 313 (374)
+ +||+|| +|++|+++.|+|+|.+|...+|..||+.+++. |+++.+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9 999999 89999999999999999999999999999995 99998875
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.74 E-value=2.7e-08 Score=94.72 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=84.7
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCccccCCCchhhhh--cCCCcEEEeecC---h
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLES-----LHQPFLWVVRPDFMNRSHAKLPDGFVER--VSDRGKFVEWAP---Q 254 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~viw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p---q 254 (374)
++++|+++.+-...... .+..+++++.+ .+.++++..+.+. ...+.+.+. ..+++.+.++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP------NVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------HHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh------HHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 34577766532222222 24555665543 2456666555320 011111111 135778877765 3
Q ss_pred HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 255 EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 255 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
..+++.+++ +|+..| |.+.||.++|+|+|+..-..+++ .+++. |.++.+. .+.++|.+++.++++|
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~------~d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG------TNQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT------TCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC------CCHHHHHHHHHHHHcC
Confidence 358889999 999988 66679999999999875444442 23454 8776553 2589999999999999
Q ss_pred hHHHHHHHH
Q 017266 335 DGIKANALK 343 (374)
Q Consensus 335 ~~~~~~a~~ 343 (374)
++.+++..+
T Consensus 368 ~~~~~~m~~ 376 (396)
T 3dzc_A 368 PQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 876665444
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.73 E-value=8.7e-08 Score=91.38 Aligned_cols=139 Identities=11% Similarity=0.120 Sum_probs=85.9
Q ss_pred CCCceEEEeecccccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCccccCCCchhhh--hcCCCcEEEeecCh--
Q 017266 184 AIGSVIYVAFGSAAVLSQQQLEELALGLES-----LHQPFLWVVRPDFMNRSHAKLPDGFVE--RVSDRGKFVEWAPQ-- 254 (374)
Q Consensus 184 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~viw~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~pq-- 254 (374)
+++++++++.|....... .+..+++++.+ .+.++++..+++. ...+.+.+ ...+++.+.+++++
T Consensus 222 ~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~------~~~~~l~~~~~~~~~v~l~~~l~~~~ 294 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP------AVREKAMAILGGHERIHLIEPLDAID 294 (403)
T ss_dssp TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH------HHHHHHHHHhCCCCCEEEeCCCCHHH
Confidence 344577777664322111 23444554432 3456666654320 00011111 11357888888863
Q ss_pred -HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 255 -EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 255 -~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
..+++++++ +|+..|.. ..||.++|+|+|+.|-..+++. +++. |.|+.+. .+.++|.+++.++++
T Consensus 295 ~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~------~d~~~l~~ai~~ll~ 360 (403)
T 3ot5_A 295 FHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG------TNKENLIKEALDLLD 360 (403)
T ss_dssp HHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC------CCHHHHHHHHHHHHc
Confidence 348888998 99887532 3699999999999976565544 2454 8887764 368999999999999
Q ss_pred ChHHHHHHHH
Q 017266 334 DDGIKANALK 343 (374)
Q Consensus 334 ~~~~~~~a~~ 343 (374)
|++.+++..+
T Consensus 361 ~~~~~~~m~~ 370 (403)
T 3ot5_A 361 NKESHDKMAQ 370 (403)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHh
Confidence 9876655443
No 27
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.49 E-value=2.5e-07 Score=87.52 Aligned_cols=135 Identities=16% Similarity=0.166 Sum_probs=82.9
Q ss_pred CceEEEeecccccCC-HHHHHHHHHHHhcC----CCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecC---hHHh
Q 017266 186 GSVIYVAFGSAAVLS-QQQLEELALGLESL----HQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAP---QEKV 257 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~-~~~~~~~~~~l~~~----~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---q~~l 257 (374)
++++++++|...... .+.+..+++++.+. +..+|+...+... ...... .++. ...+++.+.+.++ ...+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~-~~l~~~-~~~~-~~~~~v~l~~~lg~~~~~~l 279 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTK-KRLEDL-EGFK-ELGDKIRFLPAFSFTDYVKL 279 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHH-HHHHTS-GGGG-GTGGGEEECCCCCHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHH-HHHHHH-HHHh-cCCCCEEEEcCCCHHHHHHH
Confidence 458888888764332 24456666666442 5677776542200 000000 0000 0024667765554 3468
Q ss_pred hCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 258 LGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
++++++ +||-.|. .+.||.++|+|+|.++...+.+. .++. |.++.+. .+.++|.+++.++++|+..
T Consensus 280 ~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 280 QMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp HHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC------SSHHHHHHHHHHHHTTCBT
T ss_pred HHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC------CCHHHHHHHHHHHHhChHH
Confidence 899998 9999886 46999999999999986543222 2454 8776653 3789999999999988753
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.44 E-value=1.5e-05 Score=74.78 Aligned_cols=85 Identities=16% Similarity=0.095 Sum_probs=63.1
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe-----------ccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcce
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS-----------HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVG 308 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 308 (374)
.+++.+.+|+|+.+ ++..+++ +|. -|.-++++||+++|+|+|+.+..+ ....+.+ |.|
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~~--~~g 323 (394)
T 3okp_A 252 SQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVTP--ATG 323 (394)
T ss_dssp GGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCCT--TTE
T ss_pred cCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHhc--CCc
Confidence 57888999997665 7888898 775 455578999999999999977532 2222222 577
Q ss_pred eEeecCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 309 SQFFPDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 309 ~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+.+.. -+.+++.++|.++++|++.+++
T Consensus 324 ~~~~~-----~d~~~l~~~i~~l~~~~~~~~~ 350 (394)
T 3okp_A 324 LVVEG-----SDVDKLSELLIELLDDPIRRAA 350 (394)
T ss_dssp EECCT-----TCHHHHHHHHHHHHTCHHHHHH
T ss_pred eEeCC-----CCHHHHHHHHHHHHhCHHHHHH
Confidence 77765 3789999999999998874433
No 29
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.40 E-value=6.4e-07 Score=74.97 Aligned_cols=139 Identities=12% Similarity=0.133 Sum_probs=89.2
Q ss_pred EEEeecccccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCccccCCCchh---hhhcCCCcEEEeecCh---HHhhCCC
Q 017266 189 IYVAFGSAAVLSQQQLEELALGLESL-HQPFLWVVRPDFMNRSHAKLPDGF---VERVSDRGKFVEWAPQ---EKVLGHP 261 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~~~~~~l~~~-~~~viw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pq---~~lL~~~ 261 (374)
+++..|+... .+.+..+++++... +.+++++-... ....+.+.. .....+++.+.+|+++ ..+++.+
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4556677642 23455667777665 55655543322 111111111 1123568899999997 3588889
Q ss_pred CCCcEEe---ccCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 262 SVACFLS---HCGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 262 ~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
++ +|. +.|+ ++++||+++|+|+|+.+. ..+...+.+. +.|+.+ . -+.+++.++|.++++|++.
T Consensus 99 di--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 99 KG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp SE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTTT
T ss_pred CE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHHH
Confidence 98 665 3344 589999999999998754 3444445543 678887 3 4789999999999988874
Q ss_pred -HHHHHHHHH
Q 017266 338 -KANALKMKE 346 (374)
Q Consensus 338 -~~~a~~l~~ 346 (374)
++++++.++
T Consensus 166 ~~~~~~~~a~ 175 (177)
T 2f9f_A 166 FKKDCFRRAK 175 (177)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 666655543
No 30
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.40 E-value=1.2e-06 Score=82.04 Aligned_cols=84 Identities=19% Similarity=0.180 Sum_probs=62.4
Q ss_pred CCcEEEeecChH---HhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcC
Q 017266 244 DRGKFVEWAPQE---KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIIT 320 (374)
Q Consensus 244 ~~~~~~~~~pq~---~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~ 320 (374)
+++.+.+++++. .+++.+++ ||+..| +.++||+++|+|+|+.+..+.. . .+.+. |.|+.+.. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~-e~v~~-g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---P-EGIEA-GTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---H-HHHHT-TSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---c-eeecC-CceEEcCC------C
Confidence 678887777654 58889999 998874 4588999999999988543332 2 23453 88887742 6
Q ss_pred HHHHHHHHHHHhcChHHHHHH
Q 017266 321 RQEIYNRVKALLNDDGIKANA 341 (374)
Q Consensus 321 ~~~l~~~i~~~l~~~~~~~~a 341 (374)
.+++.++|.++++|++.+++.
T Consensus 329 ~~~la~~i~~ll~~~~~~~~~ 349 (375)
T 3beo_A 329 EETIFSLADELLSDKEAHDKM 349 (375)
T ss_dssp HHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhChHhHhhh
Confidence 789999999999988755543
No 31
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.31 E-value=9e-05 Score=70.65 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=63.2
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEecc----CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSHC----GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|+. .+++.+++ +|.-. .-++++||+++|+|+|+.+. ......+.+. +.|+.+..
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4688999999864 48888998 77543 24689999999999998764 3344445553 57888765
Q ss_pred CCCcCHHHHHHHHHHHhcChHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
-+.+++.++|.++++|++.+
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~ 395 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETR 395 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHH
T ss_pred ---CCHHHHHHHHHHHHcCHHHH
Confidence 37899999999999988643
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.29 E-value=5e-07 Score=84.97 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=85.3
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecCh---
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLES-----LHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQ--- 254 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq--- 254 (374)
++++++++.|+..... +.+..+++++.. .+.++++..+.+ ....+.+.+.. .+++.+.++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3457788888764332 234445555433 244555543422 00111111111 257888666654
Q ss_pred HHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC
Q 017266 255 EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLND 334 (374)
Q Consensus 255 ~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 334 (374)
..+++.+++ ||+.+|. .++||+++|+|+|+.|..++. ..+.+. |.|+.+.. +.+++.++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~------d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT------DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS------SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC------CHHHHHHHHHHHHhC
Confidence 458899999 9999864 488999999999999864433 234554 88888753 688999999999998
Q ss_pred hHHHHH
Q 017266 335 DGIKAN 340 (374)
Q Consensus 335 ~~~~~~ 340 (374)
++.+++
T Consensus 343 ~~~~~~ 348 (384)
T 1vgv_A 343 ENEYQA 348 (384)
T ss_dssp HHHHHH
T ss_pred hHHHhh
Confidence 875544
No 33
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.21 E-value=8.2e-07 Score=83.34 Aligned_cols=136 Identities=16% Similarity=0.197 Sum_probs=85.3
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCccccCCCchhhhhc--CCCcEEEeecCh---H
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLES-----LHQPFLWVVRPDFMNRSHAKLPDGFVERV--SDRGKFVEWAPQ---E 255 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~viw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq---~ 255 (374)
+++|+++.|...... .+..+++++.. .+..+++..+.+. ...+.+.+.. .+++.+.++++. .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~------~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP------VVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH------HHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 347777777553221 23445555432 2455555545330 0011111111 357888855554 4
Q ss_pred HhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 256 KVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 256 ~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
.+++.+++ ||+++| +.++||+++|+|+|+.|..+++.. +.+. |.|+.+. .+.++|.++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 68999999 999884 446699999999999876565554 2454 8888774 27899999999999998
Q ss_pred HHHHHHHH
Q 017266 336 GIKANALK 343 (374)
Q Consensus 336 ~~~~~a~~ 343 (374)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 75555443
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.17 E-value=0.00018 Score=67.57 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=60.6
Q ss_pred CCcEEEeecCh-HHhhCCCCCCcEE----eccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 244 DRGKFVEWAPQ-EKVLGHPSVACFL----SHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 244 ~~~~~~~~~pq-~~lL~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
+++.+.++..+ ..+++.+++ +| .-|.-++++||+++|+|+|+.+..+ ....+.+. +.|+.+..
T Consensus 267 ~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCC-----
Confidence 56677776544 358999998 77 4455679999999999999877532 22233332 57887765
Q ss_pred cCHHHHHHHHHHHhcChHHHH
Q 017266 319 ITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~~~~~ 339 (374)
-+.+++.++|.++++|++.++
T Consensus 335 ~d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp TCHHHHHHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHH
Confidence 368999999999999887443
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.06 E-value=0.00024 Score=66.80 Aligned_cols=86 Identities=14% Similarity=0.236 Sum_probs=64.5
Q ss_pred CCCcEEEeecChH---HhhCCCCCCcEEec----cCc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 243 SDRGKFVEWAPQE---KVLGHPSVACFLSH----CGW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 243 ~~~~~~~~~~pq~---~lL~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
.+++.+.+++++. .++..+++ +|.- .|. ++++||+++|+|+|+.+. ......+.+. +.|+.+...
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~ 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC
Confidence 4678888999875 58889998 6643 333 589999999999998765 3344555553 678777653
Q ss_pred CCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+.+++.++|.++++|++.+++
T Consensus 335 -----d~~~l~~~i~~l~~~~~~~~~ 355 (406)
T 2gek_A 335 -----DADGMAAALIGILEDDQLRAG 355 (406)
T ss_dssp -----CHHHHHHHHHHHHHCHHHHHH
T ss_pred -----CHHHHHHHHHHHHcCHHHHHH
Confidence 689999999999998874443
No 36
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.98 E-value=0.00024 Score=67.43 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=79.6
Q ss_pred eEEEeecccc-c-CCHHHHHHHHHHHhc----CCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hh
Q 017266 188 VIYVAFGSAA-V-LSQQQLEELALGLES----LHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VL 258 (374)
Q Consensus 188 vv~vs~GS~~-~-~~~~~~~~~~~~l~~----~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL 258 (374)
.+++..|+.. . -..+.+-+.+..+.+ .+.++ ..+|.... .....-..+.++.++++.+.+|+++.+ ++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l-~i~G~g~~--~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-IIIGKGDP--ELEGWARSLEEKHGNVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEE-EEECCCCH--HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEE-EEEcCCCh--hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHH
Confidence 6677778875 3 234445455555544 23443 34443310 000000111222344445568898864 78
Q ss_pred CCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc-
Q 017266 259 GHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN- 333 (374)
Q Consensus 259 ~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~- 333 (374)
+.+++ +|.- |--++++||+++|+|+|+-.. ...... .+. |.|+.+... +.+++.++|.++++
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~-~~~-~~g~~~~~~-----d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDI-ITN-ETGILVKAG-----DPGELANAILKALEL 395 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHH-CCT-TTCEEECTT-----CHHHHHHHHHHHHHH
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCccee-EEc-CceEEeCCC-----CHHHHHHHHHHHHhc
Confidence 89998 6643 223789999999999998654 233333 333 788888753 78999999999998
Q ss_pred ChH
Q 017266 334 DDG 336 (374)
Q Consensus 334 ~~~ 336 (374)
|++
T Consensus 396 ~~~ 398 (439)
T 3fro_A 396 SRS 398 (439)
T ss_dssp TTT
T ss_pred CHH
Confidence 765
No 37
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.82 E-value=0.0025 Score=61.84 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=62.5
Q ss_pred CCCcEEEeecChHH---hhCCC----CCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEe
Q 017266 243 SDRGKFVEWAPQEK---VLGHP----SVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQF 311 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l 311 (374)
.+++.+.+++|+.+ +++.+ ++ +|.-. | -++++||+++|+|+|+... ......+.+. +.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 46788999997654 77888 88 66432 3 3689999999999998753 2334444442 478888
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcChHHHH
Q 017266 312 FPDENGIITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 312 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 339 (374)
.. -+.+++.++|.++++|++.++
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~ 429 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWS 429 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHH
Confidence 65 378999999999999887443
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.73 E-value=0.00025 Score=65.78 Aligned_cols=133 Identities=18% Similarity=0.299 Sum_probs=87.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCC----C-EEEEEcCCCCCccccCCCchhhh---h--cCCCcEEEeecChH-H
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQ----P-FLWVVRPDFMNRSHAKLPDGFVE---R--VSDRGKFVEWAPQE-K 256 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~----~-viw~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~pq~-~ 256 (374)
.+++..|+... .+.+..+++++..... . -++.+|.+. .+.+.+ + ..+++.+.++..+. .
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 266 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------PRKFEALAEKLGVRSNVHFFSGRNDVSE 266 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------CHHHHHHHHHHTCGGGEEEESCCSCHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------HHHHHHHHHHcCCCCcEEECCCcccHHH
Confidence 56667787632 2334556666665432 1 345555431 122211 1 14678888876543 5
Q ss_pred hhCCCCCCcEEe----ccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 257 VLGHPSVACFLS----HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 257 lL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
+++.+++ +|. -|.-++++||+++|+|+|+.+. ..+...+.+. +.|+.+... -+.+++.++|.+++
T Consensus 267 ~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~----~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 267 LMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEP----FSQEQLNEVLRKAL 335 (374)
T ss_dssp HHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSS----CCHHHHHHHHHHHH
T ss_pred HHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCC----CCHHHHHHHHHHHH
Confidence 8888998 775 4556889999999999998764 3445666764 889988632 37899999999999
Q ss_pred cChHHHHHH
Q 017266 333 NDDGIKANA 341 (374)
Q Consensus 333 ~~~~~~~~a 341 (374)
+|++.+++.
T Consensus 336 ~~~~~~~~~ 344 (374)
T 2iw1_A 336 TQSPLRMAW 344 (374)
T ss_dssp HCHHHHHHH
T ss_pred cChHHHHHH
Confidence 988754443
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.72 E-value=0.00043 Score=70.65 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=95.2
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhh-----c-CCCcEEEeecChHH--
Q 017266 185 IGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVER-----V-SDRGKFVEWAPQEK-- 256 (374)
Q Consensus 185 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~pq~~-- 256 (374)
+..++|.+|-+....+++.+....+-|++.+..++|....+.. ...++.+. + ++++.+.+..|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------GHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------HHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 3458999998888999999999999999999999999875511 01122111 1 35677788888665
Q ss_pred -hhCCCCCCcEEe---ccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHh
Q 017266 257 -VLGHPSVACFLS---HCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALL 332 (374)
Q Consensus 257 -lL~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l 332 (374)
.+..+++ ++- .+|.+|++||+++|||+|.+|-..---..+..+-..+|+.-.+-. +.++-.+.--++-
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~------~~~~Y~~~a~~la 666 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK------NRQEYEDIAVKLG 666 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS------SHHHHHHHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC------CHHHHHHHHHHHh
Confidence 4456666 876 789999999999999999999432222234333333576655432 4555444444566
Q ss_pred cChHHHHH
Q 017266 333 NDDGIKAN 340 (374)
Q Consensus 333 ~~~~~~~~ 340 (374)
+|.+....
T Consensus 667 ~d~~~l~~ 674 (723)
T 4gyw_A 667 TDLEYLKK 674 (723)
T ss_dssp HCHHHHHH
T ss_pred cCHHHHHH
Confidence 67664443
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.67 E-value=0.0019 Score=63.82 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=63.2
Q ss_pred CCcEEEeecChH---HhhCCCCCCcEEe---ccCchhHHHHhhcCcccccccchhhhhh-hHHHHHhHhcceeEeecCCC
Q 017266 244 DRGKFVEWAPQE---KVLGHPSVACFLS---HCGWNSSIEGLSMGVPFLCWPYFVDQYQ-NRNYICDAWKVGSQFFPDEN 316 (374)
Q Consensus 244 ~~~~~~~~~pq~---~lL~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~-na~~v~~~~g~G~~l~~~~~ 316 (374)
+++.+.+++|+. .++..+++ ||. +|+-++++||+++|+|+|++|-..-... .+..+.. .|+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC---
Confidence 678889999854 47888888 762 2556789999999999999875321111 2334444 366555532
Q ss_pred CCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 317 GIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
+.+++.+++.++++|++.+++..
T Consensus 508 ---~~~~la~~i~~l~~~~~~~~~~~ 530 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDPAALTALH 530 (568)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHHHHHHHH
Confidence 78899999999999987555433
No 41
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.51 E-value=0.00033 Score=57.18 Aligned_cols=133 Identities=12% Similarity=0.231 Sum_probs=73.4
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC--CCE-EEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHH---hhCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH--QPF-LWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEK---VLGHP 261 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~--~~v-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---lL~~~ 261 (374)
++++..|+... .+....+++++.... ..+ ++.+|... ....+ ....++...++.+ +|+|+.+ ++..+
T Consensus 3 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 3 FKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP---DEKKI-KLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp EEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST---THHHH-HHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred eEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc---cHHHH-HHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 56677777632 233455666665542 122 33344320 00000 1111222346677 8988654 78899
Q ss_pred CCCcEEec----cCchhHHHHhhcCc-ccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 262 SVACFLSH----CGWNSSIEGLSMGV-PFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 262 ~~~~~I~H----gG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
++ +|.- |.-++++||+++|+ |+|+....+. ....+.+. +. .+.. -+.+++.++|.++++|++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~-----~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP-----NNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT-----TCHHHHHHHHHHHHHCHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC-----CCHHHHHHHHHHHHhCHH
Confidence 98 7652 33468999999996 9999332111 11111121 22 3333 378999999999999887
Q ss_pred HHHH
Q 017266 337 IKAN 340 (374)
Q Consensus 337 ~~~~ 340 (374)
.+++
T Consensus 143 ~~~~ 146 (166)
T 3qhp_A 143 ERER 146 (166)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.50 E-value=0.00094 Score=66.02 Aligned_cols=145 Identities=12% Similarity=0.034 Sum_probs=93.7
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEE--cCCCCCccccCCCchh-hhhcCCCcEEEeecChHH---hhCC
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVV--RPDFMNRSHAKLPDGF-VERVSDRGKFVEWAPQEK---VLGH 260 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pq~~---lL~~ 260 (374)
.++|.+|++.....++.++...+-+++.+..++|.. +... +....+-..+ ...+.+++.+.+..|..+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 588999998888889999999999988888888753 3220 0000000011 112346777888888765 4478
Q ss_pred CCCCcEEe---ccCchhHHHHhhcCcccccccchhhhhhhH-HHHHhHhcceeE-eecCCCCCcCHHHHHHHHHHHhcCh
Q 017266 261 PSVACFLS---HCGWNSSIEGLSMGVPFLCWPYFVDQYQNR-NYICDAWKVGSQ-FFPDENGIITRQEIYNRVKALLNDD 335 (374)
Q Consensus 261 ~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~~l~~~ 335 (374)
+++ |+. .+|.+|++||+++|||+|..+-..=....+ ..+.. .|+.-. +. -+.++..+..-++.+|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHHhCCH
Confidence 887 654 377899999999999999988532222222 22333 466532 32 26777777777899998
Q ss_pred HHHHHHH
Q 017266 336 GIKANAL 342 (374)
Q Consensus 336 ~~~~~a~ 342 (374)
+.+++.+
T Consensus 590 ~~l~~LR 596 (631)
T 3q3e_A 590 QERLELR 596 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655543
No 43
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.30 E-value=0.0029 Score=53.10 Aligned_cols=83 Identities=14% Similarity=0.095 Sum_probs=61.4
Q ss_pred CcEE-EeecChH---HhhCCCCCCcEEecc---C-chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCC
Q 017266 245 RGKF-VEWAPQE---KVLGHPSVACFLSHC---G-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDEN 316 (374)
Q Consensus 245 ~~~~-~~~~pq~---~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 316 (374)
++.+ .+++++. .++..+++ +|.-. | -++++||+++|+|+|+.... .....+ .. +.|+.+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 7888 8999854 48889998 66533 2 36899999999999987543 334444 42 67888765
Q ss_pred CCcCHHHHHHHHHHHhc-ChHHHHH
Q 017266 317 GIITRQEIYNRVKALLN-DDGIKAN 340 (374)
Q Consensus 317 ~~~~~~~l~~~i~~~l~-~~~~~~~ 340 (374)
-+.+++.++|.++++ |++.+++
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHH
Confidence 378999999999998 8874433
No 44
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.29 E-value=0.00047 Score=63.38 Aligned_cols=133 Identities=12% Similarity=0.049 Sum_probs=81.7
Q ss_pred EEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---HhhCCCCCCc
Q 017266 189 IYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE---KVLGHPSVAC 265 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~~~ 265 (374)
+++..|+.. +.+....+++++...+.++++ +|... ....+ +.+.++..+++.+.+|+++. .+++.+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~---~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAW---EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCC---CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcc---cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 344557763 233455666666666777554 45431 00000 11222335788999999976 58888998
Q ss_pred EEe--c-----------cC-chhHHHHhhcCcccccccchhhhhhhHHHHHh--HhcceeEeecCCCCCcCHHHHHHHHH
Q 017266 266 FLS--H-----------CG-WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICD--AWKVGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 266 ~I~--H-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~g~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
+|. + -| -++++||+++|+|+|+.+.. .....+.+ . +.|+.+.. +.+++.++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~~------d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTDF------APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSCC------CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcCC------CHHHHHHHHH
Confidence 663 2 23 36899999999999987753 34444443 2 45665532 5788999999
Q ss_pred HHhcChHHHHHHHHHH
Q 017266 330 ALLNDDGIKANALKMK 345 (374)
Q Consensus 330 ~~l~~~~~~~~a~~l~ 345 (374)
++++ ++++++..
T Consensus 304 ~l~~----~~~~~~~~ 315 (342)
T 2iuy_A 304 GLPA----SDEVRRAA 315 (342)
T ss_dssp TSCC----HHHHHHHH
T ss_pred HHHH----HHHHHHHH
Confidence 9987 44554443
No 45
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.27 E-value=0.02 Score=58.88 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=56.9
Q ss_pred CCCcEEEeec----ChHHhh---C-CCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeE
Q 017266 243 SDRGKFVEWA----PQEKVL---G-HPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQ 310 (374)
Q Consensus 243 ~~~~~~~~~~----pq~~lL---~-~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~ 310 (374)
.+++.+.++. |+.++. . .+++ ||.- +--.+++||+++|+|+|+-. .......+.+. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEE
Confidence 4677887744 444443 3 5567 7743 23368999999999999853 33344445453 57888
Q ss_pred eecCCCCCcCHHHHHHHHHHHh----cChHHHHH
Q 017266 311 FFPDENGIITRQEIYNRVKALL----NDDGIKAN 340 (374)
Q Consensus 311 l~~~~~~~~~~~~l~~~i~~~l----~~~~~~~~ 340 (374)
++.. +.++++++|.+++ .|++.+++
T Consensus 712 v~p~-----D~e~LA~aI~~lL~~Ll~d~~~~~~ 740 (816)
T 3s28_A 712 IDPY-----HGDQAADTLADFFTKCKEDPSHWDE 740 (816)
T ss_dssp ECTT-----SHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred eCCC-----CHHHHHHHHHHHHHHhccCHHHHHH
Confidence 8763 6888999997766 77764443
No 46
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.20 E-value=0.0035 Score=59.08 Aligned_cols=84 Identities=15% Similarity=0.037 Sum_probs=61.7
Q ss_pred CCCcEEEeecC---h---HHhhCCCCCCcEEecc----CchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 243 SDRGKFVEWAP---Q---EKVLGHPSVACFLSHC----GWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 243 ~~~~~~~~~~p---q---~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
.+++.+.+|++ + ..+++.+++ +|.-. .-++++||+++|+|+|+.+. ..+...+.+. +.|+.+.
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46888888775 2 247888888 77654 34689999999999998764 2344555553 6788774
Q ss_pred cCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 313 PDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
+.+++.++|.++++|++.+++
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHH
Confidence 578899999999998874443
No 47
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.03 E-value=0.00071 Score=62.53 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=78.2
Q ss_pred CcEEEeecChHHh---hCCCCCCcEEeccC---------chhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 245 RGKFVEWAPQEKV---LGHPSVACFLSHCG---------WNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 245 ~~~~~~~~pq~~l---L~~~~~~~~I~HgG---------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
|+.+.+|+|..++ |+.++.+++.+-+. -+-+.|++++|+|+|+.+ ...++..+.+. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 7899999998774 54556644442222 235789999999999754 45677778885 9999884
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHH
Q 017266 313 PDENGIITRQEIYNRVKALLNDD--GIKANALKMKEMARKSLGEGGSSFRNFESFISQLK 370 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~ 370 (374)
+.+++.+++.++..+. ++++|+++.++.++. +--..+.+.+.+.++.
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQAI 338 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhc
Confidence 3577888888765332 388899999888876 5566677776666553
No 48
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.89 E-value=0.014 Score=54.75 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=56.4
Q ss_pred cEEEeecChHH---hhCCCCCCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcc-----------
Q 017266 246 GKFVEWAPQEK---VLGHPSVACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKV----------- 307 (374)
Q Consensus 246 ~~~~~~~pq~~---lL~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~----------- 307 (374)
+.+.+|+|+.+ +++.+++ +|.- |.-++++||+++|+|+|+.... .....+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccc
Confidence 55569998554 7888888 6642 2235899999999999986542 23333332 22
Q ss_pred -----ee--EeecCCCCCcCHHHHHHHHHHHhcChHHHHHHH
Q 017266 308 -----GS--QFFPDENGIITRQEIYNRVKALLNDDGIKANAL 342 (374)
Q Consensus 308 -----G~--~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 342 (374)
|+ .+.. -+.+++.++| ++++|++.+++..
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~ 363 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYG 363 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHH
Confidence 55 5554 3789999999 9999987554433
No 49
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.82 E-value=0.0023 Score=59.90 Aligned_cols=92 Identities=13% Similarity=0.214 Sum_probs=63.4
Q ss_pred CcEEEeecCh-HHhhCCCCCCcEEec-----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCC
Q 017266 245 RGKFVEWAPQ-EKVLGHPSVACFLSH-----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGI 318 (374)
Q Consensus 245 ~~~~~~~~pq-~~lL~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 318 (374)
++.+.++..+ ..+++.+++ ++.- +|..+++||+++|+|+|.-|...+.......+.+. |.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 4555555443 358888887 6542 23478999999999999866655555555544443 665544
Q ss_pred cCHHHHHHHHHHHhcChH----HHHHHHHHHHH
Q 017266 319 ITRQEIYNRVKALLNDDG----IKANALKMKEM 347 (374)
Q Consensus 319 ~~~~~l~~~i~~~l~~~~----~~~~a~~l~~~ 347 (374)
-+.++|.++|.++++| + +.+++++..+.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 2678999999999988 6 67777666555
No 50
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.29 E-value=0.032 Score=53.58 Aligned_cols=138 Identities=11% Similarity=0.040 Sum_probs=79.1
Q ss_pred eEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcE-EEeecChH---HhhCCCC
Q 017266 188 VIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGK-FVEWAPQE---KVLGHPS 262 (374)
Q Consensus 188 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pq~---~lL~~~~ 262 (374)
.+++..|+... -..+.+-+.+..+.+.+.+++++ |... ......+ ..+..+.++++. +.++ +.. .+++.++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~-~~~~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ad 367 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD-VALEGAL-LAAASRHHGRVGVAIGY-NEPLSHLMQAGCD 367 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC-HHHHHHH-HHHHHHTTTTEEEEESC-CHHHHHHHHHHCS
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc-hHHHHHH-HHHHHhCCCcEEEecCC-CHHHHHHHHhcCC
Confidence 46667788743 22333333333343345665544 4320 0000000 111122346776 5677 433 4788889
Q ss_pred CCcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHh---------cceeEeecCCCCCcCHHHHHHHHH
Q 017266 263 VACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAW---------KVGSQFFPDENGIITRQEIYNRVK 329 (374)
Q Consensus 263 ~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~G~~l~~~~~~~~~~~~l~~~i~ 329 (374)
+ ||.- |--++++||+++|+|+|+.... .....+.+ - +.|+.+.. -+.+++.++|.
T Consensus 368 v--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~ 435 (485)
T 1rzu_A 368 A--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQAIR 435 (485)
T ss_dssp E--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHHHHH
T ss_pred E--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCcceEeCC-----CCHHHHHHHHH
Confidence 8 7743 3346899999999999987642 23333332 1 47887764 36899999999
Q ss_pred HHh---cChHHHHHH
Q 017266 330 ALL---NDDGIKANA 341 (374)
Q Consensus 330 ~~l---~~~~~~~~a 341 (374)
+++ +|++.+++.
T Consensus 436 ~ll~~~~~~~~~~~~ 450 (485)
T 1rzu_A 436 RTVRYYHDPKLWTQM 450 (485)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHhCCHHHHHHH
Confidence 999 787655443
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.22 E-value=0.034 Score=53.39 Aligned_cols=140 Identities=10% Similarity=0.022 Sum_probs=78.4
Q ss_pred eEEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcE-EEeecChH--HhhCCCCC
Q 017266 188 VIYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGK-FVEWAPQE--KVLGHPSV 263 (374)
Q Consensus 188 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pq~--~lL~~~~~ 263 (374)
.+++..|.... -..+.+-+.+..+.+.+.+++++-..+. .....+ ..+..+.++++. +.++.... .+++.+++
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP--VLQEGF-LAAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH--HHHHHH-HHHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch--HHHHHH-HHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 45566677632 2233333333334334566554432210 000000 111122346775 56773332 57888898
Q ss_pred CcEEec----cCchhHHHHhhcCcccccccchhhhhhhHHHHHhHh---------cceeEeecCCCCCcCHHHHHHHHHH
Q 017266 264 ACFLSH----CGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAW---------KVGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 264 ~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
||.- |.-++++||+++|+|+|+.... .....+.+ - +.|+.+.. -+.+++.++|.+
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~~i~~ 437 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVASGFVFED-----SNAWSLLRAIRR 437 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-CccccccccccceEEECC-----CCHHHHHHHHHH
Confidence 7643 2346889999999999987542 23333332 1 37887765 378999999999
Q ss_pred Hh---cChHHHHHHH
Q 017266 331 LL---NDDGIKANAL 342 (374)
Q Consensus 331 ~l---~~~~~~~~a~ 342 (374)
++ +|++.+++..
T Consensus 438 ll~~~~~~~~~~~~~ 452 (485)
T 2qzs_A 438 AFVLWSRPSLWRFVQ 452 (485)
T ss_dssp HHHHHTSHHHHHHHH
T ss_pred HHHHcCCHHHHHHHH
Confidence 99 6776554433
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.22 E-value=0.022 Score=53.91 Aligned_cols=85 Identities=11% Similarity=-0.016 Sum_probs=57.8
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEecc---Cc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLSHC---GW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE 315 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 315 (374)
.+++.+.+++|+.+ +++.+++ ||.-. |. +.++||+++|+|+|+ -..+ ....+.+. ..|+.+..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 35678889998664 7888998 76422 33 568999999999997 2221 12233332 46887765
Q ss_pred CCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 316 NGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 316 ~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
-+.++++++|.++++|++.+++
T Consensus 364 ---~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHTC----
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHH
Confidence 3789999999999988876655
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.86 E-value=0.1 Score=49.07 Aligned_cols=76 Identities=9% Similarity=0.093 Sum_probs=58.1
Q ss_pred CCCcEEEeecChHH---hhCCCCCCcEEe---ccCc-hhHHHHh-------hcCcccccccchhhhhhhHHHHHhHhcce
Q 017266 243 SDRGKFVEWAPQEK---VLGHPSVACFLS---HCGW-NSSIEGL-------SMGVPFLCWPYFVDQYQNRNYICDAWKVG 308 (374)
Q Consensus 243 ~~~~~~~~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 308 (374)
.+++.+.+++|+.+ +++.+++ ||. +-|. ++++||+ ++|+|+|+-.. +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 57789999998654 7888998 664 2343 6789999 99999998754 4442 568
Q ss_pred eE-eecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 309 SQ-FFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 309 ~~-l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
+. +... +.+++.++|.++++|++
T Consensus 331 ~l~v~~~-----d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTPG-----NADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECTT-----CHHHHHHHHHHHHHCCC
T ss_pred EEEeCCC-----CHHHHHHHHHHHHhCcc
Confidence 77 6553 78999999999998775
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.37 E-value=0.37 Score=47.10 Aligned_cols=135 Identities=10% Similarity=0.084 Sum_probs=72.6
Q ss_pred EEEeeccccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChH---HhhCCCCCC
Q 017266 189 IYVAFGSAAV-LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQE---KVLGHPSVA 264 (374)
Q Consensus 189 v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~lL~~~~~~ 264 (374)
+++..|.... -..+.+-+.+..+.+.+.+++++...+. .....-.......+.++.+....+.. .+++.+++
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 4455676632 2334444444444445666655433220 00000011223346777887776654 37788888
Q ss_pred cEEecc---Cc-hhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC-CC-C---cCHHHHHHHHHHHhc
Q 017266 265 CFLSHC---GW-NSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE-NG-I---ITRQEIYNRVKALLN 333 (374)
Q Consensus 265 ~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-~~-~---~~~~~l~~~i~~~l~ 333 (374)
||.-. |. .+++||+++|+|+|+-... .....|.+. ..|....... ++ . -+.+.+.++|+++++
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 77532 22 5899999999999986542 233334442 4565443321 11 1 246788999988764
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=86.90 E-value=0.81 Score=41.96 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=58.4
Q ss_pred CCceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEE-Eeec--C-hHHh
Q 017266 185 IGSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKF-VEWA--P-QEKV 257 (374)
Q Consensus 185 ~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--p-q~~l 257 (374)
++++|.+..||. ...+.+.+.++++.|.+.+.++++ ++.+. ....-+.+.+..+.+... .+-. . ...+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~----e~~~~~~i~~~~~~~~~~l~g~~sl~e~~al 258 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM----DLEMVQPVVEQMETKPIVATGKFQLGPLAAA 258 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT----THHHHHHHHHTCSSCCEECTTCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc----hHHHHHHHHHhcccccEEeeCCCCHHHHHHH
Confidence 456888888875 457789999999998776888776 44331 111111222222333222 2222 2 3348
Q ss_pred hCCCCCCcEEec-cCchhHHHHhhcCcccccc
Q 017266 258 LGHPSVACFLSH-CGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 258 L~~~~~~~~I~H-gG~~s~~eal~~GvP~l~~ 288 (374)
++++++ +|+. .|..-+ |.+.|+|+|++
T Consensus 259 i~~a~~--~i~~DsG~~Hl--Aaa~g~P~v~l 286 (349)
T 3tov_A 259 MNRCNL--LITNDSGPMHV--GISQGVPIVAL 286 (349)
T ss_dssp HHTCSE--EEEESSHHHHH--HHTTTCCEEEE
T ss_pred HHhCCE--EEECCCCHHHH--HHhcCCCEEEE
Confidence 899999 9998 443333 77899999985
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=84.10 E-value=0.66 Score=41.84 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=76.1
Q ss_pred CceEEEeeccc---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEee--cCh-HHhhC
Q 017266 186 GSVIYVAFGSA---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEW--APQ-EKVLG 259 (374)
Q Consensus 186 ~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pq-~~lL~ 259 (374)
++.|.+..||. ...+.+.+.++++.|.+.+.+++...+... +...-+.+.+..+ ++.+.+- +.+ ..+++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~ 252 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----EEERAKRLAEGFA-YVEVLPKMSLEGVARVLA 252 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----HHHHHHHHHTTCT-TEEECCCCCHHHHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----HHHHHHHHHhhCC-cccccCCCCHHHHHHHHH
Confidence 45788878875 457888999999998777777766544320 1101111111112 2333332 223 34899
Q ss_pred CCCCCcEEec-cCchhHHHHhhcCcccccc--cchhhhhhhHHHHHhHhcce-eEeec--CCCCCcCHHHHHHHHHHHhc
Q 017266 260 HPSVACFLSH-CGWNSSIEGLSMGVPFLCW--PYFVDQYQNRNYICDAWKVG-SQFFP--DENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 260 ~~~~~~~I~H-gG~~s~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~g~G-~~l~~--~~~~~~~~~~l~~~i~~~l~ 333 (374)
++++ +|+. .|..-+ |.+.|+|+|++ |...... .- +|-. ..+.. ..-..++.+++.++++++++
T Consensus 253 ~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~------~P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 253 GAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPGLI------GG-YGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp TCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHHHH------CC-CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred hCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChhhc------CC-CCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 9999 9999 544444 55689999988 4321111 11 1211 12211 11113899999999999987
Q ss_pred ChH
Q 017266 334 DDG 336 (374)
Q Consensus 334 ~~~ 336 (374)
+.+
T Consensus 322 ~~~ 324 (326)
T 2gt1_A 322 KAA 324 (326)
T ss_dssp TC-
T ss_pred Hhc
Confidence 543
No 57
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=83.25 E-value=6.4 Score=37.69 Aligned_cols=106 Identities=16% Similarity=0.067 Sum_probs=64.5
Q ss_pred cEE-EeecChHH---hhCCCCCCcEEe---ccCc-hhHHHHhhcCc-----ccccccchhhhhhhHHHHHhHhcceeEee
Q 017266 246 GKF-VEWAPQEK---VLGHPSVACFLS---HCGW-NSSIEGLSMGV-----PFLCWPYFVDQYQNRNYICDAWKVGSQFF 312 (374)
Q Consensus 246 ~~~-~~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~g~G~~l~ 312 (374)
+.+ .+++++.+ +++.+++ ||. +=|+ .++.||+++|+ |+|+--..+ .+.. +..|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~----l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANE----LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGT----CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHH----hCCeEEEC
Confidence 443 47777665 6788888 664 3355 47889999998 565543222 1111 12466776
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCh-H-HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 313 PDENGIITRQEIYNRVKALLNDD-G-IKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 313 ~~~~~~~~~~~l~~~i~~~l~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
. -+.++++++|.++++++ + .++..++..+.+++ -+...-...+++.+.+
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 5 36899999999999854 3 34444444444433 1445555566666554
No 58
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=79.83 E-value=11 Score=37.62 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=32.3
Q ss_pred CCcEEE---eecChH---------HhhCCCCCCcEEecc---Cc-hhHHHHhhcCcccccccc
Q 017266 244 DRGKFV---EWAPQE---------KVLGHPSVACFLSHC---GW-NSSIEGLSMGVPFLCWPY 290 (374)
Q Consensus 244 ~~~~~~---~~~pq~---------~lL~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~ 290 (374)
+++.++ .|++.. .+++.+++ ||.-. |+ .+.+||+++|+|+|+--.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 445543 677663 47888888 77543 33 589999999999998654
No 59
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=79.46 E-value=1.5 Score=39.63 Aligned_cols=96 Identities=8% Similarity=-0.003 Sum_probs=57.7
Q ss_pred CCceEEEeecc-c---ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcC----CCcEE-EeecC--
Q 017266 185 IGSVIYVAFGS-A---AVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVS----DRGKF-VEWAP-- 253 (374)
Q Consensus 185 ~~~vv~vs~GS-~---~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~p-- 253 (374)
++++|.+..|| . ...+.+.+.++++.|.+.+.++++. +.+. ....-+.+.+..+ .++.. .+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~----e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK----DHEAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG----GHHHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh----hHHHHHHHHHhhhhccccceEeccCcCCHH
Confidence 44588888888 3 3577889999999997778887764 3321 1100011111111 12221 22222
Q ss_pred h-HHhhCCCCCCcEEeccCchhHHHHhhcCcccccc
Q 017266 254 Q-EKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCW 288 (374)
Q Consensus 254 q-~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 288 (374)
+ ..+++++++ +|+.- .|.+.-|.+.|+|+|++
T Consensus 254 e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 254 QAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 358999999 99973 34455588899999875
No 60
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=78.76 E-value=13 Score=30.25 Aligned_cols=133 Identities=12% Similarity=0.035 Sum_probs=65.5
Q ss_pred cchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecCh
Q 017266 175 TCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQ 254 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq 254 (374)
++-.+|.+.. ..+||.|.... .+....++..+.+-+++-+++.. ..+.+... -+...+++.+++
T Consensus 36 ~lg~~La~~g---~~lVsGGg~~G----im~aa~~gAl~~gG~tigVlP~~-----~~~~~~~~----~~~~i~~~~~~~ 99 (176)
T 2iz6_A 36 ELGKQIATHG---WILLTGGRSLG----VMHEAMKGAKEAGGTTIGVLPGP-----DTSEISDA----VDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHHTT---CEEEEECSSSS----HHHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECCCCSS
T ss_pred HHHHHHHHCC---CEEEECCCccC----HhHHHHHHHHHcCCEEEEEeCch-----hhhhhccC----CceeEEcCCHHH
Confidence 3445565543 56667766221 23445555545565666665422 11111111 112234466665
Q ss_pred HH-hhCCCCCCcEEeccCchhHHH---HhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHH
Q 017266 255 EK-VLGHPSVACFLSHCGWNSSIE---GLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 255 ~~-lL~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
.. ++..-+-..++--||.||+.| ++.+++|++.+|.+. .....+.+. ........ -+.+++.+.+.+
T Consensus 100 Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~-----~~~~e~~~~l~~ 170 (176)
T 2iz6_A 100 RDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA-----ADVAGAIAAVKQ 170 (176)
T ss_dssp SCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE-----SSHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc-----CCHHHHHHHHHH
Confidence 43 333333345666788887665 567999999999832 111122221 22222222 267777777766
Q ss_pred Hh
Q 017266 331 LL 332 (374)
Q Consensus 331 ~l 332 (374)
.+
T Consensus 171 ~~ 172 (176)
T 2iz6_A 171 LL 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=76.97 E-value=10 Score=36.34 Aligned_cols=108 Identities=11% Similarity=0.044 Sum_probs=67.7
Q ss_pred CcEEEeecChHH---hhCCCCCCcEEe---ccCchh-HHHHhhcC---cccccccchhhhhhhHHHHHhHhcceeEeecC
Q 017266 245 RGKFVEWAPQEK---VLGHPSVACFLS---HCGWNS-SIEGLSMG---VPFLCWPYFVDQYQNRNYICDAWKVGSQFFPD 314 (374)
Q Consensus 245 ~~~~~~~~pq~~---lL~~~~~~~~I~---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 314 (374)
.+++...+|+.+ ++..+++ |+. +=|+|- ..|++++| .|+|+- +--..+..+. ..|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlS----e~aGa~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILS----ETCGAAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEE----TTBTTHHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEe----CCCCCHHHhC---CCEEEECC-
Confidence 566677777654 6777888 654 458875 58999996 444433 2222333221 25788877
Q ss_pred CCCCcCHHHHHHHHHHHhcChH--HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHH
Q 017266 315 ENGIITRQEIYNRVKALLNDDG--IKANALKMKEMARKSLGEGGSSFRNFESFISQLKA 371 (374)
Q Consensus 315 ~~~~~~~~~l~~~i~~~l~~~~--~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~~~ 371 (374)
-+.++++++|.++|+++. -+++.+++.+.+++ -....=.+.+++.|..
T Consensus 423 ----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 478999999999997653 55555555555443 2445556666666653
No 62
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=68.40 E-value=6.7 Score=30.27 Aligned_cols=33 Identities=12% Similarity=0.223 Sum_probs=25.3
Q ss_pred cccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccch
Q 017266 24 QISCVITDVTVG--WALEIAEQM-------GIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 56 (374)
+||+||.|..+| -|..+++.+ ++|++.++....
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 399999999987 677777765 488888765543
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=66.02 E-value=4.1 Score=31.05 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=25.7
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh---CCCeEEEe
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM---GIARAAVV 52 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l---giP~v~~~ 52 (374)
++.++.+.. .+||+||.|..++ -|..+++.+ ++|+|.++
T Consensus 43 ~eAl~~~~~----~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 43 QEALDIARK----GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHH----CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHh----CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 444555544 3499999999976 555665544 78876643
No 64
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=61.54 E-value=13 Score=27.33 Aligned_cols=43 Identities=7% Similarity=0.106 Sum_probs=28.1
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 56 (374)
++.++.+.. .+||+||.|...+ -+..+.+.+ ++|++.++....
T Consensus 36 ~~al~~l~~----~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 36 QIALEKLSE----FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HHHHHHHTT----BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHHHHHHHh----cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 344455543 3499999999875 566666654 578888765543
No 65
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=58.58 E-value=8.7 Score=31.84 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=36.1
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEeccchh
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
...++.++++++++ +|+||-|.. +..+|+++|+|.+.+.++...
T Consensus 129 ~e~~~~i~~l~~~G----~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKTEN----IKIVVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHHTT----CCEEEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHCC----CeEEECCHH---HHHHHHHcCCcEEEEecCHHH
Confidence 45678899999888 999999874 578899999999998765444
No 66
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=58.33 E-value=13 Score=31.60 Aligned_cols=29 Identities=7% Similarity=0.028 Sum_probs=23.9
Q ss_pred CCCCcEEeccCchhHHHHhhcCcccccccchh
Q 017266 261 PSVACFLSHCGWNSSIEGLSMGVPFLCWPYFV 292 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 292 (374)
+++ +|++||....+... .++|+|-+|..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 455 99999999888875 589999999843
No 67
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=55.02 E-value=12 Score=31.94 Aligned_cols=41 Identities=12% Similarity=0.124 Sum_probs=29.5
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCch-------hHHHHHHHHhCCCeEEEe
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTV-------GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~-------~~~~~~A~~lgiP~v~~~ 52 (374)
|.+-++++++. .+||+|++|..- .-|..+.-.+|+|+|...
T Consensus 95 P~ll~al~~L~-----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 95 PTVLAALDALP-----CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHTSS-----SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHhcC-----CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 44555666664 569999999872 355567788899999864
No 68
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=52.68 E-value=21 Score=26.73 Aligned_cols=42 Identities=10% Similarity=0.161 Sum_probs=26.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
++.++.+... +||+||.|..++ -+..+.+.+ ++|++.++...
T Consensus 38 ~~al~~~~~~----~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYKN----LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHHS----CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHhC----CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 3444555443 499999999865 455555443 57888776554
No 69
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=52.34 E-value=8.9 Score=33.26 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=25.6
Q ss_pred CcccEEE-eCCch-hHHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCVI-TDVTV-GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI-~D~~~-~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..||+|| +|+.. ..+..=|.++|||+|++.-+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 4588874 67765 3777789999999999865544
No 70
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=51.15 E-value=26 Score=25.40 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=27.3
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh----CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM----GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 56 (374)
++.++.+.. .+||+||.|...+ -+..+.+.+ ++|.+.++....
T Consensus 36 ~~al~~~~~----~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 36 NEAVEMVEE----LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHHHHT----TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHHHHhh----CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 344555543 3499999999875 455555443 678877765443
No 71
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=51.12 E-value=9 Score=31.76 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=24.9
Q ss_pred CCCCcEEeccCchhHHHHhhcCcccccccchh
Q 017266 261 PSVACFLSHCGWNSSIEGLSMGVPFLCWPYFV 292 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 292 (374)
....++|++||....+... .++|+|-+|..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3444599999998888875 589999999864
No 72
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=49.19 E-value=16 Score=31.40 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=29.5
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCch-------hHHHHHHHHhCCCeEEEe
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTV-------GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~-------~~~~~~A~~lgiP~v~~~ 52 (374)
|.+-++++++. .+||+|++|..- .-|..+.-.+|+|+|...
T Consensus 97 P~ll~al~~L~-----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 97 PLIIEAAKKLE-----TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHCS-----SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 45556666665 459999999862 345567778899999864
No 73
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=48.62 E-value=20 Score=27.16 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=26.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh---------CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM---------GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l---------giP~v~~~~~~ 55 (374)
++.++.+... +||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 48 ~~al~~~~~~----~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 48 EQVLDAMAEE----DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp HHHHHHHHHS----CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred HHHHHHHhcC----CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 3445555443 499999999865 456665554 27888776543
No 74
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=48.36 E-value=18 Score=30.74 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=34.5
Q ss_pred hHHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 6 PGCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 6 ~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
....++.++++++++ +|+||-|.. ...+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~G----~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKANG----TEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHTT----CCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHCC----CCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 456788899999888 999999874 47889999999998773
No 75
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=48.10 E-value=1.1e+02 Score=24.78 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=76.5
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCc
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVAC 265 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~ 265 (374)
+|.|-|-+||.. +...+++..+.|++.+..+-..+-. ....|+.+. +|. .-.....+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~S------AHRtp~~l~----------~~~---~~a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS------AHRTPDYMF----------EYA---ETARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTSHHHHH----------HHH---HHTTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEc------cccChHHHH----------HHH---HHHHhcCceE
Confidence 357888889875 3567888888898888775443332 123444331 111 1111223444
Q ss_pred EEeccCchhHHHHh---hcCcccccccchhh---hhhhHHHHHhHhcceeEeecCCC---CCcCHHHHHHHHHHHhcChH
Q 017266 266 FLSHCGWNSSIEGL---SMGVPFLCWPYFVD---QYQNRNYICDAWKVGSQFFPDEN---GIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 266 ~I~HgG~~s~~eal---~~GvP~l~~P~~~D---Q~~na~~v~~~~g~G~~l~~~~~---~~~~~~~l~~~i~~~l~~~~ 336 (374)
+|.=+|.-.-+-.+ ..-+|+|++|.... -.+..-.+.+ +=.|+-+-.-.- +-.++.-++..|- -+.|++
T Consensus 81 iIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qIL-a~~d~~ 158 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHDD 158 (181)
T ss_dssp EEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHH-TTTCHH
T ss_pred EEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHH-ccCCHH
Confidence 77777654333222 34579999998543 2223334444 233443322110 0012222333222 236788
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 017266 337 IKANALKMKEMARKSLGE 354 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~ 354 (374)
++++.+..++..++.+.+
T Consensus 159 l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 159 IHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888888877765443
No 76
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=48.05 E-value=14 Score=31.24 Aligned_cols=30 Identities=17% Similarity=0.034 Sum_probs=22.2
Q ss_pred CcccEEEeCCchh-------HHHHHHHHhCCCeEEEe
Q 017266 23 EQISCVITDVTVG-------WALEIAEQMGIARAAVV 52 (374)
Q Consensus 23 ~~~D~iI~D~~~~-------~~~~~A~~lgiP~v~~~ 52 (374)
.+||+|++|.... -|..+...+|+|+|.+.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 5699999999743 34446666799999864
No 77
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=44.67 E-value=34 Score=28.07 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=40.4
Q ss_pred HHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcC-h------HHHHHHHHHHHHHHH----hhccCCChHHHHHHHHHH
Q 017266 300 YICDAWKVGSQFFPDENGIITRQEIYNRVKALLND-D------GIKANALKMKEMARK----SLGEGGSSFRNFESFISQ 368 (374)
Q Consensus 300 ~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~-~------~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~v~~ 368 (374)
.-++ -|+|+. +|++++.++|.++++. . +|+ +...+-..+|+ -|.++..-...+++-+-+
T Consensus 107 Fe~~-cGVGV~--------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~ 176 (187)
T 3tl4_X 107 MNEN-SGVGIE--------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLK 176 (187)
T ss_dssp HHHT-TTTTCC--------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHH
T ss_pred HHHH-CCCCeE--------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence 3344 488877 5899999999999853 2 267 77777777775 255665556666655544
Q ss_pred H
Q 017266 369 L 369 (374)
Q Consensus 369 ~ 369 (374)
+
T Consensus 177 l 177 (187)
T 3tl4_X 177 L 177 (187)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=43.01 E-value=1.3e+02 Score=24.33 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=76.4
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcE
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACF 266 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ 266 (374)
|.|-|-+||.. +....++....|+..+.++-..+-. ....|+.+.+ |..+ .....+++|
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~~----------~~~~---a~~~g~~Vi 72 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS------AHRTPDRMFE----------YAKN---AEERGIEVI 72 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC------TTTCHHHHHH----------HHHH---TTTTTCCEE
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 47778888865 4567788888888888775333321 1234443311 1100 111123347
Q ss_pred EeccCch----hHHHHhhcCcccccccchhh--hhhhH-HHHHhHh--cceeEee-cCCCCCcCHHHHHHHHHHHhcChH
Q 017266 267 LSHCGWN----SSIEGLSMGVPFLCWPYFVD--QYQNR-NYICDAW--KVGSQFF-PDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 267 I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~~~--g~G~~l~-~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
|.=+|.. ++..++ .-+|+|.+|.... .-.++ -.+.+ + |+.+..- .+ +..++.-++..|. -+.|++
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id--~~~nAa~lAaqIl-a~~d~~ 147 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAIN--NAKNAGILAASIL-GIKYPE 147 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTT--CHHHHHHHHHHHH-HTTCHH
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecC--CchHHHHHHHHHH-hcCCHH
Confidence 7777654 333333 4679999998542 22232 22333 3 4333221 11 1245555555554 346888
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 017266 337 IKANALKMKEMARKSLGE 354 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~ 354 (374)
++++.+..+...+..+.+
T Consensus 148 l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 148 IARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888877775443
No 79
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=41.41 E-value=42 Score=24.29 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=26.3
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+.. .+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 37 ~~~~~~~~~----~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPD----VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGG----CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhc----CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 344444443 3499999998765 455555444 57888776544
No 80
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=41.31 E-value=39 Score=25.06 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=21.6
Q ss_pred cccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
+||+||.|...+ -+..+.+.+ .+|++.++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 399999998765 455555444 57888776543
No 81
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=39.79 E-value=44 Score=23.81 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=26.3
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
++.++.+.... ||+||.|...+ .+..+.+.+ ++|.+.++....
T Consensus 37 ~~a~~~~~~~~----~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 37 REAVEKYKELK----PDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HHHHHHHHHHC----CSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred HHHHHHHHhcC----CCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 34444444333 99999998765 455555443 578777765543
No 82
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=38.91 E-value=58 Score=22.96 Aligned_cols=41 Identities=15% Similarity=0.255 Sum_probs=24.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|.+.++..
T Consensus 35 ~~a~~~~~~~----~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 35 EEALKKFFSG----NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHHS----CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHhcC----CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 3344444433 399999998764 445544443 5777776654
No 83
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=38.77 E-value=50 Score=23.42 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=21.6
Q ss_pred ccEEEeCCchh--HHHHHHHH----hCCCeEEEeccch
Q 017266 25 ISCVITDVTVG--WALEIAEQ----MGIARAAVVTFAP 56 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 56 (374)
||+||.|...+ .+..+.+. -.+|.+.++....
T Consensus 46 ~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 46 PDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 99999998764 34444443 3688888765543
No 84
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=38.69 E-value=36 Score=30.87 Aligned_cols=26 Identities=23% Similarity=0.454 Sum_probs=20.6
Q ss_pred CCCCCcEEeccCchhH---HHHhhcCccccc
Q 017266 260 HPSVACFLSHCGWNSS---IEGLSMGVPFLC 287 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~ 287 (374)
.|++ +|++||.-+. +.|...|+|.++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5777 9999998764 556778999985
No 85
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=38.44 E-value=35 Score=30.78 Aligned_cols=74 Identities=7% Similarity=0.128 Sum_probs=54.0
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHH
Q 017266 198 VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIE 277 (374)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~e 277 (374)
..+.+..+.+.+++.....+.||...... +-.++.++++...+-++|+. |+-+.-...++-
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGY-----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 34567788899999888888898887651 12245566666666677877 999988888888
Q ss_pred Hhh--cCcccccccc
Q 017266 278 GLS--MGVPFLCWPY 290 (374)
Q Consensus 278 al~--~GvP~l~~P~ 290 (374)
+++ .|++.+.=|+
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 887 4887766665
No 86
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=37.85 E-value=44 Score=24.55 Aligned_cols=43 Identities=26% Similarity=0.346 Sum_probs=26.2
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
.+.++.+.... ||+||.|...+ -+..+.+.+ ++|.+.++....
T Consensus 39 ~~al~~~~~~~----~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (133)
T 3b2n_A 39 LDAMKLIEEYN----PNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKR 88 (133)
T ss_dssp HHHHHHHHHHC----CSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHhhcC----CCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCC
Confidence 34444444333 99999998765 455555443 577777765543
No 87
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=37.59 E-value=62 Score=23.51 Aligned_cols=41 Identities=15% Similarity=0.168 Sum_probs=24.9
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 54 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 37 ~~a~~~l~~~----~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 37 ASGLQQALAH----PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHHHHS----CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHHHHhcC----CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 4455555543 399999998754 344443322 6787776654
No 88
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=37.58 E-value=42 Score=25.57 Aligned_cols=42 Identities=10% Similarity=0.138 Sum_probs=26.1
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
++.++.+.. .+||+||.|...+ .+..+++.+ ++|+|.++...
T Consensus 41 ~~al~~l~~----~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 41 REAVRFLSL----TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHTT----CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHh----CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 444555543 3499999998754 445544433 57888776543
No 89
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=37.29 E-value=53 Score=24.28 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=25.4
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.+.++.+.. .+||+||.|. .+ .+..+.+.+ ++|++.++...
T Consensus 38 ~~a~~~l~~----~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 38 QEAFTFLRR----EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHTT----SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHhc----cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 444555544 3499999998 64 344444433 58888876554
No 90
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=36.62 E-value=1.1e+02 Score=24.69 Aligned_cols=111 Identities=10% Similarity=0.078 Sum_probs=60.2
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEE---EeecChHHhhCCCCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKF---VEWAPQEKVLGHPSVA 264 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~pq~~lL~~~~~~ 264 (374)
+++...||.... ...++++.|.+.+.++-.+.... ...-+.....+...+.++. ..|+++..+-..+++
T Consensus 8 IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~- 79 (175)
T 3qjg_A 8 VLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTN----GRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK- 79 (175)
T ss_dssp EEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTG----GGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE-
T ss_pred EEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcC----HHHHhhHHHHHHhcCCEEecCCCCccccccccchhCE-
Confidence 666666766443 24556777877787765555543 1111111111222232111 134556665555554
Q ss_pred cEEeccCchhHHH-------------HhhcCcccccccchh-------hhhhhHHHHHhHhcc
Q 017266 265 CFLSHCGWNSSIE-------------GLSMGVPFLCWPYFV-------DQYQNRNYICDAWKV 307 (374)
Q Consensus 265 ~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~-------DQ~~na~~v~~~~g~ 307 (374)
.+|.-|-+||+.. ++..++|+++.|-.. =...|...+.+ +|+
T Consensus 80 ~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~ 141 (175)
T 3qjg_A 80 IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGV 141 (175)
T ss_dssp EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTC
T ss_pred EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCC
Confidence 5777777776543 356689999999422 22457777776 465
No 91
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=36.16 E-value=46 Score=23.95 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=21.0
Q ss_pred ccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 25 ISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 48 ~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 48 PDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 99999998764 345544443 57887776544
No 92
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=35.94 E-value=52 Score=24.34 Aligned_cols=42 Identities=2% Similarity=0.101 Sum_probs=26.4
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 55 (374)
.+.++.+... +||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 38 ~~al~~~~~~----~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 38 EEAIGKIFSN----KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHHHHHC----CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHHhc----CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 3444444433 499999998765 455555544 57887776544
No 93
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=35.91 E-value=51 Score=23.92 Aligned_cols=43 Identities=12% Similarity=0.119 Sum_probs=24.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
++.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 41 ~~a~~~l~~----~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 41 VDALELLGG----FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp HHHHHHHTT----CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred HHHHHHHhc----CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 344444443 4499999998754 334444333 578888765543
No 94
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=35.72 E-value=1.6e+02 Score=23.24 Aligned_cols=138 Identities=11% Similarity=0.113 Sum_probs=72.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEE
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFL 267 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I 267 (374)
.|-|-+||.+ +....++....|++.+.++-..+-. ....|+.+. +|..+.. .....++||
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s------aHR~p~~~~----------~~~~~a~--~~~~~~ViI 63 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS------AHKTAEHVV----------SMLKEYE--ALDRPKLYI 63 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC------TTTCHHHHH----------HHHHHHH--TSCSCEEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc------ccCCHHHHH----------HHHHHhh--hcCCCcEEE
Confidence 5666777754 4566788888888888765433321 123444331 1111111 111234488
Q ss_pred eccCchhHHHHhh---cCcccccccchh---hhhhhHHHHHhHh--cceeEeecCCCCCcCHHHHHHHHHHHhcChHHHH
Q 017266 268 SHCGWNSSIEGLS---MGVPFLCWPYFV---DQYQNRNYICDAW--KVGSQFFPDENGIITRQEIYNRVKALLNDDGIKA 339 (374)
Q Consensus 268 ~HgG~~s~~eal~---~GvP~l~~P~~~---DQ~~na~~v~~~~--g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 339 (374)
.=+|...-+-.+. .-+|+|.+|... +-.. .-.+.+ + |+.+.-- ++..++.-++..|. -+.|+++++
T Consensus 64 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv---~~~~nAa~lA~~Il-~~~d~~l~~ 137 (159)
T 3rg8_A 64 TIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV---LEPKNAALLAARIF-SLYDKEIAD 137 (159)
T ss_dssp EECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC---CSHHHHHHHHHHHH-TTTCHHHHH
T ss_pred EECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe---cCchHHHHHHHHHH-hCCCHHHHH
Confidence 8888654333333 457999999642 1111 222233 2 4433221 11245555554443 236888888
Q ss_pred HHHHHHHHHHHh
Q 017266 340 NALKMKEMARKS 351 (374)
Q Consensus 340 ~a~~l~~~~~~~ 351 (374)
+.+..++..++.
T Consensus 138 kl~~~r~~~~~~ 149 (159)
T 3rg8_A 138 SVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888776653
No 95
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=35.42 E-value=54 Score=24.18 Aligned_cols=41 Identities=15% Similarity=0.201 Sum_probs=25.0
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 54 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 40 ~~a~~~l~~~----~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 40 AQALEQVARR----PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHHS----CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHhC----CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 4445555543 499999998764 455544433 5677776544
No 96
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=34.89 E-value=80 Score=26.37 Aligned_cols=44 Identities=20% Similarity=0.055 Sum_probs=28.5
Q ss_pred EEEeecChHH-hhCCCCCCcEEeccCchhHHHHhh---------cCcccccccc
Q 017266 247 KFVEWAPQEK-VLGHPSVACFLSHCGWNSSIEGLS---------MGVPFLCWPY 290 (374)
Q Consensus 247 ~~~~~~pq~~-lL~~~~~~~~I~HgG~~s~~eal~---------~GvP~l~~P~ 290 (374)
.+...+++.. ++..-+-..++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 4455666443 443333345777899999988762 4899988764
No 97
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=34.86 E-value=77 Score=23.15 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=28.7
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPD 225 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~ 225 (374)
-|+|.|.| +++.+++++..+.+.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777755 68899999999999999999998765
No 98
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.84 E-value=55 Score=24.61 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=27.2
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
.++.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 55 ~~~al~~l~~----~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 55 GQEAIQLLEK----ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHHTT----SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHhhc----cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 3455555544 3499999998754 455554433 578777765543
No 99
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=34.61 E-value=68 Score=23.53 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=21.1
Q ss_pred cccEEEeCCchh--HHHHHHHHh------CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM------GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l------giP~v~~~~~~ 55 (374)
+||+||.|..++ -+..+++.+ .+|++.++...
T Consensus 52 ~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~ 91 (133)
T 2r25_B 52 NYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFA 91 (133)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCC
Confidence 499999999875 455544433 46777765543
No 100
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=34.29 E-value=56 Score=24.18 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=21.7
Q ss_pred CcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 23 EQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4599999998754 344444433 57877766543
No 101
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=34.27 E-value=1.8e+02 Score=23.27 Aligned_cols=146 Identities=17% Similarity=0.183 Sum_probs=77.6
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcE
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACF 266 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ 266 (374)
|.|-|-+||.. +....++....|++.+.++-..+-. ....|+.+. +|..+ .....++.|
T Consensus 12 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~----------~~~~~---a~~~g~~Vi 70 (170)
T 1xmp_A 12 SLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS------AHRTPDYMF----------EYAET---ARERGLKVI 70 (170)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTSHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe------ccCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 46777778765 4567788888888888775433321 123343331 11100 111113348
Q ss_pred EeccCchhHHHHhhc---Ccccccccchhh--hhhhH-HHHHh--HhcceeEe-ecCCCCCcCHHHHHHHHHHHhcChHH
Q 017266 267 LSHCGWNSSIEGLSM---GVPFLCWPYFVD--QYQNR-NYICD--AWKVGSQF-FPDENGIITRQEIYNRVKALLNDDGI 337 (374)
Q Consensus 267 I~HgG~~s~~eal~~---GvP~l~~P~~~D--Q~~na-~~v~~--~~g~G~~l-~~~~~~~~~~~~l~~~i~~~l~~~~~ 337 (374)
|.=+|...-+-.+.+ -+|+|.+|.... .-..+ -.+.+ . |+.+.. ..++-+..++.-++..|. -+.|+++
T Consensus 71 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~~l 148 (170)
T 1xmp_A 71 IAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHDDI 148 (170)
T ss_dssp EEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCHHH
T ss_pred EEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCHHH
Confidence 887776544444333 569999998542 22222 22333 2 443221 221001134444554443 3478889
Q ss_pred HHHHHHHHHHHHHhhccC
Q 017266 338 KANALKMKEMARKSLGEG 355 (374)
Q Consensus 338 ~~~a~~l~~~~~~~~~~~ 355 (374)
+++.+.+++..++.+.+.
T Consensus 149 ~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 149 HDALELRREAIEKDVREG 166 (170)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999888765543
No 102
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=34.09 E-value=57 Score=23.96 Aligned_cols=43 Identities=7% Similarity=0.080 Sum_probs=26.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh---HHHHHHHH----hCCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG---WALEIAEQ----MGIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~---~~~~~A~~----lgiP~v~~~~~~~ 56 (374)
++.++.+.... ||+||.|...+ .+..+.+. -++|+|.++....
T Consensus 44 ~~a~~~~~~~~----~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 44 EEAVRCAPDLR----PDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHHHC----CSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHhCC----CCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 44455554433 99999997653 34444444 3789888765543
No 103
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=34.01 E-value=63 Score=23.60 Aligned_cols=42 Identities=12% Similarity=0.247 Sum_probs=25.2
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 37 ~~al~~~~~~----~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 37 GEGLAKIENE----FFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp HHHHHHHHHS----CCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred HHHHHHHhcC----CCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 3444444443 399999998764 344444433 57777766543
No 104
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=33.91 E-value=47 Score=28.34 Aligned_cols=46 Identities=11% Similarity=0.024 Sum_probs=32.7
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCch---------hHHHHHHHHhCCCeEEEeccchh
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTV---------GWALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~---------~~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
..+.+.++++. ..+|++|+|... ....++|+.++.|++.+......
T Consensus 119 ~~I~~~~~~l~-----~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~lg 173 (242)
T 3qxc_A 119 DNLTQRLHNFT-----KTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLG 173 (242)
T ss_dssp HHHHHHHHHGG-----GTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCSTT
T ss_pred HHHHHHHHHHH-----hcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCCCc
Confidence 44555555554 348999999742 24578999999999998776543
No 105
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=33.74 E-value=49 Score=25.01 Aligned_cols=43 Identities=7% Similarity=0.096 Sum_probs=26.2
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
..+.++.+... +||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 47 ~~~a~~~l~~~----~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 47 ATQALQLLASR----EVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHHS----CCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHcC----CCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 34455555543 499999998764 344444433 57877765543
No 106
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=33.66 E-value=68 Score=22.87 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=21.5
Q ss_pred cccEEEeCCchh--HHHHHHHHh----CCCeEEEeccch
Q 017266 24 QISCVITDVTVG--WALEIAEQM----GIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 56 (374)
+||+||.|...+ -+..+.+.+ ++|.+.++....
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 47 DINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 499999998764 344444443 677777665443
No 107
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=33.52 E-value=76 Score=22.46 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=21.6
Q ss_pred cccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccch
Q 017266 24 QISCVITDVTVG--WALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 56 (374)
+||++|.|...+ .+..+.+.+ .+|++.++....
T Consensus 44 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 44 IPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 499999998764 344444433 578887765543
No 108
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=33.18 E-value=76 Score=23.49 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=26.0
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
++.++.+.. .+||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 41 ~~a~~~l~~----~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 41 AKALYQVQQ----AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHHTT----CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHHhhc----CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 444555543 3499999999765 344444433 47888776543
No 109
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=33.00 E-value=61 Score=23.08 Aligned_cols=32 Identities=9% Similarity=0.200 Sum_probs=21.5
Q ss_pred cccEEEeCCchh--HHHHHHHHh----CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM----GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 55 (374)
+||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 499999998764 455555554 57777765544
No 110
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.63 E-value=53 Score=24.80 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=25.7
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.+.++.+.. .+||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 41 ~~a~~~l~~----~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKG----TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTT----SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhc----CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 344555543 3499999998754 344444433 67888776544
No 111
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=32.53 E-value=86 Score=27.42 Aligned_cols=48 Identities=23% Similarity=0.317 Sum_probs=38.4
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEeccch
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 56 (374)
....+.++++.+++.+ ..+|+++.... .+..+|+..|++.+.+.+.+.
T Consensus 222 s~~~l~~l~~~ik~~~----v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 222 SAQELKQLIDTAKENN----LTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp CHHHHHHHHHHHHTTT----CCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcC----CCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchh
Confidence 4567888888888766 89999998765 677799999999988766654
No 112
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=32.21 E-value=42 Score=26.60 Aligned_cols=33 Identities=12% Similarity=0.282 Sum_probs=22.0
Q ss_pred CcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 23 EQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.+||+||.|..++ -+..+++.+ ++|++.++...
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 4499999999865 344444433 57887776554
No 113
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=32.09 E-value=51 Score=24.58 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=24.6
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
.+.++.+.. .+||+||.|...+ .+..+++.+ ++|.+.++..
T Consensus 39 ~~al~~~~~----~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 39 INAIQIALK----HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp HHHHHHHTT----SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred HHHHHHHhc----CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 444554443 3499999998764 455555443 4676665443
No 114
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.04 E-value=64 Score=23.85 Aligned_cols=42 Identities=10% Similarity=0.161 Sum_probs=25.4
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+.... ||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 38 ~~a~~~l~~~~----~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 38 RDAIQFIERSK----PQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HHHHHHHHHHC----CSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHHHhcC----CCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 34444444433 99999998764 455555443 46777765543
No 115
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=32.02 E-value=53 Score=23.51 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=19.0
Q ss_pred ccEEEeCCchh--HHHHHHHHh-------CCCeEEEecc
Q 017266 25 ISCVITDVTVG--WALEIAEQM-------GIARAAVVTF 54 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 54 (374)
||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 46 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 46 PDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp CSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 99999998764 355554443 5677776543
No 116
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=31.91 E-value=2e+02 Score=23.22 Aligned_cols=146 Identities=13% Similarity=0.153 Sum_probs=78.3
Q ss_pred ceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcE
Q 017266 187 SVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACF 266 (374)
Q Consensus 187 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~ 266 (374)
+.|-|-+||.. +....++....|+..+.++-..+-. ....|+.+. +|..+ .....++.|
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~----------~~~~~---a~~~g~~Vi 80 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS------AHRTPDRLA----------DYART---AAERGLNVI 80 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 35777777764 4567788888888888775433321 123443331 11100 111113348
Q ss_pred EeccCch----hHHHHhhcCcccccccchhh--hhhhH-HHHHh--HhcceeE-eecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 267 LSHCGWN----SSIEGLSMGVPFLCWPYFVD--QYQNR-NYICD--AWKVGSQ-FFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 267 I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~--~~g~G~~-l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
|.=+|.. ++..++ .-+|+|.+|.... .-..+ -.+.+ . |+.+. +..++-+..++.-+...|. -+.|++
T Consensus 81 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~~ 157 (182)
T 1u11_A 81 IAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNPA 157 (182)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCHH
Confidence 8877754 344333 3679999998542 22222 22333 2 55432 2221001134444554443 347889
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 017266 337 IKANALKMKEMARKSLGEGG 356 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~~~~~g 356 (374)
++++.+..++..++.+.+..
T Consensus 158 l~~kL~~~r~~~~~~v~~~~ 177 (182)
T 1u11_A 158 LAARLETWRALQTASVPNSP 177 (182)
T ss_dssp HHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999998888765544
No 117
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=31.90 E-value=71 Score=23.36 Aligned_cols=42 Identities=12% Similarity=0.171 Sum_probs=25.6
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh-------HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG-------WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~-------~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 37 ~~a~~~l~~~----~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 37 VSLSTVLREE----NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHHS----CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHHcC----CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4445555543 399999998654 344444333 68888876543
No 118
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=31.68 E-value=1.2e+02 Score=24.73 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=70.0
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEe-e-----cChHHhhCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVE-W-----APQEKVLGHP 261 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~pq~~lL~~~ 261 (374)
+++...||..... ...+++.|.+.+..+-.+.... ...-+.....+...++ ...+ | +.+..+...+
T Consensus 11 IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~~~~l~~~-v~~~~~~~~~~~~hi~l~~~a 82 (194)
T 1p3y_1 11 LLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT----AEDLIPAHTVSYFCDH-VYSEHGENGKRHSHVEIGRWA 82 (194)
T ss_dssp EEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH----HHHHSCHHHHGGGSSE-EECTTCSSSCCCCHHHHHHHC
T ss_pred EEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHhcCC-EeccccccCCCcCcccccccC
Confidence 6666666664321 2455666666676664444422 0000111111223444 2222 2 3344444444
Q ss_pred CCCcEEeccCchhHHHH-------------hhcCcccccccchh----h---hhhhHHHHHhHhcceeEeecCC------
Q 017266 262 SVACFLSHCGWNSSIEG-------------LSMGVPFLCWPYFV----D---QYQNRNYICDAWKVGSQFFPDE------ 315 (374)
Q Consensus 262 ~~~~~I~HgG~~s~~ea-------------l~~GvP~l~~P~~~----D---Q~~na~~v~~~~g~G~~l~~~~------ 315 (374)
++ .+|.-|-+||+... +..++|+++.|-.. . ...|...+.+ +|+=+.-....
T Consensus 83 D~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~la 160 (194)
T 1p3y_1 83 DI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPVEIMAFEIA 160 (194)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCBCCC-----
T ss_pred CE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCcccccc
Confidence 53 47777777765532 44678999999522 2 2457777777 47633221111
Q ss_pred -------CCCcCHHHHHHHHHHHhc
Q 017266 316 -------NGIITRQEIYNRVKALLN 333 (374)
Q Consensus 316 -------~~~~~~~~l~~~i~~~l~ 333 (374)
....+.++|.+.+.+.+.
T Consensus 161 cg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 161 TGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp -------CBCCCHHHHHHHHHHHCC
T ss_pred cCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 123567888888877774
No 119
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=31.36 E-value=65 Score=26.87 Aligned_cols=48 Identities=17% Similarity=0.055 Sum_probs=34.3
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEecc
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~~ 54 (374)
..++++++..++..-.-+.-+||+|--...+...|+++|||+..+.+.
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 468888888754321124788999875556778999999999876543
No 120
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=31.27 E-value=85 Score=22.73 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=22.3
Q ss_pred cccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
+||+||.|..++ -+..+++.+ .+|.+.++...
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 599999999875 455655543 47887776554
No 121
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=30.86 E-value=72 Score=26.85 Aligned_cols=153 Identities=10% Similarity=0.017 Sum_probs=72.3
Q ss_pred hhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhc-CCCcEEEeecChHH
Q 017266 178 SWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERV-SDRGKFVEWAPQEK 256 (374)
Q Consensus 178 ~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pq~~ 256 (374)
-|++-... .++.|..|..+ ...++.|.+.|..+.++.... .+.+.... ..++......-+..
T Consensus 25 ifl~L~gk-~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~---------~~~l~~l~~~~~i~~i~~~~~~~ 87 (223)
T 3dfz_A 25 VMLDLKGR-SVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV---------SAEINEWEAKGQLRVKRKKVGEE 87 (223)
T ss_dssp EEECCTTC-CEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC---------CHHHHHHHHTTSCEEECSCCCGG
T ss_pred cEEEcCCC-EEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC---------CHHHHHHHHcCCcEEEECCCCHh
Confidence 34444433 37777666432 456677777888877665422 12221111 23344442222334
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhcCcccccccc-hhhhhhhHHH-----HHhHhcceeEeecCCCCCcCHHHHHHHHHH
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPY-FVDQYQNRNY-----ICDAWKVGSQFFPDENGIITRQEIYNRVKA 330 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~-----v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 330 (374)
.|..+++ +|.--|--.+.+.++.-.- ..+|. ..|.+..+.. +.+. ++-+.+........-+..|++.|.+
T Consensus 88 dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 88 DLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp GSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHH
Confidence 5666777 8877776655555443222 34443 2344443321 1111 3333333322112334557777766
Q ss_pred HhcCh--HHHHHHHHHHHHHHHh
Q 017266 331 LLNDD--GIKANALKMKEMARKS 351 (374)
Q Consensus 331 ~l~~~--~~~~~a~~l~~~~~~~ 351 (374)
.+... .+-+.+.++.+.+++.
T Consensus 164 ~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 164 NYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HccHHHHHHHHHHHHHHHHHHHH
Confidence 66432 3666666666666653
No 122
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=30.77 E-value=57 Score=23.56 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=24.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 54 (374)
++.++.+.. .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 41 ~~a~~~~~~----~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 41 EQGMKIMAQ----NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHHT----SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHHc----CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 444444443 3499999998765 456666554 3455554433
No 123
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=30.51 E-value=31 Score=29.00 Aligned_cols=43 Identities=14% Similarity=-0.010 Sum_probs=28.3
Q ss_pred EEEeecChHH--hhCCCCCCcEEeccCchhHHHHh---------hcCcccccccc
Q 017266 247 KFVEWAPQEK--VLGHPSVACFLSHCGWNSSIEGL---------SMGVPFLCWPY 290 (374)
Q Consensus 247 ~~~~~~pq~~--lL~~~~~~~~I~HgG~~s~~eal---------~~GvP~l~~P~ 290 (374)
.++..++... +...++ ..++--||.||+-|.. .+++|++++-.
T Consensus 90 ~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 90 RVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred cccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4455555433 333444 3567789999988776 47999998864
No 124
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=30.50 E-value=52 Score=23.75 Aligned_cols=42 Identities=19% Similarity=0.224 Sum_probs=24.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHH-------hCCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQ-------MGIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 55 (374)
++.++.+... +||+||.|...+ .+..+.+. -++|++.++...
T Consensus 37 ~~a~~~l~~~----~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 37 TDALHAMSTR----GYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp HHHHHHHHHS----CCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred HHHHHHHHhc----CCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 4445555543 399999998754 44444433 246777765443
No 125
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=30.39 E-value=67 Score=22.73 Aligned_cols=32 Identities=9% Similarity=0.146 Sum_probs=21.7
Q ss_pred ccEEEeCCchh--HHHHHHHHh----CCCeEEEeccch
Q 017266 25 ISCVITDVTVG--WALEIAEQM----GIARAAVVTFAP 56 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 56 (374)
||+||.|...+ .+..+.+.+ .+|.+.++....
T Consensus 46 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (121)
T 1zh2_A 46 PDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSE 83 (121)
T ss_dssp CSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCC
Confidence 99999998764 455555554 577777665443
No 126
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=30.08 E-value=72 Score=22.94 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=21.6
Q ss_pred CcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 23 EQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
.+||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 3499999998765 455555544 36777765443
No 127
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.87 E-value=60 Score=24.01 Aligned_cols=65 Identities=6% Similarity=-0.049 Sum_probs=42.3
Q ss_pred hCCCCCCcEEeccCchh---------HHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHH
Q 017266 258 LGHPSVACFLSHCGWNS---------SIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRV 328 (374)
Q Consensus 258 L~~~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 328 (374)
+..+++ +|.-+|..| +-.|...|+|++++=..+.+..- ..+.+. +.. +-. .+.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~P-~~l~~~-a~~--iV~-----Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENVP-PELEAV-SSE--VVG-----WNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCCC-TTHHHH-CSE--EEC-----SCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcCC-HHHHhh-Cce--ecc-----CCHHHHHHHH
Confidence 344566 888888877 55678899999987665544221 124432 322 222 7899999999
Q ss_pred HHHhc
Q 017266 329 KALLN 333 (374)
Q Consensus 329 ~~~l~ 333 (374)
++.++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88763
No 128
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=29.45 E-value=80 Score=26.53 Aligned_cols=42 Identities=7% Similarity=0.127 Sum_probs=26.9
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 55 (374)
.+.++.+... +||+||.|...+ -+..+.+.+ ++|++.++...
T Consensus 71 ~~al~~~~~~----~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 71 MNGLIKARED----HPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHHS----CCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhcC----CCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 3444444443 499999999875 455555554 57888776554
No 129
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=29.03 E-value=96 Score=23.23 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=26.6
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
..+.++.+... +||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 40 ~~~a~~~l~~~----~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 40 AGEAYRLYRET----TPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHHHTT----CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHHhcC----CCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 34555555543 399999998754 344444333 68888876554
No 130
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.93 E-value=1.1e+02 Score=20.94 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=30.8
Q ss_pred cCcccccccchhhhhh-hH--HHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhc
Q 017266 281 MGVPFLCWPYFVDQYQ-NR--NYICDAWKVGSQFFPDENGIITRQEIYNRVKALLN 333 (374)
Q Consensus 281 ~GvP~l~~P~~~DQ~~-na--~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~ 333 (374)
.|+|++++--.+.|.. |- ....+. |+..-+-+. ..++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlks----tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLKS----TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEEC----CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhcc----CCHHHHHHHHHHHHH
Confidence 5777777665555544 22 122343 777766665 488999999988773
No 131
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.87 E-value=1.5e+02 Score=22.14 Aligned_cols=59 Identities=3% Similarity=-0.069 Sum_probs=34.3
Q ss_pred cCcccccccchhhhhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChHHHHHHHHHH
Q 017266 281 MGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDGIKANALKMK 345 (374)
Q Consensus 281 ~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~ 345 (374)
..+|+|++--..+. .......+ .|+--.+.+. ++.++|.++|++++....++...+++.
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP----~~~~~L~~~i~~~~~~~~~~~~~~~~~ 132 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKP----FAADRLVQSARRAEEKRRLVMENRSLR 132 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESS----CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCC----CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46787777443332 23333334 3664444442 789999999999986555444333333
No 132
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=28.79 E-value=93 Score=21.57 Aligned_cols=42 Identities=5% Similarity=-0.077 Sum_probs=24.3
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHH-------hCCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQ-------MGIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 55 (374)
++.++.+.... ||+||.|...+ .+..+.+. -++|++.++...
T Consensus 35 ~~~~~~l~~~~----~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 35 STALDQLDLLQ----PIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HHHHHHHHHHC----CSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred HHHHHHHHhcC----CCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 34444444433 99999998653 33443333 357888776543
No 133
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=28.74 E-value=69 Score=24.06 Aligned_cols=43 Identities=9% Similarity=0.012 Sum_probs=26.0
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.++.++.+.... ||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 50 ~~~a~~~l~~~~----~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 50 GAAALELIKAHL----PDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHHHHHHC----CSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHHHhcC----CCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 344555554434 99999998754 444444433 57777765543
No 134
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.74 E-value=73 Score=24.22 Aligned_cols=44 Identities=9% Similarity=0.109 Sum_probs=26.4
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+.... ++||+||.|...+ -+..+.+.+ ++|+|.++...
T Consensus 71 ~~al~~l~~~~--~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 71 EEAVIKYKNHY--PNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG 121 (157)
T ss_dssp HHHHHHHHHHG--GGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHHhcC--CCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC
Confidence 44455554431 2489999998754 444444433 57887776543
No 135
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.50 E-value=52 Score=29.50 Aligned_cols=73 Identities=4% Similarity=0.086 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHH
Q 017266 199 LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEG 278 (374)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ea 278 (374)
.+.+..+.+.+++.....+.||....+. +..++.++++...+-.+|+. |+-+.-..+++-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF-----------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch-----------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 4557788899999888888899877551 12245566666667777777 8888887777777
Q ss_pred hh--cCcccccccc
Q 017266 279 LS--MGVPFLCWPY 290 (374)
Q Consensus 279 l~--~GvP~l~~P~ 290 (374)
++ .|+..+.=|+
T Consensus 123 l~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 123 IYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhcCeEEEeCcc
Confidence 65 3555444443
No 136
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.22 E-value=91 Score=22.49 Aligned_cols=41 Identities=10% Similarity=0.059 Sum_probs=23.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh------CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM------GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l------giP~v~~~~~ 54 (374)
++.++.+... +||+||.|...+ -+..+.+.+ ..|.+.+.+.
T Consensus 40 ~~a~~~l~~~----~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 40 FDAGIKLSTF----EPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHHHT----CCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHHHhc----CCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 3444444443 499999998765 455555444 3455555544
No 137
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=28.19 E-value=81 Score=28.07 Aligned_cols=28 Identities=18% Similarity=-0.003 Sum_probs=19.8
Q ss_pred cccEEEeC--Cchh-HHHHHHHHhCCCeEEE
Q 017266 24 QISCVITD--VTVG-WALEIAEQMGIARAAV 51 (374)
Q Consensus 24 ~~D~iI~D--~~~~-~~~~~A~~lgiP~v~~ 51 (374)
+||+|++. .... .+..+|..+|||++.+
T Consensus 91 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 91 GADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 39999983 2333 3456789999998754
No 138
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=28.01 E-value=89 Score=22.50 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=20.7
Q ss_pred cccEEEeCCchh---HHHHHHHHh-----CCCeEEEeccc
Q 017266 24 QISCVITDVTVG---WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~---~~~~~A~~l-----giP~v~~~~~~ 55 (374)
+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 499999997653 244444433 57888876544
No 139
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=27.97 E-value=96 Score=22.77 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=18.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM 44 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l 44 (374)
++.++.+... +||+||.|...+ .+..+.+.+
T Consensus 44 ~~al~~l~~~----~~dlvllD~~lp~~~g~~~~~~l 76 (140)
T 3c97_A 44 LQALQAYQNR----QFDVIIMDIQMPVMDGLEAVSEI 76 (140)
T ss_dssp HHHHHHHHHS----CCSEEEECTTCCSSCHHHHHHHH
T ss_pred HHHHHHHhcC----CCCEEEEeCCCCCCcHHHHHHHH
Confidence 3444444443 399999998764 455554443
No 140
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=27.94 E-value=76 Score=25.13 Aligned_cols=28 Identities=25% Similarity=0.353 Sum_probs=22.3
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH 215 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 215 (374)
+.|+++||....+.+.++..+..|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999997666777888888887653
No 141
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=27.71 E-value=57 Score=26.20 Aligned_cols=33 Identities=27% Similarity=0.520 Sum_probs=22.6
Q ss_pred CcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 23 EQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
.+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 86 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG 86 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 4599999998765 455555444 57888876543
No 142
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=27.65 E-value=65 Score=28.68 Aligned_cols=75 Identities=15% Similarity=0.286 Sum_probs=53.6
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhC-CCCCCcEEeccCchhHH
Q 017266 198 VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLG-HPSVACFLSHCGWNSSI 276 (374)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~-~~~~~~~I~HgG~~s~~ 276 (374)
..+.+..+.+.+++.....+.||..+... +-.++.++++...+-. +|+. ||-+.-...++
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 34567788899999888888898887651 1124455565555555 7877 99999998888
Q ss_pred HHhh-cCcccccccch
Q 017266 277 EGLS-MGVPFLCWPYF 291 (374)
Q Consensus 277 eal~-~GvP~l~~P~~ 291 (374)
-+++ .|++.+.=|+.
T Consensus 124 ~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHTTCCEEECCCG
T ss_pred HHHHHcCCcEEECHhh
Confidence 8887 47777766653
No 143
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=27.60 E-value=64 Score=32.37 Aligned_cols=109 Identities=10% Similarity=0.066 Sum_probs=70.5
Q ss_pred eecChHHhhCCCCCCcEEeccCchhHHHHhhcCcccccccchhhhhhhHHHHHhHhcceeEeecCC--CC--CcCHHHHH
Q 017266 250 EWAPQEKVLGHPSVACFLSHCGWNSSIEGLSMGVPFLCWPYFVDQYQNRNYICDAWKVGSQFFPDE--NG--IITRQEIY 325 (374)
Q Consensus 250 ~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~l~~~~--~~--~~~~~~l~ 325 (374)
++.+-.++|..+++ .||--. +.+.|.+..++|+|......|++.+- . -|...+..+ .| .-+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~----~---rg~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG----L---RGFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTSS----C---CSBSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhhc----c---CCcccChhHhCCCCeECCHHHHH
Confidence 45566789988998 999753 56889999999999988766665431 1 122222111 01 14778899
Q ss_pred HHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q 017266 326 NRVKALLND-DGIKANALKMKEMARKSLGEGGSSFRNFESFISQL 369 (374)
Q Consensus 326 ~~i~~~l~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~v~~~ 369 (374)
++|.+...+ ..|+++.++..+.+-.. ..|.++.+.++.+++..
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcC
Confidence 988877653 45777777777776543 34555555555555543
No 144
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.31 E-value=53 Score=29.61 Aligned_cols=74 Identities=11% Similarity=0.222 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHHH
Q 017266 199 LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIEG 278 (374)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~ea 278 (374)
.+.+..+.+.+++.....+.||....+. +-.++.++++...+-++|+. ||-+.-...++-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM-----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 4557788888999888888888887651 12245566666666678877 9999999889888
Q ss_pred hh--cCcccccccch
Q 017266 279 LS--MGVPFLCWPYF 291 (374)
Q Consensus 279 l~--~GvP~l~~P~~ 291 (374)
++ .|++.+.=|+.
T Consensus 124 l~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 124 IYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHCCCEEECCCH
T ss_pred HHHhcCceEEECChh
Confidence 87 58888777763
No 145
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=27.10 E-value=93 Score=23.26 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=21.8
Q ss_pred cccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
+||+||.|...+ -+..+.+.+ ++|.+.++...
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 599999999765 455554443 47888876554
No 146
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=27.07 E-value=82 Score=25.56 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=21.9
Q ss_pred cccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 46 ~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 46 PFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 499999998765 455544443 67888876554
No 147
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=27.03 E-value=69 Score=23.52 Aligned_cols=28 Identities=4% Similarity=-0.031 Sum_probs=19.9
Q ss_pred ccEEEeCCchh--HHHHHHHHh-----CCCeEEEe
Q 017266 25 ISCVITDVTVG--WALEIAEQM-----GIARAAVV 52 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~ 52 (374)
||+||.|...+ .+..+.+.+ ++|++.++
T Consensus 61 ~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 61 CDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp CSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 99999998765 456666655 46776655
No 148
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=26.65 E-value=75 Score=25.73 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=22.2
Q ss_pred cccEEEeCCchh--HHHHHHHH---------hCCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQ---------MGIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~---------lgiP~v~~~~~~ 55 (374)
+||+||.|..++ -+..+++. -.+|+|.++...
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 599999999765 45444433 357888877654
No 149
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.53 E-value=90 Score=25.89 Aligned_cols=46 Identities=28% Similarity=0.403 Sum_probs=32.8
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
.++.+++.+++.......-+||++.-...+...|+++|||+..+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 4777887765432013466788998777788899999999987654
No 150
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=26.41 E-value=1.7e+02 Score=27.23 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=71.8
Q ss_pred CceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCC-CCC
Q 017266 186 GSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHP-SVA 264 (374)
Q Consensus 186 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~-~~~ 264 (374)
.+.|-|-+||.+ +...+++....|+..|.++-..+-+ ....|+.+. .+..+..- ... .+
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s------aHR~p~~~~----------~~~~~~~~-~g~~~v- 324 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS------AHKGPDETL----------RIKAEYEG-DGIPTV- 324 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHH----------HHHHHHHT-TCCCEE-
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee------ccCCHHHHH----------HHHHHHHH-CCCCeE-
Confidence 357777888765 4567788888888888875333321 223443331 11111110 112 24
Q ss_pred cEEeccCch----hHHHHhhcCcccccccchh-hhhhhH-HHHHh--HhcceeEeecCCCCCcCHHHHHHHHHHHhcChH
Q 017266 265 CFLSHCGWN----SSIEGLSMGVPFLCWPYFV-DQYQNR-NYICD--AWKVGSQFFPDENGIITRQEIYNRVKALLNDDG 336 (374)
Q Consensus 265 ~~I~HgG~~----s~~eal~~GvP~l~~P~~~-DQ~~na-~~v~~--~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 336 (374)
+|.=+|.. ++..++ .-+|+|++|... .+-..+ -.+.+ . |+.+..-.. ..++.-++..|. -+.|+.
T Consensus 325 -iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~---~~nAa~~A~~Il-~~~~~~ 397 (425)
T 2h31_A 325 -FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLS---PEGSAQFAAQIF-GLSNHL 397 (425)
T ss_dssp -EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCC---HHHHHHHHHHHH-HTTCHH
T ss_pred -EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecC---chHHHHHHHHHH-ccCCHH
Confidence 77777764 444333 367999999842 111111 11122 1 333322111 134555555554 346788
Q ss_pred HHHHHHHHHHHHHHh
Q 017266 337 IKANALKMKEMARKS 351 (374)
Q Consensus 337 ~~~~a~~l~~~~~~~ 351 (374)
++++.+......+..
T Consensus 398 l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 398 VWSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877777766553
No 151
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=26.39 E-value=36 Score=28.37 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=25.3
Q ss_pred CcccEE-EeCCchh-HHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..||++ |+|+-.- .+..=|.++|||+|++.=+.+
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn~ 149 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNN 149 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCCC
Confidence 457876 5787653 777789999999999875544
No 152
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=26.34 E-value=1.6e+02 Score=20.72 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=15.8
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 017266 327 RVKALLNDDGIKANALKMKEMARKSLGEGG 356 (374)
Q Consensus 327 ~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g 356 (374)
.+.++++|.+.-+|.++.+...++.+...+
T Consensus 18 ~L~~I~~D~sVPRNIRraA~ea~~~L~~e~ 47 (89)
T 2qsb_A 18 LLDELSQDITVPKNVRKVAQDSKAKLSQEN 47 (89)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCC
Confidence 455666777744444444444444443343
No 153
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=26.01 E-value=87 Score=24.80 Aligned_cols=28 Identities=25% Similarity=0.353 Sum_probs=23.2
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH 215 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 215 (374)
.+|+++||....+...++..++.|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999997767788888888887753
No 154
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=25.90 E-value=1.1e+02 Score=24.10 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=24.0
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH 215 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 215 (374)
.+|+++||....+...++..++.|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998778888999999998754
No 155
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.70 E-value=1.8e+02 Score=23.71 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=53.7
Q ss_pred ccchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEE--ee
Q 017266 174 STCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFV--EW 251 (374)
Q Consensus 174 ~~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 251 (374)
.++-.+|.+.. ..+|+.|.. ..+....++..+.+-++|-+++.. .. +..+ ....+. ..
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e------~~-~~~~-----~~~~~~~~~~ 107 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDE------EA-GNPY-----LSVAVKTGLD 107 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTT------CC-CCTT-----CSEEEECCCC
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCc------cc-CCCC-----cceeeecCCC
Confidence 34455666543 566664443 344556666656666777666532 11 1111 222333 24
Q ss_pred cC-hHHhh-CCCCCCcEEeccCchhHHH---HhhcCcccccccc
Q 017266 252 AP-QEKVL-GHPSVACFLSHCGWNSSIE---GLSMGVPFLCWPY 290 (374)
Q Consensus 252 ~p-q~~lL-~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~ 290 (374)
++ .+.++ ..++ ..++--||.||+.| ++.+++|+++++.
T Consensus 108 f~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 108 FQMRSFVLLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 55 33444 4444 45777888887765 5779999999973
No 156
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=25.65 E-value=89 Score=25.51 Aligned_cols=41 Identities=5% Similarity=0.187 Sum_probs=24.9
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
.+.++.+... +||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 41 ~~a~~~~~~~----~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 41 AEALRSATEN----RPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp HHHHHHHHHS----CCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHHHHHhC----CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 3344444443 499999998765 455554443 6787776544
No 157
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=25.61 E-value=38 Score=29.19 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=25.8
Q ss_pred CcccEEE-eCCchh-HHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCVI-TDVTVG-WALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI-~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..||+|| +|+..- .+..=|.++|||+|+++=+.+
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~ 185 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDS 185 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcCCC
Confidence 4578774 687653 677789999999999875544
No 158
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=25.45 E-value=79 Score=27.60 Aligned_cols=44 Identities=27% Similarity=0.335 Sum_probs=35.5
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeEEEe
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARAAVV 52 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v~~~ 52 (374)
-...+.++++.+++.+ ..+|+++.... .+..+|+..|++++.+.
T Consensus 213 s~~~l~~l~~~ik~~~----v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 213 SPRQLKEIQDFVKEYN----VKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp CHHHHHHHHHHHHHTT----CCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred CHHHHHHHHHHHHHcC----CCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 3567888888888766 99999999764 66679999999988754
No 159
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=25.41 E-value=96 Score=22.75 Aligned_cols=33 Identities=9% Similarity=0.159 Sum_probs=21.9
Q ss_pred CcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 23 EQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
.+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 58 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 58 IHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp CCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCC
Confidence 3499999998764 455555554 46777765543
No 160
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=25.34 E-value=55 Score=23.85 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=20.3
Q ss_pred cccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 84 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKN 84 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC-
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCC
Confidence 399999998764 455555443 57777665443
No 161
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=25.31 E-value=1.1e+02 Score=22.49 Aligned_cols=31 Identities=6% Similarity=0.311 Sum_probs=20.1
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM 44 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l 44 (374)
.+.++.+... +||+||.|...+ .+..+++.+
T Consensus 45 ~~al~~l~~~----~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 45 LDVLKFLQHN----KVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHHHC----CCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCEEEEecCCCCCCHHHHHHHH
Confidence 4445555443 399999998764 566666665
No 162
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=25.21 E-value=98 Score=26.86 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHh-hCCCCCCcEEeccCchhHHH
Q 017266 199 LSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKV-LGHPSVACFLSHCGWNSSIE 277 (374)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~l-L~~~~~~~~I~HgG~~s~~e 277 (374)
.....+..+++.+++.+..|+.-.+... .-...+ . + -..-..+ -.+|+++.++.|||+....+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~------~~~~~~----~-~-----p~~~~~v~~~~P~l~ivl~H~G~~~~~~ 198 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNA------GPDITY----T-N-----PEHIDRVLGDFPDLTVVSSHGNWPWVQE 198 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSC------SSSGGG----G-C-----HHHHHHHHHHCTTCCEEEEGGGTTCHHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCC------CCCCcc----C-C-----HHHHHHHHHHCCCCEEEeecCCcccHHH
Confidence 3456677888888888888776655320 000000 0 0 0011223 35789999999999887776
Q ss_pred Hhhc--Ccccccccchh---hhh--hhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH-----HHHHHHHHH
Q 017266 278 GLSM--GVPFLCWPYFV---DQY--QNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG-----IKANALKMK 345 (374)
Q Consensus 278 al~~--GvP~l~~P~~~---DQ~--~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~-----~~~~a~~l~ 345 (374)
++.. ..|-+.+-..+ ... .....+.+..|.-..+-..+-...+.....+.+.++--+++ +.+||+++-
T Consensus 199 ~~~l~~~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~g~drllfgSD~P~~~~~~~~~~~~~l~l~~e~~~~i~~~NA~rl~ 278 (291)
T 3irs_A 199 IIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCPLKEYTEWFLTLPIKPDAMEKILHGNAERLL 278 (291)
T ss_dssp HHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSCHHHHHHHHHTSSCCHHHHHHHHTHHHHHHH
T ss_pred HHHHHhHCCCeEecHHHHhccCCCHHHHHHHHHHhCcceEEEecCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 6553 12222221110 011 11112233247666665544344566655666655411222 566776665
Q ss_pred HH
Q 017266 346 EM 347 (374)
Q Consensus 346 ~~ 347 (374)
..
T Consensus 279 ~~ 280 (291)
T 3irs_A 279 AQ 280 (291)
T ss_dssp HH
T ss_pred Cc
Confidence 43
No 163
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.92 E-value=76 Score=23.34 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=22.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHH-------hCCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQ-------MGIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 54 (374)
.+.++.+.... ||+||.|...+ -+..+.+. -++|++.++..
T Consensus 36 ~~a~~~~~~~~----~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 36 KEALEQIDHHH----PDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHHHHC----CSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHHhcCC----CCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 44455554434 99999998764 33333333 35777776544
No 164
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.84 E-value=2.3e+02 Score=23.19 Aligned_cols=71 Identities=13% Similarity=-0.007 Sum_probs=44.7
Q ss_pred CcEEeccCchhHHH----------------HhhcCcccccccc----hhhhhhhHHHHHhHhcceeEeecCCCC------
Q 017266 264 ACFLSHCGWNSSIE----------------GLSMGVPFLCWPY----FVDQYQNRNYICDAWKVGSQFFPDENG------ 317 (374)
Q Consensus 264 ~~~I~HgG~~s~~e----------------al~~GvP~l~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~------ 317 (374)
..+|.-|-+||+.. ++..+.|+++.|- ...+..|...+.+ +|+=+.....+++
T Consensus 89 ~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~~~~p~ 167 (201)
T 3lqk_A 89 CMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNPQVKPN 167 (201)
T ss_dssp EEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCTTTCTT
T ss_pred EEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccccccCCC
Confidence 45777777775542 2446899999995 4567779988887 4754443221000
Q ss_pred --CcCHHHHHHHHHHHhcCh
Q 017266 318 --IITRQEIYNRVKALLNDD 335 (374)
Q Consensus 318 --~~~~~~l~~~i~~~l~~~ 335 (374)
....+.|.+.|.+.+++.
T Consensus 168 s~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 168 SLVARMEALPETIEAALRGQ 187 (201)
T ss_dssp CEEECGGGHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHHHhcC
Confidence 123467888888888653
No 165
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.66 E-value=1.1e+02 Score=22.55 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=21.9
Q ss_pred cccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
+||+||.|...+ .+..+.+.+ ++|+|.++...
T Consensus 62 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~ 102 (149)
T 1k66_A 62 RPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSS 102 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCC
Confidence 499999998764 455555543 46777776554
No 166
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.64 E-value=1.1e+02 Score=22.33 Aligned_cols=42 Identities=12% Similarity=0.076 Sum_probs=25.2
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 55 (374)
++.++.+... +||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 44 ~~a~~~l~~~----~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 44 FDAGDLLHTV----KPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGAL 94 (143)
T ss_dssp HHHHHHHHHT----CCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSC
T ss_pred HHHHHHHHhc----CCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCC
Confidence 4445555443 399999998754 344444433 46777766544
No 167
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=24.62 E-value=98 Score=22.43 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=19.5
Q ss_pred ccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 25 ISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 48 ~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (136)
T 1mvo_A 48 PDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAK 84 (136)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred CCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECC
Confidence 89999998764 344444433 5677776544
No 168
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=24.60 E-value=84 Score=26.26 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=26.3
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+.... ||+||.|..++ -+..+++.+ ++|++.++...
T Consensus 57 ~~al~~~~~~~----~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARETR----PDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHHHC----CSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHhCC----CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 34444444433 99999998765 455555443 57888776544
No 169
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=24.49 E-value=1e+02 Score=22.77 Aligned_cols=43 Identities=12% Similarity=0.148 Sum_probs=25.5
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEeccch
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVTFAP 56 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 56 (374)
.+.++.+.... ||+||.|...+ .+..+.+.+ ++|+|.++....
T Consensus 42 ~~a~~~l~~~~----~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 42 IEAVPVAVKTH----PHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRAT 93 (147)
T ss_dssp HHHHHHHHHHC----CSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCC
T ss_pred HHHHHHHHcCC----CCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCC
Confidence 34444444433 99999998654 344444332 578887765543
No 170
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=24.39 E-value=1.1e+02 Score=25.00 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=55.2
Q ss_pred cchhhhhcCCCCceEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecCh
Q 017266 175 TCLSWLDKQAIGSVIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQ 254 (374)
Q Consensus 175 ~~~~~l~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq 254 (374)
++-.+|.++. ..+|+.|... ..+....++..+.+-+++=+....... .......-++..+++.++.
T Consensus 24 ~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~~-------~e~~~~~~~~~~~~~~~~~ 89 (191)
T 1t35_A 24 ELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLFS-------GEVVHQNLTELIEVNGMHE 89 (191)
T ss_dssp HHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCCH-------HHHTTCCCSEEEEESHHHH
T ss_pred HHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhcc-------cccccCCCCccccCCCHHH
Confidence 3445565543 5667766531 245666666666676776666533110 0000000122244566664
Q ss_pred HH-hhCCCCCCcEEeccCchhHHHH---h------hcCcccccccc
Q 017266 255 EK-VLGHPSVACFLSHCGWNSSIEG---L------SMGVPFLCWPY 290 (374)
Q Consensus 255 ~~-lL~~~~~~~~I~HgG~~s~~ea---l------~~GvP~l~~P~ 290 (374)
.. ++...+-..++--||.||+-|. + .+++|++++-.
T Consensus 90 Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 90 RKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 43 4433333467788999987765 4 37899998854
No 171
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=24.30 E-value=83 Score=25.39 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=25.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
++.++.+.... ||+||.|..++ .+..+.+.+ .+|.+.++...
T Consensus 41 ~~al~~~~~~~----~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~ 89 (215)
T 1a04_A 41 EQGIELAESLD----PDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSN 89 (215)
T ss_dssp HHHHHHHHHHC----CSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCC
T ss_pred HHHHHHHHhcC----CCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCC
Confidence 34444444433 99999999775 455555544 46777765543
No 172
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.25 E-value=86 Score=26.06 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=32.7
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
..++++++.+.+..-.-..-+||+|.-...+...|+++|||+..+..
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 46788888876432002467789986544567899999999988543
No 173
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.20 E-value=1.1e+02 Score=25.42 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=32.7
Q ss_pred HHHHHHHHHhHhcCCCC--cccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 7 GCLKNFIEQVKESNDCE--QISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~--~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
..+..+++.+.+.+ . ..-+||++.-...+...|+++|||+..+.+
T Consensus 13 ~~~~~~l~~l~~~~--~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 59 (216)
T 2ywr_A 13 SNLQAIIDAIESGK--VNASIELVISDNPKAYAIERCKKHNVECKVIQR 59 (216)
T ss_dssp HHHHHHHHHHHTTS--SCEEEEEEEESCTTCHHHHHHHHHTCCEEECCG
T ss_pred HHHHHHHHHHHhCC--CCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCc
Confidence 45677888876543 2 356788887555678889999999987544
No 174
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=24.17 E-value=53 Score=24.21 Aligned_cols=34 Identities=9% Similarity=0.186 Sum_probs=22.9
Q ss_pred CcccEEEeCCchhH----HHHHHHHh-----CCCeEEEeccch
Q 017266 23 EQISCVITDVTVGW----ALEIAEQM-----GIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI~D~~~~~----~~~~A~~l-----giP~v~~~~~~~ 56 (374)
.+||+||.|...+. +..+.+.+ ++|++.++....
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 91 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSD 91 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCC
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCC
Confidence 45999999987644 44454443 678888765543
No 175
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=24.15 E-value=69 Score=24.08 Aligned_cols=42 Identities=12% Similarity=0.148 Sum_probs=20.7
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
.+.++.+.. + .+||+||.|...+ .+..+.+.+ ++|+|.++..
T Consensus 39 ~~a~~~l~~-~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 87 (154)
T 2qsj_A 39 SDALAFLEA-D--NTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGE 87 (154)
T ss_dssp HHHHHHHHT-T--CCCSEEEECC------CHHHHHHHHHHCTTSEEEEC---
T ss_pred HHHHHHHhc-c--CCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCC
Confidence 445555543 1 2499999998754 333333333 5777775543
No 176
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=23.69 E-value=33 Score=28.91 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=25.2
Q ss_pred cccEE-EeCCchh-HHHHHHHHhCCCeEEEeccch
Q 017266 24 QISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 56 (374)
.||++ |+|+-.- .+..=|.++|||+|++.-+.+
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn~ 183 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNS 183 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCcC
Confidence 47765 7788654 677789999999999875544
No 177
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=23.68 E-value=62 Score=23.71 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=23.7
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
++.++.+.... ||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 41 ~~a~~~l~~~~----~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (137)
T 3hdg_A 41 EEGERLFGLHA----PDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAF 88 (137)
T ss_dssp HHHHHHHHHHC----CSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCC
T ss_pred HHHHHHHhccC----CCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecC
Confidence 34445554433 99999998754 344444433 4666655433
No 178
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.55 E-value=78 Score=29.86 Aligned_cols=24 Identities=25% Similarity=0.319 Sum_probs=20.4
Q ss_pred ccEEEeCCchhHHHHHHHHhCCCeEEE
Q 017266 25 ISCVITDVTVGWALEIAEQMGIARAAV 51 (374)
Q Consensus 25 ~D~iI~D~~~~~~~~~A~~lgiP~v~~ 51 (374)
||++|.... ...+|+++|||++.+
T Consensus 376 pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 376 AQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp CSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred CCEEEEChh---HHHHHHHcCCCEEEe
Confidence 999999864 677999999998863
No 179
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=23.53 E-value=86 Score=25.58 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=21.7
Q ss_pred ccEEEeCCchh--HHHHHHHH----hCCCeEEEeccch
Q 017266 25 ISCVITDVTVG--WALEIAEQ----MGIARAAVVTFAP 56 (374)
Q Consensus 25 ~D~iI~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 56 (374)
||+||.|...+ -+..+++. -++|++.++....
T Consensus 49 ~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 49 ADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 99999998764 34444443 3788888765543
No 180
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.50 E-value=42 Score=27.85 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=25.3
Q ss_pred CcccEE-EeCCchh-HHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCV-ITDVTVG-WALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~i-I~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..||++ |+|+-.- .+..=|.++|||+|+++-+.+
T Consensus 110 ~~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn~ 145 (202)
T 3j20_B 110 FEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTEN 145 (202)
T ss_dssp CCCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTTC
T ss_pred cCCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCCC
Confidence 357776 6787653 677789999999999875544
No 181
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.28 E-value=74 Score=28.45 Aligned_cols=29 Identities=21% Similarity=0.148 Sum_probs=20.8
Q ss_pred ccEEEeCCchh-HHHHHHHHhCCCeEEEec
Q 017266 25 ISCVITDVTVG-WALEIAEQMGIARAAVVT 53 (374)
Q Consensus 25 ~D~iI~D~~~~-~~~~~A~~lgiP~v~~~~ 53 (374)
||+||...... -...+.+.+|||++.+..
T Consensus 97 PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 97 PDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 99999865432 334456789999998743
No 182
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=23.28 E-value=1.5e+02 Score=24.16 Aligned_cols=42 Identities=12% Similarity=-0.050 Sum_probs=26.7
Q ss_pred EEEeecChHH--hhCCCCCCcEEeccCchhHHHHh---------hcCccccccc
Q 017266 247 KFVEWAPQEK--VLGHPSVACFLSHCGWNSSIEGL---------SMGVPFLCWP 289 (374)
Q Consensus 247 ~~~~~~pq~~--lL~~~~~~~~I~HgG~~s~~eal---------~~GvP~l~~P 289 (374)
.+++++.... ++.+++. .++--||.||+-|.. .+++|++++=
T Consensus 93 i~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred EEcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 4455554433 4445553 466678889988864 2689998874
No 183
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=23.12 E-value=1.2e+02 Score=21.81 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=22.0
Q ss_pred cccEEEeCCchh--HHHHHHHH-------hCCCeEEEeccch
Q 017266 24 QISCVITDVTVG--WALEIAEQ-------MGIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~-------lgiP~v~~~~~~~ 56 (374)
+||+||.|...+ .+..+.+. -++|++.++....
T Consensus 55 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~ 96 (140)
T 1k68_A 55 RPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSIN 96 (140)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCC
T ss_pred CCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCc
Confidence 499999998764 44444443 3578888765543
No 184
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=23.08 E-value=1.2e+02 Score=22.24 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=24.6
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh---HHHHHHHH----hCCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG---WALEIAEQ----MGIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~---~~~~~A~~----lgiP~v~~~~~ 54 (374)
++.++.+.. + .+||+||.|...+ .+..+.+. -++|+|.++..
T Consensus 39 ~~a~~~l~~-~--~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 39 EAAVEKVSG-G--WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp HHHHHHHHT-T--CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred HHHHHHHhc-C--CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 344444443 1 3499999998653 34444433 36887776544
No 185
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=23.00 E-value=1.3e+02 Score=22.30 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=22.5
Q ss_pred CcccEEEeCCchh--HHHHHHHH-------hCCCeEEEeccch
Q 017266 23 EQISCVITDVTVG--WALEIAEQ-------MGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI~D~~~~--~~~~~A~~-------lgiP~v~~~~~~~ 56 (374)
.+||+||.|...+ .+..+++. -++|++.++....
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 100 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDD 100 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCC
Confidence 4699999998764 44444433 3578888765543
No 186
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=22.77 E-value=1.1e+02 Score=25.46 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=33.4
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
..++++++..++. -....-+||++.-...+...|+++|||+..+.+
T Consensus 17 snl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 17 TNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 4678888887642 013477889987655677899999999988643
No 187
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=22.71 E-value=2.8e+02 Score=21.79 Aligned_cols=135 Identities=14% Similarity=0.156 Sum_probs=70.5
Q ss_pred EEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEe
Q 017266 189 IYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLS 268 (374)
Q Consensus 189 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~ 268 (374)
|-|-+||.. +....++....|+..+.++=..+-. ....|+.+. ++...+.-+.||.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s------aHR~p~~~~----------------~~~~~a~~~ViIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS------AHRTPELVE----------------EIVKNSKADVFIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHH----------------HHHHHCCCSEEEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHH----------------HHHHhcCCCEEEE
Confidence 445566654 4567788888888888775333321 123444331 1221111133887
Q ss_pred ccCchhHHHHhhc---Ccccccccchhh-hhhhH-HHHHh--HhcceeEe-ecCCCCCcCHHHHHHHHHHHhcChHHHHH
Q 017266 269 HCGWNSSIEGLSM---GVPFLCWPYFVD-QYQNR-NYICD--AWKVGSQF-FPDENGIITRQEIYNRVKALLNDDGIKAN 340 (374)
Q Consensus 269 HgG~~s~~eal~~---GvP~l~~P~~~D-Q~~na-~~v~~--~~g~G~~l-~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 340 (374)
=+|...-+-.+.+ -+|+|.+|.... .-..+ -.+.+ . |+.+.. ..+ +..++.-+...|. -+.|++++++
T Consensus 58 ~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I~--~~~nAa~lA~~Il-~~~d~~l~~k 133 (157)
T 2ywx_A 58 IAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGID--RGENAAILALEIL-ALKDENIAKK 133 (157)
T ss_dssp EEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCTT--CHHHHHHHHHHHH-TTTCHHHHHH
T ss_pred EcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEecC--CcHHHHHHHHHHH-hcCCHHHHHH
Confidence 7776444444333 569999998221 11122 12333 1 433322 221 1145555555443 3468889998
Q ss_pred HHHHHHHHHHh
Q 017266 341 ALKMKEMARKS 351 (374)
Q Consensus 341 a~~l~~~~~~~ 351 (374)
.+..++..++.
T Consensus 134 l~~~r~~~~~~ 144 (157)
T 2ywx_A 134 LIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 188
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=22.67 E-value=45 Score=29.41 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=26.1
Q ss_pred CcccEEE-eCCchh-HHHHHHHHhCCCeEEEeccchh
Q 017266 23 EQISCVI-TDVTVG-WALEIAEQMGIARAAVVTFAPA 57 (374)
Q Consensus 23 ~~~D~iI-~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 57 (374)
+.||+|| +|+..- -+..=|.++|||+|.++-+.+.
T Consensus 117 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~d 153 (295)
T 2zkq_b 117 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSP 153 (295)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTCC
T ss_pred cCCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCCCC
Confidence 4578774 687653 6777899999999998766543
No 189
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=22.65 E-value=73 Score=27.35 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=23.0
Q ss_pred CcccEEEe----------CCchh---HHHHHHHHhCCCeEEEec
Q 017266 23 EQISCVIT----------DVTVG---WALEIAEQMGIARAAVVT 53 (374)
Q Consensus 23 ~~~D~iI~----------D~~~~---~~~~~A~~lgiP~v~~~~ 53 (374)
.+||+||+ |.+.. .|+.-|..+|||.|+++.
T Consensus 84 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 84 KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 45999998 55443 555567888999999874
No 190
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=22.26 E-value=3e+02 Score=22.02 Aligned_cols=110 Identities=12% Similarity=0.136 Sum_probs=59.7
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEE-ee----cChHHhhCCCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFV-EW----APQEKVLGHPS 262 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~pq~~lL~~~~ 262 (374)
+++...||.... ....+++.|.+.+..+-.+.... ...-+.....+...++ .. .| +.+..+...++
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~--~~d~~~~~~~~hi~l~~~aD 75 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPS----SKNFINTDVLKLFCDN--LYDEIKDPLLNHINIVENHE 75 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGG----GGGTSCGGGGGGTSSC--EECTTTCTTCCHHHHHHTCS
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHHhCC--cccccCCCCCccccccccCC
Confidence 566666666443 23566777777777765555433 1111111112233444 33 23 23444455555
Q ss_pred CCcEEeccCchhHHH-------------HhhcCcccccccchh----h---hhhhHHHHHhHhcce
Q 017266 263 VACFLSHCGWNSSIE-------------GLSMGVPFLCWPYFV----D---QYQNRNYICDAWKVG 308 (374)
Q Consensus 263 ~~~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~----D---Q~~na~~v~~~~g~G 308 (374)
+ .+|.-|-+||+.. ++..++|+++.|-.. . ...|...+.+ +|+-
T Consensus 76 ~-~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~-~G~~ 139 (181)
T 1g63_A 76 Y-ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKN-NDVK 139 (181)
T ss_dssp E-EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHT-TTCE
T ss_pred E-EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHH-CCCE
Confidence 4 5777788776543 255678999999432 2 2456677776 4653
No 191
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=22.18 E-value=29 Score=29.52 Aligned_cols=33 Identities=21% Similarity=0.111 Sum_probs=24.5
Q ss_pred cccEEE-eCCch-hHHHHHHHHhCCCeEEEeccch
Q 017266 24 QISCVI-TDVTV-GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 24 ~~D~iI-~D~~~-~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
.||+|| +|+.. ..+..=|.++|||+|++.=+.+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn~ 191 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTNC 191 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCCC
Confidence 588875 67754 3677779999999999765443
No 192
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=22.14 E-value=63 Score=26.55 Aligned_cols=41 Identities=10% Similarity=0.258 Sum_probs=25.0
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-----CCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-----GIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~ 54 (374)
++.++.+.... ||+||.|..++ .+..+++.+ ++|++.++..
T Consensus 37 ~~al~~l~~~~----~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 37 AEAMARVPAAR----PDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp HHHHHHHHHHC----CSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred HHHHHHHhhcC----CCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 44455554433 99999999765 455555443 5677665443
No 193
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=22.14 E-value=31 Score=30.04 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=23.5
Q ss_pred CCCCcEEeccCchhHHHHhhc------Ccccccccc
Q 017266 261 PSVACFLSHCGWNSSIEGLSM------GVPFLCWPY 290 (374)
Q Consensus 261 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~ 290 (374)
+++ +|+=||=||+++++.. ++|++++|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999998765 889998874
No 194
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.01 E-value=1.1e+02 Score=24.23 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=23.0
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH 215 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 215 (374)
.+|+++||....+.+.++..++.|.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999997767788888888888753
No 195
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.97 E-value=1.1e+02 Score=24.33 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=22.8
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCC
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLH 215 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 215 (374)
.+|+++||....+...++..++.|.+.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6999999997667778888888887743
No 196
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=21.86 E-value=85 Score=23.28 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=21.4
Q ss_pred cccEEEeCCchh--HHHHHHHHh-----CCCeEEEeccc
Q 017266 24 QISCVITDVTVG--WALEIAEQM-----GIARAAVVTFA 55 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 55 (374)
+||+||.|...+ -+..+.+.+ ++|+|.++...
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDA 105 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 399999999764 444444433 57887776544
No 197
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=21.83 E-value=1.7e+02 Score=23.10 Aligned_cols=43 Identities=14% Similarity=0.024 Sum_probs=31.8
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchh---HHHHHHHHhCCCeEEEecc
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVG---WALEIAEQMGIARAAVVTF 54 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~---~~~~~A~~lgiP~v~~~~~ 54 (374)
....++|.++.+ + ||+|++-.... .+..+|.+||+|.++..+.
T Consensus 57 e~~a~~l~~~~~-~----p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~ 102 (166)
T 3fet_A 57 DAVSEGILKIAG-N----YDYIAIGSTEVGREIAGYLSFKTGFYTATEIFS 102 (166)
T ss_dssp HHHHHHHHHHHT-T----CSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHHHHHc-C----CCEEEEcCCCccccHHHHHHHHhCCCceeeEEE
Confidence 456667777764 4 99999877543 4556899999999997644
No 198
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.82 E-value=1.1e+02 Score=25.30 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=32.0
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
..+..+++.+.+..-....-+||++.-...+...|+++|||+..+.+
T Consensus 15 ~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 15 TNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSP 61 (212)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCc
Confidence 45677888876542002356688886555677889999999887544
No 199
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=21.81 E-value=2.1e+02 Score=23.15 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=37.3
Q ss_pred hhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHH
Q 017266 294 QYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG---IKANALKMKEMARK 350 (374)
Q Consensus 294 Q~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~---~~~~a~~l~~~~~~ 350 (374)
+..|+++-++ .|.=.++--.. .+.++|.+++++=|.|+. .+..+.++.++.+.
T Consensus 117 ~~LN~~Ye~k-FGfpFVi~v~G---~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~~ 172 (181)
T 2q37_A 117 AEWNVLYKKK-FGFIFIICASG---RTHAEMLHALKERYENRPIVELEIAAMEQMKITEL 172 (181)
T ss_dssp HHHHHHHHHH-HSSCCCCCCSS---CCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCeEEEEeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3458888888 48777776554 688999999998887664 55555666555443
No 200
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.73 E-value=1e+02 Score=22.58 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=22.6
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHh-------CCCeEEEec
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQM-------GIARAAVVT 53 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~l-------giP~v~~~~ 53 (374)
++.++.+.. .+||+||.|...+ .+..+.+.+ .+|++.++.
T Consensus 41 ~~a~~~l~~----~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 41 GQCIDLLKK----GFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp HHHHHHHHT----CCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred HHHHHHHHh----cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEEC
Confidence 344455543 3499999998654 344444333 356666543
No 201
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=21.56 E-value=1.1e+02 Score=26.57 Aligned_cols=41 Identities=15% Similarity=0.294 Sum_probs=25.8
Q ss_pred HHHHHHhHhcCCCCcccEEEeCCchh-H--HHHHH----HHhCCCeEEEecc
Q 017266 10 KNFIEQVKESNDCEQISCVITDVTVG-W--ALEIA----EQMGIARAAVVTF 54 (374)
Q Consensus 10 ~~ll~~l~~~~~~~~~D~iI~D~~~~-~--~~~~A----~~lgiP~v~~~~~ 54 (374)
++.++.+... +||+||.|..+| . |..++ +.-++|+|.++..
T Consensus 195 ~eAl~~~~~~----~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 195 GEALEAVTRR----TPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHHC----CCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHhC----CCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 3445555543 499999999887 2 32222 2228999887754
No 202
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=21.56 E-value=1.9e+02 Score=19.30 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=30.2
Q ss_pred CcCHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHhh-ccCCCh-HHHHHHHHHHHH
Q 017266 318 IITRQEIYNRVKALLNDDG-IKANALKMKEMARKSL-GEGGSS-FRNFESFISQLK 370 (374)
Q Consensus 318 ~~~~~~l~~~i~~~l~~~~-~~~~a~~l~~~~~~~~-~~~g~~-~~~~~~~v~~~~ 370 (374)
..+.++|.++|+++|.+.+ ..-..+++.+.+.+.. +-.=++ ...|...|..+.
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 3789999999999997654 2222234444444432 222222 445666666544
No 203
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.35 E-value=1.3e+02 Score=24.85 Aligned_cols=47 Identities=23% Similarity=0.348 Sum_probs=33.5
Q ss_pred HHHHHHHHHhHhcCCCCcccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 7 GCLKNFIEQVKESNDCEQISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 7 ~~l~~ll~~l~~~~~~~~~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
..++.+++.+++..-....-+||++.-...+...|+++|||+..+.+
T Consensus 12 snl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 12 SNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 35788888876432012367789987666678899999999888543
No 204
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=21.28 E-value=74 Score=26.35 Aligned_cols=31 Identities=10% Similarity=0.246 Sum_probs=21.1
Q ss_pred cccEEEeCCchh--HHHHHHHHh----CCCeEEEecc
Q 017266 24 QISCVITDVTVG--WALEIAEQM----GIARAAVVTF 54 (374)
Q Consensus 24 ~~D~iI~D~~~~--~~~~~A~~l----giP~v~~~~~ 54 (374)
+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 49 ~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~ 85 (238)
T 2gwr_A 49 RPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAK 85 (238)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEET
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCC
Confidence 399999998764 455555444 6888876544
No 205
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=21.11 E-value=96 Score=27.49 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=20.3
Q ss_pred ccEEEeCCchhHHHHHHHHhCCCeEEEec
Q 017266 25 ISCVITDVTVGWALEIAEQMGIARAAVVT 53 (374)
Q Consensus 25 ~D~iI~D~~~~~~~~~A~~lgiP~v~~~~ 53 (374)
||+||......-...--+++|||++.+..
T Consensus 117 PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 117 PDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 99999976533333444677999998753
No 206
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=21.06 E-value=1.7e+02 Score=20.79 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=16.9
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 017266 327 RVKALLNDDGIKANALKMKEMARKSLGEGG 356 (374)
Q Consensus 327 ~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g 356 (374)
.+.++++|.+.-+|.++.+...++.+...+
T Consensus 22 ~L~~I~~D~sVPRNIRraA~ea~~~L~~e~ 51 (94)
T 2qzg_A 22 MLEEIVEDTTVPRNIRAAADNAKNALHNEE 51 (94)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCC
Confidence 455666777755555555555555543344
No 207
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=21.04 E-value=1.3e+02 Score=23.04 Aligned_cols=43 Identities=12% Similarity=0.092 Sum_probs=25.8
Q ss_pred HHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHH----HHhCCCeEEEeccc
Q 017266 9 LKNFIEQVKESNDCEQISCVITDVTVG--WALEIA----EQMGIARAAVVTFA 55 (374)
Q Consensus 9 l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A----~~lgiP~v~~~~~~ 55 (374)
..+.++.+.... ||+||.|...+ .+..+. +...+|.+.++...
T Consensus 60 ~~~al~~l~~~~----~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~~~ 108 (164)
T 3t8y_A 60 GLEAVEKAIELK----PDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSSLT 108 (164)
T ss_dssp HHHHHHHHHHHC----CSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEESSC
T ss_pred HHHHHHHhccCC----CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEecCC
Confidence 344555555444 99999998754 344443 33457777766543
No 208
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=20.88 E-value=78 Score=28.97 Aligned_cols=74 Identities=7% Similarity=0.118 Sum_probs=53.8
Q ss_pred cCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEEeccCchhHHH
Q 017266 198 VLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFLSHCGWNSSIE 277 (374)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~e 277 (374)
..+.+..+.+.+++.....+.||.++.+. +-.++.++++...+-++|+. ||-..-...+.-
T Consensus 92 gtd~~Ra~dL~~af~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ 152 (371)
T 3tla_A 92 GTIKERAQEFNELVYNPDITCIMSTIGGD-----------------NSNSLLPFLDYDAIIANPKI--IIGYSDTTALLA 152 (371)
T ss_dssp SCHHHHHHHHHHHHTCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhhHHhCCcE--EEEechHHHHHH
Confidence 34567788899999888888899887651 12245566666666677877 998888888888
Q ss_pred Hhh--cCcccccccc
Q 017266 278 GLS--MGVPFLCWPY 290 (374)
Q Consensus 278 al~--~GvP~l~~P~ 290 (374)
|++ .|++.+-=|.
T Consensus 153 ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 153 GIYAKTGLITFYGPA 167 (371)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHHcCCEEEECcc
Confidence 776 5888777775
No 209
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.85 E-value=1.3e+02 Score=25.76 Aligned_cols=34 Identities=15% Similarity=-0.028 Sum_probs=26.6
Q ss_pred CcccEEEeCCch----------hHHHHHHHHhCCCeEEEeccch
Q 017266 23 EQISCVITDVTV----------GWALEIAEQMGIARAAVVTFAP 56 (374)
Q Consensus 23 ~~~D~iI~D~~~----------~~~~~~A~~lgiP~v~~~~~~~ 56 (374)
..+|++|+|... ....++|+.++.|++.+.....
T Consensus 125 ~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 125 RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 569999999842 2456899999999999876654
No 210
>2nrr_A Uvrabc system protein C; UVRC, endonuclase, NER, hydrolase; 1.20A {Thermotoga maritima}
Probab=20.76 E-value=2.6e+02 Score=22.04 Aligned_cols=42 Identities=12% Similarity=0.253 Sum_probs=25.0
Q ss_pred HHHHHHHHhHhcCCCCcccEEEeCCchh---HHHHHHHHhC--CCeEEE
Q 017266 8 CLKNFIEQVKESNDCEQISCVITDVTVG---WALEIAEQMG--IARAAV 51 (374)
Q Consensus 8 ~l~~ll~~l~~~~~~~~~D~iI~D~~~~---~~~~~A~~lg--iP~v~~ 51 (374)
.+++++.+--... +.||+|+.|.--. .+..+-+.+| ||++.+
T Consensus 65 ~M~Evl~RR~~r~--~~PDLilIDGGkgQl~aA~~vl~elg~~i~v~gl 111 (159)
T 2nrr_A 65 SIRTVVKRRYSKH--PLPNLLFVDGGIGQVNAAIEALKEIGKDCPVVGL 111 (159)
T ss_dssp HHHHHHHHHHTTS--CCCSEEEESSCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHhccC--CCCCEEEEeCCHHHHHHHHHHHHHcCCCccEEEE
Confidence 4555555543211 3599999999643 5555666777 454443
No 211
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=20.44 E-value=83 Score=28.04 Aligned_cols=28 Identities=18% Similarity=-0.129 Sum_probs=19.6
Q ss_pred ccEEEeCC--ch-hHHHHHHHHhCCCeEEEe
Q 017266 25 ISCVITDV--TV-GWALEIAEQMGIARAAVV 52 (374)
Q Consensus 25 ~D~iI~D~--~~-~~~~~~A~~lgiP~v~~~ 52 (374)
||+|++-. .. +.+..+|..+|+|++...
T Consensus 87 pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 117 (384)
T 1vgv_A 87 PDVVLVHGDTTTTLATSLAAFYQRIPVGHVE 117 (384)
T ss_dssp CSEEEEETTCHHHHHHHHHHHTTTCCEEEES
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 99999843 22 344556788899988653
No 212
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=20.35 E-value=40 Score=29.90 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=23.9
Q ss_pred hhCCCCCCcEEeccCchhHHHHhhc----Ccccccccc
Q 017266 257 VLGHPSVACFLSHCGWNSSIEGLSM----GVPFLCWPY 290 (374)
Q Consensus 257 lL~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 290 (374)
....+++ +|+-||-||+++++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999754 889988874
No 213
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=20.34 E-value=48 Score=30.60 Aligned_cols=36 Identities=22% Similarity=0.550 Sum_probs=26.7
Q ss_pred ChHHhhCCCCCCcEEeccCchhHHHHhhc----Cc-ccccccc
Q 017266 253 PQEKVLGHPSVACFLSHCGWNSSIEGLSM----GV-PFLCWPY 290 (374)
Q Consensus 253 pq~~lL~~~~~~~~I~HgG~~s~~eal~~----Gv-P~l~~P~ 290 (374)
+...+-..+++ +|+=||=||++.++.. ++ |+++++.
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 33445556777 9999999999998653 57 7888763
No 214
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=20.26 E-value=1.1e+02 Score=26.70 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=33.9
Q ss_pred chHHHHHHHHHhHhcCCCCcccEEEeCCchh--HHHHHHHHhCCCeE
Q 017266 5 MPGCLKNFIEQVKESNDCEQISCVITDVTVG--WALEIAEQMGIARA 49 (374)
Q Consensus 5 ~~~~l~~ll~~l~~~~~~~~~D~iI~D~~~~--~~~~~A~~lgiP~v 49 (374)
-...+.++++.+++.+ ..+|+++.... .+..+|+..|+|.+
T Consensus 217 s~~~l~~l~~~ik~~~----v~~if~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 217 TPDQISSLIEKLKVIK----PSALFVESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp CHHHHHHHHHHHHHSC----CSCEEEETTSCSHHHHHHHHHHCCCEE
T ss_pred CHHHHHHHHHHHHHcC----CCEEEEeCCCCcHHHHHHHHHhCCcEE
Confidence 3567888888888766 89999998765 56789999999988
No 215
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=20.19 E-value=2.4e+02 Score=22.94 Aligned_cols=53 Identities=11% Similarity=0.124 Sum_probs=38.4
Q ss_pred hhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHH
Q 017266 294 QYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG---IKANALKMKEMARK 350 (374)
Q Consensus 294 Q~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~---~~~~a~~l~~~~~~ 350 (374)
+..|+++-++ .|.-.++--.. .+.++|.+.+++=|.|+. .+..+.++.++.+.
T Consensus 126 ~~LN~~Ye~k-FGfpFVi~v~G---~s~~~IL~~l~~Rl~nd~e~E~~~Al~Ev~kIa~~ 181 (189)
T 3o7i_A 126 REGNARYEAR-FGRVFLIRAKG---RSGEEILQALTRRLQHTADEEVAEALAQLREITML 181 (189)
T ss_dssp HHHHHHHHHH-HSSCCCCCCTT---CCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCceEEecCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4558888888 48887776554 689999999988887654 66666666666544
No 216
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=20.14 E-value=36 Score=29.33 Aligned_cols=28 Identities=11% Similarity=0.276 Sum_probs=23.6
Q ss_pred CCCCCcEEeccCchhHHHHhhc---Cccccccc
Q 017266 260 HPSVACFLSHCGWNSSIEGLSM---GVPFLCWP 289 (374)
Q Consensus 260 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P 289 (374)
.+++ +|+=||=||+++++.. ++|+++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn 71 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFK 71 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEE
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEE
Confidence 4566 9999999999999876 78888886
No 217
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=20.07 E-value=2.5e+02 Score=22.18 Aligned_cols=53 Identities=9% Similarity=0.169 Sum_probs=38.0
Q ss_pred hhhhHHHHHhHhcceeEeecCCCCCcCHHHHHHHHHHHhcChH---HHHHHHHHHHHHHH
Q 017266 294 QYQNRNYICDAWKVGSQFFPDENGIITRQEIYNRVKALLNDDG---IKANALKMKEMARK 350 (374)
Q Consensus 294 Q~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~---~~~~a~~l~~~~~~ 350 (374)
+..|+++-++ .|.=.++--.. .+.++|.+++++=|.|+. .+..+.++.++.+.
T Consensus 101 ~~lN~~Ye~k-FGfpFvi~v~g---~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kIa~~ 156 (165)
T 2o8i_A 101 TQLNSAYTEK-FGFPFIIAVKG---LNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWL 156 (165)
T ss_dssp HHHHHHHHHH-HSSCCCCCCTT---CCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCeeEeeeCC---CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3458888888 48877776554 688899888887776653 66666666666554
No 218
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=20.04 E-value=3.3e+02 Score=21.55 Aligned_cols=142 Identities=13% Similarity=0.162 Sum_probs=72.6
Q ss_pred eEEEeecccccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCccccCCCchhhhhcCCCcEEEeecChHHhhCCCCCCcEE
Q 017266 188 VIYVAFGSAAVLSQQQLEELALGLESLHQPFLWVVRPDFMNRSHAKLPDGFVERVSDRGKFVEWAPQEKVLGHPSVACFL 267 (374)
Q Consensus 188 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~viw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~lL~~~~~~~~I 267 (374)
.|-|-+||.. +....++....|+..+.++=..+-. ....|+.+.+ |. .=.....++.||
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S------aHR~p~~~~~----------~~---~~a~~~g~~ViI 63 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS------AHRTPKMMVQ----------FA---SEARERGINIII 63 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTSHHHHHH----------HH---HHTTTTTCCEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC------CcCCHHHHHH----------HH---HHHHhCCCcEEE
Confidence 4666677754 4567788888888888775433321 1234443311 11 001112233488
Q ss_pred eccCchhHHHHhh---cCcccccccchhhhh--hhH-HHHHhHhccee--Ee-ecCCCCCcCHHHHHHHHHHHhcChHHH
Q 017266 268 SHCGWNSSIEGLS---MGVPFLCWPYFVDQY--QNR-NYICDAWKVGS--QF-FPDENGIITRQEIYNRVKALLNDDGIK 338 (374)
Q Consensus 268 ~HgG~~s~~eal~---~GvP~l~~P~~~DQ~--~na-~~v~~~~g~G~--~l-~~~~~~~~~~~~l~~~i~~~l~~~~~~ 338 (374)
.=+|...-+-.+. .-+|+|.+|...... ..+ -.+.+ +=-|+ .. ..++.+..++.-+...|.. +.|++++
T Consensus 64 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~~l~ 141 (163)
T 3ors_A 64 AGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLS-IQNPSLV 141 (163)
T ss_dssp EEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCTHHH
T ss_pred EECCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHh-CCCHHHH
Confidence 8777643333332 457999999754321 111 22222 12232 21 1210001334444444432 3688899
Q ss_pred HHHHHHHHHHHHhh
Q 017266 339 ANALKMKEMARKSL 352 (374)
Q Consensus 339 ~~a~~l~~~~~~~~ 352 (374)
++.+.+++..++.+
T Consensus 142 ~kl~~~r~~~~~~v 155 (163)
T 3ors_A 142 EKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998888877643
Done!